TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QBTB.064D08F020918.3.1
(559 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BU970342.1|BU970342 HB14F18r BC Hordeum vulgare subsp. v... 121 3e-032
gb|AF189788.1|AF189788 Hordeum vulgare putative c-myb-like ... 130 6e-030
gb|AL507750.1|AL507750 AL507750 Hordeum vulgare Barke devel... 114 3e-025
gb|BQ756020.1|BQ756020 EBem05_SQ001_E11_R embryo, 14 DPA, n... 114 3e-025
gb|CK124462.1|CK124462 BES1824109d16 BES1824 Hordeum vulgar... 109 1e-023
gb|CK124499.1|CK124499 BES1824109g02 BES1824 Hordeum vulgar... 109 1e-023
gb|CV059557.1|CV059557 BNEL49d7 Barley EST endosperm librar... 107 5e-023
gb|CV063142.1|CV063142 BNEL87b1 Barley EST endosperm librar... 107 5e-023
gb|CV063485.1|CV063485 BNEL8H1 Barley EST endosperm library... 107 5e-023
gb|CV057037.1|CV057037 BNEL23d1 Barley EST endosperm librar... 107 7e-023
gb|CV053601.1|CV053601 BNEL101a9 Barley EST endosperm libra... 102 2e-021
gb|BU998160.1|BU998160 HI10C21r HI Hordeum vulgare subsp. v... 98 5e-020
gb|BE519986.1|BE519986 HV_CEb0021P13f Hordeum vulgare seedl... 96 2e-019
gb|AF189787.1|AF189787 Hordeum vulgare putative c-myb-like ... 65 1e-017
gb|BM101125.2|BM101125 EBpi01_SQ002_P05_R pistil, 1 DPA, no... 86 1e-016
gb|BF259477.2|BF259477 HVSMEf0019D12f Hordeum vulgare seedl... 66 3e-016
gb|BF617675.2|BF617675 HVSMEc0018K06f Hordeum vulgare seedl... 64 2e-014
gb|BQ470201.1|BQ470201 HX02B17r HX Hordeum vulgare subsp. v... 64 2e-014
gb|CV062831.1|CV062831 BNEL83e5 Barley EST endosperm librar... 60 2e-014
gb|BU997080.1|BU997080 HI06N15r HI Hordeum vulgare subsp. v... 64 2e-014
gb|CV062377.1|CV062377 BNEL79d11 Barley EST endosperm libra... 60 2e-014
gb|CV056818.1|CV056818 BNEL20h7 Barley EST endosperm librar... 60 2e-014
gb|CV058774.1|CV058774 BNEL40g12 Barley EST endosperm libra... 60 2e-014
gb|CV056415.1|CV056415 BNEL17E10 Barley EST endosperm libra... 60 2e-014
gb|CV058910.1|CV058910 BNEL42d1 Barley EST endosperm librar... 60 2e-014
gb|CV063729.1|CV063729 BNEL92e6 Barley EST endosperm librar... 60 2e-014
gb|BG343686.1|BG343686 HVSMEg0006D17f Hordeum vulgare pre-a... 64 2e-014
gb|BG343689.1|BG343689 HVSMEg0006D21f Hordeum vulgare pre-a... 64 2e-014
emb|X87690.1|HVRNAGAM1 H.vulgare mRNA for GAMyb protein 61 3e-014
gb|CA014662.1|CA014662 HT11P22r HT Hordeum vulgare subsp. v... 61 3e-014
gb|CA013607.1|CA013607 HT08P20r HT Hordeum vulgare subsp. v... 61 3e-014
gb|BQ761004.1|BQ761004 EBro04_SQ001_O04_R root, 3 week, sal... 63 6e-014
emb|X70878.1|HVMYB3 H.vulgare myb3 mRNA 63 8e-014
gb|BI946875.1|BI946875 HVSMEl0002J21f Hordeum vulgare spike... 63 8e-014
gb|BQ472089.1|BQ472089 HV04G01r HV Hordeum vulgare subsp. v... 70 8e-014
gb|BU996472.1|BU996472 HM13L14r HM Hordeum vulgare subsp. v... 63 8e-014
gb|BI959333.1|BI959333 HVSMEn0019E14f Hordeum vulgare rachi... 63 8e-014
gb|BI959020.1|BI959020 HVSMEn0017M09f Hordeum vulgare rachi... 55 2e-013
gb|CV058923.1|CV058923 BNEL42e10 Barley EST endosperm libra... 63 2e-013
gb|BU998112.1|BU998112 HI10A14r HI Hordeum vulgare subsp. v... 64 2e-013
gb|CA019900.1|CA019900 HV13K14r HV Hordeum vulgare subsp. v... 61 2e-013
gb|AL507585.1|AL507585 AL507585 Hordeum vulgare Barke devel... 62 7e-013
gb|CB882601.1|CB882601 HL02F10w HL Hordeum vulgare subsp. v... 61 7e-013
gb|CA002506.1|CA002506 HS07L12r HS Hordeum vulgare subsp. v... 61 7e-013
gb|BQ466900.1|BQ466900 HS01O24T HS Hordeum vulgare subsp. v... 56 7e-013
gb|CB876695.1|CB876695 HP02B11T HP Hordeum vulgare subsp. v... 56 1e-012
gb|BQ467188.1|BQ467188 HS02O24r HS Hordeum vulgare subsp. v... 56 1e-012
gb|BQ463523.1|BQ463523 HI05J08r HI Hordeum vulgare subsp. v... 61 1e-012
gb|CV053597.1|CV053597 BNEL101a5 Barley EST endosperm libra... 56 3e-012
gb|BG343209.2|BG343209 HVSMEg0005B14f Hordeum vulgare pre-a... 55 4e-012
gb|BQ764651.1|BQ764651 EBca01_SQ004_C14_R carpel, pre-anthe... 61 8e-012
gb|BE558747.2|BE558747 HV_CEb0020E02f Hordeum vulgare seedl... 51 1e-011
gb|BF620286.3|BF620286 HVSMEc0019F08f Hordeum vulgare seedl... 53 1e-011
gb|CA027463.1|CA027463 HZ59A03r HZ Hordeum vulgare subsp. v... 59 2e-011
gb|BE559390.2|BE559390 HV_CEb0024H06f Hordeum vulgare seedl... 55 3e-011
gb|BF617565.3|BF617565 HVSMEc0018A12f Hordeum vulgare seedl... 55 3e-011
gb|BQ763917.1|BQ763917 EBro03_SQ005_C21_R root, 3 week, wat... 55 3e-011
gb|CA032540.1|CA032540 HX13G05r HX Hordeum vulgare subsp. v... 55 3e-011
gb|BG300704.1|BG300704 HVSMEb0018B03f Hordeum vulgare seedl... 55 3e-011
gb|BM371065.2|BM371065 EBro04_SQ003_G02_R root, 3 week, sal... 55 3e-011
gb|BM371066.2|BM371066 EBro04_SQ003_G03_R root, 3 week, sal... 55 3e-011
gb|BI960347.1|BI960347 HVSMEn0024E22f Hordeum vulgare rachi... 53 4e-011
gb|CB883071.1|CB883071 HQ01B16w HQ Hordeum vulgare subsp. v... 57 4e-011
gb|BF261857.2|BF261857 HV_CEa0002G15f Hordeum vulgare seedl... 57 5e-011
gb|BG369720.1|BG369720 HVSMEi0025K10f Hordeum vulgare 20 DA... 60 5e-011
gb|CB877704.1|CB877704 HP05O05T HP Hordeum vulgare subsp. v... 60 5e-011
gb|BM370838.2|BM370838 EBro04_SQ002_H14_R root, 3 week, sal... 55 5e-011
emb|X70877.1|HVMYB1 H.vulgare myb1 mRNA 53 7e-011
gb|BF616485.2|BF616485 HVSMEc0010B15f Hordeum vulgare seedl... 67 7e-011
gb|BF259663.3|BF259663 HVSMEf0019O20f Hordeum vulgare seedl... 53 9e-011
gb|BM816803.1|BM816803 HC114B11_SK.ab1 HC Hordeum vulgare s... 51 1e-010
gb|BM443626.2|BM443626 EBro02_SQ005_P07_R root, 3 week, hyd... 51 1e-010
gb|AY672068.1| Hordeum vulgare subsp. vulgare myb transcrip... 51 2e-010
gb|BQ753632.1|BQ753632 EBan01_SQ004_M23_R anther, yellow st... 61 4e-010
gb|BG301022.1|BG301022 HVSMEb0019E16f Hordeum vulgare seedl... 50 1e-009
gb|BG301049.1|BG301049 HVSMEb0019G16f Hordeum vulgare seedl... 50 1e-009
gb|CA007589.1|CA007589 HU08G21r HU Hordeum vulgare subsp. v... 62 2e-009
emb|X70876.1|HVMYB2 H.vulgare myb2 mRNA 53 2e-009
gb|BF627287.2|BF627287 HVSMEb0004H07f Hordeum vulgare seedl... 53 3e-009
gb|AV914947.1|AV914947 AV914947 K. Sato unpublished cDNA li... 51 3e-009
gb|BI957410.1|BI957410 HVSMEn0009G13f Hordeum vulgare rachi... 54 5e-009
gb|BQ460434.1|BQ460434 HA09K10r HA Hordeum vulgare subsp. v... 55 5e-009
gb|BM371860.2|BM371860 EBma08_SQ004_D12_R maternal, 28 DPA,... 55 5e-009
gb|BU975705.1|BU975705 HB32A20r BC Hordeum vulgare subsp. v... 55 5e-009
gb|CK123641.1|CK123641 BES1824104m18 BES1824 Hordeum vulgar... 54 5e-009
gb|BU975173.1|BU975173 HB30F02r BC Hordeum vulgare subsp. v... 55 5e-009
gb|AL507948.1|AL507948 AL507948 Hordeum vulgare Barke devel... 60 7e-009
emb|X70881.1|HVMYB3G H.vulgare myb3 gene 38 7e-009
gb|BF626054.2|BF626054 HVSMEa0015H17f Hordeum vulgare seedl... 54 8e-009
gb|CV059811.1|CV059811 BNEL51c10 Barley EST endosperm libra... 60 1e-008
gb|BI779364.2|BI779364 EBro01_SQ003_M18_R root, 3 week, hyd... 54 1e-008
gb|BI958189.1|BI958189 HVSMEn0013M24f Hordeum vulgare rachi... 45 2e-008
gb|BG369102.2|BG369102 HVSMEi0021L15f Hordeum vulgare 20 DA... 55 2e-008
gb|AY008692.1| Hordeum vulgare transcription factor GAMyb (... 42 2e-008
gb|BF617142.2|BF617142 HVSMEc0014M02f Hordeum vulgare seedl... 49 3e-008
gb|BF617439.1|BF617439 HVSMEc0017F20f Hordeum vulgare seedl... 57 9e-008
gb|CA008589.1|CA008589 HU11H04r HU Hordeum vulgare subsp. v... 56 1e-007
gb|BQ471469.1|BQ471469 HV02I08r HV Hordeum vulgare subsp. v... 43 1e-007
emb|X99973.1|HVMYB4TRF H.vulgare mRNA for myb4 transcriptio... 55 2e-007
gb|CV063055.1|CV063055 BNEL86b3 Barley EST endosperm librar... 44 3e-007
gb|CA019195.1|CA019195 HV11C18r HV Hordeum vulgare subsp. v... 53 1e-006
gb|BF064941.1|BF064941 HV_CEb0022A15f Hordeum vulgare seedl... 36 3e-006
gb|BI954784.1|BI954784 HVSMEm0019M04f Hordeum vulgare green... 51 4e-006
gb|AV932650.1|AV932650 AV932650 K. Sato unpublished cDNA li... 51 4e-006
gb|AV933832.1|AV933832 AV933832 K. Sato unpublished cDNA li... 51 4e-006
gb|BQ765682.1|BQ765682 EBro03_SQ007_I24_R root, 3 week, wat... 51 4e-006
gb|CA003603.1|CA003603 HS14P22r HS Hordeum vulgare subsp. v... 37 5e-006
gb|BG415768.1|BG415768 HVSMEk0007M02f Hordeum vulgare testa... 51 7e-006
emb|X70879.1|HVMYB1G H.vulgare Myb1 gene 33 1e-005
gb|BG343954.1|BG343954 HVSMEg0007D14f Hordeum vulgare pre-a... 36 7e-005
gb|BE455245.2|BE455245 HVSMEh0096L16f Hordeum vulgare 5-45 ... 33 3e-004
gb|BI956816.1|BI956816 HVSMEn0005H11f Hordeum vulgare rachi... 28 3e-004
gb|BG368576.2|BG368576 HVSMEi0019M02f Hordeum vulgare 20 DA... 44 5e-004
gb|BF618630.2|BF618630 HVSMEc0006O07f Hordeum vulgare seedl... 30 6e-004
gb|AV920069.1|AV920069 AV920069 K. Sato unpublished cDNA li... 41 9e-004
gb|BE602473.2|BE602473 HVSMEh0099B10f Hordeum vulgare 5-45 ... 43 0.001
gb|BG369593.2|BG369593 HVSMEi0025C01f Hordeum vulgare 20 DA... 43 0.001
gb|BM099949.2|BM099949 EBes01_SQ004_L19_R embryo sac, 4-6 D... 43 0.001
gb|BQ768242.1|BQ768242 EBro08_SQ011_L02_R root, 3 week, dro... 43 0.001
gb|BU997102.1|BU997102 HI06O17r HI Hordeum vulgare subsp. v... 43 0.001
gb|BU997979.1|BU997979 HI09J14r HI Hordeum vulgare subsp. v... 43 0.001
gb|BU998579.1|BU998579 HI11I02r HI Hordeum vulgare subsp. v... 43 0.001
gb|AJ463005.1|AJ463005 AJ463005 S00002 Hordeum vulgare subs... 42 0.002
gb|BG300766.1|BG300766 HVSMEb0018F03f Hordeum vulgare seedl... 42 0.003
gb|BF065151.1|BF065151 HV_CEb0023I16f Hordeum vulgare seedl... 42 0.003
gb|BG368560.2|BG368560 HVSMEi0019L19f Hordeum vulgare 20 DA... 42 0.003
gb|BM816006.1|BM816006 HC109C12_T3.ab1 HC Hordeum vulgare s... 42 0.003
gb|BI950149.1|BI950149 HVSMEl0019A16f Hordeum vulgare spike... 42 0.003
gb|BF262206.3|BF262206 HV_CEa0003J19f Hordeum vulgare seedl... 42 0.003
gb|BG416961.1|BG416961 HVSMEk0015G09f Hordeum vulgare testa... 40 0.009
emb|X70880.1|HVMYB2G H.vulgare Myb2 gene 30 0.011
gb|BF262578.2|BF262578 HV_CEa0004G02f Hordeum vulgare seedl... 39 0.016
gb|BF619532.3|BF619532 HVSMEc0003P10f Hordeum vulgare seedl... 29 0.020
gb|AL506267.1|AL506267 AL506267 Hordeum vulgare Barke devel... 39 0.022
gb|BF618024.2|BF618024 HVSMEc0003C24f Hordeum vulgare seedl... 39 0.022
gb|BM816004.1|BM816004 HB105F12_SK.ab1 HB Hordeum vulgare s... 39 0.022
gb|BQ470914.1|BQ470914 HX04G18r HX Hordeum vulgare subsp. v... 39 0.022
gb|BF629773.1|BF629773 HVSMEb0013M11f Hordeum vulgare seedl... 38 0.041
gb|BJ471839.1|BJ471839 BJ471839 K. Sato unpublished cDNA li... 32 0.044
gb|AL506268.1|AL506268 AL506268 Hordeum vulgare Barke devel... 37 0.076
gb|BI957930.1|BI957930 HVSMEn0012D18f Hordeum vulgare rachi... 37 0.10
gb|BU998473.1|BU998473 HI11C20r HI Hordeum vulgare subsp. v... 36 0.14
gb|CB883093.1|CB883093 HQ01C22w HQ Hordeum vulgare subsp. v... 35 0.27
gb|CK123590.1|CK123590 BES1824104i24 BES1824 Hordeum vulgar... 26 0.27
gb|BI960298.1|BI960298 HVSMEn0024C09f Hordeum vulgare rachi... 35 0.36
gb|BM442518.2|BM442518 EBan01_SQ003_G12_R anther, yellow st... 35 0.36
gb|BJ471705.1|BJ471705 BJ471705 K. Sato unpublished cDNA li... 34 0.49
gb|BJ471978.1|BJ471978 BJ471978 K. Sato unpublished cDNA li... 34 0.49
gb|BJ469995.1|BJ469995 BJ469995 K. Sato unpublished cDNA li... 34 0.67
gb|BJ472642.1|BJ472642 BJ472642 K. Sato unpublished cDNA li... 34 0.67
gb|BJ470047.1|BJ470047 BJ470047 K. Sato unpublished cDNA li... 31 0.68
gb|BJ454672.1|BJ454672 BJ454672 K. Sato unpublished cDNA li... 31 0.74
gb|AV922837.1|AV922837 AV922837 K. Sato unpublished cDNA li... 31 0.75
gb|BM443593.2|BM443593 EBro02_SQ005_M21_R root, 3 week, hyd... 33 0.92
gb|AL505601.1|AL505601 AL505601 Hordeum vulgare Barke roots... 33 1.3
gb|AV909344.1|AV909344 AV909344 K. Sato unpublished cDNA li... 33 1.3
gb|AV911235.1|AV911235 AV911235 K. Sato unpublished cDNA li... 33 1.3
gb|BE411069.1|BE411069 ISC002.A07F990325 ITEC ISC Barley Le... 29 1.4
gb|BF627413.1|BF627413 HVSMEb0004M17f Hordeum vulgare seedl... 33 1.7
gb|CV053715.1|CV053715 BNEL102d3 Barley EST endosperm libra... 32 2.3
gb|CV055415.1|CV055415 BNEL11D1 Barley EST endosperm librar... 32 2.3
gb|AL506245.1|AL506245 AL506245 Hordeum vulgare Barke devel... 31 3.0
gb|AL509664.1|AL509664 AL509664 Hordeum vulgare Barke devel... 31 3.0
gb|BG369396.1|BG369396 HVSMEi0024D21f Hordeum vulgare 20 DA... 31 3.0
gb|BG309101.2|BG309101 HVSMEc0002D06f Hordeum vulgare seedl... 31 3.0
gb|BG368841.2|BG368841 HVSMEi0020O15f Hordeum vulgare 20 DA... 31 3.0
gb|AV909455.1|AV909455 AV909455 K. Sato unpublished cDNA li... 31 3.0
gb|AV911350.1|AV911350 AV911350 K. Sato unpublished cDNA li... 31 3.0
gb|BQ468848.1|BQ468848 HM02I17r HM Hordeum vulgare subsp. v... 31 3.0
gb|BQ661164.1|BQ661164 HM02D13u HM Hordeum vulgare subsp. v... 31 3.0
gb|BM100735.2|BM100735 EBpi01_SQ001_F05_R pistil, 1 DPA, no... 31 3.0
gb|BM101232.2|BM101232 EBpi01_SQ003_E10_R pistil, 1 DPA, no... 31 3.0
gb|BU990404.1|BU990404 HF24P08r HF Hordeum vulgare subsp. v... 31 3.0
gb|CA002462.1|CA002462 HS07J09r HS Hordeum vulgare subsp. v... 31 3.0
gb|CA006987.1|CA006987 HU06F17r HU Hordeum vulgare subsp. v... 31 3.0
gb|CA022817.1|CA022817 HZ44H04r HZ Hordeum vulgare subsp. v... 31 3.0
gb|CB876723.1|CB876723 HP02D02T HP Hordeum vulgare subsp. v... 31 3.0
gb|CB878516.1|CB878516 HP08N03T HP Hordeum vulgare subsp. v... 31 3.0
gb|CB880890.1|CB880890 HM08C02w HM Hordeum vulgare subsp. v... 31 3.0
gb|CV054726.1|CV054726 BNEL112f2 Barley EST endosperm libra... 31 3.0
gb|CV058234.1|CV058234 BNEL35g6 Barley EST endosperm librar... 31 3.0
gb|AF189727.1|AF189727 Hordeum vulgare NRT2.3 gene, promote... 31 3.0
gb|AF539980.1| Hordeum vulgare subsp. vulgare anther endoxy... 31 3.0
gb|AY541065.1| Hordeum vulgare subsp. vulgare APETALA3-like... 31 3.0
gb|BU974738.1|BU974738 HB28O24r BC Hordeum vulgare subsp. v... 32 3.2
gb|BF260996.2|BF260996 HVSMEf0023H20f Hordeum vulgare seedl... 31 4.1
gb|BI956312.1|BI956312 HVSMEn0002E21f Hordeum vulgare rachi... 31 4.1
gb|BQ466972.1|BQ466972 HS02C14r HS Hordeum vulgare subsp. v... 31 4.1
gb|BF617445.3|BF617445 HVSMEc0017G08f Hordeum vulgare seedl... 31 4.3
gb|BG369253.2|BG369253 HVSMEi0023G17f Hordeum vulgare 20 DA... 31 4.3
gb|AV922828.1|AV922828 AV922828 K. Sato unpublished cDNA li... 31 4.3
gb|AV924475.1|AV924475 AV924475 K. Sato unpublished cDNA li... 31 4.3
gb|AV924476.1|AV924476 AV924476 K. Sato unpublished cDNA li... 31 4.3
gb|AV927549.1|AV927549 AV927549 K. Sato unpublished cDNA li... 31 4.3
gb|AV927559.1|AV927559 AV927559 K. Sato unpublished cDNA li... 31 4.3
gb|AV929566.1|AV929566 AV929566 K. Sato unpublished cDNA li... 31 4.3
gb|AV932316.1|AV932316 AV932316 K. Sato unpublished cDNA li... 31 4.3
gb|AV935165.1|AV935165 AV935165 K. Sato unpublished cDNA li... 31 4.3
gb|BJ447171.1|BJ447171 BJ447171 K. Sato unpublished cDNA li... 31 4.3
gb|BJ469328.1|BJ469328 BJ469328 K. Sato unpublished cDNA li... 31 4.3
gb|BJ471394.1|BJ471394 BJ471394 K. Sato unpublished cDNA li... 31 4.3
gb|BJ472498.1|BJ472498 BJ472498 K. Sato unpublished cDNA li... 31 4.3
gb|BJ472717.1|BJ472717 BJ472717 K. Sato unpublished cDNA li... 31 4.3
gb|BJ473521.1|BJ473521 BJ473521 K. Sato unpublished cDNA li... 31 4.3
gb|BJ474001.1|BJ474001 BJ474001 K. Sato unpublished cDNA li... 31 4.3
gb|BJ474636.1|BJ474636 BJ474636 K. Sato unpublished cDNA li... 31 4.3
gb|BJ476463.1|BJ476463 BJ476463 K. Sato unpublished cDNA li... 31 4.3
gb|BJ476673.1|BJ476673 BJ476673 K. Sato unpublished cDNA li... 31 4.3
gb|BU994484.1|BU994484 HM07D17r HM Hordeum vulgare subsp. v... 31 4.3
gb|BM443536.2|BM443536 EBro02_SQ005_J07_R root, 3 week, hyd... 25 5.3
gb|CV057208.1|CV057208 BNEL25b9 Barley EST endosperm librar... 30 5.7
gb|BE437289.1|BE437289 SFR003.D05F990621 ITEC SFR Barley Le... 31 5.9
gb|BF617511.2|BF617511 HVSMEc0017L20f Hordeum vulgare seedl... 31 5.9
gb|BJ470036.1|BJ470036 BJ470036 K. Sato unpublished cDNA li... 31 5.9
gb|CA029145.1|CA029145 HZ64F11r HZ Hordeum vulgare subsp. v... 31 5.9
gb|AL506561.1|AL506561 AL506561 Hordeum vulgare Barke devel... 30 7.8
gb|AL507398.1|AL507398 AL507398 Hordeum vulgare Barke devel... 30 7.8
gb|AL507709.1|AL507709 AL507709 Hordeum vulgare Barke devel... 30 7.8
gb|AL508576.1|AL508576 AL508576 Hordeum vulgare Barke devel... 30 7.8
gb|AL509112.1|AL509112 AL509112 Hordeum vulgare Barke devel... 30 7.8
gb|BF625905.2|BF625905 HVSMEa0014D11f Hordeum vulgare seedl... 30 7.8
gb|BF620119.2|BF620119 HVSMEc0018C05f Hordeum vulgare seedl... 30 7.8
gb|BF254133.2|BF254133 HVSMEf0003B22f Hordeum vulgare seedl... 30 7.8
gb|BF256933.2|BF256933 HVSMEf0011G15f Hordeum vulgare seedl... 30 7.8
gb|BI949150.1|BI949150 HVSMEl0012J02f Hordeum vulgare spike... 30 7.8
gb|BF065123.1|BF065123 HV_CEb0023E02f Hordeum vulgare seedl... 30 7.8
gb|BF065845.1|BF065845 HV_CEb0014C11f Hordeum vulgare seedl... 30 7.8
gb|BF065868.1|BF065868 HV_CEb0014D11f Hordeum vulgare seedl... 30 7.8
gb|BE216459.2|BE216459 HV_CEb0010I20f Hordeum vulgare seedl... 30 7.8
gb|AW982385.3|AW982385 HVSMEg0003C03f Hordeum vulgare pre-a... 30 7.8
gb|BG345115.2|BG345115 HVSMEg0018M01f Hordeum vulgare pre-a... 30 7.8
gb|BG365829.2|BG365829 HVSMEi0004G07f Hordeum vulgare 20 DA... 30 7.8
gb|BE216075.3|BE216075 HV_CEb0009F09f Hordeum vulgare seedl... 30 7.8
gb|AV915791.1|AV915791 AV915791 K. Sato unpublished cDNA li... 30 7.8
gb|AV917276.1|AV917276 AV917276 K. Sato unpublished cDNA li... 30 7.8
gb|AV924358.1|AV924358 AV924358 K. Sato unpublished cDNA li... 30 7.8
gb|AV924359.1|AV924359 AV924359 K. Sato unpublished cDNA li... 30 7.8
gb|AV924486.1|AV924486 AV924486 K. Sato unpublished cDNA li... 30 7.8
gb|AV924487.1|AV924487 AV924487 K. Sato unpublished cDNA li... 30 7.8
gb|AV924495.1|AV924495 AV924495 K. Sato unpublished cDNA li... 30 7.8
gb|AV932305.1|AV932305 AV932305 K. Sato unpublished cDNA li... 30 7.8
gb|AV932306.1|AV932306 AV932306 K. Sato unpublished cDNA li... 30 7.8
gb|AV932498.1|AV932498 AV932498 K. Sato unpublished cDNA li... 30 7.8
gb|AV933038.1|AV933038 AV933038 K. Sato unpublished cDNA li... 30 7.8
gb|AV934346.1|AV934346 AV934346 K. Sato unpublished cDNA li... 30 7.8
gb|AV934420.1|AV934420 AV934420 K. Sato unpublished cDNA li... 30 7.8
gb|BM815996.1|BM815996 HB106A09_SK.ab1 HB Hordeum vulgare s... 30 7.8
gb|BQ460129.1|BQ460129 HA07C14r HA Hordeum vulgare subsp. v... 30 7.8
gb|BQ467749.1|BQ467749 HS04M03r HS Hordeum vulgare subsp. v... 30 7.8
gb|BQ470429.1|BQ470429 HX02P08r HX Hordeum vulgare subsp. v... 30 7.8
gb|BQ470471.1|BQ470471 HX03B08r HX Hordeum vulgare subsp. v... 30 7.8
gb|BQ471329.1|BQ471329 HV02B22r HV Hordeum vulgare subsp. v... 30 7.8
gb|BQ740219.1|BQ740219 HC114H07 HC Hordeum vulgare subsp. v... 30 7.8
gb|BM442297.2|BM442297 EBan01_SQ002_N09_R anther, yellow st... 30 7.8
gb|BM377891.2|BM377891 EBem04_SQ004_I01_R embryo, 12 DPA, n... 30 7.8
gb|BM100153.2|BM100153 EBma01_SQ001_F16_R maternal, 4 DPA, ... 30 7.8
gb|BI780069.2|BI780069 EBma08_SQ001_F04_R maternal, 28 DPA,... 30 7.8
gb|BM371387.2|BM371387 EBma08_SQ002_I17_R maternal, 28 DPA,... 30 7.8
gb|BM371749.2|BM371749 EBma08_SQ003_N06_R maternal, 28 DPA,... 30 7.8
gb|BI779092.2|BI779092 EBro01_SQ002_P02_R root, 3 week, hyd... 30 7.8
gb|BI779622.2|BI779622 EBro01_SQ004_J17_R root, 3 week, hyd... 30 7.8
gb|BI779644.2|BI779644 EBro01_SQ004_K15_R root, 3 week, hyd... 30 7.8
gb|BM443050.2|BM443050 EBro02_SQ002_F07_R root, 3 week, hyd... 30 7.8
gb|BM443061.2|BM443061 EBro02_SQ002_F21_R root, 3 week, hyd... 30 7.8
gb|BM442971.2|BM442971 EBro02_SQ002_H07_R root, 3 week, hyd... 30 7.8
gb|BM443212.2|BM443212 EBro02_SQ003_B10_R root, 3 week, hyd... 30 7.8
gb|BM443522.2|BM443522 EBro02_SQ005_I12_R root, 3 week, hyd... 30 7.8
gb|BM372137.2|BM372137 EBro03_SQ004_C02_R root, 3 week, wat... 30 7.8
gb|BQ755586.1|BQ755586 EBed07_SQ003_D06_R endosperm, 28 DPA... 30 7.8
gb|BQ756236.1|BQ756236 EBem06_SQ002_P16_R embryo, 21 DPA, n... 30 7.8
gb|BQ760985.1|BQ760985 EBro03_SQ004_A15_R root, 3 week, wat... 30 7.8
gb|BQ762292.1|BQ762292 EBro01_SQ005_K08_R root, 3 week, hyd... 30 7.8
gb|BQ762366.1|BQ762366 EBro01_SQ005_J15_R root, 3 week, hyd... 30 7.8
gb|BQ762871.1|BQ762871 EBro02_SQ006_J10_R root, 3 week, hyd... 30 7.8
gb|BQ764853.1|BQ764853 EBca01_SQ005_H01_R carpel, pre-anthe... 30 7.8
gb|BQ764884.1|BQ764884 EBca01_SQ005_M04_R carpel, pre-anthe... 30 7.8
gb|BQ765201.1|BQ765201 EBro03_SQ006_C15_R root, 3 week, wat... 30 7.8
gb|BQ765473.1|BQ765473 EBro03_SQ007_D07_R root, 3 week, wat... 30 7.8
gb|BQ766370.1|BQ766370 EBro08_SQ005_E21_R root, 3 week, dro... 30 7.8
gb|BQ767060.1|BQ767060 EBro08_SQ007_I23_R root, 3 week, dro... 30 7.8
gb|BQ767520.1|BQ767520 EBro08_SQ009_J05_R root, 3 week, dro... 30 7.8
gb|BU968616.1|BU968616 HB08B03r BC Hordeum vulgare subsp. v... 30 7.8
gb|BU969030.1|BU969030 HB10F05r BC Hordeum vulgare subsp. v... 30 7.8
gb|BU970339.1|BU970339 HB14F15r BC Hordeum vulgare subsp. v... 30 7.8
gb|BU972879.1|BU972879 HB23A05r BC Hordeum vulgare subsp. v... 30 7.8
gb|BU973353.1|BU973353 HB24K13r BC Hordeum vulgare subsp. v... 30 7.8
gb|BU979519.1|BU979519 HA16G19r HA Hordeum vulgare subsp. v... 30 7.8
gb|BU980990.1|BU980990 HA22F01r HA Hordeum vulgare subsp. v... 30 7.8
gb|BU983751.1|BU983751 HA30O19r HA Hordeum vulgare subsp. v... 30 7.8
gb|BU984221.1|BU984221 HF03F08r HF Hordeum vulgare subsp. v... 30 7.8
gb|BU986455.1|BU986455 HF11O18r HF Hordeum vulgare subsp. v... 30 7.8
gb|BU987840.1|BU987840 HF15O14r HF Hordeum vulgare subsp. v... 30 7.8
gb|BU994693.1|BU994693 HM07O01r HM Hordeum vulgare subsp. v... 30 7.8
gb|CA003916.1|CA003916 HS15P04r HS Hordeum vulgare subsp. v... 30 7.8
gb|CA009390.1|CA009390 HU13P22r HU Hordeum vulgare subsp. v... 30 7.8
gb|CA020810.1|CA020810 HZ37N22r HZ Hordeum vulgare subsp. v... 30 7.8
gb|CA021013.1|CA021013 HZ38N05r HZ Hordeum vulgare subsp. v... 30 7.8
gb|CA021486.1|CA021486 HZ40D22r HZ Hordeum vulgare subsp. v... 30 7.8
gb|CA023163.1|CA023163 HZ45G18r HZ Hordeum vulgare subsp. v... 30 7.8
gb|CA023982.1|CA023982 HZ48A10r HZ Hordeum vulgare subsp. v... 30 7.8
gb|CA024983.1|CA024983 HZ50O06r HZ Hordeum vulgare subsp. v... 30 7.8
gb|CA025079.1|CA025079 HZ51C12r HZ Hordeum vulgare subsp. v... 30 7.8
gb|CA025609.1|CA025609 HZ52K11r HZ Hordeum vulgare subsp. v... 30 7.8
gb|CA027501.1|CA027501 HZ59C05r HZ Hordeum vulgare subsp. v... 30 7.8
gb|CA029455.1|CA029455 HZ65E06r HZ Hordeum vulgare subsp. v... 30 7.8
