TBLASTX 2.2.10 [Oct-19-2004]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 1724812.2.1
         (804 letters)

Database: MedicagoSativa_nucl_with_EST.fasta 
           7669 sequences; 3,745,706 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|CO512186.1|CO512186  s13dSG03A0800053_113886 Glandular tr...   121   1e-028

>gb|CO512186.1|CO512186 s13dSG03A0800053_113886 Glandular trichomes Medicago sativa cDNA,
           mRNA sequence
          Length = 602

 Score =  121 bits (258), Expect = 1e-028
 Identities = 46/78 (58%), Positives = 56/78 (71%)
 Frame = +3 / +1

                                                                       
Query: 45  LPDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWGD 224
           LPDGFL     RG VV W  Q  VLAHPS ACF+THCGWNS++E ++ GVPVV FP   D
Sbjct: 64  LPDGFLVETIERGKVVKWCLQVEVLAHPSVACFMTHCGWNSSMEAVSLGVPVVTFPSRAD 243

                             
Query: 225 QCTDAKFLVDELGMGVRL 278
           Q T+AKFL D  G+G+++
Sbjct: 244 QLTNAKFLADVYGIGIKM 297



  Database: MedicagoSativa_nucl_with_EST.fasta
    Posted date:  Feb 7, 2006  2:23 PM
  Number of letters in database: 3,745,706
  Number of sequences in database:  7669
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 5,948,430
Number of Sequences: 7669
Number of extensions: 82252
Number of successful extensions: 1091
Number of sequences better than 1.0e-020: 1
length of database: 1,248,568
effective HSP length: 42
effective length of database: 926,470
effective search space used: 208455750
frameshift window, decay const: 40,  0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)