TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Y13733
(1516 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BE558428.1|BE558428 HV_CEb0017J24f Hordeum vulgare seedl... 271 9e-093
gb|BE194442.1|BE194442 HVSMEh0085I24f Hordeum vulgare 5-45 ... 189 2e-088
gb|BI957446.1|BI957446 HVSMEn0009J16f Hordeum vulgare rachi... 225 3e-086
gb|BU995195.1|BU995195 HM09I05r HM Hordeum vulgare subsp. v... 275 2e-084
gb|BE216591.1|BE216591 HV_CEb0010O10f Hordeum vulgare seedl... 267 1e-081
gb|BQ763191.1|BQ763191 EBro02_SQ007_C15_R root, 3 week, hyd... 258 1e-079
gb|BE214468.1|BE214468 HV_CEb0003I17f Hordeum vulgare seedl... 234 1e-075
gb|AL507638.1|AL507638 AL507638 Hordeum vulgare Barke devel... 234 7e-074
gb|BQ469466.1|BQ469466 HM04O09r HM Hordeum vulgare subsp. v... 236 2e-073
gb|BE455755.3|BE455755 HVSMEg0019K10f Hordeum vulgare pre-a... 238 6e-073
gb|BF260353.3|BF260353 HVSMEf0021M09f Hordeum vulgare seedl... 232 2e-072
gb|BQ467847.1|BQ467847 HR01B24r HR Hordeum vulgare subsp. v... 232 1e-071
gb|BI958350.1|BI958350 HVSMEn0014I18f Hordeum vulgare rachi... 211 6e-070
gb|CK123411.1|CK123411 BES1824103p14 BES1824 Hordeum vulgar... 179 5e-067
gb|BQ660971.1|BQ660971 HM01F04w HM Hordeum vulgare subsp. v... 254 9e-067
gb|CB881341.1|CB881341 HM09I05w HM Hordeum vulgare subsp. v... 254 9e-067
gb|AL506219.1|AL506219 AL506219 Hordeum vulgare Barke devel... 192 3e-063
gb|BF065565.1|BF065565 HV_CEb0012M15f Hordeum vulgare seedl... 195 1e-060
gb|BI957127.1|BI957127 HVSMEn0007J20f Hordeum vulgare rachi... 232 5e-060
gb|CA019762.1|CA019762 HV13A16r HV Hordeum vulgare subsp. v... 192 1e-058
gb|BM373958.2|BM373958 EBma03_SQ003_D14_R maternal, 8 DPA, ... 198 4e-058
gb|CB858813.1|CB858813 HI08G13w HI Hordeum vulgare subsp. v... 221 8e-057
gb|BI957159.1|BI957159 HVSMEn0007N14f Hordeum vulgare rachi... 171 2e-055
gb|BQ468460.1|BQ468460 HM01F04T HM Hordeum vulgare subsp. v... 181 2e-055
emb|X92754.1|HVCADMRNA H.vulgare mRNA for cinnamyl alcohol ... 210 1e-053
gb|BU995486.1|BU995486 HM10G11r HM Hordeum vulgare subsp. v... 179 2e-053
gb|BU997581.1|BU997581 HI08G13r HI Hordeum vulgare subsp. v... 168 8e-052
gb|CB881629.1|CB881629 HM10G11w HM Hordeum vulgare subsp. v... 203 2e-051
gb|BQ661428.1|BQ661428 HM03H06u HM Hordeum vulgare subsp. v... 195 4e-049
gb|BF623534.2|BF623534 HVSMEa0002J16f Hordeum vulgare seedl... 101 7e-048
gb|BQ760493.1|BQ760493 EBro02_SQ005_D11_R root, 3 week, hyd... 155 2e-047
gb|CA014567.1|CA014567 HT11L08r HT Hordeum vulgare subsp. v... 101 1e-041
gb|BQ768318.1|BQ768318 EBro08_SQ011_J10_R root, 3 week, dro... 100 7e-041
gb|BU994106.1|BU994106 HM05M03r HM Hordeum vulgare subsp. v... 99 2e-040
gb|BQ661689.1|BQ661689 HM04O09u HM Hordeum vulgare subsp. v... 166 3e-040
gb|CK124014.1|CK124014 BES1824106h23 BES1824 Hordeum vulgar... 166 3e-040
gb|BE559002.2|BE559002 HV_CEb0022D12f Hordeum vulgare seedl... 99 7e-040
gb|AL510922.1|AL510922 AL510922 Hordeum vulgare Barke devel... 164 1e-039
gb|BF257384.2|BF257384 HVSMEf0012L22f Hordeum vulgare seedl... 92 1e-038
gb|BI957209.1|BI957209 HVSMEn0008C08f Hordeum vulgare rachi... 90 1e-037
gb|AL504684.1|AL504684 AL504684 Hordeum vulgare Barke roots... 96 5e-037
gb|BI951701.1|BI951701 HVSMEm0002B16f Hordeum vulgare green... 98 6e-037
gb|BQ758620.1|BQ758620 EBma07_SQ002_F09_R maternal, 21 DPA,... 147 1e-034
gb|BG300015.1|BG300015 HVSMEa0022P19f Hordeum vulgare seedl... 83 9e-034
gb|BG299988.1|BG299988 HVSMEa0022N15f Hordeum vulgare seedl... 101 1e-033
gb|CK125801.1|CK125801 BES1824110n12 BES1824 Hordeum vulgar... 89 2e-033
gb|AL450716.1|AL450716 AL450716 Hordeum vulgare Barke etiol... 88 4e-033
gb|BF620007.2|BF620007 HVSMEc0009P20f Hordeum vulgare seedl... 86 1e-032
gb|AL509635.1|AL509635 AL509635 Hordeum vulgare Barke devel... 140 2e-032
gb|BJ447037.1|BJ447037 BJ447037 K. Sato unpublished cDNA li... 100 9e-032
gb|AV926512.1|AV926512 AV926512 K. Sato unpublished cDNA li... 98 1e-031
gb|BJ465038.1|BJ465038 BJ465038 K. Sato unpublished cDNA li... 88 2e-031
gb|BG344700.2|BG344700 HVSMEg0015E05f Hordeum vulgare pre-a... 86 2e-031
gb|AV916085.1|AV916085 AV916085 K. Sato unpublished cDNA li... 93 5e-031
gb|AL504577.1|AL504577 AL504577 Hordeum vulgare Barke roots... 99 9e-031
gb|AL507629.1|AL507629 AL507629 Hordeum vulgare Barke devel... 133 2e-030
gb|BI951294.1|BI951294 HVSMEl0025G15f Hordeum vulgare spike... 133 2e-030
gb|BM096821.2|BM096821 EBma07_SQ001_M10_R maternal, 21 DPA,... 133 2e-030
gb|BQ763215.1|BQ763215 EBro02_SQ007_H14_R root, 3 week, hyd... 132 5e-030
gb|AV931399.1|AV931399 AV931399 K. Sato unpublished cDNA li... 75 5e-030
gb|BF617661.3|BF617661 HVSMEc0018J01f Hordeum vulgare seedl... 93 2e-029
gb|BF623988.2|BF623988 HVSMEa0008F16f Hordeum vulgare seedl... 89 3e-029
gb|BF257150.3|BF257150 HVSMEf0012A06f Hordeum vulgare seedl... 86 5e-029
gb|BJ449238.1|BJ449238 BJ449238 K. Sato unpublished cDNA li... 100 1e-028
gb|BI958905.1|BI958905 HVSMEn0017C09f Hordeum vulgare rachi... 89 2e-028
gb|BF255211.2|BF255211 HVSMEf0006E02f Hordeum vulgare seedl... 83 3e-028
gb|BI947283.1|BI947283 HVSMEl0005A06f Hordeum vulgare spike... 70 4e-028
gb|BF254987.2|BF254987 HVSMEf0005J24f Hordeum vulgare seedl... 78 7e-028
gb|AL503387.1|AL503387 AL503387 Hordeum vulgare Barke roots... 87 9e-028
gb|BF623721.2|BF623721 HVSMEa0005C09f Hordeum vulgare seedl... 89 1e-027
gb|BJ447263.1|BJ447263 BJ447263 K. Sato unpublished cDNA li... 92 2e-027
gb|BJ454765.1|BJ454765 BJ454765 K. Sato unpublished cDNA li... 92 2e-027
gb|BE214050.2|BE214050 HV_CEb0002A10f Hordeum vulgare seedl... 89 1e-026
gb|BF624454.2|BF624454 HVSMEa0016F14f Hordeum vulgare seedl... 88 2e-026
gb|CB879610.1|CB879610 HP02P10w HP Hordeum vulgare subsp. v... 90 2e-025
gb|BM368384.2|BM368384 EBed01_SQ002_P23_R endosperm, 6 DPA,... 80 3e-025
gb|CB876945.1|CB876945 HP02P10T HP Hordeum vulgare subsp. v... 74 9e-025
gb|BM370236.2|BM370236 EBro08_SQ003_H20_R root, 3 week, dro... 85 9e-025
gb|BJ473108.1|BJ473108 BJ473108 K. Sato unpublished cDNA li... 89 1e-024
gb|CB878272.1|CB878272 HP07O19T HP Hordeum vulgare subsp. v... 78 2e-024
gb|BF630114.2|BF630114 HVSMEb0008A03f Hordeum vulgare seedl... 89 4e-024
gb|BU995847.1|BU995847 HM11I22r HM Hordeum vulgare subsp. v... 89 1e-023
gb|CA020634.1|CA020634 HZ36O20r HZ Hordeum vulgare subsp. v... 89 1e-023
gb|BU980077.1|BU980077 HA18H11r HA Hordeum vulgare subsp. v... 89 1e-023
gb|BJ456704.1|BJ456704 BJ456704 K. Sato unpublished cDNA li... 75 1e-023
gb|CA019921.1|CA019921 HV13L15r HV Hordeum vulgare subsp. v... 74 3e-023
gb|BI957691.1|BI957691 HVSMEn0010L07f Hordeum vulgare rachi... 50 9e-023
gb|BI960551.1|BI960551 HVSMEn0025A03f Hordeum vulgare rachi... 84 1e-022
gb|BI955158.1|BI955158 HVSMEm0021K16f Hordeum vulgare green... 67 1e-022
gb|BU977917.1|BU977917 HA12E09r HA Hordeum vulgare subsp. v... 75 2e-022
gb|BF623160.2|BF623160 HVSMEa0014P12f Hordeum vulgare seedl... 89 4e-022
gb|CA025182.1|CA025182 HZ51H02r HZ Hordeum vulgare subsp. v... 65 8e-022
gb|BU978527.1|BU978527 HA13H23r HA Hordeum vulgare subsp. v... 79 4e-021
gb|BU999880.1|BU999880 HS17B20u HS Hordeum vulgare subsp. v... 75 8e-021
gb|BI777594.2|BI777594 EBro04_SQ001_L05_R root, 3 week, sal... 101 8e-021
gb|BI777453.2|BI777453 EBro04_SQ001_E09_R root, 3 week, sal... 101 8e-021
gb|BF259036.2|BF259036 HVSMEf0017H13f Hordeum vulgare seedl... 98 1e-020
gb|BJ545538.1|BJ545538 BJ545538 K. Sato unpublished cDNA li... 73 2e-020
gb|CA001190.1|CA001190 HS05A02u HS Hordeum vulgare subsp. v... 93 2e-019
gb|BF065362.2|BF065362 HV_CEb0012D17f Hordeum vulgare seedl... 87 3e-019
gb|BJ468794.1|BJ468794 BJ468794 K. Sato unpublished cDNA li... 96 5e-019
gb|AV836836.1|AV836836 AV836836 K. Sato unpublished cDNA li... 68 2e-018
gb|CA025064.1|CA025064 HZ51B21r HZ Hordeum vulgare subsp. v... 60 2e-018
gb|AL509755.1|AL509755 AL509755 Hordeum vulgare Barke devel... 75 2e-018
gb|BI949722.1|BI949722 HVSMEl0015I24f Hordeum vulgare spike... 93 3e-018
gb|BG310264.2|BG310264 HVSMEc0016L11f Hordeum vulgare seedl... 93 3e-018
gb|BQ458310.1|BQ458310 HA05J23r HA Hordeum vulgare subsp. v... 60 5e-018
gb|AV913778.1|AV913778 AV913778 K. Sato unpublished cDNA li... 92 9e-018
gb|AV921385.1|AV921385 AV921385 K. Sato unpublished cDNA li... 92 9e-018
gb|BI960471.1|BI960471 HVSMEn0024L10f Hordeum vulgare rachi... 91 1e-017
gb|AJ460180.1|AJ460180 AJ460180 S00002 Hordeum vulgare subs... 90 2e-017
gb|BE454565.3|BE454565 HVSMEh0094E10f Hordeum vulgare 5-45 ... 83 3e-017
gb|AV917273.1|AV917273 AV917273 K. Sato unpublished cDNA li... 86 3e-017
gb|AV922443.1|AV922443 AV922443 K. Sato unpublished cDNA li... 86 3e-017
gb|BF627817.2|BF627817 HVSMEb0005O02f Hordeum vulgare seedl... 89 6e-017
gb|BM443343.2|BM443343 EBro02_SQ003_K20_R root, 3 week, hyd... 89 6e-017
gb|BJ544020.1|BJ544020 BJ544020 K. Sato unpublished cDNA li... 73 6e-017
gb|BI948497.1|BI948497 HVSMEl0009N14f Hordeum vulgare spike... 89 8e-017
gb|BJ470641.1|BJ470641 BJ470641 K. Sato unpublished cDNA li... 89 8e-017
gb|CA026575.1|CA026575 HZ56E21r HZ Hordeum vulgare subsp. v... 89 8e-017
gb|BI957762.1|BI957762 HVSMEn0011B06f Hordeum vulgare rachi... 55 2e-016
gb|BF628744.2|BF628744 HVSMEb0007K23f Hordeum vulgare seedl... 87 3e-016
gb|BG299981.1|BG299981 HVSMEa0022N07f Hordeum vulgare seedl... 84 1e-015
gb|AV921205.1|AV921205 AV921205 K. Sato unpublished cDNA li... 84 2e-015
gb|BJ550107.1|BJ550107 BJ550107 K. Sato unpublished cDNA li... 72 9e-015
gb|BQ662843.1|BQ662843 HS04G20u HS Hordeum vulgare subsp. v... 75 2e-014
gb|BJ455039.1|BJ455039 BJ455039 K. Sato unpublished cDNA li... 75 2e-014
gb|CB881999.1|CB881999 HM11I22w HM Hordeum vulgare subsp. v... 73 2e-014
gb|CX662371.1|CX662371 EST 159 Expressed sequences from Bar... 77 3e-013
gb|BF621349.2|BF621349 HVSMEa0006J13f Hordeum vulgare seedl... 53 4e-013
gb|BE602616.3|BE602616 HVSMEh0100I13f Hordeum vulgare 5-45 ... 76 4e-013
gb|BQ753310.1|BQ753310 EBan01_SQ001_I10_R anther, yellow st... 76 4e-013
gb|BQ759606.1|BQ759606 EBpi03_SQ002_D17_R pistil, 4 DPA, no... 76 4e-013
gb|BJ549163.1|BJ549163 BJ549163 K. Sato unpublished cDNA li... 76 4e-013
gb|AL506332.1|AL506332 AL506332 Hordeum vulgare Barke devel... 60 5e-013
gb|BQ467844.1|BQ467844 HR01B18r HR Hordeum vulgare subsp. v... 76 6e-013
gb|BJ548462.1|BJ548462 BJ548462 K. Sato unpublished cDNA li... 76 6e-013
gb|BQ661200.1|BQ661200 HM02G09u HM Hordeum vulgare subsp. v... 75 8e-013
gb|CA010065.1|CA010065 HT11L08u HT Hordeum vulgare subsp. v... 75 1e-012
gb|BI956586.1|BI956586 HVSMEn0004E16f Hordeum vulgare rachi... 74 2e-012
gb|BQ661990.1|BQ661990 HR01B24u HR Hordeum vulgare subsp. v... 74 2e-012
gb|BU977918.1|BU977918 HA12E09u HA Hordeum vulgare subsp. v... 73 3e-012
gb|BQ761920.1|BQ761920 EBpi01_SQ005_D08_R pistil, 1 DPA, no... 70 4e-011
gb|CB880767.1|CB880767 HM07M03w HM Hordeum vulgare subsp. v... 70 4e-011
gb|CB877686.1|CB877686 HP05N08T HP Hordeum vulgare subsp. v... 69 7e-011
gb|AL501883.1|AL501883 AL501883 Hordeum vulgare Barke roots... 68 1e-010
gb|BU994127.1|BU994127 HM05N11r HM Hordeum vulgare subsp. v... 68 2e-010
gb|CB880789.1|CB880789 HM07N11w HM Hordeum vulgare subsp. v... 68 2e-010
gb|BQ761570.1|BQ761570 EBem10_SQ001_K03_R embryo, 2 Day ger... 64 2e-009
gb|BM097022.2|BM097022 EBpi07_SQ002_C11_R pistil, 12 DPA, n... 62 8e-009
gb|BI956152.1|BI956152 HVSMEm0025N07f Hordeum vulgare green... 60 4e-008
gb|BQ467644.1|BQ467644 HS04G20r HS Hordeum vulgare subsp. v... 60 4e-008
gb|CA004275.1|CA004275 HS17B20r HS Hordeum vulgare subsp. v... 60 4e-008
gb|CA012143.1|CA012143 HT04J04r HT Hordeum vulgare subsp. v... 60 4e-008
gb|CA014958.1|CA014958 HT12N15r HT Hordeum vulgare subsp. v... 40 2e-007
gb|BQ768475.1|BQ768475 EBro08_SQ011_G19_R root, 3 week, dro... 48 1e-006
gb|AL500806.1|AL500806 AL500806 Hordeum vulgare Barke roots... 54 2e-006
gb|BI956379.1|BI956379 HVSMEn0003A09f Hordeum vulgare rachi... 52 9e-006
gb|BF630320.3|BF630320 HVSMEb0008L19f Hordeum vulgare seedl... 37 0.001
gb|BE214416.2|BE214416 HV_CEb0003G07f Hordeum vulgare seedl... 37 0.001
gb|BE215378.1|BE215378 HV_CEb0006K05f Hordeum vulgare seedl... 28 0.009
gb|BF619996.2|BF619996 HVSMEc0009P09f Hordeum vulgare seedl... 28 0.039
gb|BE213985.3|BE213985 HV_CEb0001N07f Hordeum vulgare seedl... 39 0.088
gb|BG309331.2|BG309331 HVSMEc0007L18f Hordeum vulgare seedl... 38 0.17
gb|CA030260.1|CA030260 HX06I18r HX Hordeum vulgare subsp. v... 33 0.27
gb|BF622624.2|BF622624 HVSMEa0007G07f Hordeum vulgare seedl... 33 0.30
gb|BF618556.2|BF618556 HVSMEc0006C03f Hordeum vulgare seedl... 37 0.31
gb|BQ754199.1|BQ754199 EBca01_SQ003_C13_R carpel, pre-anthe... 37 0.31
gb|CK125480.1|CK125480 BES1824108k12 BES1824 Hordeum vulgar... 29 0.33
gb|CK125479.1|CK125479 BES1824108k11 BES1824 Hordeum vulgar... 29 0.34
gb|BU977101.1|BU977101 HA10N14r HA Hordeum vulgare subsp. v... 34 0.52
gb|BU977102.1|BU977102 HA10N14u HA Hordeum vulgare subsp. v... 34 0.52
gb|BQ463261.1|BQ463261 HI04J02r HI Hordeum vulgare subsp. v... 32 0.55
gb|BJ460562.1|BJ460562 BJ460562 K. Sato unpublished cDNA li... 34 0.65
gb|BG309881.1|BG309881 HVSMEc0013K17f Hordeum vulgare seedl... 26 0.66
gb|BM097131.2|BM097131 EBpi07_SQ002_I02_R pistil, 12 DPA, n... 34 0.67
gb|BJ453015.1|BJ453015 BJ453015 K. Sato unpublished cDNA li... 34 0.68
gb|BJ461265.1|BJ461265 BJ461265 K. Sato unpublished cDNA li... 34 0.68
gb|BQ463679.1|BQ463679 HG01B14r HG Hordeum vulgare subsp. v... 34 0.72
gb|BU996263.1|BU996263 HM13A22r HM Hordeum vulgare subsp. v... 34 0.72
gb|BU972886.1|BU972886 HB23A18r BC Hordeum vulgare subsp. v... 34 0.73
gb|BJ453724.1|BJ453724 BJ453724 K. Sato unpublished cDNA li... 34 0.76
gb|BF066150.3|BF066150 HV_CEb0014P20f Hordeum vulgare seedl... 34 0.77
gb|BM374007.2|BM374007 EBma03_SQ003_F22_R maternal, 8 DPA, ... 34 0.78
gb|BI957384.1|BI957384 HVSMEn0009E09f Hordeum vulgare rachi... 35 0.81
gb|BJ460274.1|BJ460274 BJ460274 K. Sato unpublished cDNA li... 34 0.84
gb|BJ452726.1|BJ452726 BJ452726 K. Sato unpublished cDNA li... 34 0.85
gb|AL510378.1|AL510378 AL510378 Hordeum vulgare Barke devel... 34 0.88
gb|BU989350.1|BU989350 HF21I01r HF Hordeum vulgare subsp. v... 25 0.92
gb|AL503701.1|AL503701 AL503701 Hordeum vulgare Barke roots... 35 1.1
gb|AL504129.1|AL504129 AL504129 Hordeum vulgare Barke roots... 35 1.1
gb|AL504484.1|AL504484 AL504484 Hordeum vulgare Barke roots... 35 1.1
gb|AL505626.1|AL505626 AL505626 Hordeum vulgare Barke roots... 35 1.1
gb|BF260127.1|BF260127 HVSMEf0021C22f Hordeum vulgare seedl... 35 1.1
gb|BF628396.2|BF628396 HVSMEb0003O18f Hordeum vulgare seedl... 35 1.1
gb|BG300842.1|BG300842 HVSMEb0018K03f Hordeum vulgare seedl... 35 1.1
gb|BE454456.2|BE454456 HVSMEh0094H24f Hordeum vulgare 5-45 ... 35 1.1
gb|BI951486.1|BI951486 HVSMEm0001B13f Hordeum vulgare green... 35 1.1
gb|BF064621.1|BF064621 HV_CEb0016E23f Hordeum vulgare seedl... 35 1.1
gb|BG414413.2|BG414413 HVSMEk0002G22f Hordeum vulgare testa... 35 1.1
gb|BQ460758.1|BQ460758 HA06A05r HA Hordeum vulgare subsp. v... 35 1.1
gb|BQ462673.1|BQ462673 HI01K15T HI Hordeum vulgare subsp. v... 35 1.1
gb|BQ462846.1|BQ462846 HI02D03r HI Hordeum vulgare subsp. v... 35 1.1
gb|BM100019.2|BM100019 EBes01_SQ004_O20_R embryo sac, 4-6 D... 35 1.1
gb|BU966965.1|BU966965 HB02O14r BC Hordeum vulgare subsp. v... 35 1.1
gb|BU967999.1|BU967999 HB06A23r BC Hordeum vulgare subsp. v... 35 1.1
gb|BU982407.1|BU982407 HA26H07r HA Hordeum vulgare subsp. v... 35 1.1
gb|BU986617.1|BU986617 HF12G16r HF Hordeum vulgare subsp. v... 35 1.1
gb|CA013436.1|CA013436 HT08H05r HT Hordeum vulgare subsp. v... 35 1.1
gb|CA026089.1|CA026089 HZ54F05r HZ Hordeum vulgare subsp. v... 35 1.1
gb|BI951110.1|BI951110 HVSMEl0024I08f Hordeum vulgare spike... 29 1.2
gb|BG344626.1|BG344626 HVSMEg0009N16f Hordeum vulgare pre-a... 28 1.3
gb|BM368585.2|BM368585 EBem08_SQ004_A13_R embryo, 40 DPA, n... 28 1.3
gb|CA027205.1|CA027205 HZ58D05r HZ Hordeum vulgare subsp. v... 30 1.4
gb|BU990662.1|BU990662 HF25L07r HF Hordeum vulgare subsp. v... 25 1.5
gb|BI952112.1|BI952112 HVSMEm0004K11f Hordeum vulgare green... 33 1.5
gb|CA024507.1|CA024507 HZ49H24r HZ Hordeum vulgare subsp. v... 25 1.6
gb|BU998066.1|BU998066 HI09O06r HI Hordeum vulgare subsp. v... 25 1.7
gb|CA024360.1|CA024360 HZ49B12r HZ Hordeum vulgare subsp. v... 27 1.7
gb|CA022617.1|CA022617 HZ43N17r HZ Hordeum vulgare subsp. v... 27 1.8
gb|BU997367.1|BU997367 HI07M11r HI Hordeum vulgare subsp. v... 26 1.8
gb|AL504810.1|AL504810 AL504810 Hordeum vulgare Barke roots... 25 2.0
gb|CA009629.1|CA009629 HU14K15r HU Hordeum vulgare subsp. v... 29 2.1
gb|AL510716.1|AL510716 AL510716 Hordeum vulgare Barke devel... 34 2.1
gb|BF619946.2|BF619946 HVSMEc0009M14f Hordeum vulgare seedl... 34 2.1
gb|BF616805.2|BF616805 HVSMEc0012M22f Hordeum vulgare seedl... 34 2.1
gb|BG417530.1|BG417530 HVSMEk0017P05f Hordeum vulgare testa... 34 2.1
gb|BF266193.2|BF266193 HV_CEa0014H01f Hordeum vulgare seedl... 34 2.1
gb|AJ434939.1|AJ434939 AJ434939 S00002 Hordeum vulgare subs... 34 2.1
gb|CA017883.1|CA017883 HV06K08r HV Hordeum vulgare subsp. v... 34 2.1
gb|CA021385.1|CA021385 HZ39P03r HZ Hordeum vulgare subsp. v... 34 2.1
gb|CA021446.1|CA021446 HZ40C04r HZ Hordeum vulgare subsp. v... 34 2.1
gb|CA023897.1|CA023897 HZ47L22r HZ Hordeum vulgare subsp. v... 34 2.1
gb|CA024161.1|CA024161 HZ48I14r HZ Hordeum vulgare subsp. v... 34 2.1
gb|CA031716.1|CA031716 HX10O19r HX Hordeum vulgare subsp. v... 34 2.1
gb|BI958434.1|BI958434 HVSMEn0014P10f Hordeum vulgare rachi... 29 2.2
gb|BI960584.1|BI960584 HVSMEn0025D02f Hordeum vulgare rachi... 27 2.3
gb|BM816860.1|BM816860 HB105D05_SK.ab1 HB Hordeum vulgare s... 34 2.9
gb|BJ448569.1|BJ448569 BJ448569 K. Sato unpublished cDNA li... 34 2.9
gb|BJ456291.1|BJ456291 BJ456291 K. Sato unpublished cDNA li... 34 2.9
gb|BU984313.1|BU984313 HF03J09r HF Hordeum vulgare subsp. v... 34 2.9
gb|BU997672.1|BU997672 HI08K20r HI Hordeum vulgare subsp. v... 34 2.9
gb|CA000617.1|CA000617 HS07N10u HS Hordeum vulgare subsp. v... 34 2.9
gb|AL505176.1|AL505176 AL505176 Hordeum vulgare Barke roots... 29 3.1
gb|CV058594.1|CV058594 BNEL39g1 Barley EST endosperm librar... 31 3.2
gb|BU980297.1|BU980297 HA20E06r HA Hordeum vulgare subsp. v... 29 3.2
gb|CA020389.1|CA020389 HZ36C11r HZ Hordeum vulgare subsp. v... 29 3.6
gb|CA030414.1|CA030414 HX06P20r HX Hordeum vulgare subsp. v... 29 3.7
gb|BF258657.2|BF258657 HVSMEf0016F09f Hordeum vulgare seedl... 33 4.0
gb|BG366293.1|BG366293 HVSMEi0006J16f Hordeum vulgare 20 DA... 33 4.0
gb|BI951355.1|BI951355 HVSMEl0025K05f Hordeum vulgare spike... 33 4.0
gb|BI951747.1|BI951747 HVSMEm0002I03f Hordeum vulgare green... 33 4.0
gb|BE558280.2|BE558280 HV_CEb0017B03f Hordeum vulgare seedl... 33 4.0
gb|BE456059.3|BE456059 HVSMEg0019J04f Hordeum vulgare pre-a... 33 4.0
gb|BE214928.3|BE214928 HV_CEb0005D09f Hordeum vulgare seedl... 33 4.0
gb|AV913129.1|AV913129 AV913129 K. Sato unpublished cDNA li... 33 4.0
gb|AV914630.1|AV914630 AV914630 K. Sato unpublished cDNA li... 33 4.0
gb|AV917894.1|AV917894 AV917894 K. Sato unpublished cDNA li... 33 4.0
gb|AV929175.1|AV929175 AV929175 K. Sato unpublished cDNA li... 33 4.0
gb|BQ469432.1|BQ469432 HM04L01r HM Hordeum vulgare subsp. v... 33 4.0
gb|BQ469550.1|BQ469550 HZ01C05r HZ Hordeum vulgare subsp. v... 33 4.0
gb|BQ472047.1|BQ472047 HV04E04r HV Hordeum vulgare subsp. v... 33 4.0
gb|BU971415.1|BU971415 HB17I17r BC Hordeum vulgare subsp. v... 33 4.0
gb|BU980934.1|BU980934 HA22C06r HA Hordeum vulgare subsp. v... 33 4.0
gb|BU996351.1|BU996351 HM13F07r HM Hordeum vulgare subsp. v... 33 4.0
gb|CA011747.1|CA011747 HT03H01r HT Hordeum vulgare subsp. v... 33 4.0
gb|CA012435.1|CA012435 HT05G19r HT Hordeum vulgare subsp. v... 33 4.0
gb|CA028941.1|CA028941 HZ63L04r HZ Hordeum vulgare subsp. v... 33 4.0
gb|CB877636.1|CB877636 HP05K11T HP Hordeum vulgare subsp. v... 33 4.0
gb|CV063705.1|CV063705 BNEL92c4 Barley EST endosperm librar... 33 4.0
gb|CK123396.1|CK123396 BES1824103n15 BES1824 Hordeum vulgar... 33 4.0
gb|CK123969.1|CK123969 BES1824106f05 BES1824 Hordeum vulgar... 33 4.0
gb|CK124777.1|CK124777 BES1824110f19 BES1824 Hordeum vulgar... 33 4.0
gb|CA011954.1|CA011954 HT04A06r HT Hordeum vulgare subsp. v... 33 4.0
gb|BF629404.2|BF629404 HVSMEb0012D10f Hordeum vulgare seedl... 28 4.1
gb|CA009022.1|CA009022 HU12O20r HU Hordeum vulgare subsp. v... 30 4.1
gb|CV061926.1|CV061926 BNEL74d8 Barley EST endosperm librar... 26 4.2
gb|BF624346.3|BF624346 HVSMEa0014C09f Hordeum vulgare seedl... 30 4.2
gb|CB883656.1|CB883656 HQ02O08w HQ Hordeum vulgare subsp. v... 26 4.2
gb|CV063531.1|CV063531 BNEL90d11 Barley EST endosperm libra... 26 4.2
gb|CV060691.1|CV060691 BNEL60a7 Barley EST endosperm librar... 26 4.2
gb|CV059596.1|CV059596 BNEL49h2 Barley EST endosperm librar... 26 4.2
gb|CV060904.1|CV060904 BNEL62f12 Barley EST endosperm libra... 26 4.3
gb|BQ469677.1|BQ469677 HZ01I11r HZ Hordeum vulgare subsp. v... 26 4.3
gb|AL505696.1|AL505696 AL505696 Hordeum vulgare Barke roots... 30 4.3
gb|BQ469717.1|BQ469717 HZ01K12r HZ Hordeum vulgare subsp. v... 26 4.3
gb|BQ470391.1|BQ470391 HX02N13r HX Hordeum vulgare subsp. v... 26 4.3
gb|CA027742.1|CA027742 HZ59O05r HZ Hordeum vulgare subsp. v... 26 4.4
gb|BM372396.2|BM372396 EBro03_SQ004_N11_R root, 3 week, wat... 30 4.4
gb|CA002239.1|CA002239 HS06O17r HS Hordeum vulgare subsp. v... 30 4.5
gb|CK122315.1|CK122315 BES1824102n12 BES1824 Hordeum vulgar... 29 4.7
gb|CB882706.1|CB882706 HL02J24w HL Hordeum vulgare subsp. v... 30 4.9
gb|BM443077.2|BM443077 EBro02_SQ002_H03_R root, 3 week, hyd... 30 5.1
gb|BU974222.1|BU974222 HB27E07r BC Hordeum vulgare subsp. v... 30 5.1
gb|BM443086.2|BM443086 EBro02_SQ002_I07_R root, 3 week, hyd... 30 5.2
gb|BQ465784.1|BQ465784 HU04K22r HU Hordeum vulgare subsp. v... 30 5.2
gb|BQ760933.1|BQ760933 EBro03_SQ003_O05_R root, 3 week, wat... 30 5.2
gb|BI953457.1|BI953457 HVSMEm0012M08f Hordeum vulgare green... 30 5.3
gb|AL503802.1|AL503802 AL503802 Hordeum vulgare Barke roots... 33 5.5
gb|AL504775.1|AL504775 AL504775 Hordeum vulgare Barke roots... 33 5.5
gb|BF627490.2|BF627490 HVSMEb0004P24f Hordeum vulgare seedl... 33 5.5
gb|BF629894.2|BF629894 HVSMEb0007D19f Hordeum vulgare seedl... 33 5.5
gb|BE194448.2|BE194448 HVSMEh0085J15f Hordeum vulgare 5-45 ... 33 5.5
gb|BE214247.1|BE214247 HV_CEb0002N10f Hordeum vulgare seedl... 33 5.5
gb|BE519763.1|BE519763 HV_CEb0021C06f Hordeum vulgare seedl... 33 5.5
gb|BI959681.1|BI959681 HVSMEn0020M09f Hordeum vulgare rachi... 33 5.5
gb|BI959831.1|BI959831 HVSMEn0021N14f Hordeum vulgare rachi... 33 5.5
gb|BG300724.2|BG300724 HVSMEb0018C13f Hordeum vulgare seedl... 33 5.5
gb|BF617197.3|BF617197 HVSMEc0014P08f Hordeum vulgare seedl... 33 5.5
gb|BF267611.3|BF267611 HV_CEa0018G15f Hordeum vulgare seedl... 33 5.5
gb|BJ448302.1|BJ448302 BJ448302 K. Sato unpublished cDNA li... 33 5.5
gb|BQ463829.1|BQ463829 HG01J02r HG Hordeum vulgare subsp. v... 33 5.5
gb|BQ468734.1|BQ468734 HM02C16r HM Hordeum vulgare subsp. v... 33 5.5
gb|BM377033.2|BM377033 EBem05_SQ003_O20_R embryo, 14 DPA, n... 33 5.5
gb|CA029559.1|CA029559 HZ65J02r HZ Hordeum vulgare subsp. v... 33 5.5
gb|CA030946.1|CA030946 HX08J12r HX Hordeum vulgare subsp. v... 33 5.5
gb|CB874927.1|CB874927 HX06L24w HX Hordeum vulgare subsp. v... 33 5.5
gb|CB881900.1|CB881900 HM11D19w HM Hordeum vulgare subsp. v... 33 5.5
gb|CV054672.1|CV054672 BNEL112a6 Barley EST endosperm libra... 33 5.5
gb|CV057525.1|CV057525 BNEL28h1 Barley EST endosperm librar... 33 5.5
gb|CV063516.1|CV063516 BNEL90b8 Barley EST endosperm librar... 33 5.5
emb|AJ312329.1|HVU312329 Hordeum vulgare partial dof171 gen... 33 5.5
gb|BQ764601.1|BQ764601 EBca01_SQ004_I08_R carpel, pre-anthe... 30 5.5
gb|AL507319.1|AL507319 AL507319 Hordeum vulgare Barke devel... 30 5.8
gb|AL505048.1|AL505048 AL505048 Hordeum vulgare Barke roots... 30 5.9
gb|CV053731.1|CV053731 BNEL102e9 Barley EST endosperm libra... 30 5.9
gb|BU998226.1|BU998226 HI10G07r HI Hordeum vulgare subsp. v... 28 5.9
gb|CB883325.1|CB883325 HQ01O06w HQ Hordeum vulgare subsp. v... 28 6.3
gb|BM817218.1|BM817218 HC03H10_T3.ab1 HC Hordeum vulgare su... 30 6.4
gb|CK123100.1|CK123100 BES1824102b16 BES1824 Hordeum vulgar... 29 6.7
gb|BF256210.3|BF256210 HVSMEf0009B22f Hordeum vulgare seedl... 30 7.0
gb|BF261857.2|BF261857 HV_CEa0002G15f Hordeum vulgare seedl... 29 7.1
gb|BM373575.2|BM373575 EBma04_SQ004_O23_R maternal, 10 DPA,... 28 7.3
gb|AL506924.1|AL506924 AL506924 Hordeum vulgare Barke devel... 32 7.5
gb|AL507715.1|AL507715 AL507715 Hordeum vulgare Barke devel... 32 7.5
gb|AL508225.1|AL508225 AL508225 Hordeum vulgare Barke devel... 32 7.5
gb|BF258201.1|BF258201 HVSMEf0015B09f Hordeum vulgare seedl... 32 7.5
gb|BG300527.1|BG300527 HVSMEb0017F23f Hordeum vulgare seedl... 32 7.5
gb|BG366374.1|BG366374 HVSMEi0006N12f Hordeum vulgare 20 DA... 32 7.5
gb|BI949261.1|BI949261 HVSMEl0013A21f Hordeum vulgare spike... 32 7.5
gb|BI952384.1|BI952384 HVSMEm0006C17f Hordeum vulgare green... 32 7.5
gb|BI957080.1|BI957080 HVSMEn0007F06f Hordeum vulgare rachi... 32 7.5
gb|BE216646.1|BE216646 HV_CEb0011B08f Hordeum vulgare seedl... 32 7.5
gb|BF261346.2|BF261346 HV_CEa0001A17f Hordeum vulgare seedl... 32 7.5
gb|BF267208.2|BF267208 HV_CEa0017E06f Hordeum vulgare seedl... 32 7.5
gb|BG417167.2|BG417167 HVSMEk0016J08f Hordeum vulgare testa... 32 7.5
gb|BQ460273.1|BQ460273 HA06L21r HA Hordeum vulgare subsp. v... 32 7.5
gb|BM377804.2|BM377804 EBem04_SQ004_D18_R embryo, 12 DPA, n... 32 7.5
gb|BM370457.2|BM370457 EBro08_SQ004_E15_R root, 3 week, dro... 32 7.5
gb|BU975877.1|BU975877 HB32J06r BC Hordeum vulgare subsp. v... 32 7.5
gb|BU986983.1|BU986983 HF13H17r HF Hordeum vulgare subsp. v... 32 7.5
gb|BU994335.1|BU994335 HM06L04r HM Hordeum vulgare subsp. v... 32 7.5
gb|BU997639.1|BU997639 HI08J05r HI Hordeum vulgare subsp. v... 32 7.5
gb|BU997976.1|BU997976 HI09J11r HI Hordeum vulgare subsp. v... 32 7.5
gb|CA012999.1|CA012999 HT07B14r HT Hordeum vulgare subsp. v... 32 7.5
gb|CA025731.1|CA025731 HZ52P19r HZ Hordeum vulgare subsp. v... 32 7.5
gb|CA030087.1|CA030087 HX06A20r HX Hordeum vulgare subsp. v... 32 7.5
gb|BJ550231.1|BJ550231 BJ550231 K. Sato unpublished cDNA li... 32 7.5
gb|CV055889.1|CV055889 BNEL124e9 Barley EST endosperm libra... 32 7.5
gb|CV064045.1|CV064045 BNEL96g12 Barley EST endosperm libra... 32 7.5
gb|BM442874.2|BM442874 EBro02_SQ001_K14_R root, 3 week, hyd... 30 7.7
gb|CA025460.1|CA025460 HZ52D18r HZ Hordeum vulgare subsp. v... 27 8.1
gb|BU989105.1|BU989105 HF19M15r HF Hordeum vulgare subsp. v... 29 8.5
gb|BM369794.2|BM369794 EBem07_SQ004_K04_R embryo, 28 DPA, n... 26 8.8
gb|BQ762618.1|BQ762618 EBro02_SQ004_A18_R root, 3 week, hyd... 30 8.8
gb|CV062216.1|CV062216 BNEL77f10 Barley EST endosperm libra... 29 9.0
gb|BI951980.1|BI951980 HVSMEm0004B12f Hordeum vulgare green... 29 9.1
gb|BF629487.2|BF629487 HVSMEb0012J22f Hordeum vulgare seedl... 28 9.2
gb|BI780094.2|BI780094 EBma08_SQ001_G06_R maternal, 28 DPA,... 30 9.4
gb|BI778786.2|BI778786 EBro01_SQ001_I01_R root, 3 week, hyd... 30 9.5
gb|BI953964.1|BI953964 HVSMEm0015J01f Hordeum vulgare green... 30 9.8
>gb|BE558428.1|BE558428 HV_CEb0017J24f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0017J24f, mRNA sequence
Length = 830
Score = 271 bits (587), Expect(2) = 4e-080
Identities = 119/176 (67%), Positives = 124/176 (70%)
Frame = -2 / -1
Query: 666 GFVSPKCFSGLYTVTPAHSSGAACSGARPAGIFTTNFWSTTMVEANPPCVGRPSV*TSLY 487
G +S KCFSGLYTVTPAHSSGAACSGA PAGIFTTNF STTM EA PPCVG PSV*TSLY
Sbjct: 599 GVISQKCFSGLYTVTPAHSSGAACSGASPAGIFTTNF*STTMAEAKPPCVGLPSV*TSLY 420
Query: 486 DQIFLLQYCSTLALQGLHSRQHXXXXXXXXXXXXPYLAXXXXXXXXXXXXXXXXTIGYFE 307
DQIFLLQYCST AL G SRQH YL T+GY E
Sbjct: 419 DQIFLLQYCSTFALHGRQSRQHPTITPTPTTSPTRYLLTSGPTSTTSPTTSCPGTMGYLE 240
Query: 306 APRWFLAWWMSVWQIPQ*STFTTTSSGPVFLRV*E*GERCPVASLAAHPTTFLSDA 139
APR FL WWMSVWQ+PQ TF TTSSGPVFLRV *GER PVASLAAHP T +S+A
Sbjct: 239 APRSFLTWWMSVWQMPQYLTFNTTSSGPVFLRVYV*GERWPVASLAAHPVTVVSEA 72
Score = 196 bits (422), Expect(3) = 9e-093
Identities = 76/82 (92%), Positives = 77/82 (93%)
Frame = +2 / +1
Query: 422 CCRECSPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASTMVVDQKFVVKIPAGLAPEQA 601
CCR+C PCKANVEQYCNKKIWSYNDVYTDGRPTQGGFAS MVVDQKFVVKIPAGLAPEQA
Sbjct: 355 CCRDCRPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASAMVVDQKFVVKIPAGLAPEQA 534
Query: 602 APLLCAGVTVYSPLKHFGLTNP 667
APLLCAGVTVYSPLKHF L P
Sbjct: 535 APLLCAGVTVYSPLKHFWLMTP 600
Score = 133 bits (286), Expect(3) = 9e-093
Identities = 52/61 (85%), Positives = 54/61 (88%)
Frame = +2 / +1
Query: 140 ASERKVVGWAARDATGHLSPYSYTLRNTGPEDVVVKVLYCGICHTDIHQAKNHLGASKYP 319
ASE V GWAARDATGHLSPY+YTLR TGPEDVV+KV YCGICHTDIHQ KN LGASKYP
Sbjct: 73 ASETTVTGWAARDATGHLSPYTYTLRKTGPEDVVLKVKYCGICHTDIHQVKNDLGASKYP 252
Query: 320 M 322
M
Sbjct: 253 M 255
Score = 115 bits (245), Expect(3) = 4e-040
Identities = 48/67 (71%), Positives = 54/67 (80%)
Frame = -1 / -3
Query: 421 PNDHPDAYHVADAVLGHFGPDLHHLADHLVPRDHRIL*SPEVVLGLVDVRVADPAVEHLH 242
P+DHP A HVADAVL H PDLHHLA+HL+P DH IL S +VVL LVDVRVA+ AV +L
Sbjct: 354 PHDHPHADHVADAVLAHLRPDLHHLANHLMPWDHGILGSTQVVLDLVDVRVANAAVFNLQ 175
Query: 241 HHIFRAC 221
HHIFRAC
Sbjct: 174 HHIFRAC 154
Score = 104 bits (221), Expect(3) = 4e-041
Identities = 49/80 (61%), Positives = 54/80 (67%)
Frame = +1 / +3
Query: 421 VLPRVQPLQGQR*AVLQQEDLVIQRRLH*WTAHAGWIRLHHGRRPEVCGEDPXXXXXXXX 600
VLPR+ +QG+R AVLQQEDLV+QRRLH A A +RL HGRR EV GEDP
Sbjct: 354 VLPRLPAVQGERRAVLQQEDLVVQRRLHRRQADARRLRLRHGRRSEVRGEDPRRACAGAG 533
Query: 601 XXXXVRWRDGVQPAEALWAD 660
VR RDGVQPAEAL AD
Sbjct: 534 GAAAVRGRDGVQPAEALLAD 593
Score = 72.5 bits (152), Expect(3) = 4e-041
Identities = 29/40 (72%), Positives = 33/40 (82%)
Frame = +1 / +3
Query: 214 QEHRP*RCGGEGALLRDLPHGHPPGQEPPRGFKVSYGPWA 333
QE+RP*RCG EG +LR LPHGHPPGQE P F+VS+GP A
Sbjct: 147 QENRP*RCGVEG*ILRHLPHGHPPGQERPGCFQVSHGPRA 266
Score = 59.3 bits (123), Expect(3) = 4e-040
Identities = 30/72 (41%), Positives = 34/72 (47%)
Frame = -3 / -2
Query: 635 CTPSRQRTXXXXXXXXXXXPGSSPQTSGRRPWWRRIHPAWAVHQXXXXXXXXXXXXXTAQ 456
CTPSR RT GSSP+TS RRPW RR A A + TA+
Sbjct: 568 CTPSRPRTAAAPPAPAQARRGSSPRTSDRRPWRRRSRLASACRRCRRRCTTRSSCCSTAR 389
Query: 455 RWPCRGCTRGST 420
R PC +RGST
Sbjct: 388 RSPCTAGSRGST 353
Score = 58.8 bits (122), Expect(3) = 4e-018
Identities = 25/37 (67%), Positives = 26/37 (70%)
Frame = -3 / -2
Query: 332 AQGP*DTLKPRGGSWPGGCPCGRSRSRAPSPPHLQGL 222
A GP DT K G S PGGCPCG+ RS PS PHLQGL
Sbjct: 265 ALGPWDTWKHPGRS*PGGCPCGKCRSI*PSTPHLQGL 155
Score = 52.8 bits (109), Expect(2) = 4e-008
Identities = 22/48 (45%), Positives = 22/48 (45%)
Frame = +3 / +2
Query: 222 QALKMWW*XXXXXXXXXXXXXXXXXXXXLQSILWSLGTRWSARWWRSG 365
QALKMW * L SI WS G RW ARWWRSG
Sbjct: 155 QALKMWC*RLNTAAFATRTSTRSRTTWVLPSIPWSQGMRWLARWWRSG 298
Score = 51.0 bits (105), Expect(3) = 9e-093
Identities = 21/30 (70%), Positives = 24/30 (80%)
Frame = +2 / +3
Query: 728 KAMGHHVTVISSSSKKRAEAMDHLGADAYL 817
K+MGHHVTVISS +KK A A+ HLGA YL
Sbjct: 660 KSMGHHVTVISSFNKKPARALGHLGAHQYL 749
Score = 48.7 bits (100), Expect(3) = 4e-018
Identities = 16/23 (69%), Positives = 21/23 (91%)
Frame = -1 / -3
Query: 574 DLHHKLLVDDHGGGESTLRGPSI 506
DLHH+LL+DDHGGGE+ LR P++
Sbjct: 507 DLHHELLIDDHGGGEAALRRPAV 439
Score = 47.8 bits (98), Expect(2) = 4e-080
Identities = 22/34 (64%), Positives = 23/34 (67%)
Frame = -2 / -2
Query: 822 LTRYASAPRWSIASARFLDDELITVTWWPMALAT 721
L RY APRW A A FL +ELITVTW PM L T
Sbjct: 754 LRRYWWAPRWPRARAGFLLNELITVTWCPMDLPT 653
Score = 30.9 bits (61), Expect(3) = 4e-041
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +1 / +2
Query: 727 QGHGPPRDGDQLVVQE 774
Q HG PRDGDQLV Q+
Sbjct: 659 QIHGAPRDGDQLVQQK 706
Score = 29.9 bits (59), Expect(3) = 4e-040
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = -1 / -1
Query: 763 RADHRHVVAHGLGY 722
RADHRHVV HG +
Sbjct: 695 RADHRHVVPHGFAH 654
Score = 27.6 bits (54), Expect(3) = 4e-018
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = -3 / -3
Query: 764 TS*SPSRGGPW 732
TS*SPSRG PW
Sbjct: 696 TS*SPSRGAPW 664
Score = 25.4 bits (49), Expect(2) = 4e-008
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +3 / +2
Query: 474 RRSGHTTTSTLMDGPRR 524
RRSG TTTST G R+
Sbjct: 407 RRSGRTTTSTPTAGRRK 457
>gb|BE194442.1|BE194442 HVSMEh0085I24f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0085I24f, mRNA sequence
Length = 860
Score = 189 bits (407), Expect(2) = 2e-088
Identities = 74/80 (92%), Positives = 75/80 (93%)
Frame = +2 / +1
Query: 428 RECSPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASTMVVDQKFVVKIPAGLAPEQAAP 607
R+C PCKANVEQYCN KIWSYNDVYTDGRPTQGGFAS MVVDQKFVVKIPAGLAPEQAAP
Sbjct: 1 RDCRPCKANVEQYCNNKIWSYNDVYTDGRPTQGGFASAMVVDQKFVVKIPAGLAPEQAAP 180
Query: 608 LLCAGVTVYSPLKHFGLTNP 667
LLCAGVTVYSPLKHFGL P
Sbjct: 181 LLCAGVTVYSPLKHFGLMTP 240
Score = 161 bits (346), Expect(2) = 6e-072
Identities = 67/79 (84%), Positives = 68/79 (86%)
Frame = -2 / -1
Query: 666 GFVSPKCFSGLYTVTPAHSSGAACSGARPAGIFTTNFWSTTMVEANPPCVGRPSV*TSLY 487
G +SPKCFSGLYTVTPAHSSGAACSGA PAGIFTTNF STTM EA PPCVG PSV*TSLY
Sbjct: 239 GVISPKCFSGLYTVTPAHSSGAACSGASPAGIFTTNF*STTMAEAKPPCVGLPSV*TSLY 60
Query: 486 DQIFLLQYCSTLALQGLHS 430
DQI LLQYCST AL G S
Sbjct: 59 DQILLLQYCSTFALHGRQS 3
Score = 158 bits (339), Expect(2) = 2e-088
Identities = 73/129 (56%), Positives = 82/129 (63%)
Frame = +2 / +1
Query: 725 AKAMGHHVTVISSSSKKRAEAMDHLGADAYLVXXXXXXXXXXXXXXXYIIDTVPVHHPLE 904
AK+MGHHVTVISSS+KKRAEA+D LGAD YLV YIIDTVPV HPLE
Sbjct: 298 AKSMGHHVTVISSSNKKRAEAVDDLGADEYLVSSDADQMAAAADSLDYIIDTVPVKHPLE 477
Query: 905 PYXXXXXXXXXXXXXXXIGEPLSFVSPMVMLGRKAITGSFIGSIDETAEVLQFCVDKGLT 1084
PY I EPL+FVSPM MLGRK ITGSF+GS+DET E +F ++G T
Sbjct: 478 PYLALLKMDGKLVLMGVIAEPLNFVSPMGMLGRKTITGSFLGSLDETEEGPKFWFEQGAT 657
Query: 1085 SQIEVVKMG 1111
Q VK G
Sbjct: 658 LQNGGVKNG 684
Score = 131 bits (280), Expect(2) = 6e-072
Identities = 66/131 (50%), Positives = 71/131 (54%)
Frame = -2 / -1
Query: 1110 PILTTSIWEVSPLSTQN*STSAVSSMLPMKLPVMAFRPSITMGDTKLRGXXXXXXXXXXX 931
P LT +V+P S QN S+VSS LP KLPVM F PSI +GDTKL G
Sbjct: 683 PFLTPPFCKVAPCSNQNLGPSSVSSRLPRKLPVMVFLPSIPIGDTKLSGSAITPISTSLP 504
Query: 930 XXXXXXXXXXSGWCTGTVXXXXXXXXXXXXXXXXXELTRYASAPRWSIASARFLDDELIT 751
SG TGTV ELTRY+SAPR S ASARFL DELIT
Sbjct: 503 SILSSAR*GSSGCFTGTVSMM*SSESAAAAIWSASELTRYSSAPRSSTASARFLLDELIT 324
Query: 750 VTWWPMALATF 718
VTWWPM LATF
Sbjct: 323 VTWWPMDLATF 291
Score = 96.4 bits (204), Expect(2) = 6e-025
Identities = 46/77 (59%), Positives = 51/77 (66%)
Frame = +1 / +3
Query: 430 RVQPLQGQR*AVLQQEDLVIQRRLH*WTAHAGWIRLHHGRRPEVCGEDPXXXXXXXXXXX 609
R+ +QG+R AVLQQ DLV+QRRLH A AG +RL HGRR EV GEDP
Sbjct: 3 RLPAVQGERRAVLQQ*DLVVQRRLHRRQADAGRLRLRHGRRSEVRGEDPRRACAGAGGAA 182
Query: 610 XVRWRDGVQPAEALWAD 660
VR RDGVQPAEAL AD
Sbjct: 183 AVRGRDGVQPAEALRAD 233
Score = 71.2 bits (149), Expect(3) = 2e-028
Identities = 30/51 (58%), Positives = 34/51 (66%)
Frame = -1 / -3
Query: 1084 GEPLVDAELKHLSGLVDAADEAPRDGLPPQHHHGRHEAQGLADDAQQHELA 932
G PL EL+ L LV A ++APRDGLPPQH H HE + L D A QHELA
Sbjct: 657 GSPLFKPELRTLLRLVQAPEKAPRDGLPPQHPHWGHEVERLRDHAHQHELA 505
Score = 56.5 bits (117), Expect(3) = 2e-028
Identities = 28/69 (40%), Positives = 32/69 (46%)
Frame = -3 / -2
Query: 635 CTPSRQRTXXXXXXXXXXXPGSSPQTSGRRPWWRRIHPAWAVHQXXXXXXXXXXXXXTAQ 456
CTPSR RT GSSP+TS RRPW RR PA A + TA+
Sbjct: 208 CTPSRPRTAAAPPAPAQARRGSSPRTSDRRPWRRRSRPASACRRCRRRCTTRSYCCSTAR 29
Query: 455 RWPCRGCTR 429
R PC +R
Sbjct: 28 RSPCTAGSR 2
Score = 48.7 bits (100), Expect(3) = 5e-010
Identities = 16/23 (69%), Positives = 21/23 (91%)
Frame = -1 / -3
Query: 574 DLHHKLLVDDHGGGESTLRGPSI 506
DLHH+LL+DDHGGGE+ LR P++
Sbjct: 147 DLHHELLIDDHGGGEAALRRPAV 79
Score = 43.2 bits (88), Expect(3) = 2e-028
Identities = 22/47 (46%), Positives = 24/47 (51%)
Frame = -1 / -3
Query: 784 LRALLGRRADHRHVVAHGLGYLXXXXXXXXXXXXXXXXARVRQPKVL 644
L LL RADHRHVVAHGLG+L A QP+VL
Sbjct: 357 LGPLLVGRADHRHVVAHGLGHLHAHVAHAAQAQDPAAEAGGHQPEVL 217
Score = 38.6 bits (78), Expect(2) = 6e-025
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = +1 / +3
Query: 727 QGHGPPRDGDQLVVQEA 777
Q HGPPRDGDQLV QEA
Sbjct: 300 QVHGPPRDGDQLVQQEA 350
Score = 36.8 bits (74), Expect(3) = 5e-010
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = -3 / -2
Query: 776 ASWTTS*SPSRGGPWPW 726
AS TS*SPSRGGPW W
Sbjct: 349 ASCWTS*SPSRGGPWTW 299
Score = 21.7 bits (41), Expect(3) = 5e-010
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = -1 / -3
Query: 298 VVLGLVDVRVADPAV 254
+V L+DVR+A PAV
Sbjct: 48 IVAVLLDVRLARPAV 4
>gb|BI957446.1|BI957446 HVSMEn0009J16f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0009J16f,
mRNA sequence
Length = 646
Score = 225 bits (486), Expect(2) = 3e-086
Identities = 100/144 (69%), Positives = 106/144 (73%)
Frame = +2 / +2
Query: 725 AKAMGHHVTVISSSSKKRAEAMDHLGADAYLVXXXXXXXXXXXXXXXYIIDTVPVHHPLE 904
AK+MGHHVTVISSS+KKRAEA+D LGAD YLV YIIDTVPV HPLE
Sbjct: 212 AKSMGHHVTVISSSNKKRAEAVDDLGADEYLVSSDADQMAAAADSLDYIIDTVPVKHPLE 391
Query: 905 PYXXXXXXXXXXXXXXXIGEPLSFVSPMVMLGRKAITGSFIGSIDETAEVLQFCVDKGLT 1084
PY I EPLSFVSPMVMLGRK ITGSFIGS+DET EVL+FCVDKGLT
Sbjct: 392 PYLALLKMDGKLVLMGVIAEPLSFVSPMVMLGRKTITGSFIGSMDETEEVLKFCVDKGLT 571
Query: 1085 SQIEVVKMGYVNEALERLERNDVR 1156
SQIEVVKM YVN ALE+LERNDVR
Sbjct: 572 SQIEVVKMDYVNXALEKLERNDVR 643
Score = 155 bits (332), Expect(2) = 5e-065
Identities = 77/130 (59%), Positives = 80/130 (61%)
Frame = -2 / -2
Query: 1107 ILTTSIWEVSPLSTQN*STSAVSSMLPMKLPVMAFRPSITMGDTKLRGXXXXXXXXXXXX 928
ILTTSI EVSPLSTQN TS+VSSMLPMKLPVM F PSIT+GDTKL G
Sbjct: 594 ILTTSICEVSPLSTQNLRTSSVSSMLPMKLPVMVFLPSITIGDTKLSGSAITPISTSLPS 415
Query: 927 XXXXXXXXXSGWCTGTVXXXXXXXXXXXXXXXXXELTRYASAPRWSIASARFLDDELITV 748
SG TGTV ELTRY+SAPR S ASARFL DELITV
Sbjct: 414 ILSSAR*GSSGCFTGTVSMM*SSESAAAAIWSASELTRYSSAPRSSTASARFLLDELITV 235
Query: 747 TWWPMALATF 718
TWWPM LATF
Sbjct: 234 TWWPMDLATF 205
Score = 114 bits (244), Expect(2) = 3e-086
Identities = 47/51 (92%), Positives = 47/51 (92%)
Frame = +2 / +2
Query: 515 PTQGGFASTMVVDQKFVVKIPAGLAPEQAAPLLCAGVTVYSPLKHFGLTNP 667
PT GGFAS MVVDQKFVVKIPAGLAPEQAAPLLCAGVTVYSPLKHFGL P
Sbjct: 2 PTHGGFASAMVVDQKFVVKIPAGLAPEQAAPLLCAGVTVYSPLKHFGLMTP 154
Score = 114 bits (243), Expect(2) = 5e-065
Identities = 45/51 (88%), Positives = 46/51 (90%)
Frame = -2 / -2
Query: 666 GFVSPKCFSGLYTVTPAHSSGAACSGARPAGIFTTNFWSTTMVEANPPCVG 514
G +SPKCFSGLYTVTPAHSSGAACSGA PAGIFTTNF STTM EA PPCVG
Sbjct: 153 GVISPKCFSGLYTVTPAHSSGAACSGASPAGIFTTNF*STTMAEAKPPCVG 1
Score = 90.9 bits (192), Expect(3) = 1e-031
Identities = 38/51 (74%), Positives = 40/51 (78%)
Frame = -1 / -1
Query: 1084 GEPLVDAELKHLSGLVDAADEAPRDGLPPQHHHGRHEAQGLADDAQQHELA 932
GEPLVDAEL+ L LV A DEAPRDGLPPQHHH HEA+ L D A QHELA
Sbjct: 571 GEPLVDAELEDLLRLVHAPDEAPRDGLPPQHHHWGHEAERLRDHAHQHELA 419
Score = 59.3 bits (123), Expect(3) = 1e-020
Identities = 28/49 (57%), Positives = 29/49 (59%)
Frame = +1 / +1
Query: 514 AHAGWIRLHHGRRPEVCGEDPXXXXXXXXXXXXVRWRDGVQPAEALWAD 660
A A +RL HGRR EV GEDP VR RDGVQPAEAL AD
Sbjct: 1 ADARRLRLRHGRRSEVRGEDPRRACAGAGGAAAVRGRDGVQPAEALRAD 147
Score = 46.4 bits (95), Expect(3) = 1e-031
Identities = 19/35 (54%), Positives = 20/35 (57%)
Frame = -3 / -3
Query: 635 CTPSRQRTXXXXXXXXXXXPGSSPQTSGRRPWWRR 531
CTPSR RT GSSP+TS RRPW RR
Sbjct: 122 CTPSRPRTAAAPPAPAQARRGSSPRTSDRRPWRRR 18
Score = 45.5 bits (93), Expect(3) = 1e-020
Identities = 19/27 (70%), Positives = 20/27 (74%)
Frame = +1 / +1
Query: 1027 RQHRRDR*GASVLRRQGAHLPDRGGQD 1107
R+H RD G VLRRQGAHL DRG QD
Sbjct: 514 REHGRDGGGPQVLRRQGAHLADRGRQD 594
Score = 43.2 bits (88), Expect(2) = 9e-008
Identities = 14/19 (73%), Positives = 18/19 (94%)
Frame = -1 / -1
Query: 574 DLHHKLLVDDHGGGESTLR 518
DLHH+LL+DDHGGGE+ +R
Sbjct: 61 DLHHELLIDDHGGGEAAVR 5
Score = 43.2 bits (88), Expect(3) = 1e-031
Identities = 22/47 (46%), Positives = 24/47 (51%)
Frame = -1 / -1
Query: 784 LRALLGRRADHRHVVAHGLGYLXXXXXXXXXXXXXXXXARVRQPKVL 644
L LL RADHRHVVAHGLG+L A QP+VL
Sbjct: 271 LGPLLVGRADHRHVVAHGLGHLHAHVAHAAQAQDPAAEAGGHQPEVL 131
Score = 38.6 bits (78), Expect(3) = 1e-020
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = +1 / +1
Query: 727 QGHGPPRDGDQLVVQEA 777
Q HGPPRDGDQLV QEA
Sbjct: 214 QVHGPPRDGDQLVQQEA 264
Score = 36.8 bits (74), Expect(2) = 9e-008
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = -3 / -3
Query: 776 ASWTTS*SPSRGGPWPW 726
AS TS*SPSRGGPW W
Sbjct: 263 ASCWTS*SPSRGGPWTW 213
>gb|BU995195.1|BU995195 HM09I05r HM Hordeum vulgare subsp. vulgare cDNA clone HM09I05
5-PRIME, mRNA sequence
Length = 622
Score = 275 bits (595), Expect = 4e-073
Identities = 120/176 (68%), Positives = 125/176 (71%)