gb|CA029510.1|CA029510 HZ65G21r HZ Hordeum vulgare subsp. v... 30 7.8
gb|CA032871.1|CA032871 HX14H01r HX Hordeum vulgare subsp. v... 30 7.8
gb|BJ546894.1|BJ546894 BJ546894 K. Sato unpublished cDNA li... 30 7.8
gb|BJ546970.1|BJ546970 BJ546970 K. Sato unpublished cDNA li... 30 7.8
gb|BJ547111.1|BJ547111 BJ547111 K. Sato unpublished cDNA li... 30 7.8
gb|BJ547139.1|BJ547139 BJ547139 K. Sato unpublished cDNA li... 30 7.8
gb|BJ547259.1|BJ547259 BJ547259 K. Sato unpublished cDNA li... 30 7.8
gb|BJ547308.1|BJ547308 BJ547308 K. Sato unpublished cDNA li... 30 7.8
gb|BJ547476.1|BJ547476 BJ547476 K. Sato unpublished cDNA li... 30 7.8
gb|BJ547583.1|BJ547583 BJ547583 K. Sato unpublished cDNA li... 30 7.8
gb|BJ547585.1|BJ547585 BJ547585 K. Sato unpublished cDNA li... 30 7.8
gb|BJ548169.1|BJ548169 BJ548169 K. Sato unpublished cDNA li... 30 7.8
gb|BJ549306.1|BJ549306 BJ549306 K. Sato unpublished cDNA li... 30 7.8
gb|CB877226.1|CB877226 HP04A14T HP Hordeum vulgare subsp. v... 30 7.8
gb|CB879002.1|CB879002 HP10J11T HP Hordeum vulgare subsp. v... 30 7.8
gb|CV055722.1|CV055722 BNEL122g2 Barley EST endosperm libra... 30 7.8
gb|CV056842.1|CV056842 BNEL21b7 Barley EST endosperm librar... 30 7.8
gb|CV057251.1|CV057251 BNEL25f7 Barley EST endosperm librar... 30 7.8
gb|CV057366.1|CV057366 BNEL27a3 Barley EST endosperm librar... 30 7.8
gb|CV058928.1|CV058928 BNEL42e4 Barley EST endosperm librar... 30 7.8
gb|CV061732.1|CV061732 BNEL71c7 Barley EST endosperm librar... 30 7.8
gb|BU987688.1|BU987688 HF15H16r HF Hordeum vulgare subsp. v... 30 8.1
gb|BQ763169.1|BQ763169 EBro02_SQ007_N11_R root, 3 week, hyd... 25 9.1
>gb|BU970342.1|BU970342 HB14F18r BC Hordeum vulgare subsp. vulgare cDNA clone HB14F18
5-PRIME, mRNA sequence
Length = 632
Score = 121 bits (264), Expect(2) = 3e-032
Identities = 45/70 (64%), Positives = 56/70 (80%)
Frame = +1 / +1
Query: 280 RWSSEEDEALKQMVKRHGTKNWRTIACAIPGRNANSCLSRWKYLLDPAINKEPWSQQEEL 459
+WS EED+ L QM+ +HG KNW+T+A AIPGR+A C RW+Y +D AINKE WS+QEEL
Sbjct: 421 KWSEEEDKMLTQMINKHGLKNWQTVAHAIPGRSAPQCRQRWRYKIDSAINKEAWSEQEEL 600
Query: 460 RLIRAQQVYG 489
RLIRA Q+YG
Sbjct: 601 RLIRAHQIYG 630
Score = 93.6 bits (202), Expect(2) = 3e-022
Identities = 36/72 (50%), Positives = 50/72 (69%)
Frame = +3 / +3
Query: 273 KTQMVIRGR*GTKANGKKTWDEKLANYCMCYTWPKCQLMPFKMEVPSRPSNKQRALVATG 452
+++MV RGR* +N ++TW EKLAN CYTWPKC MP K+E+ +R NKQ +V T
Sbjct: 414 QSEMVRRGR*DAHSNDQQTWAEKLANCRTCYTWPKCTTMPTKVEIQNRLCNKQGGMVGTR 593
Query: 453 GTKIDPCAASLW 488
G + D C+++LW
Sbjct: 594 GVETDSCSSNLW 629
Score = 79.7 bits (171), Expect(2) = 1e-019
Identities = 40/64 (62%), Positives = 42/64 (65%)
Frame = -3 / -1
Query: 473 ARINLSSSCCDQGSLFIAGSRRYFHLERHELAFRPGIAHAIVRQFFVPCLFTICFSASSS 294
ARI+L+SSC D SLFIA S Y HL RH A RPGIA A V QFF PCL I S SS
Sbjct: 614 ARISLNSSCSDHASLFIAESILYLHLCRHCGALRPGIACATVCQFFSPCLLII*VSILSS 435
Query: 293 SDDH 282
S DH
Sbjct: 434 SSDH 423
Score = 66.2 bits (141), Expect = 5e-011
Identities = 33/73 (45%), Positives = 43/73 (58%)
Frame = -1 / -2
Query: 490 FHKLAAHGSILVPPVATKALCLLLGLEGTSILKGMSWHFGQV*HMQ*FASFSSHVFLPFA 311
FH+ H S+ P V T CLL L S G+ HFGQV*H++ FASFS+HV F
Sbjct: 631 FHRFDEHESVSTPLVPTMPPCLLQSLFCISTFVGIVVHFGQV*HVRQFASFSAHVC*SFE 452
Query: 310 LVPHLPLMTICVF 272
+LPL+TI ++
Sbjct: 451 *ASYLPLLTISLW 413
Score = 66.2 bits (141), Expect(2) = 4e-015
Identities = 38/69 (55%), Positives = 43/69 (62%)
Frame = -2 / -3
Query: 489 SINLLRTDQS*FLLLRPRLFVYCWV*KVLPS*KA*VGISARYSTCNSSPVFRPMSFYHLL 310
SI+L+ T+QS LL RP L VYC V V P A SARYS C+S PVF+PM HL
Sbjct: 630 SIDLMSTNQSQLLLFRPCLLVYCRVYFVSPPLSALWCTSARYSMCDSLPVFQPMFVDHLS 451
Query: 309 *CLIFL**P 283
LIFL *P
Sbjct: 450 EHLIFLF*P 424
Score = 51.0 bits (107), Expect = 3e-006
Identities = 32/70 (45%), Positives = 42/70 (60%)
Frame = +2 / +2
Query: 281 DGHQRKMRH*SKW*KDMGRKTGELLHVLYLAEMPTHAFQDGSTF*TQQ*TKSLGXXXXXX 460
+G +RK+R K +MG KTG+L H+LYLAE+ +A + G T *T Q*T+ G
Sbjct: 422 NGQKRKIRCSLK*STNMG*KTGKLSHMLYLAEVHHNADKGGDTK*TLQ*TRRHGRNKRS* 601
Query: 461 D*SVRSKFME 490
D* V K ME
Sbjct: 602 D*FVLIKSME 631
Score = 35.7 bits (73), Expect(2) = 3e-032
Identities = 18/39 (46%), Positives = 24/39 (61%)
Frame = +3 / +3
Query: 153 E*YTT*NCGTVPRRGIRRDRGTSSQENCPELHGEQ*FQK 269
E YTT*+C T+PR + + R T+ QE P L GE + K
Sbjct: 282 EWYTT*HCQTLPR*RVGKHRRTTLQE*WPLLQGELQYHK 398
Score = 33.9 bits (69), Expect(2) = 1e-019
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = -3 / -1
Query: 251 SVKFWTIFL*GGPSISSDSTPWHSPTVSCGILL 153
S+K W FL P + +S+PW VSCG+ L
Sbjct: 380 SLKEWPSFLQSCPPMFPNSSPWQCLAVSCGVPL 282
Score = 32.1 bits (65), Expect(2) = 4e-015
Identities = 17/34 (50%), Positives = 19/34 (55%)
Frame = -1 / -2
Query: 253 SP*SSGQFSCEEVPLSLLIPRLGTVPQFHVVYYS 152
SP* SG SC+ V L G V Q HVVY+S
Sbjct: 382 SP*RSGHHSCKVVLLCFPTLHRGNVWQCHVVYHS 281
Score = 29.0 bits (58), Expect(2) = 3e-022
Identities = 18/54 (33%), Positives = 22/54 (40%)
Frame = +1 / +1
Query: 115 SSKSDEVAEDMLQSNIPHETVGLCQGVESEEIEGPPHKKIVQNFTESSSSKNKK 276
+S S D S PH+T C G E I G K +F ES S N +
Sbjct: 244 NSTSHSRKADANVSGTPHDTAKHCHGEELGNIGGQLCKNDGHSFKESCSITNSE 405
>gb|AF189788.1|AF189788 Hordeum vulgare putative c-myb-like transcription factor (MYB3R-1)
mRNA, partial cds
Length = 592
Score = 130 bits (284), Expect = 6e-030
Identities = 46/94 (48%), Positives = 66/94 (70%)
Frame = +1 / +3
Query: 274 KHRWSSEEDEALKQMVKRHGTKNWRTIACAIPGRNANSCLSRWKYLLDPAINKEPWSQQE 453
K WS EED+ + +MVK++G K W TIA A+PGR C RW L+P INK+ W+Q+E
Sbjct: 75 KGPWSKEEDDIIVEMVKKYGPKKWSTIAQALPGRIGKQCRERWHNHLNPGINKDAWTQEE 254
Query: 454 ELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEHW 555
E+ LI A ++YGNKW ++ K PG+T++++K HW
Sbjct: 255 EITLIHAHRMYGNKWAELTKFLPGKTDNSIKNHW 356
Score = 71.6 bits (153), Expect = 1e-012
Identities = 43/92 (46%), Positives = 45/92 (48%)
Frame = -3 / -1
Query: 557 FQCSLSASFVLPGKCLTILHHLFP*TCCARINLSSSCCDQGSLFIAGSRRYFHLERHELA 378
FQ L V PGK HLFP A I + SS C SLF+ G R H RH
Sbjct: 358 FQWFLIELSVFPGKNFVNSAHLFPYIR*ACIRVISSSCVHASLFMPGLR*LCHRSRHCFP 179
Query: 377 FRPGIAHAIVRQFFVPCLFTICFSASSSSDDH 282
RPG A AIV FF P FTI SSSS DH
Sbjct: 178 IRPGKAWAIVDHFFGPYFFTISTMISSSSLDH 83
Score = 51.0 bits (107), Expect = 3e-006
Identities = 23/72 (31%), Positives = 38/72 (52%)
Frame = +3 / +2
Query: 315 NGKKTWDEKLANYCMCYTWPKCQLMPFKMEVPSRPSNKQRALVATGGTKIDPCAASLWKQ 494
NGK+ W +++ NYC + + M + S P +KQ + GG C++++WKQ
Sbjct: 116 NGKEIWSKEMVNYCPSFARTYRKAMSGTVAQSS*PWHKQGCMDTGGGNYSYTCSSNVWKQ 295
Query: 495 MV*NGQTFPRQD 530
M * + F R+D
Sbjct: 296 MG*IDKVFTRKD 331
Score = 46.0 bits (96), Expect(2) = 4e-006
Identities = 17/43 (39%), Positives = 27/43 (62%)
Frame = +1 / +3
Query: 367 PGRNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNK 495
PGR CL RW+ +L+P + K PWS++E+ ++ + YG K
Sbjct: 12 PGRTDVQCLHRWQKVLNPELIKGPWSKEEDDIIVEMVKKYGPK 140
Score = 45.1 bits (94), Expect = 2e-004
Identities = 27/88 (30%), Positives = 44/88 (50%)
Frame = -2 / -3
Query: 558 LPMFFECIICPAWEMFDHFTPFVSINLLRTDQS*FLLLRPRLFVYCWV*KVLPS*KA*VG 379
+P+ F I+ +W F+PFVSI+ + +S FLLL P + VY V ++P +
Sbjct: 359 VPVVFN*IVRLSW*KLCQFSPFVSIHSMSMYKSNFLLLCPCILVYARVKMIVPPFPTLLS 180
Query: 378 ISARYSTCNSSPVFRPMSFYHLL*CLIF 295
++ S NS P + YH ++F
Sbjct: 179 YTSWQSLGNS*PFLWTIFLYHFNNDIVF 96
Score = 23.6 bits (46), Expect(2) = 4e-006
Identities = 7/21 (33%), Positives = 10/21 (47%)
Frame = +1 / +3
Query: 493 KWCKMVKHFPGRTNDALKEHW 555
KW + + PGR +E W
Sbjct: 141 KWSTIAQALPGRIGKQCRERW 203
>gb|AL507750.1|AL507750 AL507750 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY06L23V 5',
mRNA sequence
Length = 541
Score = 114 bits (249), Expect = 3e-025
Identities = 41/94 (43%), Positives = 61/94 (64%)
Frame = +1 / +2
Query: 274 KHRWSSEEDEALKQMVKRHGTKNWRTIACAIPGRNANSCLSRWKYLLDPAINKEPWSQQE 453
K WS EEDEAL+++V+RHG +NW I IPGR+ SC RW L P + + P++ +E
Sbjct: 131 KGPWSPEEDEALRRLVERHGARNWTAIGRGIPGRSGKSCRLRWCNQLSPQVERRPFTAEE 310
Query: 454 ELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEHW 555
+ ++RA GN+W + + PGRT++A+K HW
Sbjct: 311 DAAILRAHARLGNRWAAIARLLPGRTDNAVKNHW 412
Score = 57.2 bits (121), Expect = 3e-008
Identities = 36/92 (39%), Positives = 41/92 (44%)
Frame = -3 / -2
Query: 557 FQCSLSASFVLPGKCLTILHHLFP*TCCARINLSSSCCDQGSLFIAGSRRYFHLERHELA 378
FQ L+A V PG + P CAR +SS +G G H RH+L
Sbjct: 414 FQWFLTALSVRPGSRRAMAAQRLPRRACARRMAASSSAVKGRRSTCGESWLHHRSRHDLP 235
Query: 377 FRPGIAHAIVRQFFVPCLFTICFSASSSSDDH 282
RPGI I QF PC T SASSSS H
Sbjct: 234 ERPGIPLPIAVQFRAPCRSTSRRSASSSSGLH 139
>gb|BQ756020.1|BQ756020 EBem05_SQ001_E11_R embryo, 14 DPA, no treatment, cv Optic, EBem05
Hordeum vulgare subsp. vulgare cDNA clone
EBem05_SQ001_E11 5', mRNA sequence
Length = 331
Score = 114 bits (249), Expect = 3e-025
Identities = 41/94 (43%), Positives = 61/94 (64%)
Frame = +1 / +2
Query: 274 KHRWSSEEDEALKQMVKRHGTKNWRTIACAIPGRNANSCLSRWKYLLDPAINKEPWSQQE 453
K WS EEDEAL+++V+RHG +NW I IPGR+ SC RW L P + + P++ +E
Sbjct: 20 KGPWSPEEDEALRRLVERHGARNWTAIGRGIPGRSGKSCRLRWCNQLSPQVERRPFTAEE 199
Query: 454 ELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEHW 555
+ ++RA GN+W + + PGRT++A+K HW
Sbjct: 200 DAAILRAHARLGNRWAAIARLLPGRTDNAVKNHW 301
Score = 57.2 bits (121), Expect = 3e-008
Identities = 36/92 (39%), Positives = 41/92 (44%)
Frame = -3 / -2
Query: 557 FQCSLSASFVLPGKCLTILHHLFP*TCCARINLSSSCCDQGSLFIAGSRRYFHLERHELA 378
FQ L+A V PG + P CAR +SS +G G H RH+L
Sbjct: 303 FQWFLTALSVRPGSRRAMAAQRLPRRACARRMAASSSAVKGRRSTCGESWLHHRSRHDLP 124
Query: 377 FRPGIAHAIVRQFFVPCLFTICFSASSSSDDH 282
RPGI I QF PC T SASSSS H
Sbjct: 123 ERPGIPLPIAVQFRAPCRSTSRRSASSSSGLH 28
>gb|CK124462.1|CK124462 BES1824109d16 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010D169 5-PRIME, mRNA sequence
Length = 809
Score = 109 bits (238), Expect = 1e-023
Identities = 40/94 (42%), Positives = 58/94 (61%)
Frame = +1 / +1
Query: 274 KHRWSSEEDEALKQMVKRHGTKNWRTIACAIPGRNANSCLSRWKYLLDPAINKEPWSQQE 453
K W+ EED+ + +VK +G W IA ++PGR C RW L+P I K+ W+ +E
Sbjct: 286 KGPWTQEEDDKIIDLVKTYGATKWSVIARSLPGRIGKQCRERWHNHLNPDIRKDAWTAEE 465
Query: 454 ELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEHW 555
E LI A + YGNKW ++ K PGRT++++K HW
Sbjct: 466 EQALINAHREYGNKWAEIAKVLPGRTDNSIKNHW 567
Score = 72.5 bits (155), Expect(2) = 5e-014
Identities = 28/79 (35%), Positives = 47/79 (59%)
Frame = +1 / +1
Query: 253 SSSSKNKKHRWSSEEDEALKQMVKRHGTKNWRTIACAIPGRNANSCLSRWKYLLDPAINK 432
S + K W+S+EDE L++ V+ ++W+ IA P R CL RW+ +L+P + K
Sbjct: 109 SGPIRRAKGGWTSQEDETLRKAVETFNGRSWKKIAEFFPDRTEVQCLHRWQKVLNPELIK 288
Query: 433 EPWSQQEELRLIRAQQVYG 489
PW+Q+E+ ++I + YG
Sbjct: 289 GPWTQEEDDKIIDLVKTYG 345
Score = 59.9 bits (127), Expect = 4e-009
Identities = 34/80 (42%), Positives = 41/80 (51%)
Frame = -3 / -1
Query: 530 VLPGKCLTILHHLFP*TCCARINLSSSCCDQGSLFIAGSRRYFHLERHELAFRPGIAHAI 351
VLPG+ I HLFP + A I+ SS Q S ++G R HL RH L RPG A+
Sbjct: 542 VLPGRTFAISAHLFPYSRWALISACSSSAVQASFRMSGFR*LCHLSRHCLPIRPGSDLAM 363
Query: 350 VRQFFVPCLFTICFSASSSS 291
F P +FT SSSS
Sbjct: 362 TDHFVAPYVFTRSIILSSSS 303
Score = 49.6 bits (104), Expect = 7e-006
Identities = 26/95 (27%), Positives = 45/95 (47%)
Frame = -2 / -3
Query: 558 LPMFFECIICPAWEMFDHFTPFVSINLLRTDQS*FLLLRPRLFVYCWV*KVLPS*KA*VG 379
+P+ II P+ + F +F PF+ I + +Q FL P +F Y W+ ++P +
Sbjct: 570 IPVILYRIISPSRKNFCYFCPFIPIFPMGINQCLFLFSSPSIFPYVWIQMIMPPLSTLLA 391
Query: 378 ISARYSTCNSSPVFRPMSFYHLL*CLIFL**PSVF 274
++R C+ P + Y + +IFL P F
Sbjct: 390 YTSR**PCDDGPFCCSIRLYKINNFIIFLLSPGTF 286
Score = 37.5 bits (77), Expect = 0.035
Identities = 25/89 (28%), Positives = 40/89 (44%)
Frame = +3 / +3
Query: 291 RGR*GTKANGKKTWDEKLANYCMCYTWPKCQLMPFKMEVPSRPSNKQRALVATGGTKIDP 470
RGR* + K W K+ + TW Q M ++ S + +R L GT D
Sbjct: 303 RGR**NY*SCKDVWSNKMVRHRKVTTWTYRQAMSREVA*SSESRHTERCLDC*RGTGTD* 482
Query: 471 CAASLWKQMV*NGQTFPRQDK*CTQRTLE 557
C + +W+ M N ++ +D * + +LE
Sbjct: 483 CPSGIWE*MGRNSKSSSWKD**FYKESLE 569
Score = 24.1 bits (47), Expect(2) = 5e-014
Identities = 7/21 (33%), Positives = 10/21 (47%)
Frame = +1 / +1
Query: 493 KWCKMVKHFPGRTNDALKEHW 555
KW + + PGR +E W
Sbjct: 352 KWSVIARSLPGRIGKQCRERW 414
>gb|CK124499.1|CK124499 BES1824109g02 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010G029 5-PRIME, mRNA sequence
Length = 796
Score = 109 bits (238), Expect = 1e-023
Identities = 40/94 (42%), Positives = 58/94 (61%)
Frame = +1 / +1
Query: 274 KHRWSSEEDEALKQMVKRHGTKNWRTIACAIPGRNANSCLSRWKYLLDPAINKEPWSQQE 453
K W+ EED+ + +VK +G W IA ++PGR C RW L+P I K+ W+ +E
Sbjct: 286 KGPWTQEEDDKIIDLVKTYGATKWSVIARSLPGRIGKQCRERWHNHLNPDIRKDAWTAEE 465
Query: 454 ELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEHW 555
E LI A + YGNKW ++ K PGRT++++K HW
Sbjct: 466 EQALINAHREYGNKWAEIAKVLPGRTDNSIKNHW 567
Score = 72.5 bits (155), Expect(2) = 5e-014
Identities = 28/79 (35%), Positives = 47/79 (59%)
Frame = +1 / +1
Query: 253 SSSSKNKKHRWSSEEDEALKQMVKRHGTKNWRTIACAIPGRNANSCLSRWKYLLDPAINK 432
S + K W+S+EDE L++ V+ ++W+ IA P R CL RW+ +L+P + K
Sbjct: 109 SGPIRRAKGGWTSQEDETLRKAVETFNGRSWKKIAEFFPDRTEVQCLHRWQKVLNPELIK 288
Query: 433 EPWSQQEELRLIRAQQVYG 489
PW+Q+E+ ++I + YG
Sbjct: 289 GPWTQEEDDKIIDLVKTYG 345
Score = 59.9 bits (127), Expect = 4e-009
Identities = 34/80 (42%), Positives = 41/80 (51%)
Frame = -3 / -3
Query: 530 VLPGKCLTILHHLFP*TCCARINLSSSCCDQGSLFIAGSRRYFHLERHELAFRPGIAHAI 351
VLPG+ I HLFP + A I+ SS Q S ++G R HL RH L RPG A+
Sbjct: 542 VLPGRTFAISAHLFPYSRWALISACSSSAVQASFRMSGFR*LCHLSRHCLPIRPGSDLAM 363
Query: 350 VRQFFVPCLFTICFSASSSS 291
F P +FT SSSS
Sbjct: 362 TDHFVAPYVFTRSIILSSSS 303
Score = 49.6 bits (104), Expect = 7e-006
Identities = 26/95 (27%), Positives = 45/95 (47%)
Frame = -2 / -2
Query: 558 LPMFFECIICPAWEMFDHFTPFVSINLLRTDQS*FLLLRPRLFVYCWV*KVLPS*KA*VG 379
+P+ II P+ + F +F PF+ I + +Q FL P +F Y W+ ++P +
Sbjct: 570 IPVILYRIISPSRKNFCYFCPFIPIFPMGINQCLFLFSSPSIFPYVWIQMIMPPLSTLLA 391
Query: 378 ISARYSTCNSSPVFRPMSFYHLL*CLIFL**PSVF 274
++R C+ P + Y + +IFL P F
Sbjct: 390 YTSR**PCDDGPFCCSIRLYKINNFIIFLLSPGTF 286
Score = 37.5 bits (77), Expect = 0.035
Identities = 25/89 (28%), Positives = 40/89 (44%)
Frame = +3 / +3
Query: 291 RGR*GTKANGKKTWDEKLANYCMCYTWPKCQLMPFKMEVPSRPSNKQRALVATGGTKIDP 470
RGR* + K W K+ + TW Q M ++ S + +R L GT D
Sbjct: 303 RGR**NY*SCKDVWSNKMVRHRKVTTWTYRQAMSREVA*SSESRHTERCLDC*RGTGTD* 482
Query: 471 CAASLWKQMV*NGQTFPRQDK*CTQRTLE 557
C + +W+ M N ++ +D * + +LE
Sbjct: 483 CPSGIWE*MGRNSKSSSWKD**FYKESLE 569
Score = 24.1 bits (47), Expect(2) = 5e-014
Identities = 7/21 (33%), Positives = 10/21 (47%)
Frame = +1 / +1
Query: 493 KWCKMVKHFPGRTNDALKEHW 555
KW + + PGR +E W
Sbjct: 352 KWSVIARSLPGRIGKQCRERW 414
>gb|CV059557.1|CV059557 BNEL49d7 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL49d7 5' similar to P0020E09.14,
mRNA sequence
Length = 500
Score = 107 bits (233), Expect = 5e-023
Identities = 38/95 (40%), Positives = 56/95 (58%)
Frame = +1 / +1
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTIACAIPGRNANSCLSRWKYLLDPAINKEPWSQQ 450
K WS EED L +V++HG + W I+ +PGR SC RW L P + P++ Q
Sbjct: 52 KTGSWSPEEDALLSALVRQHGARRWSVISAGVPGRTGKSCRLRWCNQLSPDVQHRPFTAQ 231
Query: 451 EELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEHW 555
E+ ++ AQ YGNKW + + PGRT++++K HW
Sbjct: 232 EDALIVAAQARYGNKWADIARLLPGRTDNSVKNHW 336
Score = 51.0 bits (107), Expect = 3e-006
Identities = 31/92 (33%), Positives = 40/92 (43%)
Frame = -3 / -1
Query: 557 FQCSLSASFVLPGKCLTILHHLFP*TCCARINLSSSCCDQGSLFIAGSRRYFHLERHELA 378
FQ L+ V PG+ + HL P* CA +SSC +G +G H+L
Sbjct: 338 FQWFLTELSVRPGRRRAMSAHLLP*RACAATMSASSCAVKGRCCTSGLSWLHQRSLHDLP 159
Query: 377 FRPGIAHAIVRQFFVPCLFTICFSASSSSDDH 282
RPG I PC T S++SSS H
Sbjct: 158 VRPGTPALITLHRRAPCCRTRADSSASSSGLH 63
Score = 31.2 bits (63), Expect = 4.3
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +1 / +1
Query: 262 SKNKKHRWSSEEDEALKQMVKRHGTKNWRTIACAIPGRNANSCLSRW 402
S + +HR + +++AL + W IA +PGR NS + W
Sbjct: 196 SPDVQHRPFTAQEDALIVAAQARYGNKWADIARLLPGRTDNSVKNHW 336
>gb|CV063142.1|CV063142 BNEL87b1 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL87b1 5' similar to P0020E09.14,
mRNA sequence
Length = 696
Score = 107 bits (233), Expect = 5e-023
Identities = 38/95 (40%), Positives = 56/95 (58%)
Frame = +1 / +2
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTIACAIPGRNANSCLSRWKYLLDPAINKEPWSQQ 450
K WS EED L +V++HG + W I+ +PGR SC RW L P + P++ Q
Sbjct: 89 KTGSWSPEEDALLSALVRQHGARRWSVISAGVPGRTGKSCRLRWCNQLSPDVQHRPFTAQ 268
Query: 451 EELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEHW 555
E+ ++ AQ YGNKW + + PGRT++++K HW
Sbjct: 269 EDALIVAAQARYGNKWADIARLLPGRTDNSVKNHW 373
Score = 49.6 bits (104), Expect = 7e-006
Identities = 31/92 (33%), Positives = 39/92 (42%)
Frame = -3 / -1
Query: 557 FQCSLSASFVLPGKCLTILHHLFP*TCCARINLSSSCCDQGSLFIAGSRRYFHLERHELA 378
FQ L+ V PG + HL P* CA +SSC +G +G H+L
Sbjct: 375 FQWFLTELSVRPGXRRAMSAHLLP*RACAATMSASSCAVKGRCCTSGLSWLHQRSLHDLP 196
Query: 377 FRPGIAHAIVRQFFVPCLFTICFSASSSSDDH 282
RPG I PC T S++SSS H
Sbjct: 195 VRPGTPALITLHRRAPCCRTRADSSASSSGLH 100
Score = 31.2 bits (63), Expect = 4.3
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +1 / +2
Query: 262 SKNKKHRWSSEEDEALKQMVKRHGTKNWRTIACAIPGRNANSCLSRW 402
S + +HR + +++AL + W IA +PGR NS + W
Sbjct: 233 SPDVQHRPFTAQEDALIVAAQARYGNKWADIARLLPGRTDNSVKNHW 373
>gb|CV063485.1|CV063485 BNEL8H1 Barley EST endosperm library Hordeum vulgare subsp. vulgare
cDNA clone BNEL8H1 5' similar to P0020E09.14, mRNA
sequence
Length = 594
Score = 107 bits (233), Expect = 5e-023
Identities = 38/95 (40%), Positives = 56/95 (58%)
Frame = +1 / +1
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTIACAIPGRNANSCLSRWKYLLDPAINKEPWSQQ 450
K WS EED L +V++HG + W I+ +PGR SC RW L P + P++ Q
Sbjct: 52 KTGSWSPEEDALLSALVRQHGARRWSVISAGVPGRTGKSCRLRWCNQLSPDVQHRPFTAQ 231
Query: 451 EELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEHW 555
E+ ++ AQ YGNKW + + PGRT++++K HW
Sbjct: 232 EDALIVAAQARYGNKWADIARLLPGRTDNSVKNHW 336
Score = 51.0 bits (107), Expect = 3e-006
Identities = 31/92 (33%), Positives = 40/92 (43%)
Frame = -3 / -2
Query: 557 FQCSLSASFVLPGKCLTILHHLFP*TCCARINLSSSCCDQGSLFIAGSRRYFHLERHELA 378
FQ L+ V PG+ + HL P* CA +SSC +G +G H+L
Sbjct: 338 FQWFLTELSVRPGRRRAMSAHLLP*RACAATMSASSCAVKGRCCTSGLSWLHQRSLHDLP 159
Query: 377 FRPGIAHAIVRQFFVPCLFTICFSASSSSDDH 282
RPG I PC T S++SSS H
Sbjct: 158 VRPGTPALITLHRRAPCCRTRADSSASSSGLH 63
Score = 31.2 bits (63), Expect = 4.3
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +1 / +1
Query: 262 SKNKKHRWSSEEDEALKQMVKRHGTKNWRTIACAIPGRNANSCLSRW 402
S + +HR + +++AL + W IA +PGR NS + W
Sbjct: 196 SPDVQHRPFTAQEDALIVAAQARYGNKWADIARLLPGRTDNSVKNHW 336
>gb|CV057037.1|CV057037 BNEL23d1 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL23d1 5' similar to P0020E09.14,
mRNA sequence
Length = 641
Score = 107 bits (232), Expect = 7e-023
Identities = 38/95 (40%), Positives = 55/95 (57%)
Frame = +1 / +1
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTIACAIPGRNANSCLSRWKYLLDPAINKEPWSQQ 450
K WS EED L +V++HG + W I+ +PGR SC RW L P + P++ Q
Sbjct: 52 KTGSWSPEEDALLSALVRQHGARRWSVISAGVPGRTGKSCRLRWCNQLSPDVQHRPFTAQ 231
Query: 451 EELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEHW 555
E+ ++ AQ YGNKW + + PGRT++ +K HW
Sbjct: 232 EDALIVAAQARYGNKWADIARLLPGRTDNXVKNHW 336
Score = 50.1 bits (105), Expect = 5e-006
Identities = 31/92 (33%), Positives = 39/92 (42%)
Frame = -3 / -1
Query: 557 FQCSLSASFVLPGKCLTILHHLFP*TCCARINLSSSCCDQGSLFIAGSRRYFHLERHELA 378
FQ L+ V PG + HL P* CA +SSC +G +G H+L
Sbjct: 338 FQWFLTXLSVRPGXRRAMSAHLLP*RACAATMSASSCAVKGRCCTSGLSWLHQRSLHDLP 159
Query: 377 FRPGIAHAIVRQFFVPCLFTICFSASSSSDDH 282
RPG I PC T S++SSS H
Sbjct: 158 VRPGTPALITLHRRAPCCRTRADSSASSSGLH 63
>gb|CV053601.1|CV053601 BNEL101a9 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL101a9 5' similar to P0020E09.14,
mRNA sequence
Length = 713
Score = 102 bits (221), Expect = 2e-021
Identities = 35/91 (38%), Positives = 55/91 (60%)
Frame = +1 / +1
Query: 283 WSSEEDEALKQMVKRHGTKNWRTIACAIPGRNANSCLSRWKYLLDPAINKEPWSQQEELR 462
WS EED L +V+++G + W I+ +PGR SC RW + P + P++ QE+
Sbjct: 64 WSPEEDALLSALVRQNGARRWSVISAGVPGRTGKSCRLRWCNQISPDVQHRPFTAQEDSL 243
Query: 463 LIRAQQVYGNKWCKMVKHFPGRTNDALKEHW 555
++ AQ YGNKW + + PGRT++++K HW
Sbjct: 244 IVDAQARYGNKWADIARLLPGRTDNSVKNHW 336
Score = 43.8 bits (91), Expect = 4e-004
Identities = 30/92 (32%), Positives = 37/92 (40%)
Frame = -3 / -1
Query: 557 FQCSLSASFVLPGKCLTILHHLFP*TCCARINLSSSCCDQGSLFIAGSRRYFHLERHELA 378
FQ L+ V PG + HL P* CA SSC +G +G H+L
Sbjct: 338 FQWFLTELSVRPGSRRAMSAHLLP*RACASTMSESSCAVKGRCCTSGLIWLHQRSLHDLP 159
Query: 377 FRPGIAHAIVRQFFVPCLFTICFSASSSSDDH 282
RPG I P T S++SSS H
Sbjct: 158 VRPGTPALITLHRRAPFCRTRADSSASSSGLH 63
>gb|BU998160.1|BU998160 HI10C21r HI Hordeum vulgare subsp. vulgare cDNA clone HI10C21
5-PRIME, mRNA sequence
Length = 478
Score = 97.6 bits (211), Expect = 5e-020
Identities = 37/90 (41%), Positives = 57/90 (63%)
Frame = +1 / +2
Query: 274 KHRWSSEEDEALKQMVKRHGTKNWRTIACAIPGRNANSCLSRWKYLLDPAINKEPWSQQE 453
K WS EED+AL+++V RHG +NW I+ +IPGR+ SC RW L P + P++ E
Sbjct: 209 KGPWSPEEDDALQRLVGRHGARNWSLISKSIPGRSGKSCRLRWCNQLSPQVEHRPFTPDE 388
Query: 454 ELRLIRAQQVYGNKWCKMVKHFPGRTNDAL 543
+ ++RA +GNKW + + GRT++A+
Sbjct: 389 DDTILRAHARFGNKWATIARLLSGRTDNAI 478
Score = 40.2 bits (83), Expect = 0.005
Identities = 29/83 (34%), Positives = 36/83 (43%)
Frame = -3 / -2
Query: 530 VLPGKCLTILHHLFP*TCCARINLSSSCCDQGSLFIAGSRRYFHLERHELAFRPGIAHAI 351
V P ++ HL P AR +SSS +G G H RH+L RPG+ +
Sbjct: 465 VRPESRRAMVAHLLPNLAWARRMVSSSSGVKGRCSTCGESWLHHRRRHDLPDRPGMDLLM 286
Query: 350 VRQFFVPCLFTICFSASSSSDDH 282
Q P T SASSSS H
Sbjct: 285 SDQLRAPWRPTSRCSASSSSGLH 217
>gb|BE519986.1|BE519986 HV_CEb0021P13f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0021P13f, mRNA sequence
Length = 724
Score = 95.8 bits (207), Expect = 2e-019
Identities = 36/91 (39%), Positives = 54/91 (59%)
Frame = +1 / +3
Query: 283 WSSEEDEALKQMVKRHGTKNWRTIACAIPGRNANSCLSRWKYLLDPAINKEPWSQQEELR 462
WS+EED+ L+ + HGT NW IA + A C RW L+ K WS++E++
Sbjct: 201 WSAEEDDVLRAQIAHHGTDNWAVIATQFKDKTARQCRRRWYNYLNTECKKGGWSREEDML 380
Query: 463 LIRAQQVYGNKWCKMVKHFPGRTNDALKEHW 555
L AQ++ GNKW ++ K PGRT++A+K +
Sbjct: 381 LCDAQKLLGNKWTEIAKVVPGRTDNAVKNRF 473
Score = 31.7 bits (64), Expect = 2.2
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = -2 / -3
