TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QBD3a09.xg.3.1
(1105 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AL505985.1|AL505985 AL505985 Hordeum vulgare Barke devel... 403 e-112
gb|CA032672.1|CA032672 HX13N16r HX Hordeum vulgare subsp. v... 374 e-103
gb|BQ466322.1|BQ466322 HT02D09r HT Hordeum vulgare subsp. v... 370 e-102
gb|AV923623.1|AV923623 AV923623 K. Sato unpublished cDNA li... 360 7e-099
gb|AV928069.1|AV928069 AV928069 K. Sato unpublished cDNA li... 358 4e-098
gb|AV929739.1|AV929739 AV929739 K. Sato unpublished cDNA li... 325 4e-088
gb|BI950822.1|BI950822 HVSMEl0023F04f Hordeum vulgare spike... 248 3e-065
gb|AL500012.1|AL500012 AL500012 Hordeum vulgare Barke etiol... 210 1e-054
gb|CA012379.1|CA012379 HT05E07r HT Hordeum vulgare subsp. v... 191 7e-048
gb|AL450843.1|AL450843 AL450843 Hordeum vulgare Barke etiol... 138 6e-035
>gb|AL505985.1|AL505985 AL505985 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY01E03T 5',
mRNA sequence
Length = 700
Score = 403 bits (875), Expect = e-112
Identities = 172/211 (81%), Positives = 183/211 (86%)
Frame = +1 / +1
Query: 178 GRDASHDAAHALRVRDXXXXXXXXXXXXXPDRLLTVELAALLHDVGDYKYTKNNVEDMSV 357
GRDASHDAAHALRVRD PDRLL VELAALLHD+GDYKYTK+N EDMS+
Sbjct: 58 GRDASHDAAHALRVRDLALSLAXEQGVSSPDRLLIVELAALLHDIGDYKYTKDNAEDMSI 237
Query: 358 VEMFLQEVGLDEGQKDEIVAIIKGMGFKNEVSNKSIVEPTLEFAIVQDADRLDAIGAIGI 537
V+ FL EVGL+EGQK+EIVAII GMGFKNEVS K E TLEFAIVQDADRLDAIGAIG+
Sbjct: 238 VKRFLGEVGLEEGQKEEIVAIITGMGFKNEVSKKLNAETTLEFAIVQDADRLDAIGAIGV 417
Query: 538 ARCFTYGGSKNSALHDPRILPRDSLSKEKYMSKEEKQTSINHFHEKLFKLKDMMKTEAGK 717
ARCFTYGGSKNSALHDP +LPRD+LSKEKYMSKEEKQTSINHFHEKLFKLKDMMKTEAGK
Sbjct: 418 ARCFTYGGSKNSALHDPNVLPRDNLSKEKYMSKEEKQTSINHFHEKLFKLKDMMKTEAGK 597
Query: 718 RRAEKRHRFMEEFVAEFYEEWSGRA*G*TTR 810
+RAEKRH+FME FVAEFYEEWS A* * TR
Sbjct: 598 KRAEKRHKFMETFVAEFYEEWSXXA*S*PTR 690
Score = 301 bits (651), Expect = 6e-081
Identities = 135/229 (58%), Positives = 159/229 (69%)
Frame = -2 / -2
Query: 813 KPGCSTSSPATPLFVEFSHKFLHEPMPFLSSPFPGLCLHHVLQFKKLLMKMID*CXXXXX 634
+ G STSS TPLF+EFSHK LHE +PFL S FP LCLHHVLQ KKLLM+MI+*C
Sbjct: 693 RSGWSTSSXXTPLFIEFSHKSLHELVPFLCSLFPSLCLHHVLQLKKLLMEMIN*CLFLLL 514
Query: 633 XXXXXLRQAITWQNSRIM*CAVLATTICKTSCNTNCPNCIQAICILYNCKFKSGLNNRFI 454
