TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QBH4g04.xg.3.1
(1549 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CK124237.1|CK124237 BES1824108b04 BES1824 Hordeum vulgar... 346 e-127
gb|BQ472695.1|BQ472695 HB01M10r BC Hordeum vulgare subsp. v... 451 e-126
gb|CK123702.1|CK123702 BES1824105c04 BES1824 Hordeum vulgar... 414 e-115
gb|CV056433.1|CV056433 BNEL17F7 Barley EST endosperm librar... 411 e-114
gb|AL503871.1|AL503871 AL503871 Hordeum vulgare Barke roots... 406 e-112
gb|BF619342.2|BF619342 HVSMEc0016I11f Hordeum vulgare seedl... 385 e-106
gb|CK124582.1|CK124582 BES1824109l04 BES1824 Hordeum vulgar... 377 e-103
gb|BF267991.2|BF267991 HV_CEa0019I11f Hordeum vulgare seedl... 318 e-102
gb|BI959942.1|BI959942 HVSMEn0022H23f Hordeum vulgare rachi... 369 e-101
gb|BI959226.1|BI959226 HVSMEn0018L24f Hordeum vulgare rachi... 368 e-101
gb|BI960113.1|BI960113 HVSMEn0023E13f Hordeum vulgare rachi... 368 e-101
gb|BU995453.1|BU995453 HM10E21r HM Hordeum vulgare subsp. v... 366 e-100
gb|BM370819.2|BM370819 EBro04_SQ002_G06_R root, 3 week, sal... 360 1e-098
gb|BU994746.1|BU994746 HM08B05r HM Hordeum vulgare subsp. v... 358 5e-098
gb|BU995659.1|BU995659 HM10P06r HM Hordeum vulgare subsp. v... 358 5e-098
gb|BQ469455.1|BQ469455 HM04M12r HM Hordeum vulgare subsp. v... 352 4e-096
gb|BI776320.2|BI776320 EBem04_SQ001_J09_R embryo, 12 DPA, n... 351 6e-096
gb|BU981623.1|BU981623 HA24C13r HA Hordeum vulgare subsp. v... 350 1e-095
gb|BI959274.1|BI959274 HVSMEn0019A10f Hordeum vulgare rachi... 233 3e-094
gb|BG415409.1|BG415409 HVSMEk0006G08f Hordeum vulgare testa... 342 3e-093
gb|BU996404.1|BU996404 HM13H22r HM Hordeum vulgare subsp. v... 341 4e-093
gb|BF254147.3|BF254147 HVSMEf0003C12f Hordeum vulgare seedl... 339 3e-092
gb|BI960452.1|BI960452 HVSMEn0024K09f Hordeum vulgare rachi... 334 7e-091
gb|BF255121.2|BF255121 HVSMEf0006A05f Hordeum vulgare seedl... 279 5e-090
gb|AL507171.1|AL507171 AL507171 Hordeum vulgare Barke devel... 325 3e-088
gb|BQ766977.1|BQ766977 EBro08_SQ007_K16_R root, 3 week, dro... 325 3e-088
gb|AW982436.3|AW982436 HVSMEg0003E07f Hordeum vulgare pre-a... 314 3e-088
gb|BQ468435.1|BQ468435 HM01D23T HM Hordeum vulgare subsp. v... 324 1e-087
gb|BU980246.1|BU980246 HA20B22r HA Hordeum vulgare subsp. v... 322 3e-087
gb|BG309049.1|BG309049 HVSMEc0001M03f Hordeum vulgare seedl... 318 5e-086
gb|BF263628.2|BF263628 HV_CEa0007D23f Hordeum vulgare seedl... 318 5e-086
gb|CV060879.1|CV060879 BNEL62c7 Barley EST endosperm librar... 318 5e-086
gb|BE214310.3|BE214310 HV_CEb0003B05f Hordeum vulgare seedl... 318 7e-086
gb|BF261002.3|BF261002 HVSMEf0023I02f Hordeum vulgare seedl... 314 8e-085
gb|CA012659.1|CA012659 HT06A23r HT Hordeum vulgare subsp. v... 312 3e-084
gb|BF263526.1|BF263526 HV_CEa0006P16f Hordeum vulgare seedl... 275 2e-083
gb|CA007382.1|CA007382 HU07M08r HU Hordeum vulgare subsp. v... 306 2e-082
gb|BI953414.1|BI953414 HVSMEm0012J13f Hordeum vulgare green... 303 1e-081
gb|CB880871.1|CB880871 HM08B05w HM Hordeum vulgare subsp. v... 303 2e-081
gb|BG343619.2|BG343619 HVSMEg0006A18f Hordeum vulgare pre-a... 300 1e-080
gb|BI958022.1|BI958022 HVSMEn0012P20f Hordeum vulgare rachi... 292 1e-078
gb|BQ768499.1|BQ768499 EBro08_SQ011_K21_R root, 3 week, dro... 290 2e-077
gb|BQ469460.1|BQ469460 HM04N23r HM Hordeum vulgare subsp. v... 286 2e-076
gb|CA019577.1|CA019577 HV12G23r HV Hordeum vulgare subsp. v... 279 3e-074
gb|AL507576.1|AL507576 AL507576 Hordeum vulgare Barke devel... 278 7e-074
gb|CA019641.1|CA019641 HV12K08r HV Hordeum vulgare subsp. v... 273 2e-072
gb|BG308944.2|BG308944 HVSMEc0001A06f Hordeum vulgare seedl... 270 3e-072
gb|CA007881.1|CA007881 HU09E12r HU Hordeum vulgare subsp. v... 266 2e-070
gb|BQ660955.1|BQ660955 HM01D23w HM Hordeum vulgare subsp. v... 250 1e-069
gb|BU967748.1|BU967748 HB05E12r BC Hordeum vulgare subsp. v... 252 3e-066
gb|BU995807.1|BU995807 HM11G22r HM Hordeum vulgare subsp. v... 252 5e-066
gb|BI776391.2|BI776391 EBpi05_SQ001_C05_R pistil, 8 DPA, no... 250 2e-065
gb|AV916863.1|AV916863 AV916863 K. Sato unpublished cDNA li... 232 4e-065
gb|BM442938.2|BM442938 EBro02_SQ001_P05_R root, 3 week, hyd... 248 4e-065
gb|BF255233.2|BF255233 HVSMEf0006F01f Hordeum vulgare seedl... 248 6e-065
gb|BJ472909.1|BJ472909 BJ472909 K. Sato unpublished cDNA li... 245 4e-064
gb|AL504026.1|AL504026 AL504026 Hordeum vulgare Barke roots... 242 5e-063
gb|CB880486.1|CB880486 HM06K24w HM Hordeum vulgare subsp. v... 240 2e-062
gb|BG368842.2|BG368842 HVSMEi0020O16f Hordeum vulgare 20 DA... 235 4e-061
gb|BQ760999.1|BQ760999 EBro04_SQ001_N02_R root, 3 week, sal... 230 2e-059
gb|CV054635.1|CV054635 BNEL111f3 Barley EST endosperm libra... 226 3e-058
gb|BI957161.1|BI957161 HVSMEn0007N18f Hordeum vulgare rachi... 224 9e-058
gb|AV928380.1|AV928380 AV928380 K. Sato unpublished cDNA li... 224 9e-058
gb|BM817353.1|BM817353 HC106A07_T3.ab1 HC Hordeum vulgare s... 223 2e-057
gb|BM441064.2|BM441064 EBed02_SQ002_F05_R endosperm, 8 DPA,... 223 2e-057
gb|CA001965.1|CA001965 HS06C02r HS Hordeum vulgare subsp. v... 221 8e-057
gb|BI956768.1|BI956768 HVSMEn0005E01f Hordeum vulgare rachi... 221 1e-056
gb|BG343515.2|BG343515 HVSMEg0005P17f Hordeum vulgare pre-a... 220 2e-056
gb|BJ472086.1|BJ472086 BJ472086 K. Sato unpublished cDNA li... 217 1e-055
gb|CV060827.1|CV060827 BNEL61f5 Barley EST endosperm librar... 210 2e-053
gb|AV923199.1|AV923199 AV923199 K. Sato unpublished cDNA li... 210 2e-053
gb|BM097638.2|BM097638 EBem04_SQ002_E14_R embryo, 12 DPA, n... 208 8e-053
gb|BQ469475.1|BQ469475 HM04O21r HM Hordeum vulgare subsp. v... 204 8e-052
gb|CA015670.1|CA015670 HV12K08u HV Hordeum vulgare subsp. v... 204 8e-052
gb|BU994332.1|BU994332 HM06K24r HM Hordeum vulgare subsp. v... 199 2e-051
gb|CB875065.1|CB875065 HX07C23w HX Hordeum vulgare subsp. v... 202 4e-051
gb|CA030478.1|CA030478 HX07C23r HX Hordeum vulgare subsp. v... 199 3e-050
gb|AV922161.1|AV922161 AV922161 K. Sato unpublished cDNA li... 190 1e-047
gb|AL510752.1|AL510752 AL510752 Hordeum vulgare Barke devel... 187 2e-046
gb|BQ661699.1|BQ661699 HM04O21u HM Hordeum vulgare subsp. v... 184 9e-046
gb|BI776502.2|BI776502 EBpi05_SQ001_K06_R pistil, 8 DPA, no... 183 2e-045
gb|AL504734.1|AL504734 AL504734 Hordeum vulgare Barke roots... 179 3e-044
gb|BQ765056.1|BQ765056 EBca01_SQ005_M17_R carpel, pre-anthe... 178 6e-044
gb|BG345154.2|BG345154 HVSMEg0018O14f Hordeum vulgare pre-a... 136 9e-043
gb|BU981504.1|BU981504 HA23N07r HA Hordeum vulgare subsp. v... 174 1e-042
gb|BM100549.2|BM100549 EBma01_SQ005_I18_R maternal, 4 DPA, ... 170 2e-041
gb|BF065880.1|BF065880 HV_CEb0014D24f Hordeum vulgare seedl... 165 6e-040
gb|CV061574.1|CV061574 BNEL6E11 Barley EST endosperm librar... 164 1e-039
gb|BQ764378.1|BQ764378 EBan01_SQ005_N14_R anther, yellow st... 162 4e-039
gb|BM442948.2|BM442948 EBro02_SQ002_A03_R root, 3 week, hyd... 160 2e-038
gb|BJ459952.1|BJ459952 BJ459952 K. Sato unpublished cDNA li... 158 9e-038
gb|BQ764288.1|BQ764288 EBan01_SQ005_M09 _R anther, yellow s... 156 2e-037
gb|BG309547.1|BG309547 HVSMEc0010P10f Hordeum vulgare seedl... 156 3e-037
gb|AJ432723.1|AJ432723 AJ432723 S00002 Hordeum vulgare subs... 153 2e-036
gb|BJ452403.1|BJ452403 BJ452403 K. Sato unpublished cDNA li... 152 4e-036
gb|CB880662.1|CB880662 HM07F15w HM Hordeum vulgare subsp. v... 152 4e-036
gb|AJ463324.1|AJ463324 AJ463324 S00002 Hordeum vulgare subs... 151 1e-035
gb|BU994123.1|BU994123 HM05N07r HM Hordeum vulgare subsp. v... 151 1e-035
gb|CV063359.1|CV063359 BNEL89e1 Barley EST endosperm librar... 150 1e-035
gb|CB881814.1|CB881814 HM10P06w HM Hordeum vulgare subsp. v... 149 3e-035
gb|CA000957.1|CA000957 HS06C02u HS Hordeum vulgare subsp. v... 149 5e-035
gb|CB881963.1|CB881963 HM11G22w HM Hordeum vulgare subsp. v... 149 5e-035
gb|AJ463325.1|AJ463325 AJ463325 S00002 Hordeum vulgare subs... 145 7e-034
gb|CA031450.1|CA031450 HX09P19r HX Hordeum vulgare subsp. v... 145 7e-034
gb|CA011294.1|CA011294 HT06A23u HT Hordeum vulgare subsp. v... 144 1e-033
gb|AL502025.1|AL502025 AL502025 Hordeum vulgare Barke roots... 120 2e-033
gb|CA006762.1|CA006762 HU05K05r HU Hordeum vulgare subsp. v... 131 8e-033
gb|BQ766347.1|BQ766347 EBro08_SQ005_P13_R root, 3 week, dro... 138 6e-032
gb|BM372605.2|BM372605 EBpi05_SQ003_G23_R pistil, 8 DPA, no... 134 1e-030
gb|BQ465041.1|BQ465041 HU02H19r HU Hordeum vulgare subsp. v... 131 1e-029
gb|BF065741.3|BF065741 HV_CEb0013L18f Hordeum vulgare seedl... 130 2e-029
gb|BU994005.1|BU994005 HM05F15r HM Hordeum vulgare subsp. v... 130 2e-029
gb|BU996346.1|BU996346 HM13F02r HM Hordeum vulgare subsp. v... 130 2e-029
gb|BU996846.1|BU996846 HM14P13r HM Hordeum vulgare subsp. v... 130 2e-029
gb|CB880634.1|CB880634 HM07D13w HM Hordeum vulgare subsp. v... 128 8e-029
gb|CA031695.1|CA031695 HX10N22r HX Hordeum vulgare subsp. v... 127 2e-028
gb|CB878297.1|CB878297 HP08A10T HP Hordeum vulgare subsp. v... 127 2e-028
gb|BQ468541.1|BQ468541 HM01I19T HM Hordeum vulgare subsp. v... 125 6e-028
gb|CB876050.1|CB876050 HX10C03w HX Hordeum vulgare subsp. v... 125 6e-028
gb|CD662647.1|CD662647 UCRHV18_02cf04_b1 Drought-stressed D... 109 4e-023
gb|BI955253.1|BI955253 HVSMEm0022C11f Hordeum vulgare green... 108 7e-023
>gb|CK124237.1|CK124237 BES1824108b04 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010B048 5-PRIME, mRNA sequence
Length = 775
Score = 346 bits (749), Expect(4) = e-127
Identities = 143/181 (79%), Positives = 155/181 (85%)
Frame = +2 / +1
Query: 110 MAPLGDGGXXXXXXSNNLVVSFGEMLIDFVPDVAGLSLAESGGFVKAPGGAPANVACAIA 289
MAPLGD + LVVSFGEMLIDFVPDVAG+SLAESGGFVKAPGGAPANVACA++
Sbjct: 13 MAPLGDAVAPAAAAAPGLVVSFGEMLIDFVPDVAGVSLAESGGFVKAPGGAPANVACAVS 192
Query: 290 KLGGSSAFVGKFGDDEFGHMLVNILKQNNVNSEGCLFDKHARTALAFVTLKHDGEREFMF 469
KLGGSSAFVGKFGDDEFGHMLV ILKQN VN+EGCLFD+HARTALAFVTLK +GEREFMF
Sbjct: 193 KLGGSSAFVGKFGDDEFGHMLVEILKQNGVNAEGCLFDQHARTALAFVTLKANGEREFMF 372
Query: 470 YRNPSADMLLTEAELDLGLVRRARVFHYGSISLISEPCRSXXXXXXXXXXXXGVLCSYDP 649
YRNPSADMLLTEAEL+L L+RRAR+FHYGSISLI+EPCRS G+LCSYDP
Sbjct: 373 YRNPSADMLLTEAELNLDLIRRARIFHYGSISLITEPCRSAHVAAMRAAKSAGILCSYDP 552
Query: 650 N 652
N
Sbjct: 553 N 555
Score = 214 bits (462), Expect(4) = 9e-080
Identities = 107/187 (57%), Positives = 113/187 (60%)
Frame = -2 / -3
Query: 669 QSGRRTLGS*EQSTPXXXXXXXXXXXAERHGSEMSEMEP*WNTLXXXXXXXXXXXXXXXX 490
++G LGS EQ P AER GS MSEMEP*W
Sbjct: 572 RAGGAPLGSYEQRMPADLAARMAATCAERQGSVMSEMEP*WKMRARRMRSRLSSASVSSM 393
Query: 489 XALGFL*NMNSRSPSCLSVTKASAVRACLSNRHPSEFTLFCFRMFTNMCPNSSSPNLPTK 310
A G *NMNSRSP LSVTKA AVRAC SNR PS T FCFR+ T+M PNSSSPNLPTK
Sbjct: 392 SADGLR*NMNSRSPLALSVTKARAVRACWSNRQPSALTPFCFRISTSMWPNSSSPNLPTK 213
Query: 309 AEDPPSLAMAQATLAGAPPGALTKXXXXXXXXXATSGTKSISISPNDTTRLLDXXXXXAP 130
AE+PPSL AQATLAGAPPGALTK ATSGTKSISISP +TTR A
Sbjct: 212 AEEPPSLETAQATLAGAPPGALTKPPDSASETPATSGTKSISISPKETTRPGAAAAAGAT 33
Query: 129 PSPRGAI 109
SPRGAI
Sbjct: 32 ASPRGAI 12
Score = 76.2 bits (160), Expect(4) = e-127
Identities = 30/34 (88%), Positives = 34/34 (100%)
Frame = +2 / +3
Query: 731 KVSDDEVAFLTRGDANDEKNVLSLWFDGLKLLVV 832
+VSDDEVAFLT+GDANDEKNVLSLWF+GLKLL+V
Sbjct: 636 RVSDDEVAFLTQGDANDEKNVLSLWFEGLKLLIV 737
Score = 66.6 bits (139), Expect(6) = 3e-051
Identities = 31/40 (77%), Positives = 31/40 (77%)
Frame = -1 / -2
Query: 652 VGVVGAEHARGLGCAHGGHVRRAARLGDERDGAVVEHPGA 533
VGVV AE A LG AHGG VRRAA LGDERDGAVVE GA
Sbjct: 555 VGVVRAEDAGRLGSAHGGDVRRAAGLGDERDGAVVEDAGA 436
Score = 63.8 bits (133), Expect(4) = e-127
Identities = 24/29 (82%), Positives = 26/29 (89%)
Frame = +2 / +2
Query: 647 PNVRLPLWPSPDAAREGILSIWKEADFIK 733
P VRLPLWPS AAR+GI+SIWKEADFIK
Sbjct: 551 PTVRLPLWPSAQAARDGIMSIWKEADFIK 637
Score = 61.6 bits (128), Expect(4) = 2e-023
Identities = 26/40 (65%), Positives = 31/40 (77%)
Frame = +1 / +3
Query: 361 PEAEQRELGGVPVRQARADGAGLRDAQARRGARVHVLQEP 480
PEAE+R+ G+PVR ARA G GLR AQ +R ARVHVL +P
Sbjct: 264 PEAERRQRRGLPVRPARAHGPGLRHAQGQRRARVHVLPQP 383
Score = 60.6 bits (126), Expect(4) = 9e-080
Identities = 24/35 (68%), Positives = 29/35 (82%)
Frame = -1 / -3
Query: 841 PVGDDEQLEPVKPQGQHVLLVVGVPAREEGHLVVA 737
P DDEQLE ++P+G+HVLLVVGV EEGHL+VA
Sbjct: 746 PSXDDEQLEALEPEGEHVLLVVGVALGEEGHLIVA 642
Score = 56.1 bits (116), Expect(4) = 9e-080
Identities = 24/29 (82%), Positives = 26/29 (89%)
Frame = -2 / -2
Query: 732 LMKSASFQMLRMPSRAASGDGQSGRRTLG 646
LMKSASFQML MPSRAA +GQSGRRT+G
Sbjct: 636 LMKSASFQMLMMPSRAAWAEGQSGRRTVG 550
Score = 54.2 bits (112), Expect(6) = 3e-051
Identities = 22/27 (81%), Positives = 24/27 (88%)
Frame = -1 / -1
Query: 733 LDEVGLLPDAEDALACGVGRRPEREAH 653
LDEVGLLPDA DA+A G+GR PEREAH
Sbjct: 637 LDEVGLLPDAHDAVAGGLGRGPEREAH 557
Score = 51.5 bits (106), Expect(6) = 3e-051
Identities = 23/26 (88%), Positives = 24/26 (92%)
Frame = -2 / -1
Query: 807 NHRDSTFFSSLASPRVRKATSSSLTL 730
N R+STFFSSLASP VRKATSSSLTL
Sbjct: 712 NQRESTFFSSLASPWVRKATSSSLTL 635
Score = 50.6 bits (104), Expect(6) = 3e-051
Identities = 29/50 (58%), Positives = 29/50 (58%)
Frame = -1 / -2
Query: 478 VPVEHELALPVVLERHEGQRRPRVLVEQAPLRXXXXXXXXXXXXVPELVV 329
V VEHELAL V LER EGQ R RVLVEQA L V ELVV
Sbjct: 381 VAVEHELALAVGLERDEGQGRARVLVEQAALGVDAVLLQDLHQHVAELVV 232
Score = 48.3 bits (99), Expect(4) = 2e-023
Identities = 20/28 (71%), Positives = 22/28 (78%)
Frame = +1 / +3
Query: 535 RQGVPLRLHLAHLRAVPLGAHGRHARSQ 618
R +PLRLHLAH RA+PLGA RHAR Q
Sbjct: 438 RPHLPLRLHLAHHRALPLGARRRHARCQ 521
Score = 47.8 bits (98), Expect(6) = 3e-051
Identities = 19/23 (82%), Positives = 20/23 (86%)
Frame = -1 / -2
Query: 241 EAARLGQRQPGHVGDEVDQHLAE 173
EAA LG+R GHVGDEVDQHLAE
Sbjct: 144 EAAGLGERDAGHVGDEVDQHLAE 76
Score = 36.8 bits (74), Expect(4) = 2e-023
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = +3 / +2
Query: 174 SARC*STSSPTWPGCR 221
SARC*STSSPTWP R
Sbjct: 77 SARC*STSSPTWPASR 124
Score = 29.9 bits (59), Expect(4) = e-127
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +2 / +1
Query: 836 DGDKGCRYFTK 868
DG KGCRYFTK
Sbjct: 742 DGXKGCRYFTK 774
Score = 24.9 bits (48), Expect(4) = 2e-023
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +3 / +3
Query: 654 CASRSGRRPTP 686
CASRSG RP P
Sbjct: 558 CASRSGPRPRP 590
Score = 24.9 bits (48), Expect(4) = 9e-080
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -3 / -1
Query: 869 PW*STCIP 846
PW*STCIP
Sbjct: 775 PW*STCIP 752
Score = 24.0 bits (46), Expect(6) = 3e-051
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -1 / -2
Query: 868 LGEVPASLVPVG 833
LGEVPASL VG
Sbjct: 774 LGEVPASLXAVG 739
>gb|BQ472695.1|BQ472695 HB01M10r BC Hordeum vulgare subsp. vulgare cDNA clone HB01M10
5-PRIME, mRNA sequence
Length = 677
Score = 451 bits (980), Expect = e-126
Identities = 183/222 (82%), Positives = 202/222 (90%)
Frame = +2 / +2
Query: 362 LKQNNVNSEGCLFDKHARTALAFVTLKHDGEREFMFYRNPSADMLLTEAELDLGLVRRAR 541
LKQN VN+EGCLFD+HARTALAFVTLK +GEREFMFYRNPSADMLLTEAEL+L L+RRAR
Sbjct: 11 LKQNGVNAEGCLFDQHARTALAFVTLKANGEREFMFYRNPSADMLLTEAELNLDLIRRAR 190
Query: 542 VFHYGSISLISEPCRSXXXXXXXXXXXXGVLCSYDPNVRLPLWPSPDAAREGILSIWKEA 721
+FHYGSISLI+EPCRS G+LCSYDPNVRLPLWPS AAR+GI+SIWKEA
Sbjct: 191 IFHYGSISLITEPCRSAHVAAMRAAKSAGILCSYDPNVRLPLWPSAQAARDGIMSIWKEA 370
Query: 722 DFIKVSDDEVAFLTRGDANDEKNVLSLWFDGLKLLVVTDGDKGCRYFTKDFKGSVPGFKV 901
DFIKVSDDEVAFLT+GDANDEKNVLSLWF+GLKLL+VTDG+KGCRYFTKDFKGSVPG+ V
Sbjct: 371 DFIKVSDDEVAFLTQGDANDEKNVLSLWFEGLKLLIVTDGEKGCRYFTKDFKGSVPGYSV 550
Query: 902 DTVDTTGAGDAFVGSLLVNVAKDDSIFHNEEKLREALKFSNA 1027
+TVDTTGAGDAFVGSLLVNV+KDDSIF+NE KLRE L+FSNA
Sbjct: 551 NTVDTTGAGDAFVGSLLVNVSKDDSIFYNEAKLREVLQFSNA 676
Score = 281 bits (609), Expect = 5e-075
Identities = 141/223 (63%), Positives = 145/223 (65%)
Frame = -2 / -3
Query: 1026 ALENLRASRSFSSLWKMESSLATLTRREPTKASPAPVVSTVSTLKPGTLPLKSLVKYLHX 847
A EN S S +SL KMESSL TLTRREPTKASPAPVVSTV T PGT PLKSLVKYLH
Sbjct: 675 AFENCSTSLSLASL*KMESSLETLTRREPTKASPAPVVSTVLTE*PGTEPLKSLVKYLHP 496
Query: 846 XXXXXXXXXXXXSNHRDSTFFSSLASPRVRKATSSSLTLMKSASFQMLRMPSRAASGDGQ 667
SN R+STFFSSLASP VRKATSSSLTLMKSASFQML MPSRAA +GQ
Sbjct: 495 FSPSVTMSSLRPSNQRESTFFSSLASPWVRKATSSSLTLMKSASFQMLMMPSRAAWAEGQ 316
Query: 666 SGRRTLGS*EQSTPXXXXXXXXXXXAERHGSEMSEMEP*WNTLXXXXXXXXXXXXXXXXX 487
SGRRTLGS EQ P AER GS MSEMEP*W
Sbjct: 315 SGRRTLGSYEQRMPADLAARMAATCAERQGSVMSEMEP*WKMRARRMRSRLSSASVSSMS 136
Query: 486 ALGFL*NMNSRSPSCLSVTKASAVRACLSNRHPSEFTLFCFRM 358
A G *NMNSRSP LSVTKA AVRAC SNR PS T FCF +
Sbjct: 135 ADGLR*NMNSRSPLALSVTKARAVRACWSNRQPSALTPFCFSL 7
Score = 206 bits (445), Expect(2) = 4e-061
Identities = 91/118 (77%), Positives = 99/118 (83%)
Frame = -1 / -2
Query: 886 HAALEVLGEVPASLVPVGDDEQLEPVKPQGQHVLLVVGVPAREEGHLVVADLDEVGLLPD 707
H ALEVLGEVPASL+ VGDDEQLE ++P+G+HVLLVVGV EEGHL+VA LDEVGLLPD
Sbjct: 535 HGALEVLGEVPASLLAVGDDEQLEALEPEGEHVLLVVGVALGEEGHLIVAHLDEVGLLPD 356
Query: 706 AEDALACGVGRRPEREAHVGVVGAEHARGLGCAHGGHVRRAARLGDERDGAVVEHPGA 533
A DA+A G+GR PEREAHVGVV AE A LG AHGG VRRAA LGDERDGAVVE GA
Sbjct: 355 AHDAVAGGLGRGPEREAHVGVVRAEDAGRLGSAHGGDVRRAAGLGDERDGAVVEDAGA 182
Score = 58.3 bits (121), Expect(3) = 1e-024
Identities = 25/39 (64%), Positives = 30/39 (76%)
Frame = +1 / +1
Query: 364 EAEQRELGGVPVRQARADGAGLRDAQARRGARVHVLQEP 480
EAE+R+ G+PVR ARA G GLR AQ +R ARVHVL +P
Sbjct: 13 EAERRQRRGLPVRPARAHGPGLRHAQGQRRARVHVLPQP 129
Score = 49.6 bits (102), Expect(2) = 4e-061