Query: 540 CIICPAWEMFDHFTPFVSINLLRTDQS*FLLLRPRLFVYCWV*KVLPS 397
CII A + F +F+PFV+ LL L RP F+ + ++PS
Sbjct: 458 CIISSARDNFCYFSPFVTKKLLSIT*KHVLFTRPPAFLALCIQIIVPS 315
>gb|AF189787.1|AF189787 Hordeum vulgare putative c-myb-like transcription factor (MYB3R-1)
gene, partial cds
Length = 2517
Score = 65.3 bits (139), Expect(2) = 1e-017
Identities = 22/44 (50%), Positives = 32/44 (72%)
Frame = +1 / +1
Query: 397 RWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGR 528
RW L+P INK+ W+Q+EE+ LI A ++YGNKW ++ K PG+
Sbjct: 1456 RWHNHLNPGINKDAWTQEEEITLIHAHRMYGNKWAELTKFLPGK 1587
Score = 46.5 bits (97), Expect(2) = 1e-017
Identities = 17/36 (47%), Positives = 24/36 (66%)
Frame = +1 / +2
Query: 295 EDEALKQMVKRHGTKNWRTIACAIPGRNANSCLSRW 402
ED+ + +MVK++G K W TIA A+PGR C R+
Sbjct: 614 EDDIIVEMVKKYGPKKWSTIAQALPGRIGKQCRERY 721
Score = 38.4 bits (79), Expect = 0.030
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +1 / +1
Query: 367 PGRNANSCLSRWKYLLDPAINKEPWSQQ 450
PGR CL RW+ +L+P + K PWS++
Sbjct: 424 PGRTDVQCLHRWQKVLNPELIKGPWSKE 507
Score = 35.3 bits (72), Expect(2) = 1e-005
Identities = 17/42 (40%), Positives = 25/42 (59%)
Frame = -2 / -1
Query: 525 AWEMFDHFTPFVSINLLRTDQS*FLLLRPRLFVYCWV*KVLP 400
+W F+PFVSI+ + +S FLLL P + VY V ++P
Sbjct: 1584 SW*KLCQFSPFVSIHSMSMYKSNFLLLCPCILVYARVKMIVP 1459
Score = 34.8 bits (71), Expect(2) = 1e-005
Identities = 18/33 (54%), Positives = 18/33 (54%)
Frame = -3 / -1
Query: 392 RHELAFRPGIAHAIVRQFFVPCLFTICFSASSS 294
RH RPG A AIV FF P FTI SSS
Sbjct: 711 RHCFPIRPGKAWAIVDHFFGPYFFTISTMISSS 613
Score = 32.6 bits (66), Expect = 1.2
Identities = 19/43 (44%), Positives = 21/43 (48%)
Frame = -3 / -2
Query: 524 PGKCLTILHHLFP*TCCARINLSSSCCDQGSLFIAGSRRYFHL 396
PGK HLFP A I + SS C SLF+ G R HL
Sbjct: 1583 PGKNFVNSAHLFPYIR*ACIRVISSSCVHASLFMPGLR*LCHL 1455
Score = 29.4 bits (59), Expect(2) = 0.097
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +3 / +3
Query: 417 PSNKQRALVATGGTKIDPCAASLWKQMV*NGQTFPRQ 527
P +KQ + GG C++++WKQM * + F R+
Sbjct: 1476 PWHKQGCMDTGGGNYSYTCSSNVWKQMG*IDKVFTRK 1586
Score = 27.2 bits (54), Expect(2) = 0.097
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = +3 / +1
Query: 315 NGKKTWDEKLANYC 356
NGK+ W +++ NYC
Sbjct: 634 NGKEIWSKEMVNYC 675
>gb|BM101125.2|BM101125 EBpi01_SQ002_P05_R pistil, 1 DPA, no treatment, cv Optic, EBpi01
Hordeum vulgare subsp. vulgare cDNA clone
EBpi01_SQ002_P05 5', mRNA sequence
Length = 308
Score = 86.4 bits (186), Expect = 1e-016
Identities = 30/77 (38%), Positives = 47/77 (61%)
Frame = +1 / +2
Query: 283 WSSEEDEALKQMVKRHGTKNWRTIACAIPGRNANSCLSRWKYLLDPAINKEPWSQQEELR 462
WS EED AL+++V+RHG +NW I +PGR+ SC RW L P + + P++ +E+
Sbjct: 77 WSPEEDGALRRLVERHGARNWTAIGRGVPGRSGKSCRLRWCNQLSPGVERXPFTAEEDAA 256
Query: 463 LIRAQQVYGNKWCKMVK 513
+ RA GN+W + +
Sbjct: 257 IARAHARLGNRWAAIAR 307
Score = 45.1 bits (94), Expect = 2e-004
Identities = 27/72 (37%), Positives = 31/72 (43%)
Frame = -3 / -3
Query: 497 HLFP*TCCARINLSSSCCDQGSLFIAGSRRYFHLERHELAFRPGIAHAIVRQFFVPCLFT 318
HLFP CAR +SS +G G H R +L RPG + QF P T
Sbjct: 291 HLFPSRACARAMAASSSAVKGXRSTPGESWLHHRRRQDLPDRPGTPRPMAVQFRAPWRST 112
Query: 317 ICFSASSSSDDH 282
SA SSS H
Sbjct: 111 SRRSAPSSSGLH 76
>gb|BF259477.2|BF259477 HVSMEf0019D12f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0019D12f, mRNA sequence
Length = 577
Score = 65.8 bits (140), Expect(2) = 3e-016
Identities = 25/61 (40%), Positives = 35/61 (57%)
Frame = +1 / +3
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P I + +SQ+EE +++ V GNKW + KH PGRT++ +K
Sbjct: 225 RCGKSCRLRWTNYLKPDIKRGKFSQEEEQTILQLHTVLGNKWSAIAKHLPGRTDNEIKNF 404
Query: 553 W 555
W
Sbjct: 405 W 407
Score = 38.4 bits (79), Expect(2) = 3e-016
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +1 / +3
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTI 354
KK W+SEEDE L +++HG +WR +
Sbjct: 120 KKGPWTSEEDEKLMSYIQKHGHGSWRAL 203
Score = 38.0 bits (78), Expect = 0.026
Identities = 20/54 (37%), Positives = 27/54 (50%)
Frame = -3 / -1
Query: 557 FQCSLSASFVLPGKCLTILHHLFP*TCCARINLSSSCCDQGSLFIAGSRRYFHL 396
FQ L + V PG+C I HL P T C+ + SS + L ++G R HL
Sbjct: 409 FQKFLISLSVRPGRCFAIADHLLPRTVCSWRMVCSSSWENFPLLMSGFR*LVHL 248
>gb|BF617675.2|BF617675 HVSMEc0018K06f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0018K06f, mRNA sequence
Length = 816
Score = 64.0 bits (136), Expect(2) = 2e-014
Identities = 27/62 (43%), Positives = 35/62 (56%)
Frame = +1 / +3
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R+A SCL RWK L P I K + E+ +IR Q +GNKW K+ PGRT L +
Sbjct: 354 RDAKSCLERWKNYLRPGIKKGSLTDDEQRLVIRLQAKHGNKWKKIAAEVPGRTAKRLGKW 533
Query: 553 WK 558
W+
Sbjct: 534 WE 539
Score = 33.9 bits (69), Expect(2) = 2e-014
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +1 / +3
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTIA 357
++ RW EED L+ V+++G + W +A
Sbjct: 243 ERQRWRPEEDAILRSYVRQYGPREWNLVA 329
>gb|BQ470201.1|BQ470201 HX02B17r HX Hordeum vulgare subsp. vulgare cDNA clone HX02B17
5-PRIME, mRNA sequence
Length = 603
Score = 64.0 bits (136), Expect(2) = 2e-014
Identities = 27/62 (43%), Positives = 35/62 (56%)
Frame = +1 / +3
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R+A SCL RWK L P I K + E+ +IR Q +GNKW K+ PGRT L +
Sbjct: 228 RDAKSCLERWKNYLRPGIKKGSLTDDEQRLVIRLQAKHGNKWKKIAAEVPGRTAKRLGKW 407
Query: 553 WK 558
W+
Sbjct: 408 WE 413
Score = 33.9 bits (69), Expect(2) = 2e-014
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +1 / +3
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTIA 357
++ RW EED L+ V+++G + W +A
Sbjct: 117 ERQRWRPEEDAILRSYVRQYGPREWNLVA 203
>gb|CV062831.1|CV062831 BNEL83e5 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL83e5 5' similar to
OSJNBb0039L24.8, mRNA sequence
Length = 588
Score = 60.4 bits (128), Expect(2) = 2e-014
Identities = 22/61 (36%), Positives = 35/61 (57%)
Frame = +1 / +2
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
RN SC RW L P + +S++EE ++ GNKW ++ +H PGRT++ +K +
Sbjct: 305 RNGKSCRLRWINYLRPGLKHGMFSREEEETVMGLHAALGNKWSQIAQHLPGRTDNEVKNY 484
Query: 553 W 555
W
Sbjct: 485 W 487
Score = 37.5 bits (77), Expect(2) = 2e-014
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +1 / +2
Query: 250 ESSSSKNKKHRWSSEEDEALKQMVKRHGTKNWRTI 354
+ ++++K WS EED+ L+ + RHG W T+
Sbjct: 179 QKPKAQHRKGLWSPEEDQKLRDFIVRHGHSCWSTV 283
Score = 32.6 bits (66), Expect = 1.2
Identities = 20/62 (32%), Positives = 26/62 (41%)
Frame = -3 / -1
Query: 557 FQCSLSASFVLPGKCLTILHHLFP*TCCARINLSSSCCDQGSLFIAGSRRYFHLERHELA 378
FQ ++ V PG+C I HL P + +SSS + F G R H L
Sbjct: 489 FQ*FFTSLSVRPGRCCAI*DHLLPRAAWRPMTVSSSSRENMPCFSPGLR*LIHRSLQLLP 310
Query: 377 FR 372
FR
Sbjct: 309 FR 304
>gb|BU997080.1|BU997080 HI06N15r HI Hordeum vulgare subsp. vulgare cDNA clone HI06N15
5-PRIME, mRNA sequence
Length = 584
Score = 64.0 bits (136), Expect(2) = 2e-014
Identities = 27/62 (43%), Positives = 35/62 (56%)
Frame = +1 / +3
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R+A SCL RWK L P I K + E+ +IR Q +GNKW K+ PGRT L +
Sbjct: 144 RDAKSCLERWKNYLRPGIKKGSLTDDEQRLVIRLQAKHGNKWKKIAAEVPGRTAKRLGKW 323
Query: 553 WK 558
W+
Sbjct: 324 WE 329
Score = 33.9 bits (69), Expect(2) = 2e-014
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +1 / +3
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTIA 357
++ RW EED L+ V+++G + W +A
Sbjct: 33 ERQRWRPEEDAILRSYVRQYGPREWNLVA 119
>gb|CV062377.1|CV062377 BNEL79d11 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL79d11 5' similar to
OSJNBb0039L24.8, mRNA sequence
Length = 558
Score = 60.4 bits (128), Expect(2) = 2e-014
Identities = 22/61 (36%), Positives = 35/61 (57%)
Frame = +1 / +3
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
RN SC RW L P + +S++EE ++ GNKW ++ +H PGRT++ +K +
Sbjct: 279 RNGKSCRLRWINYLRPGLKHGMFSREEEETVMGLHAALGNKWSQIAQHLPGRTDNEVKNY 458
Query: 553 W 555
W
Sbjct: 459 W 461
Score = 37.5 bits (77), Expect(2) = 2e-014
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +1 / +3
Query: 250 ESSSSKNKKHRWSSEEDEALKQMVKRHGTKNWRTI 354
+ ++++K WS EED+ L+ + RHG W T+
Sbjct: 153 QKPKAQHRKGLWSPEEDQKLRDFIVRHGHSCWSTV 257
Score = 32.6 bits (66), Expect = 1.2
Identities = 20/62 (32%), Positives = 26/62 (41%)
Frame = -3 / -3
Query: 557 FQCSLSASFVLPGKCLTILHHLFP*TCCARINLSSSCCDQGSLFIAGSRRYFHLERHELA 378
FQ ++ V PG+C I HL P + +SSS + F G R H L
Sbjct: 463 FQ*FFTSLSVRPGRCCAI*DHLLPRAAWRPMTVSSSSRENMPCFSPGLR*LIHRSLQLLP 284
Query: 377 FR 372
FR
Sbjct: 283 FR 278
>gb|CV056818.1|CV056818 BNEL20h7 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL20h7 5' similar to
OSJNBb0039L24.8, mRNA sequence
Length = 514
Score = 60.4 bits (128), Expect(2) = 2e-014
Identities = 22/61 (36%), Positives = 35/61 (57%)
Frame = +1 / +3
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
RN SC RW L P + +S++EE ++ GNKW ++ +H PGRT++ +K +
Sbjct: 279 RNGKSCRLRWINYLRPGLKHGMFSREEEETVMGLHAALGNKWSQIAQHLPGRTDNEVKNY 458
Query: 553 W 555
W
Sbjct: 459 W 461
Score = 37.5 bits (77), Expect(2) = 2e-014
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +1 / +3
Query: 250 ESSSSKNKKHRWSSEEDEALKQMVKRHGTKNWRTI 354
+ ++++K WS EED+ L+ + RHG W T+
Sbjct: 153 QKPKAQHRKGLWSPEEDQKLRDFIVRHGHSCWSTV 257
Score = 32.6 bits (66), Expect = 1.2
Identities = 20/62 (32%), Positives = 26/62 (41%)
Frame = -3 / -1
Query: 557 FQCSLSASFVLPGKCLTILHHLFP*TCCARINLSSSCCDQGSLFIAGSRRYFHLERHELA 378
FQ ++ V PG+C I HL P + +SSS + F G R H L
Sbjct: 463 FQ*FFTSLSVRPGRCCAI*DHLLPRAAWRPMTVSSSSRENMPCFSPGLR*LIHRSLQLLP 284
Query: 377 FR 372
FR
Sbjct: 283 FR 278
>gb|CV058774.1|CV058774 BNEL40g12 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL40g12 5' similar to
OSJNBb0039L24.8, mRNA sequence
Length = 488
Score = 60.4 bits (128), Expect(2) = 2e-014
Identities = 22/61 (36%), Positives = 35/61 (57%)
Frame = +1 / +3
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
RN SC RW L P + +S++EE ++ GNKW ++ +H PGRT++ +K +
Sbjct: 279 RNGKSCRLRWINYLRPGLKHGMFSREEEETVMGLHAALGNKWSQIAQHLPGRTDNEVKNY 458
Query: 553 W 555
W
Sbjct: 459 W 461
Score = 37.5 bits (77), Expect(2) = 2e-014
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +1 / +3
Query: 250 ESSSSKNKKHRWSSEEDEALKQMVKRHGTKNWRTI 354
+ ++++K WS EED+ L+ + RHG W T+
Sbjct: 153 QKPKAQHRKGLWSPEEDQKLRDFIVRHGHSCWSTV 257
Score = 32.6 bits (66), Expect = 1.2
Identities = 20/62 (32%), Positives = 26/62 (41%)
Frame = -3 / -2
Query: 557 FQCSLSASFVLPGKCLTILHHLFP*TCCARINLSSSCCDQGSLFIAGSRRYFHLERHELA 378
FQ ++ V PG+C I HL P + +SSS + F G R H L
Sbjct: 463 FQ*FFTSLSVRPGRCCAI*DHLLPRAAWRPMTVSSSSRENMPCFSPGLR*LIHRSLQLLP 284
Query: 377 FR 372
FR
Sbjct: 283 FR 278
>gb|CV056415.1|CV056415 BNEL17E10 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL17E10 5' similar to
OSJNBb0039L24.8, mRNA sequence
Length = 479
Score = 60.4 bits (128), Expect(2) = 2e-014
Identities = 22/61 (36%), Positives = 35/61 (57%)
Frame = +1 / +1
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
RN SC RW L P + +S++EE ++ GNKW ++ +H PGRT++ +K +
Sbjct: 199 RNGKSCRLRWINYLRPGLKHGMFSREEEETVMGLHAALGNKWSQIAQHLPGRTDNEVKNY 378
Query: 553 W 555
W
Sbjct: 379 W 381
Score = 37.5 bits (77), Expect(2) = 2e-014
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +1 / +1
Query: 250 ESSSSKNKKHRWSSEEDEALKQMVKRHGTKNWRTI 354
+ ++++K WS EED+ L+ + RHG W T+
Sbjct: 73 QKPKAQHRKGLWSPEEDQKLRDFIVRHGHSCWSTV 177
Score = 32.6 bits (66), Expect = 1.2
Identities = 20/62 (32%), Positives = 26/62 (41%)
Frame = -3 / -1
Query: 557 FQCSLSASFVLPGKCLTILHHLFP*TCCARINLSSSCCDQGSLFIAGSRRYFHLERHELA 378
FQ ++ V PG+C I HL P + +SSS + F G R H L
Sbjct: 383 FQ*FFTSLSVRPGRCCAI*DHLLPRAAWRPMTVSSSSRENMPCFSPGLR*LIHRSLQLLP 204
Query: 377 FR 372
FR
Sbjct: 203 FR 198
>gb|CV058910.1|CV058910 BNEL42d1 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL42d1 5' similar to
OSJNBb0039L24.8, mRNA sequence
Length = 478
Score = 60.4 bits (128), Expect(2) = 2e-014
Identities = 22/61 (36%), Positives = 35/61 (57%)
Frame = +1 / +1
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
RN SC RW L P + +S++EE ++ GNKW ++ +H PGRT++ +K +
Sbjct: 199 RNGKSCRLRWINYLRPGLKHGMFSREEEETVMGLHAALGNKWSQIAQHLPGRTDNEVKNY 378
Query: 553 W 555
W
Sbjct: 379 W 381
Score = 37.5 bits (77), Expect(2) = 2e-014
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +1 / +1
Query: 250 ESSSSKNKKHRWSSEEDEALKQMVKRHGTKNWRTI 354
+ ++++K WS EED+ L+ + RHG W T+
Sbjct: 73 QKPKAQHRKGLWSPEEDQKLRDFIVRHGHSCWSTV 177
Score = 32.6 bits (66), Expect = 1.2
Identities = 20/62 (32%), Positives = 26/62 (41%)
Frame = -3 / -3
Query: 557 FQCSLSASFVLPGKCLTILHHLFP*TCCARINLSSSCCDQGSLFIAGSRRYFHLERHELA 378
FQ ++ V PG+C I HL P + +SSS + F G R H L
Sbjct: 383 FQ*FFTSLSVRPGRCCAI*DHLLPRAAWRPMTVSSSSRENMPCFSPGLR*LIHRSLQLLP 204
Query: 377 FR 372
FR
Sbjct: 203 FR 198
>gb|CV063729.1|CV063729 BNEL92e6 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL92e6 5' similar to
OSJNBb0039L24.8, mRNA sequence
Length = 478
Score = 60.4 bits (128), Expect(2) = 2e-014
Identities = 22/61 (36%), Positives = 35/61 (57%)
Frame = +1 / +1
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
RN SC RW L P + +S++EE ++ GNKW ++ +H PGRT++ +K +
Sbjct: 199 RNGKSCRLRWINYLRPGLKHGMFSREEEETVMGLHAALGNKWSQIAQHLPGRTDNEVKNY 378
Query: 553 W 555
W
Sbjct: 379 W 381
Score = 37.5 bits (77), Expect(2) = 2e-014
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +1 / +1
Query: 250 ESSSSKNKKHRWSSEEDEALKQMVKRHGTKNWRTI 354
+ ++++K WS EED+ L+ + RHG W T+
Sbjct: 73 QKPKAQHRKGLWSPEEDQKLRDFIVRHGHSCWSTV 177
Score = 32.6 bits (66), Expect = 1.2
Identities = 20/62 (32%), Positives = 26/62 (41%)
Frame = -3 / -3
Query: 557 FQCSLSASFVLPGKCLTILHHLFP*TCCARINLSSSCCDQGSLFIAGSRRYFHLERHELA 378
FQ ++ V PG+C I HL P + +SSS + F G R H L
Sbjct: 383 FQ*FFTSLSVRPGRCCAI*DHLLPRAAWRPMTVSSSSRENMPCFSPGLR*LIHRSLQLLP 204
Query: 377 FR 372
FR
Sbjct: 203 FR 198
>gb|BG343686.1|BG343686 HVSMEg0006D17f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0006D17f, mRNA sequence
Length = 1018
Score = 64.0 bits (136), Expect(2) = 2e-014
Identities = 27/62 (43%), Positives = 35/62 (56%)
Frame = +1 / +2
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R+A SCL RWK L P I K + E+ +IR Q +GNKW K+ PGRT L +
Sbjct: 110 RDAKSCLERWKNYLRPGIKKGSLTDDEQRLVIRLQAKHGNKWKKIAAEVPGRTAKRLGKW 289
Query: 553 WK 558
W+
Sbjct: 290 WE 295
Score = 33.5 bits (68), Expect(2) = 2e-014
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +1 / +2
Query: 274 KHRWSSEEDEALKQMVKRHGTKNWRTIA 357
+ RW EED L+ V+++G + W +A
Sbjct: 2 RQRWRPEEDAILRSYVRQYGPREWNLVA 85
>gb|BG343689.1|BG343689 HVSMEg0006D21f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0006D21f, mRNA sequence
Length = 989
Score = 64.0 bits (136), Expect(2) = 2e-014
Identities = 27/62 (43%), Positives = 35/62 (56%)
Frame = +1 / +2
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R+A SCL RWK L P I K + E+ +IR Q +GNKW K+ PGRT L +
Sbjct: 110 RDAKSCLERWKNYLRPGIKKGSLTDDEQRLVIRLQAKHGNKWKKIAAEVPGRTAKRLGKW 289
Query: 553 WK 558
W+
Sbjct: 290 WE 295
Score = 33.5 bits (68), Expect(2) = 2e-014
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +1 / +2
Query: 274 KHRWSSEEDEALKQMVKRHGTKNWRTIA 357
+ RW EED L+ V+++G + W +A
Sbjct: 2 RQRWRPEEDAILRSYVRQYGPREWNLVA 85
>emb|X87690.1|HVRNAGAM1 H.vulgare mRNA for GAMyb protein
Length = 2263
Score = 61.3 bits (130), Expect(2) = 3e-014
Identities = 23/61 (37%), Positives = 34/61 (55%)
Frame = +1 / +2
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P + K ++ +EE +I+ GNKW +M H PGRT++ +K +
Sbjct: 506 RCGKSCRLRWANHLRPNLKKGAFTPEEERLIIQLHSKMGNKWARMAAHLPGRTDNEIKNY 685
Query: 553 W 555
W
Sbjct: 686 W 688
Score = 35.7 bits (73), Expect(2) = 3e-014
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +1 / +2
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTI 354
KK W+S ED L VK+HG NW +
Sbjct: 401 KKGPWTSAEDAILVDYVKKHGEGNWNAV 484
>gb|CA014662.1|CA014662 HT11P22r HT Hordeum vulgare subsp. vulgare cDNA clone HT11P22
5-PRIME, mRNA sequence
Length = 613
Score = 61.3 bits (130), Expect(2) = 3e-014
Identities = 23/61 (37%), Positives = 34/61 (55%)
Frame = +1 / +3
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P + K ++ +EE +I+ GNKW +M H PGRT++ +K +
Sbjct: 291 RCGKSCRLRWANHLRPNLKKGAFTPEEERLIIQLHSKMGNKWARMAAHLPGRTDNEIKNY 470
Query: 553 W 555
W
Sbjct: 471 W 473
Score = 35.7 bits (73), Expect(2) = 3e-014
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +1 / +3
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTI 354
KK W+S ED L VK+HG NW +
Sbjct: 186 KKGPWTSAEDAILVDYVKKHGEGNWNAV 269
>gb|CA013607.1|CA013607 HT08P20r HT Hordeum vulgare subsp. vulgare cDNA clone HT08P20
5-PRIME, mRNA sequence
Length = 569
Score = 61.3 bits (130), Expect(2) = 3e-014
Identities = 23/61 (37%), Positives = 34/61 (55%)
Frame = +1 / +2
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P + K ++ +EE +I+ GNKW +M H PGRT++ +K +
Sbjct: 281 RCGKSCRLRWANHLRPNLKKGAFTPEEERLIIQLHSKMGNKWARMAAHLPGRTDNEIKNY 460
Query: 553 W 555
W
Sbjct: 461 W 463
Score = 35.7 bits (73), Expect(2) = 3e-014
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +1 / +2
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTI 354
KK W+S ED L VK+HG NW +
Sbjct: 176 KKGPWTSAEDAILVDYVKKHGEGNWNAV 259
>gb|BQ761004.1|BQ761004 EBro04_SQ001_O04_R root, 3 week, salt-stressed, cv Optic, EBro04
Hordeum vulgare subsp. vulgare cDNA clone
EBro04_SQ001_O04 5', mRNA sequence
Length = 383
Score = 62.6 bits (133), Expect(2) = 6e-014
Identities = 23/61 (37%), Positives = 35/61 (57%)
Frame = +1 / +2
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P + + +SQQEE ++ Q+ GN+W ++ H PGRT++ +K
Sbjct: 140 RCGKSCRLRWINYLRPDLKRGCFSQQEEDHIVALHQILGNRWSQIASHLPGRTDNEIKNF 319
Query: 553 W 555
W
Sbjct: 320 W 322
Score = 33.0 bits (67), Expect(2) = 6e-014
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +1 / +2
Query: 265 KNKKHRWSSEEDEALKQMVKRHGTKNWRTI 354
K +K WS EEDE L + RHG W ++
Sbjct: 29 KVRKGLWSPEEDEKLYNHIIRHGVGCWSSV 118
Score = 31.7 bits (64), Expect(2) = 0.40
Identities = 21/62 (33%), Positives = 27/62 (43%)
Frame = -3 / -3
Query: 557 FQCSLSASFVLPGKCLTILHHLFP*TCCARINLSSSCCDQGSLFIAGSRRYFHLERHELA 378
FQ L + V PG+C I HL P + SSSC ++ +G R H R L
Sbjct: 324 FQKFLISLSVRPGRCDAI*DHLLPRIWWSATMWSSSCWEKQPRLRSGRR*LIHRRRQLLP 145
Query: 377 FR 372
R
Sbjct: 144 QR 139
Score = 19.1 bits (36), Expect(2) = 0.40
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = -3 / -3
Query: 332 PCLFTICFSASSSSDDH 282
PC S SSSS DH
Sbjct: 96 PCRMMWL*SFSSSSGDH 46
>emb|X70878.1|HVMYB3 H.vulgare myb3 mRNA
Length = 1270
Score = 62.6 bits (133), Expect(2) = 8e-014
Identities = 23/61 (37%), Positives = 35/61 (57%)
Frame = +1 / +2
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P + + +SQQEE ++ Q+ GN+W ++ H PGRT++ +K
Sbjct: 212 RCGKSCRLRWINYLRPDLKRGCFSQQEEDHIVALHQILGNRWSQIASHLPGRTDNEIKNF 391
Query: 553 W 555
W
Sbjct: 392 W 394
Score = 33.0 bits (67), Expect(2) = 8e-014
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +1 / +2
Query: 265 KNKKHRWSSEEDEALKQMVKRHGTKNWRTI 354
K +K WS EEDE L + RHG W ++
Sbjct: 101 KVRKGLWSPEEDEKLYNHIIRHGVGCWSSV 190
Score = 31.7 bits (64), Expect = 2.2
Identities = 21/62 (33%), Positives = 27/62 (43%)
Frame = -3 / -2
Query: 557 FQCSLSASFVLPGKCLTILHHLFP*TCCARINLSSSCCDQGSLFIAGSRRYFHLERHELA 378
FQ L + V PG+C I HL P + SSSC ++ +G R H R L
Sbjct: 396 FQKFLISLSVRPGRCDAI*DHLLPRIWWSATMWSSSCWEKQPRLRSGRR*LIHRRRQLLP 217
Query: 377 FR 372
R
Sbjct: 216 QR 211
>gb|BI946875.1|BI946875 HVSMEl0002J21f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0002J21f, mRNA sequence
Length = 845
Score = 62.6 bits (133), Expect(2) = 8e-014
Identities = 22/61 (36%), Positives = 36/61 (59%)
Frame = +1 / +3
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P + + +S+QEE ++ ++ GN+W ++ KH PGRT++ +K
Sbjct: 186 RCGKSCRLRWINYLRPDLKRGTFSEQEERTILDVHRILGNRWAQIAKHLPGRTDNEVKNF 365
Query: 553 W 555
W
Sbjct: 366 W 368
Score = 33.0 bits (67), Expect(2) = 8e-014
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +1 / +3
Query: 256 SSSKNKKHRWSSEEDEALKQMVKRHGTKNWRTI 354
S K K+ WS EEDE L + HG W +
Sbjct: 66 SKQKVKRGLWSPEEDEKLLSYITAHGHSCWSAV 164
>gb|BQ472089.1|BQ472089 HV04G01r HV Hordeum vulgare subsp. vulgare cDNA clone HV04G01
5-PRIME, mRNA sequence
Length = 296
Score = 70.2 bits (150), Expect(2) = 8e-014
Identities = 25/68 (36%), Positives = 41/68 (60%)
Frame = +1 / +3
Query: 310 KQMVKRHGTKNWRTIACAIPGRNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYG 489
+++V RHG +NW I+ +IPGR+ SC RW L P + P++ E+ ++RA +G
Sbjct: 12 QRLVGRHGARNWSLISKSIPGRSGKSCRLRWCNQLSPQVEHRPFTPDEDDTILRAHARFG 191
Query: 490 NKWCKMVK 513
NKW + +
Sbjct: 192 NKWATIAR 215
Score = 31.7 bits (64), Expect = 2.2
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = -3 / -2
Query: 497 HLFP*TCCARINLSSSCCDQGSLFIAGSRRYFHLERHELAFRPGI 363
HL P AR +SSS +G G H RH+L RPG+
Sbjct: 199 HLLPNLAWARRMVSSSSGVKGRCSTCGESWLHHRRRHDLPDRPGM 65
Score = 24.5 bits (48), Expect(2) = 8e-014
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = +1 / +2
Query: 523 GRTNDALKEHW 555
GRT++A+K HW
Sbjct: 227 GRTDNAIKNHW 259
>gb|BU996472.1|BU996472 HM13L14r HM Hordeum vulgare subsp. vulgare cDNA clone HM13L14
5-PRIME, mRNA sequence
Length = 648
Score = 62.6 bits (133), Expect(2) = 8e-014
Identities = 23/61 (37%), Positives = 35/61 (57%)
Frame = +1 / +2
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P + + +SQQEE ++ Q+ GN+W ++ H PGRT++ +K
Sbjct: 236 RCGKSCRLRWINYLRPDLKRGCFSQQEEDHIVALHQILGNRWSQIASHLPGRTDNEIKNF 415
Query: 553 W 555
W
Sbjct: 416 W 418
Score = 33.0 bits (67), Expect(2) = 8e-014
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +1 / +2
Query: 265 KNKKHRWSSEEDEALKQMVKRHGTKNWRTI 354
K +K WS EEDE L + RHG W ++
Sbjct: 125 KVRKGLWSPEEDEKLYNHIIRHGVGCWSSV 214
Score = 31.7 bits (64), Expect = 2.2
Identities = 21/62 (33%), Positives = 27/62 (43%)
Frame = -3 / -1
Query: 557 FQCSLSASFVLPGKCLTILHHLFP*TCCARINLSSSCCDQGSLFIAGSRRYFHLERHELA 378
FQ L + V PG+C I HL P + SSSC ++ +G R H R L
Sbjct: 420 FQKFLISLSVRPGRCDAI*DHLLPRIWWSATMWSSSCWEKQPRLRSGRR*LIHRRRQLLP 241
Query: 377 FR 372
R
Sbjct: 240 QR 235
>gb|BI959333.1|BI959333 HVSMEn0019E14f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0019E14f, mRNA sequence
Length = 635
Score = 62.6 bits (133), Expect(2) = 8e-014
Identities = 23/61 (37%), Positives = 35/61 (57%)