Frame = -2 / -1
Query: 666 GFVSPKCFSGLYTVTPAHSSGAACSGARPAGIFTTNFWSTTMVEANPPCVGRPSV*TSLY 487
G +SPKCFSGLYTVTPAHSSGAACSGA PAGIFTTNF STTM EA PPCVG PSV*TSLY
Sbjct: 577 GVISPKCFSGLYTVTPAHSSGAACSGASPAGIFTTNF*STTMAEAKPPCVGLPSV*TSLY 398
Query: 486 DQIFLLQYCSTLALQGLHSRQHXXXXXXXXXXXXPYLAXXXXXXXXXXXXXXXXTIGYFE 307
DQIFLLQYCST AL G SRQH YL T+GY E
Sbjct: 397 DQIFLLQYCSTFALHGRQSRQHPTITPTPTTSPTRYLLTSGPTSTTSPTTSCPGTMGYLE 218
Query: 306 APRWFLAWWMSVWQIPQ*STFTTTSSGPVFLRV*E*GERCPVASLAAHPTTFLSDA 139
APR FL WWMSVWQ+PQ TF TTSSGPVFLRV *GER PVASLAAHP T +S+A
Sbjct: 217 APRSFLTWWMSVWQMPQYLTFNTTSSGPVFLRVYV*GERWPVASLAAHPVTVVSEA 50
Score = 199 bits (430), Expect(2) = 2e-084
Identities = 77/82 (93%), Positives = 78/82 (95%)
Frame = +2 / +3
Query: 422 CCRECSPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASTMVVDQKFVVKIPAGLAPEQA 601
CCR+C PCKANVEQYCNKKIWSYNDVYTDGRPTQGGFAS MVVDQKFVVKIPAGLAPEQA
Sbjct: 333 CCRDCRPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASAMVVDQKFVVKIPAGLAPEQA 512
Query: 602 APLLCAGVTVYSPLKHFGLTNP 667
APLLCAGVTVYSPLKHFGL P
Sbjct: 513 APLLCAGVTVYSPLKHFGLMTP 578
Score = 133 bits (286), Expect(2) = 2e-084
Identities = 52/61 (85%), Positives = 54/61 (88%)
Frame = +2 / +3
Query: 140 ASERKVVGWAARDATGHLSPYSYTLRNTGPEDVVVKVLYCGICHTDIHQAKNHLGASKYP 319
ASE V GWAARDATGHLSPY+YTLR TGPEDVV+KV YCGICHTDIHQ KN LGASKYP
Sbjct: 51 ASETTVTGWAARDATGHLSPYTYTLRKTGPEDVVLKVKYCGICHTDIHQVKNDLGASKYP 230
Query: 320 M 322
M
Sbjct: 231 M 233
Score = 115 bits (245), Expect(2) = 5e-038
Identities = 48/67 (71%), Positives = 54/67 (80%)
Frame = -1 / -3
Query: 421 PNDHPDAYHVADAVLGHFGPDLHHLADHLVPRDHRIL*SPEVVLGLVDVRVADPAVEHLH 242
P+DHP A HVADAVL H PDLHHLA+HL+P DH IL S +VVL LVDVRVA+ AV +L
Sbjct: 332 PHDHPHADHVADAVLAHLRPDLHHLANHLMPWDHGILGSTQVVLDLVDVRVANAAVFNLQ 153
Query: 241 HHIFRAC 221
HHIFRAC
Sbjct: 152 HHIFRAC 132
Score = 107 bits (228), Expect(2) = 3e-038
Identities = 50/80 (62%), Positives = 55/80 (68%)
Frame = +1 / +2
Query: 421 VLPRVQPLQGQR*AVLQQEDLVIQRRLH*WTAHAGWIRLHHGRRPEVCGEDPXXXXXXXX 600
VLPR+ +QG+R AVLQQEDLV+QRRLH A AG +RL HGRR EV GEDP
Sbjct: 332 VLPRLPAVQGERRAVLQQEDLVVQRRLHRRQADAGRLRLRHGRRSEVRGEDPRRACAGAG 511
Query: 601 XXXXVRWRDGVQPAEALWAD 660
VR RDGVQPAEAL AD
Sbjct: 512 GAAAVRGRDGVQPAEALRAD 571
Score = 72.5 bits (152), Expect(2) = 3e-038
Identities = 29/40 (72%), Positives = 33/40 (82%)
Frame = +1 / +2
Query: 214 QEHRP*RCGGEGALLRDLPHGHPPGQEPPRGFKVSYGPWA 333
QE+RP*RCG EG +LR LPHGHPPGQE P F+VS+GP A
Sbjct: 125 QENRP*RCGVEG*ILRHLPHGHPPGQERPGCFQVSHGPRA 244
Score = 63.8 bits (133), Expect(2) = 5e-038
Identities = 31/72 (43%), Positives = 35/72 (48%)
Frame = -3 / -2
Query: 635 CTPSRQRTXXXXXXXXXXXPGSSPQTSGRRPWWRRIHPAWAVHQXXXXXXXXXXXXXTAQ 456
CTPSR RT GSSP+TS RRPW RR PA A + TA+
Sbjct: 546 CTPSRPRTAAAPPAPAQARRGSSPRTSDRRPWRRRSRPASACRRCRRRCTTRSSCCSTAR 367
Query: 455 RWPCRGCTRGST 420
R PC +RGST
Sbjct: 366 RSPCTAGSRGST 331
Score = 58.8 bits (122), Expect(2) = 7e-016
Identities = 25/37 (67%), Positives = 26/37 (70%)
Frame = -3 / -2
Query: 332 AQGP*DTLKPRGGSWPGGCPCGRSRSRAPSPPHLQGL 222
A GP DT K G S PGGCPCG+ RS PS PHLQGL
Sbjct: 243 ALGPWDTWKHPGRS*PGGCPCGKCRSI*PSTPHLQGL 133
Score = 52.8 bits (109), Expect(2) = 1e-008
Identities = 22/48 (45%), Positives = 22/48 (45%)
Frame = +3 / +1
Query: 222 QALKMWW*XXXXXXXXXXXXXXXXXXXXLQSILWSLGTRWSARWWRSG 365
QALKMW * L SI WS G RW ARWWRSG
Sbjct: 133 QALKMWC*RLNTAAFATRTSTRSRTTWVLPSIPWSQGMRWLARWWRSG 276
Score = 48.7 bits (100), Expect(2) = 7e-016
Identities = 16/23 (69%), Positives = 21/23 (91%)
Frame = -1 / -3
Query: 574 DLHHKLLVDDHGGGESTLRGPSI 506
DLHH+LL+DDHGGGE+ LR P++
Sbjct: 485 DLHHELLIDDHGGGEAALRRPAV 417
Score = 26.7 bits (52), Expect(2) = 1e-008
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = +3 / +1
Query: 474 RRSGHTTTSTLMDGPRR 524
RRSG TTTST G RR
Sbjct: 385 RRSGRTTTSTPTAGRRR 435
>gb|BE216591.1|BE216591 HV_CEb0010O10f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0010O10f, mRNA sequence
Length = 740
Score = 267 bits (578), Expect = 9e-071
Identities = 117/176 (66%), Positives = 124/176 (70%)
Frame = -2 / -2
Query: 666 GFVSPKCFSGLYTVTPAHSSGAACSGARPAGIFTTNFWSTTMVEANPPCVGRPSV*TSLY 487
G +S KCF+GLYTVTPAHSSGAACSGA PAGIF+TNF STTM EA PPCVG PSV*TSLY
Sbjct: 613 GVISLKCFNGLYTVTPAHSSGAACSGASPAGIFSTNF*STTMAEAKPPCVGLPSV*TSLY 434
Query: 486 DQIFLLQYCSTLALQGLHSRQHXXXXXXXXXXXXPYLAXXXXXXXXXXXXXXXXTIGYFE 307
DQIFLLQYCST AL G SRQH YL T+GY E
Sbjct: 433 DQIFLLQYCSTFALHGRQSRQHPTITPTPTTSPTRYLLTSGPTSTTSPTTSCPGTMGYLE 254
Query: 306 APRWFLAWWMSVWQIPQ*STFTTTSSGPVFLRV*E*GERCPVASLAAHPTTFLSDA 139
APR FL WWMSVWQ+PQ TF TTSSGPVFLRV *GER PVASLAAHP T +S+A
Sbjct: 253 APRSFLTWWMSVWQMPQYLTFNTTSSGPVFLRVYV*GERWPVASLAAHPVTVVSEA 86
Score = 190 bits (410), Expect(2) = 1e-081
Identities = 74/82 (90%), Positives = 75/82 (91%)
Frame = +2 / +3
Query: 422 CCRECSPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASTMVVDQKFVVKIPAGLAPEQA 601
CCR+C PCKANVEQYCNKKIWSYNDVYTDGRPTQGGFAS MVVDQKFV KIPAGLAPEQA
Sbjct: 369 CCRDCRPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASAMVVDQKFVEKIPAGLAPEQA 548
Query: 602 APLLCAGVTVYSPLKHFGLTNP 667
APLLCAGVTVYSPLKH L P
Sbjct: 549 APLLCAGVTVYSPLKHLRLMTP 614
Score = 133 bits (286), Expect(2) = 1e-081
Identities = 52/61 (85%), Positives = 54/61 (88%)
Frame = +2 / +3
Query: 140 ASERKVVGWAARDATGHLSPYSYTLRNTGPEDVVVKVLYCGICHTDIHQAKNHLGASKYP 319
ASE V GWAARDATGHLSPY+YTLR TGPEDVV+KV YCGICHTDIHQ KN LGASKYP
Sbjct: 87 ASETTVTGWAARDATGHLSPYTYTLRKTGPEDVVLKVKYCGICHTDIHQVKNDLGASKYP 266
Query: 320 M 322
M
Sbjct: 267 M 269
Score = 115 bits (245), Expect(2) = 5e-038
Identities = 48/67 (71%), Positives = 54/67 (80%)
Frame = -1 / -1
Query: 421 PNDHPDAYHVADAVLGHFGPDLHHLADHLVPRDHRIL*SPEVVLGLVDVRVADPAVEHLH 242
P+DHP A HVADAVL H PDLHHLA+HL+P DH IL S +VVL LVDVRVA+ AV +L
Sbjct: 368 PHDHPHADHVADAVLAHLRPDLHHLANHLMPWDHGILGSTQVVLDLVDVRVANAAVFNLQ 189
Query: 241 HHIFRAC 221
HHIFRAC
Sbjct: 188 HHIFRAC 168
Score = 105 bits (224), Expect(2) = 1e-037
Identities = 49/80 (61%), Positives = 54/80 (67%)
Frame = +1 / +2
Query: 421 VLPRVQPLQGQR*AVLQQEDLVIQRRLH*WTAHAGWIRLHHGRRPEVCGEDPXXXXXXXX 600
VLPR+ +QG+R AVLQQEDLV+QRRLH A AG +RL HGRR EV GEDP
Sbjct: 368 VLPRLPAVQGERRAVLQQEDLVVQRRLHRRQADAGRLRLRHGRRSEVRGEDPRRACAGAG 547
Query: 601 XXXXVRWRDGVQPAEALWAD 660
VR RDGVQP EAL AD
Sbjct: 548 GAAAVRGRDGVQPVEALEAD 607
Score = 72.5 bits (152), Expect(2) = 1e-037
Identities = 29/40 (72%), Positives = 33/40 (82%)
Frame = +1 / +2
Query: 214 QEHRP*RCGGEGALLRDLPHGHPPGQEPPRGFKVSYGPWA 333
QE+RP*RCG EG +LR LPHGHPPGQE P F+VS+GP A
Sbjct: 161 QENRP*RCGVEG*ILRHLPHGHPPGQERPGCFQVSHGPRA 280
Score = 63.8 bits (133), Expect(2) = 5e-038
Identities = 31/72 (43%), Positives = 35/72 (48%)
Frame = -3 / -3
Query: 635 CTPSRQRTXXXXXXXXXXXPGSSPQTSGRRPWWRRIHPAWAVHQXXXXXXXXXXXXXTAQ 456
CTPSR RT GSSP+TS RRPW RR PA A + TA+
Sbjct: 582 CTPSRPRTAAAPPAPAQARRGSSPRTSDRRPWRRRSRPASACRRCRRRCTTRSSCCSTAR 403
Query: 455 RWPCRGCTRGST 420
R PC +RGST
Sbjct: 402 RSPCTAGSRGST 367
Score = 58.8 bits (122), Expect(2) = 3e-014
Identities = 25/37 (67%), Positives = 26/37 (70%)
Frame = -3 / -3
Query: 332 AQGP*DTLKPRGGSWPGGCPCGRSRSRAPSPPHLQGL 222
A GP DT K G S PGGCPCG+ RS PS PHLQGL
Sbjct: 279 ALGPWDTWKHPGRS*PGGCPCGKCRSI*PSTPHLQGL 169
Score = 52.8 bits (109), Expect(2) = 1e-008
Identities = 22/48 (45%), Positives = 22/48 (45%)
Frame = +3 / +1
Query: 222 QALKMWW*XXXXXXXXXXXXXXXXXXXXLQSILWSLGTRWSARWWRSG 365
QALKMW * L SI WS G RW ARWWRSG
Sbjct: 169 QALKMWC*RLNTAAFATRTSTRSRTTWVLPSIPWSQGMRWLARWWRSG 312
Score = 43.7 bits (89), Expect(2) = 3e-014
Identities = 15/23 (65%), Positives = 20/23 (86%)
Frame = -1 / -1
Query: 574 DLHHKLLVDDHGGGESTLRGPSI 506
DL H+LL+DDHGGGE+ LR P++
Sbjct: 521 DLLHELLIDDHGGGEAALRRPAV 453
Score = 26.7 bits (52), Expect(2) = 1e-008
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = +3 / +1
Query: 474 RRSGHTTTSTLMDGPRR 524
RRSG TTTST G RR
Sbjct: 421 RRSGRTTTSTPTAGRRR 471
>gb|BQ763191.1|BQ763191 EBro02_SQ007_C15_R root, 3 week, hydroponic grown, low nitrogen, cv
Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone
EBro02_SQ007_C15 5', mRNA sequence
Length = 578
Score = 258 bits (557), Expect = 7e-068
Identities = 114/168 (67%), Positives = 118/168 (70%)
Frame = -2 / -3
Query: 642 SGLYTVTPAHSSGAACSGARPAGIFTTNFWSTTMVEANPPCVGRPSV*TSLYDQIFLLQY 463
SGLYTVTPAHSSGAACSGA PAGIFTTNF STTM EA PPCVG PSV*TSLYDQIFLLQY
Sbjct: 576 SGLYTVTPAHSSGAACSGASPAGIFTTNF*STTMAEAKPPCVGLPSV*TSLYDQIFLLQY 397
Query: 462 CSTLALQGLHSRQHXXXXXXXXXXXXPYLAXXXXXXXXXXXXXXXXTIGYFEAPRWFLAW 283
CST AL G SRQH YL T+GY EAPR FL W
Sbjct: 396 CSTFALHGRQSRQHPTITPTPTTSLTRYLLTSGPTSTTSPTTSCPGTMGYLEAPRSFLTW 217
Query: 282 WMSVWQIPQ*STFTTTSSGPVFLRV*E*GERCPVASLAAHPTTFLSDA 139
WMSVWQ+PQ TF TTSSGPVFLRV *GER PVASLAAHP T +S+A
Sbjct: 216 WMSVWQMPQYLTFNTTSSGPVFLRVYV*GERWPVASLAAHPVTVVSEA 73
Score = 184 bits (396), Expect(2) = 1e-079
Identities = 73/90 (81%), Positives = 75/90 (83%)
Frame = +2 / +2
Query: 374 AKYXXXXXXXXXXXXXCCRECSPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASTMVVD 553
+KY CCR+C PCKANVEQYCNKKIWSYNDVYTDGRPTQGGFAS MVVD
Sbjct: 308 SKYRVSDVVGVGVIVGCCRDCRPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASAMVVD 487
Query: 554 QKFVVKIPAGLAPEQAAPLLCAGVTVYSPL 643
QKFVVKIPAGLAPEQAAPLLCAGVTVYSPL
Sbjct: 488 QKFVVKIPAGLAPEQAAPLLCAGVTVYSPL 577
Score = 133 bits (286), Expect(2) = 1e-079
Identities = 52/61 (85%), Positives = 54/61 (88%)
Frame = +2 / +2
Query: 140 ASERKVVGWAARDATGHLSPYSYTLRNTGPEDVVVKVLYCGICHTDIHQAKNHLGASKYP 319
ASE V GWAARDATGHLSPY+YTLR TGPEDVV+KV YCGICHTDIHQ KN LGASKYP
Sbjct: 74 ASETTVTGWAARDATGHLSPYTYTLRKTGPEDVVLKVKYCGICHTDIHQVKNDLGASKYP 253
Query: 320 M 322
M
Sbjct: 254 M 256
Score = 115 bits (245), Expect(2) = 5e-038
Identities = 48/67 (71%), Positives = 54/67 (80%)
Frame = -1 / -2
Query: 421 PNDHPDAYHVADAVLGHFGPDLHHLADHLVPRDHRIL*SPEVVLGLVDVRVADPAVEHLH 242
P+DHP A HVADAVL H PDLHHLA+HL+P DH IL S +VVL LVDVRVA+ AV +L
Sbjct: 355 PHDHPHADHVADAVLAHLRPDLHHLANHLMPWDHGILGSTQVVLDLVDVRVANAAVFNLQ 176
Query: 241 HHIFRAC 221
HHIFRAC
Sbjct: 175 HHIFRAC 155
Score = 98.2 bits (208), Expect(2) = 1e-035
Identities = 45/74 (60%), Positives = 50/74 (67%)
Frame = +1 / +1
Query: 421 VLPRVQPLQGQR*AVLQQEDLVIQRRLH*WTAHAGWIRLHHGRRPEVCGEDPXXXXXXXX 600
VLPR+ +QG+R AVLQQEDLV+QRRLH A AG +RL HGRR EV GEDP
Sbjct: 355 VLPRLPAVQGERRAVLQQEDLVVQRRLHRRQADAGRLRLRHGRRSEVRGEDPRRACAGAG 534
Query: 601 XXXXVRWRDGVQPA 642
VR RDGVQPA
Sbjct: 535 GAAAVRGRDGVQPA 576
Score = 72.5 bits (152), Expect(2) = 1e-035
Identities = 29/40 (72%), Positives = 33/40 (82%)
Frame = +1 / +1
Query: 214 QEHRP*RCGGEGALLRDLPHGHPPGQEPPRGFKVSYGPWA 333
QE+RP*RCG EG +LR LPHGHPPGQE P F+VS+GP A
Sbjct: 148 QENRP*RCGVEG*ILRHLPHGHPPGQERPGCFQVSHGPRA 267
Score = 63.8 bits (133), Expect(2) = 5e-038
Identities = 31/72 (43%), Positives = 35/72 (48%)
Frame = -3 / -1
Query: 635 CTPSRQRTXXXXXXXXXXXPGSSPQTSGRRPWWRRIHPAWAVHQXXXXXXXXXXXXXTAQ 456
CTPSR RT GSSP+TS RRPW RR PA A + TA+
Sbjct: 569 CTPSRPRTAAAPPAPAQARRGSSPRTSDRRPWRRRSRPASACRRCRRRCTTRSSCCSTAR 390
Query: 455 RWPCRGCTRGST 420
R PC +RGST
Sbjct: 389 RSPCTAGSRGST 354
Score = 58.8 bits (122), Expect(2) = 7e-016
Identities = 25/37 (67%), Positives = 26/37 (70%)
Frame = -3 / -1
Query: 332 AQGP*DTLKPRGGSWPGGCPCGRSRSRAPSPPHLQGL 222
A GP DT K G S PGGCPCG+ RS PS PHLQGL
Sbjct: 266 ALGPWDTWKHPGRS*PGGCPCGKCRSI*PSTPHLQGL 156
Score = 52.8 bits (109), Expect(2) = 1e-008
Identities = 22/48 (45%), Positives = 22/48 (45%)
Frame = +3 / +3
Query: 222 QALKMWW*XXXXXXXXXXXXXXXXXXXXLQSILWSLGTRWSARWWRSG 365
QALKMW * L SI WS G RW ARWWRSG
Sbjct: 156 QALKMWC*RLNTAAFATRTSTRSRTTWVLPSIPWSQGMRWLARWWRSG 299
Score = 48.7 bits (100), Expect(2) = 7e-016
Identities = 16/23 (69%), Positives = 21/23 (91%)
Frame = -1 / -2
Query: 574 DLHHKLLVDDHGGGESTLRGPSI 506
DLHH+LL+DDHGGGE+ LR P++
Sbjct: 508 DLHHELLIDDHGGGEAALRRPAV 440
Score = 26.7 bits (52), Expect(2) = 1e-008
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = +3 / +3
Query: 474 RRSGHTTTSTLMDGPRR 524
RRSG TTTST G RR
Sbjct: 408 RRSGRTTTSTPTAGRRR 458
>gb|BE214468.1|BE214468 HV_CEb0003I17f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0003I17f, mRNA sequence
Length = 723
Score = 234 bits (505), Expect(2) = 5e-063
Identities = 104/161 (64%), Positives = 108/161 (67%)
Frame = -2 / -1
Query: 621 PAHSSGAACSGARPAGIFTTNFWSTTMVEANPPCVGRPSV*TSLYDQIFLLQYCSTLALQ 442
PAHS GAACSGA PAGIFT NF ST M EA PPCVG PSV*TSLYDQIFLLQYCST AL
Sbjct: 558 PAHSRGAACSGASPAGIFTPNF*STAMAEAKPPCVGLPSV*TSLYDQIFLLQYCSTFALH 379
Query: 441 GLHSRQHXXXXXXXXXXXXPYLAXXXXXXXXXXXXXXXXTIGYFEAPRWFLAWWMSVWQI 262
G SRQH YL T+GY EAPR FL WWMSVWQ+
Sbjct: 378 GRQSRQHPTITPTPTTSPTRYLLTSGPTSTTSPTTSCPGTMGYLEAPRSFLTWWMSVWQM 199
Query: 261 PQ*STFTTTSSGPVFLRV*E*GERCPVASLAAHPTTFLSDA 139
PQ TF TTSSGPVFLRV *GER PVASLAAHP T +S+A
Sbjct: 198 PQYLTFNTTSSGPVFLRVYV*GERWPVASLAAHPVTVVSEA 76
Score = 163 bits (350), Expect(3) = 1e-075
Identities = 64/82 (78%), Positives = 67/82 (81%)
Frame = +2 / +2
Query: 422 CCRECSPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASTMVVDQKFVVKIPAGLAPEQA 601
CCR+C PCKANVEQYCNKKIWSYNDVYTDGRPTQGGFAS M VDQKF VKIPAGLAPEQA
Sbjct: 359 CCRDCRPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASAMAVDQKFGVKIPAGLAPEQA 538
Query: 602 APLLCAGVTVYSPLKHFGLTNP 667
APLLCAG P + +P
Sbjct: 539 APLLCAGRDGVQPAEALRAEDP 604
Score = 133 bits (286), Expect(3) = 1e-075
Identities = 52/61 (85%), Positives = 54/61 (88%)
Frame = +2 / +2
Query: 140 ASERKVVGWAARDATGHLSPYSYTLRNTGPEDVVVKVLYCGICHTDIHQAKNHLGASKYP 319
ASE V GWAARDATGHLSPY+YTLR TGPEDVV+KV YCGICHTDIHQ KN LGASKYP
Sbjct: 77 ASETTVTGWAARDATGHLSPYTYTLRKTGPEDVVLKVKYCGICHTDIHQVKNDLGASKYP 256
Query: 320 M 322
M
Sbjct: 257 M 259
Score = 115 bits (245), Expect(4) = 1e-039
Identities = 48/67 (71%), Positives = 54/67 (80%)
Frame = -1 / -3
Query: 421 PNDHPDAYHVADAVLGHFGPDLHHLADHLVPRDHRIL*SPEVVLGLVDVRVADPAVEHLH 242
P+DHP A HVADAVL H PDLHHLA+HL+P DH IL S +VVL LVDVRVA+ AV +L
Sbjct: 358 PHDHPHADHVADAVLAHLRPDLHHLANHLMPWDHGILGSTQVVLDLVDVRVANAAVFNLQ 179
Query: 241 HHIFRAC 221
HHIFRAC
Sbjct: 178 HHIFRAC 158
Score = 78.0 bits (164), Expect(3) = 3e-032
Identities = 37/66 (56%), Positives = 42/66 (63%)
Frame = +1 / +1
Query: 421 VLPRVQPLQGQR*AVLQQEDLVIQRRLH*WTAHAGWIRLHHGRRPEVCGEDPXXXXXXXX 600
VLPR+ +QG+R AVLQQEDLV+QRRLH A A +RL HGRR EV GEDP
Sbjct: 358 VLPRLPAVQGERRAVLQQEDLVVQRRLHRRQADARRLRLRHGRRSEVRGEDPRRACAGAS 537
Query: 601 XXXXVR 618
VR
Sbjct: 538 GAPAVR 555
Score = 72.5 bits (152), Expect(3) = 3e-032
Identities = 29/40 (72%), Positives = 33/40 (82%)
Frame = +1 / +1
Query: 214 QEHRP*RCGGEGALLRDLPHGHPPGQEPPRGFKVSYGPWA 333
QE+RP*RCG EG +LR LPHGHPPGQE P F+VS+GP A
Sbjct: 151 QENRP*RCGVEG*ILRHLPHGHPPGQERPGCFQVSHGPRA 270
Score = 58.8 bits (122), Expect(2) = 6e-016
Identities = 25/37 (67%), Positives = 26/37 (70%)
Frame = -3 / -2
Query: 332 AQGP*DTLKPRGGSWPGGCPCGRSRSRAPSPPHLQGL 222
A GP DT K G S PGGCPCG+ RS PS PHLQGL
Sbjct: 269 ALGPWDTWKHPGRS*PGGCPCGKCRSI*PSTPHLQGL 159
Score = 52.8 bits (109), Expect(3) = 1e-015
Identities = 22/48 (45%), Positives = 22/48 (45%)
Frame = +3 / +3
Query: 222 QALKMWW*XXXXXXXXXXXXXXXXXXXXLQSILWSLGTRWSARWWRSG 365
QALKMW * L SI WS G RW ARWWRSG
Sbjct: 159 QALKMWC*RLNTAAFATRTSTRSRTTWVLPSIPWSQGMRWLARWWRSG 302
Score = 46.0 bits (94), Expect(2) = 6e-016
Identities = 25/66 (37%), Positives = 29/66 (43%)
Frame = -3 / -2
Query: 617 RTXXXXXXXXXXXPGSSPQTSGRRPWWRRIHPAWAVHQXXXXXXXXXXXXXTAQRWPCRG 438
RT GSSP+TS RRPW RR A A + TA+R PC
Sbjct: 554 RTAGAPLAPAQARRGSSPRTSDRRPWRRRSRLASACRRCRRRCTTRSSCCSTARRSPCTA 375
Query: 437 CTRGST 420
+RGST
Sbjct: 374 GSRGST 357
Score = 42.3 bits (86), Expect(3) = 1e-015
Identities = 17/31 (54%), Positives = 18/31 (58%)
Frame = +2 / +3
Query: 575 PAGLAPEQAAPLLCAGVTVYSPLKHFGLTNP 667
P GL + P VTVYSPLKHFGL P
Sbjct: 513 PPGLRRSKRRPCCARAVTVYSPLKHFGLKTP 605
Score = 40.9 bits (83), Expect(4) = 1e-039
Identities = 14/23 (60%), Positives = 19/23 (82%)
Frame = -1 / -3
Query: 574 DLHHKLLVDDHGGGESTLRGPSI 506
DLH +LL+D HGGGE+ LR P++
Sbjct: 511 DLHPELLIDGHGGGEAALRRPAV 443
Score = 39.1 bits (79), Expect(4) = 1e-039
Identities = 16/31 (51%), Positives = 17/31 (54%)
Frame = -2 / -3
Query: 666 GFVSPKCFSGLYTVTPAHSSGAACSGARPAG 574
G SPKCFSGLYTVT G +P G
Sbjct: 604 GVFSPKCFSGLYTVTARAQQGRRLLRRKPGG 512
Score = 28.6 bits (56), Expect(2) = 5e-063
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -2 / -3
Query: 774 FLDDELITVTWWPMALATF 718
F ++LI V+ WPM LATF
Sbjct: 712 FFLEKLIPVSGWPMELATF 656
Score = 27.2 bits (53), Expect(3) = 3e-032
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = +1 / +2
Query: 622 RDGVQPAEALWAD 660
RDGVQPAEAL A+
Sbjct: 560 RDGVQPAEALRAE 598
Score = 26.7 bits (52), Expect(3) = 1e-075
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +1 / +2
Query: 727 QGHGPPRDGDQLVVQEA 777
Q HGP DGDQL +E+
Sbjct: 665 QFHGPTTDGDQLFQKES 715
Score = 25.4 bits (49), Expect(3) = 1e-015
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +3 / +3
Query: 474 RRSGHTTTSTLMDGPRR 524
RRSG TTTST G R+
Sbjct: 411 RRSGRTTTSTPTAGRRK 461
Score = 25.4 bits (49), Expect(4) = 1e-039
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -3 / -1
Query: 773 SWTTS*SPSRGGPWPW 726
S+ S*SPS GPW W
Sbjct: 711 SFWKS*SPSVVGPWNW 664
>gb|AL507638.1|AL507638 AL507638 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY06G20V 5',
mRNA sequence
Length = 699
Score = 234 bits (506), Expect = 8e-061
Identities = 105/161 (65%), Positives = 109/161 (67%)
Frame = -2 / -2
Query: 621 PAHSSGAACSGARPAGIFTTNFWSTTMVEANPPCVGRPSV*TSLYDQIFLLQYCSTLALQ 442
P SSGAACSGA PAGIFTTNF STTM EA PPCVG PSV*TSLYDQIFLLQYCST AL
Sbjct: 563 PRTSSGAACSGASPAGIFTTNF*STTMAEAKPPCVGLPSV*TSLYDQIFLLQYCSTFALH 384
Query: 441 GLHSRQHXXXXXXXXXXXXPYLAXXXXXXXXXXXXXXXXTIGYFEAPRWFLAWWMSVWQI 262
G SRQH YL T+GY EAPR FL WWMSVWQ+
Sbjct: 383 GRQSRQHPTITPTPTTSPTRYLLTSGPTSTTSPTTSCPGTMGYLEAPRSFLTWWMSVWQM 204
Query: 261 PQ*STFTTTSSGPVFLRV*E*GERCPVASLAAHPTTFLSDA 139
PQ TF TTSSGPVFLRV *GER PVASLAAHP T +S+A
Sbjct: 203 PQYLTFNTTSSGPVFLRVYV*GERWPVASLAAHPVTVVSEA 81
Score = 160 bits (345), Expect(3) = 7e-074
Identities = 62/67 (92%), Positives = 63/67 (94%)
Frame = +2 / +1
Query: 422 CCRECSPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASTMVVDQKFVVKIPAGLAPEQA 601
CCR+C PCKANVEQYCNKKIWSYNDVYTDGRPTQGGFAS MVVDQKFVVKIPAGLAPEQA
Sbjct: 364 CCRDCRPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASAMVVDQKFVVKIPAGLAPEQA 543
Query: 602 APLLCAG 622
APLL G
Sbjct: 544 APLLVRG 564
Score = 133 bits (286), Expect(3) = 7e-074
Identities = 52/61 (85%), Positives = 54/61 (88%)
Frame = +2 / +1
Query: 140 ASERKVVGWAARDATGHLSPYSYTLRNTGPEDVVVKVLYCGICHTDIHQAKNHLGASKYP 319
ASE V GWAARDATGHLSPY+YTLR TGPEDVV+KV YCGICHTDIHQ KN LGASKYP
Sbjct: 82 ASETTVTGWAARDATGHLSPYTYTLRKTGPEDVVLKVKYCGICHTDIHQVKNDLGASKYP 261
Query: 320 M 322
M
Sbjct: 262 M 264
Score = 115 bits (245), Expect(3) = 2e-037
Identities = 48/67 (71%), Positives = 54/67 (80%)
Frame = -1 / -1
Query: 421 PNDHPDAYHVADAVLGHFGPDLHHLADHLVPRDHRIL*SPEVVLGLVDVRVADPAVEHLH 242
P+DHP A HVADAVL H PDLHHLA+HL+P DH IL S +VVL LVDVRVA+ AV +L
Sbjct: 363 PHDHPHADHVADAVLAHLRPDLHHLANHLMPWDHGILGSTQVVLDLVDVRVANAAVFNLQ 184
Query: 241 HHIFRAC 221
HHIFRAC
Sbjct: 183 HHIFRAC 163
Score = 81.3 bits (171), Expect(3) = 1e-035
Identities = 36/52 (69%), Positives = 41/52 (78%)
Frame = +1 / +3
Query: 421 VLPRVQPLQGQR*AVLQQEDLVIQRRLH*WTAHAGWIRLHHGRRPEVCGEDP 576
VLPR+ +QG+R AVLQQEDLV+QRRLH A AG +RL HGRR EV GEDP
Sbjct: 363 VLPRLPAVQGERRAVLQQEDLVVQRRLHRRQADAGRLRLRHGRRSEVRGEDP 518
Score = 72.5 bits (152), Expect(3) = 1e-035
Identities = 29/40 (72%), Positives = 33/40 (82%)
Frame = +1 / +3
Query: 214 QEHRP*RCGGEGALLRDLPHGHPPGQEPPRGFKVSYGPWA 333
QE+RP*RCG EG +LR LPHGHPPGQE P F+VS+GP A
Sbjct: 156 QENRP*RCGVEG*ILRHLPHGHPPGQERPGCFQVSHGPRA 275
Score = 58.8 bits (122), Expect(2) = 8e-016
Identities = 25/37 (67%), Positives = 26/37 (70%)
Frame = -3 / -3
Query: 332 AQGP*DTLKPRGGSWPGGCPCGRSRSRAPSPPHLQGL 222
A GP DT K G S PGGCPCG+ RS PS PHLQGL
Sbjct: 274 ALGPWDTWKHPGRS*PGGCPCGKCRSI*PSTPHLQGL 164
Score = 52.8 bits (109), Expect(2) = 1e-008
Identities = 22/48 (45%), Positives = 22/48 (45%)
Frame = +3 / +2
Query: 222 QALKMWW*XXXXXXXXXXXXXXXXXXXXLQSILWSLGTRWSARWWRSG 365
QALKMW * L SI WS G RW ARWWRSG
Sbjct: 164 QALKMWC*RLNTAAFATRTSTRSRTTWVLPSIPWSQGMRWLARWWRSG 307
Score = 50.1 bits (103), Expect(3) = 2e-037
Identities = 24/52 (46%), Positives = 28/52 (53%)
Frame = -3 / -3
Query: 575 GSSPQTSGRRPWWRRIHPAWAVHQXXXXXXXXXXXXXTAQRWPCRGCTRGST 420
GSSP+TS RRPW RR PA A + TA+R PC +RGST
Sbjct: 517 GSSPRTSDRRPWRRRSRPASACRRCRRRCTTRSSCCSTARRSPCTAGSRGST 362
Score = 48.7 bits (100), Expect(2) = 8e-016
Identities = 16/23 (69%), Positives = 21/23 (91%)
Frame = -1 / -1
Query: 574 DLHHKLLVDDHGGGESTLRGPSI 506
DLHH+LL+DDHGGGE+ LR P++
Sbjct: 516 DLHHELLIDDHGGGEAALRRPAV 448
Score = 35.0 bits (70), Expect(3) = 1e-035
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = +2 / +2
Query: 575 PAGLAPEQAAPLLCAGVTVYSPLKHFGLTNP 667
P GL + LCAGVTVYSPL+ +P
Sbjct: 518 PPGLRRSRRRRCLCAGVTVYSPLEALRADDP 610
Score = 29.9 bits (59), Expect(3) = 2e-037
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = -2 / -1
Query: 642 SGLYTVTPAHSSGAACSGARPAG 574
SGLYTVTPAH +P G
Sbjct: 585 SGLYTVTPAHKQRRRLLRRKPGG 517
Score = 26.7 bits (52), Expect(2) = 1e-008
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = +3 / +2
Query: 474 RRSGHTTTSTLMDGPRR 524
RRSG TTTST G RR
Sbjct: 416 RRSGRTTTSTPTAGRRR 466
Score = 23.1 bits (44), Expect(3) = 7e-074
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +1 / +1
Query: 613 VRWRDGVQPA 642
VR RDGVQPA
Sbjct: 556 VRGRDGVQPA 585
>gb|BQ469466.1|BQ469466 HM04O09r HM Hordeum vulgare subsp. vulgare cDNA clone HM04O09
5-PRIME, mRNA sequence
Length = 554
Score = 236 bits (510), Expect = 2e-061
Identities = 105/159 (66%), Positives = 109/159 (68%)
Frame = -2 / -2
Query: 615 HSSGAACSGARPAGIFTTNFWSTTMVEANPPCVGRPSV*TSLYDQIFLLQYCSTLALQGL 436
HSSGAACSGA PAGIFTTNF STTM EA PPCVG PSV*TSLYDQIFLLQYCST AL G
Sbjct: 553 HSSGAACSGASPAGIFTTNF*STTMAEAKPPCVGLPSV*TSLYDQIFLLQYCSTFALHGR 374
Query: 435 HSRQHXXXXXXXXXXXXPYLAXXXXXXXXXXXXXXXXTIGYFEAPRWFLAWWMSVWQIPQ 256
SRQH YL T+GY EAPR FL WWMSVWQ+PQ
Sbjct: 373 QSRQHPTITPTPTTSPTRYLLTSGPTSTTSPTTSCPGTMGYLEAPRSFLTWWMSVWQMPQ 194
Query: 255 *STFTTTSSGPVFLRV*E*GERCPVASLAAHPTTFLSDA 139
TF TTSSGPVFLRV *GER PVASLAAHP T +S+A
Sbjct: 193 YLTFNTTSSGPVFLRVYV*GERWPVASLAAHPVTVVSEA 77
Score = 163 bits (350), Expect(2) = 2e-073
Identities = 62/65 (95%), Positives = 63/65 (96%)
Frame = +2 / +3
Query: 422 CCRECSPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASTMVVDQKFVVKIPAGLAPEQA 601
CCR+C PCKANVEQYCNKKIWSYNDVYTDGRPTQGGFAS MVVDQKFVVKIPAGLAPEQA
Sbjct: 360 CCRDCRPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASAMVVDQKFVVKIPAGLAPEQA 539
Query: 602 APLLC 616
APLLC
Sbjct: 540 APLLC 554
Score = 133 bits (286), Expect(2) = 2e-073
Identities = 52/61 (85%), Positives = 54/61 (88%)
Frame = +2 / +3
Query: 140 ASERKVVGWAARDATGHLSPYSYTLRNTGPEDVVVKVLYCGICHTDIHQAKNHLGASKYP 319
ASE V GWAARDATGHLSPY+YTLR TGPEDVV+KV YCGICHTDIHQ KN LGASKYP
Sbjct: 78 ASETTVTGWAARDATGHLSPYTYTLRKTGPEDVVLKVKYCGICHTDIHQVKNDLGASKYP 257
Query: 320 M 322
M
Sbjct: 258 M 260
Score = 115 bits (245), Expect(2) = 6e-034
Identities = 48/67 (71%), Positives = 54/67 (80%)
Frame = -1 / -1
Query: 421 PNDHPDAYHVADAVLGHFGPDLHHLADHLVPRDHRIL*SPEVVLGLVDVRVADPAVEHLH 242
P+DHP A HVADAVL H PDLHHLA+HL+P DH IL S +VVL LVDVRVA+ AV +L
Sbjct: 359 PHDHPHADHVADAVLAHLRPDLHHLANHLMPWDHGILGSTQVVLDLVDVRVANAAVFNLQ 180
Query: 241 HHIFRAC 221
HHIFRAC
Sbjct: 179 HHIFRAC 159
Score = 81.3 bits (171), Expect(2) = 2e-030
Identities = 36/52 (69%), Positives = 41/52 (78%)
Frame = +1 / +2
Query: 421 VLPRVQPLQGQR*AVLQQEDLVIQRRLH*WTAHAGWIRLHHGRRPEVCGEDP 576
VLPR+ +QG+R AVLQQEDLV+QRRLH A AG +RL HGRR EV GEDP
Sbjct: 359 VLPRLPAVQGERRAVLQQEDLVVQRRLHRRQADAGRLRLRHGRRSEVRGEDP 514
Score = 72.5 bits (152), Expect(2) = 2e-030
Identities = 29/40 (72%), Positives = 33/40 (82%)
Frame = +1 / +2
Query: 214 QEHRP*RCGGEGALLRDLPHGHPPGQEPPRGFKVSYGPWA 333
QE+RP*RCG EG +LR LPHGHPPGQE P F+VS+GP A
Sbjct: 152 QENRP*RCGVEG*ILRHLPHGHPPGQERPGCFQVSHGPRA 271
Score = 58.8 bits (122), Expect(2) = 6e-016
Identities = 25/37 (67%), Positives = 26/37 (70%)
Frame = -3 / -3
Query: 332 AQGP*DTLKPRGGSWPGGCPCGRSRSRAPSPPHLQGL 222
A GP DT K G S PGGCPCG+ RS PS PHLQGL
Sbjct: 270 ALGPWDTWKHPGRS*PGGCPCGKCRSI*PSTPHLQGL 160
Score = 52.8 bits (109), Expect(2) = 1e-008
Identities = 22/48 (45%), Positives = 22/48 (45%)
Frame = +3 / +1
Query: 222 QALKMWW*XXXXXXXXXXXXXXXXXXXXLQSILWSLGTRWSARWWRSG 365
QALKMW * L SI WS G RW ARWWRSG
Sbjct: 160 QALKMWC*RLNTAAFATRTSTRSRTTWVLPSIPWSQGMRWLARWWRSG 303
Score = 50.1 bits (103), Expect(2) = 6e-034
Identities = 24/52 (46%), Positives = 28/52 (53%)
Frame = -3 / -3
Query: 575 GSSPQTSGRRPWWRRIHPAWAVHQXXXXXXXXXXXXXTAQRWPCRGCTRGST 420
GSSP+TS RRPW RR PA A + TA+R PC +RGST
Sbjct: 513 GSSPRTSDRRPWRRRSRPASACRRCRRRCTTRSSCCSTARRSPCTAGSRGST 358
Score = 48.7 bits (100), Expect(2) = 6e-016
Identities = 16/23 (69%), Positives = 21/23 (91%)
Frame = -1 / -1
Query: 574 DLHHKLLVDDHGGGESTLRGPSI 506
DLHH+LL+DDHGGGE+ LR P++
Sbjct: 512 DLHHELLIDDHGGGEAALRRPAV 444
Score = 26.7 bits (52), Expect(2) = 1e-008
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = +3 / +1
Query: 474 RRSGHTTTSTLMDGPRR 524
RRSG TTTST G RR
Sbjct: 412 RRSGRTTTSTPTAGRRR 462
>gb|BE455755.3|BE455755 HVSMEg0019K10f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0019K10f, mRNA sequence
Length = 837
Score = 238 bits (514), Expect(2) = 5e-063
Identities = 107/176 (60%), Positives = 113/176 (64%)
Frame = -2 / -2
Query: 666 GFVSPKCFSGLYTVTPAHSSGAACSGARPAGIFTTNFWSTTMVEANPPCVGRPSV*TSLY 487
G + C GLY PAHSSGAACSG GIFTTNF STTM EA PPCVG PSV*TSLY
Sbjct: 602 GSSAKSCSRGLYPSRPAHSSGAACSGESRRGIFTTNF*STTMAEAKPPCVGLPSV*TSLY 423
Query: 486 DQIFLLQYCSTLALQGLHSRQHXXXXXXXXXXXXPYLAXXXXXXXXXXXXXXXXTIGYFE 307
DQIFLLQYCST AL G SRQH YL T+GY E
Sbjct: 422 DQIFLLQYCSTFALHGRQSRQHPTITPTPTTSPTRYLLTSGPTSTTSPTTSCLGTMGYLE 243
Query: 306 APRWFLAWWMSVWQIPQ*STFTTTSSGPVFLRV*E*GERCPVASLAAHPTTFLSDA 139
APR FL WWMSVWQ+PQ TF TT SGPVFLRV *G+R PVASLAAHP T +S+A
Sbjct: 242 APRSFLTWWMSVWQMPQYLTFNTTFSGPVFLRVYV*GKRWPVASLAAHPVTVVSEA 75
Score = 166 bits (358), Expect(2) = 6e-073
Identities = 65/82 (79%), Positives = 69/82 (84%)
Frame = +2 / +1
Query: 422 CCRECSPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASTMVVDQKFVVKIPAGLAPEQA 601
CCR+C PCKANVEQYCNKKIWSYNDVYTDGRPTQGGFAS MVVDQKFVVKIP L+PEQA
Sbjct: 358 CCRDCRPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASAMVVDQKFVVKIPRRLSPEQA 537
Query: 602 APLLCAGVTVYSPLKHFGLTNP 667
APLLCAG Y+PL+ P
Sbjct: 538 APLLCAGRDGYNPLEQLLADEP 603
Score = 128 bits (275), Expect(2) = 6e-073
Identities = 50/61 (81%), Positives = 53/61 (86%)
Frame = +2 / +1
Query: 140 ASERKVVGWAARDATGHLSPYSYTLRNTGPEDVVVKVLYCGICHTDIHQAKNHLGASKYP 319
ASE V GWAARDATGHL PY+YTLR TGPE+VV+KV YCGICHTDIHQ KN LGASKYP
Sbjct: 76 ASETTVTGWAARDATGHLFPYTYTLRKTGPENVVLKVKYCGICHTDIHQVKNDLGASKYP 255
Query: 320 M 322
M
Sbjct: 256 M 258
Score = 115 bits (245), Expect(2) = 3e-035
Identities = 48/67 (71%), Positives = 54/67 (80%)
Frame = -1 / -1
Query: 421 PNDHPDAYHVADAVLGHFGPDLHHLADHLVPRDHRIL*SPEVVLGLVDVRVADPAVEHLH 242
P+DHP A HVADAVL H PDLHHLA+HL+P DH IL S +VVL LVDVRVA+ AV +L
Sbjct: 357 PHDHPHADHVADAVLAHLRPDLHHLANHLMPWDHGILGSTQVVLDLVDVRVANAAVFNLQ 178
Query: 241 HHIFRAC 221
HHIFRAC
Sbjct: 177 HHIFRAC 157
Score = 84.9 bits (179), Expect(2) = 3e-031
Identities = 41/73 (56%), Positives = 46/73 (63%)
Frame = +1 / +3
Query: 421 VLPRVQPLQGQR*AVLQQEDLVIQRRLH*WTAHAGWIRLHHGRRPEVCGEDPXXXXXXXX 600
VLPR+ +QG+R AVLQQEDLV+QRRLH A AG +RL HGRR EV GEDP
Sbjct: 357 VLPRLPAVQGERRAVLQQEDLVVQRRLHRRQADAGRLRLRHGRRSEVRGEDPPPAFAGAS 536
Query: 601 XXXXVRWRDGVQP 639
VR VQP
Sbjct: 537 GAAAVRGP*RVQP 575
Score = 71.2 bits (149), Expect(2) = 3e-031
Identities = 28/40 (70%), Positives = 33/40 (82%)
Frame = +1 / +3
Query: 214 QEHRP*RCGGEGALLRDLPHGHPPGQEPPRGFKVSYGPWA 333
QE+RP*+CG EG +LR LPHGHPPGQE P F+VS+GP A
Sbjct: 150 QENRP*KCGVEG*ILRHLPHGHPPGQERPGCFQVSHGPKA 269
Score = 57.0 bits (118), Expect(3) = 1e-016
Identities = 24/37 (64%), Positives = 25/37 (67%)
Frame = -3 / -3
Query: 332 AQGP*DTLKPRGGSWPGGCPCGRSRSRAPSPPHLQGL 222
A GP DT K G S PGGCPCG+ RS PS PH QGL
Sbjct: 268 ALGPWDTWKHPGRS*PGGCPCGKCRSI*PSTPHFQGL 158
Score = 54.7 bits (113), Expect(2) = 3e-035
Identities = 28/72 (38%), Positives = 32/72 (44%)
Frame = -3 / -3
Query: 635 CTPSRQRTXXXXXXXXXXXPGSSPQTSGRRPWWRRIHPAWAVHQXXXXXXXXXXXXXTAQ 456
CT RT GSSP+TS RRPW RR PA A + TA+
Sbjct: 571 CTRHGPRTAAAPLAPAKAGGGSSPRTSDRRPWRRRSRPASACRRCRRRCTTRSSCCSTAR 392
Query: 455 RWPCRGCTRGST 420
R PC +RGST
Sbjct: 391 RSPCTAGSRGST 356
Score = 52.8 bits (109), Expect(2) = 1e-008
Identities = 22/48 (45%), Positives = 22/48 (45%)
Frame = +3 / +2
Query: 222 QALKMWW*XXXXXXXXXXXXXXXXXXXXLQSILWSLGTRWSARWWRSG 365
QALKMW * L SI WS G RW ARWWRSG
Sbjct: 158 QALKMWC*RLNTAAFATRTSTRSRTTWVLPSIPWSQGMRWLARWWRSG 301
Score = 48.7 bits (100), Expect(3) = 1e-016
Identities = 16/23 (69%), Positives = 21/23 (91%)
Frame = -1 / -1
Query: 574 DLHHKLLVDDHGGGESTLRGPSI 506
DLHH+LL+DDHGGGE+ LR P++
Sbjct: 510 DLHHELLIDDHGGGEAALRRPAV 442
Score = 26.7 bits (52), Expect(2) = 1e-008
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = +3 / +2
Query: 474 RRSGHTTTSTLMDGPRR 524
RRSG TTTST G RR
Sbjct: 410 RRSGRTTTSTPTAGRRR 460
Score = 24.4 bits (47), Expect(3) = 1e-016
Identities = 11/31 (35%), Positives = 14/31 (45%)
Frame = -2 / -1
Query: 666 GFVSPKCFSGLYTVTPAHSSGAACSGARPAG 574
GF+S K F G+ VT +PAG
Sbjct: 603 GFISQKLFKGVVPVTARAQQRRRLLRRKPAG 511
Score = 24.4 bits (47), Expect(2) = 5e-063
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = -2 / -3
Query: 822 LTRYASAPRWSIASARFLDDELITVTWWPMALATF 718
LTR+ A S A L +LI W LATF
Sbjct: 760 LTRFLLAASLSTALGPLLFGQLIPRHVWAQGLATF 656
>gb|BF260353.3|BF260353 HVSMEf0021M09f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0021M09f, mRNA sequence
Length = 539
Score = 232 bits (501), Expect = 4e-060
Identities = 104/159 (65%), Positives = 108/159 (67%)
Frame = -2 / -1
Query: 615 HSSGAACSGARPAGIFTTNFWSTTMVEANPPCVGRPSV*TSLYDQIFLLQYCSTLALQGL 436
HSSGAACSGA PAGIFTTNF STTM EA PPCVG PSV*TSLYDQIFLLQYCST AL G
Sbjct: 536 HSSGAACSGASPAGIFTTNF*STTMAEAKPPCVGLPSV*TSLYDQIFLLQYCSTFALHGR 357
Query: 435 HSRQHXXXXXXXXXXXXPYLAXXXXXXXXXXXXXXXXTIGYFEAPRWFLAWWMSVWQIPQ 256
SRQH YL T+GY EA R FL WWMSVWQ+PQ
Sbjct: 356 QSRQHPTITPTPTTSPTRYLLTSGPTSTTSPTTSCPGTMGYLEAXRSFLTWWMSVWQMPQ 177
Query: 255 *STFTTTSSGPVFLRV*E*GERCPVASLAAHPTTFLSDA 139
TF TTSSGPVFLRV *GER PVASLAAHP T +S+A
Sbjct: 176 YLTFNTTSSGPVFLRVYV*GERWPVASLAAHPVTVVSEA 60
Score = 163 bits (350), Expect(2) = 2e-072
Identities = 62/65 (95%), Positives = 63/65 (96%)
Frame = +2 / +1
Query: 422 CCRECSPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASTMVVDQKFVVKIPAGLAPEQA 601
CCR+C PCKANVEQYCNKKIWSYNDVYTDGRPTQGGFAS MVVDQKFVVKIPAGLAPEQA
Sbjct: 343 CCRDCRPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASAMVVDQKFVVKIPAGLAPEQA 522
Query: 602 APLLC 616
APLLC
Sbjct: 523 APLLC 537
Score = 130 bits (279), Expect(2) = 2e-072
Identities = 51/61 (83%), Positives = 53/61 (86%)
Frame = +2 / +1
Query: 140 ASERKVVGWAARDATGHLSPYSYTLRNTGPEDVVVKVLYCGICHTDIHQAKNHLGASKYP 319
ASE V GWAARDATGHLSPY+YTLR TGPEDVV+KV YCGICHTDIHQ KN L ASKYP
Sbjct: 61 ASETTVTGWAARDATGHLSPYTYTLRKTGPEDVVLKVKYCGICHTDIHQVKNDLXASKYP 240
Query: 320 M 322
M
Sbjct: 241 M 243
Score = 115 bits (245), Expect(2) = 5e-034
Identities = 48/67 (71%), Positives = 54/67 (80%)
Frame = -1 / -3
Query: 421 PNDHPDAYHVADAVLGHFGPDLHHLADHLVPRDHRIL*SPEVVLGLVDVRVADPAVEHLH 242
P+DHP A HVADAVL H PDLHHLA+HL+P DH IL S +VVL LVDVRVA+ AV +L
Sbjct: 342 PHDHPHADHVADAVLAHLRPDLHHLANHLMPWDHGILGSTQVVLDLVDVRVANAAVFNLQ 163
Query: 241 HHIFRAC 221
HHIFRAC
Sbjct: 162 HHIFRAC 142
Score = 82.2 bits (173), Expect(2) = 6e-031
Identities = 38/66 (57%), Positives = 43/66 (65%)
Frame = +1 / +3
Query: 421 VLPRVQPLQGQR*AVLQQEDLVIQRRLH*WTAHAGWIRLHHGRRPEVCGEDPXXXXXXXX 600
VLPR+ +QG+R AVLQQEDLV+QRRLH A AG +RL HGRR EV GEDP
Sbjct: 342 VLPRLPAVQGERRAVLQQEDLVVQRRLHRRQADAGRLRLRHGRRSEVRGEDPRRACAGAG 521
Query: 601 XXXXVR 618
VR
Sbjct: 522 GAAAVR 539
Score = 73.0 bits (153), Expect(2) = 6e-031
Identities = 29/40 (72%), Positives = 33/40 (82%)
Frame = +1 / +3
Query: 214 QEHRP*RCGGEGALLRDLPHGHPPGQEPPRGFKVSYGPWA 333
QE+RP*RCG EG +LR LPHGHPPGQE P F+VS+GP A
Sbjct: 135 QENRP*RCGVEG*ILRHLPHGHPPGQERPXCFQVSHGPRA 254
Score = 59.3 bits (123), Expect(2) = 5e-016
Identities = 25/37 (67%), Positives = 26/37 (70%)
Frame = -3 / -2
Query: 332 AQGP*DTLKPRGGSWPGGCPCGRSRSRAPSPPHLQGL 222
A GP DT K G S PGGCPCG+ RS PS PHLQGL
Sbjct: 253 ALGPWDTWKHXGRS*PGGCPCGKCRSI*PSTPHLQGL 143
Score = 53.3 bits (110), Expect(2) = 1e-008
Identities = 23/48 (47%), Positives = 23/48 (47%)
Frame = +3 / +2
Query: 222 QALKMWW*XXXXXXXXXXXXXXXXXXXXLQSILWSLGTRWSARWWRSG 365
QALKMW * L SI WS G RW ARWWRSG
Sbjct: 143 QALKMWC*RLNTAAFATRTSTRSRTTXVLPSIPWSQGMRWLARWWRSG 286
Score = 50.6 bits (104), Expect(2) = 5e-034
Identities = 26/66 (39%), Positives = 30/66 (45%)
Frame = -3 / -2
Query: 617 RTXXXXXXXXXXXPGSSPQTSGRRPWWRRIHPAWAVHQXXXXXXXXXXXXXTAQRWPCRG 438
RT GSSP+TS RRPW RR PA A + TA+R PC
Sbjct: 538 RTAAAPPAPAQARRGSSPRTSDRRPWRRRSRPASACRRCRRRCTTRSSCCSTARRSPCTA 359
Query: 437 CTRGST 420
+RGST
Sbjct: 358 GSRGST 341
Score = 48.7 bits (100), Expect(2) = 5e-016
Identities = 16/23 (69%), Positives = 21/23 (91%)
Frame = -1 / -3
Query: 574 DLHHKLLVDDHGGGESTLRGPSI 506
DLHH+LL+DDHGGGE+ LR P++
Sbjct: 495 DLHHELLIDDHGGGEAALRRPAV 427
Score = 26.7 bits (52), Expect(2) = 1e-008
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = +3 / +2
Query: 474 RRSGHTTTSTLMDGPRR 524
RRSG TTTST G RR
Sbjct: 395 RRSGRTTTSTPTAGRRR 445
>gb|BQ467847.1|BQ467847 HR01B24r HR Hordeum vulgare subsp. vulgare cDNA clone HR01B24
5-PRIME, mRNA sequence
Length = 558
Score = 232 bits (502), Expect = 3e-060
Identities = 104/158 (65%), Positives = 108/158 (68%)
Frame = -2 / -1
Query: 612 SSGAACSGARPAGIFTTNFWSTTMVEANPPCVGRPSV*TSLYDQIFLLQYCSTLALQGLH 433
SSGAACSGA PAGIFTTNF STTM EA PPCVG PSV*TSLYDQIFLLQYCST AL G
Sbjct: 558 SSGAACSGASPAGIFTTNF*STTMAEAKPPCVGLPSV*TSLYDQIFLLQYCSTFALHGRQ 379
Query: 432 SRQHXXXXXXXXXXXXPYLAXXXXXXXXXXXXXXXXTIGYFEAPRWFLAWWMSVWQIPQ* 253
SRQH YL T+GY EAPR FL WWMSVWQ+PQ
Sbjct: 378 SRQHPTITPTPTTSPTRYLLTSGPTSTTSPTTSCPGTMGYLEAPRSFLTWWMSVWQMPQY 199
Query: 252 STFTTTSSGPVFLRV*E*GERCPVASLAAHPTTFLSDA 139
TF TTSSGPVFLRV *GER PVASLAAHP T +S+A
Sbjct: 198 LTFNTTSSGPVFLRVYV*GERWPVASLAAHPVTVVSEA 85
Score = 157 bits (337), Expect(2) = 1e-071
Identities = 60/63 (95%), Positives = 61/63 (96%)
Frame = +2 / +2
Query: 422 CCRECSPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASTMVVDQKFVVKIPAGLAPEQA 601
CCR+C PCKANVEQYCNKKIWSYNDVYTDGRPTQGGFAS MVVDQKFVVKIPAGLAPEQA
Sbjct: 368 CCRDCRPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASAMVVDQKFVVKIPAGLAPEQA 547
Query: 602 APL 610
APL
Sbjct: 548 APL 556
Score = 133 bits (286), Expect(2) = 1e-071
Identities = 52/61 (85%), Positives = 54/61 (88%)
Frame = +2 / +2
Query: 140 ASERKVVGWAARDATGHLSPYSYTLRNTGPEDVVVKVLYCGICHTDIHQAKNHLGASKYP 319
ASE V GWAARDATGHLSPY+YTLR TGPEDVV+KV YCGICHTDIHQ KN LGASKYP
Sbjct: 86 ASETTVTGWAARDATGHLSPYTYTLRKTGPEDVVLKVKYCGICHTDIHQVKNDLGASKYP 265
Query: 320 M 322
M
Sbjct: 266 M 268
Score = 115 bits (245), Expect(2) = 6e-034
Identities = 48/67 (71%), Positives = 54/67 (80%)
Frame = -1 / -3
Query: 421 PNDHPDAYHVADAVLGHFGPDLHHLADHLVPRDHRIL*SPEVVLGLVDVRVADPAVEHLH 242
P+DHP A HVADAVL H PDLHHLA+HL+P DH IL S +VVL LVDVRVA+ AV +L
Sbjct: 367 PHDHPHADHVADAVLAHLRPDLHHLANHLMPWDHGILGSTQVVLDLVDVRVANAAVFNLQ 188
Query: 241 HHIFRAC 221
HHIFRAC
Sbjct: 187 HHIFRAC 167
Score = 81.3 bits (171), Expect(2) = 2e-030
Identities = 36/52 (69%), Positives = 41/52 (78%)
Frame = +1 / +1
Query: 421 VLPRVQPLQGQR*AVLQQEDLVIQRRLH*WTAHAGWIRLHHGRRPEVCGEDP 576
VLPR+ +QG+R AVLQQEDLV+QRRLH A AG +RL HGRR EV GEDP
Sbjct: 367 VLPRLPAVQGERRAVLQQEDLVVQRRLHRRQADAGRLRLRHGRRSEVRGEDP 522
Score = 72.5 bits (152), Expect(2) = 2e-030
Identities = 29/40 (72%), Positives = 33/40 (82%)
Frame = +1 / +1
Query: 214 QEHRP*RCGGEGALLRDLPHGHPPGQEPPRGFKVSYGPWA 333
QE+RP*RCG EG +LR LPHGHPPGQE P F+VS+GP A
Sbjct: 160 QENRP*RCGVEG*ILRHLPHGHPPGQERPGCFQVSHGPRA 279
Score = 58.8 bits (122), Expect(2) = 6e-016
Identities = 25/37 (67%), Positives = 26/37 (70%)
Frame = -3 / -2
Query: 332 AQGP*DTLKPRGGSWPGGCPCGRSRSRAPSPPHLQGL 222
A GP DT K G S PGGCPCG+ RS PS PHLQGL
Sbjct: 278 ALGPWDTWKHPGRS*PGGCPCGKCRSI*PSTPHLQGL 168
Score = 52.8 bits (109), Expect(2) = 1e-008
Identities = 22/48 (45%), Positives = 22/48 (45%)
Frame = +3 / +3
Query: 222 QALKMWW*XXXXXXXXXXXXXXXXXXXXLQSILWSLGTRWSARWWRSG 365
QALKMW * L SI WS G RW ARWWRSG
Sbjct: 168 QALKMWC*RLNTAAFATRTSTRSRTTWVLPSIPWSQGMRWLARWWRSG 311
Score = 50.1 bits (103), Expect(2) = 6e-034
Identities = 24/52 (46%), Positives = 28/52 (53%)
Frame = -3 / -2
Query: 575 GSSPQTSGRRPWWRRIHPAWAVHQXXXXXXXXXXXXXTAQRWPCRGCTRGST 420
GSSP+TS RRPW RR PA A + TA+R PC +RGST
Sbjct: 521 GSSPRTSDRRPWRRRSRPASACRRCRRRCTTRSSCCSTARRSPCTAGSRGST 366
Score = 48.7 bits (100), Expect(2) = 6e-016
Identities = 16/23 (69%), Positives = 21/23 (91%)
Frame = -1 / -3
Query: 574 DLHHKLLVDDHGGGESTLRGPSI 506
DLHH+LL+DDHGGGE+ LR P++
Sbjct: 520 DLHHELLIDDHGGGEAALRRPAV 452
Score = 26.7 bits (52), Expect(2) = 1e-008
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = +3 / +3
Query: 474 RRSGHTTTSTLMDGPRR 524
RRSG TTTST G RR
Sbjct: 420 RRSGRTTTSTPTAGRRR 470
>gb|BI958350.1|BI958350 HVSMEn0014I18f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0014I18f, mRNA sequence
Length = 671
Score = 211 bits (455), Expect = 9e-054
Identities = 98/172 (56%), Positives = 105/172 (61%)
Frame = -2 / -1
Query: 654 PKCFSGLYTVTPAHSSGAACSGARPAGIFTTNFWSTTMVEANPPCVGRPSV*TSLYDQIF 475
P + +V P + G A SGA PAGI NF S TM EA PPCVG PSV* SLYDQIF
Sbjct: 593 PYPLHXMNSVIPPLTIGPAXSGASPAGILPANF*SRTMAEAKPPCVGLPSV*MSLYDQIF 414
Query: 474 LLQYCSTLALQGLHSRQHXXXXXXXXXXXXPYLAXXXXXXXXXXXXXXXXTIGYFEAPRW 295
LLQYCST AL G SRQH YL T+GY EAPR
Sbjct: 413 LLQYCSTFALHGRQSRQHPTITPTPTTSPTRYLLTSGPTSTTSPTTSCPGTMGYLEAPRS 234
Query: 294 FLAWWMSVWQIPQ*STFTTTSSGPVFLRV*E*GERCPVASLAAHPTTFLSDA 139
FL WWMSVWQ+PQ TF TTSSGPVFLRV *GER PVASLAAHP T +S+A
Sbjct: 233 FLTWWMSVWQMPQYLTFNTTSSGPVFLRVYV*GERWPVASLAAHPVTVVSEA 78
Score = 151 bits (325), Expect(2) = 6e-070
Identities = 55/71 (77%), Positives = 62/71 (87%)
Frame = +2 / +1
Query: 422 CCRECSPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASTMVVDQKFVVKIPAGLAPEQA 601
CCR+C PCKANVEQYCNKKIWSYND+YTDGRPTQGGFAS MV+DQKF KIPAGLAPE A
Sbjct: 361 CCRDCRPCKANVEQYCNKKIWSYNDIYTDGRPTQGGFASAMVLDQKFAGKIPAGLAPEXA 540
Query: 602 APLLCAGVTVY 634
P++ G+T +
Sbjct: 541 GPMVSGGITEF 573
Score = 133 bits (286), Expect(2) = 6e-070
Identities = 52/61 (85%), Positives = 54/61 (88%)
Frame = +2 / +1
Query: 140 ASERKVVGWAARDATGHLSPYSYTLRNTGPEDVVVKVLYCGICHTDIHQAKNHLGASKYP 319
ASE V GWAARDATGHLSPY+YTLR TGPEDVV+KV YCGICHTDIHQ KN LGASKYP
Sbjct: 79 ASETTVTGWAARDATGHLSPYTYTLRKTGPEDVVLKVKYCGICHTDIHQVKNDLGASKYP 258
Query: 320 M 322
M
Sbjct: 259 M 261
Score = 115 bits (245), Expect(2) = 2e-031
Identities = 48/67 (71%), Positives = 54/67 (80%)
Frame = -1 / -3
Query: 421 PNDHPDAYHVADAVLGHFGPDLHHLADHLVPRDHRIL*SPEVVLGLVDVRVADPAVEHLH 242
P+DHP A HVADAVL H PDLHHLA+HL+P DH IL S +VVL LVDVRVA+ AV +L
Sbjct: 360 PHDHPHADHVADAVLAHLRPDLHHLANHLMPWDHGILGSTQVVLDLVDVRVANAAVFNLQ 181
Query: 241 HHIFRAC 221
HHIFRAC
Sbjct: 180 HHIFRAC 160
Score = 72.5 bits (152), Expect(2) = 1e-026
Identities = 29/40 (72%), Positives = 33/40 (82%)
Frame = +1 / +3
Query: 214 QEHRP*RCGGEGALLRDLPHGHPPGQEPPRGFKVSYGPWA 333
QE+RP*RCG EG +LR LPHGHPPGQE P F+VS+GP A
Sbjct: 153 QENRP*RCGVEG*ILRHLPHGHPPGQERPGCFQVSHGPRA 272
Score = 68.0 bits (142), Expect(2) = 1e-026
Identities = 32/52 (61%), Positives = 37/52 (71%)
Frame = +1 / +3
Query: 421 VLPRVQPLQGQR*AVLQQEDLVIQRRLH*WTAHAGWIRLHHGRRPEVCGEDP 576
VLPR+ +QG+R AVLQQEDLV+QR LH A AG +RL HG R EV DP
Sbjct: 360 VLPRLPAVQGERRAVLQQEDLVVQRHLHRRQADAGRLRLRHGPRSEVRW*DP 515
Score = 58.8 bits (122), Expect(2) = 1e-012
Identities = 25/37 (67%), Positives = 26/37 (70%)
Frame = -3 / -2
Query: 332 AQGP*DTLKPRGGSWPGGCPCGRSRSRAPSPPHLQGL 222
A GP DT K G S PGGCPCG+ RS PS PHLQGL
Sbjct: 271 ALGPWDTWKHPGRS*PGGCPCGKCRSI*PSTPHLQGL 161
Score = 52.8 bits (109), Expect(2) = 1e-008
Identities = 22/48 (45%), Positives = 22/48 (45%)
Frame = +3 / +2
Query: 222 QALKMWW*XXXXXXXXXXXXXXXXXXXXLQSILWSLGTRWSARWWRSG 365
QALKMW * L SI WS G RW ARWWRSG
Sbjct: 161 QALKMWC*RLNTAAFATRTSTRSRTTWVLPSIPWSQGMRWLARWWRSG 304
Score = 41.4 bits (84), Expect(2) = 2e-031
Identities = 24/71 (33%), Positives = 30/71 (42%)
Frame = -3 / -2