Identities = 24/31 (77%), Positives = 24/31 (77%)
Frame = -1 / -2
Query: 478 VPVEHELALPVVLERHEGQRRPRVLVEQAPL 386
V VEHELAL V LER EGQ R RVLVEQA L
Sbjct: 127 VAVEHELALAVGLERDEGQGRARVLVEQAAL 35
Score = 48.3 bits (99), Expect(3) = 1e-024
Identities = 20/28 (71%), Positives = 22/28 (78%)
Frame = +1 / +1
Query: 535 RQGVPLRLHLAHLRAVPLGAHGRHARSQ 618
R +PLRLHLAH RA+PLGA RHAR Q
Sbjct: 184 RPHLPLRLHLAHHRALPLGARRRHARCQ 267
Score = 45.1 bits (92), Expect(3) = 1e-024
Identities = 19/27 (70%), Positives = 19/27 (70%)
Frame = +3 / +3
Query: 606 CAQPRPRACSAPTTPTCASRSGRRPTP 686
CA P A SA TTPTCASRSG RP P
Sbjct: 255 CALPSRPASSARTTPTCASRSGPRPRP 335
>gb|CK123702.1|CK123702 BES1824105c04 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010C045 5-PRIME, mRNA sequence
Length = 699
Score = 414 bits (899), Expect = e-115
Identities = 171/219 (78%), Positives = 190/219 (86%)
Frame = +2 / +1
Query: 410 ARTALAFVTLKHDGEREFMFYRNPSADMLLTEAELDLGLVRRARVFHYGSISLISEPCRS 589
ARTALAFVTLK +GEREFMFYRNPSADMLLTEAEL+L L+RRAR+FHYGSISLI+EPCRS
Sbjct: 1 ARTALAFVTLKANGEREFMFYRNPSADMLLTEAELNLDLIRRARIFHYGSISLITEPCRS 180
Query: 590 XXXXXXXXXXXXGVLCSYDPNVRLPLWPSPDAAREGILSIWKEADFIKVSDDEVAFLTRG 769
G+LCSYDPNVRLPLWPS AAR+GI+SIWKEADFIKVSDDEVAFLT+G
Sbjct: 181 AHVAAMRAAKSAGILCSYDPNVRLPLWPSAQAARDGIMSIWKEADFIKVSDDEVAFLTQG 360
Query: 770 DANDEKNVLSLWFDGLKLLVVTDGDKGCRYFTKDFKGSVPGFKVDTVDTTGAGDAFVGSL 949
DANDEKNVLSLWF+GLKLL+VTDG+KGCRYFTKDFKGSVPG+ V+TVDTTGAGDAFVGSL
Sbjct: 361 DANDEKNVLSLWFEGLKLLIVTDGEKGCRYFTKDFKGSVPGYSVNTVDTTGAGDAFVGSL 540
Query: 950 LVNVAKDDSIFHNEEKLREALKFSNACGAICTTKKGAIP 1066
LVNV+KDDSIF+NE KLRE L+FS +KG+ P
Sbjct: 541 LVNVSKDDSIFYNEAKLREVLQFSKRLRXHLHHQKGSHP 657
Score = 256 bits (554), Expect = 2e-067
Identities = 132/218 (60%), Positives = 137/218 (62%)
Frame = -2 / -2
Query: 1065 GMAPFLVVQMAPQALENLRASRSFSSLWKMESSLATLTRREPTKASPAPVVSTVSTLKPG 886
G PF + + EN S S +SL KMESSL TLTRREPTKASPAPVVSTV T PG
Sbjct: 656 GWLPFWWCRWXRKRFENCSTSLSLASL*KMESSLETLTRREPTKASPAPVVSTVLTE*PG 477
Query: 885 TLPLKSLVKYLHXXXXXXXXXXXXXSNHRDSTFFSSLASPRVRKATSSSLTLMKSASFQM 706
T PLKSLVKYLH SN R+STFFSSLASP VRKATSSSLTLMKSASFQM
Sbjct: 476 TEPLKSLVKYLHPFSPSVTMSSLRPSNQRESTFFSSLASPWVRKATSSSLTLMKSASFQM 297
Query: 705 LRMPSRAASGDGQSGRRTLGS*EQSTPXXXXXXXXXXXAERHGSEMSEMEP*WNTLXXXX 526
L MPSRAA +GQSGRRTLGS EQ P AER GS MSEMEP*W
Sbjct: 296 LMMPSRAAWAEGQSGRRTLGSYEQRMPADLAARMAATCAERQGSVMSEMEP*WKMRARRM 117
Query: 525 XXXXXXXXXXXXXALGFL*NMNSRSPSCLSVTKASAVR 412
A G *NMNSRSP LSVTKA AVR
Sbjct: 116 RSRLSSASVSSMSADGLR*NMNSRSPLALSVTKARAVR 3
Score = 206 bits (445), Expect(3) = 1e-065
Identities = 91/118 (77%), Positives = 99/118 (83%)
Frame = -1 / -1
Query: 886 HAALEVLGEVPASLVPVGDDEQLEPVKPQGQHVLLVVGVPAREEGHLVVADLDEVGLLPD 707
H ALEVLGEVPASL+ VGDDEQLE ++P+G+HVLLVVGV EEGHL+VA LDEVGLLPD
Sbjct: 477 HGALEVLGEVPASLLAVGDDEQLEALEPEGEHVLLVVGVALGEEGHLIVAHLDEVGLLPD 298
Query: 706 AEDALACGVGRRPEREAHVGVVGAEHARGLGCAHGGHVRRAARLGDERDGAVVEHPGA 533
A DA+A G+GR PEREAHVGVV AE A LG AHGG VRRAA LGDERDGAVVE GA
Sbjct: 297 AHDAVAGGLGRGPEREAHVGVVRAEDAGRLGSAHGGDVRRAAGLGDERDGAVVEDAGA 124
Score = 64.3 bits (134), Expect(4) = 7e-030
Identities = 23/32 (71%), Positives = 26/32 (81%)
Frame = +1 / +1
Query: 1012 QVLQRLRRHLHHQEGRHPGAAHGRHRPGPHRQ 1107
Q +RLR HLHHQ+G HPGAAH RHRPG H+Q
Sbjct: 604 QFSKRLRXHLHHQKGSHPGAAHHRHRPGAHQQ 699
Score = 52.4 bits (108), Expect(3) = 1e-065
Identities = 24/33 (72%), Positives = 25/33 (75%)
Frame = -2 / -1
Query: 1107 LAMRSWAVATVGSAGMAPFLVVQMAPQALENLR 1009
L M S AVA VGS GMAPFLVVQMAPQA L+
Sbjct: 699 LLMSSRAVAVVGSPGMAPFLVVQMAPQAFRELQ 601
Score = 48.3 bits (99), Expect(4) = 7e-030
Identities = 20/28 (71%), Positives = 22/28 (78%)
Frame = +1 / +3
Query: 535 RQGVPLRLHLAHLRAVPLGAHGRHARSQ 618
R +PLRLHLAH RA+PLGA RHAR Q
Sbjct: 126 RPHLPLRLHLAHHRALPLGARRRHARCQ 209
Score = 45.1 bits (92), Expect(4) = 7e-030
Identities = 19/27 (70%), Positives = 19/27 (70%)
Frame = +3 / +2
Query: 606 CAQPRPRACSAPTTPTCASRSGRRPTP 686
CA P A SA TTPTCASRSG RP P
Sbjct: 197 CALPSRPASSARTTPTCASRSGPRPRP 277
Score = 36.3 bits (73), Expect(3) = 1e-065
Identities = 17/23 (73%), Positives = 17/23 (73%)
Frame = -1 / -1
Query: 478 VPVEHELALPVVLERHEGQRRPR 410
V VEHELAL V LER EGQ R R
Sbjct: 69 VAVEHELALAVGLERDEGQGRAR 1
Score = 35.9 bits (72), Expect(4) = 7e-030
Identities = 15/23 (65%), Positives = 17/23 (73%)
Frame = +1 / +3
Query: 412 ADGAGLRDAQARRGARVHVLQEP 480
A G GLR AQ +R ARVHVL +P
Sbjct: 3 AHGPGLRHAQGQRRARVHVLPQP 71
>gb|CV056433.1|CV056433 BNEL17F7 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL17F7 5' similar to putative
fructokinase II, mRNA sequence
Length = 603
Score = 411 bits (892), Expect = e-114
Identities = 166/200 (83%), Positives = 181/200 (90%)
Frame = +2 / +2
Query: 230 SGGFVKAPGGAPANVACAIAKLGGSSAFVGKFGDDEFGHMLVNILKQNNVNSEGCLFDKH 409
SGGFVKAPGGAPANVACA++KLGGSSAFVGKFGDDEFGHMLV ILKQN VN+EGCLFD+H
Sbjct: 2 SGGFVKAPGGAPANVACAVSKLGGSSAFVGKFGDDEFGHMLVEILKQNGVNAEGCLFDQH 181
Query: 410 ARTALAFVTLKHDGEREFMFYRNPSADMLLTEAELDLGLVRRARVFHYGSISLISEPCRS 589
ARTALAFVTLK +GEREFMFYRNPSADMLLTEAEL+L L+RRAR+FHYGSISLI+EPCRS
Sbjct: 182 ARTALAFVTLKANGEREFMFYRNPSADMLLTEAELNLDLIRRARIFHYGSISLITEPCRS 361
Query: 590 XXXXXXXXXXXXGVLCSYDPNVRLPLWPSPDAAREGILSIWKEADFIKVSDDEVAFLTRG 769
G+LCSYDPNVRLPLWPS AAR+GI+SIWKEADFIKVSDDEVAFLT+G
Sbjct: 362 AHVAAMRAAKSAGILCSYDPNVRLPLWPSAQAARDGIMSIWKEADFIKVSDDEVAFLTQG 541
Query: 770 DANDEKNVLSLWFDGLKLLV 829
DANDEKNVL LWF+GLKLL+
Sbjct: 542 DANDEKNVLXLWFEGLKLLI 601
Score = 271 bits (587), Expect = 6e-072
Identities = 129/190 (67%), Positives = 133/190 (70%)
Frame = -2 / -1
Query: 807 NHRDSTFFSSLASPRVRKATSSSLTLMKSASFQMLRMPSRAASGDGQSGRRTLGS*EQST 628
N R STFFSSLASP VRKATSSSLTLMKSASFQML MPSRAA +GQSGRRTLGS EQ
Sbjct: 579 NQRXSTFFSSLASPWVRKATSSSLTLMKSASFQMLMMPSRAAWAEGQSGRRTLGSYEQRM 400
Query: 627 PXXXXXXXXXXXAERHGSEMSEMEP*WNTLXXXXXXXXXXXXXXXXXALGFL*NMNSRSP 448
P AER GS MSEMEP*W A G *NMNSRSP
Sbjct: 399 PADLAARMAATCAERQGSVMSEMEP*WKMRARRMRSRLSSASVSSMSADGLR*NMNSRSP 220
Query: 447 SCLSVTKASAVRACLSNRHPSEFTLFCFRMFTNMCPNSSSPNLPTKAEDPPSLAMAQATL 268
LSVTKA AVRAC SNR PS T FCFR+ T+M PNSSSPNLPTKAE+PPSL AQATL
Sbjct: 219 LALSVTKARAVRACWSNRQPSALTPFCFRISTSMWPNSSSPNLPTKAEEPPSLETAQATL 40
Query: 267 AGAPPGALTK 238
AGAPPGALTK
Sbjct: 39 AGAPPGALTK 10
Score = 167 bits (359), Expect(2) = 1e-049
Identities = 74/99 (74%), Positives = 81/99 (81%)
Frame = -1 / -3
Query: 829 DEQLEPVKPQGQHVLLVVGVPAREEGHLVVADLDEVGLLPDAEDALACGVGRRPEREAHV 650
DEQLE ++P+ +HVLLVVGV EEGHL+VA LDEVGLLPDA DA+A G+GR PEREAHV
Sbjct: 601 DEQLEALEPEXEHVLLVVGVALGEEGHLIVAHLDEVGLLPDAHDAVAGGLGRGPEREAHV 422
Query: 649 GVVGAEHARGLGCAHGGHVRRAARLGDERDGAVVEHPGA 533
GVV AE A LG AHGG VRRAA LGDERDGAVVE GA
Sbjct: 421 GVVRAEDAGRLGSAHGGDVRRAAGLGDERDGAVVEDAGA 305
Score = 61.6 bits (128), Expect(3) = 1e-025
Identities = 26/40 (65%), Positives = 31/40 (77%)
Frame = +1 / +1
Query: 361 PEAEQRELGGVPVRQARADGAGLRDAQARRGARVHVLQEP 480
PEAE+R+ G+PVR ARA G GLR AQ +R ARVHVL +P
Sbjct: 133 PEAERRQRRGLPVRPARAHGPGLRHAQGQRRARVHVLPQP 252
Score = 50.6 bits (104), Expect(2) = 1e-049
Identities = 29/50 (58%), Positives = 29/50 (58%)
Frame = -1 / -3
Query: 478 VPVEHELALPVVLERHEGQRRPRVLVEQAPLRXXXXXXXXXXXXVPELVV 329
V VEHELAL V LER EGQ R RVLVEQA L V ELVV
Sbjct: 250 VAVEHELALAVGLERDEGQGRARVLVEQAALGVDAVLLQDLHQHVAELVV 101
Score = 48.3 bits (99), Expect(3) = 1e-025
Identities = 20/28 (71%), Positives = 22/28 (78%)
Frame = +1 / +1
Query: 535 RQGVPLRLHLAHLRAVPLGAHGRHARSQ 618
R +PLRLHLAH RA+PLGA RHAR Q
Sbjct: 307 RPHLPLRLHLAHHRALPLGARRRHARCQ 390
Score = 45.1 bits (92), Expect(3) = 1e-025
Identities = 19/27 (70%), Positives = 19/27 (70%)
Frame = +3 / +3
Query: 606 CAQPRPRACSAPTTPTCASRSGRRPTP 686
CA P A SA TTPTCASRSG RP P
Sbjct: 378 CALPSRPASSARTTPTCASRSGPRPRP 458
>gb|AL503871.1|AL503871 AL503871 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW03L01T 5', mRNA sequence
Length = 700
Score = 406 bits (881), Expect = e-112
Identities = 164/204 (80%), Positives = 183/204 (89%)
Frame = +2 / +1
Query: 503 EAELDLGLVRRARVFHYGSISLISEPCRSXXXXXXXXXXXXGVLCSYDPNVRLPLWPSPD 682
EAEL+L L+RRAR+FHYGSISLI+EPCRS G+LCSYDPNVRLPLWPS
Sbjct: 4 EAELNLDLIRRARIFHYGSISLITEPCRSAHVAAMRAAKSAGILCSYDPNVRLPLWPSAQ 183
Query: 683 AAREGILSIWKEADFIKVSDDEVAFLTRGDANDEKNVLSLWFDGLKLLVVTDGDKGCRYF 862
AAR+GI+SIWKEADFIKVSDDEVAFLT+GDANDEKNVLSLWF+GLKLL+VTDG+KGCRYF
Sbjct: 184 AARDGIMSIWKEADFIKVSDDEVAFLTQGDANDEKNVLSLWFEGLKLLIVTDGEKGCRYF 363
Query: 863 TKDFKGSVPGFKVDTVDTTGAGDAFVGSLLVNVAKDDSIFHNEEKLREALKFSNACGAIC 1042
TKDFKGSVPG+ V+TVDTTGAGDAFVGSLLVNV+KDDSIF+NE KLRE L+FSNACGAIC
Sbjct: 364 TKDFKGSVPGYSVNTVDTTGAGDAFVGSLLVNVSKDDSIFYNEAKLREVLQFSNACGAIC 543
Query: 1043 TTKKGAIPALPTVATAQDLIAKAN 1114
TTKKGAIPALPT ATA +LI+K +
Sbjct: 544 TTKKGAIPALPTTATALELISKGS 615
Score = 274 bits (593), Expect = 8e-073
Identities = 135/189 (71%), Positives = 138/189 (73%)
Frame = -2 / -3
Query: 1113 LALAMRSWAVATVGSAGMAPFLVVQMAPQALENLRASRSFSSLWKMESSLATLTRREPTK 934
L L M S AVA VGSAGMAPFLVVQMAPQA EN S S +SL KMESSL TLTRREPTK
Sbjct: 614 LPLLMSSRAVAVVGSAGMAPFLVVQMAPQAFENCSTSLSLASL*KMESSLETLTRREPTK 435
Query: 933 ASPAPVVSTVSTLKPGTLPLKSLVKYLHXXXXXXXXXXXXXSNHRDSTFFSSLASPRVRK 754
ASPAPVVSTV T PGT PLKSLVKYLH SN R+STFFSSLASP VRK
Sbjct: 434 ASPAPVVSTVLTE*PGTEPLKSLVKYLHPFSPSVTMSSLRPSNQRESTFFSSLASPWVRK 255
Query: 753 ATSSSLTLMKSASFQMLRMPSRAASGDGQSGRRTLGS*EQSTPXXXXXXXXXXXAERHGS 574
ATSSSLTLMKSASFQML MPSRAA +GQSGRRTLGS EQ P AER GS
Sbjct: 254 ATSSSLTLMKSASFQMLMMPSRAAWAEGQSGRRTLGSYEQRMPADLAARMAATCAERQGS 75
Query: 573 EMSEMEP*W 547
MSEMEP*W
Sbjct: 74 VMSEMEP*W 48
Score = 206 bits (445), Expect = 2e-052
Identities = 91/118 (77%), Positives = 99/118 (83%)
Frame = -1 / -2
Query: 886 HAALEVLGEVPASLVPVGDDEQLEPVKPQGQHVLLVVGVPAREEGHLVVADLDEVGLLPD 707
H ALEVLGEVPASL+ VGDDEQLE ++P+G+HVLLVVGV EEGHL+VA LDEVGLLPD
Sbjct: 387 HGALEVLGEVPASLLAVGDDEQLEALEPEGEHVLLVVGVALGEEGHLIVAHLDEVGLLPD 208
Query: 706 AEDALACGVGRRPEREAHVGVVGAEHARGLGCAHGGHVRRAARLGDERDGAVVEHPGA 533
A DA+A G+GR PEREAHVGVV AE A LG AHGG VRRAA LGDERDGAVVE GA
Sbjct: 207 AHDAVAGGLGRGPEREAHVGVVRAEDAGRLGSAHGGDVRRAAGLGDERDGAVVEDAGA 34
Score = 77.6 bits (163), Expect(3) = 1e-028
Identities = 29/40 (72%), Positives = 33/40 (82%)
Frame = +1 / +3
Query: 994 EAPRGSQVLQRLRRHLHHQEGRHPGAAHGRHRPGPHRQGQ 1113
+A G+ VL+RLR HLHHQEG HPGAAH RHRPG H+QGQ
Sbjct: 495 QAEGGAAVLERLRCHLHHQEGSHPGAAHHRHRPGAHQQGQ 614
Score = 48.3 bits (99), Expect(3) = 1e-028
Identities = 20/28 (71%), Positives = 22/28 (78%)
Frame = +1 / +3
Query: 535 RQGVPLRLHLAHLRAVPLGAHGRHARSQ 618
R +PLRLHLAH RA+PLGA RHAR Q
Sbjct: 36 RPHLPLRLHLAHHRALPLGARRRHARCQ 119
Score = 45.1 bits (92), Expect(3) = 1e-028
Identities = 19/27 (70%), Positives = 19/27 (70%)
Frame = +3 / +2
Query: 606 CAQPRPRACSAPTTPTCASRSGRRPTP 686
CA P A SA TTPTCASRSG RP P
Sbjct: 107 CALPSRPASSARTTPTCASRSGPRPRP 187
>gb|BF619342.2|BF619342 HVSMEc0016I11f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0016I11f, mRNA sequence
Length = 821
Score = 385 bits (836), Expect = e-106
Identities = 163/233 (69%), Positives = 186/233 (79%)
Frame = +2 / +2
Query: 95 SKRDQMAPLGDGGXXXXXXSNNLVVSFGEMLIDFVPDVAGLSLAESGGFVKAPGGAPANV 274
S+ MAPLGD + LVVSFGEMLIDFVPDVAG+SLAESGGFVKAPGGAPANV
Sbjct: 71 SQEPPMAPLGDAVAPAAAAAPGLVVSFGEMLIDFVPDVAGVSLAESGGFVKAPGGAPANV 250
Query: 275 ACAIAKLGGSSAFVGKFGDDEFGHMLVNILKQNNVNSEGCLFDKHARTALAFVTLKHDGE 454
ACA++KLGGSSAFVGKFGDDEFGHMLV ILKQN VN+EGCLFD+HARTALAFVTLK +GE
Sbjct: 251 ACAVSKLGGSSAFVGKFGDDEFGHMLVEILKQNGVNAEGCLFDQHARTALAFVTLKANGE 430
Query: 455 REFMFYRNPSADMLLTEAELDLGLVRRARVFHYGSISLISEPCRSXXXXXXXXXXXXGVL 634
REFMFYRNPSADMLLTEAEL+L L+RRAR+FHYGSI LI+EPCRS G+L
Sbjct: 431 REFMFYRNPSADMLLTEAELNLDLIRRARIFHYGSILLITEPCRSAHVAAMRAVKSGGIL 610
Query: 635 CSYDPNVRLPLWPSPDAAREGILSIWKEADFIKVSDDEVAFLTRGDANDEKNV 793
CS+DPNVRLPL PS AAR+GI++IW + ++ + + AFL RG EK +
Sbjct: 611 CSFDPNVRLPLLPSGQAARDGIMNIWMKPTSLR*ATMKWAFLPRGRPRPEKRL 769
Score = 240 bits (518), Expect = 2e-062
Identities = 123/226 (54%), Positives = 134/226 (59%)
Frame = -2 / -3
Query: 786 FSSLASPRVRKATSSSLTLMKSASFQMLRMPSRAASGDGQSGRRTLGS*EQSTPXXXXXX 607
FS P +KA L + QM MPSRAA +G+SGRRTLGS EQ P
Sbjct: 762 FSGRGLPLGKKAHFMVAHLNEVGFIQMFMMPSRAAWPEGKSGRRTLGSNEQRIPPDLTAR 583
Query: 606 XXXXXAERHGSEMSEMEP*WNTLXXXXXXXXXXXXXXXXXALGFL*NMNSRSPSCLSVTK 427
AER GS MS+M+P*W A G *N+NSRSP LSVTK
Sbjct: 582 MAATCAERQGSVMSKMDP*WKMRARRIRSRLSSASVSSMSADGLR*NINSRSPLALSVTK 403
Query: 426 ASAVRACLSNRHPSEFTLFCFRMFTNMCPNSSSPNLPTKAEDPPSLAMAQATLAGAPPGA 247
A AVRAC SNR PS T FCFR+ T+M PNSSSPNLPTKAE+PPSL AQATLAGAPPGA
Sbjct: 402 ARAVRACWSNRQPSALTPFCFRISTSM*PNSSSPNLPTKAEEPPSLETAQATLAGAPPGA 223
Query: 246 LTKXXXXXXXXXATSGTKSISISPNDTTRLLDXXXXXAPPSPRGAI 109
LTK ATSGTKSISISP +TTR A SPRGAI
Sbjct: 222 LTKPPDSASETPATSGTKSISISPKETTRPGAAAAAGATASPRGAI 85
Score = 85.4 bits (180), Expect(4) = 2e-036
Identities = 37/64 (57%), Positives = 46/64 (71%)
Frame = -1 / -2
Query: 721 GLLPDAEDALACGVGRRPEREAHVGVVGAEHARGLGCAHGGHVRRAARLGDERDGAVVEH 542
GL P+ DA+ G+ R EREAHVGV A+ L AHGGHVRRAA LGDE++G+VVE+
Sbjct: 697 GLHPNVHDAVPGGLARGQEREAHVGVERAKDTARLDSAHGGHVRRAAGLGDEQNGSVVEN 518
Query: 541 PGAP 530
G+P
Sbjct: 517 AGSP 506
Score = 55.1 bits (114), Expect(5) = 3e-027
Identities = 24/40 (60%), Positives = 30/40 (75%)
Frame = +1 / +1
Query: 361 PEAEQRELGGVPVRQARADGAGLRDAQARRGARVHVLQEP 480
PEAE+R+ G+ VR ARA G GLR AQ +R ARV+VL +P
Sbjct: 337 PEAERRQRRGLSVRPARAHGPGLRHAQGQRRARVYVLPQP 456
Score = 47.8 bits (98), Expect(4) = 2e-036
Identities = 19/23 (82%), Positives = 20/23 (86%)
Frame = -1 / -2
Query: 241 EAARLGQRQPGHVGDEVDQHLAE 173
EAA LG+R GHVGDEVDQHLAE
Sbjct: 217 EAAGLGERDAGHVGDEVDQHLAE 149
Score = 47.8 bits (98), Expect(5) = 3e-027
Identities = 18/24 (75%), Positives = 20/24 (83%)
Frame = +1 / +1
Query: 547 PLRLHLAHLRAVPLGAHGRHARSQ 618
PLR+H AH RA+PLGA GRHAR Q
Sbjct: 523 PLRIHFAHHRALPLGARGRHARCQ 594
Score = 46.9 bits (96), Expect(4) = 2e-036
Identities = 27/50 (54%), Positives = 28/50 (56%)
Frame = -1 / -2
Query: 478 VPVEHELALPVVLERHEGQRRPRVLVEQAPLRXXXXXXXXXXXXVPELVV 329
V VEH+LAL V LER EGQ R RVLVEQ L V ELVV
Sbjct: 454 VAVEHKLALAVGLERDEGQGRARVLVEQTALGVDAVLLQDLHQHVTELVV 305
Score = 36.8 bits (74), Expect(5) = 3e-027
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = +3 / +3
Query: 174 SARC*STSSPTWPGCR 221
SARC*STSSPTWP R
Sbjct: 150 SARC*STSSPTWPASR 197
Score = 35.4 bits (71), Expect(5) = 3e-027
Identities = 16/29 (55%), Positives = 17/29 (58%)
Frame = +2 / +1
Query: 716 EADFIKVSDDEVAFLTRGDANDEKNVLSL 802
EA FIKVSD EV LT+G A K L
Sbjct: 691 EAHFIKVSDHEVGLLTQGKATTRKTAFPL 777
Score = 29.0 bits (57), Expect(4) = 2e-036
Identities = 15/24 (62%), Positives = 17/24 (70%)
Frame = -2 / -1
Query: 786 FSSLASPRVRKATSSSLTLMKSAS 715
F +A P VR+ TS SLTLMK AS
Sbjct: 761 FLVVAFPWVRRPTSWSLTLMKWAS 690
Score = 27.6 bits (54), Expect(5) = 3e-027
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = +3 / +3
Query: 606 CAQPRPRACSAPTTPTCASRSGRRPTP 686
CA A +TPTCASRS R P
Sbjct: 582 CALSSRAVSFARSTPTCASRSCPRARP 662
>gb|CK124582.1|CK124582 BES1824109l04 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010L049 5-PRIME, mRNA sequence
Length = 795
Score = 377 bits (817), Expect = e-103
Identities = 155/214 (72%), Positives = 177/214 (82%)
Frame = +2 / +1
Query: 473 RNPSADMLLTEAELDLGLVRRARVFHYGSISLISEPCRSXXXXXXXXXXXXGVLCSYDPN 652
RNPSADMLLTEAEL+L L+RRAR+FHYGSISLI+EPCRS G+LCSYDPN
Sbjct: 1 RNPSADMLLTEAELNLDLIRRARIFHYGSISLITEPCRSAHVAAMRAAKSAGILCSYDPN 180
Query: 653 VRLPLWPSPDAAREGILSIWKEADFIKVSDDEVAFLTRGDANDEKNVLSLWFDGLKLLVV 832
VRLPLWPS AAR+GI+SIWKEADFIKVSDDEVAFLT+GDANDEKNVLSLWF+GLKLL+V
Sbjct: 181 VRLPLWPSAQAARDGIMSIWKEADFIKVSDDEVAFLTQGDANDEKNVLSLWFEGLKLLIV 360
Query: 833 TDGDKGCRYFTKDFKGSVPGFKVDTVDTTGAGDAFVGSLLVNVAKDDSIFHNEEKLREAL 1012
TDG+KGCRYFTKDFKGSVPG+ V+TVDTTGAGDAFVGSLLVNV+KDDSIF+NE KLRE L
Sbjct: 361 TDGEKGCRYFTKDFKGSVPGYSVNTVDTTGAGDAFVGSLLVNVSKDDSIFYNEAKLREVL 540
Query: 1013 KFSNACGAICTTKKGAIPALPTVATAQDLIAKAN 1114
+FS ++G+ P T +LI+K +
Sbjct: 541 QFSKRLRCHLHHQEGSHPGAAHTXTXLELISKGS 642
Score = 228 bits (493), Expect = 5e-059
Identities = 117/189 (61%), Positives = 123/189 (65%)
Frame = -2 / -2
Query: 1113 LALAMRSWAVATVGSAGMAPFLVVQMAPQALENLRASRSFSSLWKMESSLATLTRREPTK 934
L L M S V + G P + + EN S S +SL KMESSL TLTRREPTK
Sbjct: 641 LPLLMSSRXVXVWAAPGWLPSWWCRWHRKRFENCSTSLSLASL*KMESSLETLTRREPTK 462
Query: 933 ASPAPVVSTVSTLKPGTLPLKSLVKYLHXXXXXXXXXXXXXSNHRDSTFFSSLASPRVRK 754
ASPAPVVSTV T PGT PLKSLVKYLH SN R+STFFSSLASP VRK
Sbjct: 461 ASPAPVVSTVLTE*PGTEPLKSLVKYLHPFSPSVTMSSLRPSNQRESTFFSSLASPWVRK 282
Query: 753 ATSSSLTLMKSASFQMLRMPSRAASGDGQSGRRTLGS*EQSTPXXXXXXXXXXXAERHGS 574
ATSSSLTLMKSASFQML MPSRAA +GQSGRRTLGS EQ P AER GS
Sbjct: 281 ATSSSLTLMKSASFQMLMMPSRAAWAEGQSGRRTLGSYEQRMPADLAARMAATCAERQGS 102
Query: 573 EMSEMEP*W 547
MSEMEP*W
Sbjct: 101 VMSEMEP*W 75
Score = 206 bits (445), Expect(2) = 4e-058
Identities = 91/118 (77%), Positives = 99/118 (83%)
Frame = -1 / -1
Query: 886 HAALEVLGEVPASLVPVGDDEQLEPVKPQGQHVLLVVGVPAREEGHLVVADLDEVGLLPD 707
H ALEVLGEVPASL+ VGDDEQLE ++P+G+HVLLVVGV EEGHL+VA LDEVGLLPD
Sbjct: 414 HGALEVLGEVPASLLAVGDDEQLEALEPEGEHVLLVVGVALGEEGHLIVAHLDEVGLLPD 235
Query: 706 AEDALACGVGRRPEREAHVGVVGAEHARGLGCAHGGHVRRAARLGDERDGAVVEHPGA 533
A DA+A G+GR PEREAHVGVV AE A LG AHGG VRRAA LGDERDGAVVE GA
Sbjct: 234 AHDAVAGGLGRGPEREAHVGVVRAEDAGRLGSAHGGDVRRAAGLGDERDGAVVEDAGA 61