Frame = +1 / +2
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P + + +SQQEE ++ Q+ GN+W ++ H PGRT++ +K
Sbjct: 227 RCGKSCRLRWINYLRPDLKRGCFSQQEEDHIVALHQILGNRWSQIASHLPGRTDNEIKNF 406
Query: 553 W 555
W
Sbjct: 407 W 409
Score = 33.0 bits (67), Expect(2) = 8e-014
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +1 / +2
Query: 265 KNKKHRWSSEEDEALKQMVKRHGTKNWRTI 354
K +K WS EEDE L + RHG W ++
Sbjct: 116 KVRKGLWSPEEDEKLYNHIIRHGVGCWSSV 205
Score = 31.7 bits (64), Expect = 2.2
Identities = 21/62 (33%), Positives = 27/62 (43%)
Frame = -3 / -3
Query: 557 FQCSLSASFVLPGKCLTILHHLFP*TCCARINLSSSCCDQGSLFIAGSRRYFHLERHELA 378
FQ L + V PG+C I HL P + SSSC ++ +G R H R L
Sbjct: 411 FQKFLISLSVRPGRCDAI*DHLLPRIWWSATMWSSSCWEKQPRLRSGRR*LIHRRRQLLP 232
Query: 377 FR 372
R
Sbjct: 231 QR 226
>gb|BI959020.1|BI959020 HVSMEn0017M09f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0017M09f, mRNA sequence
Length = 656
Score = 55.0 bits (116), Expect(2) = 2e-013
Identities = 21/61 (34%), Positives = 31/61 (50%)
Frame = +1 / +1
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P + ++ EE +I+ V GN+W + PGRT++ +K H
Sbjct: 154 RCGKSCRLRWTNYLRPDLKHGEFTDAEEQTIIKLHSVVGNRWSVIAAQLPGRTDNDVKNH 333
Query: 553 W 555
W
Sbjct: 334 W 336
Score = 39.8 bits (82), Expect(2) = 2e-013
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +1 / +1
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTI 354
K+ +W+ EED L + +HGT+NWR I
Sbjct: 49 KRGQWTPEEDNKLLSYITQHGTRNWRLI 132
>gb|CV058923.1|CV058923 BNEL42e10 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL42e10 5' similar to
OSJNBb0039L24.8, mRNA sequence
Length = 717
Score = 62.6 bits (133), Expect(2) = 2e-013
Identities = 23/61 (37%), Positives = 35/61 (57%)
Frame = +1 / +1
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
RN SC RW L P + +S +EE ++ V GNKW ++ +H PGRT++ +K +
Sbjct: 244 RNGKSCKLRWINYLRPGLKHGMFSPEEEETVMSLHAVLGNKWSRIARHLPGRTDNEVKNY 423
Query: 553 W 555
W
Sbjct: 424 W 426
Score = 45.6 bits (95), Expect = 1e-004
Identities = 26/62 (41%), Positives = 30/62 (48%)
Frame = -3 / -2
Query: 557 FQCSLSASFVLPGKCLTILHHLFP*TCCARINLSSSCCDQGSLFIAGSRRYFHLERHELA 378
FQ L++ VLPGKC IL HL P T I +SSS + F G R H L
Sbjct: 428 FQ*FLTSLSVLPGKCRAILDHLLPRTAWRLITVSSSSGENMPCFSPGRR*LIHRSLQLLP 249
Query: 377 FR 372
FR
Sbjct: 248 FR 243
Score = 31.7 bits (64), Expect(2) = 2e-013
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1 / +1
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTI 354
+K WS EED+ L+ + RHG W +
Sbjct: 139 RKGLWSPEEDQKLRDYILRHGHGCWSAL 222
>gb|BU998112.1|BU998112 HI10A14r HI Hordeum vulgare subsp. vulgare cDNA clone HI10A14
5-PRIME, mRNA sequence
Length = 580
Score = 64.0 bits (136), Expect(2) = 2e-013
Identities = 23/61 (37%), Positives = 36/61 (59%)
Frame = +1 / +1
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P + + +SQ+EE ++ +V GN+W ++ KH PGRT++ +K
Sbjct: 202 RCGKSCRLRWINYLRPDLKRGSFSQEEEALIVELHRVLGNRWAQIAKHLPGRTDNEVKNF 381
Query: 553 W 555
W
Sbjct: 382 W 384
Score = 42.0 bits (87), Expect = 0.001
Identities = 21/53 (39%), Positives = 29/53 (54%)
Frame = -3 / -3
Query: 557 FQCSLSASFVLPGKCLTILHHLFP*TCCARINLSSSCCDQGSLFIAGSRRYFH 399
FQ ++ VLPG+CL I HLFP T + +SS C++ L +G R H
Sbjct: 386 FQKFFTSLSVLPGRCLAIWAHLFPSTLWSSTMRASSSCEKLPLLRSGLR*LIH 228
Score = 30.3 bits (61), Expect(2) = 2e-013
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +1 / +1
Query: 256 SSSKNKKHRWSSEEDEALKQMVKRHGTKNWRTI 354
+ K ++ WS EEDE L + + HG W ++
Sbjct: 82 NKQKVRRGLWSPEEDEKLVKYITAHGHGCWSSV 180
>gb|CA019900.1|CA019900 HV13K14r HV Hordeum vulgare subsp. vulgare cDNA clone HV13K14
5-PRIME, mRNA sequence
Length = 465
Score = 61.3 bits (130), Expect(2) = 2e-013
Identities = 23/61 (37%), Positives = 34/61 (55%)
Frame = +1 / +3
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P + K ++ +EE +I+ GNKW +M H PGRT++ +K +
Sbjct: 132 RCGKSCRLRWANHLRPNLKKGAFTPEEERLIIQLHSKMGNKWARMAAHLPGRTDNEIKNY 311
Query: 553 W 555
W
Sbjct: 312 W 314
Score = 33.0 bits (67), Expect(2) = 2e-013
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +1 / +3
Query: 283 WSSEEDEALKQMVKRHGTKNWRTI 354
W+S ED L VK+HG NW +
Sbjct: 39 WTSAEDAILVDYVKKHGEGNWNAV 110
>gb|AL507585.1|AL507585 AL507585 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY06E05V 5',
mRNA sequence
Length = 666
Score = 61.7 bits (131), Expect(2) = 7e-013
Identities = 24/61 (39%), Positives = 33/61 (54%)
Frame = +1 / +2
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P + K +S EEL + + GNKW +M H PGRT++ +K +
Sbjct: 107 RCGKSCRLRWTNHLRPNLKKGAFSPDEELLIAQLHAQLGNKWARMATHLPGRTDNEIKNY 286
Query: 553 W 555
W
Sbjct: 287 W 289
Score = 30.8 bits (62), Expect(2) = 7e-013
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +1 / +2
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTI 354
+K W++ ED L V++HG NW +
Sbjct: 2 EKGXWTAAEDALLVNHVRQHGEGNWNAV 85
>gb|CB882601.1|CB882601 HL02F10w HL Hordeum vulgare subsp. vulgare cDNA clone HL02F10
3-PRIME, mRNA sequence
Length = 610
Score = 60.8 bits (129), Expect(2) = 7e-013
Identities = 22/61 (36%), Positives = 34/61 (55%)
Frame = +1 / +1
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
RN SC RW L P + +S +EE ++ GNKW ++ +H PGRT++ +K +
Sbjct: 256 RNGKSCRLRWINYLRPGLKHGMFSAEEEETVMSLHAALGNKWSRIARHLPGRTDNEVKNY 435
Query: 553 W 555
W
Sbjct: 436 W 438
Score = 44.7 bits (93), Expect = 2e-004
Identities = 25/62 (40%), Positives = 29/62 (46%)
Frame = -3 / -3
Query: 557 FQCSLSASFVLPGKCLTILHHLFP*TCCARINLSSSCCDQGSLFIAGSRRYFHLERHELA 378
FQ L++ VLPGKC IL HL P I +SSS + F G R H L
Sbjct: 440 FQ*FLTSLSVLPGKCRAILDHLLPRAAWRLITVSSSSAENMPCFSPGRR*LIHRSLQLLP 261
Query: 377 FR 372
FR
Sbjct: 260 FR 255
Score = 31.7 bits (64), Expect(2) = 7e-013
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1 / +1
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTI 354
+K WS EED+ L+ + RHG W +
Sbjct: 151 RKGLWSPEEDQKLRDYILRHGHGCWSAL 234
>gb|CA002506.1|CA002506 HS07L12r HS Hordeum vulgare subsp. vulgare cDNA clone HS07L12
5-PRIME, mRNA sequence
Length = 514
Score = 60.8 bits (129), Expect(2) = 7e-013
Identities = 22/61 (36%), Positives = 34/61 (55%)
Frame = +1 / +1
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
RN SC RW L P + +S +EE ++ GNKW ++ +H PGRT++ +K +
Sbjct: 271 RNGKSCRLRWINYLRPGLKHGMFSAEEEETVMSLHAALGNKWSRIARHLPGRTDNEVKNY 450
Query: 553 W 555
W
Sbjct: 451 W 453
Score = 44.7 bits (93), Expect = 2e-004
Identities = 25/62 (40%), Positives = 29/62 (46%)
Frame = -3 / -3
Query: 557 FQCSLSASFVLPGKCLTILHHLFP*TCCARINLSSSCCDQGSLFIAGSRRYFHLERHELA 378
FQ L++ VLPGKC IL HL P I +SSS + F G R H L
Sbjct: 455 FQ*FLTSLSVLPGKCRAILDHLLPRAAWRLITVSSSSAENMPCFSPGRR*LIHRSLQLLP 276
Query: 377 FR 372
FR
Sbjct: 275 FR 270
Score = 31.7 bits (64), Expect(2) = 7e-013
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1 / +1
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTI 354
+K WS EED+ L+ + RHG W +
Sbjct: 166 RKGLWSPEEDQKLRDYILRHGHGCWSAL 249
>gb|BQ466900.1|BQ466900 HS01O24T HS Hordeum vulgare subsp. vulgare cDNA clone HS01O24
5-PRIME, mRNA sequence
Length = 304
Score = 56.3 bits (119), Expect(2) = 7e-013
Identities = 20/61 (32%), Positives = 35/61 (57%)
Frame = +1 / +2
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R + SC RW L P I + ++ QEE ++ Q ++GN+W + + P RT++ +K +
Sbjct: 119 RCSKSCRLRWTNYLRPGIKRGNFTDQEEKLIVHLQALFGNRWAAIAFYLPERTDNDIKNY 298
Query: 553 W 555
W
Sbjct: 299 W 301
Score = 35.3 bits (72), Expect(2) = 7e-013
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +1 / +2
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTI 354
KK W+ EED L V+ HG NWR +
Sbjct: 14 KKGPWTPEEDLVLVSYVQEHGPGNWRAV 97
>gb|CB876695.1|CB876695 HP02B11T HP Hordeum vulgare subsp. vulgare cDNA clone HP02B11
5-PRIME, mRNA sequence
Length = 637
Score = 56.3 bits (119), Expect(2) = 1e-012
Identities = 22/61 (36%), Positives = 34/61 (55%)
Frame = +1 / +3
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R + SC RW L P I + ++Q EE +I Q + GNKW + + P RT++ +K +
Sbjct: 276 RCSKSCRLRWTNYLRPGIKRGNFTQHEEGIIIHLQALLGNKWAAIASYLPQRTDNDIKNY 455
Query: 553 W 555
W
Sbjct: 456 W 458
Score = 35.7 bits (73), Expect(2) = 1e-012
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +1 / +3
Query: 250 ESSSSKNKKHRWSSEEDEALKQMVKRHGTKNWRTI 354
++ + KK W+ EED L +++HG NWR++
Sbjct: 150 DNGGASVKKGPWTPEEDIILVSYIQQHGPGNWRSV 254
>gb|BQ467188.1|BQ467188 HS02O24r HS Hordeum vulgare subsp. vulgare cDNA clone HS02O24
5-PRIME, mRNA sequence
Length = 363
Score = 55.9 bits (118), Expect(2) = 1e-012
Identities = 20/61 (32%), Positives = 34/61 (55%)
Frame = +1 / +2
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R + SC RW L P I + ++ QEE ++ Q + GN+W + + P RT++ +K +
Sbjct: 119 RCSKSCRLRWTNYLRPGIKRGNFTDQEEKLIVHLQALLGNRWAAIASYLPERTDNDIKNY 298
Query: 553 W 555
W
Sbjct: 299 W 301
Score = 35.3 bits (72), Expect(2) = 1e-012
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +1 / +2
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTI 354
KK W+ EED L V+ HG NWR +
Sbjct: 14 KKGPWTPEEDLVLVSYVQEHGPGNWRAV 97
>gb|BQ463523.1|BQ463523 HI05J08r HI Hordeum vulgare subsp. vulgare cDNA clone HI05J08
5-PRIME, mRNA sequence
Length = 436
Score = 61.3 bits (130), Expect(2) = 1e-012
Identities = 22/61 (36%), Positives = 35/61 (57%)
Frame = +1 / +2
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P + + +SQQEE ++ ++ GN+W ++ H PGRT++ +K
Sbjct: 248 RCGKSCRLRWINYLRPDLKRGSFSQQEEDAIVGLHEILGNRWSQIASHLPGRTDNEIKNF 427
Query: 553 W 555
W
Sbjct: 428 W 430
Score = 42.0 bits (87), Expect = 0.001
Identities = 24/59 (40%), Positives = 28/59 (47%)
Frame = -3 / -2
Query: 557 FQCSLSASFVLPGKCLTILHHLFP*TCCARINLSSSCCDQGSLFIAGSRRYFHLERHEL 381
FQ L + V PGK I HLFP C SSSCC++ F +G R H R L
Sbjct: 432 FQKFLISLSVRPGK*DAICDHLFPRISCRPTMASSSCCEKLPRFRSGRR*LIHRSRQLL 256
Score = 30.3 bits (61), Expect(2) = 1e-012
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +1 / +2
Query: 265 KNKKHRWSSEEDEALKQMVKRHGTKNWRTI 354
K +K WS EEDE L + R+G W ++
Sbjct: 137 KLRKGLWSPEEDEKLYNHIIRYGVGCWSSV 226
>gb|CV053597.1|CV053597 BNEL101a5 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL101a5 5' similar to typical
P-type R2R3 Myb protein, mRNA sequence
Length = 546
Score = 55.9 bits (118), Expect(2) = 3e-012
Identities = 20/61 (32%), Positives = 34/61 (55%)
Frame = +1 / +3
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R + SC RW L P I + ++ QEE ++ Q + GN+W + + P RT++ +K +
Sbjct: 273 RCSKSCRLRWTNYLRPXIKRGNFNDQEEKLIVHLQALLGNRWAAIASYLPERTDNDIKNY 452
Query: 553 W 555
W
Sbjct: 453 W 455
Score = 34.4 bits (70), Expect(2) = 3e-012
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1 / +3
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTI 354
KK W+ EED L ++ HG NWR +
Sbjct: 168 KKGPWTPEEDLMLVSYIQEHGPGNWRAV 251
>gb|BG343209.2|BG343209 HVSMEg0005B14f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0005B14f, mRNA sequence
Length = 935
Score = 55.5 bits (117), Expect(2) = 4e-012
Identities = 22/61 (36%), Positives = 33/61 (54%)
Frame = +1 / +3
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P I + +S +EE +I+ Q+ GN+W + PGRT++ +K
Sbjct: 270 RCGKSCRLRWINYLRPDIKRGNFSDEEEQSIIQLHQLLGNRWSAIAARLPGRTDNEIKNV 449
Query: 553 W 555
W
Sbjct: 450 W 452
Score = 34.4 bits (70), Expect(2) = 4e-012
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +1 / +3
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTI 354
K+ W+ EED+ L + RHG NWR +
Sbjct: 165 KRGPWTPEEDKILVAHIHRHGHGNWRAL 248
>gb|BQ764651.1|BQ764651 EBca01_SQ004_C14_R carpel, pre-anthesis, no treatment, cv Optic,
EBca01 Hordeum vulgare subsp. vulgare cDNA clone
EBca01_SQ004_C14 5', mRNA sequence
Length = 576
Score = 61.3 bits (130), Expect(2) = 8e-012
Identities = 22/62 (35%), Positives = 35/62 (56%)
Frame = +1 / +1
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
RN SC RW L P + + S +E++ + GNKW ++ KH PGRT++ +K +
Sbjct: 205 RNGKSCRLRWLNYLRPGLRRGSISPEEDMVIRELHSRLGNKWSEIAKHLPGRTDNEVKNY 384
Query: 553 WK 558
W+
Sbjct: 385 WR 390
Score = 27.7 bits (55), Expect(2) = 8e-012
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +1 / +1
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTIA 357
+K W+ EED L + +HG +W +A
Sbjct: 100 RKGPWTLEEDLILVGYISQHGEGSWDNLA 186
>gb|BE558747.2|BE558747 HV_CEb0020E02f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0020E02f, mRNA sequence
Length = 796
Score = 51.0 bits (107), Expect(2) = 1e-011
Identities = 18/61 (29%), Positives = 32/61 (52%)
Frame = +1 / +1
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L + + S++E+ +++ GN+W + H PGRT++ +K +
Sbjct: 352 RCGKSCRLRWINYLRDGVRRGNISKEEDDLIVKLHATLGNRWSLIASHLPGRTDNEIKNY 531
Query: 553 W 555
W
Sbjct: 532 W 534
Score = 37.1 bits (76), Expect(2) = 1e-011
Identities = 11/28 (39%), Positives = 20/28 (71%)
Frame = +1 / +1
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTI 354
K+ RW++EED+ L + +HG +WR++
Sbjct: 247 KRGRWTAEEDDILANYIAQHGEGSWRSL 330
>gb|BF620286.3|BF620286 HVSMEc0019F08f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0019F08f, mRNA sequence
Length = 690
Score = 53.2 bits (112), Expect(2) = 1e-011
Identities = 21/61 (34%), Positives = 32/61 (52%)
Frame = +1 / +2
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P I + +S QEE +I+ + GN+W + H RT++ +K +
Sbjct: 164 RCGKSCRLRWTNYLRPDIKRGKFSLQEEQTIIQLHALLGNRWSAIATHLSRRTDNEIKNY 343
Query: 553 W 555
W
Sbjct: 344 W 346
Score = 34.8 bits (71), Expect(2) = 1e-011
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +1 / +2
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTI 354
KK W++EEDE L ++ HG +WR +
Sbjct: 59 KKGPWTTEEDEKLLAHIEEHGHGSWRAL 142
>gb|CA027463.1|CA027463 HZ59A03r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ59A03
5-PRIME, mRNA sequence
Length = 436
Score = 59.5 bits (126), Expect(2) = 2e-011
Identities = 21/62 (33%), Positives = 35/62 (56%)
Frame = +1 / +1
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P + + + +E L ++ Q +GN+W K+ +H PGRT++ +K
Sbjct: 175 RTGKSCRLRWLNYLRPDVRRGNITPEEHLLILDLQARWGNRWSKIARHLPGRTDNEIKNF 354
Query: 553 WK 558
W+
Sbjct: 355 WR 360
Score = 28.1 bits (56), Expect(2) = 2e-011
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +1 / +1
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTIACA 363
+K W+ EED L V +G W T+A A
Sbjct: 70 RKGPWTMEEDLVLANYVAANGEGAWNTLARA 162
>gb|BE559390.2|BE559390 HV_CEb0024H06f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0024H06f, mRNA sequence
Length = 906
Score = 55.5 bits (117), Expect(2) = 3e-011
Identities = 22/61 (36%), Positives = 33/61 (54%)
Frame = +1 / +2
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P I + +S +EE +I+ Q+ GN+W + PGRT++ +K
Sbjct: 266 RCGKSCRLRWINYLRPDIKRGNFSDEEEQSIIQLHQLLGNRWSAIAARLPGRTDNEIKNV 445
Query: 553 W 555
W
Sbjct: 446 W 448
Score = 31.7 bits (64), Expect(2) = 3e-011
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1 / +2
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTI 354
K+ W+ EED+ L + HG NWR +
Sbjct: 161 KRGPWTPEEDKILVAHIHSHGHGNWRAL 244
>gb|BF617565.3|BF617565 HVSMEc0018A12f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0018A12f, mRNA sequence
Length = 777
Score = 55.5 bits (117), Expect(2) = 3e-011
Identities = 22/61 (36%), Positives = 33/61 (54%)
Frame = +1 / +1
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P I + +S +EE +I+ Q+ GN+W + PGRT++ +K
Sbjct: 256 RCGKSCRLRWINYLRPDIKRGNFSDEEEQSIIQLHQLLGNRWSAIAARLPGRTDNEIKNV 435
Query: 553 W 555
W
Sbjct: 436 W 438
Score = 31.7 bits (64), Expect(2) = 3e-011
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1 / +1
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTI 354
K+ W+ EED+ L + HG NWR +
Sbjct: 151 KRGPWTPEEDKILVAHIHSHGHGNWRAL 234
>gb|BQ763917.1|BQ763917 EBro03_SQ005_C21_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ005_C21 5', mRNA sequence
Length = 681
Score = 55.5 bits (117), Expect(2) = 3e-011
Identities = 22/61 (36%), Positives = 33/61 (54%)
Frame = +1 / +2
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P I + +S +EE +I+ Q+ GN+W + PGRT++ +K
Sbjct: 260 RCGKSCRLRWINYLRPDIKRGNFSDEEEQSIIQLHQLLGNRWSAIAARLPGRTDNEIKNV 439
Query: 553 W 555
W
Sbjct: 440 W 442
Score = 31.7 bits (64), Expect(2) = 3e-011
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1 / +2
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTI 354
K+ W+ EED+ L + HG NWR +
Sbjct: 155 KRGPWTPEEDKILVAHIHSHGHGNWRAL 238
>gb|CA032540.1|CA032540 HX13G05r HX Hordeum vulgare subsp. vulgare cDNA clone HX13G05
5-PRIME, mRNA sequence
Length = 639
Score = 55.5 bits (117), Expect(2) = 3e-011
Identities = 22/61 (36%), Positives = 33/61 (54%)
Frame = +1 / +3
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P I + +S +EE +I+ Q+ GN+W + PGRT++ +K
Sbjct: 273 RCGKSCRLRWINYLRPDIKRGNFSDEEEQSIIQLHQLLGNRWSAIAARLPGRTDNEIKNV 452
Query: 553 W 555
W
Sbjct: 453 W 455
Score = 31.7 bits (64), Expect(2) = 3e-011
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1 / +3
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTI 354
K+ W+ EED+ L + HG NWR +
Sbjct: 168 KRGPWTPEEDKILVAHIHSHGHGNWRAL 251
Score = 30.3 bits (61), Expect = 8.1
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = +1 / +3
Query: 343 WRTIACAIPGRNANSCLSRWKYLLDPAINKEPWSQQEE 456
W IA +PGR N + W L ++ QQEE
Sbjct: 396 WSAIAARLPGRTDNEIKNVWHTHLKKRLDPSAQEQQEE 509
>gb|BG300704.1|BG300704 HVSMEb0018B03f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0018B03f, mRNA sequence
Length = 609
Score = 55.5 bits (117), Expect(2) = 3e-011
Identities = 22/61 (36%), Positives = 33/61 (54%)
Frame = +1 / +1
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P I + +S +EE +I+ Q+ GN+W + PGRT++ +K
Sbjct: 271 RCGKSCRLRWINYLRPDIKRGNFSDEEEQSIIQLHQLLGNRWSAIAARLPGRTDNEIKNV 450
Query: 553 W 555
W
Sbjct: 451 W 453
Score = 31.7 bits (64), Expect(2) = 3e-011
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1 / +1
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTI 354
K+ W+ EED+ L + HG NWR +
Sbjct: 166 KRGPWTPEEDKILVAHIHSHGHGNWRAL 249
>gb|BM371065.2|BM371065 EBro04_SQ003_G02_R root, 3 week, salt-stressed, cv Optic, EBro04
Hordeum vulgare subsp. vulgare cDNA clone
EBro04_SQ003_G02 5', mRNA sequence
Length = 604
Score = 55.5 bits (117), Expect(2) = 3e-011
Identities = 22/61 (36%), Positives = 33/61 (54%)
Frame = +1 / +2
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P I + +S +EE +I+ Q+ GN+W + PGRT++ +K
Sbjct: 272 RCGKSCRLRWINYLRPDIKRGNFSDEEEQSIIQLHQLLGNRWSAIAARLPGRTDNEIKNV 451
Query: 553 W 555
W
Sbjct: 452 W 454
Score = 31.7 bits (64), Expect(2) = 3e-011
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1 / +2
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTI 354
K+ W+ EED+ L + HG NWR +
Sbjct: 167 KRGPWTPEEDKILVAHIHSHGHGNWRAL 250
Score = 30.3 bits (61), Expect = 8.1
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = +1 / +2
Query: 343 WRTIACAIPGRNANSCLSRWKYLLDPAINKEPWSQQEE 456
W IA +PGR N + W L ++ QQEE
Sbjct: 395 WSAIAARLPGRTDNEIKNVWHTHLKKRLDPSAQEQQEE 508
>gb|BM371066.2|BM371066 EBro04_SQ003_G03_R root, 3 week, salt-stressed, cv Optic, EBro04
Hordeum vulgare subsp. vulgare cDNA clone
EBro04_SQ003_G03 5', mRNA sequence
Length = 501
Score = 55.5 bits (117), Expect(2) = 3e-011
Identities = 22/61 (36%), Positives = 33/61 (54%)
Frame = +1 / +2
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P I + +S +EE +I+ Q+ GN+W + PGRT++ +K
Sbjct: 272 RCGKSCRLRWINYLRPDIKRGNFSDEEEQSIIQLHQLLGNRWSAIAARLPGRTDNEIKNV 451
Query: 553 W 555
W
Sbjct: 452 W 454
Score = 31.7 bits (64), Expect(2) = 3e-011
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1 / +2
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTI 354
K+ W+ EED+ L + HG NWR +
Sbjct: 167 KRGPWTPEEDKILVAHIHSHGHGNWRAL 250
>gb|BI960347.1|BI960347 HVSMEn0024E22f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0024E22f, mRNA sequence
Length = 669
Score = 53.2 bits (112), Expect(2) = 4e-011
Identities = 20/61 (32%), Positives = 33/61 (54%)
Frame = +1 / +3
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P + + +S +E+ +I+ + GNKW + PGRT++ +K +
Sbjct: 213 RCGKSCRLRWINYLRPDLKRGNFSHEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNY 392
Query: 553 W 555
W
Sbjct: 393 W 395
Score = 33.5 bits (68), Expect(2) = 4e-011
Identities = 14/56 (25%), Positives = 26/56 (46%)
Frame = +1 / +3
Query: 187 QGVESEEIEGPPHKKIVQNFTESSSSKNKKHRWSSEEDEALKQMVKRHGTKNWRTI 354
+G +++ + G K + + K W+ EED+ L +K HG WR++
Sbjct: 24 RGKKADGVIGGGPSKAMGRSPCCEKAHTNKGAWTKEEDDRLTAYIKAHGEGCWRSL 191
>gb|CB883071.1|CB883071 HQ01B16w HQ Hordeum vulgare subsp. vulgare cDNA clone HQ01B16
3-PRIME, mRNA sequence
Length = 535
Score = 57.2 bits (121), Expect(2) = 4e-011
Identities = 20/61 (32%), Positives = 33/61 (54%)
Frame = +1 / +1
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P I + P++ +E +++ + GNKW + PGRT++ +K +
Sbjct: 244 RCGKSCRLRWTNYLRPDIKRGPFTPEEHKSILQLHAIVGNKWSMIAAQLPGRTDNEIKNY 423
Query: 553 W 555
W
Sbjct: 424 W 426
Score = 29.4 bits (59), Expect(2) = 4e-011
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1 / +1
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTI 354
KK W+ EED+ L V+ + NWR +
Sbjct: 139 KKGPWTPEEDKLLVDYVQANAPGNWRML 222
>gb|BF261857.2|BF261857 HV_CEa0002G15f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0002G15f, mRNA sequence
Length = 853
Score = 56.8 bits (120), Expect(2) = 5e-011
Identities = 22/61 (36%), Positives = 33/61 (54%)
Frame = +1 / +2
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P + + +SQ+EE +I + GNKW ++ PGRT++ +K
Sbjct: 335 RCGKSCRLRWINYLRPDLKRGAFSQEEEDLIIHLHSILGNKWSQIAAQLPGRTDNEVKNF 514
Query: 553 W 555
W
Sbjct: 515 W 517
Score = 29.4 bits (59), Expect(2) = 5e-011
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +1 / +2
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTI 354
K+ WS EEDE L + ++G W ++
Sbjct: 230 KRGLWSPEEDEKLMNHIAKYGNGCWSSV 313
>gb|BG369720.1|BG369720 HVSMEi0025K10f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0025K10f, mRNA sequence
Length = 718
Score = 60.4 bits (128), Expect(2) = 5e-011
Identities = 20/62 (32%), Positives = 36/62 (58%)
Frame = +1 / +3
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P + + ++ E+L ++ +GN+W K+ +H PGRT++ +K +
Sbjct: 240 RTGKSCRLRWLNYLRPDVKRGNFTADEQLLILDLHSRWGNRWSKIAQHLPGRTDNEIKNY 419
