TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QBTB.006B01F020311.3.1
(609 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AV932103.1|AV932103 AV932103 K. Sato unpublished cDNA li... 303 6e-082
gb|BF264487.2|BF264487 HV_CEa0009I22f Hordeum vulgare seedl... 301 3e-081
gb|CA009590.1|CA009590 HU14I23r HU Hordeum vulgare subsp. v... 298 2e-080
gb|CA024621.1|CA024621 HZ49N06r HZ Hordeum vulgare subsp. v... 280 6e-075
gb|CA029603.1|CA029603 HZ65L02r HZ Hordeum vulgare subsp. v... 280 6e-075
gb|CA029433.1|CA029433 HZ65D06r HZ Hordeum vulgare subsp. v... 215 2e-055
gb|BU979580.1|BU979580 HA16J20r HA Hordeum vulgare subsp. v... 211 3e-054
gb|CA029014.1|CA029014 HZ63P04r HZ Hordeum vulgare subsp. v... 186 1e-050
gb|BM374077.2|BM374077 EBma03_SQ003_J08_R maternal, 8 DPA, ... 194 5e-049
gb|BI949335.1|BI949335 HVSMEl0013G12f Hordeum vulgare spike... 192 1e-048
gb|CA024152.1|CA024152 HZ48I02r HZ Hordeum vulgare subsp. v... 174 3e-043
gb|BM100077.2|BM100077 EBma01_SQ001_B24_R maternal, 4 DPA, ... 160 8e-039
gb|AW982740.2|AW982740 HVSMEg0004B07f Hordeum vulgare pre-a... 134 3e-036
gb|CA024885.1|CA024885 HZ50J14r HZ Hordeum vulgare subsp. v... 149 2e-035
gb|CA026435.1|CA026435 HZ55O15r HZ Hordeum vulgare subsp. v... 149 2e-035
gb|BF627539.2|BF627539 HVSMEb0005C01f Hordeum vulgare seedl... 147 5e-035
gb|CA020538.1|CA020538 HZ36J20r HZ Hordeum vulgare subsp. v... 147 7e-035
gb|BI952689.1|BI952689 HVSMEm0007G12f Hordeum vulgare green... 145 3e-034
gb|CA024147.1|CA024147 HZ48H21r HZ Hordeum vulgare subsp. v... 143 7e-034
gb|CA028957.1|CA028957 HZ63L22r HZ Hordeum vulgare subsp. v... 138 2e-032
>gb|AV932103.1|AV932103 AV932103 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal2e14 5', mRNA sequence
Length = 644
Score = 303 bits (657), Expect = 6e-082
Identities = 123/154 (79%), Positives = 136/154 (88%)
Frame = +1 / +1
Query: 112 ASGLNSTQMVTLKVDASPKLARKIPDTFLGVFFEEMGHGGAGGIWAELVSNRGFEAGGPN 291
AS L +TQ TLKVDAS +LARKIPDT G+FFEE+ H GAGGIWAELVSNRGFEAGG +
Sbjct: 181 ASELQATQTATLKVDASSQLARKIPDTLFGMFFEEINHAGAGGIWAELVSNRGFEAGGLH 360
Query: 292 TPSNIDPWLIVGDDSSVYVETDRSSCFSRNIVALRMEVLCNDCPAGGVGIYNPGFWGMNI 471
TPSNIDPW I+GDDSS++V TDR+SCFSRNI+ALRMEVLC+DCPA GVGIYNPGFWGMNI
Sbjct: 361 TPSNIDPWSIIGDDSSIFVATDRTSCFSRNIIALRMEVLCDDCPASGVGIYNPGFWGMNI 540
Query: 472 EDGKTYHLVMYVKSPKTTCLTVSLTSSDGLQNLA 573
EDGKTY+LVMYVKS + LTVSL SSDGLQNLA
Sbjct: 541 EDGKTYNLVMYVKSAEAAELTVSLASSDGLQNLA 642
Score = 238 bits (515), Expect = 2e-062
Identities = 108/159 (67%), Positives = 113/159 (71%)
Frame = -2 / -1
Query: 575 EARFCNPSELVSETVKHVVFGDLTYITR*YVFPSSMFMPQNPGL*MPTPPAGQSLQRTSI 396
EARFCNPSEL +ETV DLTYITR VFPSSMFMPQNPGL*MPTP AGQS QRTSI
Sbjct: 644 EARFCNPSELANETVNSAASADLTYITRL*VFPSSMFMPQNPGL*MPTPLAGQSSQRTSI 465
Query: 395 LRATMFRLKHDXXXXXXXXXXXXXXXSQGSMFDGVLGPPASKPLLLTSSAHIPPAPPWPI 216
LRA MFRLKHD GS+FDGV PPASKPLLLTSSAH+PPAP W I
Sbjct: 464 LRAIMFRLKHDVRSVATNMEESSPIIDHGSIFDGVWSPPASKPLLLTSSAHMPPAPAWLI 285
Query: 215 SSKNTPRNVSGIFRASFGEASTLRVTIWVEFRPDAPPRH 99
SSKN P +VSGIFRAS EASTLRV + V DA H
Sbjct: 284 SSKNIPNSVSGIFRASCDEASTLRVAVCVACNSDAMHLH 168
Score = 219 bits (474), Expect = 7e-057
Identities = 92/159 (57%), Positives = 111/159 (69%)
Frame = +3 / +3
Query: 99 MSRRSVRSEFNPDGNPQG*CLAKACSKDPRYIPWGVL*GDGPRRSWWDMGRTGQQQRFRS 278
M S+ + DG+PQG*CL AC KD R+ W V *GD P RS W MGRT RF S
Sbjct: 168 MQMHSIGITSDTDGHPQG*CLITACPKDTRHTVWDVF*GDQPCRSRWHMGRTC***RF*S 347
Query: 279 RRPQYSIEH*PLAHRWGRLLRLCGD*SFVMFQSKHRCSKDGGPLQ*LPGWRCWHLQPWIL 458
R Y+I++*P+ + W RL +CGD*S++MFQSKH S DGG L *LP CWHLQPW+L
Sbjct: 348 WRTPYAIKY*PMVYNWRRLFHICGD*SYIMFQSKHYRS*DGGSL**LPSQWCWHLQPWVL 527
Query: 459 GHEHRRWKDISSSYVC*VAKNHMLDSFADKL*WVAESGF 575
GHEHRRWKD+ SSYVC*++++ +DSF KL WVAES F
Sbjct: 528 GHEHRRWKDLQSSYVC*ISRSCRIDSFISKLRWVAESCF 644
Score = 196 bits (423), Expect = 8e-050
Identities = 89/147 (60%), Positives = 106/147 (72%)
Frame = -1 / -3
Query: 573 SQILQPIRACQRNCQACGFWRLNIHN*MICLSIFYVHAPESRVVNANTASRAVIAEDLHP 394
S+ILQPI AC NCQ C F NIHN*++ LSIFYVHAPE RVVNANT AVI E+LHP
Sbjct: 642 SKILQPIGAC**NCQFCSFC*FNIHN*IVGLSIFYVHAPEPRVVNANTTGWAVITENLHP 463
Query: 393 *SNDVSTET*RTISLHIDGGVVPNDEPGVNVRWSIGASCFETSVADQFCPYPTSSSVAHL 214
S++VSTET* TIS H G VV N P VN+ W + +S F+TS+ ++FCPY T S + L
Sbjct: 462 KSDNVSTET*CTISRHKYGRVVANYRPWVNI*WRMESSSFKTSITNKFCPYATGSCMVDL 283
Query: 213 LKEHPKECIGDLSSKLWRGINLEGYHL 133
LK+HPK+C+ LS KL GINLEG L
Sbjct: 282 LKKHPKQCVWYLSGKL**GINLEGGRL 202
Score = 183 bits (394), Expect = 8e-046
Identities = 92/144 (63%), Positives = 98/144 (68%)
Frame = +2 / +2
Query: 143 PSRLMPRQSLLERSPIHSLGCSLRRWATEELVGYGQNWSATEVSKQEAPILHRTLTPGSS 322
PSRLMP SL ER H LGC LRR +E V YGQN EV K E I H+ LT G
Sbjct: 212 PSRLMPHHSLPERYQTHCLGCFLRRSTMQEPVAYGQNLLVIEVLKLEDSIRHQILTHGL* 391
Query: 323 LGTTPPSMWRLIVRHVSVETSLL*GWRSSAMTARLAVLAFTTLDSGA*T*KMERHII*LC 502
L TT P +WRLIV HVSVET L GWR S MTA+ VLAFTTL SGA*T*KMER I*LC
Sbjct: 392 LATTLPYLWRLIVHHVSVETLSLLGWRFSVMTAQPVVLAFTTLGSGA*T*KMERPTI*LC 571
Query: 503 MLSRQKPHA*QFR*QALMGCRIWL 574
ML++QK *QF *QA MGCRI L
Sbjct: 572 MLNQQKLQN*QFH*QAPMGCRILL 643
Score = 113 bits (242), Expect(3) = 2e-039
Identities = 50/73 (68%), Positives = 53/73 (72%)
Frame = -3 / -2
Query: 574 KPDSATHQSLSAKLSSMWFLAT*HT*LDDMSFHLLCSCPRIQGCKCQHRQPGSHCRGPPS 395
K DSATH+SL KLS + L *HT*LD SFHLLCSCPR QGCKCQH GSH R PPS
Sbjct: 643 KQDSATHRSLLMKLSILQLLLI*HT*LDCRSFHLLCSCPRTQGCKCQHHWLGSHHREPPS 464
Query: 394 LEQRCFD*NMTND 356
E+ CFD*NM D
