TBLASTX 2.2.10 [Oct-19-2004]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 131537.2.628
         (1238 letters)

Database: MedicagoSativa_nucl_with_EST.fasta 
           7669 sequences; 3,745,706 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|CO512532.1|CO512532  s13dSG08C0200006_120990 Glandular tr...   215   1e-056

>gb|CO512532.1|CO512532 s13dSG08C0200006_120990 Glandular trichomes Medicago sativa cDNA,
            mRNA sequence
          Length = 579

 Score =  215 bits (463), Expect = 1e-056
 Identities = 85/101 (84%), Positives = 89/101 (88%)
 Frame = -2 / +1

                                                                        
Query: 1144 EXXKDENMAGEXXXTSGKWNGDAEDKGIXXSEDYRFYAISAEYPEFSNKDKTLVLQFSVK 965
            E  KDEN+AGE   TSG+WNGDA DKGI  SEDYRFYAISAE+PEFSNKD TLV QFSVK
Sbjct: 187  EWKKDENLAGEWNYTSGQWNGDANDKGIQTSEDYRFYAISAEFPEFSNKDNTLVFQFSVK 366

                                                     
Query: 964  HEQKLDCGGGYVKLLGGDVDQKKFGGDTSYSIMFGPDICGY 842
            HEQKLDCGGGY+KLL GDVDQKKFGGDT YSIMFGPDICGY
Sbjct: 367  HEQKLDCGGGYMKLLSGDVDQKKFGGDTPYSIMFGPDICGY 489




 Score = 80.8 bits (170), Expect(2) = 5e-023
 Identities = 40/64 (62%), Positives = 40/64 (62%)
 Frame = +3 / -2

                                                                        
Query: 954  FCSCFTENCSTRVLSLLLNSGYSAEMA*NL*XXXXXXXXXXXXPFHFPEVXXXSPAMFSS 1133
            FCSC TEN  T VLSLLLNSG SAEMA*NL*            PFH PEV   SPA FSS
Sbjct: 377  FCSCLTENWKTSVLSLLLNSGNSAEMA*NL*SSLV*IPLSLASPFH*PEV*FHSPAKFSS 198

                
Query: 1134 FXXS 1145
            F  S
Sbjct: 197  FFHS 186




 Score = 41.8 bits (85), Expect(2) = 5e-023
 Identities = 16/19 (84%), Positives = 18/19 (94%)
 Frame = +3 / -2

                              
Query: 846 PQISGPNIML*DVSPPNFF 902
           PQISGPN++L* VSPPNFF
Sbjct: 485 PQISGPNMIL*GVSPPNFF 429



  Database: MedicagoSativa_nucl_with_EST.fasta
    Posted date:  Feb 7, 2006  2:23 PM
  Number of letters in database: 3,745,706
  Number of sequences in database:  7669
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 10,243,750
Number of Sequences: 7669
Number of extensions: 150490
Number of successful extensions: 1369
Number of sequences better than 1.0e-020: 1
length of database: 1,248,568
effective HSP length: 43
effective length of database: 918,801
effective search space used: 339037569
frameshift window, decay const: 40,  0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)