Query: 553 WK 558
W+
Sbjct: 420 WR 425
Score = 25.9 bits (51), Expect(2) = 5e-011
Identities = 9/38 (23%), Positives = 18/38 (47%)
Frame = +1 / +3
Query: 250 ESSSSKNKKHRWSSEEDEALKQMVKRHGTKNWRTIACA 363
+ ++ ++ W+ +ED L + HG W +A A
Sbjct: 114 QEEEAELRRGPWTVDEDLTLINYISDHGEGRWNALARA 227
>gb|CB877704.1|CB877704 HP05O05T HP Hordeum vulgare subsp. vulgare cDNA clone HP05O05
5-PRIME, mRNA sequence
Length = 520
Score = 60.4 bits (128), Expect(2) = 5e-011
Identities = 20/62 (32%), Positives = 36/62 (58%)
Frame = +1 / +1
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P + + ++ E+L ++ +GN+W K+ +H PGRT++ +K +
Sbjct: 247 RTGKSCRLRWLNYLRPDVKRGNFTADEQLLILDLHSRWGNRWSKIAQHLPGRTDNEIKNY 426
Query: 553 WK 558
W+
Sbjct: 427 WR 432
Score = 25.9 bits (51), Expect(2) = 5e-011
Identities = 9/38 (23%), Positives = 18/38 (47%)
Frame = +1 / +1
Query: 250 ESSSSKNKKHRWSSEEDEALKQMVKRHGTKNWRTIACA 363
+ ++ ++ W+ +ED L + HG W +A A
Sbjct: 121 QEEEAELRRGPWTVDEDLTLINYISDHGEGRWNALARA 234
>gb|BM370838.2|BM370838 EBro04_SQ002_H14_R root, 3 week, salt-stressed, cv Optic, EBro04
Hordeum vulgare subsp. vulgare cDNA clone
EBro04_SQ002_H14 5', mRNA sequence
Length = 455
Score = 54.6 bits (115), Expect(2) = 5e-011
Identities = 22/61 (36%), Positives = 33/61 (54%)
Frame = +1 / +2
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P I + +S +EE +I+ Q+ GN+W + PGRT++ +K
Sbjct: 272 RCGKSCRLRWINYLRPDIKRGNFSDEEEQSIIQLHQLLGNRWSAIAAMLPGRTDNEIKNV 451
Query: 553 W 555
W
Sbjct: 452 W 454
Score = 31.7 bits (64), Expect(2) = 5e-011
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1 / +2
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTI 354
K+ W+ EED+ L + HG NWR +
Sbjct: 167 KRGPWTPEEDKILVAHIHSHGHGNWRAL 250
>emb|X70877.1|HVMYB1 H.vulgare myb1 mRNA
Length = 1284
Score = 53.2 bits (112), Expect(2) = 7e-011
Identities = 20/61 (32%), Positives = 33/61 (54%)
Frame = +1 / +2
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P + + +S +E+ +I+ + GNKW + PGRT++ +K +
Sbjct: 353 RCGKSCRLRWINYLRPDLKRGNFSHEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNY 532
Query: 553 W 555
W
Sbjct: 533 W 535
Score = 32.6 bits (66), Expect(2) = 7e-011
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +1 / +2
Query: 274 KHRWSSEEDEALKQMVKRHGTKNWRTI 354
K W+ EED+ L +K HG WR++
Sbjct: 251 KGAWTKEEDDRLTAYIKAHGEGCWRSL 331
>gb|BF616485.2|BF616485 HVSMEc0010B15f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0010B15f, mRNA sequence
Length = 772
Score = 67.1 bits (143), Expect = 7e-011
Identities = 25/65 (38%), Positives = 40/65 (61%)
Frame = +1 / +3
Query: 274 KHRWSSEEDEALKQMVKRHGTKNWRTIACAIPGRNANSCLSRWKYLLDPAINKEPWSQQE 453
+ R S EEDEAL+++V+RHG +NW I IPGR+ SC RW L + P++ ++
Sbjct: 27 RGRGSPEEDEALRRLVERHGARNWTAIGRGIPGRSGKSCRLRWCNQLSRGVEHRPFTAED 206
Query: 454 ELRLI 468
+ ++
Sbjct: 207 DADIL 221
Score = 39.3 bits (81), Expect = 0.010
Identities = 24/62 (38%), Positives = 28/62 (45%)
Frame = -3 / -1
Query: 476 CARINLSSSCCDQGSLFIAGSRRYFHLERHELAFRPGIAHAIVRQFFVPCLFTICFSASS 297
C + +SS +G H RH+L RPGI I QF PC T SASS
Sbjct: 229 CNKRMSASSSAVKGRCSTPRDNWLHHRNRHDLPERPGIPLPIAVQFRAPCRSTSRRSASS 50
Query: 296 SS 291
SS
Sbjct: 49 SS 44
>gb|BF259663.3|BF259663 HVSMEf0019O20f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0019O20f, mRNA sequence
Length = 528
Score = 52.8 bits (111), Expect(2) = 9e-011
Identities = 19/61 (31%), Positives = 33/61 (54%)
Frame = +1 / +2
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P + + +S+ E+ +++ + GNKW + PGRT++ +K +
Sbjct: 209 RCGKSCRLRWINYLRPDLKRGNFSRDEDELIVKLHSLLGNKWSLIAARLPGRTDNEIKNY 388
Query: 553 W 555
W
Sbjct: 389 W 391
Score = 32.6 bits (66), Expect(2) = 9e-011
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +1 / +2
Query: 274 KHRWSSEEDEALKQMVKRHGTKNWRTIACA 363
K W+ EEDE L V+ HG WR++ A
Sbjct: 107 KGAWTREEDERLVAHVRAHGEGCWRSLPSA 196
>gb|BM816803.1|BM816803 HC114B11_SK.ab1 HC Hordeum vulgare subsp. vulgare cDNA clone
HC114B11_SK.ab1 similar to myb protein homolog - rice
gi|1946265|emb|CAA72217.1| (Y11414) myb [Oryza sativa],
mRNA sequence
Length = 879
Score = 50.5 bits (106), Expect(2) = 1e-010
Identities = 20/61 (32%), Positives = 32/61 (52%)
Frame = +1 / +2
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P I + ++ +EE +I+ + GN+W + PGRT++ +K
Sbjct: 305 RCGKSCRLRWINYLRPDIKRGNFTSEEEDAIIQLHAMLGNRWSTIAARLPGRTDNEIKNV 484
Query: 553 W 555
W
Sbjct: 485 W 487
Score = 34.4 bits (70), Expect(2) = 1e-010
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +1 / +2
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTI 354
K+ W++EED L +++HG NWR +
Sbjct: 200 KRGPWTAEEDMTLVAHIEQHGHSNWRAL 283
>gb|BM443626.2|BM443626 EBro02_SQ005_P07_R root, 3 week, hydroponic grown, low nitrogen, cv
Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone
EBro02_SQ005_P07 5', mRNA sequence
Length = 523
Score = 50.5 bits (106), Expect(2) = 1e-010
Identities = 20/61 (32%), Positives = 32/61 (52%)
Frame = +1 / +2
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P I + ++ +EE +I+ + GN+W + PGRT++ +K
Sbjct: 275 RCGKSCRLRWINYLRPDIKRGNFTSEEEDAIIQLHAMLGNRWSTIAARLPGRTDNEIKNV 454
Query: 553 W 555
W
Sbjct: 455 W 457
Score = 34.4 bits (70), Expect(2) = 1e-010
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +1 / +2
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTI 354
K+ W++EED L +++HG NWR +
Sbjct: 170 KRGPWTAEEDMTLVAHIEQHGHSNWRAL 253
>gb|AY672068.1| Hordeum vulgare subsp. vulgare myb transcription factor mRNA,
complete cds
Length = 1542
Score = 51.4 bits (108), Expect(2) = 2e-010
Identities = 19/61 (31%), Positives = 31/61 (50%)
Frame = +1 / +2
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P + + +S EE ++ + GN+W ++ PGRT++ +K
Sbjct: 287 RCGKSCRLRWINYLRPDLKRGAFSPHEEDLIVNLHAILGNRWSQIAARLPGRTDNEIKNF 466
Query: 553 W 555
W
Sbjct: 467 W 469
Score = 32.6 bits (66), Expect(2) = 2e-010
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +1 / +2
Query: 253 SSSSKNKKHRWSSEEDEALKQMVKRHGTKNWRTIA 357
++++K +K WS EEDE L + R G +W +A
Sbjct: 164 AAAAKLRKGLWSPEEDERLVAYMLRSGQGSWSDVA 268
>gb|BQ753632.1|BQ753632 EBan01_SQ004_M23_R anther, yellow stage, no treatment, cv Optic,
EBan01 Hordeum vulgare subsp. vulgare cDNA clone
EBan01_SQ004_M23 5', mRNA sequence
Length = 416
Score = 60.8 bits (129), Expect(2) = 4e-010
Identities = 23/61 (37%), Positives = 35/61 (57%)
Frame = +1 / +3
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P + K P+S +EE ++R + GNKW ++ PGRT++ +K +
Sbjct: 72 RCGKSCRLRWANHLRPNLRKGPFSPEEERLILRLHGLIGNKWARISAQLPGRTDNEVKNY 251
Query: 553 W 555
W
Sbjct: 252 W 254
Score = 31.2 bits (63), Expect = 3.0
Identities = 22/62 (35%), Positives = 27/62 (43%)
Frame = -3 / -2
Query: 557 FQCSLSASFVLPGKCLTILHHLFP*TCCARINLSSSCCDQGSLFIAGSRRYFHLERHELA 378
FQ L++ VLPG C + HL P R SS ++G L G R H R L
Sbjct: 256 FQ*FLTSLSVLPGSCAEMRAHLLPMRPWRRRMRRSSSGEKGPLRRLGRRWLAHRSRQLLP 77
Query: 377 FR 372
R
Sbjct: 76 QR 71
Score = 21.8 bits (42), Expect(2) = 4e-010
Identities = 6/12 (50%), Positives = 8/12 (66%)
Frame = +1 / +3
Query: 319 VKRHGTKNWRTI 354
V+RHG NW +
Sbjct: 15 VRRHGEGNWNAV 50
>gb|BG301022.1|BG301022 HVSMEb0019E16f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0019E16f, mRNA sequence
Length = 625
Score = 50.1 bits (105), Expect(2) = 1e-009
Identities = 18/61 (29%), Positives = 32/61 (52%)
Frame = +1 / +2
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P + + ++ ++ +I+ + GNKW + PGRT++ +K +
Sbjct: 221 RCGKSCRLRWMNYLRPDLKRGNFTDDDDELIIKLHALLGNKWSLIAGQLPGRTDNEIKNY 400
Query: 553 W 555
W
Sbjct: 401 W 403
Score = 31.2 bits (63), Expect(2) = 1e-009
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +1 / +2
Query: 274 KHRWSSEEDEALKQMVKRHGTKNWRTI 354
K W+ EED+ L +K HG WR++
Sbjct: 119 KGAWTKEEDQRLIGYIKAHGEGCWRSL 199
>gb|BG301049.1|BG301049 HVSMEb0019G16f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0019G16f, mRNA sequence
Length = 624
Score = 50.1 bits (105), Expect(2) = 1e-009
Identities = 18/61 (29%), Positives = 32/61 (52%)
Frame = +1 / +2
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P + + ++ ++ +I+ + GNKW + PGRT++ +K +
Sbjct: 221 RCGKSCRLRWMNYLRPDLKRGNFTDDDDELIIKLHALLGNKWSLIAGQLPGRTDNEIKNY 400
Query: 553 W 555
W
Sbjct: 401 W 403
Score = 31.2 bits (63), Expect(2) = 1e-009
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +1 / +2
Query: 274 KHRWSSEEDEALKQMVKRHGTKNWRTI 354
K W+ EED+ L +K HG WR++
Sbjct: 119 KGAWTKEEDQRLIGYIKAHGEGCWRSL 199
>gb|CA007589.1|CA007589 HU08G21r HU Hordeum vulgare subsp. vulgare cDNA clone HU08G21
5-PRIME, mRNA sequence
Length = 263
Score = 62.2 bits (132), Expect = 2e-009
Identities = 22/62 (35%), Positives = 37/62 (59%)
Frame = +1 / +3
Query: 283 WSSEEDEALKQMVKRHGTKNWRTIACAIPGRNANSCLSRWKYLLDPAINKEPWSQQEELR 462
W + EDE LK V ++G W I+ + ++A C +RW LDP+I K W+++E+ +
Sbjct: 57 WKNTEDEILKAAVMKYGKNQWARISSLLVRKSAKQCKARWYEWLDPSIKKTEWTREEDEK 236
Query: 463 LI 468
L+
Sbjct: 237 LL 242
>emb|X70876.1|HVMYB2 H.vulgare myb2 mRNA
Length = 1102
Score = 53.2 bits (112), Expect(2) = 2e-009
Identities = 20/61 (32%), Positives = 32/61 (52%)
Frame = +1 / +2
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P + + ++ E+ +IR + GNKW + PGRT++ +K +
Sbjct: 185 RCGKSCRLRWMNYLRPDLKRGNFTDDEDELIIRLHSLLGNKWSLIAGQLPGRTDNEIKNY 364
Query: 553 W 555
W
Sbjct: 365 W 367
Score = 27.2 bits (54), Expect(2) = 2e-009
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = +1 / +2
Query: 274 KHRWSSEEDEALKQMVKRHGTKNWRTI 354
K W+ EED+ L ++ +G WR++
Sbjct: 83 KGAWTKEEDQRLIAYIRANGEGCWRSL 163
>gb|BF627287.2|BF627287 HVSMEb0004H07f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0004H07f, mRNA sequence
Length = 756
Score = 53.2 bits (112), Expect(2) = 3e-009
Identities = 20/61 (32%), Positives = 32/61 (52%)
Frame = +1 / +1
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P + + ++ E+ +IR + GNKW + PGRT++ +K +
Sbjct: 193 RCGKSCRLRWMNYLRPDLKRGNFTDDEDELIIRLHSLLGNKWSLIAGQLPGRTDNEIKNY 372
Query: 553 W 555
W
Sbjct: 373 W 375
Score = 27.2 bits (54), Expect(2) = 3e-009
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = +1 / +1
Query: 274 KHRWSSEEDEALKQMVKRHGTKNWRTI 354
K W+ EED+ L ++ +G WR++
Sbjct: 91 KGAWTKEEDQRLIAYIRANGEGCWRSL 171
>gb|AV914947.1|AV914947 AV914947 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags9c13 5', mRNA sequence
Length = 506
Score = 50.5 bits (106), Expect(2) = 3e-009
Identities = 20/61 (32%), Positives = 32/61 (52%)
Frame = +1 / +2
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P I + ++ +EE +I+ + GN+W + PGRT++ +K
Sbjct: 113 RCGKSCRLRWINYLRPDIKRGNFTSEEEGAIIQLHAMLGNRWSTIAARLPGRTDNEIKNV 292
Query: 553 W 555
W
Sbjct: 293 W 295
Score = 29.4 bits (59), Expect(2) = 3e-009
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +1 / +2
Query: 274 KHRWSSEEDEALKQMVKRHGTKNWRTI 354
+ R ++EED L +++HG NWR +
Sbjct: 11 RGRGTAEEDMTLVAHIEQHGHSNWRAL 91
>gb|BI957410.1|BI957410 HVSMEn0009G13f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0009G13f, mRNA sequence
Length = 673
Score = 54.1 bits (114), Expect(2) = 5e-009
Identities = 22/61 (36%), Positives = 33/61 (54%)
Frame = +1 / +2
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P I + +S +EE +I+ Q+ GN+W + PGRT++ +K
Sbjct: 92 RCGKSCRLRWINYLRPDIKRGNFSDEEEQSIIQLHQLLGNRWSAIAARLPGRTDN*IKNV 271
Query: 553 W 555
W
Sbjct: 272 W 274
Score = 25.4 bits (50), Expect(2) = 5e-009
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +1 / +2
Query: 292 EEDEALKQMVKRHGTKNWRTI 354
EED+ L + HG NWR +
Sbjct: 8 EEDKILVAHIHSHGHGNWRAL 70
>gb|BQ460434.1|BQ460434 HA09K10r HA Hordeum vulgare subsp. vulgare cDNA clone HA09K10
5-PRIME, mRNA sequence
Length = 613
Score = 54.6 bits (115), Expect(2) = 5e-009
Identities = 18/62 (29%), Positives = 33/62 (53%)
Frame = +1 / +2
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P + + + EE ++ +GN+W ++ + PGRT++ +K +
Sbjct: 254 RTGKSCRLRWVNYLHPGLKRGRMTPHEERLILELHARWGNRWSRIARKLPGRTDNEIKNY 433
Query: 553 WK 558
W+
Sbjct: 434 WR 439
Score = 25.0 bits (49), Expect(2) = 5e-009
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = +1 / +2
Query: 265 KNKKHRWSSEEDEALKQMVKRHGTKNWRTIA 357
+ +K W+ +ED L V+ G + W IA
Sbjct: 143 ETRKGPWTEQEDMQLVCTVRLFGERRWDFIA 235
>gb|BM371860.2|BM371860 EBma08_SQ004_D12_R maternal, 28 DPA, no treatment, cv Optic, EBma08
Hordeum vulgare subsp. vulgare cDNA clone
EBma08_SQ004_D12 5', mRNA sequence
Length = 594
Score = 54.6 bits (115), Expect(2) = 5e-009
Identities = 18/62 (29%), Positives = 33/62 (53%)
Frame = +1 / +1
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P + + + EE ++ +GN+W ++ + PGRT++ +K +
Sbjct: 298 RTGKSCRLRWVNYLHPGLKRGRMTPHEERLILELHARWGNRWSRIARKLPGRTDNEIKNY 477
Query: 553 WK 558
W+
Sbjct: 478 WR 483
Score = 25.0 bits (49), Expect(2) = 5e-009
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = +1 / +1
Query: 265 KNKKHRWSSEEDEALKQMVKRHGTKNWRTIA 357
+ +K W+ +ED L V+ G + W IA
Sbjct: 187 ETRKGPWTEQEDMQLVCTVRLFGERRWDFIA 279
>gb|BU975705.1|BU975705 HB32A20r BC Hordeum vulgare subsp. vulgare cDNA clone HB32A20
5-PRIME, mRNA sequence
Length = 574
Score = 54.6 bits (115), Expect(2) = 5e-009
Identities = 18/62 (29%), Positives = 33/62 (53%)
Frame = +1 / +2
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P + + + EE ++ +GN+W ++ + PGRT++ +K +
Sbjct: 308 RTGKSCRLRWVNYLHPGLKRGRMTPHEERLILELHARWGNRWSRIARKLPGRTDNEIKNY 487
Query: 553 WK 558
W+
Sbjct: 488 WR 493
Score = 25.0 bits (49), Expect(2) = 5e-009
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = +1 / +2
Query: 265 KNKKHRWSSEEDEALKQMVKRHGTKNWRTIA 357
+ +K W+ +ED L V+ G + W IA
Sbjct: 197 ETRKGPWTEQEDMQLVCTVRLFGERRWDFIA 289
>gb|CK123641.1|CK123641 BES1824104m18 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010M184 5-PRIME, mRNA sequence
Length = 506
Score = 54.1 bits (114), Expect(2) = 5e-009
Identities = 21/61 (34%), Positives = 32/61 (52%)
Frame = +1 / +1
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P I + S EE ++R ++ GN+W + PGRT++ +K +
Sbjct: 166 RCGKSCRLRWLNYLRPGIKRGNISDDEEELIVRLHRLLGNRWSLIAGRLPGRTDNEIKNY 345
Query: 553 W 555
W
Sbjct: 346 W 348
Score = 25.4 bits (50), Expect(2) = 5e-009
Identities = 7/24 (29%), Positives = 13/24 (54%)
Frame = +1 / +1
Query: 283 WSSEEDEALKQMVKRHGTKNWRTI 354
W++ ED+ L + HG W ++
Sbjct: 73 WTAMEDDILVSYINEHGEGKWGSL 144
>gb|BU975173.1|BU975173 HB30F02r BC Hordeum vulgare subsp. vulgare cDNA clone HB30F02
5-PRIME, mRNA sequence
Length = 425
Score = 54.6 bits (115), Expect(2) = 5e-009
Identities = 18/62 (29%), Positives = 33/62 (53%)
Frame = +1 / +2
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P + + + EE ++ +GN+W ++ + PGRT++ +K +
Sbjct: 116 RTGKSCRLRWVNYLHPGLKRGRMTPHEERLILELHARWGNRWSRIARKLPGRTDNEIKNY 295
Query: 553 WK 558
W+
Sbjct: 296 WR 301
Score = 24.5 bits (48), Expect(2) = 5e-009
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = +1 / +2
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTIA 357
+K W+ +ED L V+ G + W IA
Sbjct: 11 RKGPWTEQEDMQLVCTVRLFGERRWDFIA 97
>gb|AL507948.1|AL507948 AL507948 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY07F08V 5',
mRNA sequence
Length = 631
Score = 60.4 bits (128), Expect = 7e-009
Identities = 20/62 (32%), Positives = 36/62 (58%)
Frame = +1 / +2
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P + + ++ E+L ++ +GN+W K+ +H PGRT++ +K +
Sbjct: 74 RTGKSCRLRWLNYLRPDVKRGNFTADEQLLILDLHSRWGNRWSKIAQHLPGRTDNEIKNY 253
Query: 553 WK 558
W+
Sbjct: 254 WR 259
>emb|X70881.1|HVMYB3G H.vulgare myb3 gene
Length = 3241
Score = 37.5 bits (77), Expect(3) = 7e-009
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +1 / +3
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKH 516
R SC RW L P + + +SQQEE ++ Q+ GN++ ++ H
Sbjct: 1212 RCGKSCRLRWINYLRPDLKRGCFSQQEEDHIVALHQILGNRFVQLRIH 1355
Score = 33.0 bits (67), Expect(3) = 7e-009
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +1 / +3
Query: 265 KNKKHRWSSEEDEALKQMVKRHGTKNWRTI 354
K +K WS EEDE L + RHG W ++
Sbjct: 1101 KVRKGLWSPEEDEKLYNHIIRHGVGCWSSV 1190
Score = 31.2 bits (63), Expect(3) = 7e-009
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = +1 / +1
Query: 493 KWCKMVKHFPGRTNDALKEHW 555
+W ++ H PGRT++ +K W
Sbjct: 1486 RWSQIASHLPGRTDNEIKNFW 1548
>gb|BF626054.2|BF626054 HVSMEa0015H17f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0015H17f, mRNA sequence
Length = 710
Score = 53.7 bits (113), Expect(2) = 8e-009
Identities = 19/62 (30%), Positives = 33/62 (53%)
Frame = +1 / +3
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P + + + EE ++ +GN+W ++ K PGRT++ +K +
Sbjct: 162 RTGKSCRLRWVNYLHPDLKRGRMTPDEERLVVDLHARWGNRWSRIAKAMPGRTDNEIKNY 341
Query: 553 WK 558
W+
Sbjct: 342 WR 347
Score = 25.0 bits (49), Expect(2) = 8e-009
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = +1 / +3
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTIA 357
+K W+ +ED L V+ G + W +A
Sbjct: 57 RKGPWTEQEDMKLAWFVRLFGERRWDFLA 143
>gb|CV059811.1|CV059811 BNEL51c10 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL51c10 5' similar to myb-related
protein, 33.3K - Arabidopsis thaliana, mRNA sequence
Length = 608
Score = 59.9 bits (127), Expect = 1e-008
Identities = 23/69 (33%), Positives = 36/69 (52%)
Frame = +1 / +1
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTIACAIPGRNANSCLSRWKYLLDPAINKEPWSQQ 450
K WS EED L +V++HG + W I+ +PGR A C RW L + P + Q
Sbjct: 82 KTGSWSPEEDALLSALVRQHGARRWTVISAGVPGRTAK*CRFRWGNQLSRDVQNRPLTGQ 261
Query: 451 EELRLIRAQ 477
++ ++ A+
Sbjct: 262 KDALMLPAR 288
Score = 36.2 bits (74), Expect = 0.14
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +1 / +3
Query: 418 PAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEHW 555
P + P++ E + Q +GNK + FPGRT++ +K HW
Sbjct: 228 PGRAEPPFNGPEGRLNVAGQAPFGNKGVEFGGFFPGRTDNFVKNHW 365
>gb|BI779364.2|BI779364 EBro01_SQ003_M18_R root, 3 week, hydroponic grown, no treatment, cv
Optic, EBro01 Hordeum vulgare subsp. vulgare cDNA clone
EBro01_SQ003_M18 5', mRNA sequence
Length = 604
Score = 53.7 bits (113), Expect(2) = 1e-008
Identities = 19/62 (30%), Positives = 33/62 (53%)
Frame = +1 / +1
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P + + + EE ++ +GN+W ++ K PGRT++ +K +
Sbjct: 397 RTGKSCRLRWVNYLHPDLKRGRMTPDEERLVVDLHARWGNRWSRIAKGMPGRTDNEIKNY 576
Query: 553 WK 558
W+
Sbjct: 577 WR 582
Score = 25.9 bits (51), Expect(2) = 1e-008
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = +1 / +1
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTIA 357
+K W+ EED L V+ G + W +A
Sbjct: 133 RKGPWTGEEDMKLAWFVRVFGERRWDFLA 219
>gb|BI958189.1|BI958189 HVSMEn0013M24f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0013M24f, mRNA sequence
Length = 471
Score = 45.1 bits (94), Expect(2) = 2e-008
Identities = 17/55 (30%), Positives = 31/55 (56%)
Frame = +1 / +1
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTND 537
R SC RW L P + + ++++E+ +I+ ++ GNKW + PGRT++
Sbjct: 304 RCGKSCRLRWINYLRPDLKRGNFTEEEDELIIKLHELLGNKWSLIAGRLPGRTDN 468
Score = 32.6 bits (66), Expect(2) = 2e-008
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +1 / +1
Query: 253 SSSSKNKKHRWSSEEDEALKQMVKRHGTKNWRTI 354
+ + K W+ EED+ L +K HG WR++
Sbjct: 181 AKKAHTNKGAWTKEEDQRLVAYIKAHGEGCWRSL 282
>gb|BG369102.2|BG369102 HVSMEi0021L15f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0021L15f, mRNA sequence
Length = 877
Score = 54.6 bits (115), Expect(2) = 2e-008
Identities = 18/62 (29%), Positives = 33/62 (53%)
Frame = +1 / +3
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P + + + EE ++ +GN+W ++ + PGRT++ +K +
Sbjct: 441 RTGKSCRLRWVNYLHPGLKRGRMTPHEERLILELHARWGNRWSRIARKLPGRTDNEIKNY 620
Query: 553 WK 558
W+
Sbjct: 621 WR 626
Score = 25.0 bits (49), Expect(2) = 2e-008
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = +1 / +1
Query: 265 KNKKHRWSSEEDEALKQMVKRHGTKNWRTIA 357
+ +K W+ +ED L V+ G + W IA
Sbjct: 205 ETRKGPWTEQEDMQLVCTVRLFGERRWDFIA 297
>gb|AY008692.1| Hordeum vulgare transcription factor GAMyb (Gamyb) gene, complete cds
Length = 6228
Score = 41.6 bits (86), Expect(2) = 2e-008
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = +1 / +2
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKH 516
R SC RW L P + K ++ +EE +I+ GNKW +M H
Sbjct: 2165 RCGKSCRLRWANHLRPNLKKGAFTPEEERLIIQLHSKMGNKWARMAAH 2308
Score = 35.7 bits (73), Expect(2) = 2e-008
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +1 / +2
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTI 354
KK W+S ED L VK+HG NW +
Sbjct: 2060 KKGPWTSAEDAILVDYVKKHGEGNWNAV 2143
>gb|BF617142.2|BF617142 HVSMEc0014M02f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0014M02f, mRNA sequence
Length = 771
Score = 49.2 bits (103), Expect(2) = 3e-008
Identities = 19/61 (31%), Positives = 31/61 (50%)
Frame = +1 / +3
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P + + ++ + +IR + GNKW + PGRT++ +K +
Sbjct: 177 RCGKSCRLRWMNYLRPDLKRGNFTDD*DELIIRLHSLLGNKWSLIAGQLPGRTDNEIKNY 356
Query: 553 W 555
W
Sbjct: 357 W 359
Score = 27.7 bits (55), Expect(2) = 3e-008
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = +1 / +3
Query: 274 KHRWSSEEDEALKQMVKRHGTKNWRTI 354
K W++EED+ L ++ +G WR++
Sbjct: 75 KGAWTTEEDQRLIAYIRANGEGCWRSL 155
>gb|BF617439.1|BF617439 HVSMEc0017F20f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0017F20f, mRNA sequence
Length = 786
Score = 56.8 bits (120), Expect = 9e-008
Identities = 22/61 (36%), Positives = 33/61 (54%)
Frame = +1 / +3
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P + + +SQ+EE +I + GNKW ++ PGRT++ +K
Sbjct: 255 RCGKSCRLRWINYLRPDLKRGAFSQEEEDLIIHLHSILGNKWSQIAAQLPGRTDNEVKNF 434
Query: 553 W 555
W
Sbjct: 435 W 437
>gb|CA008589.1|CA008589 HU11H04r HU Hordeum vulgare subsp. vulgare cDNA clone HU11H04
5-PRIME, mRNA sequence
Length = 590
Score = 56.3 bits (119), Expect = 1e-007
Identities = 20/53 (37%), Positives = 31/53 (58%)
Frame = +1 / +3
Query: 397 RWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEHW 555
RW L P + K ++ +EE +I+ GNKW +M H PGRT++ +K +W
Sbjct: 18 RWANHLRPNLKKGAFTPEEERLIIQLHSKMGNKWARMAAHLPGRTDNEIKNYW 176
>gb|BQ471469.1|BQ471469 HV02I08r HV Hordeum vulgare subsp. vulgare cDNA clone HV02I08
5-PRIME, mRNA sequence
Length = 593
Score = 42.9 bits (89), Expect(2) = 1e-007
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = +1 / +3