Score = 48.3 bits (99), Expect(4) = 4e-022
Identities = 20/28 (71%), Positives = 22/28 (78%)
Frame = +1 / +3
Query: 535 RQGVPLRLHLAHLRAVPLGAHGRHARSQ 618
R +PLRLHLAH RA+PLGA RHAR Q
Sbjct: 63 RPHLPLRLHLAHHRALPLGARRRHARCQ 146
Score = 46.0 bits (94), Expect(4) = 4e-022
Identities = 17/22 (77%), Positives = 18/22 (81%)
Frame = +1 / +1
Query: 1012 QVLQRLRRHLHHQEGRHPGAAH 1077
Q +RLR HLHHQEG HPGAAH
Sbjct: 541 QFSKRLRCHLHHQEGSHPGAAH 606
Score = 45.1 bits (92), Expect(4) = 4e-022
Identities = 19/27 (70%), Positives = 19/27 (70%)
Frame = +3 / +2
Query: 606 CAQPRPRACSAPTTPTCASRSGRRPTP 686
CA P A SA TTPTCASRSG RP P
Sbjct: 134 CALPSRPASSARTTPTCASRSGPRPRP 214
Score = 43.2 bits (88), Expect(2) = 4e-058
Identities = 18/23 (78%), Positives = 19/23 (82%)
Frame = -2 / -1
Query: 1077 VGSAGMAPFLVVQMAPQALENLR 1009
VGS GMAPFLVVQMAPQA L+
Sbjct: 606 VGSPGMAPFLVVQMAPQAFRELQ 538
Score = 28.1 bits (55), Expect(4) = 4e-022
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +1 / +3
Query: 1081 RHRPGPHRQGQ 1113
RHRPG H+QGQ
Sbjct: 609 RHRPGAHQQGQ 641
>gb|BF267991.2|BF267991 HV_CEa0019I11f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0019I11f, mRNA sequence
Length = 803
Score = 318 bits (688), Expect(2) = e-102
Identities = 133/165 (80%), Positives = 145/165 (87%)
Frame = +2 / +2
Query: 95 SKRDQMAPLGDGGXXXXXXSNNLVVSFGEMLIDFVPDVAGLSLAESGGFVKAPGGAPANV 274
S+ MAPLGD + LVV FGEMLIDFVPDVAG+SLAESGGFVKAPGGAPANV
Sbjct: 71 SQEPPMAPLGDAVAPAAAAAPGLVVFFGEMLIDFVPDVAGVSLAESGGFVKAPGGAPANV 250
Query: 275 ACAIAKLGGSSAFVGKFGDDEFGHMLVNILKQNNVNSEGCLFDKHARTALAFVTLKHDGE 454
ACA++KLGGSSAFVGKFGDDEFGHMLV ILKQN VN+EGCLFD+HART LAFVTLK +GE
Sbjct: 251 ACAVSKLGGSSAFVGKFGDDEFGHMLVEILKQNGVNAEGCLFDQHARTGLAFVTLKANGE 430
Query: 455 REFMFYRNPSADMLLTEAELDLGLVRRARVFHYGSISLISEPCRS 589
REFMFYRNP ADMLLTEAEL+L L+RRAR+FHYGSISLI+EPCRS
Sbjct: 431 REFMFYRNPWADMLLTEAELNLDLIRRARIFHYGSISLITEPCRS 565
Score = 203 bits (438), Expect(2) = 5e-063
Identities = 99/160 (61%), Positives = 102/160 (63%)
Frame = -2 / -3
Query: 588 ERHGSEMSEMEP*WNTLXXXXXXXXXXXXXXXXXALGFL*NMNSRSPSCLSVTKASAVRA 409
ER GS MSEMEP*W A GF *NMNSRSP LSVTKA VRA
Sbjct: 564 ERQGSVMSEMEP*WKMRARRMRSRLSSASVSSMSAHGFR*NMNSRSPLALSVTKARPVRA 385
Query: 408 CLSNRHPSEFTLFCFRMFTNMCPNSSSPNLPTKAEDPPSLAMAQATLAGAPPGALTKXXX 229
C SNR PS T FCFR+ T+M PNSSSPNLPTKAE+PPSL AQATLAGAPPGALTK
Sbjct: 384 CWSNRQPSALTPFCFRISTSMWPNSSSPNLPTKAEEPPSLETAQATLAGAPPGALTKPPD 205
Query: 228 XXXXXXATSGTKSISISPNDTTRLLDXXXXXAPPSPRGAI 109
ATSGTKSISISP TTR A SPRGAI
Sbjct: 204 SASETPATSGTKSISISPKKTTRPGAAAAAGATASPRGAI 85
Score = 73.9 bits (155), Expect(2) = e-102
Identities = 31/63 (49%), Positives = 38/63 (60%)
Frame = +2 / +3
Query: 626 GVLCSYDPNVRLPLWPSPDAAREGILSIWKEADFIKVSDDEVAFLTRGDANDEKNVLSLW 805
GVLCSY+PNVRLP+W +GI + W+E FI+VSD E LT G + N L LW
Sbjct: 603 GVLCSYEPNVRLPVWAFAQGRPDGIKTNWEEGRFIQVSDIEGGLLTPGGRQRQNNRLFLW 782
Query: 806 FDG 814
G
Sbjct: 783 VRG 791
Score = 59.3 bits (123), Expect(2) = 5e-063
Identities = 28/65 (43%), Positives = 37/65 (56%)
Frame = -1 / -1
Query: 820 LEPVKPQGQHVLLVVGVPAREEGHLVVADLDEVGLLPDAEDALACGVGRRPEREAHVGVV 641
L P P+ Q V+L + P ++ L VA L++ L P DA+ +G P REAHVG V
Sbjct: 797 LRPPNPKEQTVILALASPWGKKAPLNVAHLNKAALFPIGLDAVRAALGEGPNREAHVGFV 618
Query: 640 GAEHA 626
GAE A
Sbjct: 617 GAEDA 603
Score = 57.4 bits (119), Expect(5) = 2e-029
Identities = 25/40 (62%), Positives = 30/40 (75%)
Frame = +1 / +1
Query: 361 PEAEQRELGGVPVRQARADGAGLRDAQARRGARVHVLQEP 480
PEAE+R+ G+ VR ARA G GLR AQ +R ARVHVL +P
Sbjct: 337 PEAERRQRRGLSVRPARAHGPGLRHAQGQRRARVHVLPKP 456
Score = 53.8 bits (111), Expect(4) = 6e-034
Identities = 28/59 (47%), Positives = 34/59 (57%)
Frame = -2 / -2
Query: 801 RDSTFFSSLASPRVRKATSSSLTLMKSASFQMLRMPSRAASGDGQSGRRTLGS*EQSTP 625
R+ F P VR+ S SLT +K S Q++ MPS Q+GRRTLGS*EQ TP
Sbjct: 778 RNRRLFWRWRPPGVRRPPSMSLT*IKRPSSQLVLMPSGRPWAKAQTGRRTLGS*EQRTP 602
Score = 50.1 bits (103), Expect(4) = 6e-034
Identities = 21/30 (70%), Positives = 23/30 (76%)
Frame = -1 / -2
Query: 622 GLGCAHGGHVRRAARLGDERDGAVVEHPGA 533
GLG AH G+V R A LGDERDGAVVE G+
Sbjct: 598 GLGSAHDGNVXRTAGLGDERDGAVVEDAGS 509
Score = 49.2 bits (101), Expect(4) = 6e-034
Identities = 28/50 (56%), Positives = 28/50 (56%)
Frame = -1 / -2
Query: 478 VPVEHELALPVVLERHEGQRRPRVLVEQAPLRXXXXXXXXXXXXVPELVV 329
V VEHELAL V LER EGQ R RVLVEQ L V ELVV
Sbjct: 454 VSVEHELALAVGLERDEGQARARVLVEQTALGVDAVLLQDLHQHVAELVV 305
Score = 47.8 bits (98), Expect(4) = 6e-034
Identities = 19/23 (82%), Positives = 20/23 (86%)
Frame = -1 / -2
Query: 241 EAARLGQRQPGHVGDEVDQHLAE 173
EAA LG+R GHVGDEVDQHLAE
Sbjct: 217 EAAGLGERDAGHVGDEVDQHLAE 149
Score = 45.1 bits (92), Expect(5) = 2e-029
Identities = 18/25 (72%), Positives = 20/25 (80%)
Frame = +1 / +1
Query: 544 VPLRLHLAHLRAVPLGAHGRHARSQ 618
+PLRLHLAH RA+P GA RHAR Q
Sbjct: 520 LPLRLHLAHHRALPFGARCRHARCQ 594
Score = 38.2 bits (77), Expect(5) = 2e-029
Identities = 22/51 (43%), Positives = 25/51 (49%)
Frame = +2 / +1
Query: 671 PSPDAAREGILSIWKEADFIKVSDDEVAFLTRGDANDEKNVLSLWFDGLKL 823
PSP AA I K A + + AFL +GDAN V S F GLKL
Sbjct: 649 PSPKAALTASRPIGKRAALFR*ATLRGAFLPQGDANARITVCSFGFGGLKL 801
Score = 36.8 bits (74), Expect(5) = 2e-029
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = +3 / +3
Query: 174 SARC*STSSPTWPGCR 221
SARC*STSSPTWP R
Sbjct: 150 SARC*STSSPTWPASR 197
Score = 32.7 bits (65), Expect(5) = 2e-029
Identities = 13/18 (72%), Positives = 13/18 (72%)
Frame = +3 / +1
Query: 627 ACSAPTTPTCASRSGRRP 680
A SAPT PTCASR G P
Sbjct: 604 ASSAPTNPTCASRFGPSP 657
>gb|BI959942.1|BI959942 HVSMEn0022H23f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0022H23f, mRNA sequence
Length = 654
Score = 369 bits (801), Expect = e-101
Identities = 153/197 (77%), Positives = 166/197 (84%)
Frame = +2 / +2
Query: 95 SKRDQMAPLGDGGXXXXXXSNNLVVSFGEMLIDFVPDVAGLSLAESGGFVKAPGGAPANV 274
S+ MAPLGD + LVVSFGEMLIDFVPDVAG+SLAESGGFVKAPGGAPANV
Sbjct: 62 SQEPPMAPLGDAVAPAAAAAPGLVVSFGEMLIDFVPDVAGVSLAESGGFVKAPGGAPANV 241
Query: 275 ACAIAKLGGSSAFVGKFGDDEFGHMLVNILKQNNVNSEGCLFDKHARTALAFVTLKHDGE 454
ACA++KLGGSSAFVGKFGDDEFGHMLV ILKQN VN+EGCLFD+HARTALAFVTLK +GE
Sbjct: 242 ACAVSKLGGSSAFVGKFGDDEFGHMLVEILKQNGVNAEGCLFDQHARTALAFVTLKANGE 421
Query: 455 REFMFYRNPSADMLLTEAELDLGLVRRARVFHYGSISLISEPCRSXXXXXXXXXXXXGVL 634
REFMFYRNPSADMLLTEAEL+L L+RRAR+FHYGSISLI+EPCRS G+L
Sbjct: 422 REFMFYRNPSADMLLTEAELNLDLIRRARIFHYGSISLITEPCRSAHVAAMRAAKSAGIL 601
Query: 635 CSYDPNVRLPLWPSPDA 685
CSYDPNVRLPLWPS A
Sbjct: 602 CSYDPNVRLPLWPSAQA 652
Score = 230 bits (497), Expect = 1e-059
Identities = 114/192 (59%), Positives = 119/192 (61%)
Frame = -2 / -1
Query: 684 ASGDGQSGRRTLGS*EQSTPXXXXXXXXXXXAERHGSEMSEMEP*WNTLXXXXXXXXXXX 505
A +GQSGRRTLGS EQ P AER GS MSEMEP*W
Sbjct: 651 AWAEGQSGRRTLGSYEQRMPADLAARMAATCAERQGSVMSEMEP*WKMRARRMRSRLSSA 472
Query: 504 XXXXXXALGFL*NMNSRSPSCLSVTKASAVRACLSNRHPSEFTLFCFRMFTNMCPNSSSP 325
A G *NMNSRSP LSVTKA AVRAC SNR PS T FCFR+ T+M PNSSSP
Sbjct: 471 SVSSMSADGLR*NMNSRSPLALSVTKARAVRACWSNRQPSALTPFCFRISTSMWPNSSSP 292
Query: 324 NLPTKAEDPPSLAMAQATLAGAPPGALTKXXXXXXXXXATSGTKSISISPNDTTRLLDXX 145
NLPTKAE+PPSL AQATLAGAPPGALTK ATSGTKSISISP +TTR
Sbjct: 291 NLPTKAEEPPSLETAQATLAGAPPGALTKPPDSASDTPATSGTKSISISPKETTRPGAAA 112
Query: 144 XXXAPPSPRGAI 109
A SPRGAI
Sbjct: 111 AAGATASPRGAI 76
Score = 88.1 bits (186), Expect(3) = 6e-036
Identities = 39/51 (76%), Positives = 41/51 (80%)
Frame = -1 / -3
Query: 685 GVGRRPEREAHVGVVGAEHARGLGCAHGGHVRRAARLGDERDGAVVEHPGA 533
G+GR PEREAHVGVV AE A LG AHGG VRRAA LGDERDGAVVE G+
Sbjct: 652 GLGRGPEREAHVGVVRAEDAGRLGSAHGGDVRRAAGLGDERDGAVVEDAGS 500
Score = 61.6 bits (128), Expect(4) = 3e-031
Identities = 26/40 (65%), Positives = 31/40 (77%)
Frame = +1 / +1
Query: 361 PEAEQRELGGVPVRQARADGAGLRDAQARRGARVHVLQEP 480
PEAE+R+ G+PVR ARA G GLR AQ +R ARVHVL +P
Sbjct: 328 PEAERRQRRGLPVRPARAHGPGLRHAQGQRRARVHVLPQP 447
Score = 51.5 bits (106), Expect(3) = 6e-036
Identities = 20/23 (86%), Positives = 21/23 (91%)
Frame = -1 / -3
Query: 241 EAARLGQRQPGHVGDEVDQHLAE 173
EAA LG+R PGHVGDEVDQHLAE
Sbjct: 208 EAAGLGERHPGHVGDEVDQHLAE 140
Score = 50.6 bits (104), Expect(3) = 6e-036
Identities = 29/50 (58%), Positives = 29/50 (58%)
Frame = -1 / -3
Query: 478 VPVEHELALPVVLERHEGQRRPRVLVEQAPLRXXXXXXXXXXXXVPELVV 329
V VEHELAL V LER EGQ R RVLVEQA L V ELVV
Sbjct: 445 VAVEHELALAVGLERDEGQGRARVLVEQAALGVDAVLLQDLHQHVAELVV 296
Score = 47.3 bits (97), Expect(4) = 3e-031
Identities = 19/25 (76%), Positives = 21/25 (84%)
Frame = +1 / +1
Query: 544 VPLRLHLAHLRAVPLGAHGRHARSQ 618
+PLRLHLAH RA+PLGA RHAR Q
Sbjct: 511 LPLRLHLAHHRALPLGARRRHARCQ 585
Score = 45.1 bits (92), Expect(4) = 3e-031
Identities = 19/27 (70%), Positives = 19/27 (70%)
Frame = +3 / +3
Query: 606 CAQPRPRACSAPTTPTCASRSGRRPTP 686
CA P A SA TTPTCASRSG RP P
Sbjct: 573 CALPSRPASSARTTPTCASRSGPRPRP 653
Score = 44.1 bits (90), Expect(4) = 3e-031
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +3 / +3
Query: 174 SARC*STSSPTWPGCR 221
SARC*STSSPTWPGCR
Sbjct: 141 SARC*STSSPTWPGCR 188
>gb|BI959226.1|BI959226 HVSMEn0018L24f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0018L24f, mRNA sequence
Length = 646
Score = 368 bits (798), Expect = e-101
Identities = 152/194 (78%), Positives = 165/194 (85%)
Frame = +2 / +3
Query: 95 SKRDQMAPLGDGGXXXXXXSNNLVVSFGEMLIDFVPDVAGLSLAESGGFVKAPGGAPANV 274
S+ MAPLGD + LVVSFGEMLIDFVPDVAG+SLAESGGFVKAPGGAPANV
Sbjct: 63 SQEPPMAPLGDAVAPAAAAAPGLVVSFGEMLIDFVPDVAGVSLAESGGFVKAPGGAPANV 242
Query: 275 ACAIAKLGGSSAFVGKFGDDEFGHMLVNILKQNNVNSEGCLFDKHARTALAFVTLKHDGE 454
ACA++KLGGSSAFVGKFGDDEFGHMLV ILKQN VN+EGCLFD+HARTALAFVTLK +GE
Sbjct: 243 ACAVSKLGGSSAFVGKFGDDEFGHMLVEILKQNGVNAEGCLFDQHARTALAFVTLKANGE 422
Query: 455 REFMFYRNPSADMLLTEAELDLGLVRRARVFHYGSISLISEPCRSXXXXXXXXXXXXGVL 634
REFMFYRNPSADMLLTEAEL+L L+RRAR+FHYGSISLI+EPCRS G+L
Sbjct: 423 REFMFYRNPSADMLLTEAELNLDLIRRARIFHYGSISLITEPCRSAHVAAMRAAKSAGIL 602
Query: 635 CSYDPNVRLPLWPS 676
CSYDPNVRLPLWPS
Sbjct: 603 CSYDPNVRLPLWPS 644
Score = 230 bits (496), Expect = 2e-059
Identities = 113/189 (59%), Positives = 118/189 (62%)
Frame = -2 / -1
Query: 675 DGQSGRRTLGS*EQSTPXXXXXXXXXXXAERHGSEMSEMEP*WNTLXXXXXXXXXXXXXX 496
+GQSGRRTLGS EQ P AER GS MSEMEP*W
Sbjct: 643 EGQSGRRTLGSYEQRMPADLAARMAATCAERQGSVMSEMEP*WKMRARRMRSRLSSASVS 464
Query: 495 XXXALGFL*NMNSRSPSCLSVTKASAVRACLSNRHPSEFTLFCFRMFTNMCPNSSSPNLP 316
A G *NMNSRSP LSVTKA AVRAC SNR PS T FCFR+ T+M PNSSSPNLP
Sbjct: 463 SMSADGLR*NMNSRSPLALSVTKARAVRACWSNRQPSALTPFCFRISTSMWPNSSSPNLP 284
Query: 315 TKAEDPPSLAMAQATLAGAPPGALTKXXXXXXXXXATSGTKSISISPNDTTRLLDXXXXX 136
TKAE+PPSL AQATLAGAPPGALTK ATSGTKSISISP +TTR
Sbjct: 283 TKAEEPPSLETAQATLAGAPPGALTKPPDSASETPATSGTKSISISPKETTRPGAAAAAG 104
Query: 135 APPSPRGAI 109
A SPRGAI
Sbjct: 103 ATASPRGAI 77
Score = 82.2 bits (173), Expect(3) = 4e-033
Identities = 37/48 (77%), Positives = 38/48 (79%)
Frame = -1 / -3
Query: 676 RRPEREAHVGVVGAEHARGLGCAHGGHVRRAARLGDERDGAVVEHPGA 533
R PEREAHVGVV AE A LG AHGG VRRAA LGDERDGAVVE G+
Sbjct: 644 RGPEREAHVGVVRAEDAGRLGSAHGGDVRRAAGLGDERDGAVVEDAGS 501
Score = 61.6 bits (128), Expect(4) = 2e-027
Identities = 26/40 (65%), Positives = 31/40 (77%)
Frame = +1 / +2
Query: 361 PEAEQRELGGVPVRQARADGAGLRDAQARRGARVHVLQEP 480
PEAE+R+ G+PVR ARA G GLR AQ +R ARVHVL +P
Sbjct: 329 PEAERRQRRGLPVRPARAHGPGLRHAQGQRRARVHVLPQP 448
Score = 50.6 bits (104), Expect(3) = 4e-033
Identities = 29/50 (58%), Positives = 29/50 (58%)
Frame = -1 / -3
Query: 478 VPVEHELALPVVLERHEGQRRPRVLVEQAPLRXXXXXXXXXXXXVPELVV 329
V VEHELAL V LER EGQ R RVLVEQA L V ELVV
Sbjct: 446 VAVEHELALAVGLERDEGQGRARVLVEQAALGVDAVLLQDLHQHVAELVV 297
Score = 47.8 bits (98), Expect(3) = 4e-033
Identities = 19/23 (82%), Positives = 20/23 (86%)
Frame = -1 / -3
Query: 241 EAARLGQRQPGHVGDEVDQHLAE 173
EAA LG+R GHVGDEVDQHLAE
Sbjct: 209 EAAGLGERDAGHVGDEVDQHLAE 141
Score = 47.3 bits (97), Expect(4) = 2e-027
Identities = 19/25 (76%), Positives = 21/25 (84%)
Frame = +1 / +2
Query: 544 VPLRLHLAHLRAVPLGAHGRHARSQ 618
+PLRLHLAH RA+PLGA RHAR Q
Sbjct: 512 LPLRLHLAHHRALPLGARRRHARCQ 586
Score = 39.1 bits (79), Expect(4) = 2e-027
Identities = 17/24 (70%), Positives = 17/24 (70%)
Frame = +3 / +1
Query: 606 CAQPRPRACSAPTTPTCASRSGRR 677
CA P A SA TTPTCASRSG R
Sbjct: 574 CALPSRPASSARTTPTCASRSGPR 645
Score = 36.8 bits (74), Expect(4) = 2e-027
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = +3 / +1
Query: 174 SARC*STSSPTWPGCR 221
SARC*STSSPTWP R
Sbjct: 142 SARC*STSSPTWPASR 189
>gb|BI960113.1|BI960113 HVSMEn0023E13f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0023E13f, mRNA sequence
Length = 651
Score = 368 bits (798), Expect = e-101
Identities = 152/194 (78%), Positives = 165/194 (85%)
Frame = +2 / +2
Query: 95 SKRDQMAPLGDGGXXXXXXSNNLVVSFGEMLIDFVPDVAGLSLAESGGFVKAPGGAPANV 274
S+ MAPLGD + LVVSFGEMLIDFVPDVAG+SLAESGGFVKAPGGAPANV
Sbjct: 62 SQEPPMAPLGDAVAPAAAAAPGLVVSFGEMLIDFVPDVAGVSLAESGGFVKAPGGAPANV 241
Query: 275 ACAIAKLGGSSAFVGKFGDDEFGHMLVNILKQNNVNSEGCLFDKHARTALAFVTLKHDGE 454
ACA++KLGGSSAFVGKFGDDEFGHMLV ILKQN VN+EGCLFD+HARTALAFVTLK +GE
Sbjct: 242 ACAVSKLGGSSAFVGKFGDDEFGHMLVEILKQNGVNAEGCLFDQHARTALAFVTLKANGE 421
Query: 455 REFMFYRNPSADMLLTEAELDLGLVRRARVFHYGSISLISEPCRSXXXXXXXXXXXXGVL 634
REFMFYRNPSADMLLTEAEL+L L+RRAR+FHYGSISLI+EPCRS G+L
Sbjct: 422 REFMFYRNPSADMLLTEAELNLDLIRRARIFHYGSISLITEPCRSAHVAAMRAAKSAGIL 601
Query: 635 CSYDPNVRLPLWPS 676
CSYDPNVRLPLWPS
Sbjct: 602 CSYDPNVRLPLWPS 643
Score = 230 bits (496), Expect = 2e-059
Identities = 113/189 (59%), Positives = 118/189 (62%)
Frame = -2 / -1
Query: 675 DGQSGRRTLGS*EQSTPXXXXXXXXXXXAERHGSEMSEMEP*WNTLXXXXXXXXXXXXXX 496
+GQSGRRTLGS EQ P AER GS MSEMEP*W
Sbjct: 642 EGQSGRRTLGSYEQRMPADLAARMAATCAERQGSVMSEMEP*WKMRARRMRSRLSSASVS 463
Query: 495 XXXALGFL*NMNSRSPSCLSVTKASAVRACLSNRHPSEFTLFCFRMFTNMCPNSSSPNLP 316
A G *NMNSRSP LSVTKA AVRAC SNR PS T FCFR+ T+M PNSSSPNLP
Sbjct: 462 SMSADGLR*NMNSRSPLALSVTKARAVRACWSNRQPSALTPFCFRISTSMWPNSSSPNLP 283
Query: 315 TKAEDPPSLAMAQATLAGAPPGALTKXXXXXXXXXATSGTKSISISPNDTTRLLDXXXXX 136
TKAE+PPSL AQATLAGAPPGALTK ATSGTKSISISP +TTR
Sbjct: 282 TKAEEPPSLETAQATLAGAPPGALTKPPDSASETPATSGTKSISISPKETTRPGAAAAAG 103
Query: 135 APPSPRGAI 109
A SPRGAI
Sbjct: 102 ATASPRGAI 76
Score = 79.4 bits (167), Expect(3) = 3e-032
Identities = 36/50 (72%), Positives = 38/50 (76%)
Frame = -1 / -3
Query: 682 VGRRPEREAHVGVVGAEHARGLGCAHGGHVRRAARLGDERDGAVVEHPGA 533
+ R PER AHVGVV AE A LG AHGG VRRAA LGDERDGAVVE G+
Sbjct: 649 LXRGPERXAHVGVVRAEDAGRLGSAHGGDVRRAAGLGDERDGAVVEDAGS 500
Score = 61.6 bits (128), Expect(4) = 7e-027
Identities = 26/40 (65%), Positives = 31/40 (77%)
Frame = +1 / +1
Query: 361 PEAEQRELGGVPVRQARADGAGLRDAQARRGARVHVLQEP 480
PEAE+R+ G+PVR ARA G GLR AQ +R ARVHVL +P
Sbjct: 328 PEAERRQRRGLPVRPARAHGPGLRHAQGQRRARVHVLPQP 447
Score = 50.6 bits (104), Expect(3) = 3e-032
Identities = 29/50 (58%), Positives = 29/50 (58%)
Frame = -1 / -3
Query: 478 VPVEHELALPVVLERHEGQRRPRVLVEQAPLRXXXXXXXXXXXXVPELVV 329
V VEHELAL V LER EGQ R RVLVEQA L V ELVV
Sbjct: 445 VAVEHELALAVGLERDEGQGRARVLVEQAALGVDAVLLQDLHQHVAELVV 296
Score = 47.8 bits (98), Expect(3) = 3e-032
Identities = 19/23 (82%), Positives = 20/23 (86%)
Frame = -1 / -3
Query: 241 EAARLGQRQPGHVGDEVDQHLAE 173
EAA LG+R GHVGDEVDQHLAE
Sbjct: 208 EAAGLGERDAGHVGDEVDQHLAE 140
Score = 47.3 bits (97), Expect(4) = 7e-027
Identities = 19/25 (76%), Positives = 21/25 (84%)
Frame = +1 / +1
Query: 544 VPLRLHLAHLRAVPLGAHGRHARSQ 618
+PLRLHLAH RA+PLGA RHAR Q
Sbjct: 511 LPLRLHLAHHRALPLGARRRHARCQ 585
Score = 37.3 bits (75), Expect(4) = 7e-027
Identities = 16/24 (66%), Positives = 16/24 (66%)
Frame = +3 / +3
Query: 606 CAQPRPRACSAPTTPTCASRSGRR 677
CA P A SA TTPTCA RSG R
Sbjct: 573 CALPSRPASSARTTPTCAXRSGPR 644
Score = 36.8 bits (74), Expect(4) = 7e-027
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = +3 / +3
Query: 174 SARC*STSSPTWPGCR 221
SARC*STSSPTWP R
Sbjct: 141 SARC*STSSPTWPASR 188
>gb|BU995453.1|BU995453 HM10E21r HM Hordeum vulgare subsp. vulgare cDNA clone HM10E21
5-PRIME, mRNA sequence
Length = 650
Score = 366 bits (794), Expect = e-100
Identities = 151/193 (78%), Positives = 164/193 (84%)
Frame = +2 / +2
Query: 95 SKRDQMAPLGDGGXXXXXXSNNLVVSFGEMLIDFVPDVAGLSLAESGGFVKAPGGAPANV 274
S+ MAPLGD + LVVSFGEMLIDFVPDVAG+SLAESGGFVKAPGGAPANV
Sbjct: 71 SQEPPMAPLGDAVAPAAAAAPGLVVSFGEMLIDFVPDVAGVSLAESGGFVKAPGGAPANV 250
Query: 275 ACAIAKLGGSSAFVGKFGDDEFGHMLVNILKQNNVNSEGCLFDKHARTALAFVTLKHDGE 454
ACA++KLGGSSAFVGKFGDDEFGHMLV ILKQN VN+EGCLFD+HARTALAFVTLK +GE
Sbjct: 251 ACAVSKLGGSSAFVGKFGDDEFGHMLVEILKQNGVNAEGCLFDQHARTALAFVTLKANGE 430
Query: 455 REFMFYRNPSADMLLTEAELDLGLVRRARVFHYGSISLISEPCRSXXXXXXXXXXXXGVL 634
REFMFYRNPSADMLLTEAEL+L L+RRAR+FHYGSISLI+EPCRS G+L
Sbjct: 431 REFMFYRNPSADMLLTEAELNLDLIRRARIFHYGSISLITEPCRSAHVAAMRAAKSAGIL 610
Query: 635 CSYDPNVRLPLWP 673
CSYDPNVRLPLWP
Sbjct: 611 CSYDPNVRLPLWP 649
Score = 229 bits (494), Expect = 4e-059
Identities = 113/188 (60%), Positives = 117/188 (62%)
Frame = -2 / -3
Query: 672 GQSGRRTLGS*EQSTPXXXXXXXXXXXAERHGSEMSEMEP*WNTLXXXXXXXXXXXXXXX 493
GQSGRRTLGS EQ P AER GS MSEMEP*W
Sbjct: 648 GQSGRRTLGSYEQRMPADLAARMAATCAERQGSVMSEMEP*WKMRARRMRSRLSSASVSS 469
Query: 492 XXALGFL*NMNSRSPSCLSVTKASAVRACLSNRHPSEFTLFCFRMFTNMCPNSSSPNLPT 313
A G *NMNSRSP LSVTKA AVRAC SNR PS T FCFR+ T+M PNSSSPNLPT
Sbjct: 468 MSADGLR*NMNSRSPLALSVTKARAVRACWSNRQPSALTPFCFRISTSMWPNSSSPNLPT 289
Query: 312 KAEDPPSLAMAQATLAGAPPGALTKXXXXXXXXXATSGTKSISISPNDTTRLLDXXXXXA 133