Sbjct: 463 *ER*CFD*NMMYD 425
Score = 66.9 bits (140), Expect(3) = 2e-039
Identities = 34/59 (57%), Positives = 39/59 (66%)
Frame = -3 / -2
Query: 310 GQCSMEYWGLLLRNLCC*PVLPISHQLLRGPSPQRTPQGMYRGSFEQALARHQP*GLPS 134
GQ M Y L L+NL * VLPI H+LL G SPQ+T Q + SF QA+ RHQP*G PS
Sbjct: 379 GQYLMAYGVLQLQNLYY*QVLPICHRLLHG*SPQKTSQTVCLVSFGQAVMRHQP*GWPS 203
Score = 21.6 bits (41), Expect(3) = 2e-039
Identities = 6/9 (66%), Positives = 8/9 (88%)
Frame = -3 / -2
Query: 31 WNPCASTCQ 5
WNP AS+C+
Sbjct: 115 WNPYASSCK 89
>gb|BF264487.2|BF264487 HV_CEa0009I22f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0009I22f, mRNA sequence
Length = 865
Score = 301 bits (652), Expect = 3e-081
Identities = 121/152 (79%), Positives = 135/152 (88%)
Frame = +1 / +1
Query: 121 LNSTQMVTLKVDASPKLARKIPDTFLGVFFEEMGHGGAGGIWAELVSNRGFEAGGPNTPS 300
L +TQ TLKVDAS +LARKIPDT G+FFEE+ H GAGGIWAELVSNRGFEAGG +TPS
Sbjct: 175 LQATQTATLKVDASSQLARKIPDTLFGMFFEEINHAGAGGIWAELVSNRGFEAGGLHTPS 354
Query: 301 NIDPWLIVGDDSSVYVETDRSSCFSRNIVALRMEVLCNDCPAGGVGIYNPGFWGMNIEDG 480
NIDPW I+GDDSS++V TDR+SCFSRNI+ALRMEVLC+DCPA GVGIYNPGFWGMNIEDG
Sbjct: 355 NIDPWSIIGDDSSIFVATDRTSCFSRNIIALRMEVLCDDCPASGVGIYNPGFWGMNIEDG 534
Query: 481 KTYHLVMYVKSPKTTCLTVSLTSSDGLQNLAS 576
KTY+LVMYVKS + LTVSL SSDG+QNLAS
Sbjct: 535 KTYNLVMYVKSAEAAELTVSLASSDGVQNLAS 630
Score = 232 bits (502), Expect = 1e-060
Identities = 106/159 (66%), Positives = 111/159 (69%)
Frame = -2 / -3
Query: 575 EARFCNPSELVSETVKHVVFGDLTYITR*YVFPSSMFMPQNPGL*MPTPPAGQSLQRTSI 396
EARFC PSEL +ETV DLTYITR VFPSSMFMPQNPGL*MPTP AGQS QRTSI
Sbjct: 629 EARFCTPSELANETVNSAASADLTYITRL*VFPSSMFMPQNPGL*MPTPLAGQSSQRTSI 450
Query: 395 LRATMFRLKHDXXXXXXXXXXXXXXXSQGSMFDGVLGPPASKPLLLTSSAHIPPAPPWPI 216
LRA MFRLKHD GS+FDGV PPASKPLLLTSSAH+PPAP W I
Sbjct: 449 LRAIMFRLKHDVRSVATNMEESSPIIDHGSIFDGVWSPPASKPLLLTSSAHMPPAPAWLI 270
Query: 215 SSKNTPRNVSGIFRASFGEASTLRVTIWVEFRPDAPPRH 99
SSKN P +VSGIFRAS EASTLRV + V A H
Sbjct: 269 SSKNIPNSVSGIFRASCDEASTLRVAVCVACNSHAMHLH 153
Score = 215 bits (465), Expect = 1e-055
Identities = 91/159 (57%), Positives = 110/159 (69%)
Frame = +3 / +3
Query: 99 MSRRSVRSEFNPDGNPQG*CLAKACSKDPRYIPWGVL*GDGPRRSWWDMGRTGQQQRFRS 278
M S+ + DG+PQG*CL AC KD R+ W V *GD P RS W MGRT RF S
Sbjct: 153 MQMHSMGITSDTDGHPQG*CLITACPKDTRHTVWDVF*GDQPCRSRWHMGRTC***RF*S 332
Query: 279 RRPQYSIEH*PLAHRWGRLLRLCGD*SFVMFQSKHRCSKDGGPLQ*LPGWRCWHLQPWIL 458
R Y+I++*P+ + W RL +CGD*S++MFQSKH S DGG L *LP CWHLQPW+L
Sbjct: 333 WRTPYAIKY*PMVYNWRRLFHICGD*SYIMFQSKHYRS*DGGSL**LPSQWCWHLQPWVL 512
Query: 459 GHEHRRWKDISSSYVC*VAKNHMLDSFADKL*WVAESGF 575
GHEHRRWKD+ SSYVC*++++ +DSF KL W AES F
Sbjct: 513 GHEHRRWKDLQSSYVC*ISRSCRIDSFISKLRWGAESCF 629
Score = 194 bits (418), Expect = 4e-049
Identities = 88/147 (59%), Positives = 105/147 (71%)
Frame = -1 / -2
Query: 573 SQILQPIRACQRNCQACGFWRLNIHN*MICLSIFYVHAPESRVVNANTASRAVIAEDLHP 394
S+IL PI AC NCQ C F NIHN*++ LSIFYVHAPE RVVNANT AVI E+LHP
Sbjct: 627 SKILHPIGAC**NCQFCSFC*FNIHN*IVGLSIFYVHAPEPRVVNANTTGWAVITENLHP 448
Query: 393 *SNDVSTET*RTISLHIDGGVVPNDEPGVNVRWSIGASCFETSVADQFCPYPTSSSVAHL 214
S++VSTET* TIS H G VV N P VN+ W + +S F+TS+ ++FCPY T S + L
Sbjct: 447 KSDNVSTET*CTISRHKYGRVVANYRPWVNI*WRMESSSFKTSITNKFCPYATGSCMVDL 268
Query: 213 LKEHPKECIGDLSSKLWRGINLEGYHL 133
LK+HPK+C+ LS KL GINLEG L
Sbjct: 267 LKKHPKQCVWYLSGKL**GINLEGGRL 187
Score = 183 bits (394), Expect = 8e-046
Identities = 92/144 (63%), Positives = 98/144 (68%)
Frame = +2 / +2
Query: 143 PSRLMPRQSLLERSPIHSLGCSLRRWATEELVGYGQNWSATEVSKQEAPILHRTLTPGSS 322
PSRLMP SL ER H LGC LRR +E V YGQN EV K E I H+ LT G
Sbjct: 197 PSRLMPHHSLPERYQTHCLGCFLRRSTMQEPVAYGQNLLVIEVLKLEDSIRHQILTHGL* 376
Query: 323 LGTTPPSMWRLIVRHVSVETSLL*GWRSSAMTARLAVLAFTTLDSGA*T*KMERHII*LC 502
L TT P +WRLIV HVSVET L GWR S MTA+ VLAFTTL SGA*T*KMER I*LC
Sbjct: 377 LATTLPYLWRLIVHHVSVETLSLLGWRFSVMTAQPVVLAFTTLGSGA*T*KMERPTI*LC 556
Query: 503 MLSRQKPHA*QFR*QALMGCRIWL 574
ML++QK *QF *QA MGCRI L
Sbjct: 557 MLNQQKLQN*QFH*QAPMGCRILL 628
Score = 110 bits (236), Expect(3) = 2e-038
Identities = 49/73 (67%), Positives = 52/73 (71%)
Frame = -3 / -1
Query: 574 KPDSATHQSLSAKLSSMWFLAT*HT*LDDMSFHLLCSCPRIQGCKCQHRQPGSHCRGPPS 395
K DSA H+SL KLS + L *HT*LD SFHLLCSCPR QGCKCQH GSH R PPS
Sbjct: 628 KQDSAPHRSLLMKLSILQLLLI*HT*LDCRSFHLLCSCPRTQGCKCQHHWLGSHHREPPS 449
Query: 394 LEQRCFD*NMTND 356
E+ CFD*NM D
Sbjct: 448 *ER*CFD*NMMYD 410
Score = 66.9 bits (140), Expect(3) = 2e-038
Identities = 34/59 (57%), Positives = 39/59 (66%)
Frame = -3 / -1
Query: 310 GQCSMEYWGLLLRNLCC*PVLPISHQLLRGPSPQRTPQGMYRGSFEQALARHQP*GLPS 134
GQ M Y L L+NL * VLPI H+LL G SPQ+T Q + SF QA+ RHQP*G PS
Sbjct: 364 GQYLMAYGVLQLQNLYY*QVLPICHRLLHG*SPQKTSQTVCLVSFGQAVMRHQP*GWPS 188
Score = 21.6 bits (41), Expect(3) = 2e-038
Identities = 6/9 (66%), Positives = 8/9 (88%)
Frame = -3 / -1
Query: 31 WNPCASTCQ 5
WNP AS+C+
Sbjct: 100 WNPYASSCK 74
>gb|CA009590.1|CA009590 HU14I23r HU Hordeum vulgare subsp. vulgare cDNA clone HU14I23
5-PRIME, mRNA sequence
Length = 598
Score = 298 bits (646), Expect = 2e-080
Identities = 120/155 (77%), Positives = 137/155 (88%)
Frame = +1 / +3
Query: 112 ASGLNSTQMVTLKVDASPKLARKIPDTFLGVFFEEMGHGGAGGIWAELVSNRGFEAGGPN 291
AS TQ+ +L VD+SP LARKIPDT G+FFEE+ H GAGGIWAELVSNRGFEAGGP+
Sbjct: 123 ASEFEITQVASLGVDSSPHLARKIPDTLFGIFFEEINHAGAGGIWAELVSNRGFEAGGPH 302
Query: 292 TPSNIDPWLIVGDDSSVYVETDRSSCFSRNIVALRMEVLCNDCPAGGVGIYNPGFWGMNI 471
TPSNI+PW I+GDDSS++V TDR+SCFSRN VALRMEVLC++CP GGVGIYNPGFWGMNI