Query: 632 TPSRQRTXXXXXXXXXXXPGSSPQTSGRRPWWRRIHPAWAVHQXXXXXXXXXXXXXTAQR 453
TP +R+ GS +TS R PW RR PA A + TA+R
Sbjct: 571 TPLFRRSPSAPPVQAQARRGSYQRTSDRGPWRRRSRPASACRRCRCRCTTRSSCCSTARR 392
Query: 452 WPCRGCTRGST 420
PC +RGST
Sbjct: 391 SPCTAGSRGST 359
Score = 38.2 bits (77), Expect(2) = 1e-012
Identities = 13/23 (56%), Positives = 19/23 (82%)
Frame = -1 / -3
Query: 574 DLHHKLLVDDHGGGESTLRGPSI 506
DL +LL++DHGGGE+ LR P++
Sbjct: 513 DLTSELLIEDHGGGEAALRRPAV 445
Score = 26.7 bits (52), Expect(2) = 1e-008
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = +3 / +2
Query: 474 RRSGHTTTSTLMDGPRR 524
RRSG TTTST G RR
Sbjct: 413 RRSGRTTTSTPTAGRRR 463
>gb|CK123411.1|CK123411 BES1824103p14 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010P143 5-PRIME, mRNA sequence
Length = 620
Score = 179 bits (385), Expect(3) = 4e-054
Identities = 80/130 (61%), Positives = 84/130 (64%)
Frame = -2 / -2
Query: 528 PPCVGRPSV*TSLYDQIFLLQYCSTLALQGLHSRQHXXXXXXXXXXXXPYLAXXXXXXXX 349
PPCVG PSV*TSLYDQIFLLQYCST AL G SRQH YL
Sbjct: 460 PPCVGLPSV*TSLYDQIFLLQYCSTFALHGRQSRQHPTITPTPTTSPTRYLLTSGPTSTT 281
Query: 348 XXXXXXXXTIGYFEAPRWFLAWWMSVWQIPQ*STFTTTSSGPVFLRV*E*GERCPVASLA 169
T+GY EAPR FL WWMSVWQ+PQ TF TTSSGPVFLRV *GER PVASLA
Sbjct: 280 SPTTSCPGTMGYLEAPRSFLTWWMSVWQMPQYLTFNTTSSGPVFLRVYV*GERWPVASLA 101
Query: 168 AHPTTFLSDA 139
AHP T +S+A
Sbjct: 100 AHPVTVVSEA 71
Score = 133 bits (286), Expect(5) = 5e-067
Identities = 52/61 (85%), Positives = 54/61 (88%)
Frame = +2 / +3
Query: 140 ASERKVVGWAARDATGHLSPYSYTLRNTGPEDVVVKVLYCGICHTDIHQAKNHLGASKYP 319
ASE V GWAARDATGHLSPY+YTLR TGPEDVV+KV YCGICHTDIHQ KN LGASKYP
Sbjct: 72 ASETTVTGWAARDATGHLSPYTYTLRKTGPEDVVLKVKYCGICHTDIHQVKNDLGASKYP 251
Query: 320 M 322
M
Sbjct: 252 M 254
Score = 115 bits (245), Expect(2) = 3e-026
Identities = 48/67 (71%), Positives = 54/67 (80%)
Frame = -1 / -1
Query: 421 PNDHPDAYHVADAVLGHFGPDLHHLADHLVPRDHRIL*SPEVVLGLVDVRVADPAVEHLH 242
P+DHP A HVADAVL H PDLHHLA+HL+P DH IL S +VVL LVDVRVA+ AV +L
Sbjct: 353 PHDHPHADHVADAVLAHLRPDLHHLANHLMPWDHGILGSTQVVLDLVDVRVANAAVFNLQ 174
Query: 241 HHIFRAC 221
HHIFRAC
Sbjct: 173 HHIFRAC 153
Score = 101 bits (216), Expect(5) = 5e-067
Identities = 35/37 (94%), Positives = 36/37 (97%)
Frame = +2 / +3
Query: 422 CCRECSPCKANVEQYCNKKIWSYNDVYTDGRPTQGGF 532
CCR+C PCKANVEQYCNKKIWSYNDVYTDGRPTQGGF
Sbjct: 354 CCRDCRPCKANVEQYCNKKIWSYNDVYTDGRPTQGGF 464
Score = 72.5 bits (152), Expect(2) = 3e-022
Identities = 29/40 (72%), Positives = 33/40 (82%)
Frame = +1 / +2
Query: 214 QEHRP*RCGGEGALLRDLPHGHPPGQEPPRGFKVSYGPWA 333
QE+RP*RCG EG +LR LPHGHPPGQE P F+VS+GP A
Sbjct: 146 QENRP*RCGVEG*ILRHLPHGHPPGQERPGCFQVSHGPRA 265
Score = 58.8 bits (122), Expect(2) = 6e-008
Identities = 25/37 (67%), Positives = 26/37 (70%)
Frame = -3 / -3
Query: 332 AQGP*DTLKPRGGSWPGGCPCGRSRSRAPSPPHLQGL 222
A GP DT K G S PGGCPCG+ RS PS PHLQGL
Sbjct: 264 ALGPWDTWKHPGRS*PGGCPCGKCRSI*PSTPHLQGL 154
Score = 53.3 bits (110), Expect(2) = 3e-022
Identities = 24/35 (68%), Positives = 28/35 (80%)
Frame = +1 / +2
Query: 421 VLPRVQPLQGQR*AVLQQEDLVIQRRLH*WTAHAG 525
VLPR+ +QG+R AVLQQEDLV+QRRLH A AG
Sbjct: 353 VLPRLPAVQGERRAVLQQEDLVVQRRLHRRQADAG 457
Score = 52.8 bits (109), Expect(3) = 1e-008
Identities = 22/48 (45%), Positives = 22/48 (45%)
Frame = +3 / +1
Query: 222 QALKMWW*XXXXXXXXXXXXXXXXXXXXLQSILWSLGTRWSARWWRSG 365
QALKMW * L SI WS G RW ARWWRSG
Sbjct: 154 QALKMWC*RLNTAAFATRTSTRSRTTWVLPSIPWSQGMRWLARWWRSG 297
Score = 45.1 bits (92), Expect(5) = 5e-067
Identities = 18/22 (81%), Positives = 18/22 (81%)
Frame = +2 / +3
Query: 575 PAGLAPEQAAPLLCAGVTVYSP 640
P GLAP QAAPLLCAGVTV P
Sbjct: 510 PPGLAPXQAAPLLCAGVTVVQP 575
Score = 40.5 bits (82), Expect(3) = 4e-054
Identities = 17/22 (77%), Positives = 17/22 (77%)
Frame = -2 / -2
Query: 639 GLYTVTPAHSSGAACSGARPAG 574
G TVTPAHSSGAA SGA P G
Sbjct: 574 GCTTVTPAHSSGAAXSGAXPGG 509
Score = 31.8 bits (63), Expect(3) = 4e-054
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = -1 / -3
Query: 562 KLLVDDHGGGES 527
KLL+DDHGGGES
Sbjct: 495 KLLIDDHGGGES 460
Score = 26.7 bits (52), Expect(3) = 1e-008
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = +3 / +1
Query: 474 RRSGHTTTSTLMDGPRR 524
RRSG TTTST G RR
Sbjct: 406 RRSGRTTTSTPTAGRRR 456
Score = 25.8 bits (50), Expect(5) = 5e-067
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +2 / +1
Query: 521 QGGFASTMVVDQKF 562
+ FAS MVVDQKF
Sbjct: 454 RAAFASAMVVDQKF 495
Score = 24.4 bits (47), Expect(5) = 5e-067
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +2 / +2
Query: 635 SPLKHFGLTNP 667
+PLKHFGL P
Sbjct: 572 APLKHFGLMTP 604
Score = 24.4 bits (47), Expect(2) = 3e-026
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -3 / -2
Query: 563 QTSGRRPWWRRIHP 522
+TS RRPW RR P
Sbjct: 496 ETSDRRPWRRRKPP 455
Score = 21.7 bits (41), Expect(3) = 1e-008
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +2 / +2
Query: 554 QKFVVKIPAG 583
+ FVVKIPAG
Sbjct: 488 RSFVVKIPAG 517
Score = 21.7 bits (41), Expect(2) = 6e-008
Identities = 6/10 (60%), Positives = 7/10 (70%)
Frame = -2 / -3
Query: 666 GFVSPKCFSG 637
G + PKCF G
Sbjct: 603 GVIXPKCFXG 574
>gb|BQ660971.1|BQ660971 HM01F04w HM Hordeum vulgare subsp. vulgare cDNA clone HM01F04
3-PRIME, mRNA sequence
Length = 600
Score = 254 bits (549), Expect = 9e-067
Identities = 112/156 (71%), Positives = 119/156 (76%)
Frame = +2 / -2
Query: 725 AKAMGHHVTVISSSSKKRAEAMDHLGADAYLVXXXXXXXXXXXXXXXYIIDTVPVHHPLE 904
AK+MGHHVTVISSS+KKRAEA+D LGAD YLV YIIDTVPV HPLE
Sbjct: 581 AKSMGHHVTVISSSNKKRAEAVDDLGADEYLVSSDADQMAAAADSLDYIIDTVPVKHPLE 402
Query: 905 PYXXXXXXXXXXXXXXXIGEPLSFVSPMVMLGRKAITGSFIGSIDETAEVLQFCVDKGLT 1084
PY I EPLSFVSPMVMLGRK ITGSFIGS+DET EVL+FCVDKGLT
Sbjct: 401 PYLALLKMDGKLVLMGVIAEPLSFVSPMVMLGRKTITGSFIGSMDETEEVLKFCVDKGLT 222
Query: 1085 SQIEVVKMGYVNEALERLERNDVRYRFVVDVAGSNV 1192
SQIEVVKM YVN+ALERLERNDVRYRFVVDVAGSN+
Sbjct: 221 SQIEVVKMDYVNQALERLERNDVRYRFVVDVAGSNL 114
Score = 155 bits (332), Expect = 8e-037
Identities = 77/130 (59%), Positives = 80/130 (61%)
Frame = -2 / +1
Query: 1107 ILTTSIWEVSPLSTQN*STSAVSSMLPMKLPVMAFRPSITMGDTKLRGXXXXXXXXXXXX 928
ILTTSI EVSPLSTQN TS+VSSMLPMKLPVM F PSIT+GDTKL G
Sbjct: 199 ILTTSICEVSPLSTQNLRTSSVSSMLPMKLPVMVFLPSITIGDTKLSGSAITPISTSLPS 378
Query: 927 XXXXXXXXXSGWCTGTVXXXXXXXXXXXXXXXXXELTRYASAPRWSIASARFLDDELITV 748
SG TGTV ELTRY+SAPR S ASARFL DELITV
Sbjct: 379 ILSSAR*GSSGCFTGTVSMM*SSESAAAAIWSASELTRYSSAPRSSTASARFLLDELITV 558
Query: 747 TWWPMALATF 718
TWWPM LATF
Sbjct: 559 TWWPMDLATF 588
Score = 95.5 bits (202), Expect(2) = 3e-024
Identities = 43/70 (61%), Positives = 47/70 (67%)
Frame = -1 / +3
Query: 1141 LQPLQRXXXXXXXXXXXLGGEPLVDAELKHLSGLVDAADEAPRDGLPPQHHHGRHEAQGL 962
L+PL+R L GEPLVDAEL+ L LV A DEAPRDGLPPQHHH HEA+ L
Sbjct: 165 LEPLERLVDVVHLDDLDLRGEPLVDAELEDLLRLVHAPDEAPRDGLPPQHHHWGHEAERL 344
Query: 961 ADDAQQHELA 932
D A QHELA
Sbjct: 345 RDHAHQHELA 374
Score = 45.5 bits (93), Expect(2) = 5e-009
Identities = 19/27 (70%), Positives = 20/27 (74%)
Frame = +1 / -1
Query: 1027 RQHRRDR*GASVLRRQGAHLPDRGGQD 1107
R+H RD G VLRRQGAHL DRG QD
Sbjct: 279 REHGRDGGGPQVLRRQGAHLADRGRQD 199
Score = 40.5 bits (82), Expect(2) = 3e-024
Identities = 17/22 (77%), Positives = 18/22 (81%)
Frame = -1 / +3
Query: 784 LRALLGRRADHRHVVAHGLGYL 719
L LL RADHRHVVAHGLG+L
Sbjct: 522 LGPLLVGRADHRHVVAHGLGHL 587
Score = 38.6 bits (78), Expect(2) = 5e-009
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = +1 / -1
Query: 727 QGHGPPRDGDQLVVQEA 777
Q HGPPRDGDQLV QEA
Sbjct: 579 QVHGPPRDGDQLVQQEA 529
Score = 36.8 bits (74), Expect = 0.31
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = -3 / +2
Query: 776 ASWTTS*SPSRGGPWPW 726
AS TS*SPSRGGPW W
Sbjct: 530 ASCWTS*SPSRGGPWTW 580
>gb|CB881341.1|CB881341 HM09I05w HM Hordeum vulgare subsp. vulgare cDNA clone HM09I05
3-PRIME, mRNA sequence
Length = 621
Score = 254 bits (549), Expect = 9e-067
Identities = 112/156 (71%), Positives = 119/156 (76%)
Frame = +2 / -2
Query: 725 AKAMGHHVTVISSSSKKRAEAMDHLGADAYLVXXXXXXXXXXXXXXXYIIDTVPVHHPLE 904
AK+MGHHVTVISSS+KKRAEA+D LGAD YLV YIIDTVPV HPLE
Sbjct: 602 AKSMGHHVTVISSSNKKRAEAVDDLGADEYLVSSDADQMAAAADSLDYIIDTVPVKHPLE 423
Query: 905 PYXXXXXXXXXXXXXXXIGEPLSFVSPMVMLGRKAITGSFIGSIDETAEVLQFCVDKGLT 1084
PY I EPLSFVSPMVMLGRK ITGSFIGS+DET EVL+FCVDKGLT
Sbjct: 422 PYLALLKMDGKLVLMGVIAEPLSFVSPMVMLGRKTITGSFIGSMDETEEVLKFCVDKGLT 243
Query: 1085 SQIEVVKMGYVNEALERLERNDVRYRFVVDVAGSNV 1192
SQIEVVKM YVN+ALERLERNDVRYRFVVDVAGSN+
Sbjct: 242 SQIEVVKMDYVNQALERLERNDVRYRFVVDVAGSNL 135
Score = 155 bits (332), Expect = 8e-037
Identities = 77/130 (59%), Positives = 80/130 (61%)
Frame = -2 / +1
Query: 1107 ILTTSIWEVSPLSTQN*STSAVSSMLPMKLPVMAFRPSITMGDTKLRGXXXXXXXXXXXX 928
ILTTSI EVSPLSTQN TS+VSSMLPMKLPVM F PSIT+GDTKL G
Sbjct: 220 ILTTSICEVSPLSTQNLRTSSVSSMLPMKLPVMVFLPSITIGDTKLSGSAITPISTSLPS 399
Query: 927 XXXXXXXXXSGWCTGTVXXXXXXXXXXXXXXXXXELTRYASAPRWSIASARFLDDELITV 748
SG TGTV ELTRY+SAPR S ASARFL DELITV
Sbjct: 400 ILSSAR*GSSGCFTGTVSMM*SSESAAAAIWSASELTRYSSAPRSSTASARFLLDELITV 579
Query: 747 TWWPMALATF 718
TWWPM LATF
Sbjct: 580 TWWPMDLATF 609
Score = 95.5 bits (202), Expect(2) = 3e-024
Identities = 43/70 (61%), Positives = 47/70 (67%)
Frame = -1 / +3
Query: 1141 LQPLQRXXXXXXXXXXXLGGEPLVDAELKHLSGLVDAADEAPRDGLPPQHHHGRHEAQGL 962
L+PL+R L GEPLVDAEL+ L LV A DEAPRDGLPPQHHH HEA+ L
Sbjct: 186 LEPLERLVDVVHLDDLDLRGEPLVDAELEDLLRLVHAPDEAPRDGLPPQHHHWGHEAERL 365
Query: 961 ADDAQQHELA 932
D A QHELA
Sbjct: 366 RDHAHQHELA 395
Score = 45.5 bits (93), Expect(2) = 5e-009
Identities = 19/27 (70%), Positives = 20/27 (74%)
Frame = +1 / -1
Query: 1027 RQHRRDR*GASVLRRQGAHLPDRGGQD 1107
R+H RD G VLRRQGAHL DRG QD
Sbjct: 300 REHGRDGGGPQVLRRQGAHLADRGRQD 220
Score = 40.5 bits (82), Expect(2) = 3e-024
Identities = 17/22 (77%), Positives = 18/22 (81%)
Frame = -1 / +3
Query: 784 LRALLGRRADHRHVVAHGLGYL 719
L LL RADHRHVVAHGLG+L
Sbjct: 543 LGPLLVGRADHRHVVAHGLGHL 608
Score = 38.6 bits (78), Expect(2) = 5e-009
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = +1 / -1
Query: 727 QGHGPPRDGDQLVVQEA 777
Q HGPPRDGDQLV QEA
Sbjct: 600 QVHGPPRDGDQLVQQEA 550
Score = 36.8 bits (74), Expect = 0.31
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = -3 / +2
Query: 776 ASWTTS*SPSRGGPWPW 726
AS TS*SPSRGGPW W
Sbjct: 551 ASCWTS*SPSRGGPWTW 601
>gb|AL506219.1|AL506219 AL506219 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY02G17T 5',
mRNA sequence
Length = 538
Score = 192 bits (413), Expect(2) = 3e-052
Identities = 86/138 (62%), Positives = 90/138 (65%)
Frame = -2 / -2
Query: 552 STTMVEANPPCVGRPSV*TSLYDQIFLLQYCSTLALQGLHSRQHXXXXXXXXXXXXPYLA 373
STTM EA PPCVG PSV*TSLYDQIFLLQYCST AL G SRQH YL
Sbjct: 462 STTMAEAKPPCVGLPSV*TSLYDQIFLLQYCSTFALHGRQSRQHPTITPTPTTSPTRYLL 283
Query: 372 XXXXXXXXXXXXXXXXTIGYFEAPRWFLAWWMSVWQIPQ*STFTTTSSGPVFLRV*E*GE 193
T+GY EAPR FL WWMSVWQ+PQ TF TTSSGPVFLRV *GE
Sbjct: 282 TSGPTSTTSPTTSCPGTMGYLEAPRSFLTWWMSVWQMPQYLTFNTTSSGPVFLRVYV*GE 103
Query: 192 RCPVASLAAHPTTFLSDA 139
R PVASLAAHP T +S+A
Sbjct: 102 RWPVASLAAHPVTVVSEA 49
Score = 133 bits (286), Expect(3) = 3e-063
Identities = 52/61 (85%), Positives = 54/61 (88%)
Frame = +2 / +2
Query: 140 ASERKVVGWAARDATGHLSPYSYTLRNTGPEDVVVKVLYCGICHTDIHQAKNHLGASKYP 319
ASE V GWAARDATGHLSPY+YTLR TGPEDVV+KV YCGICHTDIHQ KN LGASKYP
Sbjct: 50 ASETTVTGWAARDATGHLSPYTYTLRKTGPEDVVLKVKYCGICHTDIHQVKNDLGASKYP 229
Query: 320 M 322
M
Sbjct: 230 M 232
Score = 116 bits (249), Expect(3) = 3e-063
Identities = 42/46 (91%), Positives = 44/46 (95%)
Frame = +2 / +2
Query: 422 CCRECSPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASTMVVDQK 559
CCR+C PCKANVEQYCNKKIWSYNDVYTDGRPTQGGFAS MVVDQ+
Sbjct: 332 CCRDCRPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASAMVVDQE 469
Score = 115 bits (245), Expect(3) = 2e-031
Identities = 48/67 (71%), Positives = 54/67 (80%)
Frame = -1 / -1
Query: 421 PNDHPDAYHVADAVLGHFGPDLHHLADHLVPRDHRIL*SPEVVLGLVDVRVADPAVEHLH 242
P+DHP A HVADAVL H PDLHHLA+HL+P DH IL S +VVL LVDVRVA+ AV +L
Sbjct: 331 PHDHPHADHVADAVLAHLRPDLHHLANHLMPWDHGILGSTQVVLDLVDVRVANAAVFNLQ 152
Query: 241 HHIFRAC 221
HHIFRAC
Sbjct: 151 HHIFRAC 131
Score = 72.5 bits (152), Expect(3) = 1e-028
Identities = 29/40 (72%), Positives = 33/40 (82%)
Frame = +1 / +1
Query: 214 QEHRP*RCGGEGALLRDLPHGHPPGQEPPRGFKVSYGPWA 333
QE+RP*RCG EG +LR LPHGHPPGQE P F+VS+GP A
Sbjct: 124 QENRP*RCGVEG*ILRHLPHGHPPGQERPGCFQVSHGPRA 243
Score = 68.0 bits (142), Expect(3) = 1e-028
Identities = 30/44 (68%), Positives = 35/44 (79%)
Frame = +1 / +1
Query: 421 VLPRVQPLQGQR*AVLQQEDLVIQRRLH*WTAHAGWIRLHHGRR 552
VLPR+ +QG+R AVLQQEDLV+QRRLH A AG +RL HGRR
Sbjct: 331 VLPRLPAVQGERRAVLQQEDLVVQRRLHRRQADAGRLRLRHGRR 462
Score = 58.8 bits (122), Expect(2) = 1e-011
Identities = 25/37 (67%), Positives = 26/37 (70%)
Frame = -3 / -3
Query: 332 AQGP*DTLKPRGGSWPGGCPCGRSRSRAPSPPHLQGL 222
A GP DT K G S PGGCPCG+ RS PS PHLQGL
Sbjct: 242 ALGPWDTWKHPGRS*PGGCPCGKCRSI*PSTPHLQGL 132
Score = 52.8 bits (109), Expect(2) = 1e-008
Identities = 22/48 (45%), Positives = 22/48 (45%)
Frame = +3 / +3
Query: 222 QALKMWW*XXXXXXXXXXXXXXXXXXXXLQSILWSLGTRWSARWWRSG 365
QALKMW * L SI WS G RW ARWWRSG
Sbjct: 132 QALKMWC*RLNTAAFATRTSTRSRTTWVLPSIPWSQGMRWLARWWRSG 275
Score = 36.3 bits (73), Expect(3) = 2e-031
Identities = 18/44 (40%), Positives = 21/44 (47%)
Frame = -3 / -3
Query: 551 RRPWWRRIHPAWAVHQXXXXXXXXXXXXXTAQRWPCRGCTRGST 420
RRPW RR PA A + TA+R PC +RGST
Sbjct: 461 RRPWRRRSRPASACRRCRRRCTTRSSCCSTARRSPCTAGSRGST 330
Score = 34.5 bits (69), Expect(2) = 1e-011
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = -1 / -1
Query: 556 LVDDHGGGESTLRGPSI 506
L+DDHGGGE+ LR P++
Sbjct: 466 LIDDHGGGEAALRRPAV 416
Score = 34.5 bits (69), Expect(2) = 3e-052
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -2 / -3
Query: 621 PAHSSGAACSGARPAGIF 568
P ++GAACSGA PAGIF
Sbjct: 533 PRTAAGAACSGASPAGIF 480
Score = 31.3 bits (62), Expect(3) = 3e-063
Identities = 13/18 (72%), Positives = 13/18 (72%)
Frame = +2 / +1
Query: 569 KIPAGLAPEQAAPLLCAG 622
KIPAGLAPE AAP G
Sbjct: 481 KIPAGLAPEXAAPAAVRG 534
Score = 26.7 bits (52), Expect(2) = 1e-008
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = +3 / +3
Query: 474 RRSGHTTTSTLMDGPRR 524
RRSG TTTST G RR
Sbjct: 384 RRSGRTTTSTPTAGRRR 434
Score = 24.9 bits (48), Expect(3) = 1e-028
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +2 / +2
Query: 575 PAGLAPEQAAPLLCAGV 625
P GL PLLCAGV
Sbjct: 488 PPGLRRSXRRPLLCAGV 538
Score = 23.1 bits (44), Expect(3) = 2e-031
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = -2 / -2
Query: 624 TPAHSSGAACSGARPAG 574
TPAHSSG +P G
Sbjct: 537 TPAHSSGRRXLRRKPGG 487
>gb|BF065565.1|BF065565 HV_CEb0012M15f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0012M15f, mRNA sequence
Length = 745
Score = 195 bits (420), Expect(2) = 1e-060
Identities = 75/82 (91%), Positives = 77/82 (93%)
Frame = +2 / +1
Query: 422 CCRECSPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASTMVVDQKFVVKIPAGLAPEQA 601
CCR+C PCKANVEQYCNKKIWSYNDVYTDGRPTQGGFAS MVVDQKFVVKIPAGLAPE A
Sbjct: 259 CCRDCPPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASAMVVDQKFVVKIPAGLAPEHA 438
Query: 602 APLLCAGVTVYSPLKHFGLTNP 667
APLLCAGVTVYSPLKH GL +P
Sbjct: 439 APLLCAGVTVYSPLKHLGLIDP 504
Score = 171 bits (368), Expect(2) = 8e-055
Identities = 73/97 (75%), Positives = 74/97 (76%)
Frame = -2 / -3
Query: 666 GFVSPKCFSGLYTVTPAHSSGAACSGARPAGIFTTNFWSTTMVEANPPCVGRPSV*TSLY 487
G +SPKCFSGLYTVTPAHSSGAACSGA PAGIFTTNF STTM EA PPCVG PSV*TSLY
Sbjct: 503 GSISPKCFSGLYTVTPAHSSGAACSGASPAGIFTTNF*STTMAEAKPPCVGLPSV*TSLY 324
Query: 486 DQIFLLQYCSTLALQGLHSRQHXXXXXXXXXXXXPYL 376
DQIFLLQYCST AL G SRQH YL
Sbjct: 323 DQIFLLQYCSTFALHGGQSRQHPTITPTPTTSPTRYL 213
Score = 106 bits (227), Expect(2) = 8e-027
Identities = 50/80 (62%), Positives = 55/80 (68%)
Frame = +1 / +3
Query: 421 VLPRVQPLQGQR*AVLQQEDLVIQRRLH*WTAHAGWIRLHHGRRPEVCGEDPXXXXXXXX 600
VLPR+ +QG+R AVLQQEDLV+QRRLH A AG +RL HGRR EV GEDP
Sbjct: 258 VLPRLPAVQGERRAVLQQEDLVVQRRLHRRQADAGRLRLRHGRRSEVRGEDPRRACAGAC 437
Query: 601 XXXXVRWRDGVQPAEALWAD 660
VR RDGVQPAEAL AD
Sbjct: 438 GAAAVRGRDGVQPAEALRAD 497
Score = 63.8 bits (133), Expect(2) = 8e-055
Identities = 27/35 (77%), Positives = 28/35 (80%)
Frame = -2 / -2
Query: 822 LTRYASAPRWSIASARFLDDELITVTWWPMALATF 718
L RY SAPR S ASARFL D+ ITVTWWPM LATF
Sbjct: 660 LKRYLSAPRSSTASARFLLDDCITVTWWPMDLATF 556
Score = 62.9 bits (131), Expect(3) = 8e-022
Identities = 31/72 (43%), Positives = 34/72 (47%)
Frame = -3 / -1
Query: 635 CTPSRQRTXXXXXXXXXXXPGSSPQTSGRRPWWRRIHPAWAVHQXXXXXXXXXXXXXTAQ 456
CTPSR RT GSSP+TS RRPW RR PA A + TA
Sbjct: 472 CTPSRPRTAAAPHAPAQARRGSSPRTSDRRPWRRRSRPASACRRCRRRCTTRSSCCSTAL 293
Query: 455 RWPCRGCTRGST 420
R PC +RGST
Sbjct: 292 RSPCTAGSRGST 257
Score = 59.7 bits (124), Expect(2) = 1e-060
Identities = 24/31 (77%), Positives = 28/31 (90%)
Frame = +2 / +2
Query: 725 AKAMGHHVTVISSSSKKRAEAMDHLGADAYL 817
AK+MGHHVTV+ SS+KKRAEA+D LGAD YL
Sbjct: 563 AKSMGHHVTVMQSSNKKRAEAVDDLGADKYL 655
Score = 48.7 bits (100), Expect(2) = 3e-008
Identities = 16/23 (69%), Positives = 21/23 (91%)
Frame = -1 / -2
Query: 574 DLHHKLLVDDHGGGESTLRGPSI 506
DLHH+LL+DDHGGGE+ LR P++
Sbjct: 411 DLHHELLIDDHGGGEAALRRPAV 343
Score = 46.0 bits (94), Expect(3) = 8e-022
Identities = 17/23 (73%), Positives = 18/23 (78%)
Frame = -1 / -2
Query: 421 PNDHPDAYHVADAVLGHFGPDLH 353
P+DHP A HVADAVL H PDLH
Sbjct: 258 PHDHPHADHVADAVLAHLRPDLH 190
Score = 34.5 bits (69), Expect(2) = 8e-027
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +1 / +1
Query: 727 QGHGPPRDGDQLVVQEA 777
Q HGPPRDGD +V QEA
Sbjct: 565 QVHGPPRDGDAVVQQEA 615
Score = 33.1 bits (66), Expect(2) = 3e-008
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = -3 / -3
Query: 776 ASWTTS*SPSRGGPWPW 726
AS T+ SPSRGGPW W
Sbjct: 614 ASCWTTASPSRGGPWTW 564
Score = 33.1 bits (66), Expect(3) = 8e-022
Identities = 14/21 (66%), Positives = 15/21 (71%)
Frame = -1 / -1
Query: 784 LRALLGRRADHRHVVAHGLGY 722
L LL R HRHVVAHGLG+
Sbjct: 622 LGPLLVGRLHHRHVVAHGLGH 560
>gb|BI957127.1|BI957127 HVSMEn0007J20f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0007J20f,
mRNA sequence
Length = 876
Score = 232 bits (500), Expect = 5e-060
Identities = 104/151 (68%), Positives = 110/151 (72%)
Frame = +2 / +2
Query: 725 AKAMGHHVTVISSSSKKRAEAMDHLGADAYLVXXXXXXXXXXXXXXXYIIDTVPVHHPLE 904
AK+MGHHVTVISSS++KRAEA+D LGAD YLV YIIDTVPV HPLE
Sbjct: 8 AKSMGHHVTVISSSNRKRAEAVDDLGADEYLVSSDADQMAAAADSLDYIIDTVPVKHPLE 187
Query: 905 PYXXXXXXXXXXXXXXXIGEPLSFVSPMVMLGRKAITGSFIGSIDETAEVLQFCVDKGLT 1084
PY I EPLSFVSPMVMLGRK ITGSFIGS+DET EVL+FCVDKGLT
Sbjct: 188 PYLALLKMDGKLVLMGVIAEPLSFVSPMVMLGRKTITGSFIGSMDETEEVLKFCVDKGLT 367
Query: 1085 SQIEVVKMGYVNEALERLERNDVRYRFVVDV 1177
SQI VVKM YVN ALERLERNDVRYRF V V
Sbjct: 368 SQIYVVKMDYVNHALERLERNDVRYRFGVYV 460
Score = 151 bits (324), Expect = 1e-035
Identities = 76/130 (58%), Positives = 79/130 (60%)
Frame = -2 / -1
Query: 1107 ILTTSIWEVSPLSTQN*STSAVSSMLPMKLPVMAFRPSITMGDTKLRGXXXXXXXXXXXX 928
ILTT I EVSPLSTQN TS+VSSMLPMKLPVM F PSIT+GDTKL G
Sbjct: 390 ILTT*ICEVSPLSTQNLRTSSVSSMLPMKLPVMVFLPSITIGDTKLSGSAITPISTSLPS 211
Query: 927 XXXXXXXXXSGWCTGTVXXXXXXXXXXXXXXXXXELTRYASAPRWSIASARFLDDELITV 748
SG TGTV ELTRY+SAPR S ASARFL DELITV
Sbjct: 210 ILSSAR*GSSGCFTGTVSMM*SSESAAAAIWSASELTRYSSAPRSSTASARFLLDELITV 31
Query: 747 TWWPMALATF 718
TWWPM LATF
Sbjct: 30 TWWPMDLATF 1
Score = 95.5 bits (202), Expect(2) = 1e-023
Identities = 43/70 (61%), Positives = 47/70 (67%)
Frame = -1 / -3
Query: 1141 LQPLQRXXXXXXXXXXXLGGEPLVDAELKHLSGLVDAADEAPRDGLPPQHHHGRHEAQGL 962
L+PL+R L GEPLVDAEL+ L LV A DEAPRDGLPPQHHH HEA+ L
Sbjct: 424 LEPLERMVDVVHLDDIDLRGEPLVDAELEDLLRLVHAPDEAPRDGLPPQHHHWGHEAERL 245
Query: 961 ADDAQQHELA 932
D A QHELA
Sbjct: 244 RDHAHQHELA 215
Score = 38.6 bits (78), Expect(2) = 1e-023
Identities = 14/15 (93%), Positives = 15/15 (100%)
Frame = -1 / -3
Query: 763 RADHRHVVAHGLGYL 719
RADHRHVVAHGLG+L
Sbjct: 46 RADHRHVVAHGLGHL 2
Score = 38.6 bits (78), Expect(2) = 1e-006
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = +1 / +1
Query: 727 QGHGPPRDGDQLVVQEA 777
Q HGPPRDGDQLV QEA
Sbjct: 10 QVHGPPRDGDQLVQQEA 60
Score = 38.2 bits (77), Expect(2) = 1e-006
Identities = 17/27 (62%), Positives = 18/27 (66%)
Frame = +1 / +1
Query: 1027 RQHRRDR*GASVLRRQGAHLPDRGGQD 1107
R+H RD G VLRRQGAHL D QD
Sbjct: 310 REHGRDGGGPQVLRRQGAHLADLCRQD 390
Score = 36.8 bits (74), Expect = 0.31
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = -3 / -2
Query: 776 ASWTTS*SPSRGGPWPW 726
AS TS*SPSRGGPW W
Sbjct: 59 ASCWTS*SPSRGGPWTW 9
>gb|CA019762.1|CA019762 HV13A16r HV Hordeum vulgare subsp. vulgare cDNA clone HV13A16
5-PRIME, mRNA sequence
Length = 501
Score = 192 bits (413), Expect = 5e-048
Identities = 86/138 (62%), Positives = 90/138 (65%)
Frame = -2 / -2
Query: 552 STTMVEANPPCVGRPSV*TSLYDQIFLLQYCSTLALQGLHSRQHXXXXXXXXXXXXPYLA 373
STTM EA PPCVG PSV*TSLYDQIFLLQYCST AL G SRQH YL
Sbjct: 500 STTMAEAKPPCVGLPSV*TSLYDQIFLLQYCSTFALHGRQSRQHPTITPTPTTSPTRYLL 321
Query: 372 XXXXXXXXXXXXXXXXTIGYFEAPRWFLAWWMSVWQIPQ*STFTTTSSGPVFLRV*E*GE 193
T+GY EAPR FL WWMSVWQ+PQ TF TTSSGPVFLRV *GE
Sbjct: 320 TSGPTSTTSPTTSCPGTMGYLEAPRSFLTWWMSVWQMPQYLTFNTTSSGPVFLRVYV*GE 141
Query: 192 RCPVASLAAHPTTFLSDA 139
R PVASLAAHP T +S+A
Sbjct: 140 RWPVASLAAHPVTVVSEA 87
Score = 133 bits (286), Expect(2) = 1e-058
Identities = 52/61 (85%), Positives = 54/61 (88%)
Frame = +2 / +1
Query: 140 ASERKVVGWAARDATGHLSPYSYTLRNTGPEDVVVKVLYCGICHTDIHQAKNHLGASKYP 319
ASE V GWAARDATGHLSPY+YTLR TGPEDVV+KV YCGICHTDIHQ KN LGASKYP
Sbjct: 88 ASETTVTGWAARDATGHLSPYTYTLRKTGPEDVVLKVKYCGICHTDIHQVKNDLGASKYP 267
Query: 320 M 322
M
Sbjct: 268 M 270
Score = 115 bits (245), Expect(2) = 8e-030
Identities = 48/67 (71%), Positives = 54/67 (80%)
Frame = -1 / -1
Query: 421 PNDHPDAYHVADAVLGHFGPDLHHLADHLVPRDHRIL*SPEVVLGLVDVRVADPAVEHLH 242
P+DHP A HVADAVL H PDLHHLA+HL+P DH IL S +VVL LVDVRVA+ AV +L
Sbjct: 369 PHDHPHADHVADAVLAHLRPDLHHLANHLMPWDHGILGSTQVVLDLVDVRVANAAVFNLQ 190
Query: 241 HHIFRAC 221
HHIFRAC
Sbjct: 189 HHIFRAC 169
Score = 114 bits (243), Expect(2) = 1e-058
Identities = 41/44 (93%), Positives = 42/44 (95%)
Frame = +2 / +1
Query: 422 CCRECSPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASTMVVD 553
CCR+C PCKANVEQYCNKKIWSYNDVYTDGRPTQGGFAS MVVD
Sbjct: 370 CCRDCRPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASAMVVD 501
Score = 72.5 bits (152), Expect(2) = 1e-026
Identities = 29/40 (72%), Positives = 33/40 (82%)
Frame = +1 / +3
Query: 214 QEHRP*RCGGEGALLRDLPHGHPPGQEPPRGFKVSYGPWA 333
QE+RP*RCG EG +LR LPHGHPPGQE P F+VS+GP A
Sbjct: 162 QENRP*RCGVEG*ILRHLPHGHPPGQERPGCFQVSHGPRA 281
Score = 68.0 bits (142), Expect(2) = 1e-026
Identities = 30/44 (68%), Positives = 35/44 (79%)
Frame = +1 / +3
Query: 421 VLPRVQPLQGQR*AVLQQEDLVIQRRLH*WTAHAGWIRLHHGRR 552
VLPR+ +QG+R AVLQQEDLV+QRRLH A AG +RL HGRR
Sbjct: 369 VLPRLPAVQGERRAVLQQEDLVVQRRLHRRQADAGRLRLRHGRR 500
Score = 58.8 bits (122), Expect(2) = 3e-011
Identities = 25/37 (67%), Positives = 26/37 (70%)
Frame = -3 / -3
Query: 332 AQGP*DTLKPRGGSWPGGCPCGRSRSRAPSPPHLQGL 222
A GP DT K G S PGGCPCG+ RS PS PHLQGL
Sbjct: 280 ALGPWDTWKHPGRS*PGGCPCGKCRSI*PSTPHLQGL 170
Score = 52.8 bits (109), Expect(2) = 1e-008
Identities = 22/48 (45%), Positives = 22/48 (45%)
Frame = +3 / +2
Query: 222 QALKMWW*XXXXXXXXXXXXXXXXXXXXLQSILWSLGTRWSARWWRSG 365
QALKMW * L SI WS G RW ARWWRSG
Sbjct: 170 QALKMWC*RLNTAAFATRTSTRSRTTWVLPSIPWSQGMRWLARWWRSG 313
Score = 36.3 bits (73), Expect(2) = 8e-030
Identities = 18/44 (40%), Positives = 21/44 (47%)
Frame = -3 / -3
Query: 551 RRPWWRRIHPAWAVHQXXXXXXXXXXXXXTAQRWPCRGCTRGST 420
RRPW RR PA A + TA+R PC +RGST
Sbjct: 499 RRPWRRRSRPASACRRCRRRCTTRSSCCSTARRSPCTAGSRGST 368
Score = 32.7 bits (65), Expect(2) = 3e-011
Identities = 10/16 (62%), Positives = 14/16 (87%)
Frame = -1 / -1
Query: 553 VDDHGGGESTLRGPSI 506
+DDHGGGE+ LR P++
Sbjct: 501 IDDHGGGEAALRRPAV 454
Score = 26.7 bits (52), Expect(2) = 1e-008
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = +3 / +2
Query: 474 RRSGHTTTSTLMDGPRR 524
RRSG TTTST G RR
Sbjct: 422 RRSGRTTTSTPTAGRRR 472
>gb|BM373958.2|BM373958 EBma03_SQ003_D14_R maternal, 8 DPA, no treatment, cv Optic, EBma03
Hordeum vulgare subsp. vulgare cDNA clone
EBma03_SQ003_D14 5', mRNA sequence
Length = 428
Score = 198 bits (426), Expect(3) = 4e-058
Identities = 76/82 (92%), Positives = 78/82 (95%)
Frame = +2 / +2
Query: 422 CCRECSPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASTMVVDQKFVVKIPAGLAPEQA 601
CCR+C PCKANVEQYCNKKIWS+NDVYTDGRPTQGGFAS MVVDQKFVVKIPAGLAPEQA
Sbjct: 131 CCRDCRPCKANVEQYCNKKIWSFNDVYTDGRPTQGGFASAMVVDQKFVVKIPAGLAPEQA 310
Query: 602 APLLCAGVTVYSPLKHFGLTNP 667
APLLCAGVTVYSPLKHFGL P
Sbjct: 311 APLLCAGVTVYSPLKHFGLMTP 376
Score = 181 bits (389), Expect = 1e-044
Identities = 80/125 (64%), Positives = 82/125 (65%)
Frame = -2 / -3
Query: 666 GFVSPKCFSGLYTVTPAHSSGAACSGARPAGIFTTNFWSTTMVEANPPCVGRPSV*TSLY 487
G +SPKCFSGLYTVTPAHSSGAACSGA PAGIFTTNF STTM EA PPCVG PSV*TSL
Sbjct: 375 GVISPKCFSGLYTVTPAHSSGAACSGASPAGIFTTNF*STTMAEAKPPCVGLPSV*TSLN 196
Query: 486 DQIFLLQYCSTLALQGLHSRQHXXXXXXXXXXXXPYLAXXXXXXXXXXXXXXXXTIGYFE 307
DQIFLLQYCST AL G SRQH YL T+GY E
Sbjct: 195 DQIFLLQYCSTFALHGRQSRQHPTITPTPTTSPTRYLLTSGPTSTTSPTTSCPGTMGYLE 16
Query: 306 APRWF 292
APR F
Sbjct: 15 APRSF 1
Score = 107 bits (228), Expect = 2e-022
Identities = 50/80 (62%), Positives = 55/80 (68%)
Frame = +1 / +1
Query: 421 VLPRVQPLQGQR*AVLQQEDLVIQRRLH*WTAHAGWIRLHHGRRPEVCGEDPXXXXXXXX 600
VLPR+ +QG+R AVLQQEDLV+QRRLH A AG +RL HGRR EV GEDP
Sbjct: 130 VLPRLPAVQGERRAVLQQEDLVVQRRLHRRQADAGRLRLRHGRRSEVRGEDPRRACAGAG 309
Query: 601 XXXXVRWRDGVQPAEALWAD 660
VR RDGVQPAEAL AD
Sbjct: 310 GAAAVRGRDGVQPAEALRAD 369
Score = 74.8 bits (157), Expect(2) = 1e-025
Identities = 30/43 (69%), Positives = 34/43 (79%)
Frame = -1 / -2
Query: 421 PNDHPDAYHVADAVLGHFGPDLHHLADHLVPRDHRIL*SPEVV 293
P+DHP A HVADAVL H PDLHHLA+HL+P DH IL S +VV
Sbjct: 130 PHDHPHADHVADAVLAHLRPDLHHLANHLMPWDHGILGSTQVV 2
Score = 62.9 bits (131), Expect(2) = 1e-025
Identities = 31/72 (43%), Positives = 35/72 (48%)
Frame = -3 / -1
Query: 635 CTPSRQRTXXXXXXXXXXXPGSSPQTSGRRPWWRRIHPAWAVHQXXXXXXXXXXXXXTAQ 456
CTPSR RT GSSP+TS RRPW RR PA A + TA+
Sbjct: 344 CTPSRPRTAAAPPAPAQARRGSSPRTSDRRPWRRRSRPASACRRCRRR*TTRSSCCSTAR 165
Query: 455 RWPCRGCTRGST 420
R PC +RGST
Sbjct: 164 RSPCTAGSRGST 129
Score = 48.7 bits (100), Expect(2) = 4e-005
Identities = 16/23 (69%), Positives = 21/23 (91%)
Frame = -1 / -2
Query: 574 DLHHKLLVDDHGGGESTLRGPSI 506
DLHH+LL+DDHGGGE+ LR P++
Sbjct: 283 DLHHELLIDDHGGGEAALRRPAV 215
Score = 42.3 bits (86), Expect(3) = 4e-058
Identities = 15/20 (75%), Positives = 15/20 (75%)
Frame = +3 / +3
Query: 306 LQSILWSLGTRWSARWWRSG 365
L SI WS G RW ARWWRSG
Sbjct: 15 LPSIPWSQGMRWLARWWRSG 74
Score = 24.4 bits (47), Expect(3) = 4e-058
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +2 / +2
Query: 293 NHLGASKYPM 322
N LGASKYPM
Sbjct: 2 NDLGASKYPM 31
Score = 21.7 bits (41), Expect(2) = 4e-005
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -1 / -2
Query: 298 VVLGLVDVRVADPAVEHLHH 239
+V L+DVR+A PAV H
Sbjct: 184 LVAVLLDVRLARPAVAAAPH 125
>gb|CB858813.1|CB858813 HI08G13w HI Hordeum vulgare subsp. vulgare cDNA clone HI08G13
3-PRIME, mRNA sequence
Length = 579
Score = 221 bits (477), Expect = 8e-057
Identities = 98/140 (70%), Positives = 103/140 (73%)
Frame = +2 / -3
Query: 773 KRAEAMDHLGADAYLVXXXXXXXXXXXXXXXYIIDTVPVHHPLEPYXXXXXXXXXXXXXX 952
KRAEA+D LGAD YLV YIIDTVPV HPLEPY
Sbjct: 577 KRAEAVDDLGADEYLVSSDADQMAAAADSLDYIIDTVPVKHPLEPYLALLKMDGKLVLMG 398
Query: 953 XIGEPLSFVSPMVMLGRKAITGSFIGSIDETAEVLQFCVDKGLTSQIEVVKMGYVNEALE 1132
I EPLSFVSPMVMLGRK ITGSFIGS+DET EVL+FCVDKGLTSQIEVVKM YVN+ALE
Sbjct: 397 VIAEPLSFVSPMVMLGRKTITGSFIGSMDETEEVLKFCVDKGLTSQIEVVKMDYVNQALE 218
Query: 1133 RLERNDVRYRFVVDVAGSNV 1192
RLERNDVRYRFVVDVAGSN+
Sbjct: 217 RLERNDVRYRFVVDVAGSNL 158
Score = 116 bits (248), Expect = 3e-025
Identities = 61/112 (54%), Positives = 64/112 (57%)
Frame = -2 / +3
Query: 1107 ILTTSIWEVSPLSTQN*STSAVSSMLPMKLPVMAFRPSITMGDTKLRGXXXXXXXXXXXX 928
ILTTSI EVSPLSTQN TS+VSSMLPMKLPVM F PSIT+GDTKL G
Sbjct: 243 ILTTSICEVSPLSTQNLRTSSVSSMLPMKLPVMVFLPSITIGDTKLSGSAITPISTSLPS 422
Query: 927 XXXXXXXXXSGWCTGTVXXXXXXXXXXXXXXXXXELTRYASAPRWSIASARF 772
SG TGTV ELTRY+SAPR S ASARF
Sbjct: 423 ILSSAR*GSSGCFTGTVSMM*SSESAAAAIWSASELTRYSSAPRSSTASARF 578
Score = 95.5 bits (202), Expect = 7e-019
Identities = 43/70 (61%), Positives = 47/70 (67%)
Frame = -1 / +2
Query: 1141 LQPLQRXXXXXXXXXXXLGGEPLVDAELKHLSGLVDAADEAPRDGLPPQHHHGRHEAQGL 962
L+PL+R L GEPLVDAEL+ L LV A DEAPRDGLPPQHHH HEA+ L
Sbjct: 209 LEPLERLVDVVHLDDLDLRGEPLVDAELEDLLRLVHAPDEAPRDGLPPQHHHWGHEAERL 388
Query: 961 ADDAQQHELA 932
D A QHELA
Sbjct: 389 RDHAHQHELA 418
Score = 45.5 bits (93), Expect = 8e-004
Identities = 19/27 (70%), Positives = 20/27 (74%)
Frame = +1 / -2
Query: 1027 RQHRRDR*GASVLRRQGAHLPDRGGQD 1107
R+H RD G VLRRQGAHL DRG QD
Sbjct: 323 REHGRDGGGPQVLRRQGAHLADRGRQD 243
>gb|BI957159.1|BI957159 HVSMEn0007N14f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0007N14f, mRNA sequence
Length = 849
Score = 171 bits (369), Expect = 6e-042
Identities = 84/149 (56%), Positives = 90/149 (60%)
Frame = -2 / -2
Query: 585 RPAGIFTTNFWSTTMVEANPPCVGRPSV*TSLYDQIFLLQYCSTLALQGLHSRQHXXXXX 406
R GI +F S TMV A PP VG SV*TSLY QI +LQY ST AL GL SRQH
Sbjct: 509 RTEGILN*HF*SKTMV*AXPP*VGLLSV*TSLYAQILVLQYWSTFALHGLQSRQHPAITP 330
Query: 405 XXXXXXXPYLAXXXXXXXXXXXXXXXXTIGYFEAPRWFLAWWMSVWQIPQ*STFTTTSSG 226
YL T+GY EAPR FL WWMSVWQ+PQ TF TTSSG
Sbjct: 329 TPTTSPTRYLVTSGPTSTTSPTTSCPGTMGYLEAPRSFLTWWMSVWQMPQYLTFNTTSSG 150
Query: 225 PVFLRV*E*GERCPVASLAAHPTTFLSDA 139
PVFLRV *GER PVASLAAHP T +S+A
Sbjct: 149 PVFLRVYV*GERWPVASLAAHPVTVVSEA 63
Score = 133 bits (286), Expect(2) = 2e-055
Identities = 52/61 (85%), Positives = 54/61 (88%)
Frame = +2 / +1
Query: 140 ASERKVVGWAARDATGHLSPYSYTLRNTGPEDVVVKVLYCGICHTDIHQAKNHLGASKYP 319
ASE V GWAARDATGHLSPY+YTLR TGPEDVV+KV YCGICHTDIHQ KN LGASKYP
Sbjct: 64 ASETTVTGWAARDATGHLSPYTYTLRKTGPEDVVLKVKYCGICHTDIHQVKNDLGASKYP 243
Query: 320 M 322
M
Sbjct: 244 M 246
Score = 115 bits (246), Expect = 6e-025
Identities = 48/67 (71%), Positives = 53/67 (79%)
Frame = -1 / -1
Query: 421 PNDHPDAYHVADAVLGHFGPDLHHLADHLVPRDHRIL*SPEVVLGLVDVRVADPAVEHLH 242
P DHP A HVADAVLGH PD HHLA+HL+P DH IL S +VVL LVDVRVA+ AV +L
Sbjct: 345 PRDHPHADHVADAVLGHLRPDFHHLANHLMPWDHGILGSTQVVLDLVDVRVANAAVFNLQ 166
Query: 241 HHIFRAC 221
HHIFRAC
Sbjct: 165 HHIFRAC 145
Score = 103 bits (220), Expect(2) = 2e-055
Identities = 38/55 (69%), Positives = 44/55 (80%)
Frame = +2 / +1
Query: 422 CCRECSPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASTMVVDQKFVVKIPAGL 586
CCR+C PCKANV+QYC+ KIW+YNDVYTD +PT GG A TMV DQK KIP+ L
Sbjct: 346 CCRDCRPCKANVDQYCSTKIWAYNDVYTDSKPTHGGXAYTMVFDQKC*FKIPSVL 510
Score = 72.5 bits (152), Expect(2) = 2e-022
Identities = 29/40 (72%), Positives = 33/40 (82%)
Frame = +1 / +3
Query: 214 QEHRP*RCGGEGALLRDLPHGHPPGQEPPRGFKVSYGPWA 333
QE+RP*RCG EG +LR LPHGHPPGQE P F+VS+GP A
Sbjct: 138 QENRP*RCGVEG*ILRHLPHGHPPGQERPGCFQVSHGPRA 257
Score = 58.8 bits (122), Expect = 8e-008
Identities = 25/37 (67%), Positives = 26/37 (70%)
Frame = -3 / -3
Query: 332 AQGP*DTLKPRGGSWPGGCPCGRSRSRAPSPPHLQGL 222
A GP DT K G S PGGCPCG+ RS PS PHLQGL
Sbjct: 256 ALGPWDTWKHPGRS*PGGCPCGKCRSI*PSTPHLQGL 146
Score = 53.8 bits (111), Expect(2) = 2e-022
Identities = 25/47 (53%), Positives = 32/47 (68%)
Frame = +1 / +3
Query: 421 VLPRVQPLQGQR*AVLQQEDLVIQRRLH*WTAHAGWIRLHHGRRPEV 561
VLPR+Q +Q +R VLQ +DL +QRRLH A++ RLHHG EV
Sbjct: 345 VLPRLQAVQSERRPVLQHQDLGVQRRLHRQQANSWRXRLHHGL*SEV 485
Score = 51.5 bits (106), Expect = 1e-005
Identities = 21/48 (43%), Positives = 22/48 (45%)
Frame = +3 / +2
Query: 222 QALKMWW*XXXXXXXXXXXXXXXXXXXXLQSILWSLGTRWSARWWRSG 365
QALKMW * L SI WS G RW ARWW+SG
Sbjct: 146 QALKMWC*RLNTAAFATRTSTRSRTTWVLPSIPWSQGMRWLARWWKSG 289
>gb|BQ468460.1|BQ468460 HM01F04T HM Hordeum vulgare subsp. vulgare cDNA clone HM01F04
5-PRIME, mRNA sequence
Length = 469
Score = 181 bits (389), Expect = 1e-044
Identities = 81/132 (61%), Positives = 85/132 (64%)
Frame = -2 / -3
Query: 534 ANPPCVGRPSV*TSLYDQIFLLQYCSTLALQGLHSRQHXXXXXXXXXXXXPYLAXXXXXX 355
A PPCVG PSV*TSLYDQIFLLQYCST AL G SRQH YL
Sbjct: 467 AKPPCVGLPSV*TSLYDQIFLLQYCSTFALHGRQSRQHPTITPTPTTSPTRYLLTSGPTS 288
Query: 354 XXXXXXXXXXTIGYFEAPRWFLAWWMSVWQIPQ*STFTTTSSGPVFLRV*E*GERCPVAS 175
T+GY EAPR FL WWMSVWQ+PQ TF TTSSGPVFLRV *GER PVAS
Sbjct: 287 TTSPTTSCPGTMGYLEAPRSFLTWWMSVWQMPQYLTFNTTSSGPVFLRVYV*GERWPVAS 108
Query: 174 LAAHPTTFLSDA 139
LAAHP T +S+A
Sbjct: 107 LAAHPVTVVSEA 72
Score = 133 bits (286), Expect(2) = 2e-055
Identities = 52/61 (85%), Positives = 54/61 (88%)
Frame = +2 / +1
Query: 140 ASERKVVGWAARDATGHLSPYSYTLRNTGPEDVVVKVLYCGICHTDIHQAKNHLGASKYP 319
ASE V GWAARDATGHLSPY+YTLR TGPEDVV+KV YCGICHTDIHQ KN LGASKYP
Sbjct: 73 ASETTVTGWAARDATGHLSPYTYTLRKTGPEDVVLKVKYCGICHTDIHQVKNDLGASKYP 252
Query: 320 M 322
M
Sbjct: 253 M 255
Score = 115 bits (245), Expect(2) = 2e-026
Identities = 48/67 (71%), Positives = 54/67 (80%)
Frame = -1 / -2
Query: 421 PNDHPDAYHVADAVLGHFGPDLHHLADHLVPRDHRIL*SPEVVLGLVDVRVADPAVEHLH 242
P+DHP A HVADAVL H PDLHHLA+HL+P DH IL S +VVL LVDVRVA+ AV +L
Sbjct: 354 PHDHPHADHVADAVLAHLRPDLHHLANHLMPWDHGILGSTQVVLDLVDVRVANAAVFNLQ 175
Query: 241 HHIFRAC 221
HHIFRAC
Sbjct: 174 HHIFRAC 154
Score = 103 bits (220), Expect(2) = 2e-055
Identities = 36/38 (94%), Positives = 37/38 (97%)
Frame = +2 / +1
Query: 422 CCRECSPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFA 535
CCR+C PCKANVEQYCNKKIWSYNDVYTDGRPTQGGFA
Sbjct: 355 CCRDCRPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFA 468
Score = 72.5 bits (152), Expect(2) = 1e-022
Identities = 29/40 (72%), Positives = 33/40 (82%)
Frame = +1 / +3
Query: 214 QEHRP*RCGGEGALLRDLPHGHPPGQEPPRGFKVSYGPWA 333
QE+RP*RCG EG +LR LPHGHPPGQE P F+VS+GP A
Sbjct: 147 QENRP*RCGVEG*ILRHLPHGHPPGQERPGCFQVSHGPRA 266
Score = 58.8 bits (122), Expect = 8e-008
Identities = 25/37 (67%), Positives = 26/37 (70%)
Frame = -3 / -1
Query: 332 AQGP*DTLKPRGGSWPGGCPCGRSRSRAPSPPHLQGL 222
A GP DT K G S PGGCPCG+ RS PS PHLQGL
Sbjct: 265 ALGPWDTWKHPGRS*PGGCPCGKCRSI*PSTPHLQGL 155
Score = 55.1 bits (114), Expect(2) = 1e-022
Identities = 25/38 (65%), Positives = 30/38 (78%)
Frame = +1 / +3
Query: 421 VLPRVQPLQGQR*AVLQQEDLVIQRRLH*WTAHAGWIR 534
VLPR+ +QG+R AVLQQEDLV+QRRLH A AG +R
Sbjct: 354 VLPRLPAVQGERRAVLQQEDLVVQRRLHRRQADAGRLR 467
Score = 52.8 bits (109), Expect(2) = 1e-008
Identities = 22/48 (45%), Positives = 22/48 (45%)
Frame = +3 / +2
Query: 222 QALKMWW*XXXXXXXXXXXXXXXXXXXXLQSILWSLGTRWSARWWRSG 365
QALKMW * L SI WS G RW ARWWRSG
Sbjct: 155 QALKMWC*RLNTAAFATRTSTRSRTTWVLPSIPWSQGMRWLARWWRSG 298
Score = 26.7 bits (52), Expect(2) = 1e-008
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = +3 / +2
Query: 474 RRSGHTTTSTLMDGPRR 524
RRSG TTTST G RR
Sbjct: 407 RRSGRTTTSTPTAGRRR 457
Score = 24.9 bits (48), Expect(2) = 2e-026
Identities = 14/39 (35%), Positives = 17/39 (43%)
Frame = -3 / -1
Query: 536 RRIHPAWAVHQXXXXXXXXXXXXXTAQRWPCRGCTRGST 420
RR PA A + TA+R PC +RGST
Sbjct: 469 RRSRPASACRRCRRRCTTRSSCCSTARRSPCTAGSRGST 353
>emb|X92754.1|HVCADMRNA H.vulgare mRNA for cinnamyl alcohol dehydrogenase
Length = 458
Score = 210 bits (454), Expect = 1e-053
Identities = 91/146 (62%), Positives = 103/146 (70%)
Frame = +2 / +1
Query: 725 AKAMGHHVTVISSSSKKRAEAMDHLGADAYLVXXXXXXXXXXXXXXXYIIDTVPVHHPLE 904
AKAMGHHVTVISSS KKR EA++HLGAD YLV YIIDTVPV HPLE
Sbjct: 19 AKAMGHHVTVISSSDKKRQEALEHLGADDYLVSSDSTRMQEVADSLDYIIDTVPVFHPLE 198
Query: 905 PYXXXXXXXXXXXXXXXIGEPLSFVSPMVMLGRKAITGSFIGSIDETAEVLQFCVDKGLT 1084
PY I PL F++P+VMLGRK ITGSF+GSI ET E+L+FC +KGL+
Sbjct: 199 PYLSLLRLDGKLILMGVINTPLQFLTPVVMLGRKTITGSFVGSIKETEEMLEFCKEKGLS 378
Query: 1085 SQIEVVKMGYVNEALERLERNDVRYR 1162
S IEVVKM YVN+ALERLE+NDVRYR
Sbjct: 379 SMIEVVKMDYVNKALERLEKNDVRYR 456
Score = 61.6 bits (128), Expect(2) = 3e-017
Identities = 29/48 (60%), Positives = 32/48 (66%)
Frame = -2 / -1
Query: 1107 ILTTSIWEVSPLSTQN*STSAVSSMLPMKLPVMAFRPSITMGDTKLRG 964
I TTSI E+ P S QN S S+VS MLP KLPV+ F PSIT G RG
Sbjct: 401 IFTTSIMELRPFSLQNSSISSVSFMLPTKLPVIVFLPSITTGVRNCRG 258
Score = 47.3 bits (97), Expect(2) = 3e-017
Identities = 27/57 (47%), Positives = 30/57 (52%)
Frame = -2 / -1
Query: 888 TGTVXXXXXXXXXXXXXXXXXELTRYASAPRWSIASARFLDDELITVTWWPMALATF 718
TGTV ELTR +SAPR S AS FL +EL+TVT PMA A F
Sbjct: 182 TGTVSMI*SSESATSCIRVESELTR*SSAPRCSKASCLFLSEELMTVT*CPMAFAIF 12
Score = 46.4 bits (95), Expect(2) = 1e-004
Identities = 25/70 (35%), Positives = 34/70 (48%)
Frame = -1 / -3
Query: 1141 LQPLQRXXXXXXXXXXXLGGEPLVDAELKHLSGLVDAADEAPRDGLPPQHHHGRHEAQGL 962
LQP + G E L+ AELKHL + A EAP D L P+H+ G + Q
Sbjct: 435 LQPFKGFVNVIHLHNFNHGAEALLFAELKHLLCFLYAPYEAPCDCLSPKHNDGGEKLQRS 256
Query: 961 ADDAQQHELA 932
D+ Q +L+
Sbjct: 255 IDNTHQDQLS 226
Score = 22.1 bits (42), Expect(2) = 1e-004
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -1 / -3
Query: 784 LRALLGRRADHRHVVAHG 731
L +LL RRA HV+ HG
Sbjct: 78 LLSLLIRRAYDSHVMPHG 25
>gb|BU995486.1|BU995486 HM10G11r HM Hordeum vulgare subsp. vulgare cDNA clone HM10G11
5-PRIME, mRNA sequence
Length = 439
Score = 179 bits (385), Expect = 4e-044
Identities = 80/130 (61%), Positives = 84/130 (64%)
Frame = -2 / -1
Query: 528 PPCVGRPSV*TSLYDQIFLLQYCSTLALQGLHSRQHXXXXXXXXXXXXPYLAXXXXXXXX 349
PPCVG PSV*TSLYDQIFLLQYCST AL G SRQH YL
Sbjct: 439 PPCVGLPSV*TSLYDQIFLLQYCSTFALHGRQSRQHPTITPTPTTSPTRYLLTSGPTSTT 260
Query: 348 XXXXXXXXTIGYFEAPRWFLAWWMSVWQIPQ*STFTTTSSGPVFLRV*E*GERCPVASLA 169
T+GY EAPR FL WWMSVWQ+PQ TF TTSSGPVFLRV *GER PVASLA
Sbjct: 259 SPTTSCPGTMGYLEAPRSFLTWWMSVWQMPQYLTFNTTSSGPVFLRVYV*GERWPVASLA 80
Query: 168 AHPTTFLSDA 139
AHP T +S+A
Sbjct: 79 AHPVTVVSEA 50
Score = 133 bits (286), Expect(2) = 2e-053
Identities = 52/61 (85%), Positives = 54/61 (88%)
Frame = +2 / +3
Query: 140 ASERKVVGWAARDATGHLSPYSYTLRNTGPEDVVVKVLYCGICHTDIHQAKNHLGASKYP 319
ASE V GWAARDATGHLSPY+YTLR TGPEDVV+KV YCGICHTDIHQ KN LGASKYP
Sbjct: 51 ASETTVTGWAARDATGHLSPYTYTLRKTGPEDVVLKVKYCGICHTDIHQVKNDLGASKYP 230
Query: 320 M 322
M
Sbjct: 231 M 233
Score = 115 bits (245), Expect = 8e-025
Identities = 48/67 (71%), Positives = 54/67 (80%)
Frame = -1 / -3
Query: 421 PNDHPDAYHVADAVLGHFGPDLHHLADHLVPRDHRIL*SPEVVLGLVDVRVADPAVEHLH 242
P+DHP A HVADAVL H PDLHHLA+HL+P DH IL S +VVL LVDVRVA+ AV +L
Sbjct: 332 PHDHPHADHVADAVLAHLRPDLHHLANHLMPWDHGILGSTQVVLDLVDVRVANAAVFNLQ 153
Query: 241 HHIFRAC 221
HHIFRAC
Sbjct: 152 HHIFRAC 132
Score = 96.4 bits (204), Expect(2) = 2e-053
Identities = 33/35 (94%), Positives = 34/35 (97%)
Frame = +2 / +3
Query: 422 CCRECSPCKANVEQYCNKKIWSYNDVYTDGRPTQG 526
CCR+C PCKANVEQYCNKKIWSYNDVYTDGRPTQG
Sbjct: 333 CCRDCRPCKANVEQYCNKKIWSYNDVYTDGRPTQG 437
Score = 72.5 bits (152), Expect(2) = 3e-022
Identities = 29/40 (72%), Positives = 33/40 (82%)
Frame = +1 / +2
Query: 214 QEHRP*RCGGEGALLRDLPHGHPPGQEPPRGFKVSYGPWA 333
QE+RP*RCG EG +LR LPHGHPPGQE P F+VS+GP A
Sbjct: 125 QENRP*RCGVEG*ILRHLPHGHPPGQERPGCFQVSHGPRA 244
Score = 58.8 bits (122), Expect = 8e-008
Identities = 25/37 (67%), Positives = 26/37 (70%)
Frame = -3 / -2
Query: 332 AQGP*DTLKPRGGSWPGGCPCGRSRSRAPSPPHLQGL 222
A GP DT K G S PGGCPCG+ RS PS PHLQGL
Sbjct: 243 ALGPWDTWKHPGRS*PGGCPCGKCRSI*PSTPHLQGL 133
Score = 53.3 bits (110), Expect(2) = 3e-022
Identities = 24/35 (68%), Positives = 28/35 (80%)
Frame = +1 / +2
Query: 421 VLPRVQPLQGQR*AVLQQEDLVIQRRLH*WTAHAG 525
VLPR+ +QG+R AVLQQEDLV+QRRLH A AG
Sbjct: 332 VLPRLPAVQGERRAVLQQEDLVVQRRLHRRQADAG 436
Score = 52.8 bits (109), Expect(2) = 1e-008
Identities = 22/48 (45%), Positives = 22/48 (45%)
Frame = +3 / +1
Query: 222 QALKMWW*XXXXXXXXXXXXXXXXXXXXLQSILWSLGTRWSARWWRSG 365
QALKMW * L SI WS G RW ARWWRSG
Sbjct: 133 QALKMWC*RLNTAAFATRTSTRSRTTWVLPSIPWSQGMRWLARWWRSG 276
Score = 26.7 bits (52), Expect(2) = 1e-008
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = +3 / +1
Query: 474 RRSGHTTTSTLMDGPRR 524
RRSG TTTST G RR
Sbjct: 385 RRSGRTTTSTPTAGRRR 435
>gb|BU997581.1|BU997581 HI08G13r HI Hordeum vulgare subsp. vulgare cDNA clone HI08G13
5-PRIME, mRNA sequence
Length = 529
Score = 168 bits (362), Expect = 6e-041
Identities = 77/127 (60%), Positives = 81/127 (63%)
Frame = -2 / -2
Query: 519 VGRPSV*TSLYDQIFLLQYCSTLALQGLHSRQHXXXXXXXXXXXXPYLAXXXXXXXXXXX 340
VG PSV*TSLYDQIFLLQYCST AL G SRQH YL
Sbjct: 528 VGLPSV*TSLYDQIFLLQYCSTFALHGRQSRQHPTITPTPTTSPTRYLLTSGPTSTTSPT 349
Query: 339 XXXXXTIGYFEAPRWFLAWWMSVWQIPQ*STFTTTSSGPVFLRV*E*GERCPVASLAAHP 160
T+GY EAPR FL WWMSVWQ+PQ TF TTSSGPVFLRV *GER PVASLAAHP
Sbjct: 348 TSCPGTMGYLEAPRSFLTWWMSVWQMPQYLTFNTTSSGPVFLRVYV*GERWPVASLAAHP 169
Query: 159 TTFLSDA 139
T +S+A
Sbjct: 168 VTVVSEA 148
Score = 133 bits (286), Expect(2) = 8e-052
Identities = 52/61 (85%), Positives = 54/61 (88%)
Frame = +2 / +2
Query: 140 ASERKVVGWAARDATGHLSPYSYTLRNTGPEDVVVKVLYCGICHTDIHQAKNHLGASKYP 319