Query: 448 QEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEHW 555
+EE ++ GNKW ++ +H PGRT++ +K +W
Sbjct: 342 EEEETVMSLHAALGNKWSRIARHLPGRTDNEVKNYW 449
Score = 36.2 bits (74), Expect = 0.092
Identities = 18/36 (50%), Positives = 21/36 (58%)
Frame = -3 / -2
Query: 557 FQCSLSASFVLPGKCLTILHHLFP*TCCARINLSSS 450
FQ L++ VLPGKC IL HL P I +SSS
Sbjct: 451 FQ*FLTSLSVLPGKCRAILDHLLPRAAWRLITVSSS 344
Score = 31.7 bits (64), Expect(2) = 1e-007
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1 / +2
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTI 354
+K WS EED+ L+ + RHG W +
Sbjct: 161 RKGLWSPEEDQKLRDYILRHGHGCWSAL 244
>emb|X99973.1|HVMYB4TRF H.vulgare mRNA for myb4 transcription factor
Length = 1180
Score = 55.5 bits (117), Expect = 2e-007
Identities = 22/61 (36%), Positives = 33/61 (54%)
Frame = +1 / +3
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P I + +S +EE +I+ Q+ GN+W + PGRT++ +K
Sbjct: 138 RCGKSCRLRWINYLRPDIKRGNFSDEEEQSIIQLHQLLGNRWSAIAARLPGRTDNEIKNV 317
Query: 553 W 555
W
Sbjct: 318 W 320
Score = 30.3 bits (61), Expect = 8.1
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = +1 / +3
Query: 343 WRTIACAIPGRNANSCLSRWKYLLDPAINKEPWSQQEE 456
W IA +PGR N + W L ++ QQEE
Sbjct: 261 WSAIAARLPGRTDNEIKNVWHTHLKKRLDPSAQEQQEE 374
>gb|CV063055.1|CV063055 BNEL86b3 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL86b3 5' similar to
OSJNBb0039L24.8, mRNA sequence
Length = 715
Score = 44.2 bits (92), Expect(2) = 3e-007
Identities = 19/61 (31%), Positives = 30/61 (49%)
Frame = +1 / +1
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
RN SC RW L + +S +EE + GNKW + ++ P RT++ +K +
Sbjct: 244 RNGKSCRLRWINYLRAGLKHGMFSPEEEETEMSLHAALGNKWSWIERNMPLRTDNDVKNY 423
Query: 553 W 555
W
Sbjct: 424 W 426
Score = 33.5 bits (68), Expect = 0.62
Identities = 24/69 (34%), Positives = 31/69 (44%)
Frame = -3 / -3
Query: 557 FQCSLSASFVLPGKCLTILHHLFP*TCCARINLSSSCCDQGSLFIAGSRRYFHLERHELA 378
FQ L++ VL G +I HLFP C I++SSS + F R H L
Sbjct: 428 FQ*FLTSLSVLNGIFRSIHDHLFPRAACRLISVSSSSGENIPCFSPARR*LIHRSLQLLP 249
Query: 377 FRPGIAHAI 351
FR A A+
Sbjct: 248 FRWSPALAV 222
Score = 29.0 bits (58), Expect(2) = 3e-007
Identities = 11/35 (31%), Positives = 16/35 (45%)
Frame = +1 / +1
Query: 250 ESSSSKNKKHRWSSEEDEALKQMVKRHGTKNWRTI 354
E +K WS ED+ L+ + RHG W +
Sbjct: 118 EKPKPSYRKGLWSPVEDQKLRDYILRHGHGCWSAL 222
>gb|CA019195.1|CA019195 HV11C18r HV Hordeum vulgare subsp. vulgare cDNA clone HV11C18
5-PRIME, mRNA sequence
Length = 583
Score = 53.2 bits (112), Expect = 1e-006
Identities = 20/61 (32%), Positives = 33/61 (54%)
Frame = +1 / +2
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P + + +S +E+ +I+ + GNKW + PGRT++ +K +
Sbjct: 35 RCGKSCRLRWINYLRPDLKRGNFSHEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNY 214
Query: 553 W 555
W
Sbjct: 215 W 217
>gb|BF064941.1|BF064941 HV_CEb0022A15f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0022A15f, mRNA sequence
Length = 838
Score = 36.2 bits (74), Expect(2) = 3e-006
Identities = 14/59 (23%), Positives = 27/59 (45%)
Frame = +1 / +1
Query: 379 ANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEHW 555
A + SR P + + E+ +++ + NKW + PGRT++ +K +W
Sbjct: 328 ARAAASRGSTTSAPTSRRVNLRRDEDELIVKLHSLLRNKWSLIAARLPGRTDNEIKNYW 504
Score = 33.5 bits (68), Expect(2) = 3e-006
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +1 / +3
Query: 274 KHRWSSEEDEALKQMVKRHGTKNWRTIACA 363
K W++EEDE L V+ HG WR++ A
Sbjct: 219 KGAWTTEEDERLVAHVRAHGEGCWRSLPSA 308
>gb|BI954784.1|BI954784 HVSMEm0019M04f Hordeum vulgare green seedling EST library
HVcDNA0014 (Blumeria infected) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEm0019M04f, mRNA sequence
Length = 672
Score = 51.4 bits (108), Expect = 4e-006
Identities = 17/62 (27%), Positives = 33/62 (53%)
Frame = +1 / +2
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P + + + EE ++ +G++W ++ + PGRT++ +K +
Sbjct: 254 RTGKSCRLRWVNYLHPGLKRGRITADEERLILTLHAEWGSRWSRIARKLPGRTDNEIKNY 433
Query: 553 WK 558
W+
Sbjct: 434 WR 439
>gb|AV932650.1|AV932650 AV932650 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal1i09 5', mRNA sequence
Length = 619
Score = 51.4 bits (108), Expect = 4e-006
Identities = 17/62 (27%), Positives = 33/62 (53%)
Frame = +1 / +1
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P + + + EE ++ +G++W ++ + PGRT++ +K +
Sbjct: 421 RTGKSCRLRWVNYLHPGLKRGRITADEERLILTLHAEWGSRWSRIARKLPGRTDNEIKNY 600
Query: 553 WK 558
W+
Sbjct: 601 WR 606
>gb|AV933832.1|AV933832 AV933832 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal9l05 5', mRNA sequence
Length = 665
Score = 51.4 bits (108), Expect = 4e-006
Identities = 17/62 (27%), Positives = 33/62 (53%)
Frame = +1 / +2
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P + + + EE ++ +G++W ++ + PGRT++ +K +
Sbjct: 437 RTGKSCRLRWVNYLHPGLKRGRITADEERLILTLHAEWGSRWSRIARKLPGRTDNEIKNY 616
Query: 553 WK 558
W+
Sbjct: 617 WR 622
>gb|BQ765682.1|BQ765682 EBro03_SQ007_I24_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ007_I24 5', mRNA sequence
Length = 623
Score = 51.4 bits (108), Expect = 4e-006
Identities = 17/62 (27%), Positives = 33/62 (53%)
Frame = +1 / +2
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P + + + EE ++ +G++W ++ + PGRT++ +K +
Sbjct: 116 RTGKSCRLRWVNYLHPGLKRGRITADEERLILTLHAEWGSRWSRIARKLPGRTDNEIKNY 295
Query: 553 WK 558
W+
Sbjct: 296 WR 301
>gb|CA003603.1|CA003603 HS14P22r HS Hordeum vulgare subsp. vulgare cDNA clone HS14P22
5-PRIME, mRNA sequence
Length = 405
Score = 37.1 bits (76), Expect(2) = 5e-006
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +1 / +1
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKM 507
RN SC RW L P + +S +EE ++ GNKW ++
Sbjct: 271 RNGKSCRLRWINYLRPGLKHGMFSAEEEETVMSLHAALGNKWSRI 405
Score = 31.7 bits (64), Expect(2) = 5e-006
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1 / +1
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTI 354
+K WS EED+ L+ + RHG W +
Sbjct: 166 RKGLWSPEEDQKLRDYILRHGHGCWSAL 249
>gb|BG415768.1|BG415768 HVSMEk0007M02f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0007M02f, mRNA sequence
Length = 670
Score = 50.5 bits (106), Expect = 7e-006
Identities = 14/39 (35%), Positives = 28/39 (71%)
Frame = +1 / +3
Query: 439 WSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEHW 555
W++ +++ LI A +++GN+W + + PGR+ +A+K HW
Sbjct: 72 WTEADDILLIDAHKIHGNRWSSIARCLPGRSENAVKNHW 188
>emb|X70879.1|HVMYB1G H.vulgare Myb1 gene
Length = 2587
Score = 32.6 bits (66), Expect(3) = 1e-005
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +1 / +3
Query: 274 KHRWSSEEDEALKQMVKRHGTKNWRTI 354
K W+ EED+ L +K HG WR++
Sbjct: 1041 KGAWTKEEDDRLTAYIKAHGEGCWRSL 1121
Score = 30.3 bits (61), Expect(3) = 1e-005
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +1 / +3
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNK 495
R SC RW L P + + +S +E+ +I+ + GNK
Sbjct: 1143 RCGKSCRLRWINYLRPDLKRGNFSHEEDELIIKLHSLLGNK 1265
Score = 26.8 bits (53), Expect(3) = 1e-005
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = +1 / +2
Query: 493 KWCKMVKHFPGRTNDALKEHW 555
+W + PGRT++ +K +W
Sbjct: 1409 RWSLIAGRLPGRTDNEIKNYW 1471
>gb|BG343954.1|BG343954 HVSMEg0007D14f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0007D14f, mRNA sequence
Length = 863
Score = 35.7 bits (73), Expect(2) = 7e-005
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +1 / +3
Query: 250 ESSSSKNKKHRWSSEEDEALKQMVKRHGTKNWRTI 354
++ + KK W+ EED L +++HG NWR++
Sbjct: 147 DNGGASVKKGPWTPEEDIILVSYIQQHGPGNWRSV 251
Score = 29.4 bits (59), Expect(2) = 7e-005
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +1 / +3
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKM 507
R + SC R L P + + +Q EE +IR Q + GN+ ++
Sbjct: 273 RCSKSCRLRGTNYLRPGVKRGNLAQHEEGMMIRLQALLGNRGARV 407
>gb|BE455245.2|BE455245 HVSMEh0096L16f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0096L16f, mRNA sequence
Length = 716
Score = 33.5 bits (68), Expect(2) = 3e-004
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +1 / +2
Query: 274 KHRWSSEEDEALKQMVKRHGTKNWRTI 354
K W+S ED L VK+HG NW +
Sbjct: 380 KGPWTSAEDAILVDYVKKHGEGNWNAV 460
Score = 29.4 bits (59), Expect(2) = 3e-004
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +1 / +1
Query: 463 LIRAQQVYGNKWCKMVKHFPGRTNDALKE 549
L + Q GN W M H P RT++ KE
Sbjct: 574 LSQLQSQMGNWWAPMAAHLPWRTDNGNKE 660
>gb|BI956816.1|BI956816 HVSMEn0005H11f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0005H11f, mRNA sequence
Length = 917
Score = 28.1 bits (56), Expect(3) = 3e-004
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +1 / +3
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTI 354
KK W++EED L + HG WR +
Sbjct: 144 KKGPWTAEEDXKLVAFLLSHGHCCWRLV 227
Score = 25.4 bits (50), Expect(3) = 3e-004
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +1 / +1
Query: 502 KMVKHFPGRTNDALKEHW 555
K+ PGRT+ +K HW
Sbjct: 472 KIAARLPGRTDT*IKNHW 525
Score = 25.4 bits (50), Expect(3) = 3e-004
Identities = 13/41 (31%), Positives = 17/41 (41%)
Frame = +1 / +3
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNK 495
R SC RW L P + + S EE +I GN+
Sbjct: 249 RCGKSCRLRWTNYLRPDLKRGLLSDDEERLVIDLHSQLGNR 371
>gb|BG368576.2|BG368576 HVSMEi0019M02f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0019M02f, mRNA sequence
Length = 621
Score = 44.2 bits (92), Expect = 5e-004
Identities = 16/58 (27%), Positives = 29/58 (50%)
Frame = +1 / +1
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALK 546
R SC RW L P + + + EE ++ +GN+W ++ + P RT++ +K
Sbjct: 442 RTGKSCRLRWVNYLHPGLKRGRMTPHEERLILELHARWGNRWSRIARKLPRRTDNEIK 615
>gb|BF618630.2|BF618630 HVSMEc0006O07f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0006O07f, mRNA sequence
Length = 556
Score = 30.3 bits (61), Expect(3) = 6e-004
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = +1 / +3
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNK 495
R SC RW L P + + +SQ+EE +I + NK
Sbjct: 258 RCGKSCRLRWINYLRPDLKRGAFSQEEEDLIIHLHSILRNK 380
Score = 25.4 bits (50), Expect(3) = 6e-004
Identities = 9/28 (32%), Positives = 15/28 (53%)
Frame = +1 / +3
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTI 354
K+ WS EED L + ++G W ++
Sbjct: 153 KRGLWSPEED*KLMNHIAKYGNGCWSSV 236
Score = 22.3 bits (43), Expect(3) = 6e-004
Identities = 6/18 (33%), Positives = 12/18 (66%)
Frame = +1 / +1
Query: 493 KWCKMVKHFPGRTNDALK 546
+W ++ PGRT++ +K
Sbjct: 379 RWSQIAAQLPGRTDNEVK 432
>gb|AV920069.1|AV920069 AV920069 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags9c13 3', mRNA sequence
Length = 710
Score = 41.1 bits (85), Expect(2) = 9e-004
Identities = 15/48 (31%), Positives = 27/48 (56%)
Frame = +1 / -2
Query: 412 LDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEHW 555
L P I + ++ +EE +I+ + GN+W + PGRT++ +K W
Sbjct: 604 LRPDIKRGNFTSEEEGAIIQLHAMLGNRWSTIAARLPGRTDNEIKNVW 461
Score = 21.8 bits (42), Expect(2) = 9e-004
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = +1 / -1
Query: 322 KRHGTKNWRTI 354
K+HG NWR +
Sbjct: 698 KQHGHSNWRAL 666
>gb|BE602473.2|BE602473 HVSMEh0099B10f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0099B10f, mRNA sequence
Length = 734
Score = 42.9 bits (89), Expect = 0.001
Identities = 15/27 (55%), Positives = 21/27 (77%)
Frame = +1 / +1
Query: 274 KHRWSSEEDEALKQMVKRHGTKNWRTI 354
K +W+SEE+EAL++ V +HG WRTI
Sbjct: 100 KQKWTSEEEEALRRGVLKHGAGKWRTI 180
>gb|BG369593.2|BG369593 HVSMEi0025C01f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0025C01f, mRNA sequence
Length = 691
Score = 42.9 bits (89), Expect = 0.001
Identities = 15/27 (55%), Positives = 21/27 (77%)
Frame = +1 / +3
Query: 274 KHRWSSEEDEALKQMVKRHGTKNWRTI 354
K +W+SEE+EAL++ V +HG WRTI
Sbjct: 99 KQKWTSEEEEALRRGVLKHGAGKWRTI 179
>gb|BM099949.2|BM099949 EBes01_SQ004_L19_R embryo sac, 4-6 DPA, no treatment, cv Optic,
EBes01 Hordeum vulgare subsp. vulgare cDNA clone
EBes01_SQ004_L19 5', mRNA sequence
Length = 406
Score = 42.9 bits (89), Expect = 0.001
Identities = 15/27 (55%), Positives = 21/27 (77%)
Frame = +1 / +3
Query: 274 KHRWSSEEDEALKQMVKRHGTKNWRTI 354
K +W+SEE+EAL++ V +HG WRTI
Sbjct: 27 KQKWTSEEEEALRRGVLKHGAGKWRTI 107
>gb|BQ768242.1|BQ768242 EBro08_SQ011_L02_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ011_L02 5', mRNA sequence
Length = 444
Score = 42.9 bits (89), Expect = 0.001
Identities = 15/27 (55%), Positives = 21/27 (77%)
Frame = +1 / +2
Query: 274 KHRWSSEEDEALKQMVKRHGTKNWRTI 354
K +W+SEE+EAL++ V +HG WRTI
Sbjct: 65 KQKWTSEEEEALRRGVLKHGAGKWRTI 145
>gb|BU997102.1|BU997102 HI06O17r HI Hordeum vulgare subsp. vulgare cDNA clone HI06O17
5-PRIME, mRNA sequence
Length = 439
Score = 42.9 bits (89), Expect = 0.001
Identities = 15/27 (55%), Positives = 21/27 (77%)
Frame = +1 / +2
Query: 274 KHRWSSEEDEALKQMVKRHGTKNWRTI 354
K +W+SEE+EAL++ V +HG WRTI
Sbjct: 38 KQKWTSEEEEALRRGVLKHGAGKWRTI 118
>gb|BU997979.1|BU997979 HI09J14r HI Hordeum vulgare subsp. vulgare cDNA clone HI09J14
5-PRIME, mRNA sequence
Length = 483
Score = 42.9 bits (89), Expect = 0.001
Identities = 15/27 (55%), Positives = 21/27 (77%)
Frame = +1 / +3
Query: 274 KHRWSSEEDEALKQMVKRHGTKNWRTI 354
K +W+SEE+EAL++ V +HG WRTI
Sbjct: 51 KQKWTSEEEEALRRGVLKHGAGKWRTI 131
>gb|BU998579.1|BU998579 HI11I02r HI Hordeum vulgare subsp. vulgare cDNA clone HI11I02
5-PRIME, mRNA sequence
Length = 626
Score = 42.9 bits (89), Expect = 0.001
Identities = 15/27 (55%), Positives = 21/27 (77%)
Frame = +1 / +1
Query: 274 KHRWSSEEDEALKQMVKRHGTKNWRTI 354
K +W+SEE+EAL++ V +HG WRTI
Sbjct: 94 KQKWTSEEEEALRRGVLKHGAGKWRTI 174
>gb|AJ463005.1|AJ463005 AJ463005 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200066D04F1, mRNA sequence
Length = 420
Score = 42.4 bits (88), Expect = 0.002
Identities = 16/35 (45%), Positives = 24/35 (68%)
Frame = +1 / +1
Query: 250 ESSSSKNKKHRWSSEEDEALKQMVKRHGTKNWRTI 354
E+ S + + RWSS E+EALK V++ G+ NW+ I
Sbjct: 178 ENKSMRRRARRWSSVEEEALKDGVEQFGSGNWKDI 282
>gb|BG300766.1|BG300766 HVSMEb0018F03f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0018F03f, mRNA sequence
Length = 607
Score = 42.0 bits (87), Expect = 0.003
Identities = 16/27 (59%), Positives = 19/27 (70%)
Frame = +1 / +3
Query: 274 KHRWSSEEDEALKQMVKRHGTKNWRTI 354
K RW+SEE+ ALK V +HG WRTI
Sbjct: 288 KQRWTSEEEAALKAGVAKHGPGKWRTI 368
Score = 31.7 bits (64), Expect = 2.2
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = -3 / -1
Query: 365 IAHAIVRQFFVPCLFTICFSASSSSDDH 282
++ +VR F PCL T SA+SSSD H
Sbjct: 379 VSRRMVRHFPGPCLATPALSAASSSDVH 296
>gb|BF065151.1|BF065151 HV_CEb0023I16f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0023I16f, mRNA sequence
Length = 577
Score = 42.0 bits (87), Expect = 0.003
Identities = 16/27 (59%), Positives = 19/27 (70%)
Frame = +1 / +3
Query: 274 KHRWSSEEDEALKQMVKRHGTKNWRTI 354
K RW+SEE+ ALK V +HG WRTI
Sbjct: 270 KQRWTSEEEAALKAGVAKHGPGKWRTI 350
Score = 31.7 bits (64), Expect = 2.2
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = -3 / -1
Query: 365 IAHAIVRQFFVPCLFTICFSASSSSDDH 282
++ +VR F PCL T SA+SSSD H
Sbjct: 361 VSRRMVRHFPGPCLATPALSAASSSDVH 278
>gb|BG368560.2|BG368560 HVSMEi0019L19f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0019L19f, mRNA sequence
Length = 619
Score = 42.0 bits (87), Expect = 0.003
Identities = 16/27 (59%), Positives = 19/27 (70%)
Frame = +1 / +1
Query: 274 KHRWSSEEDEALKQMVKRHGTKNWRTI 354
K RW+SEE+ ALK V +HG WRTI
Sbjct: 271 KQRWTSEEEAALKAGVAKHGPGKWRTI 351
Score = 31.7 bits (64), Expect = 2.2
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = -3 / -3
Query: 365 IAHAIVRQFFVPCLFTICFSASSSSDDH 282
++ +VR F PCL T SA+SSSD H
Sbjct: 362 VSRRMVRHFPGPCLATPALSAASSSDVH 279
>gb|BM816006.1|BM816006 HC109C12_T3.ab1 HC Hordeum vulgare subsp. vulgare cDNA clone
HC109C12_T3.ab1 similar to putative DNA-binding protein;
27830-29933 [Arabidopsis thaliana], Contains similarity
to DNA-binding protein MYB1 from Petroselinum crispum
gi|7488946 and contains MYB-DNA-binding PF|00249 and
linker-Histone PF|00538 domains. [Arabidopsis thaliana],
mRNA sequence
Length = 914
Score = 42.0 bits (87), Expect = 0.003
Identities = 16/27 (59%), Positives = 19/27 (70%)
Frame = +1 / +2
Query: 274 KHRWSSEEDEALKQMVKRHGTKNWRTI 354
K RW+SEE+ ALK V +HG WRTI
Sbjct: 185 KQRWTSEEEAALKAGVAKHGPGKWRTI 265
Score = 31.7 bits (64), Expect = 2.2
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = -3 / -3
Query: 365 IAHAIVRQFFVPCLFTICFSASSSSDDH 282
++ +VR F PCL T SA+SSSD H
Sbjct: 276 VSRRMVRHFPGPCLATPALSAASSSDVH 193
>gb|BI950149.1|BI950149 HVSMEl0019A16f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0019A16f, mRNA sequence
Length = 569
Score = 41.6 bits (86), Expect = 0.003
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +1 / +1
Query: 307 LKQMVKRHGTKNWRTIACAIPGRNANSCLSRWKYLLDPAI 426
LK++V +HG W TI+ +PGR C RW + P I
Sbjct: 94 LKRLVDQHGEHKWATISDHLPGRIGKHCRERWTNHVRPGI 213
>gb|BF262206.3|BF262206 HV_CEa0003J19f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0003J19f, mRNA sequence
Length = 626
Score = 41.6 bits (86), Expect = 0.003
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +1 / +3
Query: 364 IPGRNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKM 507
+PGR + C RW+ +LDP I+ W +E+ + + G W K+
Sbjct: 9 VPGRTQSQCGERWRNVLDPDIDHGEWRPEEDSNPLASVHEVGPCWSKI 152
Score = 31.7 bits (64), Expect = 3.2
Identities = 16/43 (37%), Positives = 18/43 (41%)
Frame = +1 / +3
Query: 283 WSSEEDEALKQMVKRHGTKNWRTIACAIPGRNANSCLSRWKYL 411
W EED V G + IP R N+CL RWK L
Sbjct: 84 WRPEEDSNPLASVHEVGPCWSKIAGAMIPHRTDNNCLRRWKKL 212
>gb|BG416961.1|BG416961 HVSMEk0015G09f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0015G09f, mRNA sequence
Length = 489
Score = 40.2 bits (83), Expect = 0.009
Identities = 11/23 (47%), Positives = 18/23 (78%)
Frame = +1 / +2
Query: 487 GNKWCKMVKHFPGRTNDALKEHW 555
GNKW ++ +H PGRT++ +K +W
Sbjct: 23 GNKWSRIARHLPGRTDNEVKNYW 91
Score = 32.6 bits (66), Expect = 1.2
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -3 / -1
Query: 557 FQCSLSASFVLPGKCLTILHHLFP 486
FQ L++ VLPGKC IL HL P
Sbjct: 93 FQ*FLTSLSVLPGKCRAILDHLLP 22
>emb|X70880.1|HVMYB2G H.vulgare Myb2 gene
Length = 1093
Score = 30.3 bits (61), Expect(2) = 0.011
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +1 / +1
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNK 495
R SC RW L P + + ++ E+ +IR + GNK
Sbjct: 787 RCGKSCRLRWMNYLRPDLKRGNFTDDEDELIIRLHSLLGNK 909
Score = 27.2 bits (54), Expect(2) = 0.011
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = +1 / +1
Query: 274 KHRWSSEEDEALKQMVKRHGTKNWRTI 354
K W+ EED+ L ++ +G WR++
Sbjct: 685 KGAWTKEEDQRLIAYIRANGEGCWRSL 765
>gb|BF262578.2|BF262578 HV_CEa0004G02f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0004G02f, mRNA sequence
Length = 869
Score = 39.3 bits (81), Expect = 0.016
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +1 / +2
Query: 400 WKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEHW 555
W L P I +++QE++ + G++W + PGRT++ +K +W
Sbjct: 2 WLTYLRPDIKHGGYTEQEDMVICSLYNSIGSRWSIIASKLPGRTDNDVKNYW 157
>gb|BF619532.3|BF619532 HVSMEc0003P10f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0003P10f, mRNA sequence
Length = 859
Score = 29.4 bits (59), Expect(2) = 0.020
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +1 / +3
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQV 483
R SC RW L P I + +S +EE +IR Q+
Sbjct: 264 RCGKSCRIRWINYLRPDIKRGNFSNKEEQSIIRLHQL 374
Score = 27.2 bits (54), Expect(2) = 0.020
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +1 / +3
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTI 354
K+ + EED+ L + + HG NWR +
Sbjct: 159 KRGPCTPEEDKILVEHIHIHGHSNWRAL 242
>gb|AL506267.1|AL506267 AL506267 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY02J05T 5',
mRNA sequence
Length = 554
Score = 38.9 bits (80), Expect = 0.022
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +1 / +2
Query: 274 KHRWSSEEDEALKQMVKRHGTKNWRTI 354
K +W++EE+ ALK + +HG WRTI
Sbjct: 299 KQKWTAEEEAALKAGIGKHGAGKWRTI 379
>gb|BF618024.2|BF618024 HVSMEc0003C24f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0003C24f, mRNA sequence
Length = 756
Score = 38.9 bits (80), Expect = 0.022
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +1 / +3
Query: 274 KHRWSSEEDEALKQMVKRHGTKNWRTI 354
K +W++EE+ ALK + +HG WRTI
Sbjct: 126 KQKWTAEEEAALKAGIGKHGAGKWRTI 206
>gb|BM816004.1|BM816004 HB105F12_SK.ab1 HB Hordeum vulgare subsp. vulgare cDNA clone
HB105F12_SK.ab1 similar to DNA-binding protein MYB1 from
Petroselinum crispum and contains MYB-DNA-binding
PF|00249 and linker-Histone PF|00538 domains
[Arabidopsis thaliana],DNA-binding protein MYB1
[Petroselinum crispum],MYB-like protein [Arabidopsis
thaliana], mRNA sequence
Length = 855
Score = 38.9 bits (80), Expect = 0.022
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +1 / +2
Query: 274 KHRWSSEEDEALKQMVKRHGTKNWRTI 354
K +W++EE+ ALK + +HG WRTI
Sbjct: 284 KQKWTAEEEAALKAGIGKHGAGKWRTI 364
>gb|BQ470914.1|BQ470914 HX04G18r HX Hordeum vulgare subsp. vulgare cDNA clone HX04G18
5-PRIME, mRNA sequence
Length = 462
Score = 38.9 bits (80), Expect = 0.022
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +1 / +1
Query: 274 KHRWSSEEDEALKQMVKRHGTKNWRTI 354
K +W++EE+ ALK + +HG WRTI
Sbjct: 244 KQKWTAEEEAALKAGIGKHGAGKWRTI 324
>gb|BF629773.1|BF629773 HVSMEb0013M11f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0013M11f, mRNA sequence
Length = 827
Score = 38.0 bits (78), Expect = 0.041
Identities = 15/53 (28%), Positives = 27/53 (50%)
Frame = +1 / +1
Query: 397 RWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEHW 555
RW L P I +++QE+ + G++W + PGRT++ +K +W
Sbjct: 1 RWLNYLRPDIRHGGYTEQEDRVICSLYASIGSRWSIIGSKLPGRTDNDVKNYW 159
>gb|BJ471839.1|BJ471839 BJ471839 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal21p18 5', mRNA sequence
Length = 566
Score = 31.7 bits (64), Expect(2) = 0.044
Identities = 12/45 (26%), Positives = 21/45 (46%)
Frame = +1 / +1
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKM 507
R SC RW L P + + + EE ++ +GN+W ++
Sbjct: 430 RTGKSCRLRWVNYLHPDLKRGRMTPDEERLVVDLHARWGNRWSRI 564
Score = 25.0 bits (49), Expect(2) = 0.044
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = +1 / +1
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTIA 357
+K W+ +ED L V+ G + W +A