Sbjct: 303 TPSNINPWSIIGDDSSIFVGTDRTSCFSRNKVALRMEVLCDNCPVGGVGIYNPGFWGMNI 482
Query: 472 EDGKTYHLVMYVKSPKTTCLTVSLTSSDGLQNLAS 576
EDGKTY+LVM+VKSP+T +TVSLTSSDGLQ LAS
Sbjct: 483 EDGKTYNLVMHVKSPETIEMTVSLTSSDGLQVLAS 587
Score = 233 bits (503), Expect = 7e-061
Identities = 105/155 (67%), Positives = 112/155 (72%)
Frame = -2 / -1
Query: 575 EARFCNPSELVSETVKHVVFGDLTYITR*YVFPSSMFMPQNPGL*MPTPPAGQSLQRTSI 396
EA+ C+PSELVSETV +V GDLT ITR VFPSSMFMPQNPGL*MPTPP GQ QRTSI
Sbjct: 586 EAKTCSPSELVSETVISIVSGDLTCITRL*VFPSSMFMPQNPGL*MPTPPTGQLSQRTSI 407
Query: 395 LRATMFRLKHDXXXXXXXXXXXXXXXSQGSMFDGVLGPPASKPLLLTSSAHIPPAPPWPI 216
LRAT+FRLKHD G +FDGV GPPASKPLLLTSSAHIPPAP W I
Sbjct: 406 LRATLFRLKHDVRSVPTNMEESSPMMDHGLIFDGVWGPPASKPLLLTSSAHIPPAPAWLI 227
Query: 215 SSKNTPRNVSGIFRASFGEASTLRVTIWVEFRPDA 111
SSKN P +VSGIFRA GE ST R+ WV DA
Sbjct: 226 SSKNIPNSVSGIFRARCGEESTPRLATWVISNSDA 122
Score = 215 bits (464), Expect = 2e-055
Identities = 87/149 (58%), Positives = 102/149 (68%)
Frame = +3 / +2
Query: 129 NPDGNPQG*CLAKACSKDPRYIPWGVL*GDGPRRSWWDMGRTGQQQRFRSRRPQYSIEH* 308
+P G P * L CSKDP Y W +L*GD P RSWW+MGRT RF SRRP YSI++*
Sbjct: 140 HPSGKPWC*FLTAPCSKDP*YAVWNIL*GDQPCRSWWNMGRTC***RF*SRRPPYSIKY* 319
Query: 309 PLAHRWGRLLRLCGD*SFVMFQSKHRCSKDGGPLQ*LPGWRCWHLQPWILGHEHRRWKDI 488
+ H W L +CG+ +VMFQSK CSK+GG L *LP WRCWHLQPW+LGHEHRRW+D+
Sbjct: 320 SMVHHWR*LFHICGNRPYVMFQSKQGCSKNGGSL**LPSWRCWHLQPWVLGHEHRRWEDL 499
Query: 489 SSSYVC*VAKNHMLDSFADKL*WVAESGF 575
SSY C V +N DSF +KL* GF
Sbjct: 500 QSSYACQVTRNDRNDSFTNKL*RATSFGF 586
Score = 201 bits (434), Expect = 2e-051
Identities = 90/150 (60%), Positives = 112/150 (74%)
Frame = -1 / -3
Query: 579 T*SQILQPIRACQRNCQACGFWRLNIHN*MICLSIFYVHAPESRVVNANTASRAVIAEDL 400
+*SQ L P+RAC NC FW L++HN*++ L IFYVHAPE RVVNANTA+ AVI E+L
Sbjct: 590 S*SQNL*PVRAC**NCHFYRFW*LDMHN*IVGLPIFYVHAPEPRVVNANTANWAVITENL 411
Query: 399 HP*SNDVSTET*RTISLHIDGGVVPNDEPGVNVRWSIGASCFETSVADQFCPYPTSSSVA 220
H *SN VSTET*RT+ H G V+ ND P +N+ WS+GASCF+TS+ ++FCPY TSS +
Sbjct: 410 HS*SNLVSTET*RTVCSHKYGRVISNDGPWINI*WSMGASCFKTSITNKFCPYSTSSCMV 231
Query: 219 HLLKEHPKECIGDLSSKLWRGINLEGYHLG 130
LLKE+ K+ I DLSSK+ GIN + HLG
Sbjct: 230 DLLKEYSKQRIRDLSSKVR*GINTKACHLG 141
Score = 182 bits (393), Expect = 1e-045
Identities = 92/150 (61%), Positives = 103/150 (68%)
Frame = +2 / +1
Query: 131 PRW*PSRLMPRQSLLERSPIHSLGCSLRRWATEELVGYGQNWSATEVSKQEAPILHRTLT 310
P+W L+P ++LLERS I L SLRR +ELV YGQN EV KQEAPILH+ L
Sbjct: 142 PKWQALVLIPHRTLLERSLIRCLEYSLRRSTMQELVEYGQNLLVIEVLKQEAPILHQILI 321
Query: 311 PGSSLGTTPPSMWRLIVRHVSVETSLL*GWRSSAMTARLAVLAFTTLDSGA*T*KMERHI 490
G SL T P +W VRHVSVET LL* WR S +TA+LAVLAFTTL SGA*T*KM R
Sbjct: 322 HGPSLEMTLPYLWEQTVRHVSVETRLL*EWRFSVITAQLAVLAFTTLGSGA*T*KMGRPT 501
Query: 491 I*LCMLSRQKPHA*QFR*QALMGCRIWLQV 580
I*LCM S QK *QF *QAL G + WLQ+
Sbjct: 502 I*LCMSSHQKR*K*QFH*QALTGYKFWLQL 591
Score = 114 bits (244), Expect(2) = 1e-041
Identities = 50/72 (69%), Positives = 52/72 (72%)
Frame = -3 / -2
Query: 577 LKPDSATHQSLSAKLSSMWFLAT*HT*LDDMSFHLLCSCPRIQGCKCQHRQPGSHCRGPP 398
LKP QSL KLS + FL T*H *LD S HLLCSCPR QGCKCQHRQ GS+ R PP
Sbjct: 588 LKPKLVARQSLLVKLSFLSFLVT*HA*LDCRSSHLLCSCPRTQGCKCQHRQLGSYHREPP 409
Query: 397 SLEQRCFD*NMT 362
LEQ CFD*NMT
Sbjct: 408 FLEQPCFD*NMT 373
Score = 74.7 bits (157), Expect(2) = 1e-041
Identities = 36/56 (64%), Positives = 39/56 (69%)
Frame = -3 / -2
Query: 298 MEYWGLLLRNLCC*PVLPISHQLLRGPSPQRTPQGMYRGSFEQALARHQP*GLPSG 131
MEY GLLL+NL * VLPI HQLL G SPQR Q Y+GSFEQ R+Q GLP G
Sbjct: 309 MEYGGLLLQNLYY*QVLPIFHQLLHG*SPQRIFQTAYQGSFEQGAVRNQHQGLPLG 142
>gb|CA024621.1|CA024621 HZ49N06r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ49N06
5-PRIME, mRNA sequence
Length = 598
Score = 280 bits (606), Expect = 6e-075
Identities = 112/142 (78%), Positives = 125/142 (88%)
Frame = +1 / +3
Query: 112 ASGLNSTQMVTLKVDASPKLARKIPDTFLGVFFEEMGHGGAGGIWAELVSNRGFEAGGPN 291
AS L +TQ TLKVDAS +LARKIPDT G+FFEE+ H GAGGIWAELVSNRGFEAGG +
Sbjct: 171 ASELQATQTATLKVDASSQLARKIPDTLFGMFFEEINHAGAGGIWAELVSNRGFEAGGLH 350
Query: 292 TPSNIDPWLIVGDDSSVYVETDRSSCFSRNIVALRMEVLCNDCPAGGVGIYNPGFWGMNI 471
TPSNIDPW I+GDDSS++V TDR+SCFSRNI+ALRMEVLC+DCPA GVGIYNPGFWGMNI
Sbjct: 351 TPSNIDPWSIIGDDSSIFVATDRTSCFSRNIIALRMEVLCDDCPASGVGIYNPGFWGMNI 530
Query: 472 EDGKTYHLVMYVKSPKTTCLTV 537
EDGKTY+LVMYVKS + LTV
Sbjct: 531 EDGKTYNLVMYVKSAEAAELTV 596
Score = 212 bits (459), Expect = 9e-055
Identities = 98/147 (66%), Positives = 102/147 (69%)
Frame = -2 / -1
Query: 539 ETVKHVVFGDLTYITR*YVFPSSMFMPQNPGL*MPTPPAGQSLQRTSILRATMFRLKHDX 360
ETV DLTYITR VFPSSMFMPQNPGL*MPTP AGQS QRTSILRA MFRLKHD
Sbjct: 598 ETVNSAASADLTYITRL*VFPSSMFMPQNPGL*MPTPLAGQSSQRTSILRAIMFRLKHDV 419
Query: 359 XXXXXXXXXXXXXXSQGSMFDGVLGPPASKPLLLTSSAHIPPAPPWPISSKNTPRNVSGI 180
GS+FDGV PPASKPLLLTSSAH+PPAP W ISSKN P +VSGI
Sbjct: 418 RSVATNMEESSPIIDHGSIFDGVWSPPASKPLLLTSSAHMPPAPAWLISSKNIPNSVSGI 239
Query: 179 FRASFGEASTLRVTIWVEFRPDAPPRH 99
FRAS EASTLRV + V DA H
Sbjct: 238 FRASCDEASTLRVAVCVACNSDAMHLH 158
Score = 203 bits (439), Expect = 5e-052
Identities = 84/147 (57%), Positives = 103/147 (70%)
Frame = +3 / +2
Query: 99 MSRRSVRSEFNPDGNPQG*CLAKACSKDPRYIPWGVL*GDGPRRSWWDMGRTGQQQRFRS 278
M S+ + DG+PQG*CL AC KD R+ W V *GD P RS W MGRT RF S
Sbjct: 158 MQMHSIGITSDTDGHPQG*CLITACPKDTRHTVWDVF*GDQPCRSRWHMGRTC***RF*S 337
Query: 279 RRPQYSIEH*PLAHRWGRLLRLCGD*SFVMFQSKHRCSKDGGPLQ*LPGWRCWHLQPWIL 458
R Y+I++*P+ + W RL +CGD*S++MFQSKH S DGG L *LP CWHLQPW+L
Sbjct: 338 WRTPYAIKY*PMVYNWRRLFHICGD*SYIMFQSKHYRS*DGGSL**LPSQWCWHLQPWVL 517