L Q I + RIM C VLA +ICKTSCN N NCIQ ICIL++CK KSGL + +
Sbjct: 513 GHVLLL*QIIPRKYVRIMQCTVLAPSICKTSCNANRTNCIQTICILHDCKLKSGLCIKLL 334
Query: 453 *NFIFEPHPLNNCHYFILLAFIQSYLLKKHLNDAXXXXXXXXXXXISNVVQESGQFHGEE 274
*N IFE HP NN HYF+LL+ ++++L KK +DA I++VVQE QFH EE
Sbjct: 333 *NLIFESHPCNNGHYFLLLSLLETHLSKKPFDDAHILRIILGILVITDVVQECSQFHDEE 154
Query: 273 AVGSGEALFGCERERKVSDAERVRGVVGGIAPAHLPLHQLLRSPHRRRH 127
AV G+AL E ER+V DAE V GVVGG+APAHLPLH LL +PHRRRH
Sbjct: 153 AVRGGDALLXGEGEREVPDAECVSGVVGGVAPAHLPLH*LLGTPHRRRH 7
Score = 276 bits (597), Expect = 2e-073
Identities = 130/211 (61%), Positives = 146/211 (69%)
Frame = +2 / +2
Query: 176 AGAMPPTTPRTRSASETLRSRSQPKRASPLPTASSPWNWPLSCTTLEITSIPRTMWRI*A 355
AGA PPTTP T SAS T RS S RASP TASS WNW SCTT ITSIPR M RI*A
Sbjct: 56 AGATPPTTPLTHSASGTSRSPSPXSRASPPRTASSSWNWLHSCTTSVITSIPRIMRRI*A 235
Query: 356 SLRCFFKR*DWMKAKRMK*WQLLRGWGSKMKFQINXXXXXXXXXXXYKMQIAWMQLGQLV 535
S + F +R + +R K*W LL+GW SKM+FQ + KMQI WMQL +L
Sbjct: 236 SSKGFLERWVSRRDRRRK*WPLLQGWDSKMRFQRSLMQRPLLSLQSCKMQIVWMQLVRLA 415
Query: 536 LQDVLHMVVARTAHYMILEFCHVIACRRKSTCPRKRSRHQSIIFMRSFLN*RT**RQRPG 715
LQDVLHM ART H MIL + I C+R+STCPR+R++HQ II MRSFL+*RT**RQR G
Sbjct: 416 LQDVLHMEGARTVHCMILTYFRGIICQRRSTCPRRRNKHQLIISMRSFLS*RT**RQRLG 595
Query: 716 KGELRKGIGSWRNLWLNSTKSGVAGLEVEQP 808
K E RKG SWR LWLNS KSGV LEV+QP
Sbjct: 596 KREQRKGTSSWRLLWLNSMKSGVXXLEVDQP 688
Score = 258 bits (557), Expect = 5e-068
Identities = 122/169 (72%), Positives = 126/169 (74%)
Frame = -3 / -3
Query: 818 AQNLVVQPQALPLHXXXXXXXXXXXNLCLFSALLFPASVFIMXXXXXXXXXXXLIDVCFS 639
A LV Q QA LH NLCLFSAL FPASVFIM LIDVCFS
Sbjct: 698 AHGLVGQLQAXXLHSS*NSATKVSMNLCLFSALFFPASVFIMSFNLKSFSWK*LIDVCFS 519
Query: 638 SLDMYFSFDKLSRGRILGSCNALFLLPPYVKHLAIPIAPIASRRSASCTIANSRVGSTID 459
SLDMYFSFDKLSRG LGSCNALFLLPPYVKHLA PIAPIASRRSASCTIANSRV S +
Sbjct: 518 SLDMYFSFDKLSRGSTLGSCNALFLLPPYVKHLATPIAPIASRRSASCTIANSRVVSALS 339
Query: 458 LFETSFLNPIPLIIATISSFWPSSNPTS*RNISTTLISSTLFLVYL*SP 312
FETSFLNPIP+I+ATISSF PSS PTS RN+ T LISS L LVYL*SP
Sbjct: 338 FFETSFLNPIPVIMATISSFCPSSRPTSPRNLLTMLISSALSLVYL*SP 192
Score = 229 bits (495), Expect = 2e-059
Identities = 110/176 (62%), Positives = 123/176 (69%)
Frame = +3 / +3
Query: 288 TGRSPARRWRLQVYQEQCGGYERR*DVSSRGRIG*RPKG*NSGNY*GDGVQK*SFK*IYC 467