KAE+PPSL AQATLAGAPPGALTK ATSGTKSISISP +TTR A
Sbjct: 288 KAEEPPSLETAQATLAGAPPGALTKPPDSASETPATSGTKSISISPKETTRPGAAAAAGA 109
Query: 132 PPSPRGAI 109
SPRGAI
Sbjct: 108 TASPRGAI 85
Score = 82.2 bits (173), Expect(3) = 4e-033
Identities = 37/46 (80%), Positives = 37/46 (80%)
Frame = -1 / -2
Query: 670 PEREAHVGVVGAEHARGLGCAHGGHVRRAARLGDERDGAVVEHPGA 533
PEREAHVGVV AE A LG AHGG VRRAA LGDERDGAVVE GA
Sbjct: 646 PEREAHVGVVRAEDAGRLGSAHGGDVRRAAGLGDERDGAVVEDAGA 509
Score = 61.6 bits (128), Expect(4) = 3e-027
Identities = 26/40 (65%), Positives = 31/40 (77%)
Frame = +1 / +1
Query: 361 PEAEQRELGGVPVRQARADGAGLRDAQARRGARVHVLQEP 480
PEAE+R+ G+PVR ARA G GLR AQ +R ARVHVL +P
Sbjct: 337 PEAERRQRRGLPVRPARAHGPGLRHAQGQRRARVHVLPQP 456
Score = 50.6 bits (104), Expect(3) = 4e-033
Identities = 29/50 (58%), Positives = 29/50 (58%)
Frame = -1 / -2
Query: 478 VPVEHELALPVVLERHEGQRRPRVLVEQAPLRXXXXXXXXXXXXVPELVV 329
V VEHELAL V LER EGQ R RVLVEQA L V ELVV
Sbjct: 454 VAVEHELALAVGLERDEGQGRARVLVEQAALGVDAVLLQDLHQHVAELVV 305
Score = 48.3 bits (99), Expect(4) = 3e-027
Identities = 20/28 (71%), Positives = 22/28 (78%)
Frame = +1 / +1
Query: 535 RQGVPLRLHLAHLRAVPLGAHGRHARSQ 618
R +PLRLHLAH RA+PLGA RHAR Q
Sbjct: 511 RPHLPLRLHLAHHRALPLGARRRHARCQ 594
Score = 47.8 bits (98), Expect(3) = 4e-033
Identities = 19/23 (82%), Positives = 20/23 (86%)
Frame = -1 / -2
Query: 241 EAARLGQRQPGHVGDEVDQHLAE 173
EAA LG+R GHVGDEVDQHLAE
Sbjct: 217 EAAGLGERDAGHVGDEVDQHLAE 149
Score = 37.7 bits (76), Expect(4) = 3e-027
Identities = 16/22 (72%), Positives = 16/22 (72%)
Frame = +3 / +3
Query: 606 CAQPRPRACSAPTTPTCASRSG 671
CA P A SA TTPTCASRSG
Sbjct: 582 CALPSRPASSARTTPTCASRSG 647
Score = 36.8 bits (74), Expect(4) = 3e-027
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = +3 / +3
Query: 174 SARC*STSSPTWPGCR 221
SARC*STSSPTWP R
Sbjct: 150 SARC*STSSPTWPASR 197
>gb|BM370819.2|BM370819 EBro04_SQ002_G06_R root, 3 week, salt-stressed, cv Optic, EBro04
Hordeum vulgare subsp. vulgare cDNA clone
EBro04_SQ002_G06 5', mRNA sequence
Length = 538
Score = 360 bits (781), Expect = 1e-098
Identities = 145/179 (81%), Positives = 159/179 (88%)
Frame = +2 / +2
Query: 332 DEFGHMLVNILKQNNVNSEGCLFDKHARTALAFVTLKHDGEREFMFYRNPSADMLLTEAE 511
DEFGHMLV ILKQN VN+EGCLFD+HARTALAFVTLK +GEREFMFYRNPSADMLLTEAE
Sbjct: 2 DEFGHMLVEILKQNGVNAEGCLFDQHARTALAFVTLKANGEREFMFYRNPSADMLLTEAE 181
Query: 512 LDLGLVRRARVFHYGSISLISEPCRSXXXXXXXXXXXXGVLCSYDPNVRLPLWPSPDAAR 691
L+L L+RRAR+FHYGSISLI+EPCRS G+LCSYDPNVRLPLWPS AAR
Sbjct: 182 LNLDLIRRARIFHYGSISLITEPCRSAHVAAMRAAKSAGILCSYDPNVRLPLWPSAQAAR 361
Query: 692 EGILSIWKEADFIKVSDDEVAFLTRGDANDEKNVLSLWFDGLKLLVVTDGDKGCRYFTK 868
+GI+SIWKEADFIKVSDDEVAFLT+GDANDEKNVLSLWF+GLKLL+VTD +KGC YFTK
Sbjct: 362 DGIMSIWKEADFIKVSDDEVAFLTQGDANDEKNVLSLWFEGLKLLIVTDREKGCMYFTK 538
Score = 216 bits (467), Expect = 2e-055
Identities = 107/179 (59%), Positives = 112/179 (62%)
Frame = -2 / -2
Query: 867 LVKYLHXXXXXXXXXXXXXSNHRDSTFFSSLASPRVRKATSSSLTLMKSASFQMLRMPSR 688
LVKY+H SN R+STFFSSLASP VRKATSSSLTLMKSASFQML MPSR
Sbjct: 537 LVKYMHPFSRSVTMSSLRPSNQRESTFFSSLASPWVRKATSSSLTLMKSASFQMLMMPSR 358
Query: 687 AASGDGQSGRRTLGS*EQSTPXXXXXXXXXXXAERHGSEMSEMEP*WNTLXXXXXXXXXX 508
AA +GQSGRRTLGS EQ P AER GS MSEMEP*W
Sbjct: 357 AAWAEGQSGRRTLGSYEQRMPADLAARMAATCAERQGSVMSEMEP*WKMRARRMRSRLSS 178
Query: 507 XXXXXXXALGFL*NMNSRSPSCLSVTKASAVRACLSNRHPSEFTLFCFRMFTNMCPNSS 331
A G *NMNSRSP LSVTKA AVRAC SNR PS T FCFR+ T+M PNSS
Sbjct: 177 ASVSSMSADGLR*NMNSRSPLALSVTKARAVRACWSNRQPSALTPFCFRISTSMWPNSS 1
Score = 191 bits (411), Expect(2) = 2e-056
Identities = 85/112 (75%), Positives = 93/112 (83%)
Frame = -1 / -1
Query: 868 LGEVPASLVPVGDDEQLEPVKPQGQHVLLVVGVPAREEGHLVVADLDEVGLLPDAEDALA 689
LGEV ASL+ VGDDEQLE ++P+G+HVLLVVGV EEGHL+VA LDEVGLLPDA DA+A
Sbjct: 538 LGEVHASLLAVGDDEQLEALEPEGEHVLLVVGVALGEEGHLIVAHLDEVGLLPDAHDAVA 359
Query: 688 CGVGRRPEREAHVGVVGAEHARGLGCAHGGHVRRAARLGDERDGAVVEHPGA 533
G+GR PEREAHVGVV AE A LG AHGG VRRAA LGDERDGAVVE GA
Sbjct: 358 GGLGRGPEREAHVGVVRAEDAGRLGSAHGGDVRRAAGLGDERDGAVVEDAGA 203
Score = 61.6 bits (128), Expect(3) = 1e-025
Identities = 26/40 (65%), Positives = 31/40 (77%)
Frame = +1 / +1
Query: 361 PEAEQRELGGVPVRQARADGAGLRDAQARRGARVHVLQEP 480
PEAE+R+ G+PVR ARA G GLR AQ +R ARVHVL +P
Sbjct: 31 PEAERRQRRGLPVRPARAHGPGLRHAQGQRRARVHVLPQP 150
Score = 49.6 bits (102), Expect(2) = 2e-056
Identities = 24/31 (77%), Positives = 24/31 (77%)
Frame = -1 / -1
Query: 478 VPVEHELALPVVLERHEGQRRPRVLVEQAPL 386
V VEHELAL V LER EGQ R RVLVEQA L
Sbjct: 148 VAVEHELALAVGLERDEGQGRARVLVEQAAL 56
Score = 48.3 bits (99), Expect(3) = 1e-025
Identities = 20/28 (71%), Positives = 22/28 (78%)
Frame = +1 / +1
Query: 535 RQGVPLRLHLAHLRAVPLGAHGRHARSQ 618
R +PLRLHLAH RA+PLGA RHAR Q
Sbjct: 205 RPHLPLRLHLAHHRALPLGARRRHARCQ 288
Score = 45.1 bits (92), Expect(3) = 1e-025
Identities = 19/27 (70%), Positives = 19/27 (70%)
Frame = +3 / +3
Query: 606 CAQPRPRACSAPTTPTCASRSGRRPTP 686
CA P A SA TTPTCASRSG RP P
Sbjct: 276 CALPSRPASSARTTPTCASRSGPRPRP 356
>gb|BU994746.1|BU994746 HM08B05r HM Hordeum vulgare subsp. vulgare cDNA clone HM08B05
5-PRIME, mRNA sequence
Length = 655
Score = 358 bits (776), Expect = 5e-098
Identities = 149/191 (78%), Positives = 162/191 (84%)
Frame = +2 / +2
Query: 95 SKRDQMAPLGDGGXXXXXXSNNLVVSFGEMLIDFVPDVAGLSLAESGGFVKAPGGAPANV 274
S+ MAPLGD + LVVSFGEMLIDFVPDVAG+SLAESGGFVKAPGGAPANV
Sbjct: 83 SQEPPMAPLGDAVAPAAAAAPGLVVSFGEMLIDFVPDVAGVSLAESGGFVKAPGGAPANV 262
Query: 275 ACAIAKLGGSSAFVGKFGDDEFGHMLVNILKQNNVNSEGCLFDKHARTALAFVTLKHDGE 454
ACA++KLGGSSAFVGKFGDDEFGHMLV ILKQN VN+EGCLFD+HARTALAFVTLK +GE
Sbjct: 263 ACAVSKLGGSSAFVGKFGDDEFGHMLVEILKQNGVNAEGCLFDQHARTALAFVTLKANGE 442
Query: 455 REFMFYRNPSADMLLTEAELDLGLVRRARVFHYGSISLISEPCRSXXXXXXXXXXXXGVL 634
REFMFYRNPSADMLLTEAEL+L L+RRAR+FHYGSISLI+EPCRS G+L
Sbjct: 443 REFMFYRNPSADMLLTEAELNLDLIRRARIFHYGSISLITEPCRSAHVAAMRAAKSAGIL 622
Query: 635 CSYDPNVRLPL 667
CSYDPNVRLPL
Sbjct: 623 CSYDPNVRLPL 655
Score = 224 bits (483), Expect = 1e-057
Identities = 111/186 (59%), Positives = 115/186 (61%)
Frame = -2 / -2
Query: 666 SGRRTLGS*EQSTPXXXXXXXXXXXAERHGSEMSEMEP*WNTLXXXXXXXXXXXXXXXXX 487
SGRRTLGS EQ P AER GS MSEMEP*W
Sbjct: 654 SGRRTLGSYEQRMPADLAARMAATCAERQGSVMSEMEP*WKMRARRMRSRLSSASVSSMS 475
Query: 486 ALGFL*NMNSRSPSCLSVTKASAVRACLSNRHPSEFTLFCFRMFTNMCPNSSSPNLPTKA 307
A G *NMNSRSP LSVTKA AVRAC SNR PS T FCFR+ T+M PNSSSPNLPTKA
Sbjct: 474 ADGLR*NMNSRSPLALSVTKARAVRACWSNRQPSALTPFCFRISTSMWPNSSSPNLPTKA 295
Query: 306 EDPPSLAMAQATLAGAPPGALTKXXXXXXXXXATSGTKSISISPNDTTRLLDXXXXXAPP 127
E+PPSL AQATLAGAPPGALTK ATSGTKSISISP +TTR A
Sbjct: 294 EEPPSLETAQATLAGAPPGALTKPPDSASETPATSGTKSISISPKETTRPGAAAAAGATA 115
Query: 126 SPRGAI 109
SPRGAI
Sbjct: 114 SPRGAI 97
Score = 79.0 bits (166), Expect(3) = 4e-032
Identities = 36/45 (80%), Positives = 36/45 (80%)
Frame = -1 / -1
Query: 667 EREAHVGVVGAEHARGLGCAHGGHVRRAARLGDERDGAVVEHPGA 533
EREAHVGVV AE A LG AHGG VRRAA LGDERDGAVVE GA
Sbjct: 655 EREAHVGVVRAEDAGRLGSAHGGDVRRAAGLGDERDGAVVEDAGA 521
Score = 61.6 bits (128), Expect(4) = 6e-026
Identities = 26/40 (65%), Positives = 31/40 (77%)
Frame = +1 / +1
Query: 361 PEAEQRELGGVPVRQARADGAGLRDAQARRGARVHVLQEP 480
PEAE+R+ G+PVR ARA G GLR AQ +R ARVHVL +P
Sbjct: 349 PEAERRQRRGLPVRPARAHGPGLRHAQGQRRARVHVLPQP 468
Score = 50.6 bits (104), Expect(3) = 4e-032
Identities = 29/50 (58%), Positives = 29/50 (58%)
Frame = -1 / -1
Query: 478 VPVEHELALPVVLERHEGQRRPRVLVEQAPLRXXXXXXXXXXXXVPELVV 329
V VEHELAL V LER EGQ R RVLVEQA L V ELVV
Sbjct: 466 VAVEHELALAVGLERDEGQGRARVLVEQAALGVDAVLLQDLHQHVAELVV 317
Score = 48.3 bits (99), Expect(4) = 6e-026
Identities = 20/28 (71%), Positives = 22/28 (78%)
Frame = +1 / +1
Query: 535 RQGVPLRLHLAHLRAVPLGAHGRHARSQ 618
R +PLRLHLAH RA+PLGA RHAR Q
Sbjct: 523 RPHLPLRLHLAHHRALPLGARRRHARCQ 606
Score = 47.8 bits (98), Expect(3) = 4e-032
Identities = 19/23 (82%), Positives = 20/23 (86%)
Frame = -1 / -1
Query: 241 EAARLGQRQPGHVGDEVDQHLAE 173
EAA LG+R GHVGDEVDQHLAE
Sbjct: 229 EAAGLGERDAGHVGDEVDQHLAE 161
Score = 36.8 bits (74), Expect(4) = 6e-026
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = +3 / +3
Query: 174 SARC*STSSPTWPGCR 221
SARC*STSSPTWP R
Sbjct: 162 SARC*STSSPTWPASR 209
Score = 33.1 bits (66), Expect(4) = 6e-026
Identities = 14/20 (70%), Positives = 14/20 (70%)
Frame = +3 / +3
Query: 606 CAQPRPRACSAPTTPTCASR 665
CA P A SA TTPTCASR
Sbjct: 594 CALPSRPASSARTTPTCASR 653
>gb|BU995659.1|BU995659 HM10P06r HM Hordeum vulgare subsp. vulgare cDNA clone HM10P06
5-PRIME, mRNA sequence
Length = 653
Score = 358 bits (776), Expect = 5e-098
Identities = 147/178 (82%), Positives = 161/178 (90%)
Frame = +2 / +3
Query: 161 LVVSFGEMLIDFVPDVAGLSLAESGGFVKAPGGAPANVACAIAKLGGSSAFVGKFGDDEF 340
LVVSFGEMLIDFVP+VAG+SLAESGGFVKAPGGAPANVACAI+KLGGSSAFVGKFGDDEF
Sbjct: 120 LVVSFGEMLIDFVPNVAGVSLAESGGFVKAPGGAPANVACAISKLGGSSAFVGKFGDDEF 299
Query: 341 GHMLVNILKQNNVNSEGCLFDKHARTALAFVTLKHDGEREFMFYRNPSADMLLTEAELDL 520
GHMLV+ILKQ+ VN+EGCLFD+HARTALAFVTLK +GEREFMFYRNPSADMLLTEAEL+L
Sbjct: 300 GHMLVDILKQSGVNAEGCLFDQHARTALAFVTLKSNGEREFMFYRNPSADMLLTEAELNL 479
Query: 521 GLVRRARVFHYGSISLISEPCRSXXXXXXXXXXXXGVLCSYDPNVRLPLWPSPDAARE 694
L+RRAR+FHYGSISLI+EPCRS G+LCSYDPNVRLPLWPS AAR+
Sbjct: 480 DLIRRARIFHYGSISLITEPCRSAHVAAMRAAKSAGILCSYDPNVRLPLWPSAQAARD 653
Score = 166 bits (358), Expect(2) = 2e-061
Identities = 76/107 (71%), Positives = 81/107 (75%)
Frame = -2 / -2
Query: 480 GFL*NMNSRSPSCLSVTKASAVRACLSNRHPSEFTLFCFRMFTNMCPNSSSPNLPTKAED 301
G *NMNSRSP L VTKA AVRAC S R PS FT CFRM T+M PNSSSPNLPTKAE+
Sbjct: 439 GLR*NMNSRSPLDLRVTKARAVRACWSKRQPSAFTPLCFRMSTSMWPNSSSPNLPTKAEE 260
Query: 300 PPSLAMAQATLAGAPPGALTKXXXXXXXXXATSGTKSISISPNDTTR 160
PPSL +AQATLAGAPPGALTK AT GTKSI+ISP +TTR
Sbjct: 259 PPSLEIAQATLAGAPPGALTKPPDSASETPATFGTKSINISPKETTR 119
Score = 90.4 bits (191), Expect(2) = 2e-061
Identities = 41/54 (75%), Positives = 43/54 (79%)
Frame = -1 / -1
Query: 694 LACGVGRRPEREAHVGVVGAEHARGLGCAHGGHVRRAARLGDERDGAVVEHPGA 533
+A G+G RPEREAHVGVVGAE A GLG AHGG V AA LGDERDGAVVE GA
Sbjct: 653 VAGGLGGRPEREAHVGVVGAEDAGGLGGAHGGDVGGAAGLGDERDGAVVEDAGA 492
Score = 65.7 bits (137), Expect(3) = 3e-025
Identities = 31/49 (63%), Positives = 32/49 (65%)
Frame = -2 / -2
Query: 693 SRAASGDGQSGRRTLGS*EQSTPXXXXXXXXXXXAERHGSEMSEMEP*W 547
SRAA +GQSGRRTLGS*EQ P AER GS MSEMEP*W
Sbjct: 652 SRAAWAEGQSGRRTLGS*EQRMPADLAARMAATWAERQGSVMSEMEP*W 506
Score = 64.3 bits (134), Expect(4) = 1e-027
Identities = 27/43 (62%), Positives = 32/43 (74%)
Frame = +1 / +2
Query: 358 HPEAEQRELGGVPVRQARADGAGLRDAQARRGARVHVLQEPER 486
HPEAE+RE GG+P+R ARA GLR Q +R ARVHVL +P R
Sbjct: 317 HPEAERRERGGLPLRPARAHRPGLRHPQVQRRARVHVLPQPVR 445
Score = 50.6 bits (104), Expect(4) = 1e-027
Identities = 20/27 (74%), Positives = 20/27 (74%)
Frame = +3 / +1
Query: 606 CAQPRPRACSAPTTPTCASRSGRRPTP 686
CA P P A SAPTTPTCASRSG P P
Sbjct: 565 CAPPSPPASSAPTTPTCASRSGLPPRP 645
Score = 46.4 bits (95), Expect(3) = 3e-025
Identities = 27/50 (54%), Positives = 28/50 (56%)
Frame = -1 / -1
Query: 478 VPVEHELALPVVLERHEGQRRPRVLVEQAPLRXXXXXXXXXXXXVPELVV 329
V VEHELAL V LE EGQ RVLVE+A LR V ELVV
Sbjct: 437 VAVEHELALAVGLEGDEGQGGARVLVEEAALRVHAALLQDVHQHVAELVV 288
Score = 42.3 bits (86), Expect(4) = 1e-027
Identities = 18/28 (64%), Positives = 20/28 (71%)
Frame = +1 / +2
Query: 535 RQGVPLRLHLAHLRAVPLGAHGRHARSQ 618
R +PLRLHLAH RA+PL RHAR Q
Sbjct: 494 RPHLPLRLHLAHHRALPLRPRRRHARRQ 577
Score = 41.8 bits (85), Expect(3) = 3e-025
Identities = 16/23 (69%), Positives = 19/23 (82%)
Frame = -1 / -1
Query: 241 EAARLGQRQPGHVGDEVDQHLAE 173
EA+RLG+R GHV +EVDQHL E
Sbjct: 200 EASRLGERDAGHVWNEVDQHLTE 132
Score = 28.6 bits (56), Expect(4) = 1e-027
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +3 / +1
Query: 174 SARC*STSSPTWPGCR 221
S RC*STS TWP R
Sbjct: 133 SVRC*STSFQTWPASR 180
>gb|BQ469455.1|BQ469455 HM04M12r HM Hordeum vulgare subsp. vulgare cDNA clone HM04M12
5-PRIME, mRNA sequence
Length = 620
Score = 352 bits (762), Expect = 4e-096
Identities = 147/184 (79%), Positives = 160/184 (86%)
Frame = +2 / +2
Query: 110 MAPLGDGGXXXXXXSNNLVVSFGEMLIDFVPDVAGLSLAESGGFVKAPGGAPANVACAIA 289
MAPLGD ++ LVVSFGEMLIDFVPDVAG+SLAESGGFVKAPGGAPANVACAI+
Sbjct: 68 MAPLGDVVPPAAAAASGLVVSFGEMLIDFVPDVAGVSLAESGGFVKAPGGAPANVACAIS 247
Query: 290 KLGGSSAFVGKFGDDEFGHMLVNILKQNNVNSEGCLFDKHARTALAFVTLKHDGEREFMF 469
KLGGSSAFVGKFGDDEFGHMLV+ILKQN VN+EGCLFD+HARTALAFVTLK +GEREFMF
Sbjct: 248 KLGGSSAFVGKFGDDEFGHMLVDILKQNGVNAEGCLFDQHARTALAFVTLKTNGEREFMF 427
Query: 470 YRNPSADMLLTEAELDLGLVRRARVFHYGSISLISEPCRSXXXXXXXXXXXXGVLCSYDP 649
YRNPSADMLLTEAEL+L L+RRAR+FHYGSISLI+EPCRS G+LCSYDP
Sbjct: 428 YRNPSADMLLTEAELNLDLIRRARIFHYGSISLITEPCRSAHVAAMRAAKSAGILCSYDP 607
Query: 650 NVRL 661
NVRL
Sbjct: 608 NVRL 619
Score = 191 bits (412), Expect(2) = 1e-061
Identities = 88/124 (70%), Positives = 91/124 (73%)
Frame = -2 / -3
Query: 480 GFL*NMNSRSPSCLSVTKASAVRACLSNRHPSEFTLFCFRMFTNMCPNSSSPNLPTKAED 301
G *NMNSRSP LSVTKASAVRAC S R PS FT FCFRM T+MCPNSSSPNLPTKA++
Sbjct: 438 GLR*NMNSRSPLVLSVTKASAVRACWSKRQPSAFTPFCFRMSTSMCPNSSSPNLPTKADE 259
Query: 300 PPSLAMAQATLAGAPPGALTKXXXXXXXXXATSGTKSISISPNDTTRLLDXXXXXAPPSP 121
PPSL MA ATLAGAPPGALTK ATSGTKSISISP DTTR SP
Sbjct: 258 PPSLEMAHATLAGAPPGALTKPPDSARETPATSGTKSISISPKDTTRPDAAAAAGGTTSP 79
Query: 120 RGAI 109
RGAI
Sbjct: 78 RGAI 67
Score = 66.6 bits (139), Expect(2) = 1e-061
Identities = 31/42 (73%), Positives = 31/42 (73%)
Frame = -1 / -2
Query: 661 EAHVGVVGAEHARGLGCAHGGHVRRAARLGDERDGAVVEHPG 536
EAHVGVVGAE A LG HGG V AA LGDERDGAVVE G
Sbjct: 619 EAHVGVVGAEDAGRLGGTHGGDVGGAAWLGDERDGAVVEDAG 494
Score = 58.3 bits (121), Expect(4) = 7e-021
Identities = 26/43 (60%), Positives = 31/43 (72%)
Frame = +1 / +1
Query: 358 HPEAEQRELGGVPVRQARADGAGLRDAQARRGARVHVLQEPER 486
HPEAE+RE G+P+R ARA AGLR Q +R A VHVL +P R
Sbjct: 316 HPEAERRERRGLPLRPARAHRAGLRHTQDQRRA*VHVLPQPVR 444
Score = 37.7 bits (76), Expect(4) = 7e-021
Identities = 16/25 (64%), Positives = 18/25 (72%)
Frame = +1 / +1
Query: 544 VPLRLHLAHLRAVPLGAHGRHARSQ 618
+PLRLHLAH RA+PL RHA Q
Sbjct: 502 LPLRLHLAHHRAMPLRPRRRHACRQ 576
Score = 33.1 bits (66), Expect(4) = 7e-021
Identities = 13/19 (68%), Positives = 13/19 (68%)
Frame = +3 / +3
Query: 606 CAQPRPRACSAPTTPTCAS 662
C P A SAPTTPTCAS
Sbjct: 564 CVPPSLPASSAPTTPTCAS 620
Score = 32.7 bits (65), Expect(4) = 7e-021
Identities = 17/35 (48%), Positives = 18/35 (51%)
Frame = +3 / +3
Query: 108 KWRL*ETAELLPRRRPTTWWCRSARC*STSSPTWP 212
+WRL* L RR C S RC*ST TWP
Sbjct: 66 QWRL*VMLFLPLPRRHPASSCPSVRC*STLCRTWP 170
>gb|BI776320.2|BI776320 EBem04_SQ001_J09_R embryo, 12 DPA, no treatment, cv Optic, EBem04
Hordeum vulgare subsp. vulgare cDNA clone
EBem04_SQ001_J09 5', mRNA sequence
Length = 625
Score = 351 bits (761), Expect = 6e-096
Identities = 146/188 (77%), Positives = 159/188 (84%)
Frame = +2 / +2
Query: 95 SKRDQMAPLGDGGXXXXXXSNNLVVSFGEMLIDFVPDVAGLSLAESGGFVKAPGGAPANV 274
S+ MAPLGD + LVVSFGEMLIDFVPDVAG+SLAESGGFVKAPGGAPANV
Sbjct: 62 SQEPPMAPLGDAVAPAAAAAPGLVVSFGEMLIDFVPDVAGVSLAESGGFVKAPGGAPANV 241
Query: 275 ACAIAKLGGSSAFVGKFGDDEFGHMLVNILKQNNVNSEGCLFDKHARTALAFVTLKHDGE 454
ACA++KLGGSSAFVGKFGDDEFGHMLV ILKQN VN+EGCLFD+HARTALAFVTLK +GE
Sbjct: 242 ACAVSKLGGSSAFVGKFGDDEFGHMLVEILKQNGVNAEGCLFDQHARTALAFVTLKANGE 421
Query: 455 REFMFYRNPSADMLLTEAELDLGLVRRARVFHYGSISLISEPCRSXXXXXXXXXXXXGVL 634
REFMFYRNPSADMLLTEAEL+L L+RRAR+FHYGSISLI+EPCRS G+L
Sbjct: 422 REFMFYRNPSADMLLTEAELNLDLIRRARIFHYGSISLITEPCRSAHVAAMRAAKSAGIL 601
Query: 635 CSYDPNVR 658
CSYDPNVR
Sbjct: 602 CSYDPNVR 625
Score = 217 bits (468), Expect = 1e-055
Identities = 108/183 (59%), Positives = 112/183 (61%)
Frame = -2 / -2
Query: 657 RTLGS*EQSTPXXXXXXXXXXXAERHGSEMSEMEP*WNTLXXXXXXXXXXXXXXXXXALG 478
RTLGS EQ P AER GS MSEMEP*W A G
Sbjct: 624 RTLGSYEQRMPADLAARMAATCAERQGSVMSEMEP*WKMRARRMRSRLSSASVSSMSADG 445
Query: 477 FL*NMNSRSPSCLSVTKASAVRACLSNRHPSEFTLFCFRMFTNMCPNSSSPNLPTKAEDP 298
*NMNSRSP LSVTKA AVRAC SNR PS T FCFR+ T+M PNSSSPNLPTKAE+P
Sbjct: 444 LR*NMNSRSPLALSVTKARAVRACWSNRQPSALTPFCFRISTSMWPNSSSPNLPTKAEEP 265
Query: 297 PSLAMAQATLAGAPPGALTKXXXXXXXXXATSGTKSISISPNDTTRLLDXXXXXAPPSPR 118
PSL AQATLAGAPPGALTK ATSGTKSISISP +TTR A SPR
Sbjct: 264 PSLETAQATLAGAPPGALTKPPDSASETPATSGTKSISISPKETTRPGAAAAAGATASPR 85
Query: 117 GAI 109
GAI
Sbjct: 84 GAI 76
Score = 72.1 bits (151), Expect(3) = 4e-030
Identities = 33/42 (78%), Positives = 33/42 (78%)
Frame = -1 / -1
Query: 658 AHVGVVGAEHARGLGCAHGGHVRRAARLGDERDGAVVEHPGA 533
AHVGVV AE A LG AHGG VRRAA LGDERDGAVVE GA
Sbjct: 625 AHVGVVRAEDAGRLGSAHGGDVRRAAGLGDERDGAVVEDAGA 500
Score = 61.6 bits (128), Expect(4) = 6e-023
Identities = 26/40 (65%), Positives = 31/40 (77%)
Frame = +1 / +1
Query: 361 PEAEQRELGGVPVRQARADGAGLRDAQARRGARVHVLQEP 480
PEAE+R+ G+PVR ARA G GLR AQ +R ARVHVL +P
Sbjct: 328 PEAERRQRRGLPVRPARAHGPGLRHAQGQRRARVHVLPQP 447
Score = 50.6 bits (104), Expect(3) = 4e-030
Identities = 29/50 (58%), Positives = 29/50 (58%)
Frame = -1 / -1
Query: 478 VPVEHELALPVVLERHEGQRRPRVLVEQAPLRXXXXXXXXXXXXVPELVV 329
V VEHELAL V LER EGQ R RVLVEQA L V ELVV
Sbjct: 445 VAVEHELALAVGLERDEGQGRARVLVEQAALGVDAVLLQDLHQHVAELVV 296
Score = 48.3 bits (99), Expect(4) = 6e-023
Identities = 20/28 (71%), Positives = 22/28 (78%)
Frame = +1 / +1
Query: 535 RQGVPLRLHLAHLRAVPLGAHGRHARSQ 618
R +PLRLHLAH RA+PLGA RHAR Q
Sbjct: 502 RPHLPLRLHLAHHRALPLGARRRHARCQ 585
Score = 47.8 bits (98), Expect(3) = 4e-030