Query: 459 GHEHRRWKDISSSYVC*VAKNHMLDSF 539
GHEHRRWKD+ SSYVC*++++ +DSF
Sbjct: 518 GHEHRRWKDLQSSYVC*ISRSCRIDSF 598
Score = 181 bits (391), Expect = 2e-045
Identities = 81/135 (60%), Positives = 97/135 (71%)
Frame = -1 / -3
Query: 537 NCQACGFWRLNIHN*MICLSIFYVHAPESRVVNANTASRAVIAEDLHP*SNDVSTET*RT 358
NCQ C F NIHN*++ LSIFYVHAPE RVVNANT AVI E+LHP S++VSTET* T
Sbjct: 596 NCQFCSFC*FNIHN*IVGLSIFYVHAPEPRVVNANTTGWAVITENLHPKSDNVSTET*CT 417
Query: 357 ISLHIDGGVVPNDEPGVNVRWSIGASCFETSVADQFCPYPTSSSVAHLLKEHPKECIGDL 178
IS H G VV N P VN+ W + +S F+TS+ ++FCPY T S + LLK+HPK+C+ L
Sbjct: 416 ISRHKYGRVVANYRPWVNI*WRMESSSFKTSITNKFCPYATGSCMVDLLKKHPKQCVWYL 237
Query: 177 SSKLWRGINLEGYHL 133
S KL GINLEG L
Sbjct: 236 SGKL**GINLEGGRL 192
Score = 165 bits (356), Expect = 1e-040
Identities = 83/132 (62%), Positives = 89/132 (67%)
Frame = +2 / +1
Query: 143 PSRLMPRQSLLERSPIHSLGCSLRRWATEELVGYGQNWSATEVSKQEAPILHRTLTPGSS 322
PSRLMP SL ER H LGC LRR +E V YGQN EV K E I H+ LT G
Sbjct: 202 PSRLMPHHSLPERYQTHCLGCFLRRSTMQEPVAYGQNLLVIEVLKLEDSIRHQILTHGL* 381
Query: 323 LGTTPPSMWRLIVRHVSVETSLL*GWRSSAMTARLAVLAFTTLDSGA*T*KMERHII*LC 502
L TT P +WRLIV HVSVET L GWR S MTA+ VLAFTTL SGA*T*KMER I*LC
Sbjct: 382 LATTLPYLWRLIVHHVSVETLSLLGWRFSVMTAQPVVLAFTTLGSGA*T*KMERPTI*LC 561
Query: 503 MLSRQKPHA*QF 538
ML++QK *QF
Sbjct: 562 MLNQQKLQN*QF 597
Score = 96.7 bits (205), Expect(3) = 2e-034
Identities = 42/61 (68%), Positives = 44/61 (72%)
Frame = -3 / -2
Query: 538 KLSSMWFLAT*HT*LDDMSFHLLCSCPRIQGCKCQHRQPGSHCRGPPSLEQRCFD*NMTN 359
KLS + L *HT*LD SFHLLCSCPR QGCKCQH GSH R PPS E+ CFD*NM
Sbjct: 597 KLSILQLLLI*HT*LDCRSFHLLCSCPRTQGCKCQHHWLGSHHREPPS*ER*CFD*NMMY 418
Query: 358 D 356
D
Sbjct: 417 D 415
Score = 66.9 bits (140), Expect(3) = 2e-034
Identities = 34/59 (57%), Positives = 39/59 (66%)
Frame = -3 / -2
Query: 310 GQCSMEYWGLLLRNLCC*PVLPISHQLLRGPSPQRTPQGMYRGSFEQALARHQP*GLPS 134
GQ M Y L L+NL * VLPI H+LL G SPQ+T Q + SF QA+ RHQP*G PS
Sbjct: 369 GQYLMAYGVLQLQNLYY*QVLPICHRLLHG*SPQKTSQTVCLVSFGQAVMRHQP*GWPS 193
Score = 21.6 bits (41), Expect(3) = 2e-034
Identities = 6/9 (66%), Positives = 8/9 (88%)
Frame = -3 / -2
Query: 31 WNPCASTCQ 5
WNP AS+C+
Sbjct: 105 WNPYASSCK 79
>gb|CA029603.1|CA029603 HZ65L02r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ65L02
5-PRIME, mRNA sequence
Length = 598
Score = 280 bits (606), Expect = 6e-075
Identities = 112/142 (78%), Positives = 125/142 (88%)
Frame = +1 / +3
Query: 112 ASGLNSTQMVTLKVDASPKLARKIPDTFLGVFFEEMGHGGAGGIWAELVSNRGFEAGGPN 291
AS L +TQ TLKVDAS +LARKIPDT G+FFEE+ H GAGGIWAELVSNRGFEAGG +
Sbjct: 171 ASELQATQTATLKVDASSQLARKIPDTLFGMFFEEINHAGAGGIWAELVSNRGFEAGGLH 350
Query: 292 TPSNIDPWLIVGDDSSVYVETDRSSCFSRNIVALRMEVLCNDCPAGGVGIYNPGFWGMNI 471
TPSNIDPW I+GDDSS++V TDR+SCFSRNI+ALRMEVLC+DCPA GVGIYNPGFWGMNI
Sbjct: 351 TPSNIDPWSIIGDDSSIFVATDRTSCFSRNIIALRMEVLCDDCPASGVGIYNPGFWGMNI 530
Query: 472 EDGKTYHLVMYVKSPKTTCLTV 537
EDGKTY+LVMYVKS + LTV
Sbjct: 531 EDGKTYNLVMYVKSAEAAELTV 596
Score = 212 bits (459), Expect = 9e-055
Identities = 98/147 (66%), Positives = 102/147 (69%)
Frame = -2 / -1
Query: 539 ETVKHVVFGDLTYITR*YVFPSSMFMPQNPGL*MPTPPAGQSLQRTSILRATMFRLKHDX 360
ETV DLTYITR VFPSSMFMPQNPGL*MPTP AGQS QRTSILRA MFRLKHD
Sbjct: 598 ETVNSAASADLTYITRL*VFPSSMFMPQNPGL*MPTPLAGQSSQRTSILRAIMFRLKHDV 419
Query: 359 XXXXXXXXXXXXXXSQGSMFDGVLGPPASKPLLLTSSAHIPPAPPWPISSKNTPRNVSGI 180
GS+FDGV PPASKPLLLTSSAH+PPAP W ISSKN P +VSGI
Sbjct: 418 RSVATNMEESSPIIDHGSIFDGVWSPPASKPLLLTSSAHMPPAPAWLISSKNIPNSVSGI 239
Query: 179 FRASFGEASTLRVTIWVEFRPDAPPRH 99
FRAS EASTLRV + V DA H
Sbjct: 238 FRASCDEASTLRVAVCVACNSDAMHLH 158
Score = 203 bits (439), Expect = 5e-052
Identities = 84/147 (57%), Positives = 103/147 (70%)
Frame = +3 / +2
Query: 99 MSRRSVRSEFNPDGNPQG*CLAKACSKDPRYIPWGVL*GDGPRRSWWDMGRTGQQQRFRS 278
M S+ + DG+PQG*CL AC KD R+ W V *GD P RS W MGRT RF S
Sbjct: 158 MQMHSIGITSDTDGHPQG*CLITACPKDTRHTVWDVF*GDQPCRSRWHMGRTC***RF*S 337
Query: 279 RRPQYSIEH*PLAHRWGRLLRLCGD*SFVMFQSKHRCSKDGGPLQ*LPGWRCWHLQPWIL 458
R Y+I++*P+ + W RL +CGD*S++MFQSKH S DGG L *LP CWHLQPW+L
Sbjct: 338 WRTPYAIKY*PMVYNWRRLFHICGD*SYIMFQSKHYRS*DGGSL**LPSQWCWHLQPWVL 517
Query: 459 GHEHRRWKDISSSYVC*VAKNHMLDSF 539
GHEHRRWKD+ SSYVC*++++ +DSF
Sbjct: 518 GHEHRRWKDLQSSYVC*ISRSCRIDSF 598
Score = 181 bits (391), Expect = 2e-045
Identities = 81/135 (60%), Positives = 97/135 (71%)
Frame = -1 / -3
Query: 537 NCQACGFWRLNIHN*MICLSIFYVHAPESRVVNANTASRAVIAEDLHP*SNDVSTET*RT 358
NCQ C F NIHN*++ LSIFYVHAPE RVVNANT AVI E+LHP S++VSTET* T
Sbjct: 596 NCQFCSFC*FNIHN*IVGLSIFYVHAPEPRVVNANTTGWAVITENLHPKSDNVSTET*CT 417
Query: 357 ISLHIDGGVVPNDEPGVNVRWSIGASCFETSVADQFCPYPTSSSVAHLLKEHPKECIGDL 178
IS H G VV N P VN+ W + +S F+TS+ ++FCPY T S + LLK+HPK+C+ L
Sbjct: 416 ISRHKYGRVVANYRPWVNI*WRMESSSFKTSITNKFCPYATGSCMVDLLKKHPKQCVWYL 237
Query: 177 SSKLWRGINLEGYHL 133
S KL GINLEG L
Sbjct: 236 SGKL**GINLEGGRL 192
Score = 165 bits (356), Expect = 1e-040
Identities = 83/132 (62%), Positives = 89/132 (67%)
Frame = +2 / +1
Query: 143 PSRLMPRQSLLERSPIHSLGCSLRRWATEELVGYGQNWSATEVSKQEAPILHRTLTPGSS 322
PSRLMP SL ER H LGC LRR +E V YGQN EV K E I H+ LT G
Sbjct: 202 PSRLMPHHSLPERYQTHCLGCFLRRSTMQEPVAYGQNLLVIEVLKLEDSIRHQILTHGL* 381
Query: 323 LGTTPPSMWRLIVRHVSVETSLL*GWRSSAMTARLAVLAFTTLDSGA*T*KMERHII*LC 502
L TT P +WRLIV HVSVET L GWR S MTA+ VLAFTTL SGA*T*KMER I*LC
Sbjct: 382 LATTLPYLWRLIVHHVSVETLSLLGWRFSVMTAQPVVLAFTTLGSGA*T*KMERPTI*LC 561
Query: 503 MLSRQKPHA*QF 538
ML++QK *QF
Sbjct: 562 MLNQQKLQN*QF 597