TG +PAR LQVYQ CGGYE R VS RG +G NSG+Y DG+QK* FK C
Sbjct: 168 TGCTPARHR*LQVYQG*CGGYEHRQKVSWRGGSRGGTEGGNSGHYYRDGIQK*GFKEA*C 347
Query: 468 *AHS*ICNCTRCRSPGCNWGNWYCKMFYIWW*QEQRIT*S*NSAT**LVEGKVHVQGREA 647
HS*+CN RCRS GCNW +W CKMFYIW QEQ I *S* ++ * V+G+VHVQG E
Sbjct: 348 RDHS*VCNRARCRSSGCNWCDWRCKMFYIWREQEQCIA*S*RTSAG*FVKGEVHVQGGET 527
Query: 648 DINQSFS*EAF*TEGHDEDRGREKES*EKA*VHGGICG*ILRRVEWQGLRLNNQVL 815
+IN SF *EAF* EGHDEDRG EKES EKA VHG CG*IL RVE GL+L NQ +
Sbjct: 528 NIN*SFP*EAF*VEGHDEDRGWEKESREKAQVHGDFCG*IL*RVEXXGLKLTNQTV 695
Score = 155 bits (334), Expect(2) = 2e-042
Identities = 74/127 (58%), Positives = 77/127 (60%)
Frame = -1 / -1
Query: 808 WLFNLKPCHSTLRRIQPQIPP*TYAXXXXXXXXXXXXXXXSV*KASHEND*LMSASLPWT 629
WL N KP HSTL RIQPQ P*T A S *KASH ND*LM S PWT
Sbjct: 688 WLVNFKPXHSTLHRIQPQKSP*TCAFSLLSFSQPLSSSCPST*KASHGND*LMFVSPPWT 509
Query: 628 CTFPSTSYHVAEF*DHVMRCSCYHHM*NILQYQLPQLHPGDLHLVQLQIQEWAQQ*IYLK 449
CT P T+Y *DH M CSC HM*NILQ Q QLHP DLHL +LQ QEW+ * LK
Sbjct: 508 CTSPLTNYPAEVR*DHAMHCSCSLHM*NILQRQSHQLHPDDLHLARLQTQEWSLH*ASLK 329
Query: 448 LHF*TPS 428
HF* PS
Sbjct: 328 PHF*IPS 308
Score = 37.7 bits (76), Expect(2) = 2e-042
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = -1 / -1
Query: 373 EETSQRRSYPPHCSWYTCN 317
+ET R SYPPH WYTCN
Sbjct: 253 QETF*RCSYPPHYPWYTCN 197
>gb|CA032672.1|CA032672 HX13N16r HX Hordeum vulgare subsp. vulgare cDNA clone HX13N16
5-PRIME, mRNA sequence
Length = 645
Score = 374 bits (812), Expect = e-103
Identities = 157/193 (81%), Positives = 168/193 (87%)
Frame = +1 / +1
Query: 178 GRDASHDAAHALRVRDXXXXXXXXXXXXXPDRLLTVELAALLHDVGDYKYTKNNVEDMSV 357
GRDASHDAAHALRVRD PDRLL VELAALLHD+GDYKYTK+N EDMS+
Sbjct: 67 GRDASHDAAHALRVRDLALSLAAEQGVSSPDRLLIVELAALLHDIGDYKYTKDNAEDMSI 246
Query: 358 VEMFLQEVGLDEGQKDEIVAIIKGMGFKNEVSNKSIVEPTLEFAIVQDADRLDAIGAIGI 537
V+ FL EVGL+EGQK+EIVAII GMGFKNEVS K E TLEFAIVQDADRLDAIGAIG+
Sbjct: 247 VKRFLGEVGLEEGQKEEIVAIITGMGFKNEVSKKLNAETTLEFAIVQDADRLDAIGAIGV 426
Query: 538 ARCFTYGGSKNSALHDPRILPRDSLSKEKYMSKEEKQTSINHFHEKLFKLKDMMKTEAGK 717
ARCFTYGGSKNSALHDP +LPRD+LSKEKYMSKEEKQTSINHFHEKLFKLKDMMKTEAGK
Sbjct: 427 ARCFTYGGSKNSALHDPNVLPRDNLSKEKYMSKEEKQTSINHFHEKLFKLKDMMKTEAGK 606
Query: 718 RRAEKRHRFMEEF 756
+RAEKRH+FME F
Sbjct: 607 KRAEKRHKFMETF 645