ASE V GWAARDATGHLSPY+YTLR TGPEDVV+KV YCGICHTDIHQ KN LGASKYP
Sbjct: 149 ASETTVTGWAARDATGHLSPYTYTLRKTGPEDVVLKVKYCGICHTDIHQVKNDLGASKYP 328
Query: 320 M 322
M
Sbjct: 329 M 331
Score = 115 bits (245), Expect = 8e-025
Identities = 48/67 (71%), Positives = 54/67 (80%)
Frame = -1 / -1
Query: 421 PNDHPDAYHVADAVLGHFGPDLHHLADHLVPRDHRIL*SPEVVLGLVDVRVADPAVEHLH 242
P+DHP A HVADAVL H PDLHHLA+HL+P DH IL S +VVL LVDVRVA+ AV +L
Sbjct: 430 PHDHPHADHVADAVLAHLRPDLHHLANHLMPWDHGILGSTQVVLDLVDVRVANAAVFNLQ 251
Query: 241 HHIFRAC 221
HHIFRAC
Sbjct: 250 HHIFRAC 230
Score = 91.3 bits (193), Expect(2) = 8e-052
Identities = 31/33 (93%), Positives = 32/33 (96%)
Frame = +2 / +2
Query: 422 CCRECSPCKANVEQYCNKKIWSYNDVYTDGRPT 520
CCR+C PCKANVEQYCNKKIWSYNDVYTDGRPT
Sbjct: 431 CCRDCRPCKANVEQYCNKKIWSYNDVYTDGRPT 529
Score = 72.5 bits (152), Expect(2) = 2e-021
Identities = 29/40 (72%), Positives = 33/40 (82%)
Frame = +1 / +1
Query: 214 QEHRP*RCGGEGALLRDLPHGHPPGQEPPRGFKVSYGPWA 333
QE+RP*RCG EG +LR LPHGHPPGQE P F+VS+GP A
Sbjct: 223 QENRP*RCGVEG*ILRHLPHGHPPGQERPGCFQVSHGPRA 342
Score = 58.8 bits (122), Expect = 8e-008
Identities = 25/37 (67%), Positives = 26/37 (70%)
Frame = -3 / -3
Query: 332 AQGP*DTLKPRGGSWPGGCPCGRSRSRAPSPPHLQGL 222
A GP DT K G S PGGCPCG+ RS PS PHLQGL
Sbjct: 341 ALGPWDTWKHPGRS*PGGCPCGKCRSI*PSTPHLQGL 231
Score = 52.8 bits (109), Expect(2) = 2e-007
Identities = 22/48 (45%), Positives = 22/48 (45%)
Frame = +3 / +3
Query: 222 QALKMWW*XXXXXXXXXXXXXXXXXXXXLQSILWSLGTRWSARWWRSG 365
QALKMW * L SI WS G RW ARWWRSG
Sbjct: 231 QALKMWC*RLNTAAFATRTSTRSRTTWVLPSIPWSQGMRWLARWWRSG 374
Score = 51.0 bits (105), Expect(2) = 2e-021
Identities = 21/28 (75%), Positives = 25/28 (89%)
Frame = +1 / +1
Query: 421 VLPRVQPLQGQR*AVLQQEDLVIQRRLH 504
VLPR+ +QG+R AVLQQEDLV+QRRLH
Sbjct: 430 VLPRLPAVQGERRAVLQQEDLVVQRRLH 513
Score = 23.1 bits (44), Expect(2) = 2e-007
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +3 / +3
Query: 474 RRSGHTTTST 503
RRSG TTTST
Sbjct: 483 RRSGRTTTST 512
>gb|CB881629.1|CB881629 HM10G11w HM Hordeum vulgare subsp. vulgare cDNA clone HM10G11
3-PRIME, mRNA sequence
Length = 524
Score = 203 bits (438), Expect = 2e-051
Identities = 90/130 (69%), Positives = 94/130 (72%)
Frame = +2 / -1
Query: 803 ADAYLVXXXXXXXXXXXXXXXYIIDTVPVHHPLEPYXXXXXXXXXXXXXXXIGEPLSFVS 982
AD YLV YIIDTVPV HPLEPY I EPLSFVS
Sbjct: 524 ADEYLVSSDADQMAAAADSLDYIIDTVPVKHPLEPYLALLKMDGKLVLMGVIAEPLSFVS 345
Query: 983 PMVMLGRKAITGSFIGSIDETAEVLQFCVDKGLTSQIEVVKMGYVNEALERLERNDVRYR 1162
PMVMLGRK ITGSFIGS+DET EVL+FCVDKGLTSQIEVVKM YVN+ALERLERNDVRYR
Sbjct: 344 PMVMLGRKTITGSFIGSMDETEEVLKFCVDKGLTSQIEVVKMDYVNQALERLERNDVRYR 165
Query: 1163 FVVDVAGSNV 1192
FVVDVAGSN+
Sbjct: 164 FVVDVAGSNL 135
Score = 98.7 bits (209), Expect = 7e-020
Identities = 52/101 (51%), Positives = 55/101 (54%)
Frame = -2 / +1
Query: 1107 ILTTSIWEVSPLSTQN*STSAVSSMLPMKLPVMAFRPSITMGDTKLRGXXXXXXXXXXXX 928
ILTTSI EVSPLSTQN TS+VSSMLPMKLPVM F PSIT+GDTKL G
Sbjct: 220 ILTTSICEVSPLSTQNLRTSSVSSMLPMKLPVMVFLPSITIGDTKLSGSAITPISTSLPS 399
Query: 927 XXXXXXXXXSGWCTGTVXXXXXXXXXXXXXXXXXELTRYAS 805
SG TGTV ELTRY+S
Sbjct: 400 ILSSAR*GSSGCFTGTVSMM*SSESAAAAIWSASELTRYSS 522
Score = 95.5 bits (202), Expect = 7e-019
Identities = 43/70 (61%), Positives = 47/70 (67%)
Frame = -1 / +3
Query: 1141 LQPLQRXXXXXXXXXXXLGGEPLVDAELKHLSGLVDAADEAPRDGLPPQHHHGRHEAQGL 962
L+PL+R L GEPLVDAEL+ L LV A DEAPRDGLPPQHHH HEA+ L
Sbjct: 186 LEPLERLVDVVHLDDLDLRGEPLVDAELEDLLRLVHAPDEAPRDGLPPQHHHWGHEAERL 365
Query: 961 ADDAQQHELA 932
D A QHELA
Sbjct: 366 RDHAHQHELA 395
Score = 45.5 bits (93), Expect = 8e-004
Identities = 19/27 (70%), Positives = 20/27 (74%)
Frame = +1 / -3
Query: 1027 RQHRRDR*GASVLRRQGAHLPDRGGQD 1107
R+H RD G VLRRQGAHL DRG QD
Sbjct: 300 REHGRDGGGPQVLRRQGAHLADRGRQD 220
>gb|BQ661428.1|BQ661428 HM03H06u HM Hordeum vulgare subsp. vulgare cDNA clone HM03H06
3-PRIME, mRNA sequence
Length = 486
Score = 195 bits (421), Expect = 4e-049
Identities = 85/109 (77%), Positives = 89/109 (81%)
Frame = +2 / -2
Query: 866 YIIDTVPVHHPLEPYXXXXXXXXXXXXXXXIGEPLSFVSPMVMLGRKAITGSFIGSIDET 1045
YIIDTVPV HPLEPY I EPLSFVSPMVMLGRK ITGSFIGS+DET
Sbjct: 440 YIIDTVPVKHPLEPYLALLKMDGKLVLMGVIAEPLSFVSPMVMLGRKTITGSFIGSMDET 261
Query: 1046 AEVLQFCVDKGLTSQIEVVKMGYVNEALERLERNDVRYRFVVDVAGSNV 1192
EVL+FCVDKGLTSQIEVVKM YVN+ALERLERNDVRYRFVVDVAGSN+
Sbjct: 260 EEVLKFCVDKGLTSQIEVVKMDYVNQALERLERNDVRYRFVVDVAGSNL 114
Score = 95.5 bits (202), Expect = 7e-019
Identities = 43/70 (61%), Positives = 47/70 (67%)
Frame = -1 / +3
Query: 1141 LQPLQRXXXXXXXXXXXLGGEPLVDAELKHLSGLVDAADEAPRDGLPPQHHHGRHEAQGL 962
L+PL+R L GEPLVDAEL+ L LV A DEAPRDGLPPQHHH HEA+ L
Sbjct: 165 LEPLERLVDVVHLDDLDLRGEPLVDAELEDLLRLVHAPDEAPRDGLPPQHHHWGHEAERL 344
Query: 961 ADDAQQHELA 932
D A QHELA
Sbjct: 345 RDHAHQHELA 374
Score = 91.8 bits (194), Expect = 9e-018
Identities = 46/77 (59%), Positives = 48/77 (62%)
Frame = -2 / +1
Query: 1107 ILTTSIWEVSPLSTQN*STSAVSSMLPMKLPVMAFRPSITMGDTKLRGXXXXXXXXXXXX 928
ILTTSI EVSPLSTQN TS+VSSMLPMKLPVM F PSIT+GDTKL G
Sbjct: 199 ILTTSICEVSPLSTQNLRTSSVSSMLPMKLPVMVFLPSITIGDTKLSGSAITPISTSLPS 378
Query: 927 XXXXXXXXXSGWCTGTV 877
SG TGTV
Sbjct: 379 ILSSAR*GSSGCFTGTV 429
Score = 45.5 bits (93), Expect = 8e-004
Identities = 19/27 (70%), Positives = 20/27 (74%)
Frame = +1 / -1
Query: 1027 RQHRRDR*GASVLRRQGAHLPDRGGQD 1107
R+H RD G VLRRQGAHL DRG QD
Sbjct: 279 REHGRDGGGPQVLRRQGAHLADRGRQD 199
>gb|BF623534.2|BF623534 HVSMEa0002J16f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0002J16f, mRNA sequence
Length = 834
Score = 101 bits (216), Expect(3) = 7e-048
Identities = 39/81 (48%), Positives = 52/81 (64%)
Frame = +2 / +2
Query: 425 CRECSPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASTMVVDQKFVVKIPAGLAPEQAA 604
CR C C E YC+ + + N V DG TQGGF+ +VV+Q +V+++P L+ AA
Sbjct: 353 CRSCGTCSKGYENYCSTLVLTSNGVDYDGATTQGGFSDVLVVNQDYVLRVPESLSLAGAA 532
Query: 605 PLLCAGVTVYSPLKHFGLTNP 667
PLLCAGVTVYSP+ +GL P
Sbjct: 533 PLLCAGVTVYSPMMQYGLNAP 595
Score = 88.1 bits (186), Expect(3) = 7e-048
Identities = 33/55 (60%), Positives = 42/55 (76%)
Frame = +2 / +2
Query: 158 VGWAARDATGHLSPYSYTLRNTGPEDVVVKVLYCGICHTDIHQAKNHLGASKYPM 322
+GWAARD +G LSPYS++ R EDV +KVL+CGICHTD+H AKN G + YP+
Sbjct: 86 LGWAARDESGLLSPYSFSRRARKDEDVTIKVLFCGICHTDLHIAKNEWGNALYPI 250
Score = 58.3 bits (121), Expect(4) = 9e-023
Identities = 35/81 (43%), Positives = 40/81 (49%)
Frame = -2 / -1
Query: 666 GFVSPKCFSGLYTVTPAHSSGAACSGARPAGIFTTNFWSTTMVEANPPCVGRPSV*TSLY 487
G + P C GLYTVTPA S+GAA + R +G T W TT PP V PS T L
Sbjct: 594 GALRPYCIIGLYTVTPAQSNGAAPARDRLSGTRRT*SWLTTSTSEKPPWVVAPS*STPLE 415
Query: 486 DQIFLLQYCSTLALQGLHSRQ 424
+ Q S LQ H RQ
Sbjct: 414 VSTRVEQ*FSYPLLQVPHERQ 352
Score = 41.4 bits (84), Expect(4) = 9e-023
Identities = 17/25 (68%), Positives = 17/25 (68%)
Frame = -2 / -1
Query: 303 PRWFLAWWMSVWQIPQ*STFTTTSS 229
P FLA W SVWQIPQ ST TSS
Sbjct: 231 PHSFLAMWRSVWQIPQKSTLIVTSS 157
Score = 40.5 bits (82), Expect(3) = 7e-048
Identities = 19/31 (61%), Positives = 23/31 (74%)
Frame = +2 / +2
Query: 728 KAMGHHVTVISSSSKKRAEAMDHLGADAYLV 820
KA G VT ISSS +KR EA++ L ADA+LV
Sbjct: 656 KAFGMTVTGISSSPRKREEALERLCADAFLV 748
Score = 40.0 bits (81), Expect(4) = 9e-023
Identities = 21/32 (65%), Positives = 23/32 (71%)
Frame = -2 / -1
Query: 822 LTRYASAPRWSIASARFLDDELITVTWWPMAL 727
LT+ ASA R S AS+RFL DELI VT P AL
Sbjct: 750 LTKNASAQRRSSASSRFLGDELIPVTVIPNAL 655
Score = 38.6 bits (78), Expect = 0.088
Identities = 23/62 (37%), Positives = 32/62 (51%)
Frame = -1 / -3
Query: 418 NDHPDAYHVADAVLGHFGPDLHHLADHLVPRDHRIL*SPEVVLGLVDVRVADPAVEHLHH 239
N+ A+ V D D+ A +L+P + + +VLG V+V VADPA EHL
Sbjct: 346 NEVAHAHRVPDLEALDARADVGDDAHNLMPGNDGVEGVAPLVLGDVEVGVADPAEEHLDR 167
Query: 238 HI 233
HI
Sbjct: 166 HI 161
Score = 33.1 bits (66), Expect = 4.0
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = +1 / +1
Query: 235 CGGEGALLRDLPHGHPPGQE 294
C +GALLRDLPH P QE
Sbjct: 163 CDDQGALLRDLPHRPPHRQE 222
Score = 22.6 bits (43), Expect(4) = 9e-023
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = -2 / -1
Query: 201 *GERCPVASLAAHPT 157
*GER P +SLAA P+
Sbjct: 129 *GERRPDSSLAAQPS 85
>gb|BQ760493.1|BQ760493 EBro02_SQ005_D11_R root, 3 week, hydroponic grown, low nitrogen, cv
Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone
EBro02_SQ005_D11 5', mRNA sequence
Length = 434
Score = 155 bits (334), Expect = 4e-037
Identities = 72/123 (58%), Positives = 76/123 (61%)
Frame = -2 / -2
Query: 507 SV*TSLYDQIFLLQYCSTLALQGLHSRQHXXXXXXXXXXXXPYLAXXXXXXXXXXXXXXX 328
SV*TSLYDQIFLLQYCST AL G RQH YL
Sbjct: 433 SV*TSLYDQIFLLQYCSTFALHGRQWRQHPTITPTPTMSPTRYLLTSGPTSTTSPTTSCR 254
Query: 327 XTIGYFEAPRWFLAWWMSVWQIPQ*STFTTTSSGPVFLRV*E*GERCPVASLAAHPTTFL 148
T+GY EAPR FL WWMSVWQ+PQ F TTSSGPVFLRV *GER PVASLAAHP T +
Sbjct: 253 GTMGYLEAPRSFLTWWMSVWQMPQYLPFNTTSSGPVFLRVYV*GERWPVASLAAHPVTVV 74
Query: 147 SDA 139
S+A
Sbjct: 73 SEA 65
Score = 130 bits (279), Expect(2) = 2e-047
Identities = 51/61 (83%), Positives = 53/61 (86%)
Frame = +2 / +3
Query: 140 ASERKVVGWAARDATGHLSPYSYTLRNTGPEDVVVKVLYCGICHTDIHQAKNHLGASKYP 319
ASE V GWAARDATGHLSPY+YTLR TGPEDVV+K YCGICHTDIHQ KN LGASKYP
Sbjct: 66 ASETTVTGWAARDATGHLSPYTYTLRKTGPEDVVLKGKYCGICHTDIHQVKNDLGASKYP 245
Query: 320 M 322
M
Sbjct: 246 M 248
Score = 116 bits (248), Expect = 3e-025
Identities = 48/67 (71%), Positives = 53/67 (79%)
Frame = -1 / -1
Query: 421 PNDHPDAYHVADAVLGHFGPDLHHLADHLVPRDHRIL*SPEVVLGLVDVRVADPAVEHLH 242
P+DHP A HVADAVL HFGPDLHH A+H +P DH IL S +VVL LVDVRVA+ AV L
Sbjct: 347 PHDHPHADHVADAVLAHFGPDLHHFANHFMPWDHGILGSTQVVLDLVDVRVANAAVFTLQ 168
Query: 241 HHIFRAC 221
HHIFRAC
Sbjct: 167 HHIFRAC 147
Score = 79.9 bits (168), Expect(2) = 2e-047
Identities = 27/29 (93%), Positives = 27/29 (93%)
Frame = +2 / +3
Query: 422 CCRECSPCKANVEQYCNKKIWSYNDVYTD 508
CCR C PCKANVEQYCNKKIWSYNDVYTD
Sbjct: 348 CCRHCRPCKANVEQYCNKKIWSYNDVYTD 434
Score = 73.0 bits (153), Expect(2) = 7e-020
Identities = 29/40 (72%), Positives = 33/40 (82%)
Frame = +1 / +2
Query: 214 QEHRP*RCGGEGALLRDLPHGHPPGQEPPRGFKVSYGPWA 333
QE+RP*RCG EG +LR LPHGHPPGQE P F+VS+GP A
Sbjct: 140 QENRP*RCGVEG*ILRHLPHGHPPGQERPGCFQVSHGPTA 259
Score = 59.7 bits (124), Expect = 4e-008
Identities = 25/37 (67%), Positives = 26/37 (70%)
Frame = -3 / -3
Query: 332 AQGP*DTLKPRGGSWPGGCPCGRSRSRAPSPPHLQGL 222
A GP DT K G S PGGCPCG+ RS PS PHLQGL
Sbjct: 258 AVGPWDTWKHPGRS*PGGCPCGKCRSIYPSTPHLQGL 148
Score = 55.1 bits (114), Expect(2) = 4e-008
Identities = 22/50 (44%), Positives = 24/50 (48%)
Frame = +3 / +1
Query: 222 QALKMWW*XXXXXXXXXXXXXXXXXXXXLQSILWSLGTRWSARWWRSGPK 371
QALKMW * L SI WS G +W A+WWRSGPK
Sbjct: 148 QALKMWC*RVNTAAFATRTSTRSRTTWVLPSIPWSHGMKWLAKWWRSGPK 297
Score = 45.1 bits (92), Expect(2) = 7e-020
Identities = 19/28 (67%), Positives = 23/28 (82%)
Frame = +1 / +2
Query: 421 VLPRVQPLQGQR*AVLQQEDLVIQRRLH 504
VLP + +Q +R AVLQQEDLV+QRRLH
Sbjct: 347 VLPPLPAVQSERRAVLQQEDLVVQRRLH 430
Score = 23.1 bits (44), Expect(2) = 4e-008
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +3 / +1
Query: 474 RRSGHTTTST 503
RRSG TTTST
Sbjct: 400 RRSGRTTTST 429
>gb|CA014567.1|CA014567 HT11L08r HT Hordeum vulgare subsp. vulgare cDNA clone HT11L08
5-PRIME, mRNA sequence
Length = 622
Score = 101 bits (216), Expect(2) = 1e-041
Identities = 39/81 (48%), Positives = 52/81 (64%)
Frame = +2 / +3
Query: 425 CRECSPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASTMVVDQKFVVKIPAGLAPEQAA 604
CR C C E YC+ + + N V DG TQGGF+ +VV+Q +V+++P L+ AA
Sbjct: 360 CRSCGTCSKGYENYCSTLVLTSNGVDYDGATTQGGFSDVLVVNQDYVLRVPESLSLAGAA 539
Query: 605 PLLCAGVTVYSPLKHFGLTNP 667
PLLCAGVTVYSP+ +GL P
Sbjct: 540 PLLCAGVTVYSPMMQYGLNAP 602
Score = 89.0 bits (188), Expect(2) = 1e-041
Identities = 34/67 (50%), Positives = 45/67 (67%)
Frame = +2 / +3
Query: 122 NRMGSLASERKVVGWAARDATGHLSPYSYTLRNTGPEDVVVKVLYCGICHTDIHQAKNHL 301
+ S+ +GWAARD +G LSPYS++ R EDV +KVL+CGICHTD+H AKN
Sbjct: 57 SEQSSMEKGTPALGWAARDESGLLSPYSFSRRARKDEDVTIKVLFCGICHTDLHIAKNEW 236
Query: 302 GASKYPM 322
G + YP+
Sbjct: 237 GNALYPI 257
Score = 58.3 bits (121), Expect(3) = 4e-016
Identities = 35/81 (43%), Positives = 40/81 (49%)
Frame = -2 / -1
Query: 666 GFVSPKCFSGLYTVTPAHSSGAACSGARPAGIFTTNFWSTTMVEANPPCVGRPSV*TSLY 487
G + P C GLYTVTPA S+GAA + R +G T W TT PP V PS T L
Sbjct: 601 GALRPYCIIGLYTVTPAQSNGAAPARDRLSGTRRT*SWLTTSTSEKPPWVVAPS*STPLE 422
Query: 486 DQIFLLQYCSTLALQGLHSRQ 424
+ Q S LQ H RQ
Sbjct: 421 VSTRVEQ*FSYPLLQVPHERQ 359
Score = 41.4 bits (84), Expect(3) = 4e-016
Identities = 17/25 (68%), Positives = 17/25 (68%)
Frame = -2 / -1
Query: 303 PRWFLAWWMSVWQIPQ*STFTTTSS 229
P FLA W SVWQIPQ ST TSS
Sbjct: 238 PHSFLAMWRSVWQIPQKSTLIVTSS 164
Score = 38.6 bits (78), Expect = 0.088
Identities = 23/62 (37%), Positives = 32/62 (51%)
Frame = -1 / -3
Query: 418 NDHPDAYHVADAVLGHFGPDLHHLADHLVPRDHRIL*SPEVVLGLVDVRVADPAVEHLHH 239
N+ A+ V D D+ A +L+P + + +VLG V+V VADPA EHL
Sbjct: 353 NEVAHAHRVPDLEALDARADVGDDAHNLMPGNDGVEGVAPLVLGDVEVGVADPAEEHLDR 174
Query: 238 HI 233
HI
Sbjct: 173 HI 168
Score = 33.1 bits (66), Expect = 4.0
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = +1 / +2
Query: 235 CGGEGALLRDLPHGHPPGQE 294
C +GALLRDLPH P QE
Sbjct: 170 CDDQGALLRDLPHRPPHRQE 229
Score = 22.6 bits (43), Expect(3) = 4e-016
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = -2 / -1
Query: 201 *GERCPVASLAAHPT 157
*GER P +SLAA P+
Sbjct: 136 *GERRPDSSLAAQPS 92
>gb|BQ768318.1|BQ768318 EBro08_SQ011_J10_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ011_J10 5', mRNA sequence
Length = 589
Score = 99.6 bits (211), Expect(2) = 7e-041
Identities = 38/78 (48%), Positives = 51/78 (65%)
Frame = +2 / +1
Query: 425 CRECSPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASTMVVDQKFVVKIPAGLAPEQAA 604
CR C C E YC+ + + N V DG TQGGF+ +VV+Q +V+++P L+ AA
Sbjct: 349 CRSCGTCSKGYENYCSTLVLTSNGVDYDGATTQGGFSDVLVVNQDYVLRVPESLSLAGAA 528
Query: 605 PLLCAGVTVYSPLKHFGL 658
PLLCAGVTVYSP+ +GL
Sbjct: 529 PLLCAGVTVYSPMMQYGL 582
Score = 89.0 bits (188), Expect(2) = 7e-041
Identities = 34/67 (50%), Positives = 45/67 (67%)
Frame = +2 / +1
Query: 122 NRMGSLASERKVVGWAARDATGHLSPYSYTLRNTGPEDVVVKVLYCGICHTDIHQAKNHL 301
+ S+ +GWAARD +G LSPYS++ R EDV +KVL+CGICHTD+H AKN
Sbjct: 46 SEQSSMEKGTPALGWAARDESGLLSPYSFSRRARKDEDVTIKVLFCGICHTDLHIAKNEW 225
Query: 302 GASKYPM 322
G + YP+
Sbjct: 226 GNALYPI 246
Score = 56.5 bits (117), Expect(3) = 2e-015
Identities = 34/77 (44%), Positives = 38/77 (49%)
Frame = -2 / -3
Query: 654 PKCFSGLYTVTPAHSSGAACSGARPAGIFTTNFWSTTMVEANPPCVGRPSV*TSLYDQIF 475
P C GLYTVTPA S+GAA + R +G T W TT PP V PS T L
Sbjct: 578 PYCIIGLYTVTPAQSNGAAPARDRLSGTRRT*SWLTTSTSEKPPWVVAPS*STPLEVSTR 399
Query: 474 LLQYCSTLALQGLHSRQ 424
+ Q S LQ H RQ
Sbjct: 398 VEQ*FSYPLLQVPHERQ 348
Score = 41.4 bits (84), Expect(3) = 2e-015
Identities = 17/25 (68%), Positives = 17/25 (68%)
Frame = -2 / -3
Query: 303 PRWFLAWWMSVWQIPQ*STFTTTSS 229
P FLA W SVWQIPQ ST TSS
Sbjct: 227 PHSFLAMWRSVWQIPQKSTLIVTSS 153
Score = 38.6 bits (78), Expect = 0.088
Identities = 23/62 (37%), Positives = 32/62 (51%)
Frame = -1 / -2
Query: 418 NDHPDAYHVADAVLGHFGPDLHHLADHLVPRDHRIL*SPEVVLGLVDVRVADPAVEHLHH 239
N+ A+ V D D+ A +L+P + + +VLG V+V VADPA EHL
Sbjct: 342 NEVAHAHRVPDLEALDARADVGDDAHNLMPGNDGVEGVAPLVLGDVEVGVADPAEEHLDR 163
Query: 238 HI 233
HI
Sbjct: 162 HI 157
Score = 33.1 bits (66), Expect = 4.0
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = +1 / +3
Query: 235 CGGEGALLRDLPHGHPPGQE 294
C +GALLRDLPH P QE
Sbjct: 159 CDDQGALLRDLPHRPPHRQE 218
Score = 22.6 bits (43), Expect(3) = 2e-015
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = -2 / -3
Query: 201 *GERCPVASLAAHPT 157
*GER P +SLAA P+
Sbjct: 125 *GERRPDSSLAAQPS 81
>gb|BU994106.1|BU994106 HM05M03r HM Hordeum vulgare subsp. vulgare cDNA clone HM05M03
5-PRIME, mRNA sequence
Length = 648
Score = 98.7 bits (209), Expect(2) = 2e-040
Identities = 37/81 (45%), Positives = 53/81 (65%)
Frame = +2 / +2
Query: 425 CRECSPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASTMVVDQKFVVKIPAGLAPEQAA 604
C+ C C E +C I++YN V DG T GG++S +VV ++FVV+ P + ++ A
Sbjct: 308 CQSCESCDKGFENHCPGIIFTYNSVDRDGTVTHGGYSSMVVVHERFVVRFPDAMPLDKGA 487
Query: 605 PLLCAGVTVYSPLKHFGLTNP 667
PLLCAG+TVYSP+K+ GL P
Sbjct: 488 PLLCAGITVYSPMKYHGLNVP 550
Score = 88.6 bits (187), Expect(2) = 2e-040
Identities = 33/58 (56%), Positives = 44/58 (75%)
Frame = +2 / +2
Query: 149 RKVVGWAARDATGHLSPYSYTLRNTGPEDVVVKVLYCGICHTDIHQAKNHLGASKYPM 322
+K VG AA DA+G LSP + T R+TG +DV++K+LYCGICH+D+H KN +KYPM
Sbjct: 32 KKAVGLAALDASGRLSPLAITRRSTGDDDVMIKILYCGICHSDLHSIKNDWKNAKYPM 205
Score = 66.1 bits (138), Expect(3) = 7e-021
Identities = 33/59 (55%), Positives = 37/59 (62%)
Frame = -1 / -3
Query: 409 PDAYHVADAVLGHFGPDLHHLADHLVPRDHRIL*SPEVVLGLVDVRVADPAVEHLHHHI 233
PD VA LGH DL LA LVPRDH +L VVL V VRVADPAV++L+H I
Sbjct: 292 PDTDTVAGLELGHVLADLGDLAGDLVPRDHGVLSVLPVVLDAVQVRVADPAVQNLYHDI 116
Score = 57.4 bits (119), Expect = 2e-007
Identities = 30/57 (52%), Positives = 32/57 (56%)
Frame = -2 / -1
Query: 321 IGYFEAPRWFLAWWMSVWQIPQ*STFTTTSSGPVFLRV*E*GERCPVASLAAHPTTF 151
+GY + FL S WQIPQ F TSS PV LRV GER P AS AA PT F
Sbjct: 204 MGYLAFFQSFLMLCRSEWQIPQYRIFIMTSSSPVLLRVMASGERRPEASSAARPTAF 34
Score = 49.2 bits (101), Expect(3) = 7e-021
Identities = 28/59 (47%), Positives = 30/59 (50%)
Frame = -2 / -1
Query: 666 GFVSPKCFSGLYTVTPAHSSGAACSGARPAGIFTTNFWSTTMVEANPPCVGRPSV*TSL 490
G SP F GLYTV PAHS GA S +G TT TT + PP V PS T L
Sbjct: 549 GTFSPWYFMGLYTVMPAHSRGAPLSSGMASGNRTTKRSCTTTMLE*PPWVTVPSRSTEL 373
Score = 23.5 bits (45), Expect(3) = 7e-021
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -2 / -1
Query: 765 DELITVTWWPMAL 727
DELITVT+ P AL
Sbjct: 648 DELITVTFIPKAL 610
>gb|BQ661689.1|BQ661689 HM04O09u HM Hordeum vulgare subsp. vulgare cDNA clone HM04O09
3-PRIME, mRNA sequence
Length = 525
Score = 166 bits (357), Expect = 3e-040
Identities = 71/79 (89%), Positives = 75/79 (94%)
Frame = +2 / -2
Query: 956 IGEPLSFVSPMVMLGRKAITGSFIGSIDETAEVLQFCVDKGLTSQIEVVKMGYVNEALER 1135
I EPLSFVSPMVMLGRK ITGSFIGS+DET EVL+FCVDKGLTSQIEVVKM YVN+ALER
Sbjct: 473 IAEPLSFVSPMVMLGRKTITGSFIGSMDETEEVLKFCVDKGLTSQIEVVKMDYVNQALER 294
Query: 1136 LERNDVRYRFVVDVAGSNV 1192
LERNDVRYRFVVDVAGSN+
Sbjct: 293 LERNDVRYRFVVDVAGSNL 237
Score = 95.5 bits (202), Expect = 7e-019
Identities = 43/70 (61%), Positives = 47/70 (67%)
Frame = -1 / +3
Query: 1141 LQPLQRXXXXXXXXXXXLGGEPLVDAELKHLSGLVDAADEAPRDGLPPQHHHGRHEAQGL 962
L+PL+R L GEPLVDAEL+ L LV A DEAPRDGLPPQHHH HEA+ L
Sbjct: 288 LEPLERLVDVVHLDDLDLRGEPLVDAELEDLLRLVHAPDEAPRDGLPPQHHHWGHEAERL 467
Query: 961 ADDAQQHELA 932
D A QHELA
Sbjct: 468 RDHAHQHELA 497
Score = 88.6 bits (187), Expect = 8e-017
Identities = 40/48 (83%), Positives = 42/48 (87%)
Frame = -2 / +1
Query: 1107 ILTTSIWEVSPLSTQN*STSAVSSMLPMKLPVMAFRPSITMGDTKLRG 964
ILTTSI EVSPLSTQN TS+VSSMLPMKLPVM F PSIT+GDTKL G
Sbjct: 322 ILTTSICEVSPLSTQNLRTSSVSSMLPMKLPVMVFLPSITIGDTKLSG 465
Score = 45.5 bits (93), Expect = 8e-004
Identities = 19/27 (70%), Positives = 20/27 (74%)
Frame = +1 / -1
Query: 1027 RQHRRDR*GASVLRRQGAHLPDRGGQD 1107
R+H RD G VLRRQGAHL DRG QD
Sbjct: 402 REHGRDGGGPQVLRRQGAHLADRGRQD 322
>gb|CK124014.1|CK124014 BES1824106h23 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010H236 5-PRIME, mRNA sequence
Length = 509
Score = 166 bits (357), Expect = 3e-040
Identities = 71/79 (89%), Positives = 75/79 (94%)
Frame = +2 / +2
Query: 956 IGEPLSFVSPMVMLGRKAITGSFIGSIDETAEVLQFCVDKGLTSQIEVVKMGYVNEALER 1135
I EPLSFVSPMVMLGRK ITGSFIGS+DET EVL+FCVDKGLTSQIEVVKM YVN+ALER
Sbjct: 47 IAEPLSFVSPMVMLGRKTITGSFIGSMDETEEVLKFCVDKGLTSQIEVVKMDYVNQALER 226
Query: 1136 LERNDVRYRFVVDVAGSNV 1192
LERNDVRYRFVVDVAGSN+
Sbjct: 227 LERNDVRYRFVVDVAGSNL 283
Score = 95.5 bits (202), Expect = 7e-019
Identities = 43/70 (61%), Positives = 47/70 (67%)
Frame = -1 / -2
Query: 1141 LQPLQRXXXXXXXXXXXLGGEPLVDAELKHLSGLVDAADEAPRDGLPPQHHHGRHEAQGL 962
L+PL+R L GEPLVDAEL+ L LV A DEAPRDGLPPQHHH HEA+ L
Sbjct: 232 LEPLERLVDVVHLDDLDLRGEPLVDAELEDLLRLVHAPDEAPRDGLPPQHHHWGHEAERL 53
Query: 961 ADDAQQHELA 932
D A QHELA
Sbjct: 52 RDHAHQHELA 23
Score = 88.6 bits (187), Expect = 8e-017
Identities = 40/48 (83%), Positives = 42/48 (87%)
Frame = -2 / -3
Query: 1107 ILTTSIWEVSPLSTQN*STSAVSSMLPMKLPVMAFRPSITMGDTKLRG 964
ILTTSI EVSPLSTQN TS+VSSMLPMKLPVM F PSIT+GDTKL G
Sbjct: 198 ILTTSICEVSPLSTQNLRTSSVSSMLPMKLPVMVFLPSITIGDTKLSG 55
Score = 45.5 bits (93), Expect = 8e-004
Identities = 19/27 (70%), Positives = 20/27 (74%)
Frame = +1 / +1
Query: 1027 RQHRRDR*GASVLRRQGAHLPDRGGQD 1107
R+H RD G VLRRQGAHL DRG QD
Sbjct: 118 REHGRDGGGPQVLRRQGAHLADRGRQD 198
>gb|BE559002.2|BE559002 HV_CEb0022D12f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0022D12f, mRNA sequence
Length = 694
Score = 99.1 bits (210), Expect(3) = 7e-040
Identities = 39/81 (48%), Positives = 53/81 (65%)
Frame = +2 / +3
Query: 425 CRECSPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASTMVVDQKFVVKIPAGLAPEQAA 604
CR C C + + +C + + + V DG TQGGF+ +VVD+ +VV++P GL + AA
Sbjct: 198 CRSCVSCSSGHDNHCPTLVLTCSAVDYDGATTQGGFSDVLVVDKGYVVRVPEGLPLDGAA 377
Query: 605 PLLCAGVTVYSPLKHFGLTNP 667
PLLCAGVTVYSP+ FGL P
Sbjct: 378 PLLCAGVTVYSPMMEFGLNAP 440
Score = 64.3 bits (134), Expect(3) = 5e-021
Identities = 36/75 (48%), Positives = 42/75 (56%)
Frame = -2 / -1
Query: 666 GFVSPKCFSGLYTVTPAHSSGAACSGARPAGIFTTNFWSTTMVEANPPCVGRPSV*TSLY 487
G + P GLYTVTPA SSGAA S RP+G TT STT NPP V PS T+L
Sbjct: 439 GALRPNSIIGLYTVTPAQSSGAAPSRGRPSGTRTT*PLSTTSTSENPPWVVAPS*STALQ 260
Query: 486 DQIFLLQYCSTLALQ 442
+ + Q+ S LQ
Sbjct: 259 VRTSVGQWLSCPLLQ 215
Score = 53.3 bits (110), Expect(3) = 7e-040
Identities = 18/30 (60%), Positives = 23/30 (76%)
Frame = +2 / +3
Query: 233 DVVVKVLYCGICHTDIHQAKNHLGASKYPM 322
DV +KVL+CGICHTD+H KN G + YP+
Sbjct: 6 DVTIKVLFCGICHTDLHIVKNEWGNALYPV 95
Score = 51.0 bits (105), Expect(3) = 7e-040
Identities = 27/57 (47%), Positives = 30/57 (52%)
Frame = +2 / +3
Query: 728 KAMGHHVTVISSSSKKRAEAMDHLGADAYLVXXXXXXXXXXXXXXXYIIDTVPVHHP 898
KA G VTVISSS +KR EA+ LGADA+LV IIDTV P
Sbjct: 501 KAFGMTVTVISSSPRKREEAVKRLGADAFLVSQDPEQMKAAAGTMDGIIDTVSAGPP 671
Score = 41.4 bits (84), Expect(3) = 5e-021
Identities = 21/32 (65%), Positives = 23/32 (71%)
Frame = -2 / -1
Query: 822 LTRYASAPRWSIASARFLDDELITVTWWPMAL 727
LT+ ASAP AS+RFL DELITVT P AL
Sbjct: 595 LTKNASAPSRLTASSRFLGDELITVTVIPNAL 500
Score = 36.8 bits (74), Expect = 0.31
Identities = 15/24 (62%), Positives = 15/24 (62%)
Frame = -2 / -1
Query: 303 PRWFLAWWMSVWQIPQ*STFTTTS 232
P FL W SVWQIPQ ST TS
Sbjct: 76 PHSFLTIWRSVWQIPQKSTLIVTS 5
Score = 35.0 bits (70), Expect = 1.1
Identities = 14/21 (66%), Positives = 15/21 (71%)
Frame = +1 / +2
Query: 232 RCGGEGALLRDLPHGHPPGQE 294
RC +GALLRDLPH P QE
Sbjct: 5 RCDDQGALLRDLPHRPPYRQE 67
Score = 33.6 bits (67), Expect(3) = 5e-021
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = -1 / -3
Query: 343 DHLVPRDHRIL*SPEVVLGLVDVRVADPAVEHLHHHI 233
++L+P D + +VL ++V VADPA EHL HI
Sbjct: 116 NNLMPGDDGVEGVSPLVLDDMEVGVADPAEEHLDRHI 6
>gb|AL510922.1|AL510922 AL510922 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY06G20u 3',
mRNA sequence
Length = 474
Score = 164 bits (353), Expect = 1e-039
Identities = 70/79 (88%), Positives = 74/79 (93%)
Frame = +2 / -2
Query: 956 IGEPLSFVSPMVMLGRKAITGSFIGSIDETAEVLQFCVDKGLTSQIEVVKMGYVNEALER 1135
I EPL FVSPMVMLGRK ITGSFIGS+DET EVL+FCVDKGLTSQIEVVKM YVN+ALER
Sbjct: 401 IAEPLXFVSPMVMLGRKTITGSFIGSMDETEEVLKFCVDKGLTSQIEVVKMDYVNQALER 222
Query: 1136 LERNDVRYRFVVDVAGSNV 1192
LERNDVRYRFVVDVAGSN+
Sbjct: 221 LERNDVRYRFVVDVAGSNL 165
Score = 90.9 bits (192), Expect = 2e-017
Identities = 42/70 (60%), Positives = 45/70 (64%)
Frame = -1 / +3
Query: 1141 LQPLQRXXXXXXXXXXXLGGEPLVDAELKHLSGLVDAADEAPRDGLPPQHHHGRHEAQGL 962
L+PL+R L GEPLVDAEL+ L LV A DEAPRDGLPPQHHH HE L
Sbjct: 216 LEPLERLVDVVHLDDLDLRGEPLVDAELEDLLRLVHAPDEAPRDGLPPQHHHWGHEX*RL 395
Query: 961 ADDAQQHELA 932
D A QHELA
Sbjct: 396 RDHAHQHELA 425
Score = 86.3 bits (182), Expect = 4e-016
Identities = 44/75 (58%), Positives = 46/75 (61%)
Frame = -2 / +1
Query: 1107 ILTTSIWEVSPLSTQN*STSAVSSMLPMKLPVMAFRPSITMGDTKLRGXXXXXXXXXXXX 928
ILTTSI EVSPLSTQN TS+VSSMLPMKLPVM F PSIT+GDT L G
Sbjct: 250 ILTTSICEVSPLSTQNLRTSSVSSMLPMKLPVMVFLPSITIGDTXLSGSAITPISTSLPS 429
Query: 927 XXXXXXXXXSGWCTG 883
SG TG
Sbjct: 430 ILSSARXGSSGCFTG 474
Score = 45.5 bits (93), Expect(2) = 4e-004
Identities = 19/27 (70%), Positives = 20/27 (74%)
Frame = +1 / -1
Query: 1027 RQHRRDR*GASVLRRQGAHLPDRGGQD 1107
R+H RD G VLRRQGAHL DRG QD
Sbjct: 330 REHGRDGGGPQVLRRQGAHLADRGRQD 250
Score = 21.7 bits (41), Expect(2) = 4e-004
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +2 / -2
Query: 884 PVHHPLEP 907
PV HPLEP
Sbjct: 473 PVKHPLEP 450
>gb|BF257384.2|BF257384 HVSMEf0012L22f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0012L22f, mRNA sequence
Length = 538
Score = 92.3 bits (195), Expect(2) = 1e-038
Identities = 36/76 (47%), Positives = 50/76 (65%)
Frame = +2 / +1
Query: 425 CRECSPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASTMVVDQKFVVKIPAGLAPEQAA 604
CR C C + + +C + + + V DG TQGGF+ +VVD+ +VV++P GL + AA
Sbjct: 310 CRSCVSCSSGHDNHCPTLVLTCSAVDYDGATTQGGFSDVLVVDKGYVVRVPEGLPLDGAA 489
Query: 605 PLLCAGVTVYSPLKHF 652
PLLCAGVTVYSP+ F
Sbjct: 490 PLLCAGVTVYSPMMEF 537
Score = 89.0 bits (188), Expect(2) = 1e-038
Identities = 32/67 (47%), Positives = 46/67 (68%)
Frame = +2 / +1
Query: 122 NRMGSLASERKVVGWAARDATGHLSPYSYTLRNTGPEDVVVKVLYCGICHTDIHQAKNHL 301
++ S+A +GWAA+D +G LSPYS++ R +DV +KVL+CGICHTD+H KN
Sbjct: 7 SKQSSMAKGMPAIGWAAKDTSGVLSPYSFSRRAQKDDDVTIKVLFCGICHTDLHIVKNEW 186
Query: 302 GASKYPM 322
G + YP+
Sbjct: 187 GNALYPV 207
Score = 60.6 bits (126), Expect(2) = 2e-017
Identities = 34/66 (51%), Positives = 39/66 (59%)
Frame = -2 / -3
Query: 639 GLYTVTPAHSSGAACSGARPAGIFTTNFWSTTMVEANPPCVGRPSV*TSLYDQIFLLQYC 460
GLYTVTPA SSGAA S RP+G TT STT NPP V PS T+L + + Q+
Sbjct: 524 GLYTVTPAQSSGAAPSRGRPSGTRTT*PLSTTSTSENPPWVVAPS*STALQVRTSVGQWL 345
Query: 459 STLALQ 442
S LQ
Sbjct: 344 SCPLLQ 327
Score = 51.9 bits (107), Expect(2) = 2e-017
Identities = 27/48 (56%), Positives = 27/48 (56%)
Frame = -2 / -3
Query: 303 PRWFLAWWMSVWQIPQ*STFTTTSSGPVFLRV*E*GERCPVASLAAHP 160
P FL W SVWQIPQ ST TSS LR *GER P S AA P
Sbjct: 188 PHSFLTIWRSVWQIPQKSTLIVTSSSF*ALREKL*GERTPDVSFAAQP 45
Score = 35.0 bits (70), Expect = 1.1
Identities = 14/21 (66%), Positives = 15/21 (71%)
Frame = +1 / +3
Query: 232 RCGGEGALLRDLPHGHPPGQE 294
RC +GALLRDLPH P QE
Sbjct: 117 RCDDQGALLRDLPHRPPYRQE 179
Score = 33.6 bits (67), Expect = 2.9
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = -1 / -2
Query: 343 DHLVPRDHRIL*SPEVVLGLVDVRVADPAVEHLHHHI 233
++L+P D + +VL ++V VADPA EHL HI
Sbjct: 228 NNLMPGDDGVEGVSPLVLDDMEVGVADPAEEHLDRHI 118
>gb|BI957209.1|BI957209 HVSMEn0008C08f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0008C08f,
mRNA sequence
Length = 651
Score = 90.4 bits (191), Expect(3) = 1e-037
Identities = 46/99 (46%), Positives = 49/99 (49%)
Frame = +2 / +2
Query: 725 AKAMGHHVTVISSSSKKRAEAMDHLGADAYLVXXXXXXXXXXXXXXXYIIDTVPVHHPLE 904
AK+MGHHVTVISSS+KKRAEA+D L AD YLV Y IDT PV PLE
Sbjct: 209 AKSMGHHVTVISSSNKKRAEAVDDLXADEYLVSSDADQMAAAADSLDYNIDTXPVKQPLE 388
Query: 905 PYXXXXXXXXXXXXXXXIGEPLSFVSPMVMLGRKAITGS 1021
PY I EPL F G K GS
Sbjct: 389 PYLALLKMDGKLMLMGDIPEPLIFWFQW*SWGGKTFPGS 505
Score = 76.2 bits (160), Expect(3) = 1e-029
Identities = 30/48 (62%), Positives = 33/48 (68%)
Frame = -2 / -1
Query: 666 GFVSPKCFSGLYTVTPAHSSGAACSGARPAGIFTTNFWSTTMVEANPP 523
G +SPKCFSGLYTVTPAHSSGAACSG++P G EA PP
Sbjct: 150 GVISPKCFSGLYTVTPAHSSGAACSGSKPGGDLHHELLIDDQAEAKPP 7
Score = 69.8 bits (146), Expect(3) = 1e-029
Identities = 34/60 (56%), Positives = 35/60 (58%)
Frame = -2 / -1
Query: 897 GWCTGTVXXXXXXXXXXXXXXXXXELTRYASAPRWSIASARFLDDELITVTWWPMALATF 718
G TG V ELTRY+SA R S ASARFL DELITVTWWPM LATF
Sbjct: 381 GCFTGXVSIL*SSESAAAAIWSASELTRYSSAXRSSTASARFLLDELITVTWWPMDLATF 202
Score = 68.9 bits (144), Expect(3) = 1e-037
Identities = 27/31 (87%), Positives = 27/31 (87%)
Frame = +2 / +2
Query: 575 PAGLAPEQAAPLLCAGVTVYSPLKHFGLTNP 667
P GL PEQAAPLLCAGVTVYSPLKHFGL P
Sbjct: 59 PPGLLPEQAAPLLCAGVTVYSPLKHFGLMTP 151
Score = 43.2 bits (88), Expect(2) = 2e-007
Identities = 22/47 (46%), Positives = 24/47 (51%)
Frame = -1 / -3
Query: 784 LRALLGRRADHRHVVAHGLGYLXXXXXXXXXXXXXXXXARVRQPKVL 644
L LL RADHRHVVAHGLG+L A QP+VL
Sbjct: 268 LGPLLVGRADHRHVVAHGLGHLHAHVAHAAQAQDPAAEAGGHQPEVL 128
Score = 38.6 bits (78), Expect(4) = 2e-008
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = +1 / +1
Query: 727 QGHGPPRDGDQLVVQEA 777
Q HGPPRDGDQLV QEA
Sbjct: 211 QVHGPPRDGDQLVQQEA 261
Score = 36.8 bits (74), Expect(2) = 0.008
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = -3 / -2
Query: 776 ASWTTS*SPSRGGPWPW 726
AS TS*SPSRGGPW W
Sbjct: 260 ASCWTS*SPSRGGPWTW 210
Score = 36.8 bits (74), Expect(3) = 1e-037
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = +2 / +1
Query: 542 MVVDQKFVVKIPAGLA 589
+VVDQKFVVKIPAGLA
Sbjct: 25 LVVDQKFVVKIPAGLA 72
Score = 33.1 bits (66), Expect(4) = 2e-008
Identities = 15/29 (51%), Positives = 15/29 (51%)
Frame = +1 / +1
Query: 574 PXXXXXXXXXXXXVRWRDGVQPAEALWAD 660
P VR RDGVQPAEAL AD
Sbjct: 58 PAGLAAGAGGAAAVRGRDGVQPAEALRAD 144
Score = 32.7 bits (65), Expect(2) = 2e-007
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = -2 / -2
Query: 621 PAHSSGAACSGARPAGIFTTNFWSTT 544
P ++ A PAGIFTTNF STT
Sbjct: 104 PRTAAAPPAPAASPAGIFTTNF*STT 27
Score = 26.3 bits (51), Expect(2) = 0.008
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -1 / -1
Query: 574 DLHHKLLVDDHGGGESTLR 518
DLHH+LL+DD + R
Sbjct: 57 DLHHELLIDDQAEAKPPAR 1
Score = 23.5 bits (45), Expect(4) = 2e-008
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +1 / +3
Query: 544 GRRPEVCGEDP 576
GRR EV GEDP
Sbjct: 27 GRRSEVRGEDP 59
Score = 23.1 bits (44), Expect(4) = 2e-008
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +2 / +1
Query: 968 LSFVSPMVMLGRKAITG 1018
L+ + PMV LGRK + G
Sbjct: 451 LNILVPMVKLGRKNLPG 501
Score = 22.6 bits (43), Expect(3) = 1e-029
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = -1 / -3
Query: 1021 APRDGLPPQHHHGRHEAQGLADDAQQHELA 932
A R+G E GL D A QHELA
Sbjct: 505 ASREGFSSPASPLEPEY*GLRDIAHQHELA 416
>gb|AL504684.1|AL504684 AL504684 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW06B04V 5', mRNA sequence
Length = 700
Score = 95.9 bits (203), Expect(2) = 5e-037
Identities = 36/77 (46%), Positives = 51/77 (66%)
Frame = +2 / +2
Query: 425 CRECSPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASTMVVDQKFVVKIPAGLAPEQAA 604
C +C C ++ E YC+K +YN V+ DG T GG++S V ++FVV+IP L + A
Sbjct: 383 CLDCEQCDSSQENYCDKVALTYNGVFWDGSITYGGYSSMYVAHKRFVVRIPDSLPLDXXA 562
Query: 605 PLLCAGVTVYSPLKHFG 655
PLLCAG+TVY+P+K G
Sbjct: 563 PLLCAGITVYTPMKKHG 613
Score = 79.9 bits (168), Expect(2) = 5e-037
Identities = 28/56 (50%), Positives = 38/56 (67%)
Frame = +2 / +2
Query: 155 VVGWAARDATGHLSPYSYTLRNTGPEDVVVKVLYCGICHTDIHQAKNHLGASKYPM 322
V GWAA D +G + PY++ R G +DV +KVLYCG+CHTD+H N G + YP+
Sbjct: 113 VSGWAAMDESGTMVPYAFKRRENGVDDVTIKVLYCGMCHTDLHFINNDWGITMYPV 280
Score = 60.6 bits (126), Expect(2) = 4e-018
Identities = 28/55 (50%), Positives = 33/55 (60%)
Frame = -2 / -2
Query: 318 GYFEAPRWFLAWWMSVWQIPQ*STFTTTSSGPVFLRV*E*GERCPVASLAAHPTT 154
GY P+ L W SVW +PQ*ST TSS P LR+ *G P +S+AAHP T
Sbjct: 276 GYMVMPQSLLMKWRSVWHMPQ*STLMVTSSTPFSLRLKA*GTIVPDSSMAAHPLT 112
Score = 54.7 bits (113), Expect(2) = 4e-018
Identities = 29/56 (51%), Positives = 32/56 (57%)
Frame = -2 / -2
Query: 657 SPKCFSGLYTVTPAHSSGAACSGARPAGIFTTNFWSTTMVEANPPCVGRPSV*TSL 490
SP F G+YTV PAHSSGA S R +GI TTN T + PP V PS T L
Sbjct: 615 SPCFFIGVYTVIPAHSSGAXXSSGRLSGIRTTNLLCATYMLE*PP*VMLPSQKTPL 448
Score = 29.5 bits (58), Expect(2) = 5.9
Identities = 23/75 (30%), Positives = 32/75 (42%)
Frame = +1 / +1
Query: 421 VLPRVQPLQGQR*AVLQQEDLVIQRRLH*WTAHAGWIRLHHGRRPEVCGEDPXXXXXXXX 600
+LPR++ ++ +L+Q +QRRL H + H EV G DP
Sbjct: 379 LLPRLRAVRQLPGELLRQGRAHLQRRLLGRQHHLRRLLQHVRGAQEVRGADPGQPAAGXG 558
Query: 601 XXXXVRWRDGVQPAE 645
VR GV P E
Sbjct: 559 GAAAVRRDHGVHPDE 603
Score = 23.5 bits (45), Expect(2) = 5.9
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +1 / +1
Query: 244 EGALLRDLPHGHPPGQE 294
+GALLR +PH P Q+
Sbjct: 202 QGALLRHVPHRPPLHQQ 252
>gb|BI951701.1|BI951701 HVSMEm0002B16f Hordeum vulgare green seedling EST library
HVcDNA0014 (Blumeria infected) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEm0002B16f, mRNA sequence
Length = 829
Score = 97.7 bits (207), Expect(3) = 6e-037
Identities = 39/79 (49%), Positives = 53/79 (67%)
Frame = +2 / +3
Query: 425 CRECSPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASTMVVDQKFVVKIPAGLAPEQAA 604
CR C C + + +C + + + V DG TQGGF+ +VVD+ +VV++P GL + AA
Sbjct: 426 CRSCVSCSSGHDNHCPTLVLTCSAVDYDGATTQGGFSDVLVVDKGYVVRVPGGLPLDGAA 605
Query: 605 PLLCAGVTVYSPLKHFGLT 661
PLLCAGVTVYSP+ FGLT
Sbjct: 606 PLLCAGVTVYSPMIGFGLT 662
Score = 62.0 bits (129), Expect(2) = 1e-013
Identities = 36/73 (49%), Positives = 40/73 (54%)
Frame = -2 / -1
Query: 660 VSPKCFSGLYTVTPAHSSGAACSGARPAGIFTTNFWSTTMVEANPPCVGRPSV*TSLYDQ 481
V P GLYTVTPA SSGAA S RP G TT STT NPP V PS T+L +
Sbjct: 661 VRPNPIIGLYTVTPAQSSGAAPSRGRPPGTRTT*PLSTTSTSENPPWVVAPS*STALQVR 482
Query: 480 IFLLQYCSTLALQ 442
+ Q+ S LQ
Sbjct: 481 TSVGQWLSCPLLQ 443
Score = 54.2 bits (112), Expect(3) = 6e-037
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = +2 / +3
Query: 230 EDVVVKVLYCGICHTDIHQAKNHLGASKYPM 322
+DV +KVL+CGICHTD+H KN G + YP+
Sbjct: 231 DDVTIKVLFCGICHTDLHIVKNEWGNALYPV 323
Score = 41.4 bits (84), Expect(3) = 6e-037
Identities = 14/34 (41%), Positives = 24/34 (70%)
Frame = +2 / +3
Query: 122 NRMGSLASERKVVGWAARDATGHLSPYSYTLRNT 223
++ S+A +GWAA+D +G LSPYS++ R++
Sbjct: 33 SKQSSMAKGMPAIGWAAKDTSGVLSPYSFSRRSS 134
Score = 38.6 bits (78), Expect(2) = 1e-013
Identities = 16/25 (64%), Positives = 16/25 (64%)
Frame = -2 / -1
Query: 303 PRWFLAWWMSVWQIPQ*STFTTTSS 229
P FL W SVWQIPQ ST TSS
Sbjct: 304 PHSFLTIWRSVWQIPQKSTLIVTSS 230
Score = 35.0 bits (70), Expect = 1.1
Identities = 14/21 (66%), Positives = 15/21 (71%)
Frame = +1 / +2
Query: 232 RCGGEGALLRDLPHGHPPGQE 294
RC +GALLRDLPH P QE
Sbjct: 233 RCDDQGALLRDLPHRPPYRQE 295
Score = 33.6 bits (67), Expect = 2.9
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = -1 / -3
Query: 343 DHLVPRDHRIL*SPEVVLGLVDVRVADPAVEHLHHHI 233
++L+P D + +VL ++V VADPA EHL HI
Sbjct: 344 NNLMPGDDGVEGVSPLVLDDMEVGVADPAEEHLDRHI 234
>gb|BQ758620.1|BQ758620 EBma07_SQ002_F09_R maternal, 21 DPA, no treatment, cv Optic, EBma07
Hordeum vulgare subsp. vulgare cDNA clone
EBma07_SQ002_F09 5', mRNA sequence
Length = 240
Score = 147 bits (316), Expect = 1e-034
Identities = 59/62 (95%), Positives = 59/62 (95%)
Frame = +2 / +3
Query: 482 WSYNDVYTDGRPTQGGFASTMVVDQKFVVKIPAGLAPEQAAPLLCAGVTVYSPLKHFGLT 661
WSYNDVYTDGRPTQGGFAS MVVDQKFVVKIPAGLAPEQAAPLLCAGVTVYSPLKHFGL
Sbjct: 3 WSYNDVYTDGRPTQGGFASAMVVDQKFVVKIPAGLAPEQAAPLLCAGVTVYSPLKHFGLM 182
Query: 662 NP 667
P
Sbjct: 183 TP 188
Score = 134 bits (288), Expect = 1e-030
Identities = 55/62 (88%), Positives = 56/62 (90%)
Frame = -2 / -3
Query: 666 GFVSPKCFSGLYTVTPAHSSGAACSGARPAGIFTTNFWSTTMVEANPPCVGRPSV*TSLY 487
G +SPKCFSGLYTVTPAHSSGAACSGA PAGIFTTNF STTM EA PPCVG PSV*TSLY
Sbjct: 187 GVISPKCFSGLYTVTPAHSSGAACSGASPAGIFTTNF*STTMAEAKPPCVGLPSV*TSLY 8
Query: 486 DQ 481
DQ
Sbjct: 7 DQ 2
Score = 77.1 bits (162), Expect = 2e-013
Identities = 36/60 (60%), Positives = 38/60 (63%)
Frame = +1 / +2
Query: 481 LVIQRRLH*WTAHAGWIRLHHGRRPEVCGEDPXXXXXXXXXXXXVRWRDGVQPAEALWAD 660
LV+QRRLH A AG +RL HGRR EV GEDP VR RDGVQPAEAL AD
Sbjct: 2 LVVQRRLHRRQADAGRLRLRHGRRSEVRGEDPRRACAGASGAAAVRGRDGVQPAEALRAD 181
Score = 51.5 bits (106), Expect = 1e-005
Identities = 22/41 (53%), Positives = 23/41 (56%)
Frame = -3 / -1
Query: 635 CTPSRQRTXXXXXXXXXXXPGSSPQTSGRRPWWRRIHPAWA 513
CTPSR RT GSSP+TS RRPW RR PA A
Sbjct: 156 CTPSRPRTAAAPLAPAQARRGSSPRTSDRRPWRRRSRPASA 34
Score = 48.7 bits (100), Expect = 8e-005
Identities = 16/23 (69%), Positives = 21/23 (91%)
Frame = -1 / -2
Query: 574 DLHHKLLVDDHGGGESTLRGPSI 506
DLHH+LL+DDHGGGE+ LR P++
Sbjct: 95 DLHHELLIDDHGGGEAALRRPAV 27
>gb|BG300015.1|BG300015 HVSMEa0022P19f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0022P19f, mRNA sequence
Length = 809
Score = 82.6 bits (174), Expect(2) = 9e-034
Identities = 33/78 (42%), Positives = 46/78 (58%)
Frame = +2 / +1
Query: 425 CRECSPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASTMVVDQKFVVKIPAGLAPEQAA 604
CR C C E YC+ + ++N V DG TQ GF+ +VV+Q FV+++P L+ A
Sbjct: 349 CRSCCTCSKGYENYCSTLVLTFNGVDYDGATTQWGFSDVLVVNQDFVLRVPESLSLAGAG 528
Query: 605 PLLCAGVTVYSPLKHFGL 658
P + +GVTV SPL H L
Sbjct: 529 PFVLSGVTVSSPLIHTAL 582
Score = 82.2 bits (173), Expect(2) = 9e-034
Identities = 32/67 (47%), Positives = 43/67 (64%)
Frame = +2 / +1
Query: 122 NRMGSLASERKVVGWAARDATGHLSPYSYTLRNTGPEDVVVKVLYCGICHTDIHQAKNHL 301
+ S+ +GWAARD +G LSPYS++ R EDV +KVL+CGI HTD+H KN
Sbjct: 46 SEQSSMEKGTPALGWAARDESGLLSPYSFSRRARKDEDVTIKVLFCGIWHTDLHIGKNEW 225
Query: 302 GASKYPM 322
G + YP+
Sbjct: 226 GNALYPI 246
Score = 39.1 bits (79), Expect(3) = 3e-008
Identities = 27/73 (36%), Positives = 34/73 (46%)
Frame = -2 / -1
Query: 642 SGLYTVTPAHSSGAACSGARPAGIFTTNFWSTTMVEANPPCVGRPSV*TSLYDQIFLLQY 463
+GL TVTP ++G A + R +G +T W TT P V PS T L + Q
Sbjct: 566 NGLDTVTPDKTNGPAPARDRLSGTRSTKSWLTTSTSEKPHWVVAPS*STPLKVSTRVEQ* 387
Query: 462 CSTLALQGLHSRQ 424
S LQ H RQ
Sbjct: 386 FSYPLLQVQHERQ 348
Score = 33.6 bits (67), Expect(3) = 3e-008
Identities = 21/62 (33%), Positives = 29/62 (46%)
Frame = -1 / -3
Query: 418 NDHPDAYHVADAVLGHFGPDLHHLADHLVPRDHRIL*SPEVVLGLVDVRVADPAVEHLHH 239
N+ A+ V D D+ A +L+P + + +VL V V V DPA EHL
Sbjct: 342 NEVAHAHRVTDLEALDARADVGDDAHNLMPGNDGVKGVAPLVLADVQVGVPDPAEEHLDR 163
Query: 238 HI 233
HI
Sbjct: 162 HI 157
Score = 22.6 bits (43), Expect(3) = 3e-008
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = -2 / -1
Query: 201 *GERCPVASLAAHPT 157
*GER P +SLAA P+
Sbjct: 125 *GERRPDSSLAAQPS 81
>gb|BG299988.1|BG299988 HVSMEa0022N15f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0022N15f, mRNA sequence
Length = 787
Score = 101 bits (216), Expect(2) = 1e-033
Identities = 39/81 (48%), Positives = 52/81 (64%)
Frame = +2 / +3
Query: 425 CRECSPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASTMVVDQKFVVKIPAGLAPEQAA 604
CR C C E YC+ + + N V DG TQGGF+ +VV+Q +V+++P L+ AA
Sbjct: 102 CRSCGTCSKGYENYCSTLVLTSNGVDYDGATTQGGFSDVLVVNQDYVLRVPESLSLAGAA 281
Query: 605 PLLCAGVTVYSPLKHFGLTNP 667
PLLCAGVTVYSP+ +GL P
Sbjct: 282 PLLCAGVTVYSPMMQYGLNAP 344
Score = 62.5 bits (130), Expect(2) = 1e-033
Identities = 30/60 (50%), Positives = 34/60 (56%)
Frame = +2 / +3
Query: 728 KAMGHHVTVISSSSKKRAEAMDHLGADAYLVXXXXXXXXXXXXXXXYIIDTVPVHHPLEP 907
KA G VTVISSS +KR EA++ LGADA+LV IIDTV HPL P
Sbjct: 405 KAFGMTVTVISSSPRKREEALERLGADAFLVSQDAEQMKAAAGTMDGIIDTVSAGHPLVP 584
Score = 58.3 bits (121), Expect(2) = 6e-016
Identities = 35/81 (43%), Positives = 40/81 (49%)
Frame = -2 / -1
Query: 666 GFVSPKCFSGLYTVTPAHSSGAACSGARPAGIFTTNFWSTTMVEANPPCVGRPSV*TSLY 487
G + P C GLYTVTPA S+GAA + R +G T W TT PP V PS T L
Sbjct: 343 GALRPYCIIGLYTVTPAQSNGAAPARDRLSGTRRT*SWLTTSTSEKPPWVVAPS*STPLE 164
Query: 486 DQIFLLQYCSTLALQGLHSRQ 424
+ Q S LQ H RQ
Sbjct: 163 VSTRVEQ*FSYPLLQVPHERQ 101
Score = 46.4 bits (95), Expect(2) = 6e-016
Identities = 23/32 (71%), Positives = 25/32 (78%)
Frame = -2 / -1
Query: 822 LTRYASAPRWSIASARFLDDELITVTWWPMAL 727
LT+ ASAPR S AS+RFL DELITVT P AL
Sbjct: 499 LTKNASAPRRSSASSRFLGDELITVTVIPNAL 404
>gb|CK125801.1|CK125801 BES1824110n12 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010N1210 5-PRIME, mRNA sequence
Length = 795
Score = 88.6 bits (187), Expect(3) = 2e-033
Identities = 33/58 (56%), Positives = 44/58 (75%)
Frame = +2 / +2
Query: 149 RKVVGWAARDATGHLSPYSYTLRNTGPEDVVVKVLYCGICHTDIHQAKNHLGASKYPM 322
+K VG AA DA+G LSP + T R+TG +DV++K+LYCGICH+D+H KN +KYPM
Sbjct: 164 KKAVGLAALDASGRLSPLAITRRSTGDDDVMIKILYCGICHSDLHSIKNDWKNAKYPM 337
Score = 66.1 bits (138), Expect(2) = 2e-012
Identities = 33/59 (55%), Positives = 37/59 (62%)
Frame = -1 / -3
Query: 409 PDAYHVADAVLGHFGPDLHHLADHLVPRDHRIL*SPEVVLGLVDVRVADPAVEHLHHHI 233
PD VA LGH DL LA LVPRDH +L VVL V VRVADPAV++L+H I
Sbjct: 424 PDTDTVAGLELGHVLADLGDLAGDLVPRDHGVLSVLPVVLDAVQVRVADPAVQNLYHDI 248
Score = 57.4 bits (119), Expect = 2e-007
Identities = 30/57 (52%), Positives = 32/57 (56%)
Frame = -2 / -1
Query: 321 IGYFEAPRWFLAWWMSVWQIPQ*STFTTTSSGPVFLRV*E*GERCPVASLAAHPTTF 151
+GY + FL S WQIPQ F TSS PV LRV GER P AS AA PT F
Sbjct: 336 MGYLAFFQSFLMLCRSEWQIPQYRIFIMTSSSPVLLRVMASGERRPEASSAARPTAF 166
Score = 57.4 bits (119), Expect(3) = 2e-033
Identities = 23/58 (39%), Positives = 32/58 (55%)
Frame = +2 / +2
Query: 425 CRECSPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASTMVVDQKFVVKIPAGLAPEQ 598