Identities = 19/23 (82%), Positives = 20/23 (86%)
Frame = -1 / -1
Query: 241 EAARLGQRQPGHVGDEVDQHLAE 173
EAA LG+R GHVGDEVDQHLAE
Sbjct: 208 EAAGLGERDAGHVGDEVDQHLAE 140
Score = 36.8 bits (74), Expect(4) = 6e-023
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = +3 / +3
Query: 174 SARC*STSSPTWPGCR 221
SARC*STSSPTWP R
Sbjct: 141 SARC*STSSPTWPASR 188
Score = 22.6 bits (43), Expect(4) = 6e-023
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +1 / +1
Query: 1030 RRHLHHQEGRHP 1065
RRH Q GRHP
Sbjct: 565 RRHARCQVGRHP 600
>gb|BU981623.1|BU981623 HA24C13r HA Hordeum vulgare subsp. vulgare cDNA clone HA24C13
5-PRIME, mRNA sequence
Length = 522
Score = 350 bits (758), Expect = 1e-095
Identities = 141/171 (82%), Positives = 153/171 (89%)
Frame = +2 / +1
Query: 233 GGFVKAPGGAPANVACAIAKLGGSSAFVGKFGDDEFGHMLVNILKQNNVNSEGCLFDKHA 412
GGFVKAPGGAPANVACA++KLGGSSAFVGKFGDDEFGHMLV ILKQN VN+EGCLFD+HA
Sbjct: 10 GGFVKAPGGAPANVACAVSKLGGSSAFVGKFGDDEFGHMLVEILKQNGVNAEGCLFDQHA 189
Query: 413 RTALAFVTLKHDGEREFMFYRNPSADMLLTEAELDLGLVRRARVFHYGSISLISEPCRSX 592
RTALAFVTLK +GEREFMFYRNPSADMLLTEAEL+L L+RRAR+FHYGSISLI+EPCRS
Sbjct: 190 RTALAFVTLKANGEREFMFYRNPSADMLLTEAELNLDLIRRARIFHYGSISLITEPCRSA 369
Query: 593 XXXXXXXXXXXGVLCSYDPNVRLPLWPSPDAAREGILSIWKEADFIKVSDD 745
G+LCSYDPNVRLPLWPS AAR+GI+SIWKEADFIKVSDD
Sbjct: 370 HVAAMRAAKSAGILCSYDPNVRLPLWPSAQAARDGIMSIWKEADFIKVSDD 522
Score = 234 bits (505), Expect = 1e-060
Identities = 111/169 (65%), Positives = 115/169 (68%)
Frame = -2 / -2
Query: 744 SSLTLMKSASFQMLRMPSRAASGDGQSGRRTLGS*EQSTPXXXXXXXXXXXAERHGSEMS 565
SSLTLMKSASFQML MPSRAA +GQSGRRTLGS EQ P AER GS MS
Sbjct: 521 SSLTLMKSASFQMLMMPSRAAWAEGQSGRRTLGSYEQRMPADLAARMAATCAERQGSVMS 342
Query: 564 EMEP*WNTLXXXXXXXXXXXXXXXXXALGFL*NMNSRSPSCLSVTKASAVRACLSNRHPS 385
EMEP*W A G *NMNSRSP LSVTKA AVRAC SNR PS
Sbjct: 341 EMEP*WKMRARRMRSRLSSASVSSMSADGLR*NMNSRSPLALSVTKARAVRACWSNRQPS 162
Query: 384 EFTLFCFRMFTNMCPNSSSPNLPTKAEDPPSLAMAQATLAGAPPGALTK 238
T FCFR+ T+M PNSSSPNLPTKAE+PPSL AQATLAGAPPGALTK
Sbjct: 161 ALTPFCFRISTSMWPNSSSPNLPTKAEEPPSLETAQATLAGAPPGALTK 15
Score = 122 bits (261), Expect(2) = 3e-036
Identities = 55/71 (77%), Positives = 58/71 (81%)
Frame = -1 / -1
Query: 745 VVADLDEVGLLPDAEDALACGVGRRPEREAHVGVVGAEHARGLGCAHGGHVRRAARLGDE 566
+VA LDEVGLLPDA DA+A G+GR PEREAHVGVV AE A LG AHGG VRRAA LGDE
Sbjct: 522 IVAHLDEVGLLPDAHDAVAGGLGRGPEREAHVGVVRAEDAGRLGSAHGGDVRRAAGLGDE 343
Query: 565 RDGAVVEHPGA 533
RDGAVVE GA
Sbjct: 342 RDGAVVEDAGA 310
Score = 61.6 bits (128), Expect(3) = 1e-025
Identities = 26/40 (65%), Positives = 31/40 (77%)
Frame = +1 / +3
Query: 361 PEAEQRELGGVPVRQARADGAGLRDAQARRGARVHVLQEP 480
PEAE+R+ G+PVR ARA G GLR AQ +R ARVHVL +P
Sbjct: 138 PEAERRQRRGLPVRPARAHGPGLRHAQGQRRARVHVLPQP 257
Score = 50.6 bits (104), Expect(2) = 3e-036
Identities = 29/50 (58%), Positives = 29/50 (58%)
Frame = -1 / -1
Query: 478 VPVEHELALPVVLERHEGQRRPRVLVEQAPLRXXXXXXXXXXXXVPELVV 329
V VEHELAL V LER EGQ R RVLVEQA L V ELVV
Sbjct: 255 VAVEHELALAVGLERDEGQGRARVLVEQAALGVDAVLLQDLHQHVAELVV 106
Score = 48.3 bits (99), Expect(3) = 1e-025
Identities = 20/28 (71%), Positives = 22/28 (78%)
Frame = +1 / +3
Query: 535 RQGVPLRLHLAHLRAVPLGAHGRHARSQ 618
R +PLRLHLAH RA+PLGA RHAR Q
Sbjct: 312 RPHLPLRLHLAHHRALPLGARRRHARCQ 395
Score = 45.1 bits (92), Expect(3) = 1e-025
Identities = 19/27 (70%), Positives = 19/27 (70%)
Frame = +3 / +2
Query: 606 CAQPRPRACSAPTTPTCASRSGRRPTP 686
CA P A SA TTPTCASRSG RP P
Sbjct: 383 CALPSRPASSARTTPTCASRSGPRPRP 463
>gb|BI959274.1|BI959274 HVSMEn0019A10f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0019A10f, mRNA sequence
Length = 666
Score = 233 bits (503), Expect(2) = 3e-094
Identities = 94/127 (74%), Positives = 104/127 (81%)
Frame = +2 / +1
Query: 341 GHMLVNILKQNNVNSEGCLFDKHARTALAFVTLKHDGEREFMFYRNPSADMLLTEAELDL 520
GHMLV ILKQN VN+EGCLFD+HARTALAFVTLK +GEREFMFYRNPSADMLLTEA L
Sbjct: 232 GHMLVEILKQNGVNAEGCLFDQHARTALAFVTLKANGEREFMFYRNPSADMLLTEAXAHL 411
Query: 521 GLVRRARVFHYGSISLISEPCRSXXXXXXXXXXXXGVLCSYDPNVRLPLWPSPDAAREGI 700
L+RRAR+FHYGSISLI+EPCRS G+LCSYDP+VRLP+WP A REGI
Sbjct: 412 DLIRRARIFHYGSISLITEPCRSAHVAGMRAAKSAGILCSYDPHVRLPVWPLAQAGREGI 591
Query: 701 LSIWKEA 721
+SIWKEA
Sbjct: 592 MSIWKEA 612
Score = 133 bits (285), Expect(2) = 3e-094
Identities = 57/76 (75%), Positives = 62/76 (81%)
Frame = +2 / +2
Query: 113 APLGDGGXXXXXXSNNLVVSFGEMLIDFVPDVAGLSLAESGGFVKAPGGAPANVACAIAK 292
APLGD G + LVVSFGEMLIDFVPDVAG+SLAESGGFVKAPGGAPANVACA+++
Sbjct: 2 APLGDAGGPAAAAAPGLVVSFGEMLIDFVPDVAGVSLAESGGFVKAPGGAPANVACAVSE 181
Query: 293 LGGSSAFVGKFGDDEF 340
LGGSSAFVG G F
Sbjct: 182 LGGSSAFVGMGGRRRF 229
Score = 97.7 bits (207), Expect(3) = 9e-059
Identities = 46/76 (60%), Positives = 49/76 (64%)
Frame = -2 / -1
Query: 339 NSSSPNLPTKAEDPPSLAMAQATLAGAPPGALTKXXXXXXXXXATSGTKSISISPNDTTR 160
N P +PTKAE+PPS AQATLAGAPPGALTK ATSGTKSISISP +TTR
Sbjct: 228 NRRRPPIPTKAEEPPSSETAQATLAGAPPGALTKPPDSASETPATSGTKSISISPKETTR 49
Query: 159 LLDXXXXXAPPSPRGA 112
P SPRGA
Sbjct: 48 PGAAAAAGPPASPRGA 1
Score = 94.5 bits (200), Expect(3) = 9e-059
Identities = 41/63 (65%), Positives = 47/63 (74%)
Frame = -1 / -1
Query: 721 GLLPDAEDALACGVGRRPEREAHVGVVGAEHARGLGCAHGGHVRRAARLGDERDGAVVEH 542
G LPDA +A G+G+ P+REAHVGVV A+ A LG AH G VRRAA LGDERDGAVVE
Sbjct: 612 GFLPDAHNAFPAGLGQGPDREAHVGVVRAKDAGRLGSAHAGDVRRAAGLGDERDGAVVED 433
Query: 541 PGA 533
G+
Sbjct: 432 AGS 424
Score = 74.8 bits (157), Expect(3) = 9e-059
Identities = 33/47 (70%), Positives = 35/47 (74%)
Frame = -2 / -2
Query: 480 GFL*NMNSRSPSCLSVTKASAVRACLSNRHPSEFTLFCFRMFTNMCP 340
G *NMNSRSP LSVTKA AVRAC SNR PS T FCFR+ T+M P
Sbjct: 371 GLR*NMNSRSPLALSVTKARAVRACWSNRQPSALTPFCFRISTSMWP 231
Score = 73.9 bits (155), Expect(3) = 7e-029
Identities = 36/62 (58%), Positives = 39/62 (62%)
Frame = -2 / -2
Query: 732 LMKSASFQMLRMPSRAASGDGQSGRRTLGS*EQSTPXXXXXXXXXXXAERHGSEMSEMEP 553
L ++ASFQML MPSR A GQ+GRRT GS EQ P AER GS MSEMEP
Sbjct: 623 LREAASFQMLIMPSRPAWAKGQTGRRTWGSYEQRMPADLAARMPATCAERQGSVMSEMEP 444
Query: 552 *W 547
*W
Sbjct: 443 *W 438
Score = 61.6 bits (128), Expect(4) = 3e-027
Identities = 26/40 (65%), Positives = 31/40 (77%)
Frame = +1 / +3
Query: 361 PEAEQRELGGVPVRQARADGAGLRDAQARRGARVHVLQEP 480
PEAE+R+ G+PVR ARA G GLR AQ +R ARVHVL +P
Sbjct: 252 PEAERRQRRGLPVRPARAHGPGLRHAQGQRRARVHVLPQP 371
Score = 49.6 bits (102), Expect(3) = 7e-029
Identities = 24/31 (77%), Positives = 24/31 (77%)
Frame = -1 / -1
Query: 478 VPVEHELALPVVLERHEGQRRPRVLVEQAPL 386
V VEHELAL V LER EGQ R RVLVEQA L
Sbjct: 369 VAVEHELALAVGLERDEGQGRARVLVEQAAL 277
Score = 47.8 bits (98), Expect(3) = 7e-029
Identities = 19/23 (82%), Positives = 20/23 (86%)
Frame = -1 / -3
Query: 241 EAARLGQRQPGHVGDEVDQHLAE 173
EAA LG+R GHVGDEVDQHLAE
Sbjct: 130 EAAGLGERDAGHVGDEVDQHLAE 62
Score = 47.3 bits (97), Expect(4) = 3e-027
Identities = 19/25 (76%), Positives = 21/25 (84%)
Frame = +1 / +3
Query: 544 VPLRLHLAHLRAVPLGAHGRHARSQ 618
+PLRLHLAH RA+PLGA RHAR Q
Sbjct: 435 LPLRLHLAHHRALPLGARRRHARCQ 509
Score = 38.6 bits (78), Expect(4) = 3e-027
Identities = 17/27 (62%), Positives = 17/27 (62%)
Frame = +3 / +2
Query: 606 CAQPRPRACSAPTTPTCASRSGRRPTP 686
CA P A A TTPTCASRSG P P
Sbjct: 497 CALPSRPASFARTTPTCASRSGPWPRP 577
Score = 36.8 bits (74), Expect(4) = 3e-027
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = +3 / +3
Query: 174 SARC*STSSPTWPGCR 221
SARC*STSSPTWP R
Sbjct: 63 SARC*STSSPTWPASR 110
>gb|BG415409.1|BG415409 HVSMEk0006G08f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0006G08f, mRNA sequence
Length = 649
Score = 342 bits (741), Expect = 3e-093
Identities = 137/169 (81%), Positives = 152/169 (89%)
Frame = +2 / +2
Query: 485 ADMLLTEAELDLGLVRRARVFHYGSISLISEPCRSXXXXXXXXXXXXGVLCSYDPNVRLP 664
ADMLLTEAEL+L L+RRAR+FHYGSISLI+EPCRS G+LCSYDPNVRLP
Sbjct: 2 ADMLLTEAELNLDLIRRARIFHYGSISLITEPCRSAHVAAMRAAKSAGILCSYDPNVRLP 181
Query: 665 LWPSPDAAREGILSIWKEADFIKVSDDEVAFLTRGDANDEKNVLSLWFDGLKLLVVTDGD 844
LWPS AAR+GI+SIWKEADFIKVSDDEVAFLT+GDANDEKNVLSLWF+GLKLL+VTDG+
Sbjct: 182 LWPSAQAARDGIMSIWKEADFIKVSDDEVAFLTQGDANDEKNVLSLWFEGLKLLIVTDGE 361
Query: 845 KGCRYFTKDFKGSVPGFKVDTVDTTGAGDAFVGSLLVNVAKDDSIFHNE 991
KGCRYFTKDFKGSVPG+ V+TVDTTGAGDAFVGS LVNV+KDDSIF+NE
Sbjct: 362 KGCRYFTKDFKGSVPGYSVNTVDTTGAGDAFVGSFLVNVSKDDSIFYNE 508
Score = 216 bits (466), Expect = 3e-055
Identities = 107/160 (66%), Positives = 111/160 (69%)
Frame = -2 / -2
Query: 1026 ALENLRASRSFSSLWKMESSLATLTRREPTKASPAPVVSTVSTLKPGTLPLKSLVKYLHX 847
AL + SL KMESSL TLTR+EPTKASPAPVVSTV T PGT PLKSLVKYLH
Sbjct: 543 ALRTAAPPSGWPSL*KMESSLETLTRKEPTKASPAPVVSTVLTE*PGTEPLKSLVKYLHP 364
Query: 846 XXXXXXXXXXXXSNHRDSTFFSSLASPRVRKATSSSLTLMKSASFQMLRMPSRAASGDGQ 667
SN R+STFFSSLASP VRKATSSSLTLMKSASFQML MPSRAA +GQ
Sbjct: 363 FSPSVTMSSLRPSNQRESTFFSSLASPWVRKATSSSLTLMKSASFQMLMMPSRAAWAEGQ 184
Query: 666 SGRRTLGS*EQSTPXXXXXXXXXXXAERHGSEMSEMEP*W 547
SGRRTLGS EQ P AER GS MSEMEP*W
Sbjct: 183 SGRRTLGSYEQRMPADLAARMAATCAERQGSVMSEMEP*W 64
Score = 205 bits (442), Expect = 6e-052
Identities = 90/118 (76%), Positives = 99/118 (83%)
Frame = -1 / -1
Query: 886 HAALEVLGEVPASLVPVGDDEQLEPVKPQGQHVLLVVGVPAREEGHLVVADLDEVGLLPD 707
H ALEVLGEVPASL+ VGDDEQLE ++P+G+HVLLVVGV EEGHL+VA LDEVGLLPD
Sbjct: 403 HGALEVLGEVPASLLAVGDDEQLEALEPEGEHVLLVVGVALGEEGHLIVAHLDEVGLLPD 224
Query: 706 AEDALACGVGRRPEREAHVGVVGAEHARGLGCAHGGHVRRAARLGDERDGAVVEHPGA 533
A DA+A G+GR PEREAHVGVV AE A LG AHGG VRRAA LGDERDGAVVE G+
Sbjct: 223 AHDAVAGGLGRGPEREAHVGVVRAEDAGRLGSAHGGDVRRAAGLGDERDGAVVEDAGS 50
>gb|BU996404.1|BU996404 HM13H22r HM Hordeum vulgare subsp. vulgare cDNA clone HM13H22
5-PRIME, mRNA sequence
Length = 625
Score = 341 bits (740), Expect = 4e-093
Identities = 141/169 (83%), Positives = 154/169 (91%)
Frame = +2 / +2
Query: 161 LVVSFGEMLIDFVPDVAGLSLAESGGFVKAPGGAPANVACAIAKLGGSSAFVGKFGDDEF 340
LVVSFGEMLIDFVP+VAG+SLAESGGFVKAPGGAPANVACAI+KLGGSSAFVGKFGDDEF
Sbjct: 119 LVVSFGEMLIDFVPNVAGVSLAESGGFVKAPGGAPANVACAISKLGGSSAFVGKFGDDEF 298
Query: 341 GHMLVNILKQNNVNSEGCLFDKHARTALAFVTLKHDGEREFMFYRNPSADMLLTEAELDL 520
GHMLV+ILKQ+ VN+EGCLFD+HARTALAFVTLK +GEREFMFYRNPSADMLLTEAEL+L
Sbjct: 299 GHMLVDILKQSGVNAEGCLFDQHARTALAFVTLKSNGEREFMFYRNPSADMLLTEAELNL 478
Query: 521 GLVRRARVFHYGSISLISEPCRSXXXXXXXXXXXXGVLCSYDPNVRLPL 667
L+RRAR+FHYGSISLI+EPCRS G+LCSYDPNVRLPL
Sbjct: 479 DLIRRARIFHYGSISLITEPCRSAHVAAMRAAKSAGILCSYDPNVRLPL 625
Score = 166 bits (358), Expect(2) = 6e-058
Identities = 76/107 (71%), Positives = 81/107 (75%)
Frame = -2 / -2
Query: 480 GFL*NMNSRSPSCLSVTKASAVRACLSNRHPSEFTLFCFRMFTNMCPNSSSPNLPTKAED 301
G *NMNSRSP L VTKA AVRAC S R PS FT CFRM T+M PNSSSPNLPTKAE+
Sbjct: 438 GLR*NMNSRSPLDLRVTKARAVRACWSKRQPSAFTPLCFRMSTSMWPNSSSPNLPTKAEE 259
Query: 300 PPSLAMAQATLAGAPPGALTKXXXXXXXXXATSGTKSISISPNDTTR 160
PPSL +AQATLAGAPPGALTK AT GTKSI+ISP +TTR
Sbjct: 258 PPSLEIAQATLAGAPPGALTKPPDSASETPATFGTKSINISPKETTR 118
Score = 79.0 bits (166), Expect(2) = 6e-058
Identities = 36/45 (80%), Positives = 36/45 (80%)
Frame = -1 / -1
Query: 667 EREAHVGVVGAEHARGLGCAHGGHVRRAARLGDERDGAVVEHPGA 533
EREAHVGVVGAE A GLG AHGG V AA LGDERDGAVVE GA
Sbjct: 625 EREAHVGVVGAEDAGGLGGAHGGDVGGAAGLGDERDGAVVEDAGA 491
Score = 64.3 bits (134), Expect(4) = 3e-025
Identities = 27/43 (62%), Positives = 32/43 (74%)
Frame = +1 / +1
Query: 358 HPEAEQRELGGVPVRQARADGAGLRDAQARRGARVHVLQEPER 486
HPEAE+RE GG+P+R ARA GLR Q +R ARVHVL +P R
Sbjct: 316 HPEAERRERGGLPLRPARAHRPGLRHPQVQRRARVHVLPQPVR 444
Score = 53.3 bits (110), Expect(3) = 1e-021
Identities = 25/40 (62%), Positives = 25/40 (62%)
Frame = -2 / -2
Query: 666 SGRRTLGS*EQSTPXXXXXXXXXXXAERHGSEMSEMEP*W 547
SGRRTLGS*EQ P AER GS MSEMEP*W
Sbjct: 624 SGRRTLGS*EQRMPADLAARMAATWAERQGSVMSEMEP*W 505
Score = 46.4 bits (95), Expect(3) = 1e-021
Identities = 27/50 (54%), Positives = 28/50 (56%)
Frame = -1 / -1
Query: 478 VPVEHELALPVVLERHEGQRRPRVLVEQAPLRXXXXXXXXXXXXVPELVV 329
V VEHELAL V LE EGQ RVLVE+A LR V ELVV
Sbjct: 436 VAVEHELALAVGLEGDEGQGGARVLVEEAALRVHAALLQDVHQHVAELVV 287
Score = 42.3 bits (86), Expect(4) = 3e-025
Identities = 18/28 (64%), Positives = 20/28 (71%)
Frame = +1 / +1
Query: 535 RQGVPLRLHLAHLRAVPLGAHGRHARSQ 618
R +PLRLHLAH RA+PL RHAR Q
Sbjct: 493 RPHLPLRLHLAHHRALPLRPRRRHARRQ 576
Score = 41.8 bits (85), Expect(4) = 3e-025
Identities = 16/20 (80%), Positives = 16/20 (80%)
Frame = +3 / +3
Query: 606 CAQPRPRACSAPTTPTCASR 665
CA P P A SAPTTPTCASR
Sbjct: 564 CAPPSPPASSAPTTPTCASR 623
Score = 41.8 bits (85), Expect(3) = 1e-021
Identities = 16/23 (69%), Positives = 19/23 (82%)
Frame = -1 / -1
Query: 241 EAARLGQRQPGHVGDEVDQHLAE 173
EA+RLG+R GHV +EVDQHL E
Sbjct: 199 EASRLGERDAGHVWNEVDQHLTE 131
Score = 28.6 bits (56), Expect(4) = 3e-025
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +3 / +3
Query: 174 SARC*STSSPTWPGCR 221
S RC*STS TWP R
Sbjct: 132 SVRC*STSFQTWPASR 179
>gb|BF254147.3|BF254147 HVSMEf0003C12f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEf0003C12f, mRNA sequence
Length = 812
Score = 339 bits (734), Expect = 3e-092
Identities = 136/160 (85%), Positives = 149/160 (93%)
Frame = +2 / +1
Query: 626 GVLCSYDPNVRLPLWPSPDAAREGILSIWKEADFIKVSDDEVAFLTRGDANDEKNVLSLW 805
G+LCSYDPNVRLPLWPS AAR+GI+SIWKEADFIKVSDDEVAFLT+GDANDEKNVLSLW
Sbjct: 16 GILCSYDPNVRLPLWPSAQAARDGIMSIWKEADFIKVSDDEVAFLTQGDANDEKNVLSLW 195
Query: 806 FDGLKLLVVTDGDKGCRYFTKDFKGSVPGFKVDTVDTTGAGDAFVGSLLVNVAKDDSIFH 985
F+GLKLL+VTDG+KGCRYFTKDFKGSVPG+ V+TVDTTGAGDAFVGSLLVNV+KDDSIF+
Sbjct: 196 FEGLKLLIVTDGEKGCRYFTKDFKGSVPGYSVNTVDTTGAGDAFVGSLLVNVSKDDSIFY 375
Query: 986 NEEKLREALKFSNACGAICTTKKGAIPALPTVATAQDLIA 1105
NE KLRE L+ SNACGAICTTKKGAIPALPT T LI+
Sbjct: 376 NEAKLREVLQISNACGAICTTKKGAIPALPTTGTGLKLIS 495
Score = 237 bits (511), Expect = 2e-061
Identities = 117/163 (71%), Positives = 121/163 (74%)
Frame = -2 / -1
Query: 1113 LALAMRSWAVATVGSAGMAPFLVVQMAPQALENLRASRSFSSLWKMESSLATLTRREPTK 934
L + M V VGSAGMAPFLVVQMAPQA E S S +SL KMESSL TLTRREPTK
Sbjct: 503 LPMLMSFRPVPVVGSAGMAPFLVVQMAPQAFEICSTSLSLASL*KMESSLETLTRREPTK 324
Query: 933 ASPAPVVSTVSTLKPGTLPLKSLVKYLHXXXXXXXXXXXXXSNHRDSTFFSSLASPRVRK 754
ASPAPVVSTV T PGT PLKSLVKYLH SN R+STFFSSLASP VRK
Sbjct: 323 ASPAPVVSTVLTE*PGTEPLKSLVKYLHPFSPSVTMSSLRPSNQRESTFFSSLASPWVRK 144
Query: 753 ATSSSLTLMKSASFQMLRMPSRAASGDGQSGRRTLGS*EQSTP 625
ATSSSLTLMKSASFQML MPSRAA +GQSGRRTLGS EQ P
Sbjct: 143 ATSSSLTLMKSASFQMLMMPSRAAWAEGQSGRRTLGSYEQRMP 15
Score = 158 bits (340), Expect = 7e-038
Identities = 69/91 (75%), Positives = 77/91 (84%)
Frame = -1 / -3
Query: 886 HAALEVLGEVPASLVPVGDDEQLEPVKPQGQHVLLVVGVPAREEGHLVVADLDEVGLLPD 707
H ALEVLGEVPASL+ VGDDEQLE ++P+G+HVLLVVGV EEGHL+VA LDEVGLLPD
Sbjct: 276 HGALEVLGEVPASLLAVGDDEQLEALEPEGEHVLLVVGVALGEEGHLIVAHLDEVGLLPD 97
Query: 706 AEDALACGVGRRPEREAHVGVVGAEHARGLG 614
A DA+A G+GR PEREAHVGVV AE A LG
Sbjct: 96 AHDAVAGGLGRGPEREAHVGVVRAEDAGRLG 4
>gb|BI960452.1|BI960452 HVSMEn0024K09f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0024K09f, mRNA sequence
Length = 631
Score = 334 bits (724), Expect = 7e-091
Identities = 141/185 (76%), Positives = 154/185 (83%)
Frame = +2 / +3
Query: 95 SKRDQMAPLGDGGXXXXXXSNNLVVSFGEMLIDFVPDVAGLSLAESGGFVKAPGGAPANV 274
S+ MAPLGD + LVVSFGEMLIDFVPDVAG+SLAESGGFVKAPGGAPANV
Sbjct: 75 SQEPPMAPLGDAVAPAAAAAPGLVVSFGEMLIDFVPDVAGVSLAESGGFVKAPGGAPANV 254
Query: 275 ACAIAKLGGSSAFVGKFGDDEFGHMLVNILKQNNVNSEGCLFDKHARTALAFVTLKHDGE 454
ACA++KLGGSSAFVGKFGDDEFGHMLV ILKQN VN+EGCLFD+HARTALAFVTLK +GE
Sbjct: 255 ACAVSKLGGSSAFVGKFGDDEFGHMLVEILKQNGVNAEGCLFDQHARTALAFVTLKANGE 434
Query: 455 REFMFYRNPSADMLLTEAELDLGLVRRARVFHYGSISLISEPCRSXXXXXXXXXXXXGVL 634
REFMFYRNPSADMLLTEAEL+L L+RRAR+FHYGSISLI+E CRS G+L
Sbjct: 435 REFMFYRNPSADMLLTEAELNLDLIRRARIFHYGSISLITESCRSAHVGAMRAGKWGGIL 614
Query: 635 CSYDP 649
CS DP
Sbjct: 615 CSSDP 629
Score = 206 bits (445), Expect = 2e-052
Identities = 105/181 (58%), Positives = 109/181 (60%)
Frame = -2 / -1
Query: 651 LGS*EQSTPXXXXXXXXXXXAERHGSEMSEMEP*WNTLXXXXXXXXXXXXXXXXXALGFL 472
LGS EQ P AER S MSEMEP*W A G
Sbjct: 631 LGSDEQRIPPHLPARMAPTCAERQDSVMSEMEP*WKMRARRMRSRLSSASVSSMSADGLR 452
Query: 471 *NMNSRSPSCLSVTKASAVRACLSNRHPSEFTLFCFRMFTNMCPNSSSPNLPTKAEDPPS 292
*NMNSRSP LSVTKA AVRAC SNR PS T FCFR+ T+M PNSSSPNLPTKAE+PPS
Sbjct: 451 *NMNSRSPLALSVTKARAVRACWSNRQPSALTPFCFRISTSMWPNSSSPNLPTKAEEPPS 272
Query: 291 LAMAQATLAGAPPGALTKXXXXXXXXXATSGTKSISISPNDTTRLLDXXXXXAPPSPRGA 112
L AQATLAGAPPGALTK ATSGTKSISISP +TTR A SPRGA
Sbjct: 271 LETAQATLAGAPPGALTKPPDSASETPATSGTKSISISPKETTRPGAAAAAGATASPRGA 92
Query: 111 I 109
I
Sbjct: 91 I 89
Score = 52.8 bits (109), Expect(3) = 2e-024
Identities = 25/39 (64%), Positives = 26/39 (66%)
Frame = -1 / -3
Query: 649 GVVGAEHARGLGCAHGGHVRRAARLGDERDGAVVEHPGA 533
GV AE L AHG VRRAA LGDERDGAVVE G+
Sbjct: 629 GVGRAEDPAPLASAHGADVRRAAGLGDERDGAVVEDAGS 513
Score = 50.6 bits (104), Expect(3) = 2e-024
Identities = 29/50 (58%), Positives = 29/50 (58%)
Frame = -1 / -3
Query: 478 VPVEHELALPVVLERHEGQRRPRVLVEQAPLRXXXXXXXXXXXXVPELVV 329
V VEHELAL V LER EGQ R RVLVEQA L V ELVV
Sbjct: 458 VAVEHELALAVGLERDEGQGRARVLVEQAALGVDAVLLQDLHQHVAELVV 309
Score = 47.8 bits (98), Expect(3) = 2e-024
Identities = 19/23 (82%), Positives = 20/23 (86%)
Frame = -1 / -3
Query: 241 EAARLGQRQPGHVGDEVDQHLAE 173
EAA LG+R GHVGDEVDQHLAE
Sbjct: 221 EAAGLGERDAGHVGDEVDQHLAE 153
>gb|BF255121.2|BF255121 HVSMEf0006A05f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0006A05f, mRNA sequence
Length = 599
Score = 279 bits (604), Expect(3) = 5e-090