Score = 278 bits (602), Expect = 3e-074
Identities = 125/214 (58%), Positives = 148/214 (69%)
Frame = -2 / -1
Query: 756 KFLHEPMPFLSSPFPGLCLHHVLQFKKLLMKMID*CXXXXXXXXXXLRQAITWQNSRIM* 577
K LHE +PFL S FP LCLHHVLQ KKLLM+MI+*C L Q I + RIM
Sbjct: 645 KSLHELVPFLCSLFPSLCLHHVLQLKKLLMEMIN*CLFLLLGHVLLL*QIIPRKYVRIMQ 466
Query: 576 CAVLATTICKTSCNTNCPNCIQAICILYNCKFKSGLNNRFI*NFIFEPHPLNNCHYFILL 397
C VLA +ICKTSCN N NCIQ ICIL++CK KSGL + +*N IFE HP NN HYF+LL
Sbjct: 465 CTVLAPSICKTSCNANRTNCIQTICILHDCKLKSGLCIKLL*NLIFESHPCNNGHYFLLL 286
Query: 396 AFIQSYLLKKHLNDAXXXXXXXXXXXISNVVQESGQFHGEEAVGSGEALFGCERERKVSD 217
+ ++++L KK +DA I++VVQE QFH EEAV G+AL G E ER+V D
Sbjct: 285 SLLETHLSKKPFDDAHILRIILGILVITDVVQECSQFHDEEAVRGGDALLGGEGEREVPD 106
Query: 216 AERVRGVVGGIAPAHLPLHQLLRSPHRRRHFDLR 115
AE V GVVGG+APAHLPLH LL +PHRRRHF +R
Sbjct: 105 AECVSGVVGGVAPAHLPLH*LLGTPHRRRHFSVR 4
Score = 248 bits (537), Expect = 3e-065
Identities = 113/143 (79%), Positives = 117/143 (81%)
Frame = -3 / -2
Query: 740 LCLFSALLFPASVFIMXXXXXXXXXXXLIDVCFSSLDMYFSFDKLSRGRILGSCNALFLL 561
LCLFSAL FPASVFIM LIDVCFSSLDMYFSFDKLSRG LGSCNALFLL
Sbjct: 629 LCLFSALFFPASVFIMSFNLKSFSWK*LIDVCFSSLDMYFSFDKLSRGSTLGSCNALFLL 450
Query: 560 PPYVKHLAIPIAPIASRRSASCTIANSRVGSTIDLFETSFLNPIPLIIATISSFWPSSNP 381
PPYVKHLA PIAPIASRRSASCTIANSRV S + FETSFLNPIP+I+ATISSF PSS P
Sbjct: 449 PPYVKHLATPIAPIASRRSASCTIANSRVVSALSFFETSFLNPIPVIMATISSFCPSSRP 270
Query: 380 TS*RNISTTLISSTLFLVYL*SP 312
TS RN+ T LISS L LVYL*SP
Sbjct: 269 TSPRNLLTMLISSALSLVYL*SP 201
Score = 248 bits (536), Expect = 4e-065
Identities = 117/192 (60%), Positives = 132/192 (68%)
Frame = +2 / +2
Query: 176 AGAMPPTTPRTRSASETLRSRSQPKRASPLPTASSPWNWPLSCTTLEITSIPRTMWRI*A 355
AGA PPTTP T SAS T RS S P RASP TASS WNW SCTT ITSIPR M RI*A
Sbjct: 65 AGATPPTTPLTHSASGTSRSPSPPSRASPPRTASSSWNWLHSCTTSVITSIPRIMRRI*A 244
Query: 356 SLRCFFKR*DWMKAKRMK*WQLLRGWGSKMKFQINXXXXXXXXXXXYKMQIAWMQLGQLV 535
S + F +R + +R K*W LL+GW SKM+FQ + KMQI WMQL +L
Sbjct: 245 SSKGFLERWVSRRDRRRK*WPLLQGWDSKMRFQRSLMQRPLLSLQSCKMQIVWMQLVRLA 424
Query: 536 LQDVLHMVVARTAHYMILEFCHVIACRRKSTCPRKRSRHQSIIFMRSFLN*RT**RQRPG 715
LQDVLHM ART H MIL + I C+R+STCPR+R++HQ II MRSFL+*RT**RQR G
Sbjct: 425 LQDVLHMEGARTVHCMILTYFRGIICQRRSTCPRRRNKHQLIISMRSFLS*RT**RQRLG 604
Query: 716 KGELRKGIGSWR 751
K E RKG SWR