Score = 96.7 bits (205), Expect(3) = 2e-034
Identities = 42/61 (68%), Positives = 44/61 (72%)
Frame = -3 / -2
Query: 538 KLSSMWFLAT*HT*LDDMSFHLLCSCPRIQGCKCQHRQPGSHCRGPPSLEQRCFD*NMTN 359
KLS + L *HT*LD SFHLLCSCPR QGCKCQH GSH R PPS E+ CFD*NM
Sbjct: 597 KLSILQLLLI*HT*LDCRSFHLLCSCPRTQGCKCQHHWLGSHHREPPS*ER*CFD*NMMY 418
Query: 358 D 356
D
Sbjct: 417 D 415
Score = 66.9 bits (140), Expect(3) = 2e-034
Identities = 34/59 (57%), Positives = 39/59 (66%)
Frame = -3 / -2
Query: 310 GQCSMEYWGLLLRNLCC*PVLPISHQLLRGPSPQRTPQGMYRGSFEQALARHQP*GLPS 134
GQ M Y L L+NL * VLPI H+LL G SPQ+T Q + SF QA+ RHQP*G PS
Sbjct: 369 GQYLMAYGVLQLQNLYY*QVLPICHRLLHG*SPQKTSQTVCLVSFGQAVMRHQP*GWPS 193
Score = 21.6 bits (41), Expect(3) = 2e-034
Identities = 6/9 (66%), Positives = 8/9 (88%)
Frame = -3 / -2
Query: 31 WNPCASTCQ 5
WNP AS+C+
Sbjct: 105 WNPYASSCK 79
>gb|CA029433.1|CA029433 HZ65D06r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ65D06
5-PRIME, mRNA sequence
Length = 642
Score = 215 bits (464), Expect = 2e-055
Identities = 82/109 (75%), Positives = 100/109 (91%)
Frame = +1 / +3
Query: 250 ELVSNRGFEAGGPNTPSNIDPWLIVGDDSSVYVETDRSSCFSRNIVALRMEVLCNDCPAG 429
ELVSN+GFEAGGP+TPSNIDPW I+GD+SS+YV+T+R+SCFSRNIVALRME+LC CPAG
Sbjct: 3 ELVSNKGFEAGGPHTPSNIDPWSIIGDESSIYVKTERTSCFSRNIVALRMEILCAKCPAG 182
Query: 430 GVGIYNPGFWGMNIEDGKTYHLVMYVKSPKTTCLTVSLTSSDGLQNLAS 576
GVGIYNPGFWGMNIE+GK+Y+LVMY++S ++ L SLT SDGLQN+A+
Sbjct: 183 GVGIYNPGFWGMNIEEGKSYNLVMYIRSLESVELAASLTCSDGLQNIAT 329
Score = 141 bits (303), Expect = 3e-033
Identities = 66/108 (61%), Positives = 71/108 (65%)
Frame = -2 / -3
Query: 572 ARFCNPSELVSETVKHVVFGDLTYITR*YVFPSSMFMPQNPGL*MPTPPAGQSLQRTSIL 393
A FC+PSE VSE DL YITR +FPSSMFMPQNPGL*+PTPPAG QR SIL
Sbjct: 325 AIFCSPSEHVSEAANSTDSSDLIYITRL*LFPSSMFMPQNPGL*IPTPPAGHLAQRISIL 146
Query: 392 RATMFRLKHDXXXXXXXXXXXXXXXSQGSMFDGVLGPPASKPLLLTSS 249
RAT+F LK D GSMF+GV GPPASKPLLLTSS
Sbjct: 145 RATIFLLKQDVLSVFTYMEDSSPMIDHGSMFEGV*GPPASKPLLLTSS 2
Score = 102 bits (218), Expect = 2e-021
Identities = 52/105 (49%), Positives = 66/105 (62%)
Frame = -1 / -2
Query: 567 ILQPIRACQRNCQACGFWRLNIHN*MICLSIFYVHAPESRVVNANTASRAVIAEDLHP*S 388
ILQ I C+ + GF +IH +I L FYVHAPES VVN NTAS + ++ HP*S
Sbjct: 320 ILQSI*TCE*SS*LHGF**SDIHYQIIALPFFYVHAPESWVVNTNTASWTLGTKNFHP*S 141
Query: 387 NDVSTET*RTISLHIDGGVVPNDEPGVNVRWSIGASCFETSVADQ 253
ND+STET + SLH+ GG V ND P + V S+ S F+T V D+
Sbjct: 140 NDISTETRCSFSLHVYGGFVTNDRPWIYV*RSVRPSGFKTFVTDK 6
Score = 102 bits (218), Expect = 2e-021
Identities = 44/103 (42%), Positives = 62/103 (60%)
Frame = +3 / +2
Query: 258 QQQRFRSRRPQYSIEH*PLAHRWGRLLRLCGD*SFVMFQSKHRCSKDGGPLQ*LPGWRCW 437
Q QRF SRR +S +H + + W R+L + D* ++FQ K+RCSKDG L + WRCW
Sbjct: 11 Q*QRF*SRRASHSFKHRSMVYHW*RILHIRED*KNILFQ*KYRCSKDGNSLCQVSSWRCW 190
Query: 438 HLQPWILGHEHRRWKDISSSYVC*VAKNHMLDSFADKL*WVAE 566
+LQP ILGHEHRR +++ S V + + + F W A+
Sbjct: 191 YLQPRILGHEHRRREEL*SGNVYQITRIRGVSCFTHMFRWTAK 319
>gb|BU979580.1|BU979580 HA16J20r HA Hordeum vulgare subsp. vulgare cDNA clone HA16J20
5-PRIME, mRNA sequence
Length = 372
Score = 211 bits (456), Expect = 3e-054
Identities = 80/106 (75%), Positives = 93/106 (87%)
Frame = +1 / +2
Query: 166 KLARKIPDTFLGVFFEEMGHGGAGGIWAELVSNRGFEAGGPNTPSNIDPWLIVGDDSSVY 345
K ARKIP T G+ EE+ H GAGG+WAELVSN+GFEAGGP+TPSNIDPW I+GD+SS+Y
Sbjct: 53 KAARKIPQTLFGLXXEEINHAGAGGLWAELVSNKGFEAGGPDTPSNIDPWSIIGDESSIY 232
Query: 346 VETDRSSCFSRNIVALRMEVLCNDCPAGGVGIYNPGFWGMNIEDGK 483
V+T+R+S SRNIVALRME+LC CPAGGVGIYNPGFWGMNIE+GK
Sbjct: 233 VKTERTSXXSRNIVALRMEILCAKCPAGGVGIYNPGFWGMNIEEGK 370
Score = 153 bits (329), Expect = 7e-037
Identities = 68/107 (63%), Positives = 74/107 (69%)
Frame = -2 / -1
Query: 485 VFPSSMFMPQNPGL*MPTPPAGQSLQRTSILRATMFRLKHDXXXXXXXXXXXXXXXSQGS 306
+FPSSMFMPQNPGL*+PTPPAG QR SILRAT+F L D GS
Sbjct: 372 LFPSSMFMPQNPGL*IPTPPAGHLAQRISILRATIFLLXXDVLSVFTYMEDSSPMIDHGS 193
Query: 305 MFDGVLGPPASKPLLLTSSAHIPPAPPWPISSKNTPRNVSGIFRASF 165
MF+GV GPPASKPLLLTSSAH PPAP W ISSK P+ V GIF A+F
Sbjct: 192 MFEGVSGPPASKPLLLTSSAHNPPAPAWLISSKXKPKRV*GIFLAAF 52
Score = 116 bits (249), Expect = 8e-026
Identities = 51/100 (51%), Positives = 62/100 (62%)
Frame = +3 / +1
Query: 177 KDPRYIPWGVL*GDGPRRSWWDMGRTGQQQRFRSRRPQYSIEH*PLAHRWGRLLRLCGD* 356
KDP W L G+ PR SWW MG Q QRF SRR +S +H + + W R+L + D*
Sbjct: 64 KDPSNPLWLXLXGNQPRWSWWIMGGACQ*QRF*SRRA*HSFKHRSMVYHW*RILHIRED* 243
Query: 357 SFVMFQSKHRCSKDGGPLQ*LPGWRCWHLQPWILGHEHRR 476
+ Q K+RCSKDG L + WRCW+LQP ILGHEHRR
Sbjct: 244 KNIXXQ*KYRCSKDGNSLCQVSSWRCWYLQPRILGHEHRR 363
Score = 105 bits (225), Expect = 2e-022
Identities = 53/106 (50%), Positives = 64/106 (60%)
Frame = -1 / -3
Query: 483 LSIFYVHAPESRVVNANTASRAVIAEDLHP*SNDVSTET*RTISLHIDGGVVPNDEPGVN 304
L FYVHAPES VVN NTAS + ++ HP*SND+ST + SLH+ GG V ND P +
Sbjct: 370 LPFFYVHAPESWVVNTNTASWTLGTKNFHP*SNDISTAXRCSFSLHVYGGFVTNDRPWIY 191
Query: 303 VRWSIGASCFETSVADQFCPYPTSSSVAHLLKEHPKECIGDLSSKL 166
V S+ S F+T V D+ P TSSSV L KE + DLS L
Sbjct: 190 V*RSVRPSGFKTFVTDKLRP*STSSSVVDFLXXQAKEGLRDLSGGL 53
>gb|CA029014.1|CA029014 HZ63P04r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ63P04
5-PRIME, mRNA sequence
Length = 379
Score = 186 bits (402), Expect(2) = 1e-050
Identities = 71/98 (72%), Positives = 88/98 (89%)
Frame = +1 / +1
Query: 283 GPNTPSNIDPWLIVGDDSSVYVETDRSSCFSRNIVALRMEVLCNDCPAGGVGIYNPGFWG 462
G +TPSNIDPW I+GD+SS+YV+T+R+SCFSRNIVALRME+LC CPAGGVGIYNPGFWG
Sbjct: 37 GLHTPSNIDPWSIIGDESSIYVKTERTSCFSRNIVALRMEILCAKCPAGGVGIYNPGFWG 216
Query: 463 MNIEDGKTYHLVMYVKSPKTTCLTVSLTSSDGLQNLAS 576