Identities = 117/133 (87%), Positives = 126/133 (94%)
Frame = +2 / +2
Query: 161 LVVSFGEMLIDFVPDVAGLSLAESGGFVKAPGGAPANVACAIAKLGGSSAFVGKFGDDEF 340
LVVS GEMLIDFVPDVAG+SLAESGGFVKAPGGAPANVACA++KLGGSSAFVGKFGDDEF
Sbjct: 32 LVVSLGEMLIDFVPDVAGVSLAESGGFVKAPGGAPANVACAVSKLGGSSAFVGKFGDDEF 211
Query: 341 GHMLVNILKQNNVNSEGCLFDKHARTALAFVTLKHDGEREFMFYRNPSADMLLTEAELDL 520
GHMLV ILKQN VN+EGCLFD+HARTALAFVTLK +GEREFMFYRNPSADMLLTEAEL+L
Sbjct: 212 GHMLVEILKQNGVNAEGCLFDQHARTALAFVTLKANGEREFMFYRNPSADMLLTEAELNL 391
Query: 521 GLVRRARVFHYGS 559
L+RRAR+F GS
Sbjct: 392 DLIRRARIFTTGS 430
Score = 174 bits (375), Expect(3) = 6e-061
Identities = 79/107 (73%), Positives = 83/107 (77%)
Frame = -2 / -3
Query: 480 GFL*NMNSRSPSCLSVTKASAVRACLSNRHPSEFTLFCFRMFTNMCPNSSSPNLPTKAED 301
G *NMNSRSP LSVTKA AVRAC SNR PS T FCFR+ T+M PNSSSPNLPTKAE+
Sbjct: 351 GLR*NMNSRSPLALSVTKARAVRACWSNRQPSALTPFCFRISTSMWPNSSSPNLPTKAEE 172
Query: 300 PPSLAMAQATLAGAPPGALTKXXXXXXXXXATSGTKSISISPNDTTR 160
PPSL AQATLAGAPPGALTK ATSGTKSISISP +TTR
Sbjct: 171 PPSLETAQATLAGAPPGALTKPPDSASETPATSGTKSISISPKETTR 31
Score = 61.6 bits (128), Expect(3) = 7e-023
Identities = 26/40 (65%), Positives = 31/40 (77%)
Frame = +1 / +1
Query: 361 PEAEQRELGGVPVRQARADGAGLRDAQARRGARVHVLQEP 480
PEAE+R+ G+PVR ARA G GLR AQ +R ARVHVL +P
Sbjct: 232 PEAERRQRRGLPVRPARAHGPGLRHAQGQRRARVHVLPQP 351
Score = 54.2 bits (112), Expect(3) = 7e-023
Identities = 24/60 (40%), Positives = 28/60 (46%)
Frame = +2 / +1
Query: 548 HYGSISLISEPCRSXXXXXXXXXXXXGVLCSYDPNVRLPLWPSPDAAREGILSIWKEADF 727
HYG ISLI+EPCRS G+LCSYDP P P A + + DF
Sbjct: 418 HYGLISLITEPCRSAHVAGMRAAKSAGILCSYDPTCASRSGPRPRPAATAS*ASGRRPDF 597
Score = 51.9 bits (107), Expect(3) = 6e-061
Identities = 20/28 (71%), Positives = 24/28 (85%)
Frame = -1 / -1
Query: 730 DEVGLLPDAEDALACGVGRRPEREAHVG 647
++ GLLPDA DA+A G+GR PEREAHVG
Sbjct: 599 EKSGLLPDAHDAVAAGLGRGPEREAHVG 516
Score = 51.0 bits (105), Expect(3) = 5e-090
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = +2 / +3
Query: 647 PNVRLPLWPSPDAAREGILSIWKEADFI 730
PNVRLPLWPS A R+G++SIW EA +
Sbjct: 516 PNVRLPLWPSAQAGRDGVMSIW*EAGLL 599
Score = 47.8 bits (98), Expect(3) = 6e-061
Identities = 23/34 (67%), Positives = 24/34 (70%)
Frame = -1 / -3
Query: 646 VVGAEHARGLGCAHGGHVRRAARLGDERDGAVVE 545
VV AE A LG AH G VRRAA LGDERD VV+
Sbjct: 516 VVRAEDAGRLGSAHAGDVRRAAGLGDERDEPVVK 415
Score = 41.4 bits (84), Expect(3) = 5e-090
Identities = 17/23 (73%), Positives = 18/23 (78%)
Frame = +1 / +3
Query: 550 LRLHLAHLRAVPLGAHGRHARSQ 618
LR HLAH RA+PLGA RHAR Q
Sbjct: 420 LRAHLAHHRALPLGARRRHARCQ 488
Score = 35.0 bits (70), Expect(3) = 7e-023
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = +3 / +3
Query: 177 ARC*STSSPTWPGCR 221
ARC*STSSPTWP R
Sbjct: 48 ARC*STSSPTWPASR 92
>gb|AL507171.1|AL507171 AL507171 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY05O10T 5',
mRNA sequence
Length = 545
Score = 325 bits (705), Expect = 3e-088
Identities = 136/165 (82%), Positives = 148/165 (89%)
Frame = +2 / +1
Query: 95 SKRDQMAPLGDGGXXXXXXSNNLVVSFGEMLIDFVPDVAGLSLAESGGFVKAPGGAPANV 274
S+ MAPLGD + LVVSFGEMLIDFVPDVAG+SLAESGGFVKAPGGAPANV
Sbjct: 22 SQEPPMAPLGDAVAPAAAAAPGLVVSFGEMLIDFVPDVAGVSLAESGGFVKAPGGAPANV 201
Query: 275 ACAIAKLGGSSAFVGKFGDDEFGHMLVNILKQNNVNSEGCLFDKHARTALAFVTLKHDGE 454
ACA++KLGGSSAFVGKFGDDEFGHMLV ILKQN VN+EGCLFD+HARTALAFVTLK +GE
Sbjct: 202 ACAVSKLGGSSAFVGKFGDDEFGHMLVEILKQNGVNAEGCLFDQHARTALAFVTLKANGE 381
Query: 455 REFMFYRNPSADMLLTEAELDLGLVRRARVFHYGSISLISEPCRS 589
REFMFYRNPSADMLLTEAEL+L L+RRAR+FHYGSISLI+EPCRS
Sbjct: 382 REFMFYRNPSADMLLTEAELNLDLIRRARIFHYGSISLITEPCRS 516
Score = 204 bits (439), Expect = 1e-051
Identities = 99/160 (61%), Positives = 103/160 (64%)
Frame = -2 / -1
Query: 588 ERHGSEMSEMEP*WNTLXXXXXXXXXXXXXXXXXALGFL*NMNSRSPSCLSVTKASAVRA 409
ER GS MSEMEP*W A G *NMNSRSP LSVTKA AVRA
Sbjct: 515 ERQGSVMSEMEP*WKMRARRMRSRLSSASVSSMSADGLR*NMNSRSPLALSVTKARAVRA 336
Query: 408 CLSNRHPSEFTLFCFRMFTNMCPNSSSPNLPTKAEDPPSLAMAQATLAGAPPGALTKXXX 229
C SNR PS T FCFR+ T+M PNSSSPNLPTKAE+PPSL AQATLAGAPPGALTK
Sbjct: 335 CWSNRQPSALTPFCFRISTSMWPNSSSPNLPTKAEEPPSLETAQATLAGAPPGALTKPPD 156
Query: 228 XXXXXXATSGTKSISISPNDTTRLLDXXXXXAPPSPRGAI 109
ATSGTKSISISP +TTR A SPRGAI
Sbjct: 155 SASETPATSGTKSISISPKETTRPGAAAAAGATASPRGAI 36
Score = 61.6 bits (128), Expect(3) = 9e-022
Identities = 26/40 (65%), Positives = 31/40 (77%)
Frame = +1 / +3
Query: 361 PEAEQRELGGVPVRQARADGAGLRDAQARRGARVHVLQEP 480
PEAE+R+ G+PVR ARA G GLR AQ +R ARVHVL +P
Sbjct: 288 PEAERRQRRGLPVRPARAHGPGLRHAQGQRRARVHVLPQP 407
Score = 53.8 bits (111), Expect(3) = 9e-025
Identities = 23/28 (82%), Positives = 23/28 (82%)
Frame = -1 / -3
Query: 616 GCAHGGHVRRAARLGDERDGAVVEHPGA 533
G AHGG VRRAA LGDERDGAVVE GA
Sbjct: 543 GSAHGGDVRRAAGLGDERDGAVVEDAGA 460
Score = 50.6 bits (104), Expect(3) = 9e-025
Identities = 29/50 (58%), Positives = 29/50 (58%)
Frame = -1 / -3
Query: 478 VPVEHELALPVVLERHEGQRRPRVLVEQAPLRXXXXXXXXXXXXVPELVV 329
V VEHELAL V LER EGQ R RVLVEQA L V ELVV
Sbjct: 405 VAVEHELALAVGLERDEGQGRARVLVEQAALGVDAVLLQDLHQHVAELVV 256
Score = 48.3 bits (99), Expect(3) = 9e-022
Identities = 20/28 (71%), Positives = 22/28 (78%)
Frame = +1 / +3
Query: 535 RQGVPLRLHLAHLRAVPLGAHGRHARSQ 618
R +PLRLHLAH RA+PLGA RHAR Q
Sbjct: 462 RPHLPLRLHLAHHRALPLGARRRHARCQ 545
Score = 47.8 bits (98), Expect(3) = 9e-025
Identities = 19/23 (82%), Positives = 20/23 (86%)
Frame = -1 / -3
Query: 241 EAARLGQRQPGHVGDEVDQHLAE 173
EAA LG+R GHVGDEVDQHLAE
Sbjct: 168 EAAGLGERDAGHVGDEVDQHLAE 100
Score = 36.8 bits (74), Expect(3) = 9e-022
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = +3 / +2
Query: 174 SARC*STSSPTWPGCR 221
SARC*STSSPTWP R
Sbjct: 101 SARC*STSSPTWPASR 148
>gb|BQ766977.1|BQ766977 EBro08_SQ007_K16_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ007_K16 5', mRNA sequence
Length = 587
Score = 325 bits (705), Expect = 3e-088
Identities = 136/165 (82%), Positives = 148/165 (89%)
Frame = +2 / +1
Query: 95 SKRDQMAPLGDGGXXXXXXSNNLVVSFGEMLIDFVPDVAGLSLAESGGFVKAPGGAPANV 274
S+ MAPLGD + LVVSFGEMLIDFVPDVAG+SLAESGGFVKAPGGAPANV
Sbjct: 70 SQEPPMAPLGDAVAPAAAAAPGLVVSFGEMLIDFVPDVAGVSLAESGGFVKAPGGAPANV 249
Query: 275 ACAIAKLGGSSAFVGKFGDDEFGHMLVNILKQNNVNSEGCLFDKHARTALAFVTLKHDGE 454
ACA++KLGGSSAFVGKFGDDEFGHMLV ILKQN VN+EGCLFD+HARTALAFVTLK +GE
Sbjct: 250 ACAVSKLGGSSAFVGKFGDDEFGHMLVEILKQNGVNAEGCLFDQHARTALAFVTLKANGE 429
Query: 455 REFMFYRNPSADMLLTEAELDLGLVRRARVFHYGSISLISEPCRS 589
REFMFYRNPSADMLLTEAEL+L L+RRAR+FHYGSISLI+EPCRS
Sbjct: 430 REFMFYRNPSADMLLTEAELNLDLIRRARIFHYGSISLITEPCRS 564
Score = 204 bits (439), Expect = 1e-051
Identities = 99/160 (61%), Positives = 103/160 (64%)
Frame = -2 / -1
Query: 588 ERHGSEMSEMEP*WNTLXXXXXXXXXXXXXXXXXALGFL*NMNSRSPSCLSVTKASAVRA 409
ER GS MSEMEP*W A G *NMNSRSP LSVTKA AVRA
Sbjct: 563 ERQGSVMSEMEP*WKMRARRMRSRLSSASVSSMSADGLR*NMNSRSPLALSVTKARAVRA 384
Query: 408 CLSNRHPSEFTLFCFRMFTNMCPNSSSPNLPTKAEDPPSLAMAQATLAGAPPGALTKXXX 229
C SNR PS T FCFR+ T+M PNSSSPNLPTKAE+PPSL AQATLAGAPPGALTK
Sbjct: 383 CWSNRQPSALTPFCFRISTSMWPNSSSPNLPTKAEEPPSLETAQATLAGAPPGALTKPPD 204
Query: 228 XXXXXXATSGTKSISISPNDTTRLLDXXXXXAPPSPRGAI 109
ATSGTKSISISP +TTR A SPRGAI
Sbjct: 203 SASETPATSGTKSISISPKETTRPGAAAAAGATASPRGAI 84
Score = 61.6 bits (128), Expect(3) = 4e-021
Identities = 26/40 (65%), Positives = 31/40 (77%)
Frame = +1 / +3
Query: 361 PEAEQRELGGVPVRQARADGAGLRDAQARRGARVHVLQEP 480
PEAE+R+ G+PVR ARA G GLR AQ +R ARVHVL +P
Sbjct: 336 PEAERRQRRGLPVRPARAHGPGLRHAQGQRRARVHVLPQP 455
Score = 51.5 bits (106), Expect(3) = 4e-024
Identities = 22/26 (84%), Positives = 22/26 (84%)
Frame = -1 / -3
Query: 610 AHGGHVRRAARLGDERDGAVVEHPGA 533
AHGG VRRAA LGDERDGAVVE GA
Sbjct: 585 AHGGDVRRAAGLGDERDGAVVEDAGA 508
Score = 50.6 bits (104), Expect(3) = 4e-024
Identities = 29/50 (58%), Positives = 29/50 (58%)
Frame = -1 / -3
Query: 478 VPVEHELALPVVLERHEGQRRPRVLVEQAPLRXXXXXXXXXXXXVPELVV 329
V VEHELAL V LER EGQ R RVLVEQA L V ELVV
Sbjct: 453 VAVEHELALAVGLERDEGQGRARVLVEQAALGVDAVLLQDLHQHVAELVV 304
Score = 47.8 bits (98), Expect(3) = 4e-024
Identities = 19/23 (82%), Positives = 20/23 (86%)
Frame = -1 / -3
Query: 241 EAARLGQRQPGHVGDEVDQHLAE 173
EAA LG+R GHVGDEVDQHLAE
Sbjct: 216 EAAGLGERDAGHVGDEVDQHLAE 148
Score = 46.4 bits (95), Expect(3) = 4e-021
Identities = 19/26 (73%), Positives = 21/26 (80%)
Frame = +1 / +3
Query: 535 RQGVPLRLHLAHLRAVPLGAHGRHAR 612
R +PLRLHLAH RA+PLGA RHAR
Sbjct: 510 RPHLPLRLHLAHHRALPLGARRRHAR 587
Score = 36.8 bits (74), Expect(3) = 4e-021
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = +3 / +2
Query: 174 SARC*STSSPTWPGCR 221
SARC*STSSPTWP R
Sbjct: 149 SARC*STSSPTWPASR 196
>gb|AW982436.3|AW982436 HVSMEg0003E07f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0003E07f, mRNA sequence
Length = 859
Score = 314 bits (680), Expect(3) = 3e-088
Identities = 132/165 (80%), Positives = 144/165 (87%)
Frame = +2 / +1
Query: 95 SKRDQMAPLGDGGXXXXXXSNNLVVSFGEMLIDFVPDVAGLSLAESGGFVKAPGGAPANV 274
S+ MAPLGD + LVVSFGEMLIDFVPDVAG+SLAESGGFVKAPGGAPANV
Sbjct: 73 SQEPPMAPLGDAVAPAAAAAPGLVVSFGEMLIDFVPDVAGVSLAESGGFVKAPGGAPANV 252
Query: 275 ACAIAKLGGSSAFVGKFGDDEFGHMLVNILKQNNVNSEGCLFDKHARTALAFVTLKHDGE 454
ACA++KLGGSSAFVGKFGDDEFGHMLV ILKQN VN+EGCLFD+HART LAFVTLK +GE
Sbjct: 253 ACAVSKLGGSSAFVGKFGDDEFGHMLVEILKQNGVNAEGCLFDQHARTGLAFVTLKANGE 432
Query: 455 REFMFYRNPSADMLLTEAELDLGLVRRARVFHYGSISLISEPCRS 589
REFMFYRNPSADMLLTEAEL+L L+RRAR+FHYGSI L +E CRS
Sbjct: 433 REFMFYRNPSADMLLTEAELNLDLIRRARIFHYGSILLNTEACRS 567
Score = 180 bits (388), Expect(2) = 2e-051
Identities = 85/124 (68%), Positives = 89/124 (71%)
Frame = -2 / -3
Query: 480 GFL*NMNSRSPSCLSVTKASAVRACLSNRHPSEFTLFCFRMFTNMCPNSSSPNLPTKAED 301
G *NMNSRSP LSVTKA VRAC SNR PS T FCFR+ T+M PNSSSPNLPTKAE+
Sbjct: 458 GLR*NMNSRSPLALSVTKARPVRACWSNRQPSALTPFCFRISTSMWPNSSSPNLPTKAEE 279
Query: 300 PPSLAMAQATLAGAPPGALTKXXXXXXXXXATSGTKSISISPNDTTRLLDXXXXXAPPSP 121
PPSL AQATLAGAPPGALTK ATSGTKSISISP +TTR A SP
Sbjct: 278 PPSLETAQATLAGAPPGALTKPPDSASETPATSGTKSISISPKETTRPGAAAAAGATASP 99
Query: 120 RGAI 109
RGAI
Sbjct: 98 RGAI 87
Score = 43.7 bits (89), Expect(2) = 2e-051
Identities = 21/52 (40%), Positives = 28/52 (53%)
Frame = -1 / -2
Query: 685 GVGRRPEREAHVGVVGAEHARGLGCAHGGHVRRAARLGDERDGAVVEHPGAP 530
G G R + E V R LG AH G++ R A G ++DG VV+ PG+P
Sbjct: 663 GPGPRAKSERRRWVRTTRGCRRLGSAHAGNLPRPAGFGIKQDGPVVKDPGSP 508
Score = 26.3 bits (51), Expect(3) = 3e-088
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = +2 / +3
Query: 626 GVLCSYDPNVRLPLWPSPDA 685
G+L Y+PNV WP A
Sbjct: 603 GILWLYEPNVAFRFWPLAQA 662
Score = 25.4 bits (49), Expect(3) = 3e-088
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +2 / +2
Query: 677 PDAAREGILSIWKEADFIK 733
P G++S WKE FIK
Sbjct: 656 PGPPGTGLMSFWKEGRFIK 712
>gb|BQ468435.1|BQ468435 HM01D23T HM Hordeum vulgare subsp. vulgare cDNA clone HM01D23
5-PRIME, mRNA sequence
Length = 598
Score = 324 bits (701), Expect = 1e-087
Identities = 135/165 (81%), Positives = 147/165 (89%)
Frame = +2 / +2
Query: 95 SKRDQMAPLGDGGXXXXXXSNNLVVSFGEMLIDFVPDVAGLSLAESGGFVKAPGGAPANV 274
S+ MAPLGD + LVVSFGEMLIDFVPDVAG+SLAESGGFVKAPGGAPANV
Sbjct: 80 SQEPPMAPLGDAVAPAAAAAPGLVVSFGEMLIDFVPDVAGVSLAESGGFVKAPGGAPANV 259
Query: 275 ACAIAKLGGSSAFVGKFGDDEFGHMLVNILKQNNVNSEGCLFDKHARTALAFVTLKHDGE 454
ACA++KLGGSSAFVGKFGDDEFGHMLV ILKQN VN+EGCLFD+HART LAFVTLK +GE
Sbjct: 260 ACAVSKLGGSSAFVGKFGDDEFGHMLVEILKQNGVNAEGCLFDQHARTVLAFVTLKANGE 439
Query: 455 REFMFYRNPSADMLLTEAELDLGLVRRARVFHYGSISLISEPCRS 589
REFMFYRNPSADMLLTEAEL+L L+RRAR+FHYGSISLI+EPCRS
Sbjct: 440 REFMFYRNPSADMLLTEAELNLDLIRRARIFHYGSISLITEPCRS 574
Score = 202 bits (435), Expect = 5e-051
Identities = 98/160 (61%), Positives = 102/160 (63%)
Frame = -2 / -2
Query: 588 ERHGSEMSEMEP*WNTLXXXXXXXXXXXXXXXXXALGFL*NMNSRSPSCLSVTKASAVRA 409
ER GS MSEMEP*W A G *NMNSRSP LSVTKA VRA
Sbjct: 573 ERQGSVMSEMEP*WKMRARRMRSRLSSASVSSMSADGLR*NMNSRSPLALSVTKARTVRA 394
Query: 408 CLSNRHPSEFTLFCFRMFTNMCPNSSSPNLPTKAEDPPSLAMAQATLAGAPPGALTKXXX 229
C SNR PS T FCFR+ T+M PNSSSPNLPTKAE+PPSL AQATLAGAPPGALTK
Sbjct: 393 CWSNRQPSALTPFCFRISTSMWPNSSSPNLPTKAEEPPSLETAQATLAGAPPGALTKPPD 214
Query: 228 XXXXXXATSGTKSISISPNDTTRLLDXXXXXAPPSPRGAI 109
ATSGTKSISISP +TTR A SPRGAI
Sbjct: 213 SASETPATSGTKSISISPKETTRPGAAAAAGATASPRGAI 94
Score = 61.6 bits (128), Expect(3) = 4e-021
Identities = 26/40 (65%), Positives = 31/40 (77%)
Frame = +1 / +1
Query: 361 PEAEQRELGGVPVRQARADGAGLRDAQARRGARVHVLQEP 480
PEAE+R+ G+PVR ARA G GLR AQ +R ARVHVL +P
Sbjct: 346 PEAERRQRRGLPVRPARAHGPGLRHAQGQRRARVHVLPQP 465
Score = 50.6 bits (104), Expect(3) = 3e-023
Identities = 29/50 (58%), Positives = 29/50 (58%)
Frame = -1 / -1
Query: 478 VPVEHELALPVVLERHEGQRRPRVLVEQAPLRXXXXXXXXXXXXVPELVV 329
V VEHELAL V LER EGQ R RVLVEQA L V ELVV
Sbjct: 463 VAVEHELALAVGLERDEGQDRARVLVEQAALGVDAVLLQDLHQHVAELVV 314
Score = 48.7 bits (100), Expect(3) = 3e-023
Identities = 21/26 (80%), Positives = 21/26 (80%)
Frame = -1 / -1
Query: 610 AHGGHVRRAARLGDERDGAVVEHPGA 533
AH G VRRAA LGDERDGAVVE GA
Sbjct: 595 AHAGDVRRAAGLGDERDGAVVEDAGA 518
Score = 47.8 bits (98), Expect(3) = 3e-023
Identities = 19/23 (82%), Positives = 20/23 (86%)
Frame = -1 / -1
Query: 241 EAARLGQRQPGHVGDEVDQHLAE 173
EAA LG+R GHVGDEVDQHLAE
Sbjct: 226 EAAGLGERDAGHVGDEVDQHLAE 158
Score = 46.4 bits (95), Expect(3) = 4e-021
Identities = 19/26 (73%), Positives = 21/26 (80%)
Frame = +1 / +1
Query: 535 RQGVPLRLHLAHLRAVPLGAHGRHAR 612
R +PLRLHLAH RA+PLGA RHAR
Sbjct: 520 RPHLPLRLHLAHHRALPLGARRRHAR 597
Score = 36.8 bits (74), Expect(3) = 4e-021
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = +3 / +3
Query: 174 SARC*STSSPTWPGCR 221
SARC*STSSPTWP R
Sbjct: 159 SARC*STSSPTWPASR 206
>gb|BU980246.1|BU980246 HA20B22r HA Hordeum vulgare subsp. vulgare cDNA clone HA20B22
5-PRIME, mRNA sequence
Length = 486
Score = 322 bits (698), Expect = 3e-087
Identities = 128/145 (88%), Positives = 140/145 (96%)
Frame = +2 / +1
Query: 626 GVLCSYDPNVRLPLWPSPDAAREGILSIWKEADFIKVSDDEVAFLTRGDANDEKNVLSLW 805
G+LCSYDPNVRLPLWPS AAR+GI+SIWKEADFIKVSDDEVAFLT+GDANDEKNVLSLW
Sbjct: 52 GILCSYDPNVRLPLWPSAQAARDGIMSIWKEADFIKVSDDEVAFLTQGDANDEKNVLSLW 231
Query: 806 FDGLKLLVVTDGDKGCRYFTKDFKGSVPGFKVDTVDTTGAGDAFVGSLLVNVAKDDSIFH 985
F+GLKLL+VTDG+KGCRYFTKDFKGSVPG+ V+TVDTTGAGDAFVGSLLVNV+KDDSIF+
Sbjct: 232 FEGLKLLIVTDGEKGCRYFTKDFKGSVPGYSVNTVDTTGAGDAFVGSLLVNVSKDDSIFY 411
Query: 986 NEEKLREALKFSNACGAICTTKKGA 1060
NE KLRE L+FSNACGAICTTKKGA
Sbjct: 412 NEAKLREVLQFSNACGAICTTKKGA 486
Score = 225 bits (486), Expect = 5e-058
Identities = 109/145 (75%), Positives = 112/145 (77%)
Frame = -2 / -2
Query: 1059 APFLVVQMAPQALENLRASRSFSSLWKMESSLATLTRREPTKASPAPVVSTVSTLKPGTL 880
APFLVVQMAPQA EN S S +SL KMESSL TLTRREPTKASPAPVVSTV T PGT
Sbjct: 485 APFLVVQMAPQAFENCSTSLSLASL*KMESSLETLTRREPTKASPAPVVSTVLTE*PGTE 306
Query: 879 PLKSLVKYLHXXXXXXXXXXXXXSNHRDSTFFSSLASPRVRKATSSSLTLMKSASFQMLR 700
PLKSLVKYLH SN R+STFFSSLASP VRKATSSSLTLMKSASFQML
Sbjct: 305 PLKSLVKYLHPFSPSVTMSSLRPSNQRESTFFSSLASPWVRKATSSSLTLMKSASFQMLM 126
Query: 699 MPSRAASGDGQSGRRTLGS*EQSTP 625
MPSRAA +GQSGRRTLGS EQ P
Sbjct: 125 MPSRAAWAEGQSGRRTLGSYEQRMP 51
Score = 177 bits (380), Expect = 2e-043
Identities = 77/101 (76%), Positives = 85/101 (84%)
Frame = -1 / -1
Query: 886 HAALEVLGEVPASLVPVGDDEQLEPVKPQGQHVLLVVGVPAREEGHLVVADLDEVGLLPD 707
H ALEVLGEVPASL+ VGDDEQLE ++P+G+HVLLVVGV EEGHL+VA LDEVGLLPD
Sbjct: 312 HGALEVLGEVPASLLAVGDDEQLEALEPEGEHVLLVVGVALGEEGHLIVAHLDEVGLLPD 133
Query: 706 AEDALACGVGRRPEREAHVGVVGAEHARGLGCAHGGHVRRA 584
A DA+A G+GR PEREAHVGVV AE A LG AHGG VRRA
Sbjct: 132 AHDAVAGGLGRGPEREAHVGVVRAEDAGRLGSAHGGDVRRA 10
>gb|BG309049.1|BG309049 HVSMEc0001M03f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0001M03f, mRNA sequence
Length = 866
Score = 318 bits (689), Expect = 5e-086
Identities = 139/201 (69%), Positives = 153/201 (76%)
Frame = +2 / +3
Query: 95 SKRDQMAPLGDGGXXXXXXSNNLVVSFGEMLIDFVPDVAGLSLAESGGFVKAPGGAPANV 274
S+ +APLGD LVV FGEMLIDFVPDVAG+SLAESGGFV+APGGAPANV
Sbjct: 72 SQEPPVAPLGDAVAPAAAAPPGLVVFFGEMLIDFVPDVAGVSLAESGGFVRAPGGAPANV 251
Query: 275 ACAIAKLGGSSAFVGKFGDDEFGHMLVNILKQNNVNSEGCLFDKHARTALAFVTLKHDGE 454
CA+ KLGGSS FVGKFGDDEFGHMLV ILKQN VN+ GCLFD+HARTALAFVTL+ +GE
Sbjct: 252 VCAVYKLGGSSVFVGKFGDDEFGHMLVEILKQNGVNAGGCLFDQHARTALAFVTLRANGE 431
Query: 455 REFMFYRNPSADMLLTEAELDLGLVRRARVFHYGSISLISEPCRSXXXXXXXXXXXXGVL 634
REFMFYRNP ADMLLTEAEL+L L+RRAR+FHYGSISLI+EP RS +L
Sbjct: 432 REFMFYRNPWADMLLTEAELNLDLIRRARMFHYGSISLITEPWRSGHVAXMRSDNLGRIL 611
Query: 635 CSYDPNVRLPLWPSPDAAREG 697
YD VR PLWP A G
Sbjct: 612 WLYDHKVRPPLWPLAPARPRG 674
Score = 208 bits (449), Expect = 6e-053
Identities = 107/200 (53%), Positives = 114/200 (57%)
Frame = -2 / -2
Query: 711 QMLRMPSRAASGDGQSGRRTLGS*EQSTPXXXXXXXXXXXAERHGSEMSEMEP*WNTLXX 532
Q+++ P A G +G RTL S Q ER GS MSEMEP*WN
Sbjct: 688 QVIKSPLGRAGAKGHNGGRTLWSYNQRIRPKLSERMXATCPERQGSVMSEMEP*WNMRAR 509
Query: 531 XXXXXXXXXXXXXXXALGFL*NMNSRSPSCLSVTKASAVRACLSNRHPSEFTLFCFRMFT 352
A G *NMNSRSP LSVTKA AVRAC SNR P T FCFR+ T
Sbjct: 508 RIRSRLSSASVSSMSAHGLR*NMNSRSPLALSVTKARAVRACWSNRQPPALTPFCFRIST 329
Query: 351 NMCPNSSSPNLPTKAEDPPSLAMAQATLAGAPPGALTKXXXXXXXXXATSGTKSISISPN 172
+M PNSSSPNLPTK E+PPSL AQ TLAGAPPGALTK ATSGTKSISISP
Sbjct: 328 SMWPNSSSPNLPTKTEEPPSL*TAQTTLAGAPPGALTKPPDSARETPATSGTKSISISPK 149
Query: 171 DTTRLLDXXXXXAPPSPRGA 112
TTR A SPRGA
Sbjct: 148 KTTRPGGAAAAGATASPRGA 89
Score = 62.0 bits (129), Expect(3) = 5e-024