C+ C C E +C I++YN V DG T GG++S VV ++FVV+ P A Q
Sbjct: 440 CQSCESCDKGFENHCPGIIFTYNSVDRDGTVTHGGYSSMXVVHERFVVRFPGRHAAGQ 613
Score = 35.4 bits (71), Expect(3) = 2e-033
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = +2 / +3
Query: 593 EQAAPLLCAGVTVYSP 640
++ APLLCAG+TVYSP
Sbjct: 609 DKGAPLLCAGITVYSP 656
Score = 29.9 bits (59), Expect(2) = 2e-012
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = -2 / -3
Query: 639 GLYTVTPAHSSGAACS 592
GLYTV PAHS GA S
Sbjct: 655 GLYTVMPAHSRGAPLS 608
>gb|AL450716.1|AL450716 AL450716 Hordeum vulgare Barke etiolated leaves Hordeum vulgare
subsp. vulgare cDNA clone HK03O12u 5', mRNA sequence
Length = 500
Score = 87.7 bits (185), Expect(2) = 4e-033
Identities = 32/63 (50%), Positives = 44/63 (69%)
Frame = +2 / +2
Query: 134 SLASERKVVGWAARDATGHLSPYSYTLRNTGPEDVVVKVLYCGICHTDIHQAKNHLGASK 313
S+A +GWAA+D +G LSPYS++ R +DV +KVL+CGICHTD+H KN G +
Sbjct: 8 SMAKGMPAIGWAAKDTSGVLSPYSFSRRAQKDDDVTIKVLFCGICHTDLHIVKNEWGNAL 187
Query: 314 YPM 322
YP+
Sbjct: 188 YPV 196
Score = 74.8 bits (157), Expect(2) = 4e-033
Identities = 30/67 (44%), Positives = 42/67 (62%)
Frame = +2 / +2
Query: 425 CRECSPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASTMVVDQKFVVKIPAGLAPEQAA 604
CR C C + + +C + + + V DG TQGGF+ +VVD+ +VV++P GL AA
Sbjct: 299 CRSCVSCSSGHDNHCPTLVLTCSAVDYDGATTQGGFSDVLVVDKGYVVRVPEGLPLYGAA 478
Query: 605 PLLCAGV 625
PLLCAGV
Sbjct: 479 PLLCAGV 499
Score = 51.9 bits (107), Expect(2) = 4e-013
Identities = 27/48 (56%), Positives = 27/48 (56%)
Frame = -2 / -3
Query: 303 PRWFLAWWMSVWQIPQ*STFTTTSSGPVFLRV*E*GERCPVASLAAHP 160
P FL W SVWQIPQ ST TSS LR *GER P S AA P
Sbjct: 177 PHSFLTIWRSVWQIPQKSTLIVTSSSF*ALREKL*GERTPDVSFAAQP 34
Score = 46.0 bits (94), Expect(2) = 4e-013
Identities = 28/61 (45%), Positives = 33/61 (54%)
Frame = -2 / -3
Query: 624 TPAHSSGAACSGARPAGIFTTNFWSTTMVEANPPCVGRPSV*TSLYDQIFLLQYCSTLAL 445
TPA SSGAA RP+G TT STT NPP V PS T+L + + Q+ S L
Sbjct: 498 TPAQSSGAAPYRGRPSGTRTT*PLSTTSTSENPPWVVAPS*STALQVRTSVGQWLSCPLL 319
Query: 444 Q 442
Q
Sbjct: 318 Q 316
Score = 35.0 bits (70), Expect = 1.1
Identities = 14/21 (66%), Positives = 15/21 (71%)
Frame = +1 / +1
Query: 232 RCGGEGALLRDLPHGHPPGQE 294
RC +GALLRDLPH P QE
Sbjct: 106 RCDDQGALLRDLPHRPPYRQE 168
Score = 33.6 bits (67), Expect = 2.9
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = -1 / -2
Query: 343 DHLVPRDHRIL*SPEVVLGLVDVRVADPAVEHLHHHI 233
++L+P D + +VL ++V VADPA EHL HI
Sbjct: 217 NNLMPGDDGVEGVSPLVLDDMEVGVADPAEEHLDRHI 107
>gb|BF620007.2|BF620007 HVSMEc0009P20f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0009P20f, mRNA sequence
Length = 601
Score = 86.3 bits (182), Expect(2) = 1e-032
Identities = 33/67 (49%), Positives = 44/67 (65%)
Frame = +2 / +3
Query: 122 NRMGSLASERKVVGWAARDATGHLSPYSYTLRNTGPEDVVVKVLYCGICHTDIHQAKNHL 301
+ S+ +GWAARD +G LSPYS++ R EDV + VL+CGICHTD+H AKN
Sbjct: 45 SEQSSMDKGTPALGWAARDESGLLSPYSFSRRARKDEDVTINVLFCGICHTDLHIAKNEW 224
Query: 302 GASKYPM 322
G + YP+
Sbjct: 225 GNALYPI 245
Score = 74.4 bits (156), Expect(2) = 1e-032
Identities = 30/72 (41%), Positives = 40/72 (55%)
Frame = +2 / +3
Query: 425 CRECSPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASTMVVDQKFVVKIPAGLAPEQAA 604
CR C C E YC + + + V DG TQ GF+ +VV+Q +V+ +P L+ A
Sbjct: 348 CRSCGTCSKGYENYCCTLVLTCDGVDYDGSTTQRGFSDVLVVNQDYVLLVPESLSLTGAG 527
Query: 605 PLLCAGVTVYSP 640
PLLC G TVY P
Sbjct: 528 PLLCTGGTVYRP 563
Score = 41.4 bits (84), Expect(3) = 1e-008
Identities = 17/25 (68%), Positives = 17/25 (68%)
Frame = -2 / -1
Query: 303 PRWFLAWWMSVWQIPQ*STFTTTSS 229
P FLA W SVWQIPQ ST TSS
Sbjct: 226 PHSFLAMWRSVWQIPQKSTLIVTSS 152
Score = 37.3 bits (75), Expect(3) = 1e-008
Identities = 20/46 (43%), Positives = 22/46 (47%)
Frame = -2 / -1
Query: 642 SGLYTVTPAHSSGAACSGARPAGIFTTNFWSTTMVEANPPCVGRPS 505
SGLYTV P S+G A R +G T W TT P V PS
Sbjct: 565 SGLYTVPPVQSNGPAPVRDRLSGTRRT*SWLTTSTSEKPLWVVEPS 428
Score = 35.9 bits (72), Expect = 0.59
Identities = 17/38 (44%), Positives = 24/38 (63%)
Frame = -1 / -3
Query: 346 ADHLVPRDHRIL*SPEVVLGLVDVRVADPAVEHLHHHI 233
A +L+P + + +VLG V+V VADPA EH+ HI
Sbjct: 269 AHNLMPGNDGVEGVAPLVLGDVEVGVADPAEEHIDRHI 156
Score = 22.6 bits (43), Expect(3) = 1e-008
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = -2 / -1
Query: 201 *GERCPVASLAAHPT 157
*GER P +SLAA P+
Sbjct: 124 *GERRPDSSLAAQPS 80
>gb|AL509635.1|AL509635 AL509635 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY02G17u 3',
mRNA sequence
Length = 443
Score = 140 bits (300), Expect = 2e-032
Identities = 60/68 (88%), Positives = 64/68 (94%)
Frame = +2 / -2
Query: 989 VMLGRKAITGSFIGSIDETAEVLQFCVDKGLTSQIEVVKMGYVNEALERLERNDVRYRFV 1168
VMLGRK ITGSFIGS+DET EVL+ CVDKGLTSQIEVVKM YVN+ALERLERNDVRYRFV
Sbjct: 442 VMLGRKTITGSFIGSMDETEEVLKXCVDKGLTSQIEVVKMDYVNQALERLERNDVRYRFV 263
Query: 1169 VDVAGSNV 1192
VDVAGSN+
Sbjct: 262 VDVAGSNL 239
Score = 71.2 bits (149), Expect = 1e-011
Identities = 33/40 (82%), Positives = 34/40 (85%)
Frame = -2 / +3
Query: 1107 ILTTSIWEVSPLSTQN*STSAVSSMLPMKLPVMAFRPSIT 988
ILTTSI EVSPLST N TS+VSSMLPMKLPVM F PSIT
Sbjct: 324 ILTTSICEVSPLSTXNLRTSSVSSMLPMKLPVMVFLPSIT 443
Score = 65.7 bits (137), Expect = 6e-010
Identities = 30/51 (58%), Positives = 33/51 (64%)
Frame = -1 / +2
Query: 1141 LQPLQRXXXXXXXXXXXLGGEPLVDAELKHLSGLVDAADEAPRDGLPPQHH 989
L+PL+R L GEPLVDA L+ L LV A DEAPRDGLPPQHH
Sbjct: 290 LEPLERLVDVVHLDDLDLRGEPLVDAXLEDLLRLVHAPDEAPRDGLPPQHH 442
Score = 43.2 bits (88), Expect = 0.004
Identities = 18/27 (66%), Positives = 19/27 (70%)
Frame = +1 / -1
Query: 1027 RQHRRDR*GASVLRRQGAHLPDRGGQD 1107
R+H RD G V RRQGAHL DRG QD
Sbjct: 404 REHGRDGGGPQVXRRQGAHLADRGRQD 324
>gb|BJ447037.1|BJ447037 BJ447037 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak15m16 5', mRNA sequence
Length = 656
Score = 99.6 bits (211), Expect(3) = 9e-032
Identities = 35/81 (43%), Positives = 57/81 (70%)
Frame = +2 / +3
Query: 425 CRECSPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASTMVVDQKFVVKIPAGLAPEQAA 604
CR+C C + +E +C+K ++++N V TDG T+GG++S +VV +++ KIP G E+AA
Sbjct: 201 CRDCDNCNSFLENHCSKFVFTFNGVDTDGTVTKGGYSSHIVVHERYCYKIPDGYPLEKAA 380
Query: 605 PLLCAGVTVYSPLKHFGLTNP 667
PL+CAG+TVY+P+ + P
Sbjct: 381 PLVCAGITVYTPMTRHNMNQP 443
Score = 43.2 bits (88), Expect(3) = 9e-032
Identities = 20/51 (39%), Positives = 28/51 (54%)
Frame = +2 / +3
Query: 728 KAMGHHVTVISSSSKKRAEAMDHLGADAYLVXXXXXXXXXXXXXXXYIIDT 880
KA G VTV+S+S KR EA++ LGAD ++V +I+DT
Sbjct: 504 KAFGLKVTVLSTSESKRDEAINLLGADNFVVSSDKKQMESLKSSLDFIVDT 656
Score = 33.1 bits (66), Expect(3) = 9e-032
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +2 / +3
Query: 236 VVVKVLYCGICHTDIHQAKNHLGASKYPM 322
V +++ +CG+C+ D+ KN S YP+
Sbjct: 12 VSLRITHCGVCYADVIWTKNRHNDSVYPL 98
Score = 32.2 bits (64), Expect(3) = 0.013
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = -2 / -2
Query: 639 GLYTVTPAHSSGAACSGARPAGI 571
G+YTV PA + GAA S P+GI
Sbjct: 415 GVYTVIPAQTKGAAFSSG*PSGI 347
Score = 26.3 bits (51), Expect(3) = 0.013
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = -2 / -2
Query: 819 TRYASAPRWSIASARFLDDELITVTWWPMALATF 718
T SAPR IAS+ F L TVT+ P A F
Sbjct: 595 TTKLSAPRRLIASSLFDSLVLKTVTFSPKAFPNF 494
Score = 21.7 bits (41), Expect(3) = 0.013
Identities = 17/41 (41%), Positives = 19/41 (46%)
Frame = -2 / -2
Query: 549 TTMVEANPPCVGRPSV*TSLYDQIFLLQYCSTLALQGLHSR 427
TTM PP V PSV T L + Q+ S LQ SR
Sbjct: 325 TTM*LEYPPFVTVPSVSTPLKVKTNFEQWFSRKLLQLSQSR 203
>gb|AV926512.1|AV926512 AV926512 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd19k10 5', mRNA sequence
Length = 658
Score = 98.2 bits (208), Expect(2) = 1e-031
Identities = 34/73 (46%), Positives = 56/73 (76%)
Frame = +2 / +2
Query: 425 CRECSPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASTMVVDQKFVVKIPAGLAPEQAA 604
CR+C C +++E +C+K ++++N V TDG T+GG++S +VV +++ KIP G E+AA
Sbjct: 419 CRDCENCNSSLENHCSKFVFTFNGVDTDGTVTKGGYSSHIVVHERYCYKIPDGYPLEKAA 598
Query: 605 PLLCAGVTVYSPL 643
PL+CAG+TVY+P+
Sbjct: 599 PLVCAGITVYTPM 637
Score = 59.7 bits (124), Expect(2) = 1e-031
Identities = 20/53 (37%), Positives = 34/53 (64%)
Frame = +2 / +2
Query: 164 WAARDATGHLSPYSYTLRNTGPEDVVVKVLYCGICHTDIHQAKNHLGASKYPM 322
WAA+D +G LSP+++ R +DV +++ +CG+C+ D+ KN S YP+
Sbjct: 158 WAAKDPSGLLSPHTFNRRTVRHDDVSLRITHCGVCYADVIWTKNRHNDSVYPL 316
Score = 32.2 bits (64), Expect(3) = 0.006
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = -2 / -2
Query: 639 GLYTVTPAHSSGAACSGARPAGI 571
G+YTV PA + GAA S P+GI
Sbjct: 633 GVYTVIPAQTKGAAFSSG*PSGI 565
Score = 27.6 bits (54), Expect(3) = 0.006
Identities = 20/51 (39%), Positives = 22/51 (43%)
Frame = -2 / -2
Query: 318 GYFEAPRWFLAWWMSVWQIPQ*STFTTTSSGPVFLRV*E*GERCPVASLAA 166
GY E+ F S Q PQ TSS LR+ *GE P S AA
Sbjct: 312 GYTESLCLFFVQITSA*QTPQCVILKETSSCRTVLRLKV*GESSPEGSFAA 160
Score = 21.7 bits (41), Expect(3) = 0.006
Identities = 17/41 (41%), Positives = 19/41 (46%)
Frame = -2 / -2
Query: 549 TTMVEANPPCVGRPSV*TSLYDQIFLLQYCSTLALQGLHSR 427
TTM PP V PSV T L + Q+ S LQ SR
Sbjct: 543 TTM*LEYPPFVTVPSVSTPLKVKTNFEQWFSRELLQFSQSR 421
>gb|BJ465038.1|BJ465038 BJ465038 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags37c03 5', mRNA sequence
Length = 602
Score = 88.1 bits (186), Expect(2) = 2e-031
Identities = 32/57 (56%), Positives = 43/57 (75%)
Frame = +2 / +2
Query: 152 KVVGWAARDATGHLSPYSYTLRNTGPEDVVVKVLYCGICHTDIHQAKNHLGASKYPM 322
K VG AA +++GHLSP + T R+TG EDV +K+LYCGICH+D+H KN ++YPM
Sbjct: 32 KAVGLAALESSGHLSPLAITRRSTGAEDVAIKILYCGICHSDLHSIKNEWKNARYPM 202
Score = 72.1 bits (151), Expect(2) = 2e-031
Identities = 26/50 (52%), Positives = 37/50 (74%)
Frame = +2 / +2
Query: 518 TQGGFASTMVVDQKFVVKIPAGLAPEQAAPLLCAGVTVYSPLKHFGLTNP 667
T GG++S +VV ++FVV+ P + ++ APLLCAG+T YSP+KH GL P
Sbjct: 410 TYGGYSSMVVVKERFVVRFPEAMPLDKGAPLLCAGITXYSPMKHHGLNXP 559
Score = 60.6 bits (126), Expect(2) = 5e-016
Identities = 31/59 (52%), Positives = 36/59 (61%)
Frame = -1 / -2
Query: 409 PDAYHVADAVLGHFGPDLHHLADHLVPRDHRIL*SPEVVLGLVDVRVADPAVEHLHHHI 233
PDA+ VA GH L LA LVPRDHR+ +VL V VRVA PAVE+L+ HI
Sbjct: 289 PDAHAVAGREPGHLLAHLGDLAGDLVPRDHRVPSVFPLVLNAVQVRVAYPAVENLYRHI 113
Score = 54.2 bits (112), Expect = 2e-006
Identities = 29/55 (52%), Positives = 29/55 (52%)
Frame = -2 / -3
Query: 321 IGYFEAPRWFLAWWMSVWQIPQ*STFTTTSSGPVFLRV*E*GERCPVASLAAHPT 157
IGY FL S W IPQ* F TSS PV LRV GER P S AA PT
Sbjct: 201 IGYLAFFHSFLMLCRSEWHIPQ*RIFIATSSAPVLLRVMARGERWPELSSAARPT 37
Score = 47.3 bits (97), Expect(2) = 5e-016
Identities = 23/48 (47%), Positives = 26/48 (54%)
Frame = -2 / -3
Query: 666 GFVSPKCFSGLYTVTPAHSSGAACSGARPAGIFTTNFWSTTMVEANPP 523
G +SP CF GLY V PA SSGA S +G TT TT + PP
Sbjct: 558 GMLSPWCFMGLYXVMPAQSSGAPLSSGMASGNRTTKRSFTTTMLE*PP 415
>gb|BG344700.2|BG344700 HVSMEg0015E05f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0015E05f, mRNA sequence
Length = 869
Score = 85.8 bits (181), Expect(3) = 2e-031
Identities = 32/58 (55%), Positives = 43/58 (74%)
Frame = +2 / +2
Query: 149 RKVVGWAARDATGHLSPYSYTLRNTGPEDVVVKVLYCGICHTDIHQAKNHLGASKYPM 322
+K VG AA DA+G L P + T R+TG +DV++K+LYCGICH+D+H KN +KYPM
Sbjct: 134 KKAVGLAALDASGRLFPLAITRRSTGDDDVMIKILYCGICHSDLHSIKNDWKNAKYPM 307
Score = 66.1 bits (138), Expect(2) = 6e-014
Identities = 33/59 (55%), Positives = 37/59 (62%)
Frame = -1 / -2
Query: 409 PDAYHVADAVLGHFGPDLHHLADHLVPRDHRIL*SPEVVLGLVDVRVADPAVEHLHHHI 233
PD VA LGH DL LA LVPRDH +L VVL V VRVADPAV++L+H I
Sbjct: 394 PDTDTVAGLELGHVLADLGDLAGDLVPRDHGVLSVLPVVLDAVQVRVADPAVQNLYHDI 218
Score = 55.6 bits (115), Expect = 7e-007
Identities = 29/57 (50%), Positives = 32/57 (56%)
Frame = -2 / -3
Query: 321 IGYFEAPRWFLAWWMSVWQIPQ*STFTTTSSGPVFLRV*E*GERCPVASLAAHPTTF 151
+GY + FL S WQIPQ F TSS PV LRV G+R P AS AA PT F
Sbjct: 306 MGYLAFFQSFLMLCRSEWQIPQYRIFIMTSSSPVLLRVMASGKRRPEASSAARPTAF 136
Score = 46.4 bits (95), Expect(3) = 2e-031
Identities = 18/49 (36%), Positives = 28/49 (57%)
Frame = +2 / +2
Query: 425 CRECSPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASTMVVDQKFVVK 571
C+ C C E +C I++Y V D T GG++S +VV ++FVV+
Sbjct: 410 CQSCESCDKGFENHCPGIIFTYKLVDRDRTVTHGGYSSMVVVHERFVVR 556
Score = 42.3 bits (86), Expect(3) = 2e-031
Identities = 16/31 (51%), Positives = 22/31 (70%)
Frame = +2 / +3
Query: 575 PAGLAPEQAAPLLCAGVTVYSPLKHFGLTNP 667
P + ++ APLLCA +TVYSP+K+ G T P
Sbjct: 561 PDAMPADKGAPLLCARITVYSPMKYTG*TVP 653
Score = 35.4 bits (71), Expect(2) = 6e-014
Identities = 16/31 (51%), Positives = 17/31 (54%)
Frame = -2 / -2
Query: 666 GFVSPKCFSGLYTVTPAHSSGAACSGARPAG 574
G V P F GLYTV AHS GA S +G
Sbjct: 652 GTVQPVYFMGLYTVMRAHSRGAPLSAGMASG 560
>gb|AV916085.1|AV916085 AV916085 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags1g09 5', mRNA sequence
Length = 616
Score = 93.2 bits (197), Expect(2) = 5e-031
Identities = 38/77 (49%), Positives = 55/77 (71%)
Frame = +2 / +2
Query: 962 EPLSFVSPMVMLGRKAITGSFIGSIDETAEVLQFCVDKGLTSQIEVVKMGYVNEALERLE 1141
EPL+ + ++ G K + G+ +GS+ + +L F G+T+ +EVVKM YVN A+ERLE
Sbjct: 278 EPLALPAYAIIGGGKRLAGNGVGSVRDCQAMLDFAGKHGITADVEVVKMDYVNTAVERLE 457
Query: 1142 RNDVRYRFVVDVAGSNV 1192
+NDVRYRFV+DVAGS +
Sbjct: 458 KNDVRYRFVIDVAGSQL 508
Score = 62.5 bits (130), Expect(2) = 5e-031
Identities = 30/60 (50%), Positives = 34/60 (56%)
Frame = +2 / +2
Query: 728 KAMGHHVTVISSSSKKRAEAMDHLGADAYLVXXXXXXXXXXXXXXXYIIDTVPVHHPLEP 907
KA G VTVISSS +KR EA++ LGADA+LV IIDTV HPL P
Sbjct: 44 KAFGMTVTVISSSPRKREEALERLGADAFLVSQDAEQMKAAAGTMDGIIDTVSAGHPLVP 223
Score = 46.4 bits (95), Expect = 4e-004
Identities = 23/32 (71%), Positives = 25/32 (78%)
Frame = -2 / -2
Query: 822 LTRYASAPRWSIASARFLDDELITVTWWPMAL 727
LT+ ASAPR S AS+RFL DELITVT P AL
Sbjct: 138 LTKNASAPRRSSASSRFLGDELITVTVIPNAL 43
>gb|AL504577.1|AL504577 AL504577 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW05L10V 5', mRNA sequence
Length = 530
Score = 98.7 bits (209), Expect(2) = 9e-031
Identities = 37/78 (47%), Positives = 53/78 (67%)
Frame = +2 / +2
Query: 425 CRECSPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASTMVVDQKFVVKIPAGLAPEQAA 604
C +C C ++ E YC+K +YN V+ DG T GG++S V ++FVV+IP L + AA
Sbjct: 20 CLDCEQCDSSQENYCDKVALTYNGVFWDGSITYGGYSSMYVAHKRFVVRIPDSLPLDAAA 199
Query: 605 PLLCAGVTVYSPLKHFGL 658
PLLCAG+TVY+P+K G+
Sbjct: 200 PLLCAGITVYTPMKKHGM 253
Score = 56.1 bits (116), Expect(2) = 9e-031
Identities = 25/60 (41%), Positives = 32/60 (53%)
Frame = +2 / +2
Query: 728 KAMGHHVTVISSSSKKRAEAMDHLGADAYLVXXXXXXXXXXXXXXXYIIDTVPVHHPLEP 907
KA G HVTVIS+S K EA ++L AD +++ Y+IDTVP H L P
Sbjct: 326 KAFGLHVTVISTSPAKEQEARENLKADDFIISTDDKQMQAMARKLDYVIDTVPAAHSLGP 505
Score = 55.6 bits (115), Expect(2) = 3e-007
Identities = 29/55 (52%), Positives = 32/55 (58%)
Frame = -2 / -3
Query: 654 PKCFSGLYTVTPAHSSGAACSGARPAGIFTTNFWSTTMVEANPPCVGRPSV*TSL 490
P F G+YTV PAHSSGAA S R +GI TTN T + PP V PS T L
Sbjct: 249 PCFFIGVYTVIPAHSSGAAASSGRLSGIRTTNLLCATYMLE*PP*VMLPSQKTPL 85
Score = 22.6 bits (43), Expect(2) = 3e-007
Identities = 9/19 (47%), Positives = 10/19 (52%)
Frame = -3 / -1
Query: 308 KPRGGSWPGGCPCGRSRSR 252
+P S PG C RSR R
Sbjct: 74 RPCRSSSPGSCRTARSRGR 18
>gb|AL507629.1|AL507629 AL507629 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY06G08V 5',
mRNA sequence
Length = 365
Score = 133 bits (286), Expect = 2e-030
Identities = 52/61 (85%), Positives = 54/61 (88%)
Frame = +2 / +1
Query: 140 ASERKVVGWAARDATGHLSPYSYTLRNTGPEDVVVKVLYCGICHTDIHQAKNHLGASKYP 319
ASE V GWAARDATGHLSPY+YTLR TGPEDVV+KV YCGICHTDIHQ KN LGASKYP
Sbjct: 85 ASETTVTGWAARDATGHLSPYTYTLRKTGPEDVVLKVKYCGICHTDIHQVKNDLGASKYP 264
Query: 320 M 322
M
Sbjct: 265 M 267
Score = 107 bits (229), Expect = 1e-022
Identities = 45/61 (73%), Positives = 49/61 (80%)
Frame = -2 / -1
Query: 321 IGYFEAPRWFLAWWMSVWQIPQ*STFTTTSSGPVFLRV*E*GERCPVASLAAHPTTFLSD 142
+GY EAPR FL WWMSVWQ+PQ TF TTSSGPVFLRV *G R PVASLAAHP T +S+
Sbjct: 266 MGYLEAPRSFLTWWMSVWQMPQYLTFNTTSSGPVFLRVYV*GXRWPVASLAAHPVTVVSE 87
Query: 141 A 139
A
Sbjct: 86 A 84
Score = 107 bits (229), Expect = 1e-022
Identities = 46/66 (69%), Positives = 51/66 (77%)
Frame = -1 / -3
Query: 418 NDHPDAYHVADAVLGHFGPDLHHLADHLVPRDHRIL*SPEVVLGLVDVRVADPAVEHLHH 239
+DHP A HVA AVL H PDLHHLA HL+P DH IL S +VVL LVDVRVA+ AV +L H
Sbjct: 363 HDHPHADHVAXAVLAHLRPDLHHLAXHLMPWDHGILGSTQVVLDLVDVRVANAAVFNLQH 184
Query: 238 HIFRAC 221
HIFRAC
Sbjct: 183 HIFRAC 166
Score = 70.3 bits (147), Expect = 3e-011
Identities = 28/39 (71%), Positives = 32/39 (82%)
Frame = +1 / +3
Query: 217 EHRP*RCGGEGALLRDLPHGHPPGQEPPRGFKVSYGPWA 333
E+RP*RCG EG +LR LPHGHPPGQE P F+VS+GP A
Sbjct: 162 ENRP*RCGVEG*ILRHLPHGHPPGQERPGCFQVSHGPRA 278
Score = 58.8 bits (122), Expect = 8e-008
Identities = 25/37 (67%), Positives = 26/37 (70%)
Frame = -3 / -2
Query: 332 AQGP*DTLKPRGGSWPGGCPCGRSRSRAPSPPHLQGL 222
A GP DT K G S PGGCPCG+ RS PS PHLQGL
Sbjct: 277 ALGPWDTWKHPGRS*PGGCPCGKCRSI*PSTPHLQGL 167
Score = 53.8 bits (111), Expect = 2e-006
Identities = 22/48 (45%), Positives = 22/48 (45%)
Frame = +3 / +2
Query: 222 QALKMWW*XXXXXXXXXXXXXXXXXXXXLQSILWSLGTRWSARWWRSG 365
QALKMW * L SI WS G RW ARWWRSG
Sbjct: 167 QALKMWC*RLNTAAFATRTSTRSRTTWVLPSIPWSQGMRWXARWWRSG 310
>gb|BI951294.1|BI951294 HVSMEl0025G15f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0025G15f, mRNA sequence
Length = 837
Score = 133 bits (286), Expect = 2e-030
Identities = 52/61 (85%), Positives = 54/61 (88%)
Frame = +2 / +2
Query: 140 ASERKVVGWAARDATGHLSPYSYTLRNTGPEDVVVKVLYCGICHTDIHQAKNHLGASKYP 319
ASE V GWAARDATGHLSPY+YTLR TGPEDVV+KV YCGICHTDIHQ KN LGASKYP
Sbjct: 74 ASETTVTGWAARDATGHLSPYTYTLRKTGPEDVVLKVKYCGICHTDIHQVKNDLGASKYP 253
Query: 320 M 322
M
Sbjct: 254 M 256
Score = 110 bits (235), Expect = 2e-023
Identities = 46/61 (75%), Positives = 50/61 (81%)
Frame = -2 / -1
Query: 321 IGYFEAPRWFLAWWMSVWQIPQ*STFTTTSSGPVFLRV*E*GERCPVASLAAHPTTFLSD 142
+GY EAPR FL WWMSVWQ+PQ TF TTSSGPVFLRV *GER PVASLAAHP T +S+
Sbjct: 255 MGYLEAPRSFLTWWMSVWQMPQYLTFNTTSSGPVFLRVYV*GERWPVASLAAHPVTVVSE 76
Query: 141 A 139
A
Sbjct: 75 A 73
Score = 110 bits (234), Expect = 3e-023
Identities = 47/67 (70%), Positives = 52/67 (77%)
Frame = -1 / -3
Query: 421 PNDHPDAYHVADAVLGHFGPDLHHLADHLVPRDHRIL*SPEVVLGLVDVRVADPAVEHLH 242
P HP A HVADAVL H PDLHHLA+HL+P DH IL S +VVL LVDVRVA+ AV +L
Sbjct: 355 PEVHPHADHVADAVLDHLRPDLHHLANHLMPWDHGILGSTQVVLDLVDVRVANAAVFNLQ 176
Query: 241 HHIFRAC 221
HHIFRAC
Sbjct: 175 HHIFRAC 155
Score = 72.5 bits (152), Expect = 5e-012
Identities = 29/40 (72%), Positives = 33/40 (82%)
Frame = +1 / +1
Query: 214 QEHRP*RCGGEGALLRDLPHGHPPGQEPPRGFKVSYGPWA 333
QE+RP*RCG EG +LR LPHGHPPGQE P F+VS+GP A
Sbjct: 148 QENRP*RCGVEG*ILRHLPHGHPPGQERPGCFQVSHGPRA 267
Score = 58.8 bits (122), Expect = 8e-008
Identities = 25/37 (67%), Positives = 26/37 (70%)
Frame = -3 / -2
Query: 332 AQGP*DTLKPRGGSWPGGCPCGRSRSRAPSPPHLQGL 222
A GP DT K G S PGGCPCG+ RS PS PHLQGL
Sbjct: 266 ALGPWDTWKHPGRS*PGGCPCGKCRSI*PSTPHLQGL 156
Score = 52.8 bits (109), Expect = 5e-006
Identities = 22/48 (45%), Positives = 22/48 (45%)
Frame = +3 / +3
Query: 222 QALKMWW*XXXXXXXXXXXXXXXXXXXXLQSILWSLGTRWSARWWRSG 365
QALKMW * L SI WS G RW ARWWRSG
Sbjct: 156 QALKMWC*RLNTAAFATRTSTRSRTTWVLPSIPWSQGMRWLARWWRSG 299
>gb|BM096821.2|BM096821 EBma07_SQ001_M10_R maternal, 21 DPA, no treatment, cv Optic, EBma07
Hordeum vulgare subsp. vulgare cDNA clone
EBma07_SQ001_M10 5', mRNA sequence
Length = 252
Score = 133 bits (286), Expect = 2e-030
Identities = 52/61 (85%), Positives = 54/61 (88%)
Frame = +2 / +2
Query: 140 ASERKVVGWAARDATGHLSPYSYTLRNTGPEDVVVKVLYCGICHTDIHQAKNHLGASKYP 319
ASE V GWAARDATGHLSPY+YTLR TGPEDVV+KV YCGICHTDIHQ KN LGASKYP
Sbjct: 65 ASETTVTGWAARDATGHLSPYTYTLRKTGPEDVVLKVKYCGICHTDIHQVKNDLGASKYP 244
Query: 320 M 322
M
Sbjct: 245 M 247
Score = 110 bits (235), Expect = 2e-023
Identities = 46/61 (75%), Positives = 50/61 (81%)
Frame = -2 / -1
Query: 321 IGYFEAPRWFLAWWMSVWQIPQ*STFTTTSSGPVFLRV*E*GERCPVASLAAHPTTFLSD 142
+GY EAPR FL WWMSVWQ+PQ TF TTSSGPVFLRV *GER PVASLAAHP T +S+
Sbjct: 246 MGYLEAPRSFLTWWMSVWQMPQYLTFNTTSSGPVFLRVYV*GERWPVASLAAHPVTVVSE 67
Query: 141 A 139
A
Sbjct: 66 A 64
Score = 72.1 bits (151), Expect = 8e-012
Identities = 28/38 (73%), Positives = 32/38 (84%)
Frame = +1 / +1
Query: 214 QEHRP*RCGGEGALLRDLPHGHPPGQEPPRGFKVSYGP 327
QE+RP*RCG EG +LR LPHGHPPGQE P F+VS+GP
Sbjct: 139 QENRP*RCGVEG*ILRHLPHGHPPGQERPGCFQVSHGP 252
Score = 57.9 bits (120), Expect = 1e-007
Identities = 24/35 (68%), Positives = 25/35 (71%)
Frame = -3 / -2
Query: 326 GP*DTLKPRGGSWPGGCPCGRSRSRAPSPPHLQGL 222
GP DT K G S PGGCPCG+ RS PS PHLQGL
Sbjct: 251 GPWDTWKHPGRS*PGGCPCGKCRSI*PSTPHLQGL 147
Score = 56.5 bits (117), Expect = 4e-007
Identities = 25/35 (71%), Positives = 28/35 (80%)
Frame = -1 / -3
Query: 325 DHRIL*SPEVVLGLVDVRVADPAVEHLHHHIFRAC 221
DH IL S +VVL LVDVRVA+ AV +L HHIFRAC
Sbjct: 250 DHGILGSTQVVLDLVDVRVANAAVFNLQHHIFRAC 146
>gb|BQ763215.1|BQ763215 EBro02_SQ007_H14_R root, 3 week, hydroponic grown, low nitrogen, cv
Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone
EBro02_SQ007_H14 5', mRNA sequence
Length = 279
Score = 132 bits (283), Expect = 5e-030
Identities = 51/61 (83%), Positives = 54/61 (88%)
Frame = +2 / +2
Query: 140 ASERKVVGWAARDATGHLSPYSYTLRNTGPEDVVVKVLYCGICHTDIHQAKNHLGASKYP 319
ASE V GWAARDATGHLSPY+YTL+ TGPEDVV+KV YCGICHTDIHQ KN LGASKYP
Sbjct: 74 ASETTVTGWAARDATGHLSPYTYTLKKTGPEDVVLKVKYCGICHTDIHQVKNDLGASKYP 253
Query: 320 M 322
M
Sbjct: 254 M 256
Score = 110 bits (235), Expect = 2e-023
Identities = 46/61 (75%), Positives = 50/61 (81%)
Frame = -2 / -1
Query: 321 IGYFEAPRWFLAWWMSVWQIPQ*STFTTTSSGPVFLRV*E*GERCPVASLAAHPTTFLSD 142
+GY EAPR FL WWMSVWQ+PQ TF TTSSGPVFLRV *GER PVASLAAHP T +S+
Sbjct: 255 MGYLEAPRSFLTWWMSVWQMPQYLTFNTTSSGPVFLRVYV*GERWPVASLAAHPVTVVSE 76
Query: 141 A 139
A
Sbjct: 75 A 73
Score = 67.0 bits (140), Expect = 2e-010
Identities = 27/40 (67%), Positives = 32/40 (80%)
Frame = +1 / +1
Query: 214 QEHRP*RCGGEGALLRDLPHGHPPGQEPPRGFKVSYGPWA 333
QE+RP*RCG E +LR LP+GHPPGQE P F+VS+GP A
Sbjct: 148 QENRP*RCGVES*ILRHLPYGHPPGQERPGCFQVSHGPRA 267
Score = 59.7 bits (124), Expect = 4e-008
Identities = 25/41 (60%), Positives = 31/41 (75%)
Frame = -1 / -3
Query: 343 DHLVPRDHRIL*SPEVVLGLVDVRVADPAVEHLHHHIFRAC 221
+H +P DH IL S +VVL LVDVR+A+ AV + HHIFRAC
Sbjct: 277 NHFMPWDHGILGSTQVVLDLVDVRMANAAVFNFQHHIFRAC 155
Score = 49.2 bits (101), Expect = 6e-005
Identities = 23/37 (62%), Positives = 24/37 (64%)
Frame = -3 / -2
Query: 332 AQGP*DTLKPRGGSWPGGCPCGRSRSRAPSPPHLQGL 222
A GP DT K G S PGGCP G+ RS S PHLQGL
Sbjct: 266 ALGPWDTWKHPGRS*PGGCPYGKCRSI*LSTPHLQGL 156
>gb|AV931399.1|AV931399 AV931399 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp. vulgare
cDNA clone basd19k10 3', mRNA sequence
Length = 683
Score = 74.8 bits (157), Expect(3) = 5e-030
Identities = 28/64 (43%), Positives = 42/64 (65%)
Frame = +2 / -2
Query: 995 LGRKAITGSFIGSIDETAEVLQFCVDKGLTSQIEVVKMGYVNEALERLERNDVRYRFVVD 1174
LG + ++GS G +T E++ FC + IE++K+ Y+NEALERL DV+YRFV+D
Sbjct: 274 LGARTLSGSVTGGTKDTQEMINFCAVNKIYPDIELIKIDYINEALERLVNRDVKYRFVID 95
Query: 1175 VAGS 1186
+ S
Sbjct: 94 IESS 83
Score = 55.1 bits (114), Expect(3) = 5e-030
Identities = 24/61 (39%), Positives = 33/61 (54%)
Frame = +2 / -2
Query: 728 KAMGHHVTVISSSSKKRAEAMDHLGADAYLVXXXXXXXXXXXXXXXYIIDTVPVHHPLEP 907
KA G VTV+S+S KR EA++ LGAD ++V +I+DT HP +P
Sbjct: 538 KAFGLKVTVLSTSESKRDEAINLLGADNFVVSSDKKQMESLKSSLDFIVDTASGDHPFDP 359
Query: 908 Y 910
Y
Sbjct: 358 Y 356
Score = 40.0 bits (81), Expect(3) = 5e-030
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = +2 / -2
Query: 593 EQAAPLLCAGVTVYSPLKHFGLTNP 667
E+AAPL+CAG+TVY+P+ + P
Sbjct: 673 EKAAPLVCAGITVYTPMTRHNMNQP 599
Score = 26.3 bits (51), Expect(2) = 1.3
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = -2 / +3
Query: 819 TRYASAPRWSIASARFLDDELITVTWWPMALATF 718
T SAPR IAS+ F L TVT+ P A F
Sbjct: 447 TTKLSAPRRLIASSLFDSLVLKTVTFSPKAFPNF 548
Score = 25.8 bits (50), Expect(2) = 1.3
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -2 / +3
Query: 639 GLYTVTPAHSSGAACS 592
G+YTV PA + GAA S
Sbjct: 627 GVYTVIPAQTKGAAFS 674
>gb|BF617661.3|BF617661 HVSMEc0018J01f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0018J01f, mRNA sequence
Length = 707
Score = 93.2 bits (197), Expect(3) = 3e-028
Identities = 41/62 (66%), Positives = 46/62 (74%)
Frame = -1 / -3
Query: 421 PNDHPDAYHVADAVLGHFGPDLHHLADHLVPRDHRIL*SPEVVLGLVDVRVADPAVEHLH 242
P P A HVADAVL H PDLHHLA+HL+P DH IL S +VVL LVDVRVA+ AV +L
Sbjct: 204 PTITPHADHVADAVLAHLRPDLHHLANHLMPWDHGILGSTQVVLDLVDVRVANAAVFNLQ 25
Query: 241 HH 236
HH
Sbjct: 24 HH 19
Score = 67.0 bits (140), Expect(3) = 2e-029
Identities = 26/32 (81%), Positives = 27/32 (84%)
Frame = +2 / +1
Query: 227 PEDVVVKVLYCGICHTDIHQAKNHLGASKYPM 322
P VV+KV YCGICHTDIHQ KN LGASKYPM
Sbjct: 10 P*RVVLKVKYCGICHTDIHQVKNDLGASKYPM 105
Score = 60.2 bits (125), Expect = 3e-008
Identities = 22/32 (68%), Positives = 24/32 (75%)
Frame = -2 / -1
Query: 321 IGYFEAPRWFLAWWMSVWQIPQ*STFTTTSSG 226
+GY EAPR FL WWMSVWQ+PQ TF TT G
Sbjct: 104 MGYLEAPRSFLTWWMSVWQMPQYLTFNTTLQG 9
Score = 58.3 bits (121), Expect(3) = 2e-029
Identities = 19/23 (82%), Positives = 19/23 (82%)
Frame = +2 / +3
Query: 422 CCRECSPCKANVEQYCNKKIWSY 490
CCR C PCKANVEQYC KKIW Y
Sbjct: 207 CCRNCRPCKANVEQYCTKKIWWY 275
Score = 55.6 bits (115), Expect(2) = 1e-011
Identities = 22/34 (64%), Positives = 26/34 (76%)
Frame = +1 / +3
Query: 232 RCGGEGALLRDLPHGHPPGQEPPRGFKVSYGPWA 333
+ G EG +LR LPHGHPPGQE P F+VS+GP A
Sbjct: 15 KSGVEG*ILRHLPHGHPPGQERPGCFQVSHGPRA 116
Score = 46.4 bits (95), Expect = 4e-004
Identities = 20/32 (62%), Positives = 21/32 (65%)
Frame = -3 / -2
Query: 332 AQGP*DTLKPRGGSWPGGCPCGRSRSRAPSPP 237
A GP DT K G S PGGCPCG+ RS PS P
Sbjct: 115 ALGPWDTWKHPGRS*PGGCPCGKCRSI*PSTP 20
Score = 42.3 bits (86), Expect(3) = 2e-029
Identities = 15/20 (75%), Positives = 15/20 (75%)
Frame = +3 / +2
Query: 306 LQSILWSLGTRWSARWWRSG 365
L SI WS G RW ARWWRSG
Sbjct: 89 LPSIPWSQGMRWLARWWRSG 148
Score = 41.8 bits (85), Expect(3) = 3e-028
Identities = 16/24 (66%), Positives = 18/24 (75%)
Frame = -2 / -2
Query: 492 LYDQIFLLQYCSTLALQGLHSRQH 421
+Y QIFL+QYCST AL G RQH
Sbjct: 277 VYHQIFLVQYCSTFALHGRQLRQH 206
Score = 34.5 bits (69), Expect(2) = 1e-011
Identities = 14/23 (60%), Positives = 19/23 (82%)
Frame = +1 / +2
Query: 421 VLPRVQPLQGQR*AVLQQEDLVI 489
VLP++ +QG+R AVL QEDLV+
Sbjct: 206 VLPQLPAVQGERRAVLHQEDLVV 274
Score = 29.0 bits (57), Expect(3) = 3e-028
Identities = 14/28 (50%), Positives = 15/28 (53%)
Frame = -2 / -3
Query: 576 GIFTTNFWSTTMVEANPPCVGRPSV*TS 493
G F NF+STTM E PSV* S
Sbjct: 360 GFFPQNFYSTTMAEGETALGRPPSV*RS 277
>gb|BF623988.2|BF623988 HVSMEa0008F16f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0008F16f, mRNA sequence
Length = 507
Score = 89.0 bits (188), Expect(2) = 3e-029
Identities = 34/67 (50%), Positives = 45/67 (67%)
Frame = +2 / +3
Query: 122 NRMGSLASERKVVGWAARDATGHLSPYSYTLRNTGPEDVVVKVLYCGICHTDIHQAKNHL 301
+ S+ +GWAARD +G LSPYS++ R EDV +KVL+CGICHTD+H AKN
Sbjct: 45 SEQSSMEKGTPALGWAARDESGLLSPYSFSRRARKDEDVTIKVLFCGICHTDLHIAKNEW 224
Query: 302 GASKYPM 322
G + YP+
Sbjct: 225 GNALYPI 245
Score = 60.6 bits (126), Expect(2) = 3e-029
Identities = 21/51 (41%), Positives = 31/51 (60%)
Frame = +2 / +3
Query: 425 CRECSPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASTMVVDQKFVVKIP 577
CR C C E YC+ + + N V DG TQGGF+ +VV+Q +V+++P
Sbjct: 348 CRSCGTCSKGYENYCSTLVLTSNGVDYDGATTQGGFSDVLVVNQDYVLRVP 500
Score = 41.4 bits (84), Expect(3) = 2e-006
Identities = 17/25 (68%), Positives = 17/25 (68%)
Frame = -2 / -3
Query: 303 PRWFLAWWMSVWQIPQ*STFTTTSS 229
P FLA W SVWQIPQ ST TSS
Sbjct: 226 PHSFLAMWRSVWQIPQKSTLIVTSS 152
Score = 38.6 bits (78), Expect = 0.088
Identities = 23/62 (37%), Positives = 32/62 (51%)
Frame = -1 / -2
Query: 418 NDHPDAYHVADAVLGHFGPDLHHLADHLVPRDHRIL*SPEVVLGLVDVRVADPAVEHLHH 239
N+ A+ V D D+ A +L+P + + +VLG V+V VADPA EHL
Sbjct: 341 NEVAHAHRVPDLEALDARADVGDDAHNLMPGNDGVEGVAPLVLGDVEVGVADPAEEHLDR 162
Query: 238 HI 233
HI
Sbjct: 161 HI 156
Score = 33.1 bits (66), Expect = 4.0
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = +1 / +2
Query: 235 CGGEGALLRDLPHGHPPGQE 294
C +GALLRDLPH P QE
Sbjct: 158 CDDQGALLRDLPHRPPHRQE 217
Score = 24.9 bits (48), Expect(3) = 2e-006
Identities = 19/52 (36%), Positives = 21/52 (40%)
Frame = -2 / -3
Query: 579 AGIFTTNFWSTTMVEANPPCVGRPSV*TSLYDQIFLLQYCSTLALQGLHSRQ 424
+G T W TT PP V PS T L + Q S LQ H RQ
Sbjct: 502 SGTRRT*SWLTTSTSEKPPWVVAPS*STPLEVSTRVEQ*FSYPLLQVPHERQ 347
Score = 22.6 bits (43), Expect(3) = 2e-006
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = -2 / -3
Query: 201 *GERCPVASLAAHPT 157
*GER P +SLAA P+
Sbjct: 124 *GERRPDSSLAAQPS 80
>gb|BF257150.3|BF257150 HVSMEf0012A06f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEf0012A06f, mRNA sequence
Length = 852
Score = 86.3 bits (182), Expect(2) = 5e-029
Identities = 36/74 (48%), Positives = 52/74 (70%)
Frame = +2 / +2
Query: 962 EPLSFVSPMVMLGRKAITGSFIGSIDETAEVLQFCVDKGLTSQIEVVKMGYVNEALERLE 1141
EPL+ + ++ G K + G+ +GS+ + +L F G+T+ +EVVKM YVN A+ERLE
Sbjct: 263 EPLALPAYAIIGGGKRLAGNGVGSVRDCQAMLDFAGKHGITADVEVVKMDYVNTAVERLE 442
Query: 1142 RNDVRYRFVVDVAG 1183
+NDVR RFV+DVAG
Sbjct: 443 KNDVRDRFVIDVAG 484
Score = 62.5 bits (130), Expect(2) = 5e-029
Identities = 30/60 (50%), Positives = 34/60 (56%)
Frame = +2 / +2
Query: 728 KAMGHHVTVISSSSKKRAEAMDHLGADAYLVXXXXXXXXXXXXXXXYIIDTVPVHHPLEP 907
KA G VTVISSS +KR EA++ LGADA+LV IIDTV HPL P
Sbjct: 29 KAFGMTVTVISSSPRKREEALERLGADAFLVSQDAEQMKAAAGTMDGIIDTVSAGHPLVP 208
Score = 46.4 bits (95), Expect = 4e-004
Identities = 23/32 (71%), Positives = 25/32 (78%)
Frame = -2 / -1
Query: 822 LTRYASAPRWSIASARFLDDELITVTWWPMAL 727
LT+ ASAPR S AS+RFL DELITVT P AL
Sbjct: 123 LTKNASAPRRSSASSRFLGDELITVTVIPNAL 28
>gb|BJ449238.1|BJ449238 BJ449238 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak23a07 5', mRNA sequence
Length = 573
Score = 99.6 bits (211), Expect(3) = 1e-028
Identities = 35/81 (43%), Positives = 57/81 (70%)
Frame = +2 / +2
Query: 425 CRECSPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASTMVVDQKFVVKIPAGLAPEQAA 604
CR+C C + +E +C+K ++++N V TDG T+GG++S +VV +++ KIP G E+AA
Sbjct: 191 CRDCDNCNSFLENHCSKFVFTFNGVDTDGTVTKGGYSSHIVVHERYCYKIPDGYPLEKAA 370
Query: 605 PLLCAGVTVYSPLKHFGLTNP 667
PL+CAG+TVY+P+ + P
Sbjct: 371 PLVCAGITVYTPMTRHNMNQP 433
Score = 33.1 bits (66), Expect(3) = 1e-028
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +2 / +2
Query: 236 VVVKVLYCGICHTDIHQAKNHLGASKYPM 322
V +++ +CG+C+ D+ KN S YP+
Sbjct: 2 VSLRITHCGVCYADVIWTKNRHNDSVYPL 88
Score = 32.7 bits (65), Expect(3) = 1e-028
Identities = 15/26 (57%), Positives = 19/26 (73%)
Frame = +2 / +2
Query: 728 KAMGHHVTVISSSSKKRAEAMDHLGA 805
KA G VTV+S+S KR EA++ LGA
Sbjct: 494 KAFGLKVTVLSTSESKRDEAINLLGA 571
Score = 32.2 bits (64), Expect(3) = 0.014
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = -2 / -1
Query: 639 GLYTVTPAHSSGAACSGARPAGI 571
G+YTV PA + GAA S P+GI
Sbjct: 405 GVYTVIPAQTKGAAFSSG*PSGI 337
Score = 25.8 bits (50), Expect(3) = 0.014
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = -2 / -1
Query: 807 SAPRWSIASARFLDDELITVTWWPMALATF 718
SAPR IAS+ F L TVT+ P A F
Sbjct: 573 SAPRRLIASSLFDSLVLKTVTFSPKAFPNF 484
Score = 21.7 bits (41), Expect(3) = 0.014
Identities = 17/41 (41%), Positives = 19/41 (46%)
Frame = -2 / -1
Query: 549 TTMVEANPPCVGRPSV*TSLYDQIFLLQYCSTLALQGLHSR 427
TTM PP V PSV T L + Q+ S LQ SR
Sbjct: 315 TTM*LEYPPFVTVPSVSTPLKVKTNFEQWFSRKLLQLSQSR 193
>gb|BI958905.1|BI958905 HVSMEn0017C09f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0017C09f, mRNA sequence
Length = 670
Score = 88.6 bits (187), Expect(2) = 2e-028
Identities = 33/58 (56%), Positives = 44/58 (75%)
Frame = +2 / +2
Query: 149 RKVVGWAARDATGHLSPYSYTLRNTGPEDVVVKVLYCGICHTDIHQAKNHLGASKYPM 322
+K VG AA DA+G LSP + T R+TG +DV++K+LYCGICH+D+H KN +KYPM
Sbjct: 104 KKAVGLAALDASGRLSPLAITRRSTGDDDVMIKILYCGICHSDLHSIKNDWKNAKYPM 277
Score = 66.1 bits (138), Expect = 5e-010
Identities = 33/59 (55%), Positives = 37/59 (62%)
Frame = -1 / -1
Query: 409 PDAYHVADAVLGHFGPDLHHLADHLVPRDHRIL*SPEVVLGLVDVRVADPAVEHLHHHI 233
PD VA LGH DL LA LVPRDH +L VVL V VRVADPAV++L+H I
Sbjct: 364 PDTDTVAGLELGHVLADLGDLAGDLVPRDHGVLSVLPVVLDAVQVRVADPAVQNLYHDI 188
Score = 57.9 bits (120), Expect(2) = 2e-028
Identities = 21/51 (41%), Positives = 31/51 (60%)
Frame = +2 / +2
Query: 425 CRECSPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASTMVVDQKFVVKIP 577
C+ C C E +C I++YN V DG T GG++S +VV ++FVV+ P
Sbjct: 380 CQSCESCDKGFENHCPGIIFTYNSVDRDGTVTHGGYSSMVVVHERFVVRFP 532
Score = 57.4 bits (119), Expect = 2e-007
Identities = 30/57 (52%), Positives = 32/57 (56%)
Frame = -2 / -2
Query: 321 IGYFEAPRWFLAWWMSVWQIPQ*STFTTTSSGPVFLRV*E*GERCPVASLAAHPTTF 151
+GY + FL S WQIPQ F TSS PV LRV GER P AS AA PT F
Sbjct: 276 MGYLAFFQSFLMLCRSEWQIPQYRIFIMTSSSPVLLRVMASGERRPEASSAARPTAF 106
>gb|BF255211.2|BF255211 HVSMEf0006E02f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0006E02f, mRNA sequence
Length = 602
Score = 83.1 bits (175), Expect(2) = 3e-028
Identities = 33/78 (42%), Positives = 48/78 (61%)
Frame = +2 / +2
Query: 434 CSPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASTMVVDQKFVVKIPAGLAPEQAAPLL 613
C C E YC+ + + + V DG TQGGF+ ++V+Q + +++P L+ AAPLL
Sbjct: 5 CGTCSKGYENYCSTLVLTSDGVDYDGATTQGGFSHVLIVNQDYFLRVPESLSLVGAAPLL 184
Query: 614 CAGVTVYSPLKHFGLTNP 667
AGVTVYSP+ +GL P
Sbjct: 185 *AGVTVYSPMMQYGLDAP 238
Score = 62.9 bits (131), Expect(2) = 3e-028
Identities = 30/60 (50%), Positives = 34/60 (56%)
Frame = +2 / +2
Query: 728 KAMGHHVTVISSSSKKRAEAMDHLGADAYLVXXXXXXXXXXXXXXXYIIDTVPVHHPLEP 907
KA G VTVISSS +KR EA++ LGADA+LV IIDTV HPL P
Sbjct: 299 KAFGMTVTVISSSPRKREEALERLGADAFLVSQDAEHMNAAAATMDGIIDTVSAGHPLVP 478
Score = 48.7 bits (100), Expect(2) = 4e-013
Identities = 25/54 (46%), Positives = 28/54 (51%)
Frame = -2 / -3
Query: 666 GFVSPKCFSGLYTVTPAHSSGAACSGARPAGIFTTNFWSTTMVEANPPCVGRPS 505
G SP C GLYTVTPA S+GAA + R +G W T PP V PS
Sbjct: 237 GASSPYCIIGLYTVTPAQSNGAAPTRDRLSGTRRK*SWLTMSTCEKPPWVVAPS 76
Score = 46.4 bits (95), Expect(2) = 4e-013
Identities = 23/32 (71%), Positives = 25/32 (78%)
Frame = -2 / -3
Query: 822 LTRYASAPRWSIASARFLDDELITVTWWPMAL 727
LT+ ASAPR S AS+RFL DELITVT P AL
Sbjct: 393 LTKNASAPRRSSASSRFLGDELITVTVIPNAL 298
>gb|BI947283.1|BI947283 HVSMEl0005A06f Hordeum vulgare spike EST library HVcDNA0012 (Fusarium
infected) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEl0005A06f, mRNA sequence
Length = 994
Score = 70.3 bits (147), Expect(3) = 4e-028
Identities = 28/69 (40%), Positives = 45/69 (65%)
Frame = +2 / +2
Query: 962 EPLSFVSPMVMLGRKAITGSFIGSIDETAEVLQFCVDKGLTSQIEVVKMGYVNEALERLE 1141
EPL+ + ++ G K + G+ +GS+ + +L F G+T+ +EV K Y+N A+ERLE
Sbjct: 407 EPLALPAYAIIGGGKRLAGNGVGSVRDCQAMLDFAGKHGITADVEVFKKDYLNTAVERLE 586
Query: 1142 RNDVRYRFV 1168
ND+RYRF+
Sbjct: 587 NNDLRYRFL 613
Score = 62.5 bits (130), Expect(3) = 4e-028
Identities = 30/60 (50%), Positives = 34/60 (56%)
Frame = +2 / +3
Query: 728 KAMGHHVTVISSSSKKRAEAMDHLGADAYLVXXXXXXXXXXXXXXXYIIDTVPVHHPLEP 907
KA G VTVISSS +KR EA++ LGADA+LV IIDTV HPL P
Sbjct: 174 KAFGMTVTVISSSPRKREEALERLGADAFLVSQDAEQMKAAAGTMDGIIDTVSAGHPLVP 353
Score = 46.4 bits (95), Expect(2) = 7e-006
Identities = 23/32 (71%), Positives = 25/32 (78%)
Frame = -2 / -1
Query: 822 LTRYASAPRWSIASARFLDDELITVTWWPMAL 727
LT+ ASAPR S AS+RFL DELITVT P AL
Sbjct: 268 LTKNASAPRRSSASSRFLGDELITVTVIPNAL 173
Score = 30.9 bits (61), Expect(3) = 4e-028
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +2 / +2
Query: 560 FVVKIPAGLAPEQAAPLLCAGVTVYS 637
+V+++P L+ AAPLL VTVYS
Sbjct: 5 YVLRVPESLSLAGAAPLLLRRVTVYS 82
Score = 24.0 bits (46), Expect(2) = 7e-006
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = -2 / -2
Query: 642 SGLYTVTPAHSSGAACSGARPAG 574
S LYTVT S+GAA + R +G
Sbjct: 87 SXLYTVTRRKSNGAAPARDRLSG 19
>gb|BF254987.2|BF254987 HVSMEf0005J24f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0005J24f, mRNA sequence
Length = 595
Score = 78.0 bits (164), Expect(3) = 7e-028
Identities = 30/54 (55%), Positives = 40/54 (74%)
Frame = +2 / +2
Query: 506 DGRPTQGGFASTMVVDQKFVVKIPAGLAPEQAAPLLCAGVTVYSPLKHFGLTNP 667
DG TQGGF+ +VV+Q +V+++P L+ AAPLLCAGVTVYSP+ +GL P
Sbjct: 5 DGATTQGGFSDVLVVNQDYVLRVPESLSLAGAAPLLCAGVTVYSPMMQYGLNAP 166
Score = 62.0 bits (129), Expect(3) = 7e-028
Identities = 30/60 (50%), Positives = 34/60 (56%)
Frame = +2 / +2
Query: 728 KAMGHHVTVISSSSKKRAEAMDHLGADAYLVXXXXXXXXXXXXXXXYIIDTVPVHHPLEP 907
KA G VTVISSS +KR EA++ LGADA+LV IIDTV HPL P
Sbjct: 227 KAFGMTVTVISSSPRKREEALERLGADAFLVSQDAEQMKAAAGTMDGIIDTVSAVHPLVP 406
Score = 57.4 bits (119), Expect(2) = 1e-015
Identities = 27/54 (50%), Positives = 31/54 (57%)
Frame = -2 / -2
Query: 666 GFVSPKCFSGLYTVTPAHSSGAACSGARPAGIFTTNFWSTTMVEANPPCVGRPS 505
G + P C GLYTVTPA SSGAA + R +G +T W TT PP V PS
Sbjct: 165 GALRPYCIIGLYTVTPAQSSGAAPARDRLSGTRST*SWLTTSTSEKPPWVVAPS 4
Score = 46.4 bits (95), Expect(2) = 1e-015
Identities = 23/32 (71%), Positives = 25/32 (78%)
Frame = -2 / -2
Query: 822 LTRYASAPRWSIASARFLDDELITVTWWPMAL 727
LT+ ASAPR S AS+RFL DELITVT P AL
Sbjct: 321 LTKNASAPRRSSASSRFLGDELITVTVIPNAL 226
Score = 22.6 bits (43), Expect(3) = 7e-028
Identities = 10/41 (24%), Positives = 20/41 (48%)
Frame = +2 / +2
Query: 962 EPLSFVSPMVMLGRKAITGSFIGSIDETAEVLQFCVDKGLT 1084
EPL+ + ++ K + G+ + S+ +L F G+T
Sbjct: 461 EPLALPAYPIIRCCKRLAGNGVASVRNCQAILDFAGKHGIT 583
>gb|AL503387.1|AL503387 AL503387 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW01P08T 5', mRNA sequence
Length = 697
Score = 87.2 bits (184), Expect(2) = 9e-028
Identities = 33/67 (49%), Positives = 44/67 (65%)
Frame = +2 / +1
Query: 122 NRMGSLASERKVVGWAARDATGHLSPYSYTLRNTGPEDVVVKVLYCGICHTDIHQAKNHL 301
+ S+ +GWAARD +G LSPY ++ R EDV +KVL+CGICHTD+H AKN
Sbjct: 58 SEQSSMEKGTPALGWAARDESGLLSPYXFSRRARKDEDVTIKVLFCGICHTDLHIAKNEW 237
Query: 302 GASKYPM 322
G + YP+
Sbjct: 238 GNALYPI 258
Score = 60.6 bits (126), Expect(2) = 9e-028
Identities = 24/55 (43%), Positives = 35/55 (63%)
Frame = +2 / +3
Query: 503 TDGRPTQGGFASTMVVDQKFVVKIPAGLAPEQAAPLLCAGVTVYSPLKHFGLTNP 667
T P +G + +VV+Q +V+++P L+ A PLLCAGVTVY P+ +GL P
Sbjct: 441 TTAPPPRGVSQTVLVVNQDYVLRVPESLSLAGAEPLLCAGVTVYXPMMQYGLXAP 605
Score = 44.6 bits (91), Expect(2) = 5e-007
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = +2 / +2
Query: 425 CRECSPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFA 535
CR C C E YC+ + + N V DG TQGGF+
Sbjct: 362 CRSCGTCSKGYENYCSTLVLTSNGVDYDGATTQGGFS 472
Score = 43.7 bits (89), Expect(3) = 2e-011
Identities = 22/51 (43%), Positives = 26/51 (50%)
Frame = -2 / -1
Query: 666 GFVSPKCFSGLYTVTPAHSSGAACSGARPAGIFTTNFWSTTMVEANPPCVG 514
G P C GLYTVTPA S+G+A + R +G T W TT P G
Sbjct: 604 GAXRPYCIIGLYTVTPAQSNGSAPARDRLSGTRRT*SWLTTSTV*ETPLGG 452
Score = 41.4 bits (84), Expect = 0.013
Identities = 17/25 (68%), Positives = 17/25 (68%)
Frame = -2 / -3
Query: 303 PRWFLAWWMSVWQIPQ*STFTTTSS 229
P FLA W SVWQIPQ ST TSS
Sbjct: 239 PHSFLAMWRSVWQIPQKSTLIVTSS 165
Score = 40.0 bits (81), Expect(3) = 2e-011
Identities = 23/59 (38%), Positives = 31/59 (52%)
Frame = -1 / -2
Query: 409 PDAYHVADAVLGHFGPDLHHLADHLVPRDHRIL*SPEVVLGLVDVRVADPAVEHLHHHI 233
P A+ V D D+ A +L+P + + +VLG V+V VADPA EHL HI
Sbjct: 345 PTAHRVPDLEALDARADVGDDAHNLMPGNDGVEGVAPLVLGDVEVGVADPAEEHLDRHI 169
Score = 33.1 bits (66), Expect(2) = 5e-007
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = +1 / +3
Query: 235 CGGEGALLRDLPHGHPPGQE 294
C +GALLRDLPH P QE
Sbjct: 171 CDDQGALLRDLPHRPPHRQE 230
Score = 22.6 bits (43), Expect(3) = 2e-011
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = -2 / -3
Query: 201 *GERCPVASLAAHPT 157
*GER P +SLAA P+
Sbjct: 137 *GERRPDSSLAAQPS 93
>gb|BF623721.2|BF623721 HVSMEa0005C09f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0005C09f, mRNA sequence
Length = 497
Score = 89.0 bits (188), Expect(2) = 1e-027
Identities = 34/67 (50%), Positives = 45/67 (67%)
Frame = +2 / +2
Query: 122 NRMGSLASERKVVGWAARDATGHLSPYSYTLRNTGPEDVVVKVLYCGICHTDIHQAKNHL 301
+ S+ +GWAARD +G LSPYS++ R EDV +KVL+CGICHTD+H AKN
Sbjct: 50 SEQSSMEKGTPALGWAARDESGLLSPYSFSRRARKDEDVTIKVLFCGICHTDLHIAKNEW 229
Query: 302 GASKYPM 322
G + YP+
Sbjct: 230 GNALYPI 250
Score = 55.1 bits (114), Expect(2) = 1e-027
Identities = 20/48 (41%), Positives = 28/48 (58%)
Frame = +2 / +2
Query: 425 CRECSPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASTMVVDQKFVV 568
CR C C E YC+ + + N V DG TQGGF+ +VV+Q +V+
Sbjct: 353 CRSCGTCSKGYENYCSTLVLTSNGVDYDGATTQGGFSDVLVVNQDYVL 496
Score = 41.4 bits (84), Expect(3) = 2e-006
Identities = 17/25 (68%), Positives = 17/25 (68%)
Frame = -2 / -3
Query: 303 PRWFLAWWMSVWQIPQ*STFTTTSS 229
P FLA W SVWQIPQ ST TSS
Sbjct: 231 PHSFLAMWRSVWQIPQKSTLIVTSS 157
Score = 38.6 bits (78), Expect = 0.088
Identities = 23/62 (37%), Positives = 32/62 (51%)
Frame = -1 / -2
Query: 418 NDHPDAYHVADAVLGHFGPDLHHLADHLVPRDHRIL*SPEVVLGLVDVRVADPAVEHLHH 239