Sbjct: 166 RKGPWTEQEDMKLAWFVRLFGERRWDFLA 252
>gb|AL506268.1|AL506268 AL506268 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY02J06T 5',
mRNA sequence
Length = 504
Score = 37.1 bits (76), Expect = 0.076
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +1 / +2
Query: 274 KHRWSSEEDEALKQMVKRHGTKNWRTI 354
K +W++EE+ LK + +HG WRTI
Sbjct: 299 KQKWTAEEEAXLKAGIGKHGAGKWRTI 379
>gb|BI957930.1|BI957930 HVSMEn0012D18f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0012D18f, mRNA sequence
Length = 869
Score = 36.6 bits (75), Expect = 0.10
Identities = 14/54 (25%), Positives = 25/54 (46%)
Frame = +1 / +1
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTN 534
R SC RW L P + + + EE ++ +G +W ++ + PGR +
Sbjct: 421 RTGKSCRLRWGNYLHPGLKRGRITADEERLILTLHAEWGCRWSRIPRKLPGRAD 582
>gb|BU998473.1|BU998473 HI11C20r HI Hordeum vulgare subsp. vulgare cDNA clone HI11C20
5-PRIME, mRNA sequence
Length = 638
Score = 36.2 bits (74), Expect = 0.14
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +1 / +2
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTI 354
+K +W+S E+ AL+ + +HG +WR I
Sbjct: 116 RKQKWTSREEAALRAGIAKHGVGSWRVI 199
>gb|CB883093.1|CB883093 HQ01C22w HQ Hordeum vulgare subsp. vulgare cDNA clone HQ01C22
3-PRIME, mRNA sequence
Length = 646
Score = 35.3 bits (72), Expect = 0.27
Identities = 11/41 (26%), Positives = 23/41 (56%)
Frame = +1 / +2
Query: 430 KEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
+E W++ E R + A ++YG W ++ +H +T ++ H
Sbjct: 488 RERWTEAEHKRFLEALKLYGRAWQRIEEHVGNKTAVQIRSH 610
>gb|CK123590.1|CK123590 BES1824104i24 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010I244 5-PRIME, mRNA sequence
Length = 284
Score = 26.3 bits (52), Expect(2) = 0.27
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = +1 / +2
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVY 486
R SC RW L P I + S EE ++R +++
Sbjct: 167 RCGKSCRLRWLNYLRPGIKRGNISXDEEELIVRLHRLF 280
Score = 25.4 bits (50), Expect(2) = 0.27
Identities = 7/24 (29%), Positives = 13/24 (54%)
Frame = +1 / +2
Query: 283 WSSEEDEALKQMVKRHGTKNWRTI 354
W++ ED+ L + HG W ++
Sbjct: 74 WTAMEDDILVSYINEHGEGKWGSL 145
>gb|BI960298.1|BI960298 HVSMEn0024C09f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0024C09f, mRNA sequence
Length = 658
Score = 34.8 bits (71), Expect = 0.36
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +1 / +2
Query: 487 GNKWCKMVKHFPGRTNDALKEHW 555
GN+W + H PGRT++ +K W
Sbjct: 2 GNRWSQSAGHLPGRTDNEIKNFW 70
>gb|BM442518.2|BM442518 EBan01_SQ003_G12_R anther, yellow stage, no treatment, cv Optic,
EBan01 Hordeum vulgare subsp. vulgare cDNA clone
EBan01_SQ003_G12 5', mRNA sequence
Length = 137
Score = 34.8 bits (71), Expect = 0.36
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1 / +3
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTI 354
KK W+ ED+ L V+RHG NW +
Sbjct: 15 KKGPWTQAEDKVLLDHVRRHGEGNWNAV 98
>gb|BJ471705.1|BJ471705 BJ471705 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal21d01 5', mRNA sequence
Length = 633
Score = 34.4 bits (70), Expect = 0.49
Identities = 11/41 (26%), Positives = 23/41 (56%)
Frame = +1 / +1
Query: 430 KEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
+E W++ E R + A ++YG W ++ +H +T ++ H
Sbjct: 478 RERWTEAEHKRFLEALKLYGRAWQRIEEHVGTKTAVQIRSH 600
>gb|BJ471978.1|BJ471978 BJ471978 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal28o17 5', mRNA sequence
Length = 578
Score = 34.4 bits (70), Expect = 0.49
Identities = 11/41 (26%), Positives = 23/41 (56%)
Frame = +1 / +2
Query: 430 KEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
+E W++ E R + A ++YG W ++ +H +T ++ H
Sbjct: 371 RERWTEAEHKRFLEALKLYGRAWQRIEEHVGTKTAVQIRSH 493
>gb|BJ469995.1|BJ469995 BJ469995 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal14l14 5', mRNA sequence
Length = 391
Score = 33.9 bits (69), Expect = 0.67
Identities = 10/41 (24%), Positives = 23/41 (56%)
Frame = +1 / +3
Query: 430 KEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
+E W+ +E + + A ++YG W ++ +H +T ++ H
Sbjct: 111 REKWTDEEHEKFLEALKLYGRSWRQIQEHIGTKTAVQIRSH 233
>gb|BJ472642.1|BJ472642 BJ472642 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal35n16 5', mRNA sequence
Length = 591
Score = 33.9 bits (69), Expect = 0.67
Identities = 10/41 (24%), Positives = 23/41 (56%)
Frame = +1 / +3
Query: 430 KEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
+E W+ +E + + A ++YG W ++ +H +T ++ H
Sbjct: 111 REKWTDEEHEKFLEALKLYGRSWRQIQEHIGTKTAVQIRSH 233
>gb|BJ470047.1|BJ470047 BJ470047 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal15a05 5', mRNA sequence
Length = 391
Score = 31.2 bits (63), Expect(2) = 0.68
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = +1 / +2
Query: 439 WSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEHW 555
+++ EE + R ++ GN+W + PGRT + ++ W
Sbjct: 173 FTEAEEDLVFRMHRLVGNRWELIAGRIPGRTAEEVEMFW 289
Score = 19.6 bits (37), Expect(2) = 0.68
Identities = 7/22 (31%), Positives = 12/22 (54%)
Frame = +1 / +2
Query: 85 QRRANSSTKHSSKSDEVAEDML 150
++ NS+ KH E ED++
Sbjct: 134 RKEVNSNAKHFVDFTEAEEDLV 199
>gb|BJ454672.1|BJ454672 BJ454672 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak14f07 3', mRNA sequence
Length = 419
Score = 31.2 bits (63), Expect(2) = 0.74
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = +1 / -2
Query: 439 WSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEHW 555
+++ EE + R ++ GN+W + PGRT + ++ W
Sbjct: 310 FTEAEEDLVFRMHRLVGNRWELIAGRIPGRTAEEVEMFW 194
Score = 19.6 bits (37), Expect(2) = 0.74
Identities = 7/22 (31%), Positives = 12/22 (54%)
Frame = +1 / -2
Query: 85 QRRANSSTKHSSKSDEVAEDML 150
++ NS+ KH E ED++
Sbjct: 349 RKEVNSNAKHFVDFTEAEEDLV 284
>gb|AV922837.1|AV922837 AV922837 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd2j01 5', mRNA sequence
Length = 425
Score = 31.2 bits (63), Expect(2) = 0.75
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = +1 / +1
Query: 439 WSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEHW 555
+++ EE + R ++ GN+W + PGRT + ++ W
Sbjct: 175 FTEAEEDLVFRMHRLVGNRWELIAGRIPGRTAEEVEMFW 291
Score = 19.6 bits (37), Expect(2) = 0.75
Identities = 7/22 (31%), Positives = 12/22 (54%)
Frame = +1 / +1
Query: 85 QRRANSSTKHSSKSDEVAEDML 150
++ NS+ KH E ED++
Sbjct: 136 RKEVNSNAKHFVDFTEAEEDLV 201
>gb|BM443593.2|BM443593 EBro02_SQ005_M21_R root, 3 week, hydroponic grown, low nitrogen, cv
Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone
EBro02_SQ005_M21 5', mRNA sequence
Length = 378
Score = 33.5 bits (68), Expect = 0.92
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = +1 / +2
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCK 504
R SC RW L P + + + +E+L ++ GN+W K
Sbjct: 245 RTGKSCRLRWLNYLRPDLRRGGMAAEEQLLILELHARRGNRWSK 376
>gb|AL505601.1|AL505601 AL505601 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW08P12V 5', mRNA sequence
Length = 674
Score = 33.0 bits (67), Expect = 1.3
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = +1 / +2
Query: 139 EDMLQSNIPHETVGLCQGVESEEIEGPPHKKIVQNFTESSSSKNKKHRW 285
+D S++PH G C G E PP + V+N+ S + KH W
Sbjct: 413 QDEQLSSMPHARNGSCTGWGCCERTIPPEENPVKNYILSFDRVSYKHNW 559
>gb|AV909344.1|AV909344 AV909344 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak12h22 5', mRNA sequence
Length = 506
Score = 33.0 bits (67), Expect = 1.3
Identities = 15/62 (24%), Positives = 31/62 (50%)
Frame = +1 / +2
Query: 370 GRNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKE 549
G+N+ R + + A + +++ EE + R ++ GN+W + PGRT + ++
Sbjct: 101 GKNSKIMSGRERKVNSNAKHFVDFTEAEEDLVFRMHRLVGNRWELIAGRIPGRTAEEVEM 280
Query: 550 HW 555
W
Sbjct: 281 FW 286
>gb|AV911235.1|AV911235 AV911235 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak12h22 3', mRNA sequence
Length = 491
Score = 33.0 bits (67), Expect = 1.3
Identities = 15/62 (24%), Positives = 31/62 (50%)
Frame = +1 / -2
Query: 370 GRNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKE 549
G+N+ R + + A + +++ EE + R ++ GN+W + PGRT + ++
Sbjct: 388 GKNSKIMSGRERKVNSNAKHFVDFTEAEEDLVFRMHRLVGNRWELIAGRIPGRTAEEVEM 209
Query: 550 HW 555
W
Sbjct: 208 FW 203
>gb|BE411069.1|BE411069 ISC002.A07F990325 ITEC ISC Barley Leaf Library Hordeum vulgare
subsp. vulgare cDNA clone ISC002.A07, mRNA sequence
Length = 395
Score = 29.0 bits (58), Expect(2) = 1.4
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -3 / -3
Query: 221 GGPSISSDSTPWHSPTVSC 165
GGP +S PW SP+ SC
Sbjct: 174 GGPRRASPPAPWSSPSSSC 118
Score = 20.0 bits (38), Expect(2) = 1.4
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = -3 / -2
Query: 407 YFHLERHELAFRPGIAHAIVR 345
Y H++ L + GIA A R
Sbjct: 391 YIHIKN*NLYYETGIAPAAAR 329
>gb|BF627413.1|BF627413 HVSMEb0004M17f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0004M17f, mRNA sequence
Length = 773
Score = 32.6 bits (66), Expect = 1.7
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +1 / +3
Query: 274 KHRWSSEEDEALKQMVKRHGTKNWRTIACA 363
K W+ EEDE L V+ HG WR++ A
Sbjct: 114 KGAWTREEDERLVAHVRAHGEGCWRSLPSA 203
>gb|CV053715.1|CV053715 BNEL102d3 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL102d3 5' similar to histone
H1-like protein, mRNA sequence
Length = 606
Score = 32.1 bits (65), Expect = 2.3
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +1 / +3
Query: 277 HRWSSEEDEALKQMVKRHGTKNWRTI 354
H W +E+EAL HG WRTI
Sbjct: 54 HNWPLQEEEALGSGALIHGAVKWRTI 131
>gb|CV055415.1|CV055415 BNEL11D1 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL11D1 5' similar to histone
H1-like protein, mRNA sequence
Length = 612
Score = 32.1 bits (65), Expect = 2.3
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +1 / +3
Query: 274 KHRWSSEEDEALKQMVKRHGTKNWRTI 354
KH+W+SEE+E L+ + +H + RTI
Sbjct: 51 KHKWTSEEEEVLRCGLLKHVSGKGRTI 131
>gb|AL506245.1|AL506245 AL506245 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY02I03T 5',
mRNA sequence
Length = 620
Score = 31.2 bits (63), Expect = 3.0
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -3 / +1
Query: 392 RHELAFRPGIAHAIVRQFFVPCLFTICFSAS 300
R LA R G++ + F PC+F +CF +S
Sbjct: 448 RFGLACRRGLSAPVSTDSFHPCMFVLCFPSS 540
>gb|AL509664.1|AL509664 AL509664 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY02I03u 3',
mRNA sequence
Length = 626
Score = 31.2 bits (63), Expect = 3.0
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -3 / -1
Query: 392 RHELAFRPGIAHAIVRQFFVPCLFTICFSAS 300
R LA R G++ + F PC+F +CF +S
Sbjct: 173 RFGLACRRGLSAPVSTDSFHPCMFVLCFPSS 81
>gb|BG369396.1|BG369396 HVSMEi0024D21f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0024D21f, mRNA sequence
Length = 821
Score = 31.2 bits (63), Expect = 3.0
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -3 / -1
Query: 212 SISSDSTPWHSPTVSCGILLCNMSSATSS 126
++SS ++PW SPT + C SS++SS
Sbjct: 332 TVSSTNSPWPSPTPPSRLPCCTSSSSSSS 246
>gb|BG309101.2|BG309101 HVSMEc0002D06f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0002D06f, mRNA sequence
Length = 745
Score = 31.2 bits (63), Expect = 3.0
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -3 / -3
Query: 212 SISSDSTPWHSPTVSCGILLCNMSSATSS 126
++SS ++PW SPT + C SS++SS
Sbjct: 290 TVSSTNSPWPSPTPPSRLPCCTSSSSSSS 204
>gb|BG368841.2|BG368841 HVSMEi0020O15f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0020O15f, mRNA sequence
Length = 870
Score = 31.2 bits (63), Expect = 3.0
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -3 / +1
Query: 392 RHELAFRPGIAHAIVRQFFVPCLFTICFSAS 300
R LA R G++ + F PC+F +CF +S
Sbjct: 415 RFGLACRRGLSAPVSTDSFHPCMFVLCFPSS 507
>gb|AV909455.1|AV909455 AV909455 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak12o16 5', mRNA sequence
Length = 582
Score = 31.2 bits (63), Expect = 3.0
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -3 / +1
Query: 392 RHELAFRPGIAHAIVRQFFVPCLFTICFSAS 300
R LA R G++ + F PC+F +CF +S
Sbjct: 409 RFGLACRRGLSAPVSTDSFHPCMFVLCFPSS 501
>gb|AV911350.1|AV911350 AV911350 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak12o16 3', mRNA sequence
Length = 548
Score = 31.2 bits (63), Expect = 3.0
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -3 / -1
Query: 392 RHELAFRPGIAHAIVRQFFVPCLFTICFSAS 300
R LA R G++ + F PC+F +CF +S
Sbjct: 149 RFGLACRRGLSAPVSTDSFHPCMFVLCFPSS 57
>gb|BQ468848.1|BQ468848 HM02I17r HM Hordeum vulgare subsp. vulgare cDNA clone HM02I17
5-PRIME, mRNA sequence
Length = 482
Score = 31.2 bits (63), Expect = 3.0
Identities = 10/40 (25%), Positives = 24/40 (60%)
Frame = -3 / +3
Query: 209 ISSDSTPWHSPTVSCGILLCNMSSATSSDLLECFVELLAL 90
+SSD +H+ + + +C+M + + DL++C + ++ L
Sbjct: 276 VSSDRLSYHNKRKTLCVCICDMLWSRAHDLVQCVINIVVL 395
>gb|BQ661164.1|BQ661164 HM02D13u HM Hordeum vulgare subsp. vulgare cDNA clone HM02D13
3-PRIME, mRNA sequence
Length = 391
Score = 31.2 bits (63), Expect = 3.0
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -3 / -3
Query: 392 RHELAFRPGIAHAIVRQFFVPCLFTICFSAS 300
R LA R G++ + F PC+F +CF +S
Sbjct: 170 RFGLACRRGLSAPVSTDSFHPCMFVLCFPSS 78
>gb|BM100735.2|BM100735 EBpi01_SQ001_F05_R pistil, 1 DPA, no treatment, cv Optic, EBpi01
Hordeum vulgare subsp. vulgare cDNA clone
EBpi01_SQ001_F05 5', mRNA sequence
Length = 494
Score = 31.2 bits (63), Expect = 3.0
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -3 / +1
Query: 392 RHELAFRPGIAHAIVRQFFVPCLFTICFSAS 300
R LA R G++ + F PC+F +CF +S
Sbjct: 370 RFGLACRRGLSAPVSTDSFHPCMFVLCFPSS 462
>gb|BM101232.2|BM101232 EBpi01_SQ003_E10_R pistil, 1 DPA, no treatment, cv Optic, EBpi01
Hordeum vulgare subsp. vulgare cDNA clone
EBpi01_SQ003_E10 5', mRNA sequence
Length = 562
Score = 31.2 bits (63), Expect = 3.0
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -3 / +1
Query: 392 RHELAFRPGIAHAIVRQFFVPCLFTICFSAS 300
R LA R G++ + F PC+F +CF +S
Sbjct: 370 RFGLACRRGLSAPVSTDSFHPCMFVLCFPSS 462
>gb|BU990404.1|BU990404 HF24P08r HF Hordeum vulgare subsp. vulgare cDNA clone HF24P08
5-PRIME, mRNA sequence
Length = 558
Score = 31.2 bits (63), Expect = 3.0
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -3 / +2
Query: 392 RHELAFRPGIAHAIVRQFFVPCLFTICFSAS 300
R LA R G++ + F PC+F +CF +S
Sbjct: 389 RFGLACRRGLSAPVSTDSFHPCMFVLCFPSS 481
>gb|CA002462.1|CA002462 HS07J09r HS Hordeum vulgare subsp. vulgare cDNA clone HS07J09
5-PRIME, mRNA sequence
Length = 402
Score = 31.2 bits (63), Expect = 3.0
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -3 / -3
Query: 212 SISSDSTPWHSPTVSCGILLCNMSSATSS 126
++SS ++PW SPT + C SS++SS
Sbjct: 337 TVSSTNSPWPSPTPPSRLPCCTSSSSSSS 251
>gb|CA006987.1|CA006987 HU06F17r HU Hordeum vulgare subsp. vulgare cDNA clone HU06F17
5-PRIME, mRNA sequence
Length = 569
Score = 31.2 bits (63), Expect = 3.0
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -3 / +1
Query: 392 RHELAFRPGIAHAIVRQFFVPCLFTICFSAS 300
R LA R G++ + F PC+F +CF +S
Sbjct: 403 RFGLACRRGLSAPVSTDSFHPCMFVLCFPSS 495
>gb|CA022817.1|CA022817 HZ44H04r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ44H04
5-PRIME, mRNA sequence
Length = 597
Score = 31.2 bits (63), Expect = 3.0
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -3 / +1
Query: 392 RHELAFRPGIAHAIVRQFFVPCLFTICFSAS 300
R LA R G++ + F PC+F +CF +S
Sbjct: 424 RFGLACRRGLSAPVSTDSFHPCMFVLCFPSS 516
>gb|CB876723.1|CB876723 HP02D02T HP Hordeum vulgare subsp. vulgare cDNA clone HP02D02
5-PRIME, mRNA sequence
Length = 546
Score = 31.2 bits (63), Expect = 3.0
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -3 / -2
Query: 212 SISSDSTPWHSPTVSCGILLCNMSSATSS 126
++SS ++PW SPT + C SS++SS
Sbjct: 341 TVSSTNSPWPSPTPPSRLPCCTSSSSSSS 255
>gb|CB878516.1|CB878516 HP08N03T HP Hordeum vulgare subsp. vulgare cDNA clone HP08N03
5-PRIME, mRNA sequence
Length = 590
Score = 31.2 bits (63), Expect = 3.0
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -3 / +1
Query: 392 RHELAFRPGIAHAIVRQFFVPCLFTICFSAS 300
R LA R G++ + F PC+F +CF +S
Sbjct: 424 RFGLACRRGLSAPVSTDSFHPCMFVLCFPSS 516
>gb|CB880890.1|CB880890 HM08C02w HM Hordeum vulgare subsp. vulgare cDNA clone HM08C02
3-PRIME, mRNA sequence
Length = 536
Score = 31.2 bits (63), Expect = 3.0
Identities = 10/40 (25%), Positives = 24/40 (60%)
Frame = -3 / -2
Query: 209 ISSDSTPWHSPTVSCGILLCNMSSATSSDLLECFVELLAL 90
+SSD +H+ + + +C+M + + DL++C + ++ L
Sbjct: 211 VSSDRLSYHNKRKTLCVCICDMLWSRAHDLVQCVINIVVL 92
>gb|CV054726.1|CV054726 BNEL112f2 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL112f2 5' similar to putative
proteasome maturation factor, mRNA sequence
Length = 580
Score = 31.2 bits (63), Expect = 3.0
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -3 / +1
Query: 392 RHELAFRPGIAHAIVRQFFVPCLFTICFSAS 300
R LA R G++ + F PC+F +CF +S
Sbjct: 394 RFGLACRRGLSAPVSTDSFHPCMFVLCFPSS 486
>gb|CV058234.1|CV058234 BNEL35g6 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL35g6 5' similar to putative
proteasome maturation factor, mRNA sequence
Length = 560
Score = 31.2 bits (63), Expect = 3.0
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -3 / +1
Query: 392 RHELAFRPGIAHAIVRQFFVPCLFTICFSAS 300
R LA R G++ + F PC+F +CF +S
Sbjct: 394 RFGLACRRGLSAPVSTDSFHPCMFVLCFPSS 486
>gb|AF189727.1|AF189727 Hordeum vulgare NRT2.3 gene, promoter sequence
Length = 1557
Score = 31.2 bits (63), Expect = 3.0
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -1 / +2
Query: 169 HVVYYSATCLQQPHLTCLSVLLN 101
H+VY ATC QP TC+ LN
Sbjct: 41 HLVYDDATCKGQPPYTCMCTWLN 109
>gb|AF539980.1| Hordeum vulgare subsp. vulgare anther endoxylanase mRNA, partial
cds
Length = 1169
Score = 31.2 bits (63), Expect = 3.0
Identities = 15/48 (31%), Positives = 28/48 (58%)
Frame = -3 / -1
Query: 206 SSDSTPWHSPTVSCGILLCNMSSATSSDLLECFVELLALRWLIGNPSL 63
SS +TPW S + G + + S +++ + FV+LL++R + +P L
Sbjct: 833 SSSATPWASVVAATGCVFHSSMSLSTTLPVGRFVKLLSVRHMTQHPCL 690
>gb|AY541065.1| Hordeum vulgare subsp. vulgare APETALA3-like protein mRNA, complete
cds
Length = 1166
Score = 31.2 bits (63), Expect = 3.0
Identities = 10/40 (25%), Positives = 24/40 (60%)
Frame = -3 / +2
Query: 209 ISSDSTPWHSPTVSCGILLCNMSSATSSDLLECFVELLAL 90
+SSD +H+ + + +C+M + + DL++C + ++ L
Sbjct: 950 VSSDRLSYHNKRKTLCVCICDMLWSRAHDLVQCVINIVVL 1069
>gb|BU974738.1|BU974738 HB28O24r BC Hordeum vulgare subsp. vulgare cDNA clone HB28O24
5-PRIME, mRNA sequence
Length = 480
Score = 31.7 bits (64), Expect = 3.2
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +1 / +2
Query: 259 SSKNKKHRWSSEEDEALKQMVKRHGTKNWRTI 354
S K ++ WS EE + L V+R+GT NW +
Sbjct: 347 SYKRRQVTWSEEELDFLWIGVRRYGTSNWNAM 442
>gb|BF260996.2|BF260996 HVSMEf0023H20f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0023H20f, mRNA sequence
Length = 798
Score = 30.8 bits (62), Expect = 4.1
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = -3 / -1
Query: 215 PSISSDSTPWHSPTVSCGILLCNMSSATSSDLL 117
PS +DST H+P + G+LL ++ + DL+
Sbjct: 627 PSTKNDSTAGHNPNCNVGMLLSFLNKSNDLDLV 529
>gb|BI956312.1|BI956312 HVSMEn0002E21f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0002E21f, mRNA sequence
Length = 441
Score = 30.8 bits (62), Expect = 4.1
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -1 / +3
Query: 346 ASFSSHVFLPFALVPHLPLMTIC 278
A+ + V LP L+PHLPL+ +C
Sbjct: 312 ATHPAPVLLPAVLLPHLPLLLLC 380
>gb|BQ466972.1|BQ466972 HS02C14r HS Hordeum vulgare subsp. vulgare cDNA clone HS02C14
5-PRIME, mRNA sequence
Length = 336
Score = 30.8 bits (62), Expect = 4.1
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -3 / -2
Query: 209 ISSDSTPWHSPTVSCGILLCNMSSATSS 126
+SS ++PW SPT + C SS++SS
Sbjct: 335 VSSTNSPWPSPTPPSRLPCCTSSSSSSS 252
>gb|BF617445.3|BF617445 HVSMEc0017G08f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0017G08f, mRNA sequence
Length = 574
Score = 31.2 bits (63), Expect = 4.3
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = +1 / +2
Query: 439 WSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEHW 555
+++ EE + R ++ GN+W + PGRT + ++ W
Sbjct: 164 FTEAEEDLVFRMHRLVGNRWELIAGRIPGRTAEEVEMFW 280
>gb|BG369253.2|BG369253 HVSMEi0023G17f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0023G17f, mRNA sequence
Length = 832
Score = 31.2 bits (63), Expect = 4.3
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +1 / -1
Query: 265 KNKKHRWSSEEDEALKQMVKRHGTK 339
+NKK W + E +KQ K+H TK
Sbjct: 577 QNKKRSWKKKGQEKIKQ*TKKHATK 503
>gb|AV922828.1|AV922828 AV922828 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd2i08 5', mRNA sequence
Length = 458
Score = 31.2 bits (63), Expect = 4.3
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = +1 / +1
Query: 439 WSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEHW 555
+++ EE + R ++ GN+W + PGRT + ++ W
Sbjct: 175 FTEAEEDLVFRMHRLVGNRWELIAGRIPGRTAEEVEMFW 291
>gb|AV924475.1|AV924475 AV924475 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd14l15 5', mRNA sequence
Length = 552
Score = 31.2 bits (63), Expect = 4.3
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = +1 / +2
Query: 439 WSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEHW 555
+++ EE + R ++ GN+W + PGRT + ++ W
Sbjct: 179 FTEAEEDLVFRMHRLVGNRWELIAGRIPGRTAEEVEMFW 295
>gb|AV924476.1|AV924476 AV924476 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd14l16 5', mRNA sequence
Length = 498
Score = 31.2 bits (63), Expect = 4.3
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = +1 / +2
Query: 439 WSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEHW 555
+++ EE + R ++ GN+W + PGRT + ++ W
Sbjct: 125 FTEAEEDLVFRMHRLVGNRWELIAGRIPGRTAEEVEMFW 241
>gb|AV927549.1|AV927549 AV927549 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd2i08 3', mRNA sequence
Length = 433
Score = 31.2 bits (63), Expect = 4.3
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = +1 / -1
Query: 439 WSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEHW 555
+++ EE + R ++ GN+W + PGRT + ++ W
Sbjct: 310 FTEAEEDLVFRMHRLVGNRWELIAGRIPGRTAEEVEMFW 194
>gb|AV927559.1|AV927559 AV927559 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd2j01 3', mRNA sequence
Length = 484
Score = 31.2 bits (63), Expect = 4.3
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = +1 / -3
Query: 439 WSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEHW 555
+++ EE + R ++ GN+W + PGRT + ++ W
Sbjct: 320 FTEAEEDLVFRMHRLVGNRWELIAGRIPGRTAEEVEMFW 204
>gb|AV929566.1|AV929566 AV929566 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd14l15 3', mRNA sequence