Identities = 27/51 (52%), Positives = 35/51 (68%)
Frame = -1 / -1
Query: 685 GVGRRPEREAHVGVVGAEHARGLGCAHGGHVRRAARLGDERDGAVVEHPGA 533
G G+ P+R AH VV ++ + AHGG++ RA LGDERDGAVVEH G+
Sbjct: 662 GWGQGPQRRAHFVVVQPKNTPQIVRAHGGYMPRAPGLGDERDGAVVEHAGS 510
Score = 47.8 bits (98), Expect(3) = 5e-024
Identities = 19/23 (82%), Positives = 20/23 (86%)
Frame = -1 / -1
Query: 241 EAARLGQRQPGHVGDEVDQHLAE 173
EAA LG+R GHVGDEVDQHLAE
Sbjct: 218 EAAGLGERDAGHVGDEVDQHLAE 150
Score = 46.0 bits (94), Expect(3) = 5e-024
Identities = 22/29 (75%), Positives = 23/29 (79%)
Frame = -1 / -1
Query: 478 VPVEHELALPVVLERHEGQRRPRVLVEQA 392
V VEHELALPV R+EGQ R RVLVEQA
Sbjct: 455 VAVEHELALPVGP*RYEGQGRARVLVEQA 369
>gb|BF263628.2|BF263628 HV_CEa0007D23f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0007D23f, mRNA sequence
Length = 591
Score = 318 bits (689), Expect = 5e-086
Identities = 133/165 (80%), Positives = 145/165 (87%)
Frame = +2 / +3
Query: 95 SKRDQMAPLGDGGXXXXXXSNNLVVSFGEMLIDFVPDVAGLSLAESGGFVKAPGGAPANV 274
S+ MAPLGD + LVVSFGEMLIDFVPDVAG+SLAESGGFVKAPGGAPANV
Sbjct: 81 SQEPPMAPLGDAVAPAAAAAPGLVVSFGEMLIDFVPDVAGVSLAESGGFVKAPGGAPANV 260
Query: 275 ACAIAKLGGSSAFVGKFGDDEFGHMLVNILKQNNVNSEGCLFDKHARTALAFVTLKHDGE 454
ACA++KLGGSSAFVGKFGDDEFGHMLV ILKQN VN+EGCLFD+HART LAFVTLK +GE
Sbjct: 261 ACAVSKLGGSSAFVGKFGDDEFGHMLVEILKQNGVNAEGCLFDQHARTGLAFVTLKANGE 440
Query: 455 REFMFYRNPSADMLLTEAELDLGLVRRARVFHYGSISLISEPCRS 589
REFMFYRNPSADMLLTEAEL+L L+RRAR+ HYGSIS I+EPCRS
Sbjct: 441 REFMFYRNPSADMLLTEAELNLDLIRRARIXHYGSISAITEPCRS 575
Score = 180 bits (388), Expect(2) = 3e-050
Identities = 85/124 (68%), Positives = 89/124 (71%)
Frame = -2 / -3
Query: 480 GFL*NMNSRSPSCLSVTKASAVRACLSNRHPSEFTLFCFRMFTNMCPNSSSPNLPTKAED 301
G *NMNSRSP LSVTKA VRAC SNR PS T FCFR+ T+M PNSSSPNLPTKAE+
Sbjct: 466 GLR*NMNSRSPLALSVTKARPVRACWSNRQPSALTPFCFRISTSMWPNSSSPNLPTKAEE 287
Query: 300 PPSLAMAQATLAGAPPGALTKXXXXXXXXXATSGTKSISISPNDTTRLLDXXXXXAPPSP 121
PPSL AQATLAGAPPGALTK ATSGTKSISISP +TTR A SP
Sbjct: 286 PPSLETAQATLAGAPPGALTKPPDSASETPATSGTKSISISPKETTRPGAAAAAGATASP 107
Query: 120 RGAI 109
RGAI
Sbjct: 106 RGAI 95
Score = 39.6 bits (80), Expect(2) = 3e-050
Identities = 17/24 (70%), Positives = 18/24 (75%)
Frame = -1 / -2
Query: 604 GGHVRRAARLGDERDGAVVEHPGA 533
GG VRRAA LGD RDGAVV G+
Sbjct: 590 GGDVRRAAGLGDSRDGAVVXDAGS 519
>gb|CV060879.1|CV060879 BNEL62c7 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL62c7 5' similar to putative
fructokinase II, mRNA sequence
Length = 560
Score = 318 bits (689), Expect = 5e-086
Identities = 133/164 (81%), Positives = 146/164 (89%)
Frame = +2 / +3
Query: 95 SKRDQMAPLGDGGXXXXXXSNNLVVSFGEMLIDFVPDVAGLSLAESGGFVKAPGGAPANV 274
S+ MAPLGD + LVVSFGEMLIDFVPDVAG+SLAESGGFVKAPGGAPANV
Sbjct: 69 SQDPPMAPLGDAVAPAAAAAPGLVVSFGEMLIDFVPDVAGVSLAESGGFVKAPGGAPANV 248
Query: 275 ACAIAKLGGSSAFVGKFGDDEFGHMLVNILKQNNVNSEGCLFDKHARTALAFVTLKHDGE 454
ACA++KLGGSSAFVGKFGDDEFGHMLV ILKQN VN+EGCLFD++ART LAFVTLK +GE
Sbjct: 249 ACAVSKLGGSSAFVGKFGDDEFGHMLVEILKQNGVNAEGCLFDQYARTVLAFVTLKANGE 428
Query: 455 REFMFYRNPSADMLLTEAELDLGLVRRARVFHYGSISLISEPCR 586
REFMFYRNPSADMLLTEAEL+L L+RRAR+FHYGSISLI+EPCR
Sbjct: 429 REFMFYRNPSADMLLTEAELNLDLIRRARIFHYGSISLITEPCR 560
Score = 194 bits (419), Expect = 8e-049
Identities = 96/159 (60%), Positives = 100/159 (62%)
Frame = -2 / -2
Query: 585 RHGSEMSEMEP*WNTLXXXXXXXXXXXXXXXXXALGFL*NMNSRSPSCLSVTKASAVRAC 406
R GS MSEMEP*W A G *NMNSRSP LSVTKA VRA
Sbjct: 559 RQGSVMSEMEP*WKMRARRMRSRLSSASVSSMSADGLR*NMNSRSPLALSVTKARTVRAY 380
Query: 405 LSNRHPSEFTLFCFRMFTNMCPNSSSPNLPTKAEDPPSLAMAQATLAGAPPGALTKXXXX 226
SNR PS T FCFR+ T+M PNSSSPNLPTKAE+PPSL AQATLAGAPPGALTK
Sbjct: 379 WSNRQPSALTPFCFRISTSMWPNSSSPNLPTKAEEPPSLETAQATLAGAPPGALTKPPDS 200
Query: 225 XXXXXATSGTKSISISPNDTTRLLDXXXXXAPPSPRGAI 109
ATSGTKSISISP +TTR A SPRGAI
Sbjct: 199 ASETPATSGTKSISISPKETTRPGAAAAAGATASPRGAI 83
>gb|BE214310.3|BE214310 HV_CEb0003B05f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0003B05f, mRNA sequence
Length = 692
Score = 318 bits (688), Expect = 7e-086
Identities = 136/215 (63%), Positives = 162/215 (75%)
Frame = +2 / +1
Query: 161 LVVSFGEMLIDFVPDVAGLSLAESGGFVKAPGGAPANVACAIAKLGGSSAFVGKFGDDEF 340
LVVSFGEMLIDFVP VAG+SLAE+ FVKAPGGAPANVA A+A+LGG +AFVGK GDDEF
Sbjct: 43 LVVSFGEMLIDFVPTVAGVSLAEAPAFVKAPGGAPANVAIAVARLGGGAAFVGKLGDDEF 222
Query: 341 GHMLVNILKQNNVNSEGCLFDKHARTALAFVTLKHDGEREFMFYRNPSADMLLTEAELDL 520
G ML IL+ N V++ G +FD ARTALAFVTL+ DGEREFMFYRNPSADMLLT EL++
Sbjct: 223 GRMLAAILRDNGVDAGGVVFDSGARTALAFVTLRADGEREFMFYRNPSADMLLTADELNV 402
Query: 521 GLVRRARVFHYGSISLISEPCRSXXXXXXXXXXXXGVLCSYDPNVRLPLWPSPDAAREGI 700
+++RA VFHYGSISLI+EPCR+ G L SYDPN+R LWPS + AR I
Sbjct: 403 DVIKRAAVFHYGSISLIAEPCRTAHLRAMKVAKEAGALLSYDPNLREALWPSLEEARTKI 582
Query: 701 LSIWKEADFIKVSDDEVAFLTRGDANDEKNVLSLW 805
LSIW +AD +KVS+ E+ FLT + + + LW
Sbjct: 583 LSIWDQADIVKVSEVELEFLTGINLGGDDVAMKLW 687
Score = 183 bits (394), Expect = 2e-045
Identities = 98/200 (49%), Positives = 112/200 (56%)
Frame = -2 / -1
Query: 762 VRKATSSSLTLMKSASFQMLRMPSRAASGDGQSGRRTLGS*EQSTPXXXXXXXXXXXAER 583
V+ ++S+SLTL SA QML++ RA+S DG + GS E+S P A R
Sbjct: 644 VKNSSSTSLTLTMSAWSQMLKILVRASSRDGHNASLRFGSYERSAPASLATFMARRCAVR 465
Query: 582 HGSEMSEMEP*WNTLXXXXXXXXXXXXXXXXXALGFL*NMNSRSPSCLSVTKASAVRACL 403
GS + ++P*W T ALG *NMNSRSPS SVTKASAVRA
Sbjct: 464 QGSAIKLIDP*WKTAALLMTSTLSSSAVRSMSALGLR*NMNSRSPSARSVTKASAVRAPE 285
Query: 402 SNRHPSEFTLFCFRMFTNMCPNSSSPNLPTKAEDPPSLAMAQATLAGAPPGALTKXXXXX 223
S P T RM +M PNSSSP+LPTKA PP A A ATLAGAPPGALTK
Sbjct: 284 SKTTPPASTPLSRRMAASMRPNSSSPSLPTKAAPPPRRATAMATLAGAPPGALTKAGASA 105
Query: 222 XXXXATSGTKSISISPNDTT 163
AT GTKSISISP TT
Sbjct: 104 SDTPATVGTKSISISPKLTT 45
>gb|BF261002.3|BF261002 HVSMEf0023I02f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0023I02f, mRNA sequence
Length = 728
Score = 314 bits (680), Expect = 8e-085
Identities = 136/223 (60%), Positives = 167/223 (74%)
Frame = +2 / +1
Query: 161 LVVSFGEMLIDFVPDVAGLSLAESGGFVKAPGGAPANVACAIAKLGGSSAFVGKFGDDEF 340
LVVSFGEMLIDFVP VAG+SLAE+ FVKAPGGAPANVA A+A+LGG +AFVGK GDDEF
Sbjct: 58 LVVSFGEMLIDFVPTVAGVSLAEAPAFVKAPGGAPANVAIAVARLGGGAAFVGKLGDDEF 237
Query: 341 GHMLVNILKQNNVNSEGCLFDKHARTALAFVTLKHDGEREFMFYRNPSADMLLTEAELDL 520
G ML IL+ N V++ G +FD ARTALAFVTL+ DGEREFMFYRNPSADMLLT EL++
Sbjct: 238 GRMLAGILRDNGVDAGGVVFDSGARTALAFVTLRADGEREFMFYRNPSADMLLTADELNV 417
Query: 521 GLVRRARVFHYGSISLISEPCRSXXXXXXXXXXXXGVLCSYDPNVRLPLWPSPDAAREGI 700
+++RA VFHYGSISLI+EPCR+ G L SYDPN+R LWPS + AR I
Sbjct: 418 DVIKRAAVFHYGSISLIAEPCRTVHLRAMKVAKEAGALLSYDPNLREALWPSLEEARTKI 597
Query: 701 LSIWKEADFIKVSDDEVAFLTRGDANDEKNVLSLWFDGLKLLV 829
LSIW +AD +KVS+ ++ FLT ++ ++ L + KL++
Sbjct: 598 LSIWDQADIVKVSEVDLEFLTGINSVEDDVALKVCRPTFKLML 726
Score = 181 bits (390), Expect = 8e-045
Identities = 97/200 (48%), Positives = 110/200 (55%)
Frame = -2 / -1
Query: 762 VRKATSSSLTLMKSASFQMLRMPSRAASGDGQSGRRTLGS*EQSTPXXXXXXXXXXXAER 583
V+ + S+SLTL SA QML++ RA+S DG + GS E+S P R
Sbjct: 659 VKNSRSTSLTLTMSAWSQMLKILVRASSRDGHNASLRFGSYERSAPASLATFMARRCTVR 480
Query: 582 HGSEMSEMEP*WNTLXXXXXXXXXXXXXXXXXALGFL*NMNSRSPSCLSVTKASAVRACL 403
GS + ++P*W T ALG *NMNSRSPS SVTKASAVRA
Sbjct: 479 QGSAIKLIDP*WKTAALLMTSTLSSSAVRSMSALGLR*NMNSRSPSARSVTKASAVRAPE 300
Query: 402 SNRHPSEFTLFCFRMFTNMCPNSSSPNLPTKAEDPPSLAMAQATLAGAPPGALTKXXXXX 223
S P T RM +M PNSSSP+LPTKA PP A A ATLAGAPPGALTK
Sbjct: 299 SKTTPPASTPLSRRMPASMRPNSSSPSLPTKAAPPPRRATAMATLAGAPPGALTKAGASA 120
Query: 222 XXXXATSGTKSISISPNDTT 163
AT GTKSISISP TT
Sbjct: 119 SDTPATVGTKSISISPKLTT 60
>gb|CA012659.1|CA012659 HT06A23r HT Hordeum vulgare subsp. vulgare cDNA clone HT06A23
5-PRIME, mRNA sequence
Length = 663
Score = 312 bits (676), Expect = 3e-084
Identities = 128/218 (58%), Positives = 163/218 (74%)
Frame = +2 / +1
Query: 284 IAKLGGSSAFVGKFGDDEFGHMLVNILKQNNVNSEGCLFDKHARTALAFVTLKHDGEREF 463
+A+LGG +AFVGK GDDEFG ML IL+ N V++ G +FD ARTALAFVTL+ DGEREF
Sbjct: 10 VARLGGGAAFVGKLGDDEFGRMLAAILRDNGVDAGGVVFDSGARTALAFVTLRADGEREF 189
Query: 464 MFYRNPSADMLLTEAELDLGLVRRARVFHYGSISLISEPCRSXXXXXXXXXXXXGVLCSY 643
MFYRNPSADMLLT EL++ +++RA VFHYGSISLI+EPCR+ G L SY
Sbjct: 190 MFYRNPSADMLLTADELNVDVIKRAAVFHYGSISLIAEPCRTAHLRAMKVAKEAGALLSY 369
Query: 644 DPNVRLPLWPSPDAAREGILSIWKEADFIKVSDDEVAFLTRGDANDEKNVLSLWFDGLKL 823
DPN+R LWPS + AR ILSIW +AD +KVS+ E+ FLT ++ ++ + LW KL
Sbjct: 370 DPNLREALWPSLEEARTKILSIWDQADIVKVSEVELEFLTGINSVEDDVAMKLWRPTFKL 549
Query: 824 LVVTDGDKGCRYFTKDFKGSVPGFKVDTVDTTGAGDAF 937
+++T GD+GC+Y+TKDF+G+VP +KV VDTTGAGDAF
Sbjct: 550 MLITLGDQGCKYYTKDFRGAVPSYKVQQVDTTGAGDAF 663
Score = 130 bits (278), Expect(2) = 6e-037
Identities = 71/159 (44%), Positives = 85/159 (53%)
Frame = -2 / -2
Query: 762 VRKATSSSLTLMKSASFQMLRMPSRAASGDGQSGRRTLGS*EQSTPXXXXXXXXXXXAER 583
V+ ++S+SLTL SA QML++ RA+S DG + GS E+S P A R
Sbjct: 488 VKNSSSTSLTLTMSAWSQMLKILVRASSRDGHNASLRFGSYERSAPASLATFMARRCAVR 309
Query: 582 HGSEMSEMEP*WNTLXXXXXXXXXXXXXXXXXALGFL*NMNSRSPSCLSVTKASAVRACL 403
GS + ++P*W T ALG *NMNSRSPS SVTKASAVRA
Sbjct: 308 QGSAIKLIDP*WKTAALLMTSTLSSSAVRSMSALGLR*NMNSRSPSARSVTKASAVRAPE 129
Query: 402 SNRHPSEFTLFCFRMFTNMCPNSSSPNLPTKAEDPPSLA 286
S P T RM +M PNSSSP+LPTKA PP A
Sbjct: 128 SKTTPPASTPLSRRMAASMRPNSSSPSLPTKAAPPPRRA 12
Score = 45.1 bits (92), Expect(2) = 6e-037
Identities = 21/28 (75%), Positives = 21/28 (75%)
Frame = -2 / -2
Query: 933 ASPAPVVSTVSTLKPGTLPLKSLVKYLH 850
ASPAPVVST TL GT P KSLV YLH
Sbjct: 659 ASPAPVVSTCCTL*DGTAPRKSLV*YLH 576
>gb|BF263526.1|BF263526 HV_CEa0006P16f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0006P16f, mRNA sequence
Length = 909
Score = 275 bits (594), Expect(3) = 2e-083
Identities = 118/165 (71%), Positives = 131/165 (79%)
Frame = +2 / +3
Query: 95 SKRDQMAPLGDGGXXXXXXSNNLVVSFGEMLIDFVPDVAGLSLAESGGFVKAPGGAPANV 274
S+ APLGD + LVVSFGEMLIDFVPDVAG+SLAESGGFVKAPGGAPANV
Sbjct: 78 SQEPPPAPLGDAVAPAAAAAPGLVVSFGEMLIDFVPDVAGVSLAESGGFVKAPGGAPANV 257
Query: 275 ACAIAKLGGSSAFVGKFGDDEFGHMLVNILKQNNVNSEGCLFDKHARTALAFVTLKHDGE 454
ACA++KLGGSSAFVGKFGDDEFGHMLV IL QN VN+EGCLF++HARTALAFVTLK +GE
Sbjct: 258 ACAVSKLGGSSAFVGKFGDDEFGHMLVEILNQNGVNAEGCLFNQHARTALAFVTLKANGE 437
Query: 455 REFMFYRNPSADMLLTEAELDLGLVRRARVFHYGSISLISEPCRS 589
REFM+YRNPSADMLLTEAEL F+ G+ + PCRS
Sbjct: 438 REFMYYRNPSADMLLTEAELTWA*SAERASFNTGASGSLPRPCRS 572
Score = 168 bits (362), Expect(3) = 7e-048
Identities = 82/123 (66%), Positives = 86/123 (69%)
Frame = -2 / -3
Query: 480 GFL*NMNSRSPSCLSVTKASAVRACLSNRHPSEFTLFCFRMFTNMCPNSSSPNLPTKAED 301
G * MNSRSP LSVTKA AVRAC NR PS T F FR+ T+M PNSSSPNLPTKAE+
Sbjct: 463 GLR*YMNSRSPLALSVTKARAVRACWLNRQPSALTPF*FRISTSMWPNSSSPNLPTKAEE 284
Query: 300 PPSLAMAQATLAGAPPGALTKXXXXXXXXXATSGTKSISISPNDTTRLLDXXXXXAPPSP 121
PPSL AQATLAGAPPGALTK ATSGTKSISISP +TTR A SP
Sbjct: 283 PPSLETAQATLAGAPPGALTKPPDSASETPATSGTKSISISPKETTRPGAAAAAGATASP 104
Query: 120 RGA 112
RGA
Sbjct: 103 RGA 95
Score = 44.1 bits (90), Expect(3) = 2e-083
Identities = 17/35 (48%), Positives = 21/35 (60%)
Frame = +2 / +1
Query: 626 GVLCSYDPNVRLPLWPSPDAAREGILSIWKEADFI 730
G+LC DPNVRLP WP A + + +EAD I
Sbjct: 610 GILCLCDPNVRLPFWPLAQAGGDWFMVFLEEADCI 714
Score = 34.5 bits (69), Expect(3) = 7e-048
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = -1 / -1
Query: 730 DEVGLLPDAEDALACGVGRRPEREAHVGVVGAEHA 626
D +GLL + + + + PER+AHVGV A+ A
Sbjct: 714 DAIGLLQEDHKPVTARLSQGPERQAHVGVAQAKDA 610
Score = 30.9 bits (61), Expect(3) = 2e-083
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = +1 / +2
Query: 577 AVPLGAHGRHARSQ 618
AVPLGA GRHAR Q
Sbjct: 560 AVPLGARGRHARCQ 601
Score = 27.2 bits (53), Expect(3) = 7e-048
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -1 / -2
Query: 619 LGCAHGGHVRRAAR 578
LG AH HVRRAAR
Sbjct: 602 LGSAHAVHVRRAAR 561
>gb|CA007382.1|CA007382 HU07M08r HU Hordeum vulgare subsp. vulgare cDNA clone HU07M08
5-PRIME, mRNA sequence
Length = 544
Score = 306 bits (663), Expect = 2e-082
Identities = 125/147 (85%), Positives = 139/147 (94%)
Frame = +2 / +1
Query: 674 SPDAAREGILSIWKEADFIKVSDDEVAFLTRGDANDEKNVLSLWFDGLKLLVVTDGDKGC 853
S AAR+GI+SIWKEADFIKVSDDEVAFLT+GDANDEKNVLSLWF+GLKLL+VTDG+KGC
Sbjct: 13 SAQAARDGIMSIWKEADFIKVSDDEVAFLTQGDANDEKNVLSLWFEGLKLLIVTDGEKGC 192
Query: 854 RYFTKDFKGSVPGFKVDTVDTTGAGDAFVGSLLVNVAKDDSIFHNEEKLREALKFSNACG 1033
RYFTKDFKGSVPG+ V+TVDTTGAGDAFVGSLLVNV+KDDSIF+NE KLRE L+FSNACG
Sbjct: 193 RYFTKDFKGSVPGYSVNTVDTTGAGDAFVGSLLVNVSKDDSIFYNEAKLREVLQFSNACG 372
Query: 1034 AICTTKKGAIPALPTVATAQDLIAKAN 1114
AICTTKKGAIPALPT ATA +LI+K +
Sbjct: 373 AICTTKKGAIPALPTTATALELISKGS 453
Score = 221 bits (478), Expect = 6e-057
Identities = 109/144 (75%), Positives = 111/144 (77%)
Frame = -2 / -3
Query: 1113 LALAMRSWAVATVGSAGMAPFLVVQMAPQALENLRASRSFSSLWKMESSLATLTRREPTK 934
L L M S AVA VGSAGMAPFLVVQMAPQA EN S S +SL KMESSL TLTRREPTK
Sbjct: 452 LPLLMSSRAVAVVGSAGMAPFLVVQMAPQAFENCSTSLSLASL*KMESSLETLTRREPTK 273
Query: 933 ASPAPVVSTVSTLKPGTLPLKSLVKYLHXXXXXXXXXXXXXSNHRDSTFFSSLASPRVRK 754
ASPAPVVSTV T PGT PLKSLVKYLH SN R+STFFSSLASP VRK
Sbjct: 272 ASPAPVVSTVLTE*PGTEPLKSLVKYLHPFSPSVTMSSLRPSNQRESTFFSSLASPWVRK 93
Query: 753 ATSSSLTLMKSASFQMLRMPSRAA 682
ATSSSLTLMKSASFQML MPSRAA
Sbjct: 92 ATSSSLTLMKSASFQMLMMPSRAA 21
Score = 128 bits (274), Expect = 8e-029
Identities = 54/71 (76%), Positives = 62/71 (87%)
Frame = -1 / -2
Query: 886 HAALEVLGEVPASLVPVGDDEQLEPVKPQGQHVLLVVGVPAREEGHLVVADLDEVGLLPD 707
H ALEVLGEVPASL+ VGDDEQLE ++P+G+HVLLVVGV EEGHL+VA LDEVGLLPD
Sbjct: 225 HGALEVLGEVPASLLAVGDDEQLEALEPEGEHVLLVVGVALGEEGHLIVAHLDEVGLLPD 46
Query: 706 AEDALACGVGR 674
A DA+A G+GR
Sbjct: 45 AHDAVAGGLGR 13
>gb|BI953414.1|BI953414 HVSMEm0012J13f Hordeum vulgare green seedling EST library
HVcDNA0014 (Blumeria infected) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEm0012J13f, mRNA sequence
Length = 848
Score = 303 bits (657), Expect = 1e-081
Identities = 129/164 (78%), Positives = 142/164 (86%)
Frame = +2 / +2
Query: 95 SKRDQMAPLGDGGXXXXXXSNNLVVSFGEMLIDFVPDVAGLSLAESGGFVKAPGGAPANV 274
S+ MAPLGD + LVVSFGEML +FVPDVAG+SLAESGGFVKAPGGAPANV
Sbjct: 71 SQEPPMAPLGDAVAPAAAAAPGLVVSFGEMLSEFVPDVAGVSLAESGGFVKAPGGAPANV 250
Query: 275 ACAIAKLGGSSAFVGKFGDDEFGHMLVNILKQNNVNSEGCLFDKHARTALAFVTLKHDGE 454
ACA++KLGGSSAFVGKFGDDEFGHMLV ILKQN VN+EGCLFD+HART LAFVTLK +GE
Sbjct: 251 ACAVSKLGGSSAFVGKFGDDEFGHMLVEILKQNGVNAEGCLFDQHARTGLAFVTLKANGE 430
Query: 455 REFMFYRNPSADMLLTEAELDLGLVRRARVFHYGSISLISEPCR 586
REFMFYRNPSADMLLTEAEL+L L+RRAR+ HYGSISLI+E R
Sbjct: 431 REFMFYRNPSADMLLTEAELNLDLMRRARMLHYGSISLITERWR 562
Score = 188 bits (404), Expect = 1e-046
Identities = 93/159 (58%), Positives = 99/159 (62%)
Frame = -2 / -3
Query: 585 RHGSEMSEMEP*WNTLXXXXXXXXXXXXXXXXXALGFL*NMNSRSPSCLSVTKASAVRAC 406
R S MSEM+P* N A G *NMNSRSP LSVTKA VRAC
Sbjct: 561 RQRSVMSEMDP*CNMRARRMRSRLSSASVSSMSADGLR*NMNSRSPLALSVTKARPVRAC 382
Query: 405 LSNRHPSEFTLFCFRMFTNMCPNSSSPNLPTKAEDPPSLAMAQATLAGAPPGALTKXXXX 226
SNR PS T FCFR+ T+M PNSSSPNLPTKAE+PPSL AQATLAGAPPGALTK
Sbjct: 381 WSNRQPSALTPFCFRISTSMWPNSSSPNLPTKAEEPPSLETAQATLAGAPPGALTKPPDS 202
Query: 225 XXXXXATSGTKSISISPNDTTRLLDXXXXXAPPSPRGAI 109
ATSGT S+SISP +TTR A SPRGAI
Sbjct: 201 ASETPATSGTNSLSISPKETTRPGAAAAAGATASPRGAI 85
>gb|CB880871.1|CB880871 HM08B05w HM Hordeum vulgare subsp. vulgare cDNA clone HM08B05
3-PRIME, mRNA sequence
Length = 584
Score = 303 bits (656), Expect = 2e-081
Identities = 123/143 (86%), Positives = 137/143 (95%)
Frame = +2 / -1
Query: 686 AREGILSIWKEADFIKVSDDEVAFLTRGDANDEKNVLSLWFDGLKLLVVTDGDKGCRYFT 865
AR+GI+SIWKEADFIKVSDDEVAFLT+GDANDEKNVLSLWF+GLKLL+VTDG+KGCRYFT
Sbjct: 584 ARDGIMSIWKEADFIKVSDDEVAFLTQGDANDEKNVLSLWFEGLKLLIVTDGEKGCRYFT 405
Query: 866 KDFKGSVPGFKVDTVDTTGAGDAFVGSLLVNVAKDDSIFHNEEKLREALKFSNACGAICT 1045
KDFKGSVPG+ V+TVDTTGAGDAFVGSLLVNV+KDDSIF+NE KLRE L+FSNACGAICT
Sbjct: 404 KDFKGSVPGYSVNTVDTTGAGDAFVGSLLVNVSKDDSIFYNEAKLREVLQFSNACGAICT 225
Query: 1046 TKKGAIPALPTVATAQDLIAKAN 1114
TKKGAIPALPT ATA +LI+K +
Sbjct: 224 TKKGAIPALPTTATALELISKGS 156
Score = 218 bits (470), Expect = 8e-056
Identities = 107/142 (75%), Positives = 109/142 (76%)
Frame = -2 / +1
Query: 1113 LALAMRSWAVATVGSAGMAPFLVVQMAPQALENLRASRSFSSLWKMESSLATLTRREPTK 934
L L M S AVA VGSAGMAPFLVVQMAPQA EN S S +SL KMESSL TLTRREPTK
Sbjct: 157 LPLLMSSRAVAVVGSAGMAPFLVVQMAPQAFENCSTSLSLASL*KMESSLETLTRREPTK 336
Query: 933 ASPAPVVSTVSTLKPGTLPLKSLVKYLHXXXXXXXXXXXXXSNHRDSTFFSSLASPRVRK 754
ASPAPVVSTV T PGT PLKSLVKYLH SN R+STFFSSLASP VRK
Sbjct: 337 ASPAPVVSTVLTE*PGTEPLKSLVKYLHPFSPSVTMSSLRPSNQRESTFFSSLASPWVRK 516
Query: 753 ATSSSLTLMKSASFQMLRMPSR 688
ATSSSLTLMKSASFQML MPSR
Sbjct: 517 ATSSSLTLMKSASFQMLMMPSR 582
Score = 121 bits (259), Expect = 1e-026
Identities = 51/66 (77%), Positives = 58/66 (87%)
Frame = -1 / +3
Query: 886 HAALEVLGEVPASLVPVGDDEQLEPVKPQGQHVLLVVGVPAREEGHLVVADLDEVGLLPD 707
H ALEVLGEVPASL+ VGDDEQLE ++P+G+HVLLVVGV EEGHL+VA LDEVGLLPD
Sbjct: 384 HGALEVLGEVPASLLAVGDDEQLEALEPEGEHVLLVVGVALGEEGHLIVAHLDEVGLLPD 563
Query: 706 AEDALA 689
A DA+A
Sbjct: 564 AHDAVA 581
>gb|BG343619.2|BG343619 HVSMEg0006A18f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0006A18f, mRNA sequence
Length = 734
Score = 300 bits (650), Expect = 1e-080
Identities = 122/140 (87%), Positives = 135/140 (96%)
Frame = +2 / +2
Query: 686 AREGILSIWKEADFIKVSDDEVAFLTRGDANDEKNVLSLWFDGLKLLVVTDGDKGCRYFT 865
AR+GI+SIWKEADFIKVSDDEVAFLT+GDANDEKNVLSLWF+GLKLL+VTDG+KGCRYFT
Sbjct: 2 ARDGIMSIWKEADFIKVSDDEVAFLTQGDANDEKNVLSLWFEGLKLLIVTDGEKGCRYFT 181