N+ A+ V D D+ A +L+P + + +VLG V+V VADPA EHL
Sbjct: 346 NEVAHAHRVPDLEALDARADVGDDAHNLMPGNDGVEGVAPLVLGDVEVGVADPAEEHLDR 167
Query: 238 HI 233
HI
Sbjct: 166 HI 161
Score = 33.1 bits (66), Expect = 4.0
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = +1 / +1
Query: 235 CGGEGALLRDLPHGHPPGQE 294
C +GALLRDLPH P QE
Sbjct: 163 CDDQGALLRDLPHRPPHRQE 222
Score = 24.4 bits (47), Expect(3) = 2e-006
Identities = 17/44 (38%), Positives = 18/44 (40%)
Frame = -2 / -3
Query: 555 WSTTMVEANPPCVGRPSV*TSLYDQIFLLQYCSTLALQGLHSRQ 424
W TT PP V PS T L + Q S LQ H RQ
Sbjct: 483 WLTTSTSEKPPWVVAPS*STPLEVSTRVEQ*FSYPLLQVPHERQ 352
Score = 22.6 bits (43), Expect(3) = 2e-006
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = -2 / -3
Query: 201 *GERCPVASLAAHPT 157
*GER P +SLAA P+
Sbjct: 129 *GERRPDSSLAAQPS 85
>gb|BJ447263.1|BJ447263 BJ447263 K. Sato unpublished cDNA library, cv. Akashinriki vegetative
stage leaves Hordeum vulgare subsp. vulgare cDNA clone
baak14l05 5', mRNA sequence
Length = 575
Score = 92.3 bits (195), Expect(2) = 2e-027
Identities = 36/75 (48%), Positives = 53/75 (70%)
Frame = +2 / +3
Query: 962 EPLSFVSPMVMLGRKAITGSFIGSIDETAEVLQFCVDKGLTSQIEVVKMGYVNEALERLE 1141
+PL + ++ G K I G+ +G I + +L+F G+T+++EV+KM YVN ALERL
Sbjct: 231 KPLELPAYAIVPGGKGIAGNCVGGIRDCQAMLEFAAKHGITAEVEVIKMDYVNTALERLA 410
Query: 1142 RNDVRYRFVVDVAGS 1186
+NDVRYRFV+D+AGS
Sbjct: 411 KNDVRYRFVIDIAGS 455
Score = 51.5 bits (106), Expect(2) = 2e-027
Identities = 24/57 (42%), Positives = 30/57 (52%)
Frame = +2 / +3
Query: 737 GHHVTVISSSSKKRAEAMDHLGADAYLVXXXXXXXXXXXXXXXYIIDTVPVHHPLEP 907
G VTVIS+S KR EA++ LGAD +LV I+DTV HP+ P
Sbjct: 6 GMRVTVISTSPGKREEALERLGADEFLVSRDPEQMQAAVGTMDGILDTVSAWHPISP 176
Score = 42.3 bits (86), Expect(2) = 2e-007
Identities = 21/68 (30%), Positives = 32/68 (47%)
Frame = -1 / -1
Query: 1138 QPLQRXXXXXXXXXXXLGGEPLVDAELKHLSGLVDAADEAPRDGLPPQHHHGRHEAQGLA 959
+PL+R L G+ ++ E +H + DAAD P D LP +H R + Q L
Sbjct: 407 EPLERRVDVVHLYHLHLRGDAVLCREFQHGLAVPDAADAVPGDALPARHDGVRRQLQRLG 228
Query: 958 DDAQQHEL 935
+ +H L
Sbjct: 227 RPSHEHHL 204
Score = 33.6 bits (67), Expect(2) = 2e-007
Identities = 17/29 (58%), Positives = 20/29 (68%)
Frame = -2 / -2
Query: 822 LTRYASAPRWSIASARFLDDELITVTWWP 736
LTR +SAP S AS+RF + LITVT P
Sbjct: 91 LTRNSSAPSRSSASSRFPGEVLITVTRMP 5
>gb|BJ454765.1|BJ454765 BJ454765 K. Sato unpublished cDNA library, cv. Akashinriki vegetative
stage leaves Hordeum vulgare subsp. vulgare cDNA clone
baak14l05 3', mRNA sequence
Length = 554
Score = 92.3 bits (195), Expect(2) = 2e-027
Identities = 36/75 (48%), Positives = 53/75 (70%)
Frame = +2 / -3
Query: 962 EPLSFVSPMVMLGRKAITGSFIGSIDETAEVLQFCVDKGLTSQIEVVKMGYVNEALERLE 1141
+PL + ++ G K I G+ +G I + +L+F G+T+++EV+KM YVN ALERL
Sbjct: 324 KPLELPAYAIVPGGKGIAGNCVGGIRDCQAMLEFAAKHGITAEVEVIKMDYVNTALERLA 145
Query: 1142 RNDVRYRFVVDVAGS 1186
+NDVRYRFV+D+AGS
Sbjct: 144 KNDVRYRFVIDIAGS 100
Score = 51.5 bits (106), Expect(2) = 2e-027
Identities = 24/57 (42%), Positives = 30/57 (52%)
Frame = +2 / -3
Query: 737 GHHVTVISSSSKKRAEAMDHLGADAYLVXXXXXXXXXXXXXXXYIIDTVPVHHPLEP 907
G VTVIS+S KR EA++ LGAD +LV I+DTV HP+ P
Sbjct: 549 GMRVTVISTSPGKREEALERLGADEFLVSRDPEQMQAAVGTMDGILDTVSAWHPISP 379
Score = 42.3 bits (86), Expect(2) = 2e-007
Identities = 21/68 (30%), Positives = 32/68 (47%)
Frame = -1 / +1
Query: 1138 QPLQRXXXXXXXXXXXLGGEPLVDAELKHLSGLVDAADEAPRDGLPPQHHHGRHEAQGLA 959
+PL+R L G+ ++ E +H + DAAD P D LP +H R + Q L
Sbjct: 148 EPLERRVDVVHLYHLHLRGDAVLCREFQHGLAVPDAADAVPGDALPARHDGVRRQLQRLG 327
Query: 958 DDAQQHEL 935
+ +H L
Sbjct: 328 RPSHEHHL 351
Score = 33.6 bits (67), Expect(2) = 2e-007
Identities = 17/29 (58%), Positives = 20/29 (68%)
Frame = -2 / +2
Query: 822 LTRYASAPRWSIASARFLDDELITVTWWP 736
LTR +SAP S AS+RF + LITVT P
Sbjct: 464 LTRNSSAPSRSSASSRFPGEVLITVTRMP 550
>gb|BE214050.2|BE214050 HV_CEb0002A10f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0002A10f, mRNA sequence
Length = 712
Score = 88.6 bits (187), Expect(2) = 1e-026
Identities = 33/58 (56%), Positives = 44/58 (75%)
Frame = +2 / +1
Query: 149 RKVVGWAARDATGHLSPYSYTLRNTGPEDVVVKVLYCGICHTDIHQAKNHLGASKYPM 322
+K VG AA DA+G LSP + T R+TG +DV++K+LYCGICH+D+H KN +KYPM
Sbjct: 148 KKAVGLAALDASGRLSPLAITRRSTGDDDVMIKILYCGICHSDLHSIKNDWKNAKYPM 321
Score = 66.1 bits (138), Expect = 5e-010
Identities = 33/59 (55%), Positives = 37/59 (62%)
Frame = -1 / -2
Query: 409 PDAYHVADAVLGHFGPDLHHLADHLVPRDHRIL*SPEVVLGLVDVRVADPAVEHLHHHI 233
PD VA LGH DL LA LVPRDH +L VVL V VRVADPAV++L+H I
Sbjct: 408 PDTDTVAGLELGHVLADLGDLAGDLVPRDHGVLSVLPVVLDAVQVRVADPAVQNLYHDI 232
Score = 57.4 bits (119), Expect = 2e-007
Identities = 30/57 (52%), Positives = 32/57 (56%)
Frame = -2 / -3
Query: 321 IGYFEAPRWFLAWWMSVWQIPQ*STFTTTSSGPVFLRV*E*GERCPVASLAAHPTTF 151
+GY + FL S WQIPQ F TSS PV LRV GER P AS AA PT F
Sbjct: 320 MGYLAFFQSFLMLCRSEWQIPQYRIFIMTSSSPVLLRVMASGERRPEASSAARPTAF 150
Score = 51.9 bits (107), Expect(2) = 1e-026
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +2 / +1
Query: 425 CRECSPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASTMVVDQKFV 565
C+ C C E +C I++YN V DG T GG++S +VV ++FV
Sbjct: 424 CQSCESCDKGFENHCPGIIFTYNSVDRDGTVTHGGYSSMVVVHERFV 564
>gb|BF624454.2|BF624454 HVSMEa0016F14f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0016F14f, mRNA sequence
Length = 768
Score = 88.1 bits (186), Expect(3) = 2e-026
Identities = 32/66 (48%), Positives = 45/66 (68%)
Frame = +2 / +1
Query: 125 RMGSLASERKVVGWAARDATGHLSPYSYTLRNTGPEDVVVKVLYCGICHTDIHQAKNHLG 304
+ S+A +GWAA+D +G LSPYS++ R +DV +KVL+CGICHTD+H KN G
Sbjct: 112 KQSSMAKGMPAIGWAAKDTSGVLSPYSFSRRAHKDDDVTIKVLFCGICHTDLHIVKNEWG 291
Query: 305 ASKYPM 322
+ YP+
Sbjct: 292 NALYPV 309
Score = 52.4 bits (108), Expect(2) = 3e-008
Identities = 27/48 (56%), Positives = 27/48 (56%)
Frame = -2 / -2
Query: 303 PRWFLAWWMSVWQIPQ*STFTTTSSGPVFLRV*E*GERCPVASLAAHP 160
P FL W SVWQIPQ ST TSS LR *GER P S AA P
Sbjct: 290 PHSFLTIWRSVWQIPQKSTLIVTSSSL*ALREKL*GERTPDVSFAAQP 147
Score = 38.2 bits (77), Expect(3) = 2e-026
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +2 / +1
Query: 425 CRECSPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASTMVVDQ 556
CR C C + + +C + + + DG TQ GF+ +VVD+
Sbjct: 412 CRSCVSCSSGHDNHCPTLVLTCSAADYDGATTQRGFSDVLVVDR 543
Score = 35.0 bits (70), Expect = 1.1
Identities = 14/21 (66%), Positives = 15/21 (71%)
Frame = +1 / +3
Query: 232 RCGGEGALLRDLPHGHPPGQE 294
RC +GALLRDLPH P QE
Sbjct: 219 RCDDQGALLRDLPHRPPYRQE 281
Score = 33.6 bits (67), Expect = 2.9
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = -1 / -1
Query: 343 DHLVPRDHRIL*SPEVVLGLVDVRVADPAVEHLHHHI 233
++L+P D + +VL ++V VADPA EHL HI
Sbjct: 330 NNLMPGDDGVEGVSPLVLDDMEVGVADPAEEHLDRHI 220
Score = 31.3 bits (62), Expect(3) = 2e-026
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +2 / +3
Query: 554 QKFVVKIPAGLAPEQAAPLLCAGV 625
Q +VV++P GL + A PLL AGV
Sbjct: 540 QGYVVRVPEGLPLDGAEPLLLAGV 611
Score = 29.5 bits (58), Expect(2) = 3e-008
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = -2 / -3
Query: 624 TPAHSSGAACSGARPAGIFTT 562
TPA SSG+A S RP+G TT
Sbjct: 610 TPAKSSGSAPSRGRPSGTRTT 548
>gb|CB879610.1|CB879610 HP02P10w HP Hordeum vulgare subsp. vulgare cDNA clone HP02P10
3-PRIME, mRNA sequence
Length = 667
Score = 89.5 bits (189), Expect(2) = 2e-025
Identities = 35/75 (46%), Positives = 53/75 (70%)
Frame = +2 / -1
Query: 962 EPLSFVSPMVMLGRKAITGSFIGSIDETAEVLQFCVDKGLTSQIEVVKMGYVNEALERLE 1141
+P+ S ++ G++ ++GS G + ET E++ C + G+T+ IE+V G +N+AL RL
Sbjct: 421 KPVELPSFPLIFGKRTVSGSMTGGMKETQEMMDLCGEHGITADIELVSTGGINDALARLA 242
Query: 1142 RNDVRYRFVVDVAGS 1186
RNDVRYRFVVDVAG+
Sbjct: 241 RNDVRYRFVVDVAGN 197
Score = 47.3 bits (97), Expect(2) = 2e-025
Identities = 23/60 (38%), Positives = 29/60 (48%)
Frame = +2 / -1
Query: 728 KAMGHHVTVISSSSKKRAEAMDHLGADAYLVXXXXXXXXXXXXXXXYIIDTVPVHHPLEP 907
KA G VTVIS+S K EA + L AD +++ Y+IDTV H L P
Sbjct: 655 KAFGLKVTVISTSPAKEREARESLKADDFVLSTDDKQMQAMARSLDYVIDTVSAQHSLGP 476
>gb|BM368384.2|BM368384 EBed01_SQ002_P23_R endosperm, 6 DPA, no treatment, cv Optic, EBed01
Hordeum vulgare subsp. vulgare cDNA clone
EBed01_SQ002_P23 5', mRNA sequence
Length = 568
Score = 80.3 bits (169), Expect(2) = 3e-025
Identities = 31/53 (58%), Positives = 41/53 (77%)
Frame = +2 / +3
Query: 509 GRPTQGGFASTMVVDQKFVVKIPAGLAPEQAAPLLCAGVTVYSPLKHFGLTNP 667
G TQGGF+ M+V++ +VV++P GL ++AAPLLCAGVTVYSP+ FGL P
Sbjct: 75 GAVTQGGFSDVMLVNEDYVVRVPDGLPLDKAAPLLCAGVTVYSPMMRFGLNAP 233
Score = 55.6 bits (115), Expect(2) = 3e-025
Identities = 26/60 (43%), Positives = 32/60 (53%)
Frame = +2 / +3
Query: 728 KAMGHHVTVISSSSKKRAEAMDHLGADAYLVXXXXXXXXXXXXXXXYIIDTVPVHHPLEP 907
KA G VTVIS+S KR EA++ LGAD +LV I+DTV HP+ P
Sbjct: 294 KAFGMRVTVISTSPGKREEALERLGADEFLVSRDPEQMQAAVGTMDGILDTVSAWHPISP 473
Score = 55.1 bits (114), Expect(2) = 1e-011
Identities = 27/53 (50%), Positives = 29/53 (54%)
Frame = -2 / -1
Query: 666 GFVSPKCFSGLYTVTPAHSSGAACSGARPAGIFTTNFWSTTMVEANPPCVGRP 508
G PK GLYTVTPA SSGAA S P+G TT T+M PP V P
Sbjct: 232 GAFRPKRIIGLYTVTPAQSSGAALSSGSPSGTRTT*SSFTSMTSEKPPWVTAP 74
Score = 35.0 bits (70), Expect(2) = 1e-011
Identities = 18/32 (56%), Positives = 22/32 (68%)
Frame = -2 / -1
Query: 822 LTRYASAPRWSIASARFLDDELITVTWWPMAL 727
LTR +SAP S AS+RF + L+TVT P AL
Sbjct: 388 LTRNSSAPSRSSASSRFPGEVLMTVTRMPNAL 293
>gb|CB876945.1|CB876945 HP02P10T HP Hordeum vulgare subsp. vulgare cDNA clone HP02P10
5-PRIME, mRNA sequence
Length = 587
Score = 74.4 bits (156), Expect(2) = 9e-025
Identities = 25/54 (46%), Positives = 37/54 (68%)
Frame = +2 / +3
Query: 161 GWAARDATGHLSPYSYTLRNTGPEDVVVKVLYCGICHTDIHQAKNHLGASKYPM 322
GWAA +A+G + P+++ R G +DV +KV YCG+CHTD+H N G + YP+
Sbjct: 150 GWAAMEASGKVVPFAFKRRENGVDDVTIKVHYCGMCHTDLHFINNDWGITMYPV 311
Score = 60.2 bits (125), Expect(2) = 9e-025
Identities = 19/51 (37%), Positives = 34/51 (66%)
Frame = +2 / +3
Query: 425 CRECSPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASTMVVDQKFVVKIP 577
C +C C+ + E YC+K +YN ++ DG T GG+++ +V ++F+V+IP
Sbjct: 414 CLDCDHCRRSEENYCDKVALTYNGIFWDGSVTYGGYSNMLVAHKRFLVRIP 566
Score = 53.8 bits (111), Expect = 2e-006
Identities = 25/53 (47%), Positives = 29/53 (54%)
Frame = -2 / -2
Query: 318 GYFEAPRWFLAWWMSVWQIPQ*STFTTTSSGPVFLRV*E*GERCPVASLAAHP 160
GY P+ L W SVW +PQ* T TSS P R+ G P AS+AAHP
Sbjct: 307 GYMVMPQSLLMKWRSVWHMPQ*CTLMVTSSTPFSRRLKAKGTTLPDASMAAHP 149
>gb|BM370236.2|BM370236 EBro08_SQ003_H20_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ003_H20 5', mRNA sequence
Length = 493
Score = 84.9 bits (179), Expect(2) = 9e-025
Identities = 33/67 (49%), Positives = 44/67 (65%)
Frame = +2 / +3
Query: 122 NRMGSLASERKVVGWAARDATGHLSPYSYTLRNTGPEDVVVKVLYCGICHTDIHQAKNHL 301
+ S+ +GWAARD +G LS YS++ R EDV +KVL+CGICHTD+H AKN
Sbjct: 60 SEQSSMEKGTPALGWAARDESGLLSRYSFSRRARKDEDVTIKVLFCGICHTDLHIAKNEW 239
Query: 302 GASKYPM 322
G + YP+
Sbjct: 240 GNALYPI 260
Score = 49.6 bits (102), Expect(2) = 9e-025
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = +2 / +3
Query: 425 CRECSPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASTMVVD 553
CR C C E YC+ + + N V DG TQGGF+ +VV+
Sbjct: 363 CRSCGTCSKGYENYCSTLVLTSNGVDYDGATTQGGFSDVLVVN 491
Score = 41.4 bits (84), Expect(2) = 1e-004
Identities = 17/25 (68%), Positives = 17/25 (68%)
Frame = -2 / -1
Query: 303 PRWFLAWWMSVWQIPQ*STFTTTSS 229
P FLA W SVWQIPQ ST TSS
Sbjct: 241 PHSFLAMWRSVWQIPQKSTLIVTSS 167
Score = 38.6 bits (78), Expect = 0.088
Identities = 23/62 (37%), Positives = 32/62 (51%)
Frame = -1 / -3
Query: 418 NDHPDAYHVADAVLGHFGPDLHHLADHLVPRDHRIL*SPEVVLGLVDVRVADPAVEHLHH 239
N+ A+ V D D+ A +L+P + + +VLG V+V VADPA EHL
Sbjct: 356 NEVAHAHRVPDLEALDARADVGDDAHNLMPGNDGVEGVAPLVLGDVEVGVADPAEEHLDR 177
Query: 238 HI 233
HI
Sbjct: 176 HI 171
Score = 33.1 bits (66), Expect = 4.0
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = +1 / +2
Query: 235 CGGEGALLRDLPHGHPPGQE 294
C +GALLRDLPH P QE
Sbjct: 173 CDDQGALLRDLPHRPPHRQE 232
Score = 24.4 bits (47), Expect(2) = 1e-004
Identities = 17/44 (38%), Positives = 18/44 (40%)
Frame = -2 / -1
Query: 555 WSTTMVEANPPCVGRPSV*TSLYDQIFLLQYCSTLALQGLHSRQ 424
W TT PP V PS T L + Q S LQ H RQ
Sbjct: 493 WLTTSTSEKPPWVVAPS*STPLEVSTRVEQ*FSYPLLQVPHERQ 362
>gb|BJ473108.1|BJ473108 BJ473108 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal38b23 5', mRNA sequence
Length = 598
Score = 88.6 bits (187), Expect(3) = 1e-024
Identities = 33/58 (56%), Positives = 44/58 (75%)
Frame = +2 / +3
Query: 149 RKVVGWAARDATGHLSPYSYTLRNTGPEDVVVKVLYCGICHTDIHQAKNHLGASKYPM 322
+K VG AA DA+G LSP + T R+TG +DV++K+LYCGICH+D+H KN +KYPM
Sbjct: 120 KKAVGLAALDASGRLSPLAITRRSTGDDDVMIKILYCGICHSDLHSIKNDWKNAKYPM 293
Score = 66.1 bits (138), Expect = 5e-010
Identities = 33/59 (55%), Positives = 37/59 (62%)
Frame = -1 / -3
Query: 409 PDAYHVADAVLGHFGPDLHHLADHLVPRDHRIL*SPEVVLGLVDVRVADPAVEHLHHHI 233
PD VA LGH DL LA LVPRDH +L VVL V VRVADPAV++L+H I
Sbjct: 380 PDTDTVAGLELGHVLADLGDLAGDLVPRDHGVLSVLPVVLDAVQVRVADPAVQNLYHDI 204
Score = 57.4 bits (119), Expect = 2e-007
Identities = 30/57 (52%), Positives = 32/57 (56%)
Frame = -2 / -1
Query: 321 IGYFEAPRWFLAWWMSVWQIPQ*STFTTTSSGPVFLRV*E*GERCPVASLAAHPTTF 151
+GY + FL S WQIPQ F TSS PV LRV GER P AS AA PT F
Sbjct: 292 MGYLAFFQSFLMLCRSEWQIPQYRIFIMTSSSPVLLRVMASGERRPEASSAARPTAF 122
Score = 40.0 bits (81), Expect(3) = 1e-024
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +2 / +3
Query: 425 CRECSPCKANVEQYCNKKIWSYNDVYTDGRPTQGGF 532
C+ C C E +C I++YN V DG T GG+
Sbjct: 396 CQSCESCDKGFENHCPGIIFTYNSVDRDGTVTHGGY 503
Score = 23.1 bits (44), Expect(3) = 1e-024
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = +2 / +2
Query: 593 EQAAPLLCAGV 625
++ APLLCAG+
Sbjct: 566 DKGAPLLCAGI 598
>gb|CB878272.1|CB878272 HP07O19T HP Hordeum vulgare subsp. vulgare cDNA clone HP07O19
5-PRIME, mRNA sequence
Length = 595
Score = 77.6 bits (163), Expect(2) = 2e-024
Identities = 30/55 (54%), Positives = 41/55 (74%)
Frame = +2 / +1
Query: 503 TDGRPTQGGFASTMVVDQKFVVKIPAGLAPEQAAPLLCAGVTVYSPLKHFGLTNP 667
T R +GGF+ M+V++ +VV++P GL ++AAPLLCAGVTVYSP+ FGL P
Sbjct: 73 TAARSPRGGFSDVMLVNEDYVVRVPDGLPLDKAAPLLCAGVTVYSPMMRFGLNAP 237
Score = 55.6 bits (115), Expect(2) = 2e-024
Identities = 26/60 (43%), Positives = 32/60 (53%)
Frame = +2 / +1
Query: 728 KAMGHHVTVISSSSKKRAEAMDHLGADAYLVXXXXXXXXXXXXXXXYIIDTVPVHHPLEP 907
KA G VTVIS+S KR EA++ LGAD +LV I+DTV HP+ P
Sbjct: 298 KAFGMRVTVISTSPGKREEALERLGADEFLVSRDPEQMQAAVGTMDGILDTVSAWHPISP 477
Score = 54.2 bits (112), Expect(2) = 2e-011
Identities = 27/55 (49%), Positives = 30/55 (54%)
Frame = -2 / -3
Query: 666 GFVSPKCFSGLYTVTPAHSSGAACSGARPAGIFTTNFWSTTMVEANPPCVGRPSV 502
G PK GLYTVTPA SSGAA S P+G TT T+M PP R +V
Sbjct: 236 GAFRPKRIIGLYTVTPAQSSGAALSSGSPSGTRTT*SSFTSMTSEKPPLGDRAAV 72
Score = 35.0 bits (70), Expect(2) = 2e-011
Identities = 18/32 (56%), Positives = 22/32 (68%)
Frame = -2 / -3
Query: 822 LTRYASAPRWSIASARFLDDELITVTWWPMAL 727
LTR +SAP S AS+RF + L+TVT P AL
Sbjct: 392 LTRNSSAPSRSSASSRFPGEVLMTVTRMPNAL 297
>gb|BF630114.2|BF630114 HVSMEb0008A03f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0008A03f, mRNA sequence
Length = 506
Score = 88.6 bits (187), Expect(2) = 4e-024
Identities = 32/66 (48%), Positives = 44/66 (66%)
Frame = +2 / +1
Query: 125 RMGSLASERKVVGWAARDATGHLSPYSYTLRNTGPEDVVVKVLYCGICHTDIHQAKNHLG 304
+ S+A +GWAA+D +G LSPYS++ R DV +KVL+CGICHTD+H KN G
Sbjct: 40 KQASMAKGMPAIGWAAKDTSGVLSPYSFSRRAQNDHDVTIKVLFCGICHTDLHIVKNEWG 219
Query: 305 ASKYPM 322
+ YP+
Sbjct: 220 NALYPV 237
Score = 49.2 bits (101), Expect(2) = 4e-006
Identities = 26/48 (54%), Positives = 27/48 (56%)
Frame = -2 / -1
Query: 303 PRWFLAWWMSVWQIPQ*STFTTTSSGPVFLRV*E*GERCPVASLAAHP 160
P FL W SVWQIPQ ST TS LR *G+R P SLAA P
Sbjct: 218 PHSFLTIWRSVWQIPQKSTLMVTSWSF*ALREKL*GDRTPDVSLAAQP 75
Score = 43.7 bits (89), Expect(2) = 4e-024
Identities = 18/54 (33%), Positives = 28/54 (51%)
Frame = +2 / +1
Query: 425 CRECSPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASTMVVDQKFVVKIPAGL 586
CR C + +C + + N DG T GF+ +VVD+ +VV++P GL
Sbjct: 340 CRSCMIWNTGHDNHCPTLVLT*NAADYDGATTT*GFSDVLVVDKGYVVRVPEGL 501
Score = 24.9 bits (48), Expect(2) = 4e-006
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = -2 / -1
Query: 585 RPAGIFTTNFWSTTMVEANPPCVGRPS 505
RP+G TT STT NP V PS
Sbjct: 500 RPSGTRTT*PLSTTSTSENPHVVVAPS 420
>gb|BU995847.1|BU995847 HM11I22r HM Hordeum vulgare subsp. vulgare cDNA clone HM11I22
5-PRIME, mRNA sequence
Length = 564
Score = 88.6 bits (187), Expect(2) = 1e-023
Identities = 33/58 (56%), Positives = 44/58 (75%)
Frame = +2 / +2
Query: 149 RKVVGWAARDATGHLSPYSYTLRNTGPEDVVVKVLYCGICHTDIHQAKNHLGASKYPM 322
+K VG AA DA+G LSP + T R+TG +DV++K+LYCGICH+D+H KN +KYPM
Sbjct: 158 KKAVGLAALDASGRLSPLAITRRSTGDDDVMIKILYCGICHSDLHSIKNDWKNAKYPM 331
Score = 66.1 bits (138), Expect = 5e-010
Identities = 33/59 (55%), Positives = 37/59 (62%)
Frame = -1 / -3
Query: 409 PDAYHVADAVLGHFGPDLHHLADHLVPRDHRIL*SPEVVLGLVDVRVADPAVEHLHHHI 233
PD VA LGH DL LA LVPRDH +L VVL V VRVADPAV++L+H I
Sbjct: 418 PDTDTVAGLELGHVLADLGDLAGDLVPRDHGVLSVLPVVLDAVQVRVADPAVQNLYHDI 242
Score = 57.4 bits (119), Expect = 2e-007
Identities = 30/57 (52%), Positives = 32/57 (56%)
Frame = -2 / -1
Query: 321 IGYFEAPRWFLAWWMSVWQIPQ*STFTTTSSGPVFLRV*E*GERCPVASLAAHPTTF 151
+GY + FL S WQIPQ F TSS PV LRV GER P AS AA PT F
Sbjct: 330 MGYLAFFQSFLMLCRSEWQIPQYRIFIMTSSSPVLLRVMASGERRPEASSAARPTAF 160
Score = 42.3 bits (86), Expect(2) = 1e-023
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +2 / +2
Query: 425 CRECSPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFAS 538
C+ C C E +C I++YN V DG T GG++S
Sbjct: 434 CQSCESCDKGFENHCPGIIFTYNSVDRDGTVTHGGYSS 547
>gb|CA020634.1|CA020634 HZ36O20r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ36O20
5-PRIME, mRNA sequence
Length = 554
Score = 88.6 bits (187), Expect(2) = 1e-023
Identities = 33/58 (56%), Positives = 44/58 (75%)
Frame = +2 / +1
Query: 149 RKVVGWAARDATGHLSPYSYTLRNTGPEDVVVKVLYCGICHTDIHQAKNHLGASKYPM 322
+K VG AA DA+G LSP + T R+TG +DV++K+LYCGICH+D+H KN +KYPM
Sbjct: 163 KKAVGLAALDASGRLSPLAITRRSTGDDDVMIKILYCGICHSDLHSIKNDWKNAKYPM 336
Score = 66.1 bits (138), Expect = 5e-010
Identities = 33/59 (55%), Positives = 37/59 (62%)
Frame = -1 / -3
Query: 409 PDAYHVADAVLGHFGPDLHHLADHLVPRDHRIL*SPEVVLGLVDVRVADPAVEHLHHHI 233
PD VA LGH DL LA LVPRDH +L VVL V VRVADPAV++L+H I
Sbjct: 423 PDTDTVAGLELGHVLADLGDLAGDLVPRDHGVLSVLPVVLDAVQVRVADPAVQNLYHDI 247
Score = 57.4 bits (119), Expect = 2e-007
Identities = 30/57 (52%), Positives = 32/57 (56%)
Frame = -2 / -1
Query: 321 IGYFEAPRWFLAWWMSVWQIPQ*STFTTTSSGPVFLRV*E*GERCPVASLAAHPTTF 151
+GY + FL S WQIPQ F TSS PV LRV GER P AS AA PT F
Sbjct: 335 MGYLAFFQSFLMLCRSEWQIPQYRIFIMTSSSPVLLRVMASGERRPEASSAARPTAF 165
Score = 42.3 bits (86), Expect(2) = 1e-023
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +2 / +1
Query: 425 CRECSPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFAS 538
C+ C C E +C I++YN V DG T GG++S
Sbjct: 439 CQSCESCDKGFENHCPGIIFTYNSVDRDGTVTHGGYSS 552
>gb|BU980077.1|BU980077 HA18H11r HA Hordeum vulgare subsp. vulgare cDNA clone HA18H11
5-PRIME, mRNA sequence
Length = 508
Score = 88.6 bits (187), Expect(2) = 1e-023
Identities = 33/58 (56%), Positives = 44/58 (75%)
Frame = +2 / +2
Query: 149 RKVVGWAARDATGHLSPYSYTLRNTGPEDVVVKVLYCGICHTDIHQAKNHLGASKYPM 322
+K VG AA DA+G LSP + T R+TG +DV++K+LYCGICH+D+H KN +KYPM
Sbjct: 119 KKAVGLAALDASGRLSPLAITRRSTGDDDVMIKILYCGICHSDLHSIKNDWKNAKYPM 292
Score = 66.1 bits (138), Expect = 5e-010
Identities = 33/59 (55%), Positives = 37/59 (62%)
Frame = -1 / -1
Query: 409 PDAYHVADAVLGHFGPDLHHLADHLVPRDHRIL*SPEVVLGLVDVRVADPAVEHLHHHI 233
PD VA LGH DL LA LVPRDH +L VVL V VRVADPAV++L+H I
Sbjct: 379 PDTDTVAGLELGHVLADLGDLAGDLVPRDHGVLSVLPVVLDAVQVRVADPAVQNLYHDI 203
Score = 57.4 bits (119), Expect = 2e-007
Identities = 30/57 (52%), Positives = 32/57 (56%)
Frame = -2 / -2
Query: 321 IGYFEAPRWFLAWWMSVWQIPQ*STFTTTSSGPVFLRV*E*GERCPVASLAAHPTTF 151
+GY + FL S WQIPQ F TSS PV LRV GER P AS AA PT F
Sbjct: 291 MGYLAFFQSFLMLCRSEWQIPQYRIFIMTSSSPVLLRVMASGERRPEASSAARPTAF 121
Score = 42.3 bits (86), Expect(2) = 1e-023
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +2 / +2
Query: 425 CRECSPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFAS 538
C+ C C E +C I++YN V DG T GG++S
Sbjct: 395 CQSCESCDKGFENHCPGIIFTYNSVDRDGTVTHGGYSS 508
>gb|BJ456704.1|BJ456704 BJ456704 K. Sato unpublished cDNA library, cv. Akashinriki vegetative
stage leaves Hordeum vulgare subsp. vulgare cDNA clone
baak23a07 3', mRNA sequence
Length = 674
Score = 75.3 bits (158), Expect(2) = 1e-023
Identities = 28/64 (43%), Positives = 42/64 (65%)
Frame = +2 / -1
Query: 995 LGRKAITGSFIGSIDETAEVLQFCVDKGLTSQIEVVKMGYVNEALERLERNDVRYRFVVD 1174
LG + ++GS G +T E++ FC + IE++K+ Y+N+ALERL DVRYRFV+D
Sbjct: 308 LGARTLSGSVTGGTKDTQEMINFCAANKIYPDIELIKIDYINQALERLVNRDVRYRFVID 129
Query: 1175 VAGS 1186
+ S
Sbjct: 128 IESS 117
Score = 55.1 bits (114), Expect(2) = 1e-023
Identities = 24/61 (39%), Positives = 33/61 (54%)
Frame = +2 / -1
Query: 728 KAMGHHVTVISSSSKKRAEAMDHLGADAYLVXXXXXXXXXXXXXXXYIIDTVPVHHPLEP 907
KA G VTV+S+S KR EA++ LGAD ++V +I+DT HP +P
Sbjct: 572 KAFGLKVTVLSTSESKRDEAINLLGADNFVVSSDKKQMESLKSSLDFIVDTASGDHPFDP 393
Query: 908 Y 910
Y
Sbjct: 392 Y 390
>gb|CA019921.1|CA019921 HV13L15r HV Hordeum vulgare subsp. vulgare cDNA clone HV13L15
5-PRIME, mRNA sequence
Length = 553
Score = 74.4 bits (156), Expect(2) = 3e-023
Identities = 25/54 (46%), Positives = 37/54 (68%)
Frame = +2 / +2
Query: 161 GWAARDATGHLSPYSYTLRNTGPEDVVVKVLYCGICHTDIHQAKNHLGASKYPM 322
GWAA +A+G + P+++ R G +DV +KV YCG+CHTD+H N G + YP+
Sbjct: 143 GWAAMEASGKVVPFAFKRRENGVDDVTIKVHYCGMCHTDLHFINNDWGITMYPV 304
Score = 55.1 bits (114), Expect(2) = 3e-023
Identities = 17/49 (34%), Positives = 32/49 (65%)
Frame = +2 / +2
Query: 425 CRECSPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASTMVVDQKFVVK 571
C +C C+ + E YC+K +YN ++ DG T GG+++ +V ++F+V+
Sbjct: 407 CLDCDHCRRSEENYCDKVALTYNGIFWDGSVTYGGYSNMLVAHKRFLVR 553
Score = 53.8 bits (111), Expect = 2e-006
Identities = 25/53 (47%), Positives = 29/53 (54%)
Frame = -2 / -2
Query: 318 GYFEAPRWFLAWWMSVWQIPQ*STFTTTSSGPVFLRV*E*GERCPVASLAAHP 160
GY P+ L W SVW +PQ* T TSS P R+ G P AS+AAHP
Sbjct: 300 GYMVMPQSLLMKWRSVWHMPQ*CTLMVTSSTPFSRRLKAKGTTLPDASMAAHP 142
>gb|BI957691.1|BI957691 HVSMEn0010L07f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0010L07f, mRNA sequence
Length = 643
Score = 50.1 bits (103), Expect(3) = 9e-023
Identities = 25/53 (47%), Positives = 29/53 (54%)
Frame = +2 / +3
Query: 728 KAMGHHVTVISSSSKKRAEAMDHLGADAYLVXXXXXXXXXXXXXXXYIIDTVP 886
KA G VTVISSS +KR EA+ LGAD++LV IIDT P
Sbjct: 321 KAFGMTVTVISSSPRKREEAVKRLGADSFLVSQYPEQMNAAAGTMDSIIDTCP 479
Score = 48.7 bits (100), Expect(3) = 9e-023
Identities = 18/50 (36%), Positives = 30/50 (60%)
Frame = +2 / +1
Query: 434 CSPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASTMVVDQKFVVKIPAG 583
C C + + +C + + + V DG TQGGF+ +VVD+ +VV++P G
Sbjct: 28 CVSCXSGHDNHCPTLVLTCSAVDYDGATTQGGFSDVLVVDKGYVVRVPEG 177
Score = 46.4 bits (95), Expect(3) = 9e-023
Identities = 18/23 (78%), Positives = 19/23 (82%)
Frame = +2 / +3
Query: 599 AAPLLCAGVTVYSPLKHFGLTNP 667
AAPLLCAGVTVYSP+ FGL P
Sbjct: 192 AAPLLCAGVTVYSPMMEFGLNAP 260
Score = 39.1 bits (79), Expect(3) = 3e-011
Identities = 20/32 (62%), Positives = 22/32 (68%)
Frame = -2 / -1
Query: 822 LTRYASAPRWSIASARFLDDELITVTWWPMAL 727
LT+ SAP AS+RFL DELITVT P AL
Sbjct: 415 LTKNESAPSRLTASSRFLGDELITVTVIPNAL 320
Score = 37.3 bits (75), Expect(3) = 3e-011
Identities = 17/29 (58%), Positives = 18/29 (62%)
Frame = -2 / -1
Query: 666 GFVSPKCFSGLYTVTPAHSSGAACSGARP 580
G + P GLYTVTPA SSGAA S P
Sbjct: 259 GALRPNSIIGLYTVTPAQSSGAAPSTPPP 173
Score = 29.5 bits (58), Expect(3) = 3e-011
Identities = 20/52 (38%), Positives = 25/52 (48%)
Frame = -2 / -3
Query: 588 ARPAGIFTTNFWSTTMVEANPPCVGRPSV*TSLYDQIFLLQYCSTLALQGLH 433
A P+G TT STT NPP V PS T+L + + Q+ S Q H
Sbjct: 182 APPSGTRTT*PLSTTSTSENPPWVVAPS*STALQVRTSVGQWLSCPLXQLTH 27
>gb|BI960551.1|BI960551 HVSMEn0025A03f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0025A03f, mRNA sequence
Length = 663
Score = 83.5 bits (176), Expect(3) = 1e-022
Identities = 29/55 (52%), Positives = 41/55 (74%)
Frame = +2 / +3
Query: 158 VGWAARDATGHLSPYSYTLRNTGPEDVVVKVLYCGICHTDIHQAKNHLGASKYPM 322
+GWAARDA+G LSP+ ++ R +DV ++VLYCGICHTD++ KN G + YP+
Sbjct: 207 LGWAARDASGVLSPFDFSRRAXKDDDVTIRVLYCGICHTDLYTIKNEWGTAMYPV 371
Score = 47.8 bits (98), Expect(2) = 7e-008
Identities = 26/63 (41%), Positives = 32/63 (50%)
Frame = -1 / -2
Query: 421 PNDHPDAYHVADAVLGHFGPDLHHLADHLVPRDHRIL*SPEVVLGLVDVRVADPAVEHLH 242
P++ A+ VA L D H A LVP D + +VL V+V VADPAVEH
Sbjct: 470 PDEVAHAHRVAGLELADAAADAGHDAQDLVPGDDGVHGGAPLVLDGVEVSVADPAVEHPD 291
Query: 241 HHI 233
HI
Sbjct: 290 RHI 282
Score = 39.1 bits (79), Expect = 0.064
Identities = 18/30 (60%), Positives = 18/30 (60%)
Frame = -2 / -3
Query: 318 GYFEAPRWFLAWWMSVWQIPQ*STFTTTSS 229
GY P FL SVWQIPQ*ST TSS
Sbjct: 367 GYMAVPHSFLMV*RSVWQIPQ*STLIVTSS 278
Score = 35.0 bits (70), Expect(3) = 1e-022
Identities = 13/35 (37%), Positives = 23/35 (65%)
Frame = +2 / +1
Query: 503 TDGRPTQGGFASTMVVDQKFVVKIPAGLAPEQAAP 607
T R +GGF+ M+V++ +V ++P L ++AAP
Sbjct: 559 TAARSPRGGFSDVMLVNEDYVFRVPDRLPLDKAAP 663
Score = 29.5 bits (58), Expect(2) = 7e-008
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = -2 / -3
Query: 198 GERCPVASLAAHPTTFL 148
GER P ASLAAHP+ L
Sbjct: 247 GERTPEASLAAHPSAAL 197
Score = 26.3 bits (51), Expect(3) = 1e-022
Identities = 8/25 (32%), Positives = 12/25 (48%)
Frame = +2 / +3
Query: 425 CRECSPCKANVEQYCNKKIWSYNDV 499
CR C C E YC+ + + N +
Sbjct: 474 CRSCECCGNGYENYCSGMVLTSNGI 548
>gb|BI955158.1|BI955158 HVSMEm0021K16f Hordeum vulgare green seedling EST library
HVcDNA0014 (Blumeria infected) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEm0021K16f, mRNA sequence
Length = 666
Score = 67.0 bits (140), Expect(2) = 1e-022
Identities = 25/78 (32%), Positives = 44/78 (56%)
Frame = +2 / +3
Query: 425 CRECSPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASTMVVDQKFVVKIPAGLAPEQAA 604
C C C+ + E YC+K +YN ++ D T G+++ +V + +V++P L +
Sbjct: 426 CLYCDHCRRSEENYCDKVALTYNGIFWDSSVTYSGYSNMLVEHKHCLVRLPDTLPLDADV 605
Query: 605 PLLCAGVTVYSPLKHFGL 658
PLL AG+T+YS + G+
Sbjct: 606 PLLFAGITIYSLVNEMGM 659
Score = 60.2 bits (125), Expect(2) = 1e-022
Identities = 21/54 (38%), Positives = 32/54 (59%)
Frame = +2 / +3
Query: 161 GWAARDATGHLSPYSYTLRNTGPEDVVVKVLYCGICHTDIHQAKNHLGASKYPM 322
G DA+G P+++ R +D+ +KV YCG+CHTD+H N G + YP+
Sbjct: 162 GGGGMDASGKGVPFAFKRRENRVDDITIKVHYCGMCHTDLHFINNDWGITMYPV 323
Score = 37.7 bits (76), Expect = 0.17
Identities = 20/53 (37%), Positives = 24/53 (45%)
Frame = -2 / -3
Query: 318 GYFEAPRWFLAWWMSVWQIPQ*STFTTTSSGPVFLRV*E*GERCPVASLAAHP 160
GY P+ L W SVW +PQ* T SS R+ G P AS+ P
Sbjct: 319 GYMVMPQSLLIKWRSVWHMPQ*CTLMVMSSTRFSRRLKAKGTPLPEASMPPPP 161
>gb|BU977917.1|BU977917 HA12E09r HA Hordeum vulgare subsp. vulgare cDNA clone HA12E09
5-PRIME, mRNA sequence
Length = 573
Score = 74.8 bits (157), Expect(2) = 2e-022
Identities = 28/54 (51%), Positives = 40/54 (74%)
Frame = +2 / +3
Query: 506 DGRPTQGGFASTMVVDQKFVVKIPAGLAPEQAAPLLCAGVTVYSPLKHFGLTNP 667
DG T GG++S +VV ++FVV+ P + ++ APLLCAG+TVYSP+K+ GL P
Sbjct: 24 DGTVTHGGYSSMVVVHERFVVRFPDAMPLDKGAPLLCAGITVYSPMKYHGLNVP 185
Score = 51.9 bits (107), Expect(2) = 2e-022
Identities = 25/60 (41%), Positives = 33/60 (55%)
Frame = +2 / +3
Query: 728 KAMGHHVTVISSSSKKRAEAMDHLGADAYLVXXXXXXXXXXXXXXXYIIDTVPVHHPLEP 907
KA G VTVISSS K+ EA++ LGADA++V II+TV + P+ P
Sbjct: 246 KAFGMKVTVISSSPGKKQEALERLGADAFVVSKDADEMKAAVSTMDGIINTVSANIPMAP 425
Score = 48.3 bits (99), Expect(2) = 3e-010
Identities = 26/54 (48%), Positives = 28/54 (51%)
Frame = -2 / -3
Query: 666 GFVSPKCFSGLYTVTPAHSSGAACSGARPAGIFTTNFWSTTMVEANPPCVGRPS 505
G SP F GLYTV PAHS GA S +G TT TT + PP V PS
Sbjct: 184 GTFSPWYFMGLYTVMPAHSRGAPLSSGMASGNRTTKRSCTTTMLE*PPWVTVPS 23
Score = 37.3 bits (75), Expect(2) = 3e-010
Identities = 20/32 (62%), Positives = 21/32 (65%)
Frame = -2 / -3
Query: 822 LTRYASAPRWSIASARFLDDELITVTWWPMAL 727
LT ASAP S AS F DELITVT+ P AL
Sbjct: 340 LTTNASAPSLSRASCFFPGDELITVTFIPKAL 245
>gb|BF623160.2|BF623160 HVSMEa0014P12f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0014P12f, mRNA sequence
Length = 890
Score = 89.0 bits (188), Expect(2) = 4e-022
Identities = 34/67 (50%), Positives = 45/67 (67%)
Frame = +2 / +3
Query: 122 NRMGSLASERKVVGWAARDATGHLSPYSYTLRNTGPEDVVVKVLYCGICHTDIHQAKNHL 301
+ S+ +GWAARD +G LSPYS++ R EDV +KVL+CGICHTD+H AKN
Sbjct: 45 SEQSSMEKGTPALGWAARDESGLLSPYSFSRRARKDEDVTIKVLFCGICHTDLHIAKNEW 224
Query: 302 GASKYPM 322
G + YP+
Sbjct: 225 GNALYPI 245
Score = 41.4 bits (84), Expect(2) = 5e-004
Identities = 17/25 (68%), Positives = 17/25 (68%)
Frame = -2 / -2
Query: 303 PRWFLAWWMSVWQIPQ*STFTTTSS 229
P FLA W SVWQIPQ ST TSS
Sbjct: 226 PHSFLAMWRSVWQIPQKSTLIVTSS 152
Score = 38.6 bits (78), Expect = 0.088
Identities = 23/62 (37%), Positives = 32/62 (51%)
Frame = -1 / -1
Query: 418 NDHPDAYHVADAVLGHFGPDLHHLADHLVPRDHRIL*SPEVVLGLVDVRVADPAVEHLHH 239
N+ A+ V D D+ A +L+P + + +VLG V+V VADPA EHL
Sbjct: 341 NEVAHAHRVPDLEALDARADVGDDAHNLMPGNDGVEGVAPLVLGDVEVGVADPAEEHLDR 162
Query: 238 HI 233
HI
Sbjct: 161 HI 156
Score = 36.3 bits (73), Expect(2) = 4e-022
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = +2 / +3
Query: 425 CRECSPCKANVEQYCNKKIWSYNDVYTDGRPTQGG 529
CR C C E YC+ + N V DG T GG
Sbjct: 348 CRSCGTCSKGYENYCSTLELTCNGVNYDGATTPGG 452
Score = 33.1 bits (66), Expect = 4.0
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = +1 / +2
Query: 235 CGGEGALLRDLPHGHPPGQE 294
C +GALLRDLPH P QE
Sbjct: 158 CDDQGALLRDLPHRPPHRQE 217
Score = 22.6 bits (43), Expect(2) = 5e-004
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = -2 / -2
Query: 201 *GERCPVASLAAHPT 157
*GER P +SLAA P+
Sbjct: 124 *GERRPDSSLAAQPS 80
>gb|CA025182.1|CA025182 HZ51H02r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ51H02
5-PRIME, mRNA sequence
Length = 603
Score = 64.8 bits (135), Expect(2) = 8e-022
Identities = 22/53 (41%), Positives = 38/53 (71%)
Frame = +2 / +1
Query: 425 CRECSPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASTMVVDQKFVVKIPAG 583
CR+C C + +E +C+K ++++N V TDG T+GG++S +VV +++ KIP G
Sbjct: 436 CRDCDNCNSFLENHCSKFVFTFNGVDTDGTVTKGGYSSHVVVHERYCYKIPDG 594
Score = 59.7 bits (124), Expect(2) = 8e-022
Identities = 20/53 (37%), Positives = 34/53 (64%)
Frame = +2 / +1
Query: 164 WAARDATGHLSPYSYTLRNTGPEDVVVKVLYCGICHTDIHQAKNHLGASKYPM 322
WAA+D +G LSP+++ R +DV +++ +CG+C+ D+ KN S YP+
Sbjct: 175 WAAKDPSGLLSPHTFNRRTVRHDDVSLRITHCGVCYADVIWTKNRHNDSVYPL 333
>gb|BU978527.1|BU978527 HA13H23r HA Hordeum vulgare subsp. vulgare cDNA clone HA13H23
5-PRIME, mRNA sequence
Length = 476
Score = 78.5 bits (165), Expect(2) = 4e-021
Identities = 33/75 (44%), Positives = 49/75 (65%)
Frame = +2 / +1
Query: 962 EPLSFVSPMVMLGRKAITGSFIGSIDETAEVLQFCVDKGLTSQIEVVKMGYVNEALERLE 1141
+PL + ++ G K + GS + SI ET E+L F + G+ + +EVV G VN+A+ERL
Sbjct: 238 KPLQVSAFALIGGGKTLAGSCMASISETQEMLDFAAEHGVAADVEVVGAGEVNKAMERLA 417
Query: 1142 RNDVRYRFVVDVAGS 1186
+ DVRYRFV+DV +
Sbjct: 418 KGDVRYRFVIDVGNT 462
Score = 43.7 bits (89), Expect(2) = 4e-021
Identities = 21/55 (38%), Positives = 28/55 (50%)
Frame = +2 / +1
Query: 746 VTVISSSSKKRAEAMDHLGADAYLVXXXXXXXXXXXXXXXYIIDTVPVHHPLEPY 910
VTVIS+S KR EA++ LGADA+++ II+T L PY
Sbjct: 22 VTVISTSPGKREEALERLGADAFVLSTDAAEMKAAVGTMHGIINTASAAASLHPY 186
>gb|BU999880.1|BU999880 HS17B20u HS Hordeum vulgare subsp. vulgare cDNA clone HS17B20
3-PRIME, mRNA sequence
Length = 545
Score = 75.3 bits (158), Expect(2) = 8e-021
Identities = 28/64 (43%), Positives = 42/64 (65%)
Frame = +2 / -1
Query: 995 LGRKAITGSFIGSIDETAEVLQFCVDKGLTSQIEVVKMGYVNEALERLERNDVRYRFVVD 1174
LG + ++GS G +T E++ FC + IE++K+ Y+N+ALERL DVRYRFV+D
Sbjct: 305 LGARTLSGSVTGGTKDTQEMINFCAANKIYPDIELIKIDYINQALERLVNRDVRYRFVID 126
Query: 1175 VAGS 1186
+ S
Sbjct: 125 IESS 114
Score = 46.0 bits (94), Expect(2) = 8e-021
Identities = 19/53 (35%), Positives = 28/53 (52%)
Frame = +2 / -1
Query: 752 VISSSSKKRAEAMDHLGADAYLVXXXXXXXXXXXXXXXYIIDTVPVHHPLEPY 910
V+S+S KR EA++ LGAD ++V +I+DT HP +PY
Sbjct: 545 VLSTSESKRDEAINLLGADNFVVSSDKKQMESLKSSLDFIVDTASGDHPFDPY 387
>gb|BI777594.2|BI777594 EBro04_SQ001_L05_R root, 3 week, salt-stressed, cv Optic, EBro04
Hordeum vulgare subsp. vulgare cDNA clone
EBro04_SQ001_L05 5', mRNA sequence
Length = 411
Score = 101 bits (216), Expect = 8e-021
Identities = 39/81 (48%), Positives = 52/81 (64%)
Frame = +2 / +3
Query: 425 CRECSPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASTMVVDQKFVVKIPAGLAPEQAA 604
CR C C E YC+ + + N V DG TQGGF+ +VV+Q +V+++P L+ AA
Sbjct: 72 CRSCGTCSKGYENYCSTLVLTSNGVDYDGATTQGGFSDVLVVNQDYVLRVPESLSLAGAA 251
Query: 605 PLLCAGVTVYSPLKHFGLTNP 667
PLLCAGVTVYSP+ +GL P
Sbjct: 252 PLLCAGVTVYSPMMQYGLNAP 314
Score = 58.3 bits (121), Expect = 1e-007
Identities = 35/81 (43%), Positives = 40/81 (49%)
Frame = -2 / -3
Query: 666 GFVSPKCFSGLYTVTPAHSSGAACSGARPAGIFTTNFWSTTMVEANPPCVGRPSV*TSLY 487
G + P C GLYTVTPA S+GAA + R +G T W TT PP V PS T L
Sbjct: 313 GALRPYCIIGLYTVTPAQSNGAAPARDRLSGTRRT*SWLTTSTSEKPPWVVAPS*STPLE 134
Query: 486 DQIFLLQYCSTLALQGLHSRQ 424
+ Q S LQ H RQ
Sbjct: 133 VSTRVEQ*FSYPLLQVPHERQ 71
>gb|BI777453.2|BI777453 EBro04_SQ001_E09_R root, 3 week, salt-stressed, cv Optic, EBro04
Hordeum vulgare subsp. vulgare cDNA clone
EBro04_SQ001_E09 5', mRNA sequence
Length = 432
Score = 101 bits (216), Expect = 8e-021
Identities = 39/81 (48%), Positives = 52/81 (64%)
Frame = +2 / +2
Query: 425 CRECSPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASTMVVDQKFVVKIPAGLAPEQAA 604
CR C C E YC+ + + N V DG TQGGF+ +VV+Q +V+++P L+ AA
Sbjct: 89 CRSCGTCSKGYENYCSTLVLTSNGVDYDGATTQGGFSDVLVVNQDYVLRVPESLSLAGAA 268
Query: 605 PLLCAGVTVYSPLKHFGLTNP 667
PLLCAGVTVYSP+ +GL P
Sbjct: 269 PLLCAGVTVYSPMMQYGLNAP 331
Score = 58.3 bits (121), Expect = 1e-007
Identities = 35/81 (43%), Positives = 40/81 (49%)
Frame = -2 / -1
Query: 666 GFVSPKCFSGLYTVTPAHSSGAACSGARPAGIFTTNFWSTTMVEANPPCVGRPSV*TSLY 487
G + P C GLYTVTPA S+GAA + R +G T W TT PP V PS T L
Sbjct: 330 GALRPYCIIGLYTVTPAQSNGAAPARDRLSGTRRT*SWLTTSTSEKPPWVVAPS*STPLE 151
Query: 486 DQIFLLQYCSTLALQGLHSRQ 424
+ Q S LQ H RQ
Sbjct: 150 VSTRVEQ*FSYPLLQVPHERQ 88
>gb|BF259036.2|BF259036 HVSMEf0017H13f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0017H13f, mRNA sequence
Length = 796
Score = 97.7 bits (207), Expect(2) = 1e-020
Identities = 38/81 (46%), Positives = 51/81 (62%)
Frame = +2 / +3
Query: 425 CRECSPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASTMVVDQKFVVKIPAGLAPEQAA 604
CR C C E YC+ + + N V DG TQGGF+ +VV+Q +V+++P L+ AA
Sbjct: 153 CRSCGTCSKGYENYCSTLVLTSNGVDYDGATTQGGFSDVLVVNQDYVLRVPESLSLAGAA 332
Query: 605 PLLCAGVTVYSPLKHFGLTNP 667
PLLCAGVTV SP+ +GL P
Sbjct: 333 PLLCAGVTVCSPMMQYGLNAP 395
Score = 56.1 bits (116), Expect = 5e-007
Identities = 34/81 (41%), Positives = 40/81 (49%)
Frame = -2 / -1
Query: 666 GFVSPKCFSGLYTVTPAHSSGAACSGARPAGIFTTNFWSTTMVEANPPCVGRPSV*TSLY 487
G + P C GL+TVTPA S+GAA + R +G T W TT PP V PS T L
Sbjct: 394 GALRPYCIIGLHTVTPAQSNGAAPARDRLSGTRRT*SWLTTSTSEKPPWVVAPS*STPLE 215
Query: 486 DQIFLLQYCSTLALQGLHSRQ 424
+ Q S LQ H RQ
Sbjct: 214 VSTRVEQ*FSYPLLQVPHERQ 152
Score = 23.1 bits (44), Expect(2) = 1e-020
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +2 / +3
Query: 275 DIHQAKNHLGASKYPM 322
D+H AKN G + YP+
Sbjct: 3 DLHIAKNEWGNALYPI 50
>gb|BJ545538.1|BJ545538 BJ545538 K. Sato unpublished cDNA library, cv. Akashinriki vegetative
stage leaves Hordeum vulgare subsp. vulgare cDNA clone
baak17o14 3', mRNA sequence
Length = 634
Score = 73.5 bits (154), Expect(2) = 2e-020
Identities = 30/75 (40%), Positives = 46/75 (61%)
Frame = +2 / -2
Query: 962 EPLSFVSPMVMLGRKAITGSFIGSIDETAEVLQFCVDKGLTSQIEVVKMGYVNEALERLE 1141
+P+ ++ K + GS IG + +T E+L G+T+ IEV+ YVN A+ERL
Sbjct: 417 QPIEVPPFALVARNKTLAGSCIGGMRDTQEMLDLAAKHGVTADIEVISAEYVNTAMERLA 238
Query: 1142 RNDVRYRFVVDVAGS 1186
+ DVRYRFV+D+A +
Sbjct: 237 KADVRYRFVIDIANT 193
Score = 46.4 bits (95), Expect(2) = 2e-020
Identities = 22/54 (40%), Positives = 30/54 (55%)
Frame = +2 / -2
Query: 746 VTVISSSSKKRAEAMDHLGADAYLVXXXXXXXXXXXXXXXYIIDTVPVHHPLEP 907
VTVISSS K+ EA++ LGADA++V II+TV + P+ P
Sbjct: 633 VTVISSSPGKKQEALERLGADAFVVSKDADEMKAAVSTMDGIINTVSANIPMAP 472
Score = 32.7 bits (65), Expect(2) = 2.2
Identities = 17/35 (48%), Positives = 20/35 (57%)
Frame = -2 / +2
Query: 1119 FTYPILTTSIWEVSPLSTQN*STSAVSSMLPMKLP 1015
FTY L TS+ V+P S S VS M PM+LP
Sbjct: 260 FTYSALITSMSAVTPCFAARSSISWVSLMPPMQLP 364
Score = 31.8 bits (63), Expect(2) = 7e-004
Identities = 17/26 (65%), Positives = 17/26 (65%)
Frame = -2 / +2
Query: 822 LTRYASAPRWSIASARFLDDELITVT 745
LT ASAP S AS F DELITVT
Sbjct: 557 LTTNASAPSLSRASCFFPGDELITVT 634
Score = 31.8 bits (63), Expect(2) = 7e-004
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = -1 / +1
Query: 1063 ELKHLSGLVDAADEAPRDGLPPQHHHGRHEAQGLADDAQQHELA 932
E++HL G+ AAD AP GL P + + L +A LA
Sbjct: 316 EVQHLLGVPHAADAAPGQGLVPGNQSKGRDLDRLLWEADHDHLA 447
Score = 21.7 bits (41), Expect(2) = 2.2
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -1 / +1
Query: 766 RRADHRH 746
RRADHRH
Sbjct: 613 RRADHRH 633
>gb|CA001190.1|CA001190 HS05A02u HS Hordeum vulgare subsp. vulgare cDNA clone HS05A02
3-PRIME, mRNA sequence
Length = 513
Score = 93.2 bits (197), Expect(2) = 2e-019
Identities = 38/77 (49%), Positives = 55/77 (71%)
Frame = +2 / -2
Query: 962 EPLSFVSPMVMLGRKAITGSFIGSIDETAEVLQFCVDKGLTSQIEVVKMGYVNEALERLE 1141
EPL+ + ++ G K + G+ +GS+ + +L F G+T+ +EVVKM YVN A+ERLE
Sbjct: 368 EPLALPAYAIIGGGKRLAGNGVGSVRDCQAMLDFAGKHGITADVEVVKMDYVNTAVERLE 189
Query: 1142 RNDVRYRFVVDVAGSNV 1192
+NDVRYRFV+DVAGS +
Sbjct: 188 KNDVRYRFVIDVAGSQL 138
Score = 23.1 bits (44), Expect(2) = 2e-019
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +2 / -2
Query: 869 IIDTVPVHHPLEP 907
IIDTV HPL P
Sbjct: 461 IIDTVSAGHPLVP 423
>gb|BF065362.2|BF065362 HV_CEb0012D17f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0012D17f, mRNA sequence
Length = 562
Score = 86.8 bits (183), Expect(2) = 3e-019
Identities = 33/67 (49%), Positives = 44/67 (65%)
Frame = +2 / +3
Query: 122 NRMGSLASERKVVGWAARDATGHLSPYSYTLRNTGPEDVVVKVLYCGICHTDIHQAKNHL 301
+ S+ +GWAARD +G LSPYS++ R EDV + VL+CGICHTD+H AKN
Sbjct: 168 SEQSSMEKGTPALGWAARDESGLLSPYSFSRRARKDEDVTINVLFCGICHTDLHIAKNEW 347
Query: 302 GASKYPM 322
G + YP+
Sbjct: 348 GNALYPI 368
Score = 41.4 bits (84), Expect(2) = 5e-004
Identities = 17/25 (68%), Positives = 17/25 (68%)
Frame = -2 / -1
Query: 303 PRWFLAWWMSVWQIPQ*STFTTTSS 229
P FLA W SVWQIPQ ST TSS
Sbjct: 349 PHSFLAMWRSVWQIPQNSTLIVTSS 275
Score = 36.3 bits (73), Expect = 0.43
Identities = 21/62 (33%), Positives = 32/62 (51%)
Frame = -1 / -3
Query: 418 NDHPDAYHVADAVLGHFGPDLHHLADHLVPRDHRIL*SPEVVLGLVDVRVADPAVEHLHH 239
N+ A+ V D D+ A +L+P + + +VLG V+V VADPA +H+
Sbjct: 464 NEVAHAHRVPDLEALDARADVGDDAHNLMPGNDGVEGVAPLVLGDVEVGVADPAEQHIDR 285
Query: 238 HI 233
HI
Sbjct: 284 HI 279
Score = 29.0 bits (57), Expect(2) = 3e-019
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = +2 / +3
Query: 425 CRECSPCKANVEQYCNKKIWSYNDV 499
CR C C E YC+ + + N V
Sbjct: 471 CRSCGTCSKGYENYCSTLVLTSNGV 545
Score = 22.6 bits (43), Expect(2) = 5e-004
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = -2 / -1
Query: 201 *GERCPVASLAAHPT 157
*GER P +SLAA P+
Sbjct: 247 *GERRPDSSLAAQPS 203
>gb|BJ468794.1|BJ468794 BJ468794 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd27e20 5', mRNA sequence
Length = 492
Score = 95.9 bits (203), Expect = 5e-019
Identities = 36/58 (62%), Positives = 46/58 (79%)
Frame = +2 / +2
Query: 149 RKVVGWAARDATGHLSPYSYTLRNTGPEDVVVKVLYCGICHTDIHQAKNHLGASKYPM 322
RK VG AARDA+GHLSP + T R+TG +DVV+K+LYCGICH+D+H KN ++YPM
Sbjct: 164 RKAVGLAARDASGHLSPLAITRRSTGDDDVVIKILYCGICHSDLHCIKNEWKNARYPM 337
Score = 62.5 bits (130), Expect = 6e-009
Identities = 32/59 (54%), Positives = 35/59 (59%)
Frame = -1 / -3
Query: 409 PDAYHVADAVLGHFGPDLHHLADHLVPRDHRIL*SPEVVLGLVDVRVADPAVEHLHHHI 233
PDA VA LGH DL LA LVPRDH + VL V VRVADP V++L HHI
Sbjct: 424 PDARTVAGLELGHILADLGDLAGDLVPRDHGVPGVLPFVLDAV*VRVADPTVQNLDHHI 248
Score = 59.3 bits (123), Expect = 5e-008
Identities = 31/58 (53%), Positives = 32/58 (55%)
Frame = -2 / -1
Query: 321 IGYFEAPRWFLAWWMSVWQIPQ*STFTTTSSGPVFLRV*E*GERCPVASLAAHPTTFL 148
+GY FL S WQIPQ TTSS PV LRV GER P AS AA PT FL
Sbjct: 336 MGYLAFFHSFLMQCRSEWQIPQYRILITTSSSPVLLRVMASGERWPEASRAARPTAFL 163
Score = 32.2 bits (64), Expect = 7.5
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +1 / +1
Query: 214 QEHRP*RCGGEGALLRDLPHGHPPGQEPPRGFKVSYGPWA 333
+EH *RCG + ++L DLP QE +V + PWA
Sbjct: 229 EEHWR*RCGDQDSVLWDLPL*PTLHQERMEERQVPHDPWA 348
>gb|AV836836.1|AV836836 AV836836 K. Sato unpublished cDNA library: Hordeum vulgare subsp.