MNIE+GK+Y+LVMY++S ++ L SLT SDGLQN+A+
Sbjct: 217 MNIEEGKSYNLVMYIRSLESVELAASLTCSDGLQNIAT 330
Score = 116 bits (248), Expect(2) = 1e-029
Identities = 55/101 (54%), Positives = 60/101 (59%)
Frame = -2 / -3
Query: 572 ARFCNPSELVSETVKHVVFGDLTYITR*YVFPSSMFMPQNPGL*MPTPPAGQSLQRTSIL 393
A FC+PSE VSE DL YITR +FPSSMFMPQNPGL*+PTPPAG QR SIL
Sbjct: 326 AIFCSPSEHVSEAANSTDSSDLIYITRL*LFPSSMFMPQNPGL*IPTPPAGHLAQRISIL 147
Query: 392 RATMFRLKHDXXXXXXXXXXXXXXXSQGSMFDGVLGPPASK 270
RAT+F LK D GSMF+GV P K
Sbjct: 146 RATIFLLKQDVLSVFTYMEDSSPMIDHGSMFEGVXRPSGFK 24
Score = 32.6 bits (65), Expect(2) = 1e-029
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = -2 / -1
Query: 287 GPPASKPLLLTSS 249
GPPASKPLLLTSS
Sbjct: 40 GPPASKPLLLTSS 2
Score = 32.6 bits (65), Expect(2) = 1e-050
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +1 / +3
Query: 250 ELVSNRGFEAGGP 288
ELVSN+GFEAGGP
Sbjct: 3 ELVSNKGFEAGGP 41
>gb|BM374077.2|BM374077 EBma03_SQ003_J08_R maternal, 8 DPA, no treatment, cv Optic, EBma03
Hordeum vulgare subsp. vulgare cDNA clone
EBma03_SQ003_J08 5', mRNA sequence
Length = 659
Score = 194 bits (418), Expect = 5e-049
Identities = 77/121 (63%), Positives = 91/121 (75%)
Frame = +1 / +3
Query: 100 CLGGASGLNSTQMVTLKVDASPKLARKIPDTFLGVFFEEMGHGGAGGIWAELVSNRGFEA 279
CL A+ L Q L+VD S K ARKIP T G+FFEE+ H GAGG+WAELVSN+GFE
Sbjct: 147 CLALAAELEGAQTALLQVDTSWKAARKIPQTLFGLFFEEINHAGAGGLWAELVSNKGFET 326
Query: 280 GGPNTPSNIDPWLIVGDDSSVYVETDRSSCFSRNIVALRMEVLCNDCPAGGVGIYNPGFW 459
GGP+TPSNIDPW I+GD+SS+YV+T+R+SCFSRNIVALRME+LC CPAG P
Sbjct: 327 GGPHTPSNIDPWSIIGDESSIYVKTERTSCFSRNIVALRMEILCAKCPAGRCWYLQPRIL 506
Query: 460 G 462
G
Sbjct: 507 G 509
Score = 119 bits (255), Expect(2) = 1e-043
Identities = 57/110 (51%), Positives = 63/110 (57%)
Frame = -2 / -2
Query: 428 PAGQSLQRTSILRATMFRLKHDXXXXXXXXXXXXXXXSQGSMFDGVLGPPASKPLLLTSS 249
PAG QR SILRAT+F LK D GSMF+GV GPP SKPLLLTSS
Sbjct: 475 PAGHLAQRISILRATIFLLKQDVLSVFTYMEDSSPMIDHGSMFEGV*GPPVSKPLLLTSS 296
Query: 248 AHIPPAPPWPISSKNTPRNVSGIFRASFGEASTLRVTIWVEFRPDAPPRH 99
AH PPAP W ISSKN P+ V GIF A+F + ST + A RH
Sbjct: 295 AHNPPAPAWLISSKNKPKRV*GIFLAAFHDVSTCSSAV*APSSSAASARH 146
Score = 92.1 bits (195), Expect(2) = 4e-039
Identities = 35/50 (70%), Positives = 44/50 (88%)
Frame = +1 / +1
Query: 427 GGVGIYNPGFWGMNIEDGKTYHLVMYVKSPKTTCLTVSLTSSDGLQNLAS 576
GGVGIYNPGFWGMNIE+GK+Y+LVMY++S ++ L SLT SDGLQN+A+
Sbjct: 475 GGVGIYNPGFWGMNIEEGKSYNLVMYIRSLESVELAASLTCSDGLQNIAT 624
Score = 88.9 bits (188), Expect(2) = 4e-039
Identities = 42/104 (40%), Positives = 57/104 (54%)
Frame = +3 / +2
Query: 117 RSEFNPDGNPQG*CLAKACSKDPRYIPWGVL*GDGPRRSWWDMGRTGQQQRFRSRRPQYS 296
R+ DG + + KDP W VL*G+ PR SWW MG Q QRF +RR +S
Sbjct: 164 RARGGSDGAATSRYIMEGRQKDPSNPLWLVL*GNQPRWSWWIMGGACQ*QRF*NRRASHS 343
Query: 297 IEH*PLAHRWGRLLRLCGD*SFVMFQSKHRCSKDGGPLQ*LPGW 428
+H + + W R+L + D* ++FQ K+RCSKDG L + W
Sbjct: 344 FKHRSMVYHW*RILHIRED*KNILFQ*KYRCSKDGNSLCQVSSW 475
Score = 83.4 bits (176), Expect(2) = 2e-024
Identities = 41/81 (50%), Positives = 51/81 (62%)
Frame = -1 / -1
Query: 408 EDLHP*SNDVSTET*RTISLHIDGGVVPNDEPGVNVRWSIGASCFETSVADQFCPYPTSS 229
++ HP*SND+STET + SLH+ GG V ND P + V S+ S F+T V D+ P TSS
Sbjct: 455 KNFHP*SNDISTETRCSFSLHVYGGFVTNDRPWIYV*RSVRPSGFKTFVTDKLRP*STSS 276
Query: 228 SVAHLLKEHPKECIGDLSSKL 166
SV LKE KE + DLS L
Sbjct: 275 SVVDFLKEQAKEGLRDLSGGL 213
Score = 76.5 bits (161), Expect(2) = 1e-043
Identities = 33/50 (66%), Positives = 37/50 (74%)
Frame = -2 / -1
Query: 572 ARFCNPSELVSETVKHVVFGDLTYITR*YVFPSSMFMPQNPGL*MPTPPA 423
A FC+PSE VSE DL YITR +FPSSMFMPQNPGL*+PTPP+
Sbjct: 620 AIFCSPSEHVSEAANSTDSSDLIYITRL*LFPSSMFMPQNPGL*IPTPPS 471
Score = 71.1 bits (149), Expect(2) = 3e-021
Identities = 40/76 (52%), Positives = 46/76 (60%)
Frame = +2 / +1
Query: 176 ERSPIHSLGCSLRRWATEELVGYGQNWSATEVSKQEAPILHRTLTPGSSLGTTPPSMWRL 355
ERS SL CSLR+ T ELV YG++ S T+V K E L +T G SL T PP RL
Sbjct: 223 ERSLKPSLACSLRKSTTLELVDYGRSLSVTKVLKPEGLTLLQT*IHGLSLVTNPPYT*RL 402
Query: 356 IVRHVSVETSLL*GWR 403
VSVE SLL*GW+
Sbjct: 403 KEHLVSVEISLL*GWK 450
Score = 50.0 bits (103), Expect(2) = 3e-021
Identities = 20/49 (40%), Positives = 28/49 (57%)
Frame = +3 / +3
Query: 420 PGWRCWHLQPWILGHEHRRWKDISSSYVC*VAKNHMLDSFADKL*WVAE 566
P RCW+LQP ILGHEHRR +++ S V + + + F W A+
Sbjct: 468 PAGRCWYLQPRILGHEHRRREEL*SGNVYQITRIRGVSCFTHMFRWTAK 614
Score = 48.2 bits (99), Expect(2) = 2e-024
Identities = 25/47 (53%), Positives = 29/47 (61%)
Frame = -1 / -3
Query: 567 ILQPIRACQRNCQACGFWRLNIHN*MICLSIFYVHAPESRVVNANTA 427
ILQ I C+ + GF +IH +I L FYVHAPES VVN NTA
Sbjct: 615 ILQSI*TCE*SS*LHGF**SDIHYQIIALPFFYVHAPESWVVNTNTA 475
>gb|BI949335.1|BI949335 HVSMEl0013G12f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0013G12f, mRNA sequence
Length = 489
Score = 192 bits (415), Expect = 1e-048
Identities = 75/112 (66%), Positives = 89/112 (79%)
Frame = +1 / +3
Query: 100 CLGGASGLNSTQMVTLKVDASPKLARKIPDTFLGVFFEEMGHGGAGGIWAELVSNRGFEA 279
CL A+ L L+VD S K ARKIP T G+FFEE+ H GAGG+WAELVSN+GFEA
Sbjct: 153 CLALAAELEGAHTALLQVDTSWKAARKIPQTLFGLFFEEINHAGAGGLWAELVSNKGFEA 332
Query: 280 GGPNTPSNIDPWLIVGDDSSVYVETDRSSCFSRNIVALRMEVLCNDCPAGGV 435
GGP+TPSNIDPW I+GD+SS+YV+T+R+SCFSRNIVAL ME+LC CP GGV
Sbjct: 333 GGPHTPSNIDPWSIIGDESSIYVKTERTSCFSRNIVALTMEILCAKCPTGGV 488
Score = 123 bits (264), Expect = 7e-028
Identities = 58/112 (51%), Positives = 65/112 (58%)
Frame = -2 / -3
Query: 434 TPPAGQSLQRTSILRATMFRLKHDXXXXXXXXXXXXXXXSQGSMFDGVLGPPASKPLLLT 255