Sbjct: 605 KREQRKGTSSWR 640
Score = 203 bits (437), Expect = 2e-051
Identities = 97/154 (62%), Positives = 108/154 (70%)
Frame = +3 / +3
Query: 288 TGRSPARRWRLQVYQEQCGGYERR*DVSSRGRIG*RPKG*NSGNY*GDGVQK*SFK*IYC 467
TG +PAR LQVYQ CGGYE R VS RG +G NSG+Y DG+QK* FK C
Sbjct: 177 TGCTPARHR*LQVYQG*CGGYEHRQKVSWRGGSRGGTEGGNSGHYYRDGIQK*GFKEA*C 356
Query: 468 *AHS*ICNCTRCRSPGCNWGNWYCKMFYIWW*QEQRIT*S*NSAT**LVEGKVHVQGREA 647
HS*+CN RCRS GCNW +W CKMFYIW QEQ I *S* ++ * V+G+VHVQG E
Sbjct: 357 RDHS*VCNRARCRSSGCNWCDWRCKMFYIWREQEQCIA*S*RTSAG*FVKGEVHVQGGET 536
Query: 648 DINQSFS*EAF*TEGHDEDRGREKES*EKA*VHG 749
+IN SF *EAF* EGHDEDRG EKES EKA VHG
Sbjct: 537 NIN*SFP*EAF*VEGHDEDRGWEKESREKAQVHG 638
Score = 122 bits (261), Expect(2) = 1e-032
Identities = 60/107 (56%), Positives = 63/107 (58%)
Frame = -1 / -3
Query: 748 P*TYAXXXXXXXXXXXXXXXSV*KASHEND*LMSASLPWTCTFPSTSYHVAEF*DHVMRC 569
P*T A S *KASH ND*LM S PWTCT P T+Y *DH M C
Sbjct: 637 P*TCAFSLLSFSQPLSSSCPST*KASHGND*LMFVSPPWTCTSPLTNYPAEVR*DHAMHC 458
Query: 568 SCYHHM*NILQYQLPQLHPGDLHLVQLQIQEWAQQ*IYLKLHF*TPS 428
SC HM*NILQ Q QLHP DLHL +LQ QEW+ * LK HF* PS
Sbjct: 457 SCSLHM*NILQRQSHQLHPDDLHLARLQTQEWSLH*ASLKPHF*IPS 317
Score = 37.7 bits (76), Expect(2) = 1e-032
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = -1 / -3
Query: 373 EETSQRRSYPPHCSWYTCN 317
+ET R SYPPH WYTCN
Sbjct: 262 QETF*RCSYPPHYPWYTCN 206
>gb|BQ466322.1|BQ466322 HT02D09r HT Hordeum vulgare subsp. vulgare cDNA clone HT02D09
5-PRIME, mRNA sequence
Length = 613
Score = 370 bits (802), Expect = e-102
Identities = 155/190 (81%), Positives = 166/190 (87%)
Frame = +1 / +1
Query: 178 GRDASHDAAHALRVRDXXXXXXXXXXXXXPDRLLTVELAALLHDVGDYKYTKNNVEDMSV 357
GRDASHDAAHALRVRD PDRLL VELAALLHD+GDYKYTK+N EDMS+
Sbjct: 43 GRDASHDAAHALRVRDLALSLAAEQGVSSPDRLLIVELAALLHDIGDYKYTKDNAEDMSI 222
Query: 358 VEMFLQEVGLDEGQKDEIVAIIKGMGFKNEVSNKSIVEPTLEFAIVQDADRLDAIGAIGI 537
V+ FL EVGL+EGQK+EIVAII GMGFKNEVS K E TLEFAIVQDADRLDAIGAIG+
Sbjct: 223 VKRFLGEVGLEEGQKEEIVAIITGMGFKNEVSKKLNAETTLEFAIVQDADRLDAIGAIGV 402
Query: 538 ARCFTYGGSKNSALHDPRILPRDSLSKEKYMSKEEKQTSINHFHEKLFKLKDMMKTEAGK 717
ARCFTYGGSKNSALHDP +LPRD+LSKEKYMSKEEKQTSINHFHEKLFKLKDMMKTEAGK
Sbjct: 403 ARCFTYGGSKNSALHDPNVLPRDNLSKEKYMSKEEKQTSINHFHEKLFKLKDMMKTEAGK 582
Query: 718 RRAEKRHRFM 747