vulgare seedling leaves second leaf stage Hordeum vulgare
subsp. vulgare cDNA clone basd27e20, mRNA sequence
Length = 646
Score = 67.5 bits (141), Expect(2) = 2e-018
Identities = 27/61 (44%), Positives = 39/61 (63%)
Frame = +2 / -2
Query: 1004 KAITGSFIGSIDETAEVLQFCVDKGLTSQIEVVKMGYVNEALERLERNDVRYRFVVDVAG 1183
K + GS IG + +T E+L +T+ IEV+ YVN A+ERL + DVRYRFV+D+
Sbjct: 381 KTLAGSCIGGMRDTQEMLDLAAKHDVTADIEVIDAEYVNTAMERLAKADVRYRFVIDIGN 202
Query: 1184 S 1186
+
Sbjct: 201 T 199
Score = 46.0 bits (94), Expect(2) = 2e-018
Identities = 22/54 (40%), Positives = 30/54 (55%)
Frame = +2 / -2
Query: 746 VTVISSSSKKRAEAMDHLGADAYLVXXXXXXXXXXXXXXXYIIDTVPVHHPLEP 907
VTVISSS K+ EA++ LGADA++V II+TV + P+ P
Sbjct: 639 VTVISSSPGKKQEALERLGADAFVVSKDAEEMKAAMNTMDGIINTVSANIPMAP 478
Score = 32.2 bits (64), Expect(2) = 0.15
Identities = 17/27 (62%), Positives = 18/27 (66%)
Frame = -2 / +2
Query: 822 LTRYASAPRWSIASARFLDDELITVTW 742
LT ASAP S AS F DELITVT+
Sbjct: 563 LTTNASAPNRSRASCFFPGDELITVTF 643
Score = 26.3 bits (51), Expect(2) = 9.9
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -1 / +1
Query: 1063 ELKHLSGLVDAADEAPRDGL 1004
+++HL G+ AAD AP GL
Sbjct: 322 QIQHLLGVPHAADAAPGQGL 381
Score = 26.3 bits (51), Expect(2) = 0.15
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = -2 / +2
Query: 1119 FTYPILTTSIWEVSPLSTQN*STSAVSSMLPMKLP 1015
FTY TS+ V+ S S VS M PM+LP
Sbjct: 266 FTYSASITSMSAVTSCFAARSSISWVSLMPPMQLP 370
Score = 25.8 bits (50), Expect(2) = 9.9
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = -1 / +1
Query: 784 LRALLGRRADHRHV 743
L L GRRADHRH+
Sbjct: 601 LLLLPGRRADHRHL 642
>gb|CA025064.1|CA025064 HZ51B21r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ51B21
5-PRIME, mRNA sequence
Length = 564
Score = 59.7 bits (124), Expect(2) = 2e-018
Identities = 20/53 (37%), Positives = 34/53 (64%)
Frame = +2 / +1
Query: 164 WAARDATGHLSPYSYTLRNTGPEDVVVKVLYCGICHTDIHQAKNHLGASKYPM 322
WAA+D +G LSP+++ R +DV +++ +CG+C+ D+ KN S YP+
Sbjct: 175 WAAKDPSGLLSPHTFNRRTVRHDDVSLRITHCGVCYADVIWTKNRHNDSVYPL 333
Score = 53.8 bits (111), Expect(2) = 2e-018
Identities = 18/42 (42%), Positives = 31/42 (73%)
Frame = +2 / +1
Query: 425 CRECSPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASTMVV 550
CR+C C + +E +C+K ++++N V TDG T+GG++S +VV
Sbjct: 436 CRDCDNCNSFLENHCSKFVFTFNGVDTDGTVTKGGYSSHVVV 561
>gb|AL509755.1|AL509755 AL509755 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY02M11u 3',
mRNA sequence
Length = 695
Score = 75.3 bits (158), Expect(2) = 2e-018
Identities = 28/64 (43%), Positives = 42/64 (65%)
Frame = +2 / -1
Query: 995 LGRKAITGSFIGSIDETAEVLQFCVDKGLTSQIEVVKMGYVNEALERLERNDVRYRFVVD 1174
LG + ++GS G +T E++ FC + IE++K+ Y+N+ALERL DVRYRFV+D
Sbjct: 338 LGARTLSGSVTGGTKDTQEMINFCAANKIYPDIELIKIDYINQALERLVNRDVRYRFVID 159
Query: 1175 VAGS 1186
+ S
Sbjct: 158 IESS 147
Score = 37.7 bits (76), Expect(2) = 2e-018
Identities = 15/52 (28%), Positives = 23/52 (44%)
Frame = +2 / -1
Query: 755 ISSSSKKRAEAMDHLGADAYLVXXXXXXXXXXXXXXXYIIDTVPVHHPLEPY 910
+ S S+KR + GAD ++V +I+DT HP +PY
Sbjct: 575 VPSESEKRLKQSPFFGADNFVVSSDKKQMESLKSSLDFIVDTASGDHPFDPY 420
>gb|BI949722.1|BI949722 HVSMEl0015I24f Hordeum vulgare spike EST library HVcDNA0012 (Fusarium
infected) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEl0015I24f, mRNA sequence
Length = 561
Score = 93.2 bits (197), Expect = 3e-018
Identities = 38/77 (49%), Positives = 55/77 (71%)
Frame = +2 / +1
Query: 962 EPLSFVSPMVMLGRKAITGSFIGSIDETAEVLQFCVDKGLTSQIEVVKMGYVNEALERLE 1141
EPL+ + ++ G K + G+ +GS+ + +L F G+T+ +EVVKM YVN A+ERLE
Sbjct: 34 EPLALPAYAIIGGGKRLAGNGVGSVRDCQAMLDFAGKHGITADVEVVKMDYVNTAVERLE 213
Query: 1142 RNDVRYRFVVDVAGSNV 1192
+NDVRYRFV+DVAGS +
Sbjct: 214 KNDVRYRFVIDVAGSQL 264
>gb|BG310264.2|BG310264 HVSMEc0016L11f Hordeum vulgare seedling shoot EST library HVcDNA0003
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEc0016L11f, mRNA sequence
Length = 758
Score = 93.2 bits (197), Expect = 3e-018
Identities = 38/77 (49%), Positives = 55/77 (71%)
Frame = +2 / -1
Query: 962 EPLSFVSPMVMLGRKAITGSFIGSIDETAEVLQFCVDKGLTSQIEVVKMGYVNEALERLE 1141
EPL+ + ++ G K + G+ +GS+ + +L F G+T+ +EVVKM YVN A+ERLE
Sbjct: 584 EPLALPAYAIIGGGKRLAGNGVGSVRDCQAMLDFAGKHGITADVEVVKMDYVNTAVERLE 405
Query: 1142 RNDVRYRFVVDVAGSNV 1192
+NDVRYRFV+DVAGS +
Sbjct: 404 KNDVRYRFVIDVAGSQL 354
>gb|BQ458310.1|BQ458310 HA05J23r HA Hordeum vulgare subsp. vulgare cDNA clone HA05J23
5-PRIME, mRNA sequence
Length = 427
Score = 59.7 bits (124), Expect(2) = 5e-018
Identities = 22/42 (52%), Positives = 32/42 (76%)
Frame = +2 / +2
Query: 542 MVVDQKFVVKIPAGLAPEQAAPLLCAGVTVYSPLKHFGLTNP 667
+VV ++FVV+ P + ++ APLLCAG+TVYSP+K+ GL P
Sbjct: 20 VVVHERFVVRFPDAMPLDKGAPLLCAGITVYSPMKYHGLNVP 145
Score = 51.9 bits (107), Expect(2) = 5e-018
Identities = 25/60 (41%), Positives = 33/60 (55%)
Frame = +2 / +2
Query: 728 KAMGHHVTVISSSSKKRAEAMDHLGADAYLVXXXXXXXXXXXXXXXYIIDTVPVHHPLEP 907
KA G VTVISSS K+ EA++ LGADA++V II+TV + P+ P
Sbjct: 206 KAFGMKVTVISSSPGKKQEALERLGADAFVVSKDADEMKAAVSTMDGIINTVSANIPMAP 385
Score = 42.8 bits (87), Expect(2) = 1e-008
Identities = 21/43 (48%), Positives = 23/43 (53%)
Frame = -2 / -2
Query: 666 GFVSPKCFSGLYTVTPAHSSGAACSGARPAGIFTTNFWSTTMV 538
G SP F GLYTV PAHS GA S +G TT TT +
Sbjct: 144 GTFSPWYFMGLYTVMPAHSRGAPLSSGMASGNRTTKRSCTTTI 16
Score = 37.3 bits (75), Expect(2) = 1e-008
Identities = 20/32 (62%), Positives = 21/32 (65%)
Frame = -2 / -2
Query: 822 LTRYASAPRWSIASARFLDDELITVTWWPMAL 727
LT ASAP S AS F DELITVT+ P AL
Sbjct: 300 LTTNASAPSLSRASCFFPGDELITVTFIPKAL 205
>gb|AV913778.1|AV913778 AV913778 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags23e03 5', mRNA sequence
Length = 497
Score = 91.8 bits (194), Expect = 9e-018
Identities = 36/65 (55%), Positives = 47/65 (72%)
Frame = +2 / +2
Query: 998 GRKAITGSFIGSIDETAEVLQFCVDKGLTSQIEVVKMGYVNEALERLERNDVRYRFVVDV 1177
G K + G+ +GS+ +L F G+T+ +EVVKM YVN A+ERLERNDVRYRFV+DV
Sbjct: 41 GGKRVAGNLVGSVGSCQAMLDFAAKHGITADVEVVKMDYVNTAVERLERNDVRYRFVIDV 220
Query: 1178 AGSNV 1192
AGS +
Sbjct: 221 AGSQL 235
>gb|AV921385.1|AV921385 AV921385 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags23e03 3', mRNA sequence
Length = 573
Score = 91.8 bits (194), Expect = 9e-018
Identities = 36/65 (55%), Positives = 47/65 (72%)
Frame = +2 / -2
Query: 998 GRKAITGSFIGSIDETAEVLQFCVDKGLTSQIEVVKMGYVNEALERLERNDVRYRFVVDV 1177
G K + G+ +GS+ +L F G+T+ +EVVKM YVN A+ERLERNDVRYRFV+DV
Sbjct: 551 GGKRVAGNLVGSVGSCQAMLDFAAKHGITADVEVVKMDYVNTAVERLERNDVRYRFVIDV 372
Query: 1178 AGSNV 1192
AGS +
Sbjct: 371 AGSQL 357
>gb|BI960471.1|BI960471 HVSMEn0024L10f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0024L10f,
mRNA sequence
Length = 647
Score = 91.3 bits (193), Expect = 1e-017
Identities = 35/75 (46%), Positives = 52/75 (69%)
Frame = +2 / +2
Query: 962 EPLSFVSPMVMLGRKAITGSFIGSIDETAEVLQFCVDKGLTSQIEVVKMGYVNEALERLE 1141
+PL ++ G K I G+ +G I + +L+F G+T+++EV+KM YVN ALER+
Sbjct: 8 KPLELPGDAIVPGGKGIAGNCVGGIRDCQAMLEFAAKHGITAEVEVIKMDYVNTALERVA 187
Query: 1142 RNDVRYRFVVDVAGS 1186
+NDVRYRFV+D+AGS
Sbjct: 188 KNDVRYRFVIDIAGS 232
Score = 32.7 bits (65), Expect = 5.5
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = -1 / -2
Query: 1135 PLQRXXXXXXXXXXXLGGEPLVDAELKHLSGLVDAADEAPRDGLPPQH 992
PL+R L G+ ++ E +H + DAAD P D LP +H
Sbjct: 181 PLERRVDVVHLYHLHLRGDAVLCREFQHGLAVPDAADAVPGDALPARH 38
>gb|AJ460180.1|AJ460180 AJ460180 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200039D03F1, mRNA sequence
Length = 480
Score = 90.4 bits (191), Expect = 2e-017
Identities = 33/58 (56%), Positives = 44/58 (75%)
Frame = +2 / +2
Query: 149 RKVVGWAARDATGHLSPYSYTLRNTGPEDVVVKVLYCGICHTDIHQAKNHLGASKYPM 322
RK VG AA +++GHLSP + T R+TG EDV +K+LYCGICH+D+H KN ++YPM
Sbjct: 62 RKAVGLAALESSGHLSPLAITRRSTGAEDVAIKILYCGICHSDLHSIKNEWKNARYPM 235
Score = 60.6 bits (126), Expect = 2e-008
Identities = 31/59 (52%), Positives = 36/59 (61%)
Frame = -1 / -3
Query: 409 PDAYHVADAVLGHFGPDLHHLADHLVPRDHRIL*SPEVVLGLVDVRVADPAVEHLHHHI 233
PDA+ VA GH L LA LVPRDHR+ +VL V VRVA PAVE+L+ HI
Sbjct: 322 PDAHAVAGREPGHLLAHLADLAGDLVPRDHRVPSVFPLVLNAVQVRVAYPAVENLYRHI 146
Score = 59.3 bits (123), Expect = 5e-008
Identities = 31/59 (52%), Positives = 32/59 (54%)
Frame = -2 / -1
Query: 321 IGYFEAPRWFLAWWMSVWQIPQ*STFTTTSSGPVFLRV*E*GERCPVASLAAHPTTFLS 145
IGY FL S W IPQ* F TSS PV LRV GER P S AA PT FL+
Sbjct: 234 IGYLAFFHSFLMLCRSEWHIPQ*RIFIATSSAPVLLRVMARGERWPELSSAARPTAFLA 58
>gb|BE454565.3|BE454565 HVSMEh0094E10f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0094E10f, mRNA sequence
Length = 959
Score = 83.1 bits (175), Expect(2) = 3e-017
Identities = 29/55 (52%), Positives = 41/55 (74%)
Frame = +2 / +1
Query: 158 VGWAARDATGHLSPYSYTLRNTGPEDVVVKVLYCGICHTDIHQAKNHLGASKYPM 322
+GWAARDA+G LSP+ ++ R +DV ++VLYCGICHTD++ KN G + YP+
Sbjct: 208 LGWAARDASGVLSPFDFSRRAQKDDDVTIRVLYCGICHTDLYTIKNEWGTAMYPV 372
Score = 47.8 bits (98), Expect(2) = 7e-008
Identities = 26/63 (41%), Positives = 32/63 (50%)
Frame = -1 / -3
Query: 421 PNDHPDAYHVADAVLGHFGPDLHHLADHLVPRDHRIL*SPEVVLGLVDVRVADPAVEHLH 242
P++ A+ VA L D H A LVP D + +VL V+V VADPAVEH
Sbjct: 471 PDEVAHAHRVAGLELADAAADAGHDAQDLVPGDDGVHGGAPLVLDGVEVSVADPAVEHPD 292
Query: 241 HHI 233
HI
Sbjct: 291 RHI 283
Score = 39.1 bits (79), Expect(2) = 0.050
Identities = 18/30 (60%), Positives = 18/30 (60%)
Frame = -2 / -1
Query: 318 GYFEAPRWFLAWWMSVWQIPQ*STFTTTSS 229
GY P FL SVWQIPQ*ST TSS
Sbjct: 368 GYMAVPHSFLMV*RSVWQIPQ*STLIVTSS 279
Score = 29.5 bits (58), Expect(2) = 7e-008
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = -2 / -1
Query: 198 GERCPVASLAAHPTTFL 148
GER P ASLAAHP+ L
Sbjct: 248 GERTPEASLAAHPSAAL 198
Score = 26.3 bits (51), Expect(2) = 3e-017
Identities = 8/25 (32%), Positives = 12/25 (48%)
Frame = +2 / +1
Query: 425 CRECSPCKANVEQYCNKKIWSYNDV 499
CR C C E YC+ + + N +
Sbjct: 475 CRSCECCGNGYENYCSGMVLTSNGI 549
Score = 21.7 bits (41), Expect(2) = 0.050
Identities = 10/29 (34%), Positives = 12/29 (41%)
Frame = -2 / -1
Query: 594 SGARPAGIFTTNFWSTTMVEANPPCVGRP 508
S +G T W T+M PP V P
Sbjct: 650 SSGSRSGTGTR*SWFTSMTSKKPPWVPAP 564
>gb|AV917273.1|AV917273 AV917273 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags18d14 5', mRNA sequence
Length = 546
Score = 86.3 bits (182), Expect(2) = 3e-017
Identities = 34/75 (45%), Positives = 52/75 (69%)
Frame = +2 / +3
Query: 962 EPLSFVSPMVMLGRKAITGSFIGSIDETAEVLQFCVDKGLTSQIEVVKMGYVNEALERLE 1141
+P+ S ++ G++ ++GS G + ET E++ C + G+T+ IE+V +N+AL RL
Sbjct: 132 KPVELPSFPLIFGKRTVSGSMTGGMKETQEMMDLCGEHGITADIELVSTDGINDALARLA 311
Query: 1142 RNDVRYRFVVDVAGS 1186
RNDVRYRFVVDVAG+
Sbjct: 312 RNDVRYRFVVDVAGN 356
Score = 23.1 bits (44), Expect(2) = 3e-017
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +2 / +3
Query: 866 YIIDTVPVHHPLEP 907
Y+IDTV H L P
Sbjct: 36 YVIDTVSAQHSLGP 77
>gb|AV922443.1|AV922443 AV922443 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags18d14 3', mRNA sequence
Length = 520
Score = 86.3 bits (182), Expect(2) = 3e-017
Identities = 34/75 (45%), Positives = 52/75 (69%)
Frame = +2 / -2
Query: 962 EPLSFVSPMVMLGRKAITGSFIGSIDETAEVLQFCVDKGLTSQIEVVKMGYVNEALERLE 1141
+P+ S ++ G++ ++GS G + ET E++ C + G+T+ IE+V +N+AL RL
Sbjct: 417 KPVELPSFPLIFGKRTVSGSMTGGMKETQEMMDLCGEHGITADIELVSTDGINDALARLA 238
Query: 1142 RNDVRYRFVVDVAGS 1186
RNDVRYRFVVDVAG+
Sbjct: 237 RNDVRYRFVVDVAGN 193
Score = 23.1 bits (44), Expect(2) = 3e-017
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +2 / -2
Query: 866 YIIDTVPVHHPLEP 907
Y+IDTV H L P
Sbjct: 513 YVIDTVSAQHSLGP 472
>gb|BF627817.2|BF627817 HVSMEb0005O02f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0005O02f, mRNA sequence
Length = 808
Score = 89.0 bits (188), Expect = 6e-017
Identities = 32/67 (47%), Positives = 46/67 (68%)
Frame = +2 / +3
Query: 122 NRMGSLASERKVVGWAARDATGHLSPYSYTLRNTGPEDVVVKVLYCGICHTDIHQAKNHL 301
++ S+A +GWAA+D +G LSPYS++ R +DV +KVL+CGICHTD+H KN
Sbjct: 108 SKQSSMAKGMPAIGWAAKDTSGVLSPYSFSRRAQKDDDVTIKVLFCGICHTDLHIVKNEW 287
Query: 302 GASKYPM 322
G + YP+
Sbjct: 288 GNALYPV 308
Score = 51.9 bits (107), Expect = 9e-006
Identities = 27/48 (56%), Positives = 27/48 (56%)
Frame = -2 / -1
Query: 303 PRWFLAWWMSVWQIPQ*STFTTTSSGPVFLRV*E*GERCPVASLAAHP 160
P FL W SVWQIPQ ST TSS LR *GER P S AA P
Sbjct: 289 PHSFLTIWRSVWQIPQKSTLIVTSSSF*ALREKL*GERTPDVSFAAQP 146
Score = 35.0 bits (70), Expect = 1.1
Identities = 14/21 (66%), Positives = 15/21 (71%)
Frame = +1 / +2
Query: 232 RCGGEGALLRDLPHGHPPGQE 294
RC +GALLRDLPH P QE
Sbjct: 218 RCDDQGALLRDLPHRPPYRQE 280
Score = 33.6 bits (67), Expect = 2.9
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = -1 / -3
Query: 343 DHLVPRDHRIL*SPEVVLGLVDVRVADPAVEHLHHHI 233
++L+P D + +VL ++V VADPA EHL HI
Sbjct: 329 NNLMPGDDGVEGVSPLVLDDMEVGVADPAEEHLDRHI 219
>gb|BM443343.2|BM443343 EBro02_SQ003_K20_R root, 3 week, hydroponic grown, low nitrogen, cv
Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone
EBro02_SQ003_K20 5', mRNA sequence
Length = 286
Score = 89.0 bits (188), Expect = 6e-017
Identities = 34/67 (50%), Positives = 45/67 (67%)
Frame = +2 / +3
Query: 122 NRMGSLASERKVVGWAARDATGHLSPYSYTLRNTGPEDVVVKVLYCGICHTDIHQAKNHL 301
+ S+ +GWAARD +G LSPYS++ R EDV +KVL+CGICHTD+H AKN
Sbjct: 60 SEQSSMEKGTPALGWAARDESGLLSPYSFSRRARKDEDVTIKVLFCGICHTDLHIAKNEW 239
Query: 302 GASKYPM 322
G + YP+
Sbjct: 240 GNALYPI 260
Score = 41.4 bits (84), Expect(2) = 5e-004
Identities = 17/25 (68%), Positives = 17/25 (68%)
Frame = -2 / -1
Query: 303 PRWFLAWWMSVWQIPQ*STFTTTSS 229
P FLA W SVWQIPQ ST TSS
Sbjct: 241 PHSFLAMWRSVWQIPQKSTLIVTSS 167
Score = 36.8 bits (74), Expect = 0.31
Identities = 18/38 (47%), Positives = 24/38 (63%)
Frame = -1 / -3
Query: 346 ADHLVPRDHRIL*SPEVVLGLVDVRVADPAVEHLHHHI 233
A +L+P + + +VLG V+V VADPA EHL HI
Sbjct: 284 AHNLMPGNDGVEGVAPLVLGDVEVGVADPAEEHLDRHI 171
Score = 33.1 bits (66), Expect = 4.0
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = +1 / +2
Query: 235 CGGEGALLRDLPHGHPPGQE 294
C +GALLRDLPH P QE
Sbjct: 173 CDDQGALLRDLPHRPPHRQE 232
Score = 22.6 bits (43), Expect(2) = 5e-004
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = -2 / -1
Query: 201 *GERCPVASLAAHPT 157
*GER P +SLAA P+
Sbjct: 139 *GERRPDSSLAAQPS 95
>gb|BJ544020.1|BJ544020 BJ544020 K. Sato unpublished cDNA library, cv. Akashinriki vegetative
stage leaves Hordeum vulgare subsp. vulgare cDNA clone
baak17o14 5', mRNA sequence
Length = 572
Score = 73.5 bits (154), Expect(2) = 6e-017
Identities = 30/75 (40%), Positives = 46/75 (61%)
Frame = +2 / +3
Query: 962 EPLSFVSPMVMLGRKAITGSFIGSIDETAEVLQFCVDKGLTSQIEVVKMGYVNEALERLE 1141
+P+ ++ K + GS IG + +T E+L G+T+ IEV+ YVN A+ERL
Sbjct: 204 QPIEVPPFALVARNKTLAGSCIGGMRDTQEMLDLAAKHGVTADIEVISAEYVNTAMERLA 383
Query: 1142 RNDVRYRFVVDVAGS 1186
+ DVRYRFV+D+A +
Sbjct: 384 KADVRYRFVIDIANT 428
Score = 34.5 bits (69), Expect(2) = 6e-017
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +2 / +3
Query: 773 KRAEAMDHLGADAYLVXXXXXXXXXXXXXXXYIIDTVPVHHPLEP 907
K+ EA++ LGADA++V II+TV + P+ P
Sbjct: 15 KKQEALERLGADAFVVSKDADEMKAAVSTMDGIINTVSANIPMAP 149
Score = 32.7 bits (65), Expect = 5.5
Identities = 17/35 (48%), Positives = 20/35 (57%)
Frame = -2 / -2
Query: 1119 FTYPILTTSIWEVSPLSTQN*STSAVSSMLPMKLP 1015
FTY L TS+ V+P S S VS M PM+LP
Sbjct: 361 FTYSALITSMSAVTPCFAARSSISWVSLMPPMQLP 257
>gb|BI948497.1|BI948497 HVSMEl0009N14f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0009N14f, mRNA sequence
Length = 535
Score = 88.6 bits (187), Expect = 8e-017
Identities = 33/58 (56%), Positives = 44/58 (75%)
Frame = +2 / +1
Query: 149 RKVVGWAARDATGHLSPYSYTLRNTGPEDVVVKVLYCGICHTDIHQAKNHLGASKYPM 322
+K VG AA DA+G LSP + T R+TG +DV++K+LYCGICH+D+H KN +KYPM
Sbjct: 157 KKAVGLAALDASGRLSPLAITRRSTGDDDVMIKILYCGICHSDLHSIKNDWKNAKYPM 330
Score = 66.1 bits (138), Expect = 5e-010
Identities = 33/59 (55%), Positives = 37/59 (62%)
Frame = -1 / -2
Query: 409 PDAYHVADAVLGHFGPDLHHLADHLVPRDHRIL*SPEVVLGLVDVRVADPAVEHLHHHI 233
PD VA LGH DL LA LVPRDH +L VVL V VRVADPAV++L+H I
Sbjct: 417 PDTDTVAGLELGHVLADLGDLAGDLVPRDHGVLSVLPVVLDAVQVRVADPAVQNLYHDI 241
Score = 57.4 bits (119), Expect = 2e-007
Identities = 30/57 (52%), Positives = 32/57 (56%)
Frame = -2 / -3
Query: 321 IGYFEAPRWFLAWWMSVWQIPQ*STFTTTSSGPVFLRV*E*GERCPVASLAAHPTTF 151
+GY + FL S WQIPQ F TSS PV LRV GER P AS AA PT F
Sbjct: 329 MGYLAFFQSFLMLCRSEWQIPQYRIFIMTSSSPVLLRVMASGERRPEASSAARPTAF 159
>gb|BJ470641.1|BJ470641 BJ470641 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal25k20 5', mRNA sequence
Length = 399
Score = 88.6 bits (187), Expect = 8e-017
Identities = 33/58 (56%), Positives = 44/58 (75%)
Frame = +2 / +3
Query: 149 RKVVGWAARDATGHLSPYSYTLRNTGPEDVVVKVLYCGICHTDIHQAKNHLGASKYPM 322
+K VG AA DA+G LSP + T R+TG +DV++K+LYCGICH+D+H KN +KYPM
Sbjct: 72 KKAVGLAALDASGRLSPLAITRRSTGDDDVMIKILYCGICHSDLHSIKNDWKNAKYPM 245
Score = 66.1 bits (138), Expect = 5e-010
Identities = 33/59 (55%), Positives = 37/59 (62%)
Frame = -1 / -2
Query: 409 PDAYHVADAVLGHFGPDLHHLADHLVPRDHRIL*SPEVVLGLVDVRVADPAVEHLHHHI 233
PD VA LGH DL LA LVPRDH +L VVL V VRVADPAV++L+H I
Sbjct: 332 PDTDTVAGLELGHVLADLGDLAGDLVPRDHGVLSVLPVVLDAVQVRVADPAVQNLYHDI 156
Score = 57.4 bits (119), Expect = 2e-007
Identities = 30/57 (52%), Positives = 32/57 (56%)
Frame = -2 / -3
Query: 321 IGYFEAPRWFLAWWMSVWQIPQ*STFTTTSSGPVFLRV*E*GERCPVASLAAHPTTF 151
+GY + FL S WQIPQ F TSS PV LRV GER P AS AA PT F
Sbjct: 244 MGYLAFFQSFLMLCRSEWQIPQYRIFIMTSSSPVLLRVMASGERRPEASSAARPTAF 74
>gb|CA026575.1|CA026575 HZ56E21r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ56E21
5-PRIME, mRNA sequence
Length = 433
Score = 88.6 bits (187), Expect = 8e-017
Identities = 33/58 (56%), Positives = 44/58 (75%)
Frame = +2 / +2
Query: 149 RKVVGWAARDATGHLSPYSYTLRNTGPEDVVVKVLYCGICHTDIHQAKNHLGASKYPM 322
+K VG AA DA+G LSP + T R+TG +DV++K+LYCGICH+D+H KN +KYPM
Sbjct: 158 KKAVGLAALDASGRLSPLAITRRSTGDDDVMIKILYCGICHSDLHSIKNDWKNAKYPM 331
Score = 66.1 bits (138), Expect = 5e-010
Identities = 33/59 (55%), Positives = 37/59 (62%)
Frame = -1 / -1
Query: 409 PDAYHVADAVLGHFGPDLHHLADHLVPRDHRIL*SPEVVLGLVDVRVADPAVEHLHHHI 233
PD VA LGH DL LA LVPRDH +L VVL V VRVADPAV++L+H I
Sbjct: 418 PDTDTVAGLELGHVLADLGDLAGDLVPRDHGVLSVLPVVLDAVQVRVADPAVQNLYHDI 242
Score = 57.4 bits (119), Expect = 2e-007
Identities = 30/57 (52%), Positives = 32/57 (56%)
Frame = -2 / -2
Query: 321 IGYFEAPRWFLAWWMSVWQIPQ*STFTTTSSGPVFLRV*E*GERCPVASLAAHPTTF 151
+GY + FL S WQIPQ F TSS PV LRV GER P AS AA PT F
Sbjct: 330 MGYLAFFQSFLMLCRSEWQIPQYRIFIMTSSSPVLLRVMASGERRPEASSAARPTAF 160
>gb|BI957762.1|BI957762 HVSMEn0011B06f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0011B06f, mRNA sequence
Length = 1173
Score = 55.1 bits (114), Expect(2) = 2e-016
Identities = 28/60 (46%), Positives = 32/60 (53%)
Frame = +2 / +2
Query: 728 KAMGHHVTVISSSSKKRAEAMDHLGADAYLVXXXXXXXXXXXXXXXYIIDTVPVHHPLEP 907
KA VTVISSS +KR EA++ L ADA+LV IIDTV HPL P
Sbjct: 173 KAFWMTVTVISSSPRKREEALERLCADAFLVSQDAEQMKAAAGTMDSIIDTVSAGHPLVP 352
Score = 51.0 bits (105), Expect(2) = 2e-016
Identities = 19/36 (52%), Positives = 26/36 (72%)
Frame = +2 / +2
Query: 560 FVVKIPAGLAPEQAAPLLCAGVTVYSPLKHFGLTNP 667
+ +++P L+ AAPLLCAGVTVYSP+ +GL P
Sbjct: 5 YFLRVPESLSLAGAAPLLCAGVTVYSPMMQYGLNAP 112
Score = 39.6 bits (80), Expect(2) = 2e-008
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = -2 / -1
Query: 666 GFVSPKCFSGLYTVTPAHSSGAACSGARPAG 574
G + P C GLYTVTPA S+GAA + R +G
Sbjct: 111 GALRPYCIIGLYTVTPAQSNGAAPARDRLSG 19
Score = 39.6 bits (80), Expect(2) = 2e-008
Identities = 19/26 (73%), Positives = 21/26 (80%)
Frame = -2 / -1
Query: 822 LTRYASAPRWSIASARFLDDELITVT 745
LT+ ASA R S AS+RFL DELITVT
Sbjct: 267 LTKNASAQRRSSASSRFLGDELITVT 190
>gb|BF628744.2|BF628744 HVSMEb0007K23f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0007K23f, mRNA sequence
Length = 695
Score = 86.8 bits (183), Expect = 3e-016
Identities = 32/67 (47%), Positives = 45/67 (67%)
Frame = +2 / +3
Query: 122 NRMGSLASERKVVGWAARDATGHLSPYSYTLRNTGPEDVVVKVLYCGICHTDIHQAKNHL 301
++ S+A +GWAA+D +G LSPYS+ R +DV +KVL+CGICHTD+H KN
Sbjct: 249 SKQSSMAKGMPAIGWAAKDTSGVLSPYSF*RRAQKDDDVTIKVLFCGICHTDLHIVKNEW 428
Query: 302 GASKYPM 322
G + YP+
Sbjct: 429 GNALYPV 449
Score = 51.9 bits (107), Expect = 9e-006
Identities = 27/48 (56%), Positives = 27/48 (56%)
Frame = -2 / -2
Query: 303 PRWFLAWWMSVWQIPQ*STFTTTSSGPVFLRV*E*GERCPVASLAAHP 160
P FL W SVWQIPQ ST TSS LR *GER P S AA P
Sbjct: 430 PHSFLTIWRSVWQIPQKSTLIVTSSSF*ALRQKL*GERTPDVSFAAQP 287
Score = 35.0 bits (70), Expect = 1.1
Identities = 14/21 (66%), Positives = 15/21 (71%)
Frame = +1 / +2
Query: 232 RCGGEGALLRDLPHGHPPGQE 294
RC +GALLRDLPH P QE
Sbjct: 359 RCDDQGALLRDLPHRPPYRQE 421
Score = 32.7 bits (65), Expect = 5.5
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = -1 / -1
Query: 340 HLVPRDHRIL*SPEVVLGLVDVRVADPAVEHLHHHI 233
+L+P D + +VL ++V VADPA EHL HI
Sbjct: 467 NLMPVDDGVEGVSPLVLDDMEVGVADPAEEHLDRHI 360
>gb|BG299981.1|BG299981 HVSMEa0022N07f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0022N07f, mRNA sequence
Length = 800
Score = 84.5 bits (178), Expect = 1e-015
Identities = 34/81 (41%), Positives = 46/81 (56%)
Frame = +2 / +3
Query: 425 CRECSPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASTMVVDQKFVVKIPAGLAPEQAA 604
CR C C E YC+ + + N V DG TQ GF+ + V+Q +V+++ L+ AA
Sbjct: 102 CRSCGTCSKGYENYCSTLVLTSNGVDYDGATTQRGFSDVLDVNQDYVLRVQESLSLAGAA 281
Query: 605 PLLCAGVTVYSPLKHFGLTNP 667
PLLC GVT YSP+ H L P
Sbjct: 282 PLLCTGVTEYSPMMHHCLNAP 344
Score = 39.6 bits (80), Expect = 0.047
Identities = 28/75 (37%), Positives = 34/75 (45%)
Frame = -2 / -2
Query: 648 CFSGLYTVTPAHSSGAACSGARPAGIFTTNFWSTTMVEANPPCVGRPSV*TSLYDQIFLL 469
C GLY+VTP S+GAA + R + T W T+ P V PS T L +
Sbjct: 325 CIIGLYSVTPVQSNGAAPARDRLS*TRRT*SWLTSSTSEKPLWVVAPS*STPLEVSTRVE 146
Query: 468 QYCSTLALQGLHSRQ 424
Q S LQ H RQ
Sbjct: 145 Q*FSYPLLQVPHERQ 101
>gb|AV921205.1|AV921205 AV921205 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags1g09 3', mRNA sequence
Length = 550
Score = 84.0 bits (177), Expect = 2e-015
Identities = 35/77 (45%), Positives = 51/77 (66%)
Frame = +2 / -3
Query: 962 EPLSFVSPMVMLGRKAITGSFIGSIDETAEVLQFCVDKGLTSQIEVVKMGYVNEALERLE 1141
E L + ++ K + G+ + S+ + +L F G+T+ +EVVKM YVN A+ERLE
Sbjct: 506 EXLXXXAXAIIXXGKRLXGNGVXSVRDCQAMLDFAGKHGITADVEVVKMDYVNTAVERLE 327
Query: 1142 RNDVRYRFVVDVAGSNV 1192
+NDVRYRFV+DVAGS +
Sbjct: 326 KNDVRYRFVIDVAGSQL 276
>gb|BJ550107.1|BJ550107 BJ550107 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags37c03 3', mRNA sequence
Length = 641
Score = 72.1 bits (151), Expect(2) = 9e-015
Identities = 27/61 (44%), Positives = 41/61 (67%)
Frame = +2 / -2
Query: 1004 KAITGSFIGSIDETAEVLQFCVDKGLTSQIEVVKMGYVNEALERLERNDVRYRFVVDVAG 1183
K + GS +G + ET E+L G+T+ IEV++ YVN A++RL + DVRYRFV+D+
Sbjct: 421 KTLAGSCMGGMSETQEMLDLAAKHGVTADIEVIRADYVNTAMDRLAKADVRYRFVIDIGN 242
Query: 1184 S 1186
+
Sbjct: 241 T 239
Score = 36.3 bits (73), Expect = 0.43
Identities = 18/52 (34%), Positives = 25/52 (48%)
Frame = -1 / +2
Query: 1087 GGEPLVDAELKHLSGLVDAADEAPRDGLPPQHHHGRHEAQGLADDAQQHELA 932
G ++ E++HL GL AA APR GL + E G+ +A LA
Sbjct: 338 GRHAVLGREVQHLLGLAHAAHAAPRQGLVRGNESEGRELDGILREADHDHLA 493
Score = 28.6 bits (56), Expect(2) = 9e-015
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = +2 / -2
Query: 785 AMDHLGADAYLVXXXXXXXXXXXXXXXYIIDTVPVHHPLEP 907
A+ LGADA++V II+TV + P+ P
Sbjct: 640 ALGRLGADAFVVSNNADEMKAAMSTMDGIINTVSANMPIAP 518
>gb|BQ662843.1|BQ662843 HS04G20u HS Hordeum vulgare subsp. vulgare cDNA clone HS04G20
3-PRIME, mRNA sequence
Length = 475
Score = 75.3 bits (158), Expect(2) = 2e-014
Identities = 28/64 (43%), Positives = 42/64 (65%)
Frame = +2 / -3
Query: 995 LGRKAITGSFIGSIDETAEVLQFCVDKGLTSQIEVVKMGYVNEALERLERNDVRYRFVVD 1174
LG + ++GS G +T E++ FC + IE++K+ Y+N+ALERL DVRYRFV+D
Sbjct: 305 LGARTLSGSVTGGTKDTQEMINFCAANKIYPDIELIKIDYINQALERLVNRDVRYRFVID 126
Query: 1175 VAGS 1186
+ S
Sbjct: 125 IESS 114
Score = 24.4 bits (47), Expect(2) = 2e-014
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = +2 / -3
Query: 866 YIIDTVPVHHPLEPY 910
+I+DT HP +PY
Sbjct: 431 FIVDTASGDHPFDPY 387
>gb|BJ455039.1|BJ455039 BJ455039 K. Sato unpublished cDNA library, cv. Akashinriki vegetative
stage leaves Hordeum vulgare subsp. vulgare cDNA clone
baak15m16 3', mRNA sequence
Length = 446
Score = 75.3 bits (158), Expect(2) = 2e-014
Identities = 28/64 (43%), Positives = 42/64 (65%)
Frame = +2 / -1
Query: 995 LGRKAITGSFIGSIDETAEVLQFCVDKGLTSQIEVVKMGYVNEALERLERNDVRYRFVVD 1174
LG + ++GS G +T E++ FC + IE++K+ Y+N+ALERL DVRYRFV+D
Sbjct: 269 LGARTLSGSVTGGTKDTQEMINFCAANKIYPDIELIKIDYINQALERLVNRDVRYRFVID 90
Query: 1175 VAGS 1186
+ S
Sbjct: 89 IESS 78
Score = 24.4 bits (47), Expect(2) = 2e-014
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = +2 / -1
Query: 866 YIIDTVPVHHPLEPY 910
+I+DT HP +PY
Sbjct: 395 FIVDTASGDHPFDPY 351
>gb|CB881999.1|CB881999 HM11I22w HM Hordeum vulgare subsp. vulgare cDNA clone HM11I22
3-PRIME, mRNA sequence
Length = 596
Score = 73.5 bits (154), Expect(2) = 2e-014
Identities = 30/75 (40%), Positives = 46/75 (61%)
Frame = +2 / -2
Query: 962 EPLSFVSPMVMLGRKAITGSFIGSIDETAEVLQFCVDKGLTSQIEVVKMGYVNEALERLE 1141
+P+ ++ K + GS IG + +T E+L G+T+ IEV+ YVN A+ERL
Sbjct: 424 QPIEVPPFALVARNKTLAGSCIGGMRDTQEMLDLAAKHGVTADIEVISAEYVNTAMERLA 245
Query: 1142 RNDVRYRFVVDVAGS 1186
+ DVRYRFV+D+A +
Sbjct: 244 KADVRYRFVIDIANT 200
Score = 32.7 bits (65), Expect = 5.5
Identities = 17/35 (48%), Positives = 20/35 (57%)
Frame = -2 / +3
Query: 1119 FTYPILTTSIWEVSPLSTQN*STSAVSSMLPMKLP 1015
FTY L TS+ V+P S S VS M PM+LP
Sbjct: 267 FTYSALITSMSAVTPCFAARSSISWVSLMPPMQLP 371
Score = 25.8 bits (50), Expect(2) = 2e-014
Identities = 12/39 (30%), Positives = 17/39 (43%)
Frame = +2 / -2
Query: 791 DHLGADAYLVXXXXXXXXXXXXXXXYIIDTVPVHHPLEP 907
+ LGADA++V II+TV P+ P
Sbjct: 595 ERLGADAFVVSKDADEMKAAVSTMDGIINTVSAXIPMAP 479
>gb|CX662371.1|CX662371 EST 159 Expressed sequences from Barley Hordeum vulgare subsp.
vulgare cDNA clone P159 5', mRNA sequence
Length = 512
Score = 76.7 bits (161), Expect = 3e-013
Identities = 29/52 (55%), Positives = 41/52 (78%)
Frame = +2 / +1
Query: 1031 SIDETAEVLQFCVDKGLTSQIEVVKMGYVNEALERLERNDVRYRFVVDVAGS 1186
+I + +L+F G+T+++EV+KM YVN ALERL +NDVRYRFV+D+AGS
Sbjct: 154 AIRDCQAMLEFAAKHGITAEVEVIKMDYVNTALERLAKNDVRYRFVIDIAGS 309
>gb|BF621349.2|BF621349 HVSMEa0006J13f Hordeum vulgare seedling shoot EST library HVcDNA0001
(Cold stress) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEa0006J13f, mRNA sequence
Length = 864
Score = 52.8 bits (109), Expect(2) = 4e-013
Identities = 23/69 (33%), Positives = 39/69 (56%)
Frame = +2 / +2
Query: 965 PLSFVSPMVMLGRKAITGSFIGSIDETAEVLQFCVDKGLTSQIEVVKMGYVNEALERLER 1144
PL + ++ G K + G+ +G + +L F +T+ +EVVKM VN A+ RL+
Sbjct: 278 PLQLPAYAIICGGKRVAGNLVGCVCSCHAMLDFAAKHCITADVEVVKMDSVNSAV*RLDY 457
Query: 1145 NDVRYRFVV 1171
+ +RY FV+
Sbjct: 458 D*LRYPFVI 484
Score = 46.0 bits (94), Expect(2) = 4e-013
Identities = 21/31 (67%), Positives = 24/31 (77%)
Frame = +2 / +1
Query: 728 KAMGHHVTVISSSSKKRAEAMDHLGADAYLV 820
KA G VTVISSS +KR EA+ LGADA+LV
Sbjct: 40 KAFGMTVTVISSSPRKREEAVKRLGADAFLV 132
Score = 41.4 bits (84), Expect(2) = 4e-006
Identities = 21/32 (65%), Positives = 23/32 (71%)
Frame = -2 / -2
Query: 822 LTRYASAPRWSIASARFLDDELITVTWWPMAL 727
LT+ ASAP AS+RFL DELITVT P AL
Sbjct: 134 LTKNASAPSRLTASSRFLGDELITVTVIPNAL 39
Score = 29.9 bits (59), Expect(2) = 4e-006
Identities = 17/68 (25%), Positives = 27/68 (39%)
Frame = -1 / -3
Query: 1141 LQPLQRXXXXXXXXXXXLGGEPLVDAELKHLSGLVDAADEAPRDGLPPQHHHGRHEAQGL 962
+QPL R +GG+ ++ E++H +AA E P L + Q
Sbjct: 454 IQPLNRRIDGVHLNHLNVGGDAVLRREVQHRMAAANAAHEVPGHALAAADDGVGRKLQRR 275
Query: 961 ADDAQQHE 938
A A H+
Sbjct: 274 AGRAHHHQ 251
>gb|BE602616.3|BE602616 HVSMEh0100I13f Hordeum vulgare 5-45 DAP spike EST library HVcDNA0009
(5 to 45 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEh0100I13f, mRNA sequence
Length = 423
Score = 76.2 bits (160), Expect = 4e-013
Identities = 32/35 (91%), Positives = 34/35 (97%)
Frame = +2 / +2
Query: 1088 QIEVVKMGYVNEALERLERNDVRYRFVVDVAGSNV 1192
QIEVVKM YVN+ALERLERNDVRYRFVVDVAGSN+
Sbjct: 8 QIEVVKMDYVNQALERLERNDVRYRFVVDVAGSNL 112
>gb|BQ753310.1|BQ753310 EBan01_SQ001_I10_R anther, yellow stage, no treatment, cv Optic,
EBan01 Hordeum vulgare subsp. vulgare cDNA clone
EBan01_SQ001_I10 5', mRNA sequence
Length = 509
Score = 76.2 bits (160), Expect = 4e-013
Identities = 29/61 (47%), Positives = 42/61 (68%)
Frame = +2 / +2
Query: 1004 KAITGSFIGSIDETAEVLQFCVDKGLTSQIEVVKMGYVNEALERLERNDVRYRFVVDVAG 1183
K ++GSFIG + +T E+L G+T+ IEV+ YVN A+ERL + DVRYRFV+D+
Sbjct: 170 KTLSGSFIGGMSDTQEMLDLAAKHGVTADIEVISAEYVNTAMERLAKADVRYRFVIDIGN 349
Query: 1184 S 1186
+
Sbjct: 350 T 352
Score = 34.5 bits (69), Expect = 1.5
Identities = 18/35 (51%), Positives = 20/35 (57%)
Frame = -2 / -3
Query: 1119 FTYPILTTSIWEVSPLSTQN*STSAVSSMLPMKLP 1015
FTY L TS+ V+P S S VS M PMKLP
Sbjct: 285 FTYSALITSMSAVTPCFAARSSISWVSLMPPMKLP 181
>gb|BQ759606.1|BQ759606 EBpi03_SQ002_D17_R pistil, 4 DPA, no treatment, cv Optic, EBpi03
Hordeum vulgare subsp. vulgare cDNA clone
EBpi03_SQ002_D17 5', mRNA sequence
Length = 441
Score = 76.2 bits (160), Expect = 4e-013
Identities = 29/61 (47%), Positives = 42/61 (68%)
Frame = +2 / +1
Query: 1004 KAITGSFIGSIDETAEVLQFCVDKGLTSQIEVVKMGYVNEALERLERNDVRYRFVVDVAG 1183
K ++GSFIG + +T E+L G+T+ IEV+ YVN A+ERL + DVRYRFV+D+
Sbjct: 160 KTLSGSFIGGMSDTQEMLDLAAKHGVTADIEVISAEYVNTAMERLAKADVRYRFVIDIGN 339
Query: 1184 S 1186
+
Sbjct: 340 T 342
Score = 34.5 bits (69), Expect = 1.5
Identities = 18/35 (51%), Positives = 20/35 (57%)
Frame = -2 / -2
Query: 1119 FTYPILTTSIWEVSPLSTQN*STSAVSSMLPMKLP 1015
FTY L TS+ V+P S S VS M PMKLP
Sbjct: 275 FTYSALITSMSAVTPCFAARSSISWVSLMPPMKLP 171
>gb|BJ549163.1|BJ549163 BJ549163 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags24k08 5', mRNA sequence
Length = 627
Score = 76.2 bits (160), Expect = 4e-013
Identities = 29/61 (47%), Positives = 42/61 (68%)
Frame = +2 / +1
Query: 1004 KAITGSFIGSIDETAEVLQFCVDKGLTSQIEVVKMGYVNEALERLERNDVRYRFVVDVAG 1183
K ++GSFIG + +T E+L G+T+ IEV+ YVN A+ERL + DVRYRFV+D+
Sbjct: 199 KTLSGSFIGGMSDTQEMLDLAAKHGVTADIEVISAEYVNTAMERLAKADVRYRFVIDIGN 378
Query: 1184 S 1186
+
Sbjct: 379 T 381
Score = 34.5 bits (69), Expect = 1.5
Identities = 18/35 (51%), Positives = 20/35 (57%)
Frame = -2 / -2
Query: 1119 FTYPILTTSIWEVSPLSTQN*STSAVSSMLPMKLP 1015
FTY L TS+ V+P S S VS M PMKLP
Sbjct: 314 FTYSALITSMSAVTPCFAARSSISWVSLMPPMKLP 210
>gb|AL506332.1|AL506332 AL506332 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY02M11T 5',
mRNA sequence
Length = 700
Score = 59.7 bits (124), Expect(2) = 5e-013
Identities = 20/53 (37%), Positives = 34/53 (64%)
Frame = +2 / +1
Query: 164 WAARDATGHLSPYSYTLRNTGPEDVVVKVLYCGICHTDIHQAKNHLGASKYPM 322
WAA+D +G LSP+++ R +DV +++ +CG+C+ D+ KN S YP+
Sbjct: 277 WAAKDPSGLLSPHTFNRRTVRHDDVSLRITHCGVCYADVIWTKNRHNDSVYPL 435
Score = 35.0 bits (70), Expect(2) = 5e-013
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = +2 / +1
Query: 425 CRECSPCKANVEQYCNKKIWSYNDVYTDG 511
CR+ C + +E +C+K ++++N V TDG
Sbjct: 538 CRDXDNCNSFLENHCSKFVFTFNGVDTDG 624
>gb|BQ467844.1|BQ467844 HR01B18r HR Hordeum vulgare subsp. vulgare cDNA clone HR01B18
5-PRIME, mRNA sequence
Length = 480
Score = 75.8 bits (159), Expect = 6e-013
Identities = 31/51 (60%), Positives = 39/51 (76%)
Frame = +2 / +1
Query: 1040 ETAEVLQFCVDKGLTSQIEVVKMGYVNEALERLERNDVRYRFVVDVAGSNV 1192
E +L F G+T+ +EVVKM YVN A+ERLE+NDVRYRFV+DVAGS +
Sbjct: 7 EGQAMLDFAGKHGITADVEVVKMDYVNTAVERLEKNDVRYRFVIDVAGSQL 159
>gb|BJ548462.1|BJ548462 BJ548462 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal25k20 3', mRNA sequence
Length = 600
Score = 75.8 bits (159), Expect = 6e-013
Identities = 30/63 (47%), Positives = 42/63 (66%)
Frame = +2 / -1
Query: 998 GRKAITGSFIGSIDETAEVLQFCVDKGLTSQIEVVKMGYVNEALERLERNDVRYRFVVDV 1177
G K + GS IG + +T E+L G+T+ IEV+ YVN A+ERL + DVRYRFV+D+
Sbjct: 351 GNKTLAGSCIGGMRDTQEMLDLAAKHGVTADIEVISAEYVNTAMERLAKADVRYRFVIDI 172
Query: 1178 AGS 1186
A +
Sbjct: 171 ANT 163
Score = 34.1 bits (68), Expect = 2.1
Identities = 18/41 (43%), Positives = 21/41 (51%)
Frame = -2 / +2
Query: 1119 FTYPILTTSIWEVSPLSTQN*STSAVSSMLPMKLPVMAFRP 997
FTY L TS+ V+P S S VS M PM+LP P
Sbjct: 230 FTYSALITSMSAVTPCFAARSSISWVSLMPPMQLPARVLFP 352
>gb|BQ661200.1|BQ661200 HM02G09u HM Hordeum vulgare subsp. vulgare cDNA clone HM02G09
3-PRIME, mRNA sequence
Length = 562
Score = 75.3 bits (158), Expect = 8e-013
Identities = 28/64 (43%), Positives = 42/64 (65%)
Frame = +2 / -3
Query: 995 LGRKAITGSFIGSIDETAEVLQFCVDKGLTSQIEVVKMGYVNEALERLERNDVRYRFVVD 1174
LG + ++GS G +T E++ FC + IE++K+ Y+N+ALERL DVRYRFV+D
Sbjct: 305 LGARTLSGSVTGGTKDTQEMINFCAANKIYPDIELIKIDYINQALERLVNRDVRYRFVID 126
Query: 1175 VAGS 1186
+ S
Sbjct: 125 IESS 114
>gb|CA010065.1|CA010065 HT11L08u HT Hordeum vulgare subsp. vulgare cDNA clone HT11L08
3-PRIME, mRNA sequence
Length = 276
Score = 74.8 bits (157), Expect = 1e-012
Identities = 30/46 (65%), Positives = 37/46 (80%)
Frame = +2 / -2
Query: 1055 LQFCVDKGLTSQIEVVKMGYVNEALERLERNDVRYRFVVDVAGSNV 1192
L F G+T+ +EVVKM YVN A+ERLE+NDVRYRFV+DVAGS +
Sbjct: 275 LDFAGKHGITADVEVVKMDYVNTAVERLEKNDVRYRFVIDVAGSQL 138
>gb|BI956586.1|BI956586 HVSMEn0004E16f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0004E16f, mRNA sequence
Length = 884
Score = 73.9 bits (155), Expect = 2e-012
Identities = 26/46 (56%), Positives = 35/46 (76%)
Frame = +2 / +3
Query: 185 GHLSPYSYTLRNTGPEDVVVKVLYCGICHTDIHQAKNHLGASKYPM 322
G LSP + T R+TG +DV++K+LYCGICH+D+H KN +KYPM
Sbjct: 180 GRLSPLAITRRSTGDDDVMIKILYCGICHSDLHSIKNDWKNAKYPM 317
Score = 66.1 bits (138), Expect = 5e-010
Identities = 33/59 (55%), Positives = 37/59 (62%)
Frame = -1 / -1
Query: 409 PDAYHVADAVLGHFGPDLHHLADHLVPRDHRIL*SPEVVLGLVDVRVADPAVEHLHHHI 233
PD VA LGH DL LA LVPRDH +L VVL V VRVADPAV++L+H I
Sbjct: 404 PDTDTVAGLELGHVLADLGDLAGDLVPRDHGVLSVLPVVLDAVQVRVADPAVQNLYHDI 228
Score = 43.7 bits (89), Expect = 0.003
Identities = 23/46 (50%), Positives = 25/46 (54%)
Frame = -2 / -2
Query: 321 IGYFEAPRWFLAWWMSVWQIPQ*STFTTTSSGPVFLRV*E*GERCP 184
+GY + FL S WQIPQ F TSS PV LRV GER P
Sbjct: 316 MGYLAFFQSFLMLCRSEWQIPQYRIFIMTSSSPVLLRVMASGERRP 179
>gb|BQ661990.1|BQ661990 HR01B24u HR Hordeum vulgare subsp. vulgare cDNA clone HR01B24
3-PRIME, mRNA sequence
Length = 133
Score = 73.9 bits (155), Expect = 2e-012
Identities = 33/39 (84%), Positives = 35/39 (89%)
Frame = +2 / -1
Query: 1076 GLTSQIEVVKMGYVNEALERLERNDVRYRFVVDVAGSNV 1192
GLTSQ EVVKM YVN+AL RLERN VRYRFVVDVAGSN+
Sbjct: 133 GLTSQXEVVKMEYVNQAL*RLERNYVRYRFVVDVAGSNL 17
>gb|BU977918.1|BU977918 HA12E09u HA Hordeum vulgare subsp. vulgare cDNA clone HA12E09
3-PRIME, mRNA sequence
Length = 497
Score = 73.5 bits (154), Expect = 3e-012
Identities = 30/75 (40%), Positives = 46/75 (61%)
Frame = +2 / -3
Query: 962 EPLSFVSPMVMLGRKAITGSFIGSIDETAEVLQFCVDKGLTSQIEVVKMGYVNEALERLE 1141
+P+ ++ K + GS IG + +T E+L G+T+ IEV+ YVN A+ERL
Sbjct: 423 QPIEVPPFALVARNKTLAGSCIGGMRDTQEMLDLAAKHGVTADIEVISAEYVNTAMERLA 244
Query: 1142 RNDVRYRFVVDVAGS 1186
+ DVRYRFV+D+A +
Sbjct: 243 KADVRYRFVIDIANT 199
Score = 32.7 bits (65), Expect = 5.5
Identities = 17/35 (48%), Positives = 20/35 (57%)
Frame = -2 / +2
Query: 1119 FTYPILTTSIWEVSPLSTQN*STSAVSSMLPMKLP 1015
FTY L TS+ V+P S S VS M PM+LP
Sbjct: 266 FTYSALITSMSAVTPCFAARSSISWVSLMPPMQLP 370
>gb|BQ761920.1|BQ761920 EBpi01_SQ005_D08_R pistil, 1 DPA, no treatment, cv Optic, EBpi01
Hordeum vulgare subsp. vulgare cDNA clone
EBpi01_SQ005_D08 5', mRNA sequence
Length = 383
Score = 69.8 bits (146), Expect = 4e-011
Identities = 28/57 (49%), Positives = 39/57 (68%)
Frame = +2 / +3
Query: 1016 GSFIGSIDETAEVLQFCVDKGLTSQIEVVKMGYVNEALERLERNDVRYRFVVDVAGS 1186
GS IG + +T E+L G+T+ IEV+ YVN A+ERL + DVRYRFV+D+A +
Sbjct: 3 GSCIGGMRDTQEMLDLAAKHGVTADIEVISAEYVNTAMERLAKADVRYRFVIDIANT 173
Score = 32.7 bits (65), Expect = 5.5
Identities = 17/35 (48%), Positives = 20/35 (57%)
Frame = -2 / -2
Query: 1119 FTYPILTTSIWEVSPLSTQN*STSAVSSMLPMKLP 1015
FTY L TS+ V+P S S VS M PM+LP
Sbjct: 106 FTYSALITSMSAVTPCFAARSSISWVSLMPPMQLP 2
>gb|CB880767.1|CB880767 HM07M03w HM Hordeum vulgare subsp. vulgare cDNA clone HM07M03
3-PRIME, mRNA sequence
Length = 552
Score = 69.8 bits (146), Expect = 4e-011
Identities = 28/57 (49%), Positives = 39/57 (68%)
Frame = +2 / -3
Query: 1016 GSFIGSIDETAEVLQFCVDKGLTSQIEVVKMGYVNEALERLERNDVRYRFVVDVAGS 1186
GS IG + +T E+L G+T+ IEV+ YVN A+ERL + DVRYRFV+D+A +
Sbjct: 550 GSCIGGMRDTQEMLDLAAKHGVTADIEVISAEYVNTAMERLAKADVRYRFVIDIANT 380
Score = 32.7 bits (65), Expect = 5.5
Identities = 17/35 (48%), Positives = 20/35 (57%)
Frame = -2 / +3
Query: 1119 FTYPILTTSIWEVSPLSTQN*STSAVSSMLPMKLP 1015
FTY L TS+ V+P S S VS M PM+LP
Sbjct: 447 FTYSALITSMSAVTPCFAARSSISWVSLMPPMQLP 551
>gb|CB877686.1|CB877686 HP05N08T HP Hordeum vulgare subsp. vulgare cDNA clone HP05N08
5-PRIME, mRNA sequence
Length = 266
Score = 68.9 bits (144), Expect = 7e-011
Identities = 26/48 (54%), Positives = 36/48 (75%)
Frame = +2 / +2
Query: 524 GGFASTMVVDQKFVVKIPAGLAPEQAAPLLCAGVTVYSPLKHFGLTNP 667
GGF+ +VV+Q +V+++P L+ AAPLLCAGVTVYSP+ +GL P
Sbjct: 29 GGFSDVLVVNQDYVLRVPESLSLAGAAPLLCAGVTVYSPMMQYGLNAP 172
Score = 53.8 bits (111), Expect = 2e-006
Identities = 24/48 (50%), Positives = 28/48 (58%)
Frame = -2 / -3
Query: 666 GFVSPKCFSGLYTVTPAHSSGAACSGARPAGIFTTNFWSTTMVEANPP 523
G + P C GLYTVTPA S+GAA + R +G T W TT NPP
Sbjct: 171 GALRPYCIIGLYTVTPAQSNGAAPARDRLSGTRRT*SWLTTSTSENPP 28
>gb|AL501883.1|AL501883 AL501883 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW05L10u 3', mRNA sequence
Length = 633
Score = 68.0 bits (142), Expect = 1e-010
Identities = 26/61 (42%), Positives = 39/61 (63%)
Frame = +2 / -2
Query: 998 GRKAITGSFIGSIDETAEVLQFCVDKGLTSQIEVVKMGYVNEALERLERNDVRYRFVVDV 1177
G + I+GS G +++ E++ C + +T IE+V +N A RL RNDVRYRFV+D+
Sbjct: 503 GNRTISGSITGGMNDHQEMMDLCGEHNITCDIELVSNDGINNAFARLARNDVRYRFVIDI 324
Query: 1178 A 1180
A
Sbjct: 323 A 321
>gb|BU994127.1|BU994127 HM05N11r HM Hordeum vulgare subsp. vulgare cDNA clone HM05N11
5-PRIME, mRNA sequence
Length = 480
Score = 67.5 bits (141), Expect = 2e-010
Identities = 27/61 (44%), Positives = 39/61 (63%)
Frame = +2 / +1
Query: 1004 KAITGSFIGSIDETAEVLQFCVDKGLTSQIEVVKMGYVNEALERLERNDVRYRFVVDVAG 1183
K + GS IG + +T E+L +T+ IEV+ YVN A+ERL + DVRYRFV+D+
Sbjct: 73 KTLAGSCIGGMRDTQEMLDLAAKHDVTADIEVIDAEYVNTAMERLAKADVRYRFVIDIGN 252
Query: 1184 S 1186
+
Sbjct: 253 T 255
>gb|CB880789.1|CB880789 HM07N11w HM Hordeum vulgare subsp. vulgare cDNA clone HM07N11
3-PRIME, mRNA sequence
Length = 479
Score = 67.5 bits (141), Expect = 2e-010
Identities = 27/61 (44%), Positives = 39/61 (63%)
Frame = +2 / -3
Query: 1004 KAITGSFIGSIDETAEVLQFCVDKGLTSQIEVVKMGYVNEALERLERNDVRYRFVVDVAG 1183
K + GS IG + +T E+L +T+ IEV+ YVN A+ERL + DVRYRFV+D+
Sbjct: 408 KTLAGSCIGGMRDTQEMLDLAAKHDVTADIEVIDAEYVNTAMERLAKADVRYRFVIDIGN 229
Query: 1184 S 1186
+
Sbjct: 228 T 226
>gb|BQ761570.1|BQ761570 EBem10_SQ001_K03_R embryo, 2 Day germination, no treatment, cv Optic,
EBem10 Hordeum vulgare subsp. vulgare cDNA clone
EBem10_SQ001_K03 5', mRNA sequence
Length = 118
Score = 63.8 bits (133), Expect = 2e-009
Identities = 25/31 (80%), Positives = 29/31 (93%)
Frame = +2 / +1
Query: 1091 IEVVKMGYVNEALERLERNDVRYRFVVDVAG 1183
+EVVKM YVN A+ERLE+NDVRYRFV+DVAG
Sbjct: 4 VEVVKMDYVNTAVERLEKNDVRYRFVIDVAG 96
>gb|BM097022.2|BM097022 EBpi07_SQ002_C11_R pistil, 12 DPA, no treatment, cv Optic, EBpi07
Hordeum vulgare subsp. vulgare cDNA clone
EBpi07_SQ002_C11 5', mRNA sequence
Length = 322
Score = 62.0 bits (129), Expect = 8e-009
Identities = 25/27 (92%), Positives = 27/27 (100%)
Frame = +2 / +2
Query: 1112 YVNEALERLERNDVRYRFVVDVAGSNV 1192
YVN+ALERLERNDVRYRFVVDVAGSN+
Sbjct: 2 YVNQALERLERNDVRYRFVVDVAGSNL 82
>gb|BI956152.1|BI956152 HVSMEm0025N07f Hordeum vulgare green seedling EST library
HVcDNA0014 (Blumeria infected) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEm0025N07f, mRNA sequence
Length = 685
Score = 59.7 bits (124), Expect = 4e-008
Identities = 20/53 (37%), Positives = 34/53 (64%)
Frame = +2 / +1
Query: 164 WAARDATGHLSPYSYTLRNTGPEDVVVKVLYCGICHTDIHQAKNHLGASKYPM 322
WAA+D +G LSP+++ R +DV +++ +CG+C+ D+ KN S YP+
Sbjct: 274 WAAKDPSGLLSPHTFNRRTVRHDDVSLRITHCGVCYADVIWTKNRHNDSVYPL 432
>gb|BQ467644.1|BQ467644 HS04G20r HS Hordeum vulgare subsp. vulgare cDNA clone HS04G20
5-PRIME, mRNA sequence
Length = 411
Score = 59.7 bits (124), Expect = 4e-008
Identities = 20/53 (37%), Positives = 34/53 (64%)
Frame = +2 / +2
Query: 164 WAARDATGHLSPYSYTLRNTGPEDVVVKVLYCGICHTDIHQAKNHLGASKYPM 322
WAA+D +G LSP+++ R +DV +++ +CG+C+ D+ KN S YP+
Sbjct: 227 WAAKDPSGLLSPHTFNRRTVRHDDVSLRITHCGVCYADVIWTKNRHNDSVYPL 385
>gb|CA004275.1|CA004275 HS17B20r HS Hordeum vulgare subsp. vulgare cDNA clone HS17B20
5-PRIME, mRNA sequence
Length = 413
Score = 59.7 bits (124), Expect = 4e-008
Identities = 20/53 (37%), Positives = 34/53 (64%)
Frame = +2 / +2
Query: 164 WAARDATGHLSPYSYTLRNTGPEDVVVKVLYCGICHTDIHQAKNHLGASKYPM 322
WAA+D +G LSP+++ R +DV +++ +CG+C+ D+ KN S YP+
Sbjct: 227 WAAKDPSGLLSPHTFNRRTVRHDDVSLRITHCGVCYADVIWTKNRHNDSVYPL 385
>gb|CA012143.1|CA012143 HT04J04r HT Hordeum vulgare subsp. vulgare cDNA clone HT04J04
5-PRIME, mRNA sequence
Length = 442
Score = 59.7 bits (124), Expect = 4e-008
Identities = 20/53 (37%), Positives = 34/53 (64%)
Frame = +2 / +2
Query: 164 WAARDATGHLSPYSYTLRNTGPEDVVVKVLYCGICHTDIHQAKNHLGASKYPM 322
WAA+D +G LSP+++ R +DV +++ +CG+C+ D+ KN S YP+
Sbjct: 272 WAAKDPSGLLSPHTFNRRTVRHDDVSLRITHCGVCYADVIWTKNRHNDSVYPL 430
>gb|CA014958.1|CA014958 HT12N15r HT Hordeum vulgare subsp. vulgare cDNA clone HT12N15
5-PRIME, mRNA sequence
Length = 632
Score = 39.6 bits (80), Expect(2) = 2e-007
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +2 / +1
Query: 224 GPEDVVVKVLYCGICHTDIH 283
GP++V+V + Y G+CHTD+H
Sbjct: 148 GPDEVLVNIKYSGVCHTDLH 207
Score = 39.1 bits (79), Expect(2) = 2e-007
Identities = 18/50 (36%), Positives = 23/50 (46%)
Frame = +2 / +1
Query: 509 GRPTQGGFASTMVVDQKFVVKIPAGLAPEQAAPLLCAGVTVYSPLKHFGL 658
G G F + V +IP AP+LCAG+TVY LK G+
Sbjct: 415 GYTVDGTFQQYCIAKAAHVARIPKECDLAAIAPVLCAGITVYKGLKESGV 564
>gb|BQ768475.1|BQ768475 EBro08_SQ011_G19_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ011_G19 5', mRNA sequence
Length = 421
Score = 47.8 bits (98), Expect(3) = 1e-006
Identities = 21/31 (67%), Positives = 25/31 (80%)
Frame = +2 / +2
Query: 728 KAMGHHVTVISSSSKKRAEAMDHLGADAYLV 820
KA G VTVISSS +KR EA++ LGADA+LV
Sbjct: 8 KAFGMTVTVISSSPRKREEALERLGADAFLV 100
Score = 46.4 bits (95), Expect = 4e-004
Identities = 23/32 (71%), Positives = 25/32 (78%)
Frame = -2 / -2
Query: 822 LTRYASAPRWSIASARFLDDELITVTWWPMAL 727
LT+ ASAPR S AS+RFL DELITVT P AL
Sbjct: 102 LTKNASAPRRSSASSRFLGDELITVTVIPNAL 7
Score = 23.1 bits (44), Expect(3) = 1e-006
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +2 / +1
Query: 869 IIDTVPVHHPLEP 907
IIDTV HPL P
Sbjct: 244 IIDTVSAGHPLVP 282
Score = 22.1 bits (42), Expect(3) = 1e-006
Identities = 8/25 (32%), Positives = 16/25 (64%)
Frame = +2 / +1
Query: 962 EPLSFVSPMVMLGRKAITGSFIGSI 1036
EPL+ + ++ G K + G+ +GS+
Sbjct: 337 EPLALPAYAIIGGGKRLAGNGVGSV 411
>gb|AL500806.1|AL500806 AL500806 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW01P08u 3', mRNA sequence
Length = 248
Score = 54.2 bits (112), Expect = 2e-006
Identities = 21/29 (72%), Positives = 25/29 (86%)
Frame = +2 / -3
Query: 1106 MGYVNEALERLERNDVRYRFVVDVAGSNV 1192
M YVN A+ERLE+NDVRYRFV+D AGS +
Sbjct: 246 MDYVNTAVERLEKNDVRYRFVIDXAGSQL 160
>gb|BI956379.1|BI956379 HVSMEn0003A09f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0003A09f, mRNA sequence
Length = 482
Score = 51.9 bits (107), Expect = 9e-006
Identities = 25/53 (47%), Positives = 29/53 (54%)
Frame = +2 / +3
Query: 749 TVISSSSKKRAEAMDHLGADAYLVXXXXXXXXXXXXXXXYIIDTVPVHHPLEP 907
TVISSS +KR EA+ LGADA+LV IIDTV HP+ P
Sbjct: 3 TVISSSPRKREEAVKRLGADAFLVSQDPEQMKAAAGTMDGIIDTVSAGHPIVP 161
Score = 35.9 bits (72), Expect = 0.59