TPP G QR SI+RAT+F LK D GSMF+GV GPPASKPLLLT
Sbjct: 487 TPPVGHLAQRISIVRATIFLLKQDVLSVFTYMEDSSPMIDHGSMFEGV*GPPASKPLLLT 308
Query: 254 SSAHIPPAPPWPISSKNTPRNVSGIFRASFGEASTLRVTIWVEFRPDAPPRH 99
SSAH PPAP W ISSKN P+ V GIF A+F + ST + A RH
Sbjct: 307 SSAHNPPAPAWLISSKNKPKRV*GIFLAAFHDVSTCSSAV*APSSSAASARH 152
>gb|CA024152.1|CA024152 HZ48I02r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ48I02
5-PRIME, mRNA sequence
Length = 463
Score = 174 bits (376), Expect = 3e-043
Identities = 69/100 (69%), Positives = 82/100 (82%)
Frame = +1 / +1
Query: 100 CLGGASGLNSTQMVTLKVDASPKLARKIPDTFLGVFFEEMGHGGAGGIWAELVSNRGFEA 279
CL A+ L Q L+VD S K ARKIP T G+FFEE+ H GAGG+WAELVSN+GFEA
Sbjct: 163 CLALAAELEGAQTALLQVDTSWKAARKIPQTLFGLFFEEINHAGAGGLWAELVSNKGFEA 342
Query: 280 GGPNTPSNIDPWLIVGDDSSVYVETDRSSCFSRNIVALRM 399
GGP+TPSNIDPW I+GD+SS+YV+T+R+SCFSRNIVALRM
Sbjct: 343 GGPHTPSNIDPWSIIGDESSIYVKTERTSCFSRNIVALRM 462
Score = 109 bits (232), Expect = 2e-023
Identities = 52/100 (52%), Positives = 58/100 (58%)
Frame = -2 / -3
Query: 398 ILRATMFRLKHDXXXXXXXXXXXXXXXSQGSMFDGVLGPPASKPLLLTSSAHIPPAPPWP 219
ILRAT+F LK D GSMF+GV GPPASKPLLLTSSAH PPAP W
Sbjct: 461 ILRATIFLLKQDVLSVFTYMEDSSPMIDHGSMFEGV*GPPASKPLLLTSSAHNPPAPAWL 282
Query: 218 ISSKNTPRNVSGIFRASFGEASTLRVTIWVEFRPDAPPRH 99
ISSKN P+ V GIF A+F + ST + A RH
Sbjct: 281 ISSKNKPKRV*GIFLAAFHDVSTCSSAV*APSSSAASARH 162
>gb|BM100077.2|BM100077 EBma01_SQ001_B24_R maternal, 4 DPA, no treatment, cv Optic, EBma01
Hordeum vulgare subsp. vulgare cDNA clone
EBma01_SQ001_B24 5', mRNA sequence
Length = 223
Score = 160 bits (344), Expect = 8e-039
Identities = 58/73 (79%), Positives = 70/73 (95%)
Frame = +1 / +3
Query: 295 PSNIDPWLIVGDDSSVYVETDRSSCFSRNIVALRMEVLCNDCPAGGVGIYNPGFWGMNIE 474
PSNIDPW I+GD+SS+YV+T+R+SCFSRNIVALRME+LC CPAGGVGIYNPGFWGMNIE
Sbjct: 3 PSNIDPWSIIGDESSIYVKTERTSCFSRNIVALRMEILCAKCPAGGVGIYNPGFWGMNIE 182
Query: 475 DGKTYHLVMYVKS 513
+GK+Y+LVMY++S
Sbjct: 183 EGKSYNLVMYIRS 221
>gb|AW982740.2|AW982740 HVSMEg0004B07f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0004B07f, mRNA sequence
Length = 605
Score = 134 bits (288), Expect(2) = 3e-036
Identities = 54/66 (81%), Positives = 60/66 (90%)
Frame = +1 / +2
Query: 379 NIVALRMEVLCNDCPAGGVGIYNPGFWGMNIEDGKTYHLVMYVKSPKTTCLTVSLTSSDG 558
+I+AL+MEVLC+DCPA GVGIYNPGFWGMNIEDGKTY+LVMYVKS + LTVSL SSDG
Sbjct: 53 DIIALKMEVLCDDCPASGVGIYNPGFWGMNIEDGKTYNLVMYVKSAEAAELTVSLASSDG 232
Query: 559 LQNLAS 576
LQNLAS
Sbjct: 233 LQNLAS 250
Score = 117 bits (250), Expect(2) = 1e-026
Identities = 52/65 (80%), Positives = 53/65 (81%)
Frame = -2 / -3
Query: 575 EARFCNPSELVSETVKHVVFGDLTYITR*YVFPSSMFMPQNPGL*MPTPPAGQSLQRTSI 396
EARFCNPSEL +ETV DLTYITR VFPSSMFMPQNPGL*MPTP AGQS QRTSI
Sbjct: 249 EARFCNPSELANETVNSAASADLTYITRL*VFPSSMFMPQNPGL*MPTPLAGQSSQRTSI 70
Query: 395 LRATM 381
LRA M
Sbjct: 69 LRAIM 55
Score = 113 bits (242), Expect(2) = 3e-029
Identities = 44/69 (63%), Positives = 52/69 (75%)
Frame = +3 / +1
Query: 369 FQSKHRCSKDGGPLQ*LPGWRCWHLQPWILGHEHRRWKDISSSYVC*VAKNHMLDSFADK 548
F +H S DGG L *LP CWHLQPW+LGHEHRRWKD+ SSYVC*++++ +DSF K
Sbjct: 43 FSRRHYRS*DGGSL**LPSQWCWHLQPWVLGHEHRRWKDLQSSYVC*ISRSCRIDSFISK 222
Query: 549 L*WVAESGF 575
L WVAES F
Sbjct: 223 LRWVAESCF 249
Score = 101 bits (215), Expect = 4e-021
Identities = 44/65 (67%), Positives = 47/65 (72%)
Frame = -3 / -1
Query: 574 KPDSATHQSLSAKLSSMWFLAT*HT*LDDMSFHLLCSCPRIQGCKCQHRQPGSHCRGPPS 395
K DSATH+SL KLS + L *HT*LD SFHLLCSCPR QGCKCQH GSH R PPS
Sbjct: 248 KQDSATHRSLLMKLSILQLLLI*HT*LDCRSFHLLCSCPRTQGCKCQHHWLGSHHREPPS 69
Query: 394 LEQRC 380
E+ C
Sbjct: 68 *ER*C 54
Score = 86.6 bits (183), Expect(2) = 5e-021
Identities = 43/59 (72%), Positives = 46/59 (77%)
Frame = +2 / +3
Query: 398 WRSSAMTARLAVLAFTTLDSGA*T*KMERHII*LCMLSRQKPHA*QFR*QALMGCRIWL 574
WR S MTA+ VLAFTTL SGA*T*KMER I*LCML++QK *QF *QA MGCRI L
Sbjct: 72 WRFSVMTAQPVVLAFTTLGSGA*T*KMERPTI*LCMLNQQKLQN*QFH*QAPMGCRILL 248
Score = 36.7 bits (74), Expect(2) = 3e-036
Identities = 13/17 (76%), Positives = 16/17 (94%)
Frame = +1 / +1
Query: 328 DDSSVYVETDRSSCFSR 378
DDSS++V TDR+SCFSR
Sbjct: 1 DDSSIFVATDRTSCFSR 51
Score = 34.0 bits (68), Expect(2) = 3e-029
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = +3 / +3
Query: 330 RLLRLCGD*SFVMFQSK 380
RL +CGD*S++MFQSK
Sbjct: 3 RLFHICGD*SYIMFQSK 53
Score = 33.5 bits (67), Expect(2) = 5e-021
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +2 / +2
Query: 329 TTPPSMWRLIVRHVSVE 379
TT P +WRLIV HVSVE
Sbjct: 2 TTLPYLWRLIVHHVSVE 52
Score = 22.1 bits (42), Expect(2) = 1e-026
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = -1 / -3
Query: 378 STET*RTISLHIDGGVV 328
STET* TIS H G VV
Sbjct: 51 STET*CTISRHKYGRVV 1
>gb|CA024885.1|CA024885 HZ50J14r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ50J14
5-PRIME, mRNA sequence
Length = 417
Score = 149 bits (320), Expect = 2e-035
Identities = 58/89 (65%), Positives = 71/89 (79%)
Frame = +1 / +3
Query: 100 CLGGASGLNSTQMVTLKVDASPKLARKIPDTFLGVFFEEMGHGGAGGIWAELVSNRGFEA 279
CL A+ L Q L+VD S K ARKIP T G+FFEE+ H GAGG+WAELVSN+GFEA
Sbjct: 150 CLALAAELEGAQTALLQVDTSWKAARKIPQTLFGLFFEEINHAGAGGLWAELVSNKGFEA 329
Query: 280 GGPNTPSNIDPWLIVGDDSSVYVETDRSS 366
GGP+TPSNIDPW I+GD+SS+YV+T+R+S
Sbjct: 330 GGPHTPSNIDPWSIIGDESSIYVKTERTS 416
>gb|CA026435.1|CA026435 HZ55O15r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ55O15
5-PRIME, mRNA sequence
Length = 438
Score = 149 bits (320), Expect = 2e-035
Identities = 58/89 (65%), Positives = 71/89 (79%)
Frame = +1 / +2