Length = 519
Score = 31.2 bits (63), Expect = 4.3
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = +1 / -2
Query: 439 WSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEHW 555
+++ EE + R ++ GN+W + PGRT + ++ W
Sbjct: 353 FTEAEEDLVFRMHRLVGNRWELIAGRIPGRTAEEVEMFW 237
>gb|AV932316.1|AV932316 AV932316 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal3c04 5', mRNA sequence
Length = 539
Score = 31.2 bits (63), Expect = 4.3
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = +1 / +1
Query: 439 WSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEHW 555
+++ EE + R ++ GN+W + PGRT + ++ W
Sbjct: 172 FTEAEEDLVFRMHRLVGNRWELIAGRIPGRTAEEVEMFW 288
>gb|AV935165.1|AV935165 AV935165 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal3c04 3', mRNA sequence
Length = 518
Score = 31.2 bits (63), Expect = 4.3
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = +1 / -2
Query: 439 WSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEHW 555
+++ EE + R ++ GN+W + PGRT + ++ W
Sbjct: 343 FTEAEEDLVFRMHRLVGNRWELIAGRIPGRTAEEVEMFW 227
>gb|BJ447171.1|BJ447171 BJ447171 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak14f07 5', mRNA sequence
Length = 445
Score = 31.2 bits (63), Expect = 4.3
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = +1 / +1
Query: 439 WSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEHW 555
+++ EE + R ++ GN+W + PGRT + ++ W
Sbjct: 100 FTEAEEDLVFRMHRLVGNRWELIAGRIPGRTAEEVEMFW 216
>gb|BJ469328.1|BJ469328 BJ469328 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal20f13 5', mRNA sequence
Length = 492
Score = 31.2 bits (63), Expect = 4.3
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = +1 / +2
Query: 439 WSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEHW 555
+++ EE + R ++ GN+W + PGRT + ++ W
Sbjct: 164 FTEAEEDLVFRMHRLVGNRWELIAGRIPGRTAEEVEMFW 280
>gb|BJ471394.1|BJ471394 BJ471394 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal18c22 5', mRNA sequence
Length = 543
Score = 31.2 bits (63), Expect = 4.3
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = +1 / +2
Query: 439 WSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEHW 555
+++ EE + R ++ GN+W + PGRT + ++ W
Sbjct: 176 FTEAEEDLVFRMHRLVGNRWELIAGRIPGRTAEEVEMFW 292
>gb|BJ472498.1|BJ472498 BJ472498 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal34o06 5', mRNA sequence
Length = 542
Score = 31.2 bits (63), Expect = 4.3
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = +1 / +1
Query: 439 WSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEHW 555
+++ EE + R ++ GN+W + PGRT + ++ W
Sbjct: 175 FTEAEEDLVFRMHRLVGNRWELIAGRIPGRTAEEVEMFW 291
>gb|BJ472717.1|BJ472717 BJ472717 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal36g01 5', mRNA sequence
Length = 553
Score = 31.2 bits (63), Expect = 4.3
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = +1 / +3
Query: 439 WSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEHW 555
+++ EE + R ++ GN+W + PGRT + ++ W
Sbjct: 186 FTEAEEDLVFRMHRLVGNRWELIAGRIPGRTAEEVEMFW 302
>gb|BJ473521.1|BJ473521 BJ473521 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal15a05 3', mRNA sequence
Length = 495
Score = 31.2 bits (63), Expect = 4.3
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = +1 / -2
Query: 439 WSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEHW 555
+++ EE + R ++ GN+W + PGRT + ++ W
Sbjct: 320 FTEAEEDLVFRMHRLVGNRWELIAGRIPGRTAEEVEMFW 204
>gb|BJ474001.1|BJ474001 BJ474001 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal18c22 3', mRNA sequence
Length = 475
Score = 31.2 bits (63), Expect = 4.3
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = +1 / -2
Query: 439 WSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEHW 555
+++ EE + R ++ GN+W + PGRT + ++ W
Sbjct: 300 FTEAEEDLVFRMHRLVGNRWELIAGRIPGRTAEEVEMFW 184
>gb|BJ474636.1|BJ474636 BJ474636 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal20f13 3', mRNA sequence
Length = 488
Score = 31.2 bits (63), Expect = 4.3
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = +1 / -2
Query: 439 WSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEHW 555
+++ EE + R ++ GN+W + PGRT + ++ W
Sbjct: 310 FTEAEEDLVFRMHRLVGNRWELIAGRIPGRTAEEVEMFW 194
>gb|BJ476463.1|BJ476463 BJ476463 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal34o06 3', mRNA sequence
Length = 523
Score = 31.2 bits (63), Expect = 4.3
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = +1 / -2
Query: 439 WSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEHW 555
+++ EE + R ++ GN+W + PGRT + ++ W
Sbjct: 348 FTEAEEDLVFRMHRLVGNRWELIAGRIPGRTAEEVEMFW 232
>gb|BJ476673.1|BJ476673 BJ476673 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal36g01 3', mRNA sequence
Length = 475
Score = 31.2 bits (63), Expect = 4.3
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = +1 / -2
Query: 439 WSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEHW 555
+++ EE + R ++ GN+W + PGRT + ++ W
Sbjct: 300 FTEAEEDLVFRMHRLVGNRWELIAGRIPGRTAEEVEMFW 184
>gb|BU994484.1|BU994484 HM07D17r HM Hordeum vulgare subsp. vulgare cDNA clone HM07D17
5-PRIME, mRNA sequence
Length = 525
Score = 31.2 bits (63), Expect = 4.3
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = +1 / -2
Query: 439 WSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEHW 555
+++ EE + R ++ GN+W + PGRT + ++ W
Sbjct: 383 FTEAEEDLVFRMHRLVGNRWELIAGRIPGRTAEEVEMFW 267
>gb|BM443536.2|BM443536 EBro02_SQ005_J07_R root, 3 week, hydroponic grown, low nitrogen, cv
Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone
EBro02_SQ005_J07 5', mRNA sequence
Length = 575
Score = 25.4 bits (50), Expect(2) = 5.3
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = -1 / -2
Query: 349 FASFSSHVFLPFALVPHLP 293
F +FSS VFLP L P LP
Sbjct: 367 FWAFSSGVFLPPFLPPFLP 311
Score = 23.2 bits (45), Expect(2) = 5.3
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -1 / -3
Query: 148 TCLQQPHLTCLSVLLNC*PS 89
+CL L+CL L+C PS
Sbjct: 330 SCLPSCRLSCLPCRLSCLPS 271
>gb|CV057208.1|CV057208 BNEL25b9 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL25b9 5' similar to E2,
ubiquitin-conjugating enzyme 10, mRNA sequence
Length = 518
Score = 30.3 bits (61), Expect = 5.7
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = +3 / +3
Query: 378 CQLMPFKMEVPSRPSNKQRALVATGGTKIDPCAASLWKQMV*NGQ 512
C + P P RPS R+ GT P A LW+++ G+
Sbjct: 63 CLISPAPFPSPWRPSGSSRSSRTCRGTPPPPAAPVLWQKICSTGK 197
>gb|BE437289.1|BE437289 SFR003.D05F990621 ITEC SFR Barley Leaf Epidermis Library Hordeum
vulgare subsp. vulgare cDNA clone SF, mRNA sequence
Length = 771
Score = 30.8 bits (62), Expect = 5.9
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = +1 / +3
Query: 430 KEPWSQQEELRLIRAQQVYGNKWCKMVKH 516
+E W++ E R + A ++YG W ++ +H
Sbjct: 519 RERWTEAEHKRFLEALKLYGRAWQRIEEH 605
>gb|BF617511.2|BF617511 HVSMEc0017L20f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0017L20f, mRNA sequence
Length = 783
Score = 30.8 bits (62), Expect = 5.9
Identities = 11/41 (26%), Positives = 21/41 (51%)
Frame = +1 / +1
Query: 430 KEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
+E W++ E + + A ++YG W + H +T +K H
Sbjct: 430 RERWTEAEHKQFLEALKLYGRAWQLIE*HVGTKTGVQIKSH 552
>gb|BJ470036.1|BJ470036 BJ470036 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal14p07 5', mRNA sequence
Length = 470
Score = 30.8 bits (62), Expect = 5.9
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = +1 / +3
Query: 430 KEPWSQQEELRLIRAQQVYGNKWCKMVKH 516
+E W++ E R + A ++YG W ++ +H
Sbjct: 372 RERWTEAEHKRFLEALKLYGRAWQRIEEH 458
>gb|CA029145.1|CA029145 HZ64F11r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ64F11
5-PRIME, mRNA sequence
Length = 440
Score = 30.8 bits (62), Expect = 5.9
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +1 / +2
Query: 265 KNKKHRWSSEEDEALKQMVKRHGTKNW 345
++K WS +E +AL V+RHG NW
Sbjct: 44 RSKPDYWSEDELDALWIGVRRHGRGNW 124
>gb|AL506561.1|AL506561 AL506561 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY03I15T 5',
mRNA sequence
Length = 700
Score = 29.9 bits (60), Expect = 7.8
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = +3 / +2
Query: 378 CQLMPFKMEVPSRPSNKQRALVATGGTKIDPCAASLWKQMV*NGQ 512
C + P P RPS R+ GT P A LW+++ G+
Sbjct: 47 CLISPAPSPSPWRPSGSSRSSRTCRGTPPPPAAPVLWQKICSTGK 181
>gb|AL507398.1|AL507398 AL507398 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY05H04V 5',
mRNA sequence
Length = 668
Score = 29.9 bits (60), Expect = 7.8
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = +3 / +2
Query: 378 CQLMPFKMEVPSRPSNKQRALVATGGTKIDPCAASLWKQMV*NGQ 512
C + P P RPS R+ GT P A LW+++ G+
Sbjct: 38 CLISPAPSPSPWRPSGSSRSSRTCRGTPPPPAAPVLWQKICSTGK 172
>gb|AL507709.1|AL507709 AL507709 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY06K03V 5',
mRNA sequence
Length = 700
Score = 29.9 bits (60), Expect = 7.8
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = +3 / +1
Query: 378 CQLMPFKMEVPSRPSNKQRALVATGGTKIDPCAASLWKQMV*NGQ 512
C + P P RPS R+ GT P A LW+++ G+
Sbjct: 49 CLISPAPSPSPWRPSGSSRSSRTCRGTPPPPAAPVLWQKICSTGK 183
>gb|AL508576.1|AL508576 AL508576 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY09C18V 5',
mRNA sequence
Length = 633
Score = 29.9 bits (60), Expect = 7.8
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = +3 / +3
Query: 378 CQLMPFKMEVPSRPSNKQRALVATGGTKIDPCAASLWKQMV*NGQ 512
C + P P RPS R+ GT P A LW+++ G+
Sbjct: 51 CLISPAPSPSPWRPSGSSRSSRTCRGTPPPPAAPVLWQKICSTGK 185
>gb|AL509112.1|AL509112 AL509112 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY10L21V 5',
mRNA sequence
Length = 601
Score = 29.9 bits (60), Expect = 7.8
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = +3 / +3
Query: 378 CQLMPFKMEVPSRPSNKQRALVATGGTKIDPCAASLWKQMV*NGQ 512
C + P P RPS R+ GT P A LW+++ G+
Sbjct: 33 CLISPAPSPSPWRPSGSSRSSRTCRGTPPPPAAPVLWQKICSTGK 167
>gb|BF625905.2|BF625905 HVSMEa0014D11f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0014D11f, mRNA sequence
Length = 480
Score = 29.9 bits (60), Expect = 7.8
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = +3 / +1
Query: 378 CQLMPFKMEVPSRPSNKQRALVATGGTKIDPCAASLWKQMV*NGQ 512
C + P P RPS R+ GT P A LW+++ G+
Sbjct: 31 CLISPAPSPSPWRPSGSSRSSRTCRGTPPPPAAPVLWQKICSTGK 165
>gb|BF620119.2|BF620119 HVSMEc0018C05f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0018C05f, mRNA sequence
Length = 593
Score = 29.9 bits (60), Expect = 7.8
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = +3 / +3
Query: 378 CQLMPFKMEVPSRPSNKQRALVATGGTKIDPCAASLWKQMV*NGQ 512
C + P P RPS R+ GT P A LW+++ G+
Sbjct: 42 CLISPAPSPSPWRPSGSSRSSRTCRGTPPPPAAPVLWQKICSTGK 176
>gb|BF254133.2|BF254133 HVSMEf0003B22f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0003B22f, mRNA sequence
Length = 556
Score = 29.9 bits (60), Expect = 7.8
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = +3 / +2
Query: 378 CQLMPFKMEVPSRPSNKQRALVATGGTKIDPCAASLWKQMV*NGQ 512
C + P P RPS R+ GT P A LW+++ G+
Sbjct: 44 CLISPAPSPSPWRPSGSSRSSRTCRGTPPPPAAPVLWQKICSTGK 178
>gb|BF256933.2|BF256933 HVSMEf0011G15f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0011G15f, mRNA sequence
Length = 578
Score = 29.9 bits (60), Expect = 7.8
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = +3 / +3
Query: 378 CQLMPFKMEVPSRPSNKQRALVATGGTKIDPCAASLWKQMV*NGQ 512
C + P P RPS R+ GT P A LW+++ G+
Sbjct: 48 CLISPAPSPSPWRPSGSSRSSRTCRGTPPPPAAPVLWQKICSTGK 182
>gb|BI949150.1|BI949150 HVSMEl0012J02f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0012J02f, mRNA sequence
Length = 972
Score = 29.9 bits (60), Expect = 7.8
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = +3 / +2
Query: 378 CQLMPFKMEVPSRPSNKQRALVATGGTKIDPCAASLWKQMV*NGQ 512
C + P P RPS R+ GT P A LW+++ G+
Sbjct: 50 CLISPAPSPSPWRPSGSSRSSRTCRGTPPPPAAPVLWQKICSTGK 184
>gb|BF065123.1|BF065123 HV_CEb0023E02f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0023E02f, mRNA sequence
Length = 579
Score = 29.9 bits (60), Expect = 7.8
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = +3 / +2
Query: 378 CQLMPFKMEVPSRPSNKQRALVATGGTKIDPCAASLWKQMV*NGQ 512
C + P P RPS R+ GT P A LW+++ G+
Sbjct: 68 CLISPAPSPSPWRPSGSSRSSRTCRGTPPPPAAPVLWQKICSTGK 202
>gb|BF065845.1|BF065845 HV_CEb0014C11f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0014C11f, mRNA sequence
Length = 818
Score = 29.9 bits (60), Expect = 7.8
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = +3 / +1
Query: 378 CQLMPFKMEVPSRPSNKQRALVATGGTKIDPCAASLWKQMV*NGQ 512
C + P P RPS R+ GT P A LW+++ G+
Sbjct: 43 CLISPAPSPSPWRPSGSSRSSRTCRGTPPPPAAPVLWQKICSTGK 177
>gb|BF065868.1|BF065868 HV_CEb0014D11f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0014D11f, mRNA sequence
Length = 818
Score = 29.9 bits (60), Expect = 7.8
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = +3 / +1
Query: 378 CQLMPFKMEVPSRPSNKQRALVATGGTKIDPCAASLWKQMV*NGQ 512
C + P P RPS R+ GT P A LW+++ G+
Sbjct: 43 CLISPAPSPSPWRPSGSSRSSRTCRGTPPPPAAPVLWQKICSTGK 177
>gb|BE216459.2|BE216459 HV_CEb0010I20f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0010I20f, mRNA sequence
Length = 718
Score = 29.9 bits (60), Expect = 7.8
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = +3 / +2
Query: 378 CQLMPFKMEVPSRPSNKQRALVATGGTKIDPCAASLWKQMV*NGQ 512
C + P P RPS R+ GT P A LW+++ G+
Sbjct: 44 CLISPAPSPSPWRPSGSSRSSRTCRGTPPPPAAPVLWQKICSTGK 178
>gb|AW982385.3|AW982385 HVSMEg0003C03f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0003C03f, mRNA sequence
Length = 868
Score = 29.9 bits (60), Expect = 7.8
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = +3 / +2
Query: 378 CQLMPFKMEVPSRPSNKQRALVATGGTKIDPCAASLWKQMV*NGQ 512
C + P P RPS R+ GT P A LW+++ G+
Sbjct: 50 CLISPAPSPSPWRPSGSSRSSRTCRGTPPPPAAPVLWQKICSTGK 184
>gb|BG345115.2|BG345115 HVSMEg0018M01f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0018M01f, mRNA sequence
Length = 642
Score = 29.9 bits (60), Expect = 7.8
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = +3 / +3
Query: 378 CQLMPFKMEVPSRPSNKQRALVATGGTKIDPCAASLWKQMV*NGQ 512
C + P P RPS R+ GT P A LW+++ G+
Sbjct: 45 CLISPAPSPSPWRPSGSSRSSRTCRGTPPPPAAPVLWQKICSTGK 179
>gb|BG365829.2|BG365829 HVSMEi0004G07f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0004G07f, mRNA sequence
Length = 929
Score = 29.9 bits (60), Expect = 7.8
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = +3 / +1
Query: 378 CQLMPFKMEVPSRPSNKQRALVATGGTKIDPCAASLWKQMV*NGQ 512
C + P P RPS R+ GT P A LW+++ G+
Sbjct: 52 CLISPAPSPSPWRPSGSSRSSRTCRGTPPPPAAPVLWQKICSTGK 186
>gb|BE216075.3|BE216075 HV_CEb0009F09f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0009F09f, mRNA sequence
Length = 550
Score = 29.9 bits (60), Expect = 7.8
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = +3 / +3
Query: 378 CQLMPFKMEVPSRPSNKQRALVATGGTKIDPCAASLWKQMV*NGQ 512
C + P P RPS R+ GT P A LW+++ G+
Sbjct: 33 CLISPAPSPSPWRPSGSSRSSRTCRGTPPPPAAPVLWQKICSTGK 167
>gb|AV915791.1|AV915791 AV915791 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags16a11 5', mRNA sequence
Length = 634
Score = 29.9 bits (60), Expect = 7.8
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = +3 / +3
Query: 378 CQLMPFKMEVPSRPSNKQRALVATGGTKIDPCAASLWKQMV*NGQ 512
C + P P RPS R+ GT P A LW+++ G+
Sbjct: 63 CLISPAPSPSPWRPSGSSRSSRTCRGTPPPPAAPVLWQKICSTGK 197
>gb|AV917276.1|AV917276 AV917276 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags18d18 5', mRNA sequence
Length = 687
Score = 29.9 bits (60), Expect = 7.8
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = +3 / +2
Query: 378 CQLMPFKMEVPSRPSNKQRALVATGGTKIDPCAASLWKQMV*NGQ 512
C + P P RPS R+ GT P A LW+++ G+
Sbjct: 62 CLISPAPSPSPWRPSGSSRSSRTCRGTPPPPAAPVLWQKICSTGK 196
>gb|AV924358.1|AV924358 AV924358 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd14e11 5', mRNA sequence
Length = 690
Score = 29.9 bits (60), Expect = 7.8
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = +3 / +1
Query: 378 CQLMPFKMEVPSRPSNKQRALVATGGTKIDPCAASLWKQMV*NGQ 512
C + P P RPS R+ GT P A LW+++ G+
Sbjct: 61 CLISPAPSPSPWRPSGSSRSSRTCRGTPPPPAAPVLWQKICSTGK 195
>gb|AV924359.1|AV924359 AV924359 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd14e12 5', mRNA sequence
Length = 722
Score = 29.9 bits (60), Expect = 7.8
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = +3 / +1
Query: 378 CQLMPFKMEVPSRPSNKQRALVATGGTKIDPCAASLWKQMV*NGQ 512
C + P P RPS R+ GT P A LW+++ G+
Sbjct: 61 CLISPAPSPSPWRPSGSSRSSRTCRGTPPPPAAPVLWQKICSTGK 195
>gb|AV924486.1|AV924486 AV924486 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd14m03 5', mRNA sequence
Length = 590
Score = 29.9 bits (60), Expect = 7.8
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = +3 / +2
Query: 378 CQLMPFKMEVPSRPSNKQRALVATGGTKIDPCAASLWKQMV*NGQ 512
C + P P RPS R+ GT P A LW+++ G+
Sbjct: 62 CLISPAPSPSPWRPSGSSRSSRTCRGTPPPPAAPVLWQKICSTGK 196
>gb|AV924487.1|AV924487 AV924487 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd14m04 5', mRNA sequence
Length = 709
Score = 29.9 bits (60), Expect = 7.8
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = +3 / +1
Query: 378 CQLMPFKMEVPSRPSNKQRALVATGGTKIDPCAASLWKQMV*NGQ 512
C + P P RPS R+ GT P A LW+++ G+
Sbjct: 61 CLISPAPSPSPWRPSGSSRSSRTCRGTPPPPAAPVLWQKICSTGK 195
>gb|AV924495.1|AV924495 AV924495 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd14m15 5', mRNA sequence
Length = 553
Score = 29.9 bits (60), Expect = 7.8
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = +3 / +3
Query: 378 CQLMPFKMEVPSRPSNKQRALVATGGTKIDPCAASLWKQMV*NGQ 512
C + P P RPS R+ GT P A LW+++ G+
Sbjct: 30 CLISPAPSPSPWRPSGSSRSSRTCRGTPPPPAAPVLWQKICSTGK 164
>gb|AV932305.1|AV932305 AV932305 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal3b09 5', mRNA sequence
Length = 692
Score = 29.9 bits (60), Expect = 7.8
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = +3 / +1
Query: 378 CQLMPFKMEVPSRPSNKQRALVATGGTKIDPCAASLWKQMV*NGQ 512
C + P P RPS R+ GT P A LW+++ G+
Sbjct: 31 CLISPAPSPSPWRPSGSSRSSRTCRGTPPPPAAPVLWQKICSTGK 165
>gb|AV932306.1|AV932306 AV932306 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal3b10 5', mRNA sequence
Length = 547
Score = 29.9 bits (60), Expect = 7.8
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = +3 / +1
Query: 378 CQLMPFKMEVPSRPSNKQRALVATGGTKIDPCAASLWKQMV*NGQ 512
C + P P RPS R+ GT P A LW+++ G+
Sbjct: 13 CLIXPAPSPSPWRPSGSSRSSRTCRGTPPPPAAPVLWQKICSTGK 147
>gb|AV932498.1|AV932498 AV932498 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal3o14 5', mRNA sequence
Length = 637
Score = 29.9 bits (60), Expect = 7.8
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = +3 / +3
Query: 378 CQLMPFKMEVPSRPSNKQRALVATGGTKIDPCAASLWKQMV*NGQ 512
C + P P RPS R+ GT P A LW+++ G+
Sbjct: 60 CLISPAPSPSPWRPSGSSRSSRTCRGTPPPPAAPVLWQKICSTGK 194
>gb|AV933038.1|AV933038 AV933038 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal5b23 5', mRNA sequence
Length = 624
Score = 29.9 bits (60), Expect = 7.8
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = +3 / +3
Query: 378 CQLMPFKMEVPSRPSNKQRALVATGGTKIDPCAASLWKQMV*NGQ 512
C + P P RPS R+ GT P A LW+++ G+
Sbjct: 54 CLISPAPSPSPWRPSGSSRSSRTCRGTPPPPAAPVLWQKICSTGK 188
>gb|AV934346.1|AV934346 AV934346 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal8e19 5', mRNA sequence
Length = 553
Score = 29.9 bits (60), Expect = 7.8
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = +3 / +2
Query: 378 CQLMPFKMEVPSRPSNKQRALVATGGTKIDPCAASLWKQMV*NGQ 512
C + P P RPS R+ GT P A LW+++ G+
Sbjct: 26 CLISPAPSPSPWRPSGSSRSSRTCRGTPPPPAAPVLWQKICSTGK 160
>gb|AV934420.1|AV934420 AV934420 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal8p24 5', mRNA sequence
Length = 501
Score = 29.9 bits (60), Expect = 7.8
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = +3 / +3
Query: 378 CQLMPFKMEVPSRPSNKQRALVATGGTKIDPCAASLWKQMV*NGQ 512
C + P P RPS R+ GT P A LW+++ G+
Sbjct: 15 CLISPAPSPSPWRPSGSSRSSRTCRGTPPPPAAPVLWQKICSTGK 149
>gb|BM815996.1|BM815996 HB106A09_SK.ab1 HB Hordeum vulgare subsp. vulgare cDNA clone
HB106A09_SK.ab1 similar to ubiquitin-conjugating enzyme
UBC2 [Mesembryanthemum crystallinum],
At1g64230/F22C12_17 [Arabidopsis thaliana], AT5g53300
[Arabidopsis thaliana], AT5g41700 [Arabidopsis
thaliana], mRNA sequence
Length = 850
Score = 29.9 bits (60), Expect = 7.8
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = +3 / +2
Query: 378 CQLMPFKMEVPSRPSNKQRALVATGGTKIDPCAASLWKQMV*NGQ 512
C + P P RPS R+ GT P A LW+++ G+
Sbjct: 80 CLISPAPSPSPWRPSGSSRSSRTCRGTPPPPAAPVLWQKICSTGK 214
>gb|BQ460129.1|BQ460129 HA07C14r HA Hordeum vulgare subsp. vulgare cDNA clone HA07C14
5-PRIME, mRNA sequence
Length = 651
Score = 29.9 bits (60), Expect = 7.8
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = +3 / +1
Query: 378 CQLMPFKMEVPSRPSNKQRALVATGGTKIDPCAASLWKQMV*NGQ 512
C + P P RPS R+ GT P A LW+++ G+
Sbjct: 46 CLISPAPSPSPWRPSGSSRSSRTCRGTPPPPAAPVLWQKICSTGK 180
>gb|BQ467749.1|BQ467749 HS04M03r HS Hordeum vulgare subsp. vulgare cDNA clone HS04M03
5-PRIME, mRNA sequence
Length = 497
Score = 29.9 bits (60), Expect = 7.8
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = +3 / +3
Query: 378 CQLMPFKMEVPSRPSNKQRALVATGGTKIDPCAASLWKQMV*NGQ 512
C + P P RPS R+ GT P A LW+++ G+
Sbjct: 63 CLISPAPSPSPWRPSGSSRSSRTCRGTPPPPAAPVLWQKICSTGK 197
>gb|BQ470429.1|BQ470429 HX02P08r HX Hordeum vulgare subsp. vulgare cDNA clone HX02P08
5-PRIME, mRNA sequence
Length = 495
Score = 29.9 bits (60), Expect = 7.8
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = +3 / +1
Query: 378 CQLMPFKMEVPSRPSNKQRALVATGGTKIDPCAASLWKQMV*NGQ 512
C + P P RPS R+ GT P A LW+++ G+
Sbjct: 61 CLISPAPSPSPWRPSGSSRSSRTCRGTPPPPAAPVLWQKICSTGK 195
Database: Hordeum_nucl_with_EST.fasta
Posted date: May 2, 2006 2:38 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.311 0.125 0.383
Matrix: BLOSUM62
Number of Hits to DB: 288,855,547
Number of Sequences: 312970
Number of extensions: 4352306
Number of successful extensions: 53711
Number of sequences better than 10.0: 412
length of database: 58,378,179
effective HSP length: 53
effective length of database: 41,790,769
effective search space used: 5516381508
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 0 ( 0.0 bits)
S1: 42 (21.8 bits)