Query: 866 KDFKGSVPGFKVDTVDTTGAGDAFVGSLLVNVAKDDSIFHNEEKLREALKFSNACGAICT 1045
KDFKGSVPG+ V+TVDTTGAGDAFVGSLLVNV+KDDSIF+NE KLRE L+FSNACGAICT
Sbjct: 182 KDFKGSVPGYSVNTVDTTGAGDAFVGSLLVNVSKDDSIFYNEAKLREVLQFSNACGAICT 361
Query: 1046 TKKGAIPALPTVATAQDLIA 1105
TKKGAIPALPT ATA +LI+
Sbjct: 362 TKKGAIPALPTTATALELIS 421
Score = 219 bits (472), Expect = 4e-056
Identities = 107/143 (74%), Positives = 110/143 (76%)
Frame = -2 / -3
Query: 1113 LALAMRSWAVATVGSAGMAPFLVVQMAPQALENLRASRSFSSLWKMESSLATLTRREPTK 934
L + M S AVA VGSAGMAPFLVVQMAPQA EN S S +SL KMESSL TLTRREPTK
Sbjct: 429 LPMLMSSRAVAVVGSAGMAPFLVVQMAPQAFENCSTSLSLASL*KMESSLETLTRREPTK 250
Query: 933 ASPAPVVSTVSTLKPGTLPLKSLVKYLHXXXXXXXXXXXXXSNHRDSTFFSSLASPRVRK 754
ASPAPVVSTV T PGT PLKSLVKYLH SN R+STFFSSLASP VRK
Sbjct: 249 ASPAPVVSTVLTE*PGTEPLKSLVKYLHPFSPSVTMSSLRPSNQRESTFFSSLASPWVRK 70
Query: 753 ATSSSLTLMKSASFQMLRMPSRA 685
ATSSSLTLMKSASFQML MPSRA
Sbjct: 69 ATSSSLTLMKSASFQMLMMPSRA 1
Score = 121 bits (259), Expect = 1e-026
Identities = 51/66 (77%), Positives = 58/66 (87%)
Frame = -1 / -2
Query: 886 HAALEVLGEVPASLVPVGDDEQLEPVKPQGQHVLLVVGVPAREEGHLVVADLDEVGLLPD 707
H ALEVLGEVPASL+ VGDDEQLE ++P+G+HVLLVVGV EEGHL+VA LDEVGLLPD
Sbjct: 202 HGALEVLGEVPASLLAVGDDEQLEALEPEGEHVLLVVGVALGEEGHLIVAHLDEVGLLPD 23
Query: 706 AEDALA 689
A DA+A
Sbjct: 22 AHDAVA 5
>gb|BI958022.1|BI958022 HVSMEn0012P20f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0012P20f, mRNA sequence
Length = 803
Score = 292 bits (632), Expect(2) = 1e-078
Identities = 123/154 (79%), Positives = 134/154 (87%)
Frame = +2 / +2
Query: 95 SKRDQMAPLGDGGXXXXXXSNNLVVSFGEMLIDFVPDVAGLSLAESGGFVKAPGGAPANV 274
S+ MAPLGD + LVVSFGEMLIDFVPDVAG+SLAESGGFVKAPGGAPANV
Sbjct: 56 SQEPPMAPLGDAVAPAAAAAPGLVVSFGEMLIDFVPDVAGVSLAESGGFVKAPGGAPANV 235
Query: 275 ACAIAKLGGSSAFVGKFGDDEFGHMLVNILKQNNVNSEGCLFDKHARTALAFVTLKHDGE 454
ACA++KLGGSSAFVGKFGDDEFGHMLV ILKQN VN+EGCLFD+HARTALAFVTLK +GE
Sbjct: 236 ACAVSKLGGSSAFVGKFGDDEFGHMLVEILKQNGVNAEGCLFDQHARTALAFVTLKANGE 415
Query: 455 REFMFYRNPSADMLLTEAELDLGLVRRARVFHYG 556
REFMFYRNPSADMLLTE EL+L L+RRAR+F G
Sbjct: 416 REFMFYRNPSADMLLTEGELNLDLIRRARIFPLG 517
Score = 182 bits (393), Expect = 3e-045
Identities = 86/124 (69%), Positives = 90/124 (72%)
Frame = -2 / -3
Query: 480 GFL*NMNSRSPSCLSVTKASAVRACLSNRHPSEFTLFCFRMFTNMCPNSSSPNLPTKAED 301
G *NMNSRSP LSVTKA AVRAC SNR PS T FCFR+ T+M PNSSSPNLPTKAE+
Sbjct: 441 GLR*NMNSRSPLALSVTKARAVRACWSNRQPSALTPFCFRISTSMWPNSSSPNLPTKAEE 262
Query: 300 PPSLAMAQATLAGAPPGALTKXXXXXXXXXATSGTKSISISPNDTTRLLDXXXXXAPPSP 121
PPSL AQATLAGAPPGALTK ATSGTKSISISP +TTR A SP
Sbjct: 261 PPSLETAQATLAGAPPGALTKPPDSASETPATSGTKSISISPKETTRPGAAAAAGATASP 82
Query: 120 RGAI 109
RGAI
Sbjct: 81 RGAI 70
Score = 22.6 bits (43), Expect(2) = 1e-078
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +1 / +3
Query: 583 PLGAHGRHAR 612
PLGA RHAR
Sbjct: 546 PLGARSRHAR 575
>gb|BQ768499.1|BQ768499 EBro08_SQ011_K21_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ011_K21 5', mRNA sequence
Length = 520
Score = 290 bits (627), Expect = 2e-077
Identities = 122/150 (81%), Positives = 133/150 (88%)
Frame = +2 / +1
Query: 95 SKRDQMAPLGDGGXXXXXXSNNLVVSFGEMLIDFVPDVAGLSLAESGGFVKAPGGAPANV 274
S+ MAPLGD + LVVSFGEMLIDFVPDVAG+SLAESGGFVKAPGGAPANV
Sbjct: 70 SQEPPMAPLGDAVAPAAAAAPGLVVSFGEMLIDFVPDVAGVSLAESGGFVKAPGGAPANV 249
Query: 275 ACAIAKLGGSSAFVGKFGDDEFGHMLVNILKQNNVNSEGCLFDKHARTALAFVTLKHDGE 454
ACA++KLGGSSAFVGKFGDDEFGHMLV ILKQN VN+EGCLFD+HARTALAFVTLK +GE
Sbjct: 250 ACAVSKLGGSSAFVGKFGDDEFGHMLVEILKQNGVNAEGCLFDQHARTALAFVTLKANGE 429
Query: 455 REFMFYRNPSADMLLTEAELDLGLVRRARV 544
REFMFYRNPSADMLLTEAEL+L L+RRAR+
Sbjct: 430 REFMFYRNPSADMLLTEAELNLDLIRRARI 519
Score = 182 bits (393), Expect = 3e-045
Identities = 86/124 (69%), Positives = 90/124 (72%)
Frame = -2 / -3
Query: 480 GFL*NMNSRSPSCLSVTKASAVRACLSNRHPSEFTLFCFRMFTNMCPNSSSPNLPTKAED 301
G *NMNSRSP LSVTKA AVRAC SNR PS T FCFR+ T+M PNSSSPNLPTKAE+
Sbjct: 455 GLR*NMNSRSPLALSVTKARAVRACWSNRQPSALTPFCFRISTSMWPNSSSPNLPTKAEE 276
Query: 300 PPSLAMAQATLAGAPPGALTKXXXXXXXXXATSGTKSISISPNDTTRLLDXXXXXAPPSP 121
PPSL AQATLAGAPPGALTK ATSGTKSISISP +TTR A SP
Sbjct: 275 PPSLETAQATLAGAPPGALTKPPDSASETPATSGTKSISISPKETTRPGAAAAAGATASP 96
Query: 120 RGAI 109
RGAI
Sbjct: 95 RGAI 84
>gb|BQ469460.1|BQ469460 HM04N23r HM Hordeum vulgare subsp. vulgare cDNA clone HM04N23
5-PRIME, mRNA sequence
Length = 552
Score = 286 bits (619), Expect = 2e-076
Identities = 123/182 (67%), Positives = 142/182 (78%)
Frame = +2 / +2
Query: 161 LVVSFGEMLIDFVPDVAGLSLAESGGFVKAPGGAPANVACAIAKLGGSSAFVGKFGDDEF 340
LVVSFGEMLIDFVP VAG+SLAE+ FVKAPGGAPANVA A+A+LGG +AFVGK GDDEF
Sbjct: 5 LVVSFGEMLIDFVPTVAGVSLAEAPAFVKAPGGAPANVAIAVARLGGGAAFVGKLGDDEF 184
Query: 341 GHMLVNILKQNNVNSEGCLFDKHARTALAFVTLKHDGEREFMFYRNPSADMLLTEAELDL 520
G ML IL+ N V++ G +FD ARTALAFVTL+ DGEREFMFYRNPSADMLLT EL++
Sbjct: 185 GRMLAAILRDNGVDAGGVVFDSGARTALAFVTLRADGEREFMFYRNPSADMLLTADELNV 364
Query: 521 GLVRRARVFHYGSISLISEPCRSXXXXXXXXXXXXGVLCSYDPNVRLPLWPSPDAAREGI 700
+++RA VFHYGSISLI+EPCR+ G L SYDPN+R LWPS + AR I
Sbjct: 365 DVIKRAAVFHYGSISLIAEPCRTAHLRAMKVAKEAGALLSYDPNLREALWPSLEEARTKI 544
Query: 701 LS 706
LS
Sbjct: 545 LS 550
Score = 166 bits (358), Expect = 2e-040
Identities = 89/182 (48%), Positives = 99/182 (54%)
Frame = -2 / -1
Query: 708 MLRMPSRAASGDGQSGRRTLGS*EQSTPXXXXXXXXXXXAERHGSEMSEMEP*WNTLXXX 529
ML++ RA+S DG + GS E+S P A R GS + ++P*W T
Sbjct: 552 MLKILVRASSRDGHNASLRFGSYERSAPASLATFMARRCAVRQGSAIKLIDP*WKTAALL 373
Query: 528 XXXXXXXXXXXXXXALGFL*NMNSRSPSCLSVTKASAVRACLSNRHPSEFTLFCFRMFTN 349
ALG *NMNSRSPS SVTKASAVRA S P T RM +
Sbjct: 372 MTSTLSSSAVRSMSALGLR*NMNSRSPSARSVTKASAVRAPESKTTPPASTPLSRRMAAS 193
Query: 348 MCPNSSSPNLPTKAEDPPSLAMAQATLAGAPPGALTKXXXXXXXXXATSGTKSISISPND 169
M PNSSSP+LPTKA PP A A ATLAGAPPGALTK AT GTKSISISP
Sbjct: 192 MRPNSSSPSLPTKAAPPPRRATAMATLAGAPPGALTKAGASASDTPATVGTKSISISPKL 13
Query: 168 TT 163
TT
Sbjct: 12 TT 7
>gb|CA019577.1|CA019577 HV12G23r HV Hordeum vulgare subsp. vulgare cDNA clone HV12G23
5-PRIME, mRNA sequence
Length = 542
Score = 279 bits (604), Expect = 3e-074
Identities = 114/132 (86%), Positives = 126/132 (95%)
Frame = +2 / +2
Query: 719 ADFIKVSDDEVAFLTRGDANDEKNVLSLWFDGLKLLVVTDGDKGCRYFTKDFKGSVPGFK 898
ADFIKVSDDEVAFLT+GDANDEKNVLSLWF+GLKLL+VTDG+KGCRYFTKDFKGSVPG+
Sbjct: 11 ADFIKVSDDEVAFLTQGDANDEKNVLSLWFEGLKLLIVTDGEKGCRYFTKDFKGSVPGYS 190
Query: 899 VDTVDTTGAGDAFVGSLLVNVAKDDSIFHNEEKLREALKFSNACGAICTTKKGAIPALPT 1078
V+TVDTTGAGDAFVGSLLVNV+KDDSIF+NE KLRE L+FSNACGAICTTKKGAIPALPT
Sbjct: 191 VNTVDTTGAGDAFVGSLLVNVSKDDSIFYNEAKLREVLQFSNACGAICTTKKGAIPALPT 370
Query: 1079 VATAQDLIAKAN 1114
ATA +LI+K +
Sbjct: 371 TATALELISKGS 406
Score = 198 bits (426), Expect = 9e-050
Identities = 98/132 (74%), Positives = 100/132 (75%)
Frame = -2 / -3
Query: 1113 LALAMRSWAVATVGSAGMAPFLVVQMAPQALENLRASRSFSSLWKMESSLATLTRREPTK 934
L L M S AVA VGSAGMAPFLVVQMAPQA EN S S +SL KMESSL TLTRREPTK
Sbjct: 405 LPLLMSSRAVAVVGSAGMAPFLVVQMAPQAFENCSTSLSLASL*KMESSLETLTRREPTK 226
Query: 933 ASPAPVVSTVSTLKPGTLPLKSLVKYLHXXXXXXXXXXXXXSNHRDSTFFSSLASPRVRK 754
ASPAPVVSTV T PGT PLKSLVKYLH SN R+STFFSSLASP VRK
Sbjct: 225 ASPAPVVSTVLTE*PGTEPLKSLVKYLHPFSPSVTMSSLRPSNQRESTFFSSLASPWVRK 46
Query: 753 ATSSSLTLMKSA 718
ATSSSLTLMKSA
Sbjct: 45 ATSSSLTLMKSA 10
Score = 103 bits (219), Expect = 3e-021
Identities = 43/56 (76%), Positives = 49/56 (87%)
Frame = -1 / -2
Query: 886 HAALEVLGEVPASLVPVGDDEQLEPVKPQGQHVLLVVGVPAREEGHLVVADLDEVG 719
H ALEVLGEVPASL+ VGDDEQLE ++P+G+HVLLVVGV EEGHL+VA LDEVG
Sbjct: 178 HGALEVLGEVPASLLAVGDDEQLEALEPEGEHVLLVVGVALGEEGHLIVAHLDEVG 11
>gb|AL507576.1|AL507576 AL507576 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY06D17V 5',
mRNA sequence
Length = 700
Score = 278 bits (601), Expect = 7e-074
Identities = 114/134 (85%), Positives = 126/134 (94%)
Frame = +2 / -3
Query: 713 KEADFIKVSDDEVAFLTRGDANDEKNVLSLWFDGLKLLVVTDGDKGCRYFTKDFKGSVPG 892
KEADFIKVSDDEVAFLT+GDAND KNVLSLWF+GLKLL+VTDG+KGCRYFTKDFKGSVPG
Sbjct: 656 KEADFIKVSDDEVAFLTQGDANDXKNVLSLWFEGLKLLIVTDGEKGCRYFTKDFKGSVPG 477
Query: 893 FKVDTVDTTGAGDAFVGSLLVNVAKDDSIFHNEEKLREALKFSNACGAICTTKKGAIPAL 1072
+ V+TVDTTGAGDAFVGSLLVNV+KDDSI +NE KLRE L+FSNACGAICTTKKGAIPAL
Sbjct: 476 YSVNTVDTTGAGDAFVGSLLVNVSKDDSIXYNEAKLREVLQFSNACGAICTTKKGAIPAL 297
Query: 1073 PTVATAQDLIAKAN 1114
PT ATA +LI+K +
Sbjct: 296 PTTATALELISKGS 255
Score = 200 bits (431), Expect = 2e-050
Identities = 99/134 (73%), Positives = 101/134 (75%)
Frame = -2 / +1
Query: 1113 LALAMRSWAVATVGSAGMAPFLVVQMAPQALENLRASRSFSSLWKMESSLATLTRREPTK 934
L L M S AVA VGSAGMAPFLVVQMAPQA EN S S +SL KMESSL TLTRREPTK
Sbjct: 256 LPLLMSSRAVAVVGSAGMAPFLVVQMAPQAFENCSTSLSLASLXKMESSLETLTRREPTK 435
Query: 933 ASPAPVVSTVSTLKPGTLPLKSLVKYLHXXXXXXXXXXXXXSNHRDSTFFSSLASPRVRK 754
ASPAPVVSTV T PGT PLKSLVKYLH SN R+STF SSLASP VRK
Sbjct: 436 ASPAPVVSTVLTE*PGTEPLKSLVKYLHPFSPSVTMSSLRPSNQRESTFXSSLASPWVRK 615
Query: 753 ATSSSLTLMKSASF 712
ATSSSLTLMKSASF
Sbjct: 616 ATSSSLTLMKSASF 657
Score = 107 bits (229), Expect = 1e-022
Identities = 45/59 (76%), Positives = 51/59 (86%)
Frame = -1 / +3
Query: 886 HAALEVLGEVPASLVPVGDDEQLEPVKPQGQHVLLVVGVPAREEGHLVVADLDEVGLLP 710
H ALEVLGEVPASL+ VGDDEQLE ++P+G+HVL VVGV EEGHL+VA LDEVGLLP
Sbjct: 483 HGALEVLGEVPASLLAVGDDEQLEALEPEGEHVLXVVGVALGEEGHLIVAHLDEVGLLP 659
>gb|CA019641.1|CA019641 HV12K08r HV Hordeum vulgare subsp. vulgare cDNA clone HV12K08
5-PRIME, mRNA sequence
Length = 485
Score = 273 bits (590), Expect = 2e-072
Identities = 115/139 (82%), Positives = 123/139 (88%)
Frame = +2 / +2
Query: 95 SKRDQMAPLGDGGXXXXXXSNNLVVSFGEMLIDFVPDVAGLSLAESGGFVKAPGGAPANV 274
S+ MAPLGD + LVVSFGEMLIDFVPDVAG+SLAESGGFVKAPGGAPANV
Sbjct: 68 SQEPPMAPLGDAVAPAAAAAPGLVVSFGEMLIDFVPDVAGVSLAESGGFVKAPGGAPANV 247
Query: 275 ACAIAKLGGSSAFVGKFGDDEFGHMLVNILKQNNVNSEGCLFDKHARTALAFVTLKHDGE 454
ACA++KLGGSSAFVGKFGDDEFGHMLV ILKQN VN+EGCLFD+HARTALAFVTLK +GE
Sbjct: 248 ACAVSKLGGSSAFVGKFGDDEFGHMLVEILKQNGVNAEGCLFDQHARTALAFVTLKANGE 427
Query: 455 REFMFYRNPSADMLLTEAE 511
REFMFYRNPSADMLLTEAE
Sbjct: 428 REFMFYRNPSADMLLTEAE 484
Score = 182 bits (393), Expect = 3e-045
Identities = 86/124 (69%), Positives = 90/124 (72%)
Frame = -2 / -3
Query: 480 GFL*NMNSRSPSCLSVTKASAVRACLSNRHPSEFTLFCFRMFTNMCPNSSSPNLPTKAED 301
G *NMNSRSP LSVTKA AVRAC SNR PS T FCFR+ T+M PNSSSPNLPTKAE+
Sbjct: 453 GLR*NMNSRSPLALSVTKARAVRACWSNRQPSALTPFCFRISTSMWPNSSSPNLPTKAEE 274
Query: 300 PPSLAMAQATLAGAPPGALTKXXXXXXXXXATSGTKSISISPNDTTRLLDXXXXXAPPSP 121
PPSL AQATLAGAPPGALTK ATSGTKSISISP +TTR A SP
Sbjct: 273 PPSLETAQATLAGAPPGALTKPPDSASETPATSGTKSISISPKETTRPGAAAAAGATASP 94
Query: 120 RGAI 109
RGAI
Sbjct: 93 RGAI 82
>gb|BG308944.2|BG308944 HVSMEc0001A06f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0001A06f, mRNA sequence
Length = 828
Score = 270 bits (585), Expect(2) = 3e-072
Identities = 118/184 (64%), Positives = 138/184 (75%)
Frame = +2 / +2
Query: 170 SFGEMLIDFVPDVAGLSLAESGGFVKAPGGAPANVACAIAKLGGSSAFVGKFGDDEFGHM 349
SFGEML+DFVP VAG+SLAE+ F+KAPGGAPANV+ A+A+LGG +AFVGK GDDEFG M
Sbjct: 5 SFGEMLVDFVPTVAGVSLAEAPAFLKAPGGAPANVSIAVARLGGEAAFVGKLGDDEFGRM 184
Query: 350 LVNILKQNNVNSEGCLFDKHARTALAFVTLKHDGEREFMFYRNPSADMLLTEAELDLGLV 529
L IL+ N V+ +FD ARTALAFVTL+ DGEREFMFYRNPSADMLLT EL++ ++
Sbjct: 185 LAAILRDNAVDDGAVVFDAGARTALAFVTLRADGEREFMFYRNPSADMLLTADELNVDVM 364
Query: 530 RRARVFHYGSISLISEPCRSXXXXXXXXXXXXGVLCSYDPNVRLPLWPSPDAAREGILSI 709
+RA VFHYGSISLI+EPCRS G L SYDPN R W S + A ILSI
Sbjct: 365 KRAAVFHYGSISLIAEPCRSXHLRAMEIAKEAGALLSYDPNPREASWSSREEAPIKILSI 544
Query: 710 WKEA 721
W +A
Sbjct: 545 WDQA 556
Score = 151 bits (324), Expect = 1e-035
Identities = 80/179 (44%), Positives = 92/179 (51%)
Frame = -2 / -1
Query: 711 QMLRMPSRAASGDGQSGRRTLGS*EQSTPXXXXXXXXXXXAERHGSEMSEMEP*WNTLXX 532
Q+L++ A+S D GS E+S P +R GS + ++P*W T
Sbjct: 546 QILKILMGASSRDDHDASLGFGSYERSAPASLAISMARRCXDRQGSAIKLIDP*WKTAAL 367
Query: 531 XXXXXXXXXXXXXXXALGFL*NMNSRSPSCLSVTKASAVRACLSNRHPSEFTLFCFRMFT 352
ALG *NMNSRSPS SVTKASAVRA S T RM
Sbjct: 366 FMTSTLSSSAVRSMSALGLR*NMNSRSPSARSVTKASAVRAPASKTTAPSSTALSRRMAA 187
Query: 351 NMCPNSSSPNLPTKAEDPPSLAMAQATLAGAPPGALTKXXXXXXXXXATSGTKSISISP 175
++ PNSSSP+LPTKA PPS A A TLAGAPPGAL K AT GTKS SISP
Sbjct: 186 SIRPNSSSPSLPTKAASPPSRATAMETLAGAPPGALRKAGASASDTPATVGTKSTSISP 10
Score = 22.6 bits (43), Expect(2) = 3e-072
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +2 / +3
Query: 722 DFIKVSDDEVAFLTR 766
D KVS+ EV FLTR
Sbjct: 558 DIGKVSEAEVKFLTR 602
>gb|CA007881.1|CA007881 HU09E12r HU Hordeum vulgare subsp. vulgare cDNA clone HU09E12
5-PRIME, mRNA sequence
Length = 534
Score = 266 bits (576), Expect = 2e-070
Identities = 112/174 (64%), Positives = 133/174 (76%)
Frame = +2 / +1
Query: 239 FVKAPGGAPANVACAIAKLGGSSAFVGKFGDDEFGHMLVNILKQNNVNSEGCLFDKHART 418
FVKAPGGAPANVA A+A+LGG +AFVGK GDDEFG ML IL+ N V++ G +FD ART
Sbjct: 13 FVKAPGGAPANVAIAVARLGGGAAFVGKLGDDEFGRMLAAILRDNGVDAGGVVFDSGART 192
Query: 419 ALAFVTLKHDGEREFMFYRNPSADMLLTEAELDLGLVRRARVFHYGSISLISEPCRSXXX 598
ALAFVTL+ DGEREFMFYRNPSADMLLT EL++ +++RA VFHYGSISLI+EPCR+
Sbjct: 193 ALAFVTLRADGEREFMFYRNPSADMLLTADELNVDVIKRAAVFHYGSISLIAEPCRTAHL 372
Query: 599 XXXXXXXXXGVLCSYDPNVRLPLWPSPDAAREGILSIWKEADFIKVSDDEVAFL 760
G L SYDPN+R LWPS + AR ILSIW +AD +KVS+ E+ FL
Sbjct: 373 RAMKVAKEAGALLSYDPNLREALWPSLEEARTKILSIWDQADIVKVSEVELEFL 534
Score = 159 bits (342), Expect = 3e-038
Identities = 84/174 (48%), Positives = 98/174 (56%)
Frame = -2 / -2
Query: 759 RKATSSSLTLMKSASFQMLRMPSRAASGDGQSGRRTLGS*EQSTPXXXXXXXXXXXAERH 580
+ ++S+SLTL SA QML++ RA+S DG + GS E+S P A R
Sbjct: 533 KNSSSTSLTLTMSAWSQMLKILVRASSRDGHNASLRFGSYERSAPASLATFMARRCAVRQ 354
Query: 579 GSEMSEMEP*WNTLXXXXXXXXXXXXXXXXXALGFL*NMNSRSPSCLSVTKASAVRACLS 400
GS + ++P*W T ALG *NMNSRSPS SVTKASAVRA S
Sbjct: 353 GSAIKLIDP*WKTAALLMTSTLSSSAVRSMSALGLR*NMNSRSPSARSVTKASAVRAPES 174
Query: 399 NRHPSEFTLFCFRMFTNMCPNSSSPNLPTKAEDPPSLAMAQATLAGAPPGALTK 238
P T RM +M PNSSSP+LPTKA PP A A ATLAGAPPGALTK
Sbjct: 173 KTTPPASTPLSRRMAASMRPNSSSPSLPTKAAPPPRRATAMATLAGAPPGALTK 12
>gb|BQ660955.1|BQ660955 HM01D23w HM Hordeum vulgare subsp. vulgare cDNA clone HM01D23
3-PRIME, mRNA sequence
Length = 637
Score = 250 bits (540), Expect(2) = 1e-069
Identities = 101/119 (84%), Positives = 113/119 (94%)
Frame = +2 / -1
Query: 758 LTRGDANDEKNVLSLWFDGLKLLVVTDGDKGCRYFTKDFKGSVPGFKVDTVDTTGAGDAF 937
LT+GDANDEKNVLSLWF+GLKLL+VTDG+KGCRYFTKDFKGSVPG+ V+TVDTTGAGDAF
Sbjct: 592 LTQGDANDEKNVLSLWFEGLKLLIVTDGEKGCRYFTKDFKGSVPGYSVNTVDTTGAGDAF 413
Query: 938 VGSLLVNVAKDDSIFHNEEKLREALKFSNACGAICTTKKGAIPALPTVATAQDLIAKAN 1114
VGSLLVNV+KDDSIF+NE KLRE L+FSNACGAICTTKKGAIPALPT ATA +LI+K +
Sbjct: 412 VGSLLVNVSKDDSIFYNEAKLREVLQFSNACGAICTTKKGAIPALPTTATALELISKGS 236
Score = 172 bits (370), Expect(2) = 2e-045
Identities = 85/120 (70%), Positives = 88/120 (73%)
Frame = -2 / +3
Query: 1113 LALAMRSWAVATVGSAGMAPFLVVQMAPQALENLRASRSFSSLWKMESSLATLTRREPTK 934
L L M S AVA VGSAGMAPFLVVQMAPQA EN S S +SL KMESSL TLTRREPTK
Sbjct: 237 LPLLMSSRAVAVVGSAGMAPFLVVQMAPQAFENCSTSLSLASL*KMESSLETLTRREPTK 416
Query: 933 ASPAPVVSTVSTLKPGTLPLKSLVKYLHXXXXXXXXXXXXXSNHRDSTFFSSLASPRVRK 754
ASPAPVVSTV T PGT PLKSLVKYLH SN R+STFFSSLASP VR+
Sbjct: 417 ASPAPVVSTVLTE*PGTEPLKSLVKYLHPFSPSVTMSSLRPSNQRESTFFSSLASPWVRE 596
Score = 34.5 bits (69), Expect(2) = 1e-069
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +2 / -3
Query: 716 EADFIKVSDDEVAF 757
EADFIKVSDDEVAF
Sbjct: 635 EADFIKVSDDEVAF 594
Score = 31.8 bits (63), Expect(2) = 2e-045
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = -1 / +3
Query: 769 PAREEGHLVVADLDEVGL 716
P EGHL+VA LDEVGL
Sbjct: 582 PWVREGHLIVAHLDEVGL 635
>gb|BU967748.1|BU967748 HB05E12r BC Hordeum vulgare subsp. vulgare cDNA clone HB05E12
5-PRIME, mRNA sequence
Length = 453
Score = 252 bits (545), Expect = 3e-066
Identities = 102/147 (69%), Positives = 120/147 (81%)
Frame = +2 / +3
Query: 299 GSSAFVGKFGDDEFGHMLVNILKQNNVNSEGCLFDKHARTALAFVTLKHDGEREFMFYRN 478
GS+AF+GK GDDEFG+ML ++LK+NNVN++G LFD HARTALAFVTL+ DGEREFMFYRN
Sbjct: 9 GSAAFIGKVGDDEFGYMLSDMLKENNVNNQGLLFDTHARTALAFVTLRSDGEREFMFYRN 188
Query: 479 PSADMLLTEAELDLGLVRRARVFHYGSISLISEPCRSXXXXXXXXXXXXGVLCSYDPNVR 658
PSADMLL E ELDL L+R+A++FH+GSISLI+EPCR+ GVL SYDPN+R
Sbjct: 189 PSADMLLEEKELDLDLIRKAKIFHHGSISLITEPCRTAHIAASKAAKNAGVLISYDPNLR 368
Query: 659 LPLWPSPDAAREGILSIWKEADFIKVS 739
LPLW S D AR+GILSIW AD IKVS
Sbjct: 369 LPLWTSADDARDGILSIWDTADLIKVS 449
Score = 126 bits (270), Expect = 3e-028
Identities = 67/148 (45%), Positives = 79/148 (53%)
Frame = -2 / -3
Query: 741 SLTLMKSASFQMLRMPSRAASGDGQSGRRTLGS*EQSTPXXXXXXXXXXXAERHGSEMSE 562
+LTL++SA MLR+PS A+S D SG GS E STP A HGS +
Sbjct: 451 ALTLIRSAVSHMLRIPSLASSADVHSGSLKFGSYEISTPAFLAALEAAICAVLHGSVIRL 272
Query: 561 MEP*WNTLXXXXXXXXXXXXXXXXXALGFL*NMNSRSPSCLSVTKASAVRACLSNRHPSE 382
++P*W ALG *NMNSRSPS SVT A AV A +SN +P
Sbjct: 271 IDP*WKIFAFLIRSRSSSFSSSSMSALGLR*NMNSRSPSLRSVTNAKAVLA*VSNSNP*L 92
Query: 381 FTLFCFRMFTNMCPNSSSPNLPTKAEDP 298
FTLF F M +M PNSSSP P KA +P
Sbjct: 91 FTLFSFSMSDSMYPNSSSPTFPMKAAEP 8
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 517,500,256
Number of Sequences: 312970
Number of extensions: 7136889
Number of successful extensions: 108332
Number of sequences better than 1.0e-020: 156
length of database: 58,378,179
effective HSP length: 53
effective length of database: 41,790,769
effective search space used: 19307335278
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)