Query: 100 CLGGASGLNSTQMVTLKVDASPKLARKIPDTFLGVFFEEMGHGGAGGIWAELVSNRGFEA 279
CL A+ L Q L+VD S K ARKIP T G+FFEE+ H GAGG+WAELVSN+GFEA
Sbjct: 170 CLALAAELEGAQTALLQVDTSWKAARKIPQTLFGLFFEEINHAGAGGLWAELVSNKGFEA 349
Query: 280 GGPNTPSNIDPWLIVGDDSSVYVETDRSS 366
GGP+TPSNIDPW I+GD+SS+YV+T+R+S
Sbjct: 350 GGPHTPSNIDPWSIIGDESSIYVKTERTS 436
>gb|BF627539.2|BF627539 HVSMEb0005C01f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0005C01f, mRNA sequence
Length = 789
Score = 147 bits (316), Expect = 5e-035
Identities = 65/102 (63%), Positives = 77/102 (75%)
Frame = +1 / +3
Query: 112 ASGLNSTQMVTLKVDASPKLARKIPDTFLGVFFEEMGHGGAGGIWAELVSNRGFEAGGPN 291
AS L +TQ TLKVDAS +LARKIPDT G+FFEE+ H AGGIWAELVS+RGFEAGG +
Sbjct: 180 ASELQATQTATLKVDASSQLARKIPDTLFGMFFEEINHA*AGGIWAELVSDRGFEAGGLH 359
Query: 292 TPSNIDPWLIVGDDSSVYVETDRSSCFSRNIVALRMEVLCND 417
P N+DPW IVGDDS + V TDR+ C S +I RM+ L +D
Sbjct: 360 APWNMDPWSIVGDDSFICVVTDRT*CRSLSIGRRRMDGLRHD 485
Score = 115 bits (246), Expect(2) = 2e-025
Identities = 57/121 (47%), Positives = 66/121 (54%)
Frame = -2 / -3
Query: 461 PQNPGL*MPTPPAGQSLQRTSILRATMFRLKHDXXXXXXXXXXXXXXXSQGSMFDGVLGP 282
P+ P + P +S + SILR M RL+H GS+F G P
Sbjct: 529 PRVPRVVHGAPMHPRSWRNPSILRRPMLRLRHHVRSVTTHMKESSPTIDHGSIFHGAWSP 350
Query: 281 PASKPLLLTSSAHIPPAPPWPISSKNTPRNVSGIFRASFGEASTLRVTIWVEFRPDAPPR 102
PAS PL LTSSAH+PPA W ISSKN P +VSGIFRAS EASTLRV + V DA
Sbjct: 349 PASNPLSLTSSAHMPPAHAWLISSKNIPNSVSGIFRASCDEASTLRVAVCVACNSDAMHL 170
Query: 101 H 99
H
Sbjct: 169 H 167
Score = 104 bits (221), Expect = 6e-022
Identities = 47/101 (46%), Positives = 61/101 (60%)
Frame = +3 / +2
Query: 99 MSRRSVRSEFNPDGNPQG*CLAKACSKDPRYIPWGVL*GDGPRRSWWDMGRTGQQQRFRS 278
M S+ + DG+PQG*CL AC KD R+ W V *GD P S W MGRT + R S
Sbjct: 167 MQMHSIGITSDTDGHPQG*CLITACPKDTRHTVWDVF*GDQPCMSRWHMGRTCE**RV*S 346
Query: 279 RRPQYSIEH*PLAHRWGRLLRLCGD*SFVMFQSKHRCSKDG 401
R ++E+ P+ + W RL +CGD*S +M QS+H S+DG
Sbjct: 347 WRTPCTMEYGPMVYSWRRLFHMCGD*SHMMSQSEHWSSEDG 469
Score = 21.6 bits (41), Expect(2) = 2e-025
Identities = 6/9 (66%), Positives = 8/9 (88%)
Frame = -3 / -1
Query: 31 WNPCASTCQ 5
WNP AS+C+
Sbjct: 114 WNPYASSCK 88
>gb|CA020538.1|CA020538 HZ36J20r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ36J20
5-PRIME, mRNA sequence
Length = 416
Score = 147 bits (315), Expect = 7e-035
Identities = 57/87 (65%), Positives = 69/87 (79%)
Frame = +1 / +1
Query: 100 CLGGASGLNSTQMVTLKVDASPKLARKIPDTFLGVFFEEMGHGGAGGIWAELVSNRGFEA 279
CL A+ L Q L+VD S K ARKIP T G+FFEE+ H GAGG+WAELVSN+GFEA
Sbjct: 154 CLALAAELEGAQTALLQVDTSWKAARKIPQTLFGLFFEEINHAGAGGLWAELVSNKGFEA 333
Query: 280 GGPNTPSNIDPWLIVGDDSSVYVETDR 360
GGP+TPSNIDPW I+GD+SS+YV+T+R
Sbjct: 334 GGPHTPSNIDPWSIIGDESSIYVKTER 414
>gb|BI952689.1|BI952689 HVSMEm0007G12f Hordeum vulgare green seedling EST library
HVcDNA0014 (Blumeria infected) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEm0007G12f, mRNA sequence
Length = 417
Score = 145 bits (311), Expect = 3e-034
Identities = 56/88 (63%), Positives = 69/88 (78%)
Frame = +1 / +3
Query: 100 CLGGASGLNSTQMVTLKVDASPKLARKIPDTFLGVFFEEMGHGGAGGIWAELVSNRGFEA 279
CL A+ L L+VD S K ARKIP T G+FFEE+ H GAGG+WAELVSN+GFEA
Sbjct: 153 CLALAAELEGAHTALLQVDTSWKAARKIPQTLFGLFFEEINHAGAGGLWAELVSNKGFEA 332
Query: 280 GGPNTPSNIDPWLIVGDDSSVYVETDRS 363
GGP+TPSNIDPW I+GD+SS+YV+T+R+
Sbjct: 333 GGPHTPSNIDPWSIIGDESSIYVKTERT 416
>gb|CA024147.1|CA024147 HZ48H21r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ48H21
5-PRIME, mRNA sequence
Length = 428
Score = 143 bits (308), Expect = 7e-034
Identities = 56/85 (65%), Positives = 67/85 (78%)
Frame = +1 / +2
Query: 100 CLGGASGLNSTQMVTLKVDASPKLARKIPDTFLGVFFEEMGHGGAGGIWAELVSNRGFEA 279
CL A+ L Q L+VD S K ARKIP T G+FFEE+ H GAGG+WAELVSN+GFEA
Sbjct: 173 CLALAAELEGAQTALLQVDTSWKAARKIPQTLFGLFFEEINHAGAGGLWAELVSNKGFEA 352
Query: 280 GGPNTPSNIDPWLIVGDDSSVYVET 354
GGP+TPSNIDPW I+GD+SS+YV+T
Sbjct: 353 GGPHTPSNIDPWSIIGDESSIYVKT 427
>gb|CA028957.1|CA028957 HZ63L22r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ63L22
5-PRIME, mRNA sequence
Length = 390
Score = 138 bits (297), Expect = 2e-032
Identities = 56/73 (76%), Positives = 62/73 (84%)
Frame = +1 / +3
Query: 112 ASGLNSTQMVTLKVDASPKLARKIPDTFLGVFFEEMGHGGAGGIWAELVSNRGFEAGGPN 291
AS L +TQ TLKVDAS +LARKIPDT G+FFEE+ H GAGGIWAELVSNRGFEAGG +
Sbjct: 171 ASELQATQTATLKVDASSQLARKIPDTLFGMFFEEINHAGAGGIWAELVSNRGFEAGGLH 350
Query: 292 TPSNIDPWLIVGD 330
TPSNIDPW I+GD
Sbjct: 351 TPSNIDPWSIIGD 389
Score = 114 bits (243), Expect(2) = 2e-025
Identities = 50/71 (70%), Positives = 54/71 (76%)
Frame = -2 / -3
Query: 311 GSMFDGVLGPPASKPLLLTSSAHIPPAPPWPISSKNTPRNVSGIFRASFGEASTLRVTIW 132
GS+FDGV PPASKPLLLTSSAH+PPAP W ISSKN P +VSGIFRAS EASTLRV +
Sbjct: 370 GSIFDGVWSPPASKPLLLTSSAHMPPAPAWLISSKNIPNSVSGIFRASCDEASTLRVAVC 191
Query: 131 VEFRPDAPPRH 99
V DA H
Sbjct: 190 VACNSDAMHLH 158
Score = 21.6 bits (41), Expect(2) = 2e-025
Identities = 6/9 (66%), Positives = 8/9 (88%)
Frame = -3 / -1
Query: 31 WNPCASTCQ 5
WNP AS+C+
Sbjct: 105 WNPYASSCK 79
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.317 0.136 0.423
Matrix: BLOSUM62
Number of Hits to DB: 356,663,453
Number of Sequences: 312970
Number of extensions: 6447260
Number of successful extensions: 98918
Number of sequences better than 1.0e-020: 22
length of database: 58,378,179
effective HSP length: 48
effective length of database: 43,355,619
effective search space used: 6676765326
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.6 bits)