Identities = 17/25 (68%), Positives = 19/25 (76%)
Frame = -2 / -2
Query: 822 LTRYASAPRWSIASARFLDDELITV 748
LT+ ASAP AS+RFL DELITV
Sbjct: 76 LTKNASAPSRLTASSRFLGDELITV 2
>gb|BF630320.3|BF630320 HVSMEb0008L19f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0008L19f, mRNA sequence
Length = 489
Score = 36.8 bits (74), Expect(2) = 0.001
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = -3 / -1
Query: 296 GSWPGGCPCGRSRSRAPSPPH 234
G+WP PCG SR+ APSPP+
Sbjct: 117 GAWPWQ*PCGCSRTWAPSPPY 55
Score = 29.0 bits (57), Expect(2) = 0.001
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = -3 / -1
Query: 1316 EAERCTQTRPERTLHAAHRRGSTRRRGA 1233
+A RC P R HAA RR R GA
Sbjct: 462 KAPRCISAAPRRQPHAARRRAPRRP*GA 379
>gb|BE214416.2|BE214416 HV_CEb0003G07f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0003G07f, mRNA sequence
Length = 710
Score = 36.8 bits (74), Expect(2) = 0.001
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = -3 / -1
Query: 296 GSWPGGCPCGRSRSRAPSPPH 234
G+WP PCG SR+ APSPP+
Sbjct: 227 GAWPWQ*PCGCSRTWAPSPPY 165
Score = 29.0 bits (57), Expect(2) = 0.001
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = -3 / -1
Query: 1319 KEAERCTQTRPERTLHAAHRRGSTRRRGA 1233
++A RC P R HAA RR R GA
Sbjct: 575 EKAPRCISAAPRRQPHAAXRRAPRRP*GA 489
>gb|BE215378.1|BE215378 HV_CEb0006K05f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0006K05f, mRNA sequence
Length = 677
Score = 27.6 bits (54), Expect(3) = 0.009
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +3 / +3
Query: 330 GTRWSARWWRSGP 368
GTRW R WRS P
Sbjct: 222 GTRWCRRSWRSAP 260
Score = 25.4 bits (49), Expect(3) = 0.009
Identities = 12/33 (36%), Positives = 15/33 (45%)
Frame = +2 / +2
Query: 530 FASTMVVDQKFVVKIPAGLAPEQAAPLLCAGVT 628
F+ VVD VVK+ + P A L C T
Sbjct: 404 FSEYTVVDVTQVVKVDPAVPPSTACLLSCGATT 502
Score = 22.6 bits (43), Expect(3) = 0.009
Identities = 6/17 (35%), Positives = 10/17 (58%)
Frame = +2 / +2
Query: 425 CRECSPCKANVEQYCNK 475
C EC+ C ++ C+K
Sbjct: 254 CAECADCMSSRSNVCSK 304
>gb|BF619996.2|BF619996 HVSMEc0009P09f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0009P09f, mRNA sequence
Length = 617
Score = 27.6 bits (54), Expect(3) = 0.039
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +3 / +3
Query: 330 GTRWSARWWRSGP 368
GTRW R WRS P
Sbjct: 324 GTRWCRRSWRSAP 362
Score = 23.1 bits (44), Expect(3) = 0.039
Identities = 11/33 (33%), Positives = 14/33 (42%)
Frame = +2 / +2
Query: 530 FASTMVVDQKFVVKIPAGLAPEQAAPLLCAGVT 628
F+ VVD VVK+ + P L C T
Sbjct: 506 FSEYTVVDVTQVVKVDPAVPPXTGCLLSCGATT 604
Score = 22.6 bits (43), Expect(3) = 0.039
Identities = 6/17 (35%), Positives = 10/17 (58%)
Frame = +2 / +2
Query: 425 CRECSPCKANVEQYCNK 475
C EC+ C ++ C+K
Sbjct: 356 CAECADCMSSRSNVCSK 406
>gb|BE213985.3|BE213985 HV_CEb0001N07f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0001N07f, mRNA sequence
Length = 276
Score = 38.6 bits (78), Expect = 0.088
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = +2 / -3
Query: 1145 NDVRYRFVVDVAGSNV 1192
NDVRYRFVVDVAGSN+
Sbjct: 274 NDVRYRFVVDVAGSNL 227
>gb|BG309331.2|BG309331 HVSMEc0007L18f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0007L18f, mRNA sequence
Length = 863
Score = 37.7 bits (76), Expect = 0.17
Identities = 14/27 (51%), Positives = 14/27 (51%)
Frame = -3 / -2
Query: 305 PRGGSWPGGCPCGRSRSRAPSPPHLQG 225
PR WPG C S S PSPPH G
Sbjct: 574 PRASRWPGSCLYPASPSHPPSPPHRVG 494
>gb|CA030260.1|CA030260 HX06I18r HX Hordeum vulgare subsp. vulgare cDNA clone HX06I18
5-PRIME, mRNA sequence
Length = 627
Score = 33.1 bits (66), Expect(2) = 0.27
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -3 / -2
Query: 296 GSWPGGCPCGRSRSRAPS 243
GSWPGG PC R PS
Sbjct: 59 GSWPGGAPCACPRRTCPS 6
Score = 24.4 bits (47), Expect(2) = 0.27
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = -3 / -2
Query: 770 WTTS*SPSRGGPWPWL 723
W S P RGGP WL
Sbjct: 401 WLRSWPPWRGGPSAWL 354
>gb|BF622624.2|BF622624 HVSMEa0007G07f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0007G07f, mRNA sequence
Length = 690
Score = 33.1 bits (66), Expect(2) = 0.30
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -3 / -2
Query: 575 GSSPQTSGRRPWWRRIHPAWAVHQ 504
G+ P SGRRP+WRR + AV Q
Sbjct: 629 GTVPLNSGRRPFWRRAFTSRAVFQ 558
Score = 24.4 bits (47), Expect(2) = 0.30
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -3 / -1
Query: 296 GSWPGGCPCGRSRSRAPSP 240
GS G CP R++ AP+P
Sbjct: 570 GSVSGCCPLARAQGFAPAP 514
>gb|BF618556.2|BF618556 HVSMEc0006C03f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0006C03f, mRNA sequence
Length = 557
Score = 36.8 bits (74), Expect = 0.31
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = -3 / -3
Query: 296 GSWPGGCPCGRSRSRAPSPPH 234
G+WP PCG SR+ APSPP+
Sbjct: 240 GAWPWQ*PCGCSRTWAPSPPY 178
>gb|BQ754199.1|BQ754199 EBca01_SQ003_C13_R carpel, pre-anthesis, no treatment, cv Optic,
EBca01 Hordeum vulgare subsp. vulgare cDNA clone
EBca01_SQ003_C13 5', mRNA sequence
Length = 338
Score = 36.8 bits (74), Expect = 0.31
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +2 / +2
Query: 203 SYTLRNTGPEDVVVKVLYCGICHTDIHQAKNHL 301
S R T +V+VK CG+CH+D+H K L
Sbjct: 233 SSACRATKAGEVLVKTKACGVCHSDLHVMKGEL 331
>gb|CK125480.1|CK125480 BES1824108k12 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010K128 5-PRIME, mRNA sequence
Length = 767
Score = 29.0 bits (57), Expect(2) = 0.33
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -3 / -2
Query: 296 GSWPGGCPCGRSR 258
GSWPGG PC R
Sbjct: 379 GSWPGGAPCACPR 341
Score = 28.6 bits (56), Expect(2) = 0.33
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -3 / -2
Query: 566 PQTSGRRPWWRRIHPAW 516
P + RRPWW + P+W
Sbjct: 715 PAWAWRRPWWSWLVPSW 665
>gb|CK125479.1|CK125479 BES1824108k11 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010K118 5-PRIME, mRNA sequence
Length = 800
Score = 29.0 bits (57), Expect(2) = 0.34
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -3 / -2
Query: 296 GSWPGGCPCGRSR 258
GSWPGG PC R
Sbjct: 358 GSWPGGAPCACPR 320
Score = 28.6 bits (56), Expect(2) = 0.34
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -3 / -2
Query: 566 PQTSGRRPWWRRIHPAW 516
P + RRPWW + P+W
Sbjct: 694 PAWAWRRPWWSWLVPSW 644
>gb|BU977101.1|BU977101 HA10N14r HA Hordeum vulgare subsp. vulgare cDNA clone HA10N14
5-PRIME, mRNA sequence
Length = 364
Score = 34.1 bits (68), Expect(2) = 0.52
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = -3 / -2
Query: 305 PRGGSWPGGCPCGRSRSRAPSPP 237
PRGG+ PG P R S +PSPP
Sbjct: 102 PRGGTQPGCAPPSRRASPSPSPP 34
Score = 21.7 bits (41), Expect(2) = 0.52
Identities = 11/33 (33%), Positives = 14/33 (42%)
Frame = -1 / -1
Query: 1084 GEPLVDAELKHLSGLVDAADEAPRDGLPPQHHH 986
G ++ EL L LVD + P P HH
Sbjct: 301 GYKYLNLELLELVVLVDGLGDVPGAAHPLGEHH 203
>gb|BU977102.1|BU977102 HA10N14u HA Hordeum vulgare subsp. vulgare cDNA clone HA10N14
3-PRIME, mRNA sequence
Length = 364
Score = 34.1 bits (68), Expect(2) = 0.52
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = -3 / +2
Query: 305 PRGGSWPGGCPCGRSRSRAPSPP 237
PRGG+ PG P R S +PSPP
Sbjct: 263 PRGGTQPGCAPPSRRASPSPSPP 331
Score = 21.7 bits (41), Expect(2) = 0.52
Identities = 11/33 (33%), Positives = 14/33 (42%)
Frame = -1 / +1
Query: 1084 GEPLVDAELKHLSGLVDAADEAPRDGLPPQHHH 986
G ++ EL L LVD + P P HH
Sbjct: 64 GYKYLNLELLELVVLVDGLGDVPGAAHPLGEHH 162
>gb|BQ463261.1|BQ463261 HI04J02r HI Hordeum vulgare subsp. vulgare cDNA clone HI04J02
5-PRIME, mRNA sequence
Length = 518
Score = 31.8 bits (63), Expect(2) = 0.55
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -3 / -1
Query: 296 GSWPGGCPCGRSRSRAPS 243
GSWPGG PC R PS
Sbjct: 59 GSWPGGAPCACPRRTWPS 6
Score = 24.4 bits (47), Expect(2) = 0.55
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = -3 / -1
Query: 770 WTTS*SPSRGGPWPWL 723
W S P RGGP WL
Sbjct: 401 WLRSWPPWRGGPSAWL 354
>gb|BJ460562.1|BJ460562 BJ460562 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak41e16 3', mRNA sequence
Length = 453
Score = 34.1 bits (68), Expect(2) = 0.65
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = -3 / +3
Query: 305 PRGGSWPGGCPCGRSRSRAPSPP 237
PRGG+ PG P R S +PSPP
Sbjct: 285 PRGGTQPGCAPPSRRASPSPSPP 353
Score = 21.7 bits (41), Expect(2) = 0.65
Identities = 11/33 (33%), Positives = 14/33 (42%)
Frame = -1 / +1
Query: 1084 GEPLVDAELKHLSGLVDAADEAPRDGLPPQHHH 986
G ++ EL L LVD + P P HH
Sbjct: 31 GYKYLNLELLELVVLVDGLGDVPGAAHPLGEHH 129
>gb|BG309881.1|BG309881 HVSMEc0013K17f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0013K17f, mRNA sequence
Length = 840
Score = 26.3 bits (51), Expect(3) = 0.66
Identities = 8/26 (30%), Positives = 15/26 (57%)
Frame = +2 / -3
Query: 437 SPCKANVEQYCNKKIWSYNDVYTDGR 514
SPC ++ +Y +K W Y+ ++ R
Sbjct: 280 SPCSRSIPEYHLRKKWPYSVLHVPSR 203
Score = 24.9 bits (48), Expect(3) = 0.66
Identities = 16/51 (31%), Positives = 22/51 (43%)
Frame = +2 / -1
Query: 2 RRSRGFLSQLRRRLATPPCAGSSPSPATRSVVVVPAAPIPNRMGSLASERK 154
+R+R RRR + CAG+ A R P A P R + A R+
Sbjct: 741 QRTRRTADSCRRRTGSGSCAGT*TRSARRPRRCGPLARTPARRIAPARSRR 589
Score = 23.5 bits (45), Expect(3) = 0.66
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +1 / -2
Query: 259 RDLPHGHPPGQEPPRG 306
R++ HG PGQ P G
Sbjct: 482 REIEHGAVPGQHPGDG 435
>gb|BM097131.2|BM097131 EBpi07_SQ002_I02_R pistil, 12 DPA, no treatment, cv Optic, EBpi07
Hordeum vulgare subsp. vulgare cDNA clone
EBpi07_SQ002_I02 5', mRNA sequence
Length = 467
Score = 34.1 bits (68), Expect(2) = 0.67
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = -3 / -1
Query: 305 PRGGSWPGGCPCGRSRSRAPSPP 237
PRGG+ PG P R S +PSPP
Sbjct: 179 PRGGTQPGCAPPSRRASPSPSPP 111
Score = 21.7 bits (41), Expect(2) = 0.67
Identities = 11/33 (33%), Positives = 14/33 (42%)
Frame = -1 / -2
Query: 1084 GEPLVDAELKHLSGLVDAADEAPRDGLPPQHHH 986
G ++ EL L LVD + P P HH
Sbjct: 433 GYKYLNLELLELVVLVDGLGDVPGAAHPLGEHH 335
>gb|BJ453015.1|BJ453015 BJ453015 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak41e16 5', mRNA sequence
Length = 477
Score = 34.1 bits (68), Expect(2) = 0.68
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = -3 / -1
Query: 305 PRGGSWPGGCPCGRSRSRAPSPP 237
PRGG+ PG P R S +PSPP
Sbjct: 150 PRGGTQPGCAPPSRRASPSPSPP 82
Score = 21.7 bits (41), Expect(2) = 0.68
Identities = 11/33 (33%), Positives = 14/33 (42%)
Frame = -1 / -2
Query: 1084 GEPLVDAELKHLSGLVDAADEAPRDGLPPQHHH 986
G ++ EL L LVD + P P HH
Sbjct: 404 GYKYLNLELLELVVLVDGLGDVPGAAHPLGEHH 306
>gb|BJ461265.1|BJ461265 BJ461265 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak44d21 3', mRNA sequence
Length = 477
Score = 34.1 bits (68), Expect(2) = 0.68
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = -3 / +3
Query: 305 PRGGSWPGGCPCGRSRSRAPSPP 237
PRGG+ PG P R S +PSPP
Sbjct: 285 PRGGTQPGCAPPSRRASPSPSPP 353
Score = 21.7 bits (41), Expect(2) = 0.68
Identities = 11/33 (33%), Positives = 14/33 (42%)
Frame = -1 / +1
Query: 1084 GEPLVDAELKHLSGLVDAADEAPRDGLPPQHHH 986
G ++ EL L LVD + P P HH
Sbjct: 31 GYKYLNLELLELVVLVDGLGDVPGAAHPLGEHH 129
>gb|BQ463679.1|BQ463679 HG01B14r HG Hordeum vulgare subsp. vulgare cDNA clone HG01B14
5-PRIME, mRNA sequence
Length = 501
Score = 34.1 bits (68), Expect(2) = 0.72
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = -3 / -2
Query: 305 PRGGSWPGGCPCGRSRSRAPSPP 237
PRGG+ PG P R S +PSPP
Sbjct: 221 PRGGTQPGCAPPSRRASPSPSPP 153
Score = 21.7 bits (41), Expect(2) = 0.72
Identities = 11/33 (33%), Positives = 14/33 (42%)
Frame = -1 / -3
Query: 1084 GEPLVDAELKHLSGLVDAADEAPRDGLPPQHHH 986
G ++ EL L LVD + P P HH
Sbjct: 475 GYKYLNLELLELVVLVDGLGDVPGAAHPLGEHH 377
>gb|BU996263.1|BU996263 HM13A22r HM Hordeum vulgare subsp. vulgare cDNA clone HM13A22
5-PRIME, mRNA sequence
Length = 500
Score = 34.1 bits (68), Expect(2) = 0.72
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = -3 / -3
Query: 305 PRGGSWPGGCPCGRSRSRAPSPP 237
PRGG+ PG P R S +PSPP
Sbjct: 78 PRGGTQPGCAPPSRRASPSPSPP 10
Score = 21.7 bits (41), Expect(2) = 0.72
Identities = 11/33 (33%), Positives = 14/33 (42%)
Frame = -1 / -1
Query: 1084 GEPLVDAELKHLSGLVDAADEAPRDGLPPQHHH 986
G ++ EL L LVD + P P HH
Sbjct: 332 GYKYLNLELLELVVLVDGLGDVPGAAHPLGEHH 234
>gb|BU972886.1|BU972886 HB23A18r BC Hordeum vulgare subsp. vulgare cDNA clone HB23A18
5-PRIME, mRNA sequence
Length = 510
Score = 34.1 bits (68), Expect(2) = 0.73
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = -3 / -3
Query: 305 PRGGSWPGGCPCGRSRSRAPSPP 237
PRGG+ PG P R S +PSPP
Sbjct: 88 PRGGTQPGCAPPSRRASPSPSPP 20
Score = 21.7 bits (41), Expect(2) = 0.73
Identities = 11/33 (33%), Positives = 14/33 (42%)
Frame = -1 / -1
Query: 1084 GEPLVDAELKHLSGLVDAADEAPRDGLPPQHHH 986
G ++ EL L LVD + P P HH
Sbjct: 342 GYKYLNLELLELVVLVDGLGDVPGAAHPLGEHH 244
>gb|BJ453724.1|BJ453724 BJ453724 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak44d21 5', mRNA sequence
Length = 531
Score = 34.1 bits (68), Expect(2) = 0.76
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = -3 / -3
Query: 305 PRGGSWPGGCPCGRSRSRAPSPP 237
PRGG+ PG P R S +PSPP
Sbjct: 205 PRGGTQPGCAPPSRRASPSPSPP 137
Score = 21.7 bits (41), Expect(2) = 0.76
Identities = 11/33 (33%), Positives = 14/33 (42%)
Frame = -1 / -1
Query: 1084 GEPLVDAELKHLSGLVDAADEAPRDGLPPQHHH 986
G ++ EL L LVD + P P HH
Sbjct: 459 GYKYLNLELLELVVLVDGLGDVPGAAHPLGEHH 361
>gb|BF066150.3|BF066150 HV_CEb0014P20f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0014P20f, mRNA sequence
Length = 537
Score = 34.1 bits (68), Expect(2) = 0.77
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = -3 / -3
Query: 305 PRGGSWPGGCPCGRSRSRAPSPP 237
PRGG+ PG P R S +PSPP
Sbjct: 202 PRGGTQPGCAPPSRRASPSPSPP 134
Score = 21.7 bits (41), Expect(2) = 0.77
Identities = 11/33 (33%), Positives = 14/33 (42%)
Frame = -1 / -1
Query: 1084 GEPLVDAELKHLSGLVDAADEAPRDGLPPQHHH 986
G ++ EL L LVD + P P HH
Sbjct: 456 GYKYLNLELLELVVLVDGLGDVPGAAHPLGEHH 358
>gb|BM374007.2|BM374007 EBma03_SQ003_F22_R maternal, 8 DPA, no treatment, cv Optic, EBma03
Hordeum vulgare subsp. vulgare cDNA clone
EBma03_SQ003_F22 5', mRNA sequence
Length = 546
Score = 34.1 bits (68), Expect(2) = 0.78
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = -3 / -1
Query: 305 PRGGSWPGGCPCGRSRSRAPSPP 237
PRGG+ PG P R S +PSPP
Sbjct: 150 PRGGTQPGCAPPSRRASPSPSPP 82
Score = 21.7 bits (41), Expect(2) = 0.78
Identities = 11/33 (33%), Positives = 14/33 (42%)
Frame = -1 / -2
Query: 1084 GEPLVDAELKHLSGLVDAADEAPRDGLPPQHHH 986
G ++ EL L LVD + P P HH
Sbjct: 404 GYKYLNLELLELVVLVDGLGDVPGAAHPLGEHH 306
>gb|BI957384.1|BI957384 HVSMEn0009E09f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0009E09f, mRNA sequence
Length = 675
Score = 35.4 bits (71), Expect = 0.81
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = +2 / -2
Query: 53 PCAGSSPSPATRSVVVVPAAPIPNRMGSLASERKVVG 163
PC SP P R+ + P AP+P R G + G
Sbjct: 605 PCVAHSPPPTPRAFLSAPLAPLPARPGPAVGSPRTCG 495
>gb|BJ460274.1|BJ460274 BJ460274 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak40c14 3', mRNA sequence
Length = 584
Score = 34.1 bits (68), Expect(2) = 0.84
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = -3 / +3
Query: 305 PRGGSWPGGCPCGRSRSRAPSPP 237
PRGG+ PG P R S +PSPP
Sbjct: 408 PRGGTQPGCAPPSRRASPSPSPP 476
Score = 21.7 bits (41), Expect(2) = 0.84
Identities = 11/33 (33%), Positives = 14/33 (42%)
Frame = -1 / +1
Query: 1084 GEPLVDAELKHLSGLVDAADEAPRDGLPPQHHH 986
G ++ EL L LVD + P P HH
Sbjct: 154 GYKYLNLELLELVVLVDGLGDVPGAAHPLGEHH 252
>gb|BJ452726.1|BJ452726 BJ452726 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak40c14 5', mRNA sequence
Length = 594
Score = 34.1 bits (68), Expect(2) = 0.85
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = -3 / -1
Query: 305 PRGGSWPGGCPCGRSRSRAPSPP 237
PRGG+ PG P R S +PSPP
Sbjct: 177 PRGGTQPGCAPPSRRASPSPSPP 109
Score = 21.7 bits (41), Expect(2) = 0.85
Identities = 11/33 (33%), Positives = 14/33 (42%)
Frame = -1 / -2
Query: 1084 GEPLVDAELKHLSGLVDAADEAPRDGLPPQHHH 986
G ++ EL L LVD + P P HH
Sbjct: 431 GYKYLNLELLELVVLVDGLGDVPGAAHPLGEHH 333
>gb|AL510378.1|AL510378 AL510378 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY04L23u 3',
mRNA sequence
Length = 616
Score = 34.1 bits (68), Expect(2) = 0.88
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = -3 / +1
Query: 305 PRGGSWPGGCPCGRSRSRAPSPP 237
PRGG+ PG P R S +PSPP
Sbjct: 349 PRGGTQPGCAPPSRRASPSPSPP 417
Score = 21.7 bits (41), Expect(2) = 0.88
Identities = 11/33 (33%), Positives = 14/33 (42%)
Frame = -1 / +2
Query: 1084 GEPLVDAELKHLSGLVDAADEAPRDGLPPQHHH 986
G ++ EL L LVD + P P HH
Sbjct: 95 GYKYLNLELLELVVLVDGLGDVPGAAHPLGEHH 193
>gb|BU989350.1|BU989350 HF21I01r HF Hordeum vulgare subsp. vulgare cDNA clone HF21I01
5-PRIME, mRNA sequence
Length = 465
Score = 25.4 bits (49), Expect(3) = 0.92
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -3 / -2
Query: 461 AQRWPCRGCTR 429
++RW CRGC R
Sbjct: 95 SRRWRCRGCRR 63
Score = 24.4 bits (47), Expect(3) = 0.92
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = -3 / -2
Query: 1349 GKKAERQQLVKEAERCTQTRPERTLHAAHRRGSTRRR 1239
G + R+ A RC+++R R RG +RRR
Sbjct: 413 GAGSSRRWTAAAAGRCSRSRSRRWGSRGSCRGRSRRR 303
Score = 22.6 bits (43), Expect(3) = 0.92
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = -3 / -2
Query: 284 GGCPCGRSRSRAPSPP 237
G CP G R RAP P
Sbjct: 50 G*CPGGSRRPRAPRRP 3
>gb|AL503701.1|AL503701 AL503701 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW03C06T 5', mRNA sequence
Length = 700
Score = 35.0 bits (70), Expect = 1.1
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +2 / +2
Query: 233 DVVVKVLYCGICHTDIHQAKNHL 301
+V+VK CG+CH+D+H K L
Sbjct: 272 EVLVKTKACGVCHSDLHVMKGEL 340
>gb|AL504129.1|AL504129 AL504129 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW04E17V 5', mRNA sequence
Length = 544
Score = 35.0 bits (70), Expect = 1.1
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +2 / +1
Query: 233 DVVVKVLYCGICHTDIHQAKNHL 301
+V+VK CG+CH+D+H K L
Sbjct: 88 EVLVKTKACGVCHSDLHVMKGEL 156
>gb|AL504484.1|AL504484 AL504484 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW05G22V 5', mRNA sequence
Length = 700
Score = 35.0 bits (70), Expect = 1.1
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +2 / +3
Query: 233 DVVVKVLYCGICHTDIHQAKNHL 301
+V+VK CG+CH+D+H K L
Sbjct: 264 EVLVKTKACGVCHSDLHVMKGEL 332
>gb|AL505626.1|AL505626 AL505626 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW09A15V 5', mRNA sequence
Length = 464
Score = 35.0 bits (70), Expect = 1.1
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +2 / +2
Query: 233 DVVVKVLYCGICHTDIHQAKNHL 301
+V+VK CG+CH+D+H K L
Sbjct: 107 EVLVKTKACGVCHSDLHVMKGEL 175
>gb|BF260127.1|BF260127 HVSMEf0021C22f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0021C22f, mRNA sequence
Length = 804
Score = 35.0 bits (70), Expect = 1.1
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +2 / +2
Query: 233 DVVVKVLYCGICHTDIHQAKNHL 301
+V+VK CG+CH+D+H K L
Sbjct: 248 EVLVKTKACGVCHSDLHVMKGEL 316
>gb|BF628396.2|BF628396 HVSMEb0003O18f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0003O18f, mRNA sequence
Length = 507
Score = 35.0 bits (70), Expect = 1.1
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +2 / +1
Query: 233 DVVVKVLYCGICHTDIHQAKNHL 301
+V+VK CG+CH+D+H K L
Sbjct: 289 EVLVKTKACGVCHSDLHVMKGEL 357
>gb|BG300842.1|BG300842 HVSMEb0018K03f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0018K03f, mRNA sequence
Length = 614
Score = 35.0 bits (70), Expect = 1.1
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +2 / +3
Query: 233 DVVVKVLYCGICHTDIHQAKNHL 301
+V+VK CG+CH+D+H K L
Sbjct: 117 EVLVKTKACGVCHSDLHVMKGEL 185
>gb|BE454456.2|BE454456 HVSMEh0094H24f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0094H24f, mRNA sequence
Length = 690
Score = 35.0 bits (70), Expect = 1.1
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +2 / +3
Query: 233 DVVVKVLYCGICHTDIHQAKNHL 301
+V+VK CG+CH+D+H K L
Sbjct: 291 EVLVKTKACGVCHSDLHVMKGEL 359
>gb|BI951486.1|BI951486 HVSMEm0001B13f Hordeum vulgare green seedling EST library
HVcDNA0014 (Blumeria infected) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEm0001B13f, mRNA sequence
Length = 840
Score = 35.0 bits (70), Expect = 1.1
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +2 / +2
Query: 233 DVVVKVLYCGICHTDIHQAKNHL 301
+V+VK CG+CH+D+H K L
Sbjct: 275 EVLVKTKACGVCHSDLHVMKGEL 343
>gb|BF064621.1|BF064621 HV_CEb0016E23f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0016E23f, mRNA sequence
Length = 590
Score = 35.0 bits (70), Expect = 1.1
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +2 / +3
Query: 233 DVVVKVLYCGICHTDIHQAKNHL 301
+V+VK CG+CH+D+H K L
Sbjct: 285 EVLVKTKACGVCHSDLHVMKGEL 353
>gb|BG414413.2|BG414413 HVSMEk0002G22f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0002G22f, mRNA sequence
Length = 904
Score = 35.0 bits (70), Expect = 1.1
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +2 / +3
Query: 233 DVVVKVLYCGICHTDIHQAKNHL 301
+V+VK CG+CH+D+H K L
Sbjct: 486 EVLVKTKACGVCHSDLHVMKGEL 554
>gb|BQ460758.1|BQ460758 HA06A05r HA Hordeum vulgare subsp. vulgare cDNA clone HA06A05
5-PRIME, mRNA sequence
Length = 632
Score = 35.0 bits (70), Expect = 1.1
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +2 / +2
Query: 233 DVVVKVLYCGICHTDIHQAKNHL 301
+V+VK CG+CH+D+H K L
Sbjct: 35 EVLVKTKACGVCHSDLHVMKGEL 103
>gb|BQ462673.1|BQ462673 HI01K15T HI Hordeum vulgare subsp. vulgare cDNA clone HI01K15
5-PRIME, mRNA sequence
Length = 533
Score = 35.0 bits (70), Expect = 1.1
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +2 / +1
Query: 233 DVVVKVLYCGICHTDIHQAKNHL 301
+V+VK CG+CH+D+H K L
Sbjct: 220 EVLVKTKACGVCHSDLHVMKGEL 288
>gb|BQ462846.1|BQ462846 HI02D03r HI Hordeum vulgare subsp. vulgare cDNA clone HI02D03
5-PRIME, mRNA sequence
Length = 577
Score = 35.0 bits (70), Expect = 1.1
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +2 / +1
Query: 233 DVVVKVLYCGICHTDIHQAKNHL 301
+V+VK CG+CH+D+H K L
Sbjct: 220 EVLVKTKACGVCHSDLHVMKGEL 288
>gb|BM100019.2|BM100019 EBes01_SQ004_O20_R embryo sac, 4-6 DPA, no treatment, cv Optic,
EBes01 Hordeum vulgare subsp. vulgare cDNA clone
EBes01_SQ004_O20 5', mRNA sequence
Length = 349
Score = 35.0 bits (70), Expect = 1.1
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +2 / +2
Query: 233 DVVVKVLYCGICHTDIHQAKNHL 301
+V+VK CG+CH+D+H K L
Sbjct: 254 EVLVKTKACGVCHSDLHVMKGEL 322
>gb|BU966965.1|BU966965 HB02O14r BC Hordeum vulgare subsp. vulgare cDNA clone HB02O14
5-PRIME, mRNA sequence
Length = 410
Score = 35.0 bits (70), Expect = 1.1
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +2 / +3
Query: 233 DVVVKVLYCGICHTDIHQAKNHL 301
+V+VK CG+CH+D+H K L
Sbjct: 45 EVLVKTKACGVCHSDLHVMKGEL 113
>gb|BU967999.1|BU967999 HB06A23r BC Hordeum vulgare subsp. vulgare cDNA clone HB06A23
5-PRIME, mRNA sequence
Length = 343
Score = 35.0 bits (70), Expect = 1.1
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +2 / +3
Query: 233 DVVVKVLYCGICHTDIHQAKNHL 301
+V+VK CG+CH+D+H K L
Sbjct: 45 EVLVKTKACGVCHSDLHVMKGEL 113
>gb|BU982407.1|BU982407 HA26H07r HA Hordeum vulgare subsp. vulgare cDNA clone HA26H07
5-PRIME, mRNA sequence
Length = 378
Score = 35.0 bits (70), Expect = 1.1
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +2 / +1
Query: 233 DVVVKVLYCGICHTDIHQAKNHL 301
+V+VK CG+CH+D+H K L
Sbjct: 268 EVLVKTKACGVCHSDLHVMKGEL 336
>gb|BU986617.1|BU986617 HF12G16r HF Hordeum vulgare subsp. vulgare cDNA clone HF12G16
5-PRIME, mRNA sequence
Length = 599
Score = 35.0 bits (70), Expect = 1.1
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +2 / +2
Query: 233 DVVVKVLYCGICHTDIHQAKNHL 301
+V+VK CG+CH+D+H K L
Sbjct: 2 EVLVKTKACGVCHSDLHVMKGEL 70
>gb|CA013436.1|CA013436 HT08H05r HT Hordeum vulgare subsp. vulgare cDNA clone HT08H05
5-PRIME, mRNA sequence
Length = 627
Score = 35.0 bits (70), Expect = 1.1
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +2 / +1
Query: 233 DVVVKVLYCGICHTDIHQAKNHL 301
+V+VK CG+CH+D+H K L
Sbjct: 262 EVLVKTKACGVCHSDLHVMKGEL 330
>gb|CA026089.1|CA026089 HZ54F05r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ54F05
5-PRIME, mRNA sequence
Length = 488
Score = 35.0 bits (70), Expect = 1.1
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +2 / +1
Query: 233 DVVVKVLYCGICHTDIHQAKNHL 301
+V+VK CG+CH+D+H K L
Sbjct: 292 EVLVKTKACGVCHSDLHVMKGEL 360
>gb|BI951110.1|BI951110 HVSMEl0024I08f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0024I08f, mRNA sequence
Length = 839
Score = 29.0 bits (57), Expect(2) = 1.2
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +1 / -3
Query: 232 RCGGEGALLRDLPHGHPPGQEPPRGF 309
R G+G HG+PP Q+ RGF
Sbjct: 654 RVSGDGTKPHQYVHGYPPRQDGLRGF 577
Score = 26.7 bits (52), Expect(2) = 1.2
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +2 / -2
Query: 1016 GSFIGSIDETAEVLQFCVDKGLTSQIEVVKM 1108
GS + +DE A V F D+GL + +E +++
Sbjct: 250 GSLLSGVDELAGVHAFVGDEGLGNLLESLRV 158
>gb|BG344626.1|BG344626 HVSMEg0009N16f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0009N16f, mRNA sequence
Length = 776
Score = 28.1 bits (55), Expect(2) = 1.3
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = +1 / +2
Query: 217 EHRP*RCGGEGALLRDLPHGHPPGQEPP 300
EHRP G G LR +P G PP
Sbjct: 227 EHRPGEEGVRGGALRQVPQDAAVGDPPP 310
Score = 24.0 bits (46), Expect(2) = 1.3
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +2 / +1
Query: 50 PPCAGSSPSPATRSVVVVP 106
P C ++PSPAT S P
Sbjct: 67 PGCWRAAPSPATSSATPTP 123
>gb|BM368585.2|BM368585 EBem08_SQ004_A13_R embryo, 40 DPA, no treatment, cv Optic, EBem08
Hordeum vulgare subsp. vulgare cDNA clone
EBem08_SQ004_A13 5', mRNA sequence
Length = 483
Score = 28.1 bits (55), Expect(2) = 1.3
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = +1 / +3
Query: 217 EHRP*RCGGEGALLRDLPHGHPPGQEPP 300
EHRP G G LR +P G PP
Sbjct: 216 EHRPGEEGVRGGALRQVPQDAAVGDPPP 299
Score = 24.0 bits (46), Expect(2) = 1.3
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +2 / +3
Query: 50 PPCAGSSPSPATRSVVVVP 106
P C ++PSPAT S P
Sbjct: 57 PGCWRAAPSPATSSATPTP 113
>gb|CA027205.1|CA027205 HZ58D05r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ58D05
5-PRIME, mRNA sequence
Length = 410
Score = 29.9 bits (59), Expect(2) = 1.4
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3 / -2
Query: 296 GSWPGGCPCGRSRSRAP 246
GSWPGG PC R P
Sbjct: 58 GSWPGGAPCACPRRTWP 8
Score = 24.4 bits (47), Expect(2) = 1.4
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = -3 / -2
Query: 770 WTTS*SPSRGGPWPWL 723
W S P RGGP WL
Sbjct: 400 WLRSWPPWRGGPSAWL 353
>gb|BU990662.1|BU990662 HF25L07r HF Hordeum vulgare subsp. vulgare cDNA clone HF25L07
5-PRIME, mRNA sequence
Length = 597
Score = 25.4 bits (49), Expect(3) = 1.5
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -3 / -2
Query: 461 AQRWPCRGCTR 429
++RW CRGC R
Sbjct: 95 SRRWRCRGCRR 63
Score = 24.4 bits (47), Expect(3) = 1.5
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = -3 / -2
Query: 1349 GKKAERQQLVKEAERCTQTRPERTLHAAHRRGSTRRR 1239
G + R+ A RC+++R R RG +RRR
Sbjct: 413 GAGSSRRWTAAAAGRCSRSRSRRWGSRGSCRGRSRRR 303
Score = 22.6 bits (43), Expect(3) = 1.5
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = -3 / -2
Query: 284 GGCPCGRSRSRAPSPP 237
G CP G R RAP P
Sbjct: 50 G*CPGGSRRPRAPRRP 3
>gb|BI952112.1|BI952112 HVSMEm0004K11f Hordeum vulgare green seedling EST library
HVcDNA0014 (Blumeria infected) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEm0004K11f, mRNA sequence
Length = 1154
Score = 33.1 bits (66), Expect = 4.0
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = -3 / +2
Query: 308 KPRGGSWPGGCPCGRSRSRA 249
K RGG W GG P G R RA
Sbjct: 515 KKRGGRWAGGAPVGGGRKRA 574
Score = 26.3 bits (51), Expect(3) = 1.5
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +1 / -3
Query: 250 ALLRDLPHGHPPGQEPPRGF 309
AL R P G PP PPR F
Sbjct: 573 ALFRPPPTGAPPAHLPPRFF 514
Score = 24.9 bits (48), Expect(3) = 1.5
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +3 / -3
Query: 330 GTRWSARWWRSG 365
G+R RWWRSG
Sbjct: 75 GSRGWRRWWRSG 40
Score = 23.1 bits (44), Expect(3) = 1.5
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +2 / -1
Query: 32 RRRLATPPCAGSSPSPATRSVVVVPAA 112
RR + PP + S P T + +++PAA
Sbjct: 737 RRPVLPPPPSFSLPHARTPAALLLPAA 657
>gb|CA024507.1|CA024507 HZ49H24r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ49H24
5-PRIME, mRNA sequence
Length = 633
Score = 25.4 bits (49), Expect(3) = 1.6
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -3 / -1
Query: 461 AQRWPCRGCTR 429
++RW CRGC R
Sbjct: 180 SRRWRCRGCRR 148
Score = 24.4 bits (47), Expect(3) = 1.6
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = -3 / -1
Query: 1349 GKKAERQQLVKEAERCTQTRPERTLHAAHRRGSTRRR 1239
G + R+ A RC+++R R RG +RRR
Sbjct: 498 GAGSSRRWTAAAAGRCSRSRSRRWGSRGSCRGRSRRR 388
Score = 22.6 bits (43), Expect(3) = 1.6
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = -3 / -1
Query: 284 GGCPCGRSRSRAPSPP 237
G CP G R RAP P
Sbjct: 135 G*CPGGSRRPRAPRRP 88
>gb|BU998066.1|BU998066 HI09O06r HI Hordeum vulgare subsp. vulgare cDNA clone HI09O06
5-PRIME, mRNA sequence
Length = 643
Score = 25.4 bits (49), Expect(3) = 1.7
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -3 / -1
Query: 461 AQRWPCRGCTR 429
++RW CRGC R
Sbjct: 178 SRRWRCRGCRR 146
Score = 24.4 bits (47), Expect(3) = 1.7
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = -3 / -1
Query: 1349 GKKAERQQLVKEAERCTQTRPERTLHAAHRRGSTRRR 1239
G + R+ A RC+++R R RG +RRR
Sbjct: 496 GAGSSRRWTAAAAGRCSRSRSRRWGSRGSCRGRSRRR 386
Score = 22.6 bits (43), Expect(3) = 1.7
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = -3 / -1
Query: 284 GGCPCGRSRSRAPSPP 237
G CP G R RAP P
Sbjct: 133 G*CPGGSRRPRAPRRP 86
>gb|CA024360.1|CA024360 HZ49B12r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ49B12
5-PRIME, mRNA sequence
Length = 571
Score = 27.2 bits (53), Expect(2) = 1.7
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +2 / +1
Query: 47 TPPCAGSSPSPATR 88
TPP GS P+P+TR
Sbjct: 31 TPPSTGSRPAPSTR 72
Score = 24.4 bits (47), Expect(2) = 1.7
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = +2 / +3
Query: 125 RMGSLASERKVVGWAARDATGHLSPYSYTLR 217
R SL+ + G + A+GH PY+Y ++
Sbjct: 120 RFYSLSMLGTLNGKVSTQASGHSGPYTYKIK 212
>gb|CA022617.1|CA022617 HZ43N17r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ43N17
5-PRIME, mRNA sequence
Length = 317
Score = 27.2 bits (53), Expect(2) = 1.8
Identities = 9/19 (47%), Positives = 10/19 (52%)
Frame = -3 / -3
Query: 287 PGGCPCGRSRSRAPSPPHL 231
P PC R R P+PP L
Sbjct: 72 PAAAPCSPCRPRRPAPPSL 16
Score = 24.4 bits (47), Expect(2) = 1.8
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -3 / -1
Query: 332 AQGP*DTLKPRGGSWPGG 279
A+GP DTL GG+ GG
Sbjct: 248 AEGPGDTLDADGGALGGG 195
>gb|BU997367.1|BU997367 HI07M11r HI Hordeum vulgare subsp. vulgare cDNA clone HI07M11
5-PRIME, mRNA sequence
Length = 301
Score = 26.3 bits (51), Expect(2) = 1.8
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -2 / -3
Query: 168 AHPTTFLSDARLPIRFGIGAAGTTTTER 85
A PTT S AR ++ G+G GT +T +
Sbjct: 89 ASPTTTTSIARRAMQHGLGWDGTWSTSK 6
Score = 25.4 bits (49), Expect(2) = 1.8
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -3 / -1
Query: 296 GSWPGGCPCGRSRSRA 249
G PG CP R+R+RA
Sbjct: 184 GRSPGSCPPSRTRTRA 137
>gb|AL504810.1|AL504810 AL504810 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW06H14V 5', mRNA sequence
Length = 700
Score = 25.4 bits (49), Expect(3) = 2.0
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -3 / -3
Query: 461 AQRWPCRGCTR 429
++RW CRGC R
Sbjct: 161 SRRWRCRGCRR 129
Score = 24.4 bits (47), Expect(3) = 2.0
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = -3 / -3
Query: 1349 GKKAERQQLVKEAERCTQTRPERTLHAAHRRGSTRRR 1239
G + R+ A RC+++R R RG +RRR
Sbjct: 479 GAGSSRRWTAAAAGRCSRSRSRRWGSRGSCRGRSRRR 369
Score = 22.6 bits (43), Expect(3) = 2.0
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = -3 / -3
Query: 284 GGCPCGRSRSRAPSPP 237
G CP G R RAP P
Sbjct: 116 G*CPGGSRRPRAPRRP 69
>gb|CA009629.1|CA009629 HU14K15r HU Hordeum vulgare subsp. vulgare cDNA clone HU14K15
5-PRIME, mRNA sequence
Length = 595
Score = 28.6 bits (56), Expect(2) = 2.1
Identities = 8/17 (47%), Positives = 14/17 (82%)
Frame = +2 / +3
Query: 233 DVVVKVLYCGICHTDIH 283
+V VK+L+ +CHTD++
Sbjct: 27 EVRVKILFTSLCHTDVY 77
Score = 25.8 bits (50), Expect(2) = 2.1
Identities = 6/16 (37%), Positives = 9/16 (56%)
Frame = +2 / +2
Query: 422 CCRECSPCKANVEQYC 469
CCR C C+ + +C
Sbjct: 548 CCRRCKDCRCIKDHWC 595
>gb|AL510716.1|AL510716 AL510716 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY05M16u 3',
mRNA sequence
Length = 510
Score = 34.1 bits (68), Expect = 2.1
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = -2 / +3
Query: 141 ARLPIRFGIGAAGTTTTERVAGDGDEPAQGGVAS 40
AR PI +AG T A DGD PA+G V +
Sbjct: 195 ARRPINASTRSAGADTPAAAAADGDLPAEGAVVA 296
>gb|BF619946.2|BF619946 HVSMEc0009M14f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0009M14f, mRNA sequence
Length = 593
Score = 34.1 bits (68), Expect = 2.1
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -3 / -3
Query: 299 GGSWPGGCPCGRSRSR 252
G +WPGGCP G++R R
Sbjct: 243 GSAWPGGCPAGKTR*R 196
>gb|BF616805.2|BF616805 HVSMEc0012M22f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0012M22f, mRNA sequence
Length = 747
Score = 34.1 bits (68), Expect = 2.1
Identities = 18/46 (39%), Positives = 25/46 (54%)
Frame = +2 / +1
Query: 2 RRSRGFLSQLRRRLATPPCAGSSPSPATRSVVVVPAAPIPNRMGSL 139
+++ G +QL RR A PP AG P PA R+ P A + G+L
Sbjct: 34 QQADGIHAQLLRRPAEPPVAGPPPEPAHRAHPGQPRAGAVHVAGAL 171
>gb|BG417530.1|BG417530 HVSMEk0017P05f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0017P05f, mRNA sequence
Length = 815
Score = 34.1 bits (68), Expect = 2.1
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -3 / -1
Query: 299 GGSWPGGCPCGRSRSR 252
G +WPGGCP G++R R
Sbjct: 239 GSAWPGGCPAGKTR*R 192
>gb|BF266193.2|BF266193 HV_CEa0014H01f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0014H01f, mRNA sequence
Length = 507
Score = 34.1 bits (68), Expect = 2.1
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = -3 / -1
Query: 305 PRGGSWPGGCPCGRSRSRAPSPP 237
PRGG+ PG P R S +PSPP
Sbjct: 168 PRGGTQPGCAPPSRRASPSPSPP 100
>gb|AJ434939.1|AJ434939 AJ434939 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200055G07F1, mRNA sequence
Length = 307
Score = 34.1 bits (68), Expect = 2.1
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = -3 / -1
Query: 305 PRGGSWPGGCPCGRSRSRAPSPP 237
PRGG+ PG P R S +PSPP
Sbjct: 106 PRGGTQPGCAPPSRRASPSPSPP 38
>gb|CA017883.1|CA017883 HV06K08r HV Hordeum vulgare subsp. vulgare cDNA clone HV06K08
5-PRIME, mRNA sequence
Length = 500
Score = 34.1 bits (68), Expect = 2.1
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -3 / -1
Query: 299 GGSWPGGCPCGRSRSR 252
G +WPGGCP G++R R
Sbjct: 68 GSAWPGGCPAGKTR*R 21
>gb|CA021385.1|CA021385 HZ39P03r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ39P03
5-PRIME, mRNA sequence
Length = 590
Score = 34.1 bits (68), Expect = 2.1
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -3 / -1
Query: 299 GGSWPGGCPCGRSRSR 252
G +WPGGCP G++R R
Sbjct: 236 GSAWPGGCPAGKTR*R 189
>gb|CA021446.1|CA021446 HZ40C04r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ40C04
5-PRIME, mRNA sequence
Length = 632
Score = 34.1 bits (68), Expect = 2.1
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -3 / -3
Query: 299 GGSWPGGCPCGRSRSR 252
G +WPGGCP G++R R
Sbjct: 243 GSAWPGGCPAGKTR*R 196
>gb|CA023897.1|CA023897 HZ47L22r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ47L22
5-PRIME, mRNA sequence
Length = 284
Score = 34.1 bits (68), Expect = 2.1
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = -3 / -1
Query: 305 PRGGSWPGGCPCGRSRSRAPSPP 237
PRGG+ PG P R S +PSPP
Sbjct: 251 PRGGTQPGCAPPSRRASPSPSPP 183
>gb|CA024161.1|CA024161 HZ48I14r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ48I14
5-PRIME, mRNA sequence
Length = 607
Score = 34.1 bits (68), Expect = 2.1
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = +2 / -3
Query: 38 RLATPPCAGSSPSPATRSVVVVPAAPIPNRMGSLASERKVVGWAA 172
R PP + SSP+P V V A+P P SL V WA+
Sbjct: 140 RSTRPPPSPSSPAPGGSPTVPVAASPSPTPSRSLTDALGVGNWAS 6
>gb|CA031716.1|CA031716 HX10O19r HX Hordeum vulgare subsp. vulgare cDNA clone HX10O19
5-PRIME, mRNA sequence
Length = 521
Score = 34.1 bits (68), Expect = 2.1
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -3 / -3
Query: 299 GGSWPGGCPCGRSRSR 252
G +WPGGCP G++R R
Sbjct: 237 GSAWPGGCPAGKTR*R 190
>gb|BI958434.1|BI958434 HVSMEn0014P10f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0014P10f,
mRNA sequence
Length = 645
Score = 29.5 bits (58), Expect(2) = 2.2
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = -1 / -2
Query: 1006 LPPQHHHGRHEAQGL 962
L P+ HHGRH A+GL
Sbjct: 449 LLPERHHGRHVARGL 405
Score = 24.9 bits (48), Expect(2) = 2.2
Identities = 8/18 (44%), Positives = 14/18 (77%)
Frame = -2 / -1
Query: 90 ERVAGDGDEPAQGGVASL 37
ER+ G+G++ +GG A+L
Sbjct: 129 ERLLGEGEKKQEGGAAAL 76
>gb|BI960584.1|BI960584 HVSMEn0025D02f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0025D02f, mRNA sequence
Length = 805
Score = 27.2 bits (53), Expect(2) = 2.3
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -3 / -2
Query: 305 PRGGSWPGG 279
PRGG WPGG
Sbjct: 696 PRGGPWPGG 670
Score = 24.0 bits (46), Expect(2) = 2.3
Identities = 8/22 (36%), Positives = 11/22 (50%)
Frame = -3 / -1
Query: 296 GSWPGGCPCGRSRSRAPSPPHL 231
G PGG P ++ P PP +
Sbjct: 553 GRGPGGGPAAKAPKLVPPPPEV 488
>gb|BM816860.1|BM816860 HB105D05_SK.ab1 HB Hordeum vulgare subsp. vulgare cDNA clone
HB105D05_SK.ab1 similar to (AC006550) Belongs to the
PF|01027 Uncharacterized protein family UPF0005 with 7
transmembrane domains. [Arabidopsis thaliana], mRNA
sequence
Length = 888
Score = 33.6 bits (67), Expect = 2.9
Identities = 18/49 (36%), Positives = 22/49 (44%)
Frame = +2 / -3
Query: 38 RLATPPCAGSSPSPATRSVVVVPAAPIPNRMGSLASERKVVGWAARDAT 184
R PP + SSP+P V V A+P P SL V W R A+
Sbjct: 169 RSTRPPPSPSSPAPGGSPTVPVAASPSPTPSRSLTDALGVGNWGFRLAS 23
>gb|BJ448569.1|BJ448569 BJ448569 K. Sato unpublished cDNA library, cv. Akashinriki vegetative
stage leaves Hordeum vulgare subsp. vulgare cDNA clone
baak20g24 5', mRNA sequence
Length = 670
Score = 33.6 bits (67), Expect = 2.9
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = -3 / +1
Query: 1370 SQSPEQNGKKAERQQLVKEAERCTQTRPERTLHAAHRRGSTRRRGAI 1230
S PE+ + + Q+ ++E + + R ER H HRR +R+G +
Sbjct: 133 SFQPERTSRSSG*QESIREGPQVHRRR*ERRRHPTHRREGLQRQGLL 273
>gb|BJ456291.1|BJ456291 BJ456291 K. Sato unpublished cDNA library, cv. Akashinriki vegetative
stage leaves Hordeum vulgare subsp. vulgare cDNA clone
baak20g24 3', mRNA sequence
Length = 706
Score = 33.6 bits (67), Expect = 2.9
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = -3 / -2
Query: 1370 SQSPEQNGKKAERQQLVKEAERCTQTRPERTLHAAHRRGSTRRRGAI 1230
S PE+ + + Q+ ++E + + R ER H HRR +R+G +
Sbjct: 573 SFQPERTSRSSG*QESIREGPQVHRRR*ERRRHPTHRREGLQRQGLL 433
>gb|BU984313.1|BU984313 HF03J09r HF Hordeum vulgare subsp. vulgare cDNA clone HF03J09
5-PRIME, mRNA sequence
Length = 526
Score = 33.6 bits (67), Expect = 2.9
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = -3 / +2
Query: 1370 SQSPEQNGKKAERQQLVKEAERCTQTRPERTLHAAHRRGSTRRRGAI 1230
S PE+ + + Q+ ++E + + R ER H HRR +R+G +
Sbjct: 62 SFQPERTSRSSG*QESIREGPQVHRRR*ERRRHPTHRREGLQRQGLL 202
>gb|BU997672.1|BU997672 HI08K20r HI Hordeum vulgare subsp. vulgare cDNA clone HI08K20
5-PRIME, mRNA sequence
Length = 378
Score = 33.6 bits (67), Expect = 2.9
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = -2 / -2
Query: 138 RLPIRFGIGAAGTTTTERVAGDGDEPAQGG 49
R P RF G + T R+ G+G+EPA+ G
Sbjct: 320 RRPCRFAGGLSRRVTARRIEGEGNEPARWG 231
>gb|CA000617.1|CA000617 HS07N10u HS Hordeum vulgare subsp. vulgare cDNA clone HS07N10
3-PRIME, mRNA sequence
Length = 574
Score = 33.6 bits (67), Expect = 2.9
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = -3 / -3
Query: 1370 SQSPEQNGKKAERQQLVKEAERCTQTRPERTLHAAHRRGSTRRRGAI 1230
S PE+ + + Q+ ++E + + R ER H HRR +R+G +
Sbjct: 572 SFQPERTSRSSG*QESIREGPQVHRRR*ERRRHPTHRREGLQRQGLL 432
>gb|AL505176.1|AL505176 AL505176 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW07K03V 5', mRNA sequence
Length = 492
Score = 29.0 bits (57), Expect(2) = 3.1
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -3 / -1
Query: 296 GSWPGGCPCGRSR 258
GSWPGG PC R
Sbjct: 138 GSWPGGAPCACPR 100
Score = 24.4 bits (47), Expect(2) = 3.1
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = -3 / -1
Query: 770 WTTS*SPSRGGPWPWL 723
W S P RGGP WL
Sbjct: 480 WLRSWPPWRGGPSAWL 433
>gb|CV058594.1|CV058594 BNEL39g1 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL39g1 5' similar to Alcohol
dehydrogenase 3, mRNA sequence
Length = 499
Score = 30.9 bits (61), Expect(2) = 3.2
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = +2 / +3
Query: 233 DVVVKVLYCGICHTDIH 283
+V VK+LY +CHTD++
Sbjct: 189 EVQVKILYTALCHTDVY 239
Score = 22.6 bits (43), Expect(2) = 3.2
Identities = 5/16 (31%), Positives = 10/16 (62%)
Frame = +2 / +3
Query: 425 CRECSPCKANVEQYCN 472
C++C+ CK+ C+
Sbjct: 378 CKDCAHCKSEESNLCD 425
>gb|BU980297.1|BU980297 HA20E06r HA Hordeum vulgare subsp. vulgare cDNA clone HA20E06
5-PRIME, mRNA sequence
Length = 500
Score = 29.0 bits (57), Expect(2) = 3.2
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -3 / -1
Query: 296 GSWPGGCPCGRSR 258
GSWPGG PC R
Sbjct: 65 GSWPGGAPCACPR 27
Score = 24.4 bits (47), Expect(2) = 3.2
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = -3 / -1
Query: 770 WTTS*SPSRGGPWPWL 723
W S P RGGP WL
Sbjct: 407 WLRSWPPWRGGPSAWL 360
>gb|CA020389.1|CA020389 HZ36C11r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ36C11
5-PRIME, mRNA sequence
Length = 574
Score = 29.0 bits (57), Expect(2) = 3.6
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -3 / -3
Query: 296 GSWPGGCPCGRSR 258
GSWPGG PC R
Sbjct: 47 GSWPGGAPCACPR 9
Score = 24.4 bits (47), Expect(2) = 3.6
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = -3 / -3
Query: 770 WTTS*SPSRGGPWPWL 723
W S P RGGP WL
Sbjct: 389 WLRSWPPWRGGPSAWL 342
>gb|CA030414.1|CA030414 HX06P20r HX Hordeum vulgare subsp. vulgare cDNA clone HX06P20
5-PRIME, mRNA sequence
Length = 582
Score = 29.0 bits (57), Expect(2) = 3.7
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -3 / -1
Query: 296 GSWPGGCPCGRSR 258
GSWPGG PC R
Sbjct: 153 GSWPGGAPCACPR 115
Score = 24.4 bits (47), Expect(2) = 3.7
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = -3 / -1
Query: 770 WTTS*SPSRGGPWPWL 723
W S P RGGP WL
Sbjct: 495 WLRSWPPWRGGPSAWL 448
>gb|BF258657.2|BF258657 HVSMEf0016F09f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0016F09f, mRNA sequence
Length = 892
Score = 33.1 bits (66), Expect = 4.0
Identities = 20/62 (32%), Positives = 23/62 (37%)
Frame = +2 / -3
Query: 2 RRSRGFLSQLRRRLATPPCAGSSPSPATRSVVVVPAAPIPNRMGSLASERKVVGWAARDA 181
R G S R PP + SPA RS+ P P A R+ W AR
Sbjct: 452 RPGSGGTSCWSARRRAPPSSRPPSSPAARSLACPCGCPAPRCARRTAPARRRAPWRAR*G 273
Query: 182 TG 187
TG
Sbjct: 272 TG 267
>gb|BG366293.1|BG366293 HVSMEi0006J16f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0006J16f, mRNA sequence
Length = 711
Score = 33.1 bits (66), Expect = 4.0
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = -3 / -2
Query: 299 GGSWPGGCPCGRSRSRAPSPP 237
GG GC C R R+RAP PP
Sbjct: 119 GGCR*AGCRCSRGRARAPPPP 57
Database: Hordeum_nucl_with_EST.fasta
Posted date: May 2, 2006 2:38 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 519,685,236
Number of Sequences: 312970
Number of extensions: 7177891
Number of successful extensions: 100958
Number of sequences better than 10.0: 506
length of database: 58,378,179
effective HSP length: 53
effective length of database: 41,790,769
effective search space used: 18847636819
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)