+RAEKRH+FM
Sbjct: 583 KRAEKRHKFM 612
Score = 253 bits (546), Expect = 2e-066
Identities = 115/199 (57%), Positives = 136/199 (68%)
Frame = -2 / -2
Query: 747 HEPMPFLSSPFPGLCLHHVLQFKKLLMKMID*CXXXXXXXXXXLRQAITWQNSRIM*CAV 568
HE +PFL S FP LCLHHVLQ KKLLM+MI+*C L Q I + RIM C V
Sbjct: 612 HELVPFLCSLFPSLCLHHVLQLKKLLMEMIN*CLFLLLGHVLLL*QIIPRKYVRIMQCTV 433
Query: 567 LATTICKTSCNTNCPNCIQAICILYNCKFKSGLNNRFI*NFIFEPHPLNNCHYFILLAFI 388
LA +ICKTSCN N NCIQ ICIL++CK KSGL + +*N IFE HP NN HYF+LL+ +
Sbjct: 432 LAPSICKTSCNANRTNCIQTICILHDCKLKSGLCIKLL*NLIFESHPCNNGHYFLLLSLL 253
Query: 387 QSYLLKKHLNDAXXXXXXXXXXXISNVVQESGQFHGEEAVGSGEALFGCERERKVSDAER 208
+++L KK +DA I++VVQE QFH EEAV G+AL G E ER+V DAE
Sbjct: 252 ETHLSKKPFDDAHILRIILGILVITDVVQECSQFHDEEAVRGGDALLGGEGEREVPDAEC 73
Query: 207 VRGVVGGIAPAHLPLHQLL 151
V GVVGG+APAHLPLH LL
Sbjct: 72 VSGVVGGVAPAHLPLH*LL 16
Score = 248 bits (537), Expect = 3e-065
Identities = 113/143 (79%), Positives = 117/143 (81%)
Frame = -3 / -3
Query: 740 LCLFSALLFPASVFIMXXXXXXXXXXXLIDVCFSSLDMYFSFDKLSRGRILGSCNALFLL 561
LCLFSAL FPASVFIM LIDVCFSSLDMYFSFDKLSRG LGSCNALFLL
Sbjct: 605 LCLFSALFFPASVFIMSFNLKSFSWK*LIDVCFSSLDMYFSFDKLSRGSTLGSCNALFLL 426
Query: 560 PPYVKHLAIPIAPIASRRSASCTIANSRVGSTIDLFETSFLNPIPLIIATISSFWPSSNP 381
PPYVKHLA PIAPIASRRSASCTIANSRV S + FETSFLNPIP+I+ATISSF PSS P
Sbjct: 425 PPYVKHLATPIAPIASRRSASCTIANSRVVSALSFFETSFLNPIPVIMATISSFCPSSRP 246
Query: 380 TS*RNISTTLISSTLFLVYL*SP 312
TS RN+ T LISS L LVYL*SP
Sbjct: 245 TSPRNLLTMLISSALSLVYL*SP 177
Score = 246 bits (531), Expect = 2e-064
Identities = 116/191 (60%), Positives = 131/191 (68%)
Frame = +2 / +2
Query: 176 AGAMPPTTPRTRSASETLRSRSQPKRASPLPTASSPWNWPLSCTTLEITSIPRTMWRI*A 355
AGA PPTTP T SAS T RS S P RASP TASS WNW SCTT ITSIPR M RI*A
Sbjct: 41 AGATPPTTPLTHSASGTSRSPSPPSRASPPRTASSSWNWLHSCTTSVITSIPRIMRRI*A 220
Query: 356 SLRCFFKR*DWMKAKRMK*WQLLRGWGSKMKFQINXXXXXXXXXXXYKMQIAWMQLGQLV 535
S + F +R + +R K*W LL+GW SKM+FQ + KMQI WMQL +L
Sbjct: 221 SSKGFLERWVSRRDRRRK*WPLLQGWDSKMRFQRSLMQRPLLSLQSCKMQIVWMQLVRLA 400
Query: 536 LQDVLHMVVARTAHYMILEFCHVIACRRKSTCPRKRSRHQSIIFMRSFLN*RT**RQRPG 715
LQDVLHM ART H MIL + I C+R+STCPR+R++HQ II MRSFL+*RT**RQR G
Sbjct: 401 LQDVLHMEGARTVHCMILTYFRGIICQRRSTCPRRRNKHQLIISMRSFLS*RT**RQRLG 580
Query: 716 KGELRKGIGSW 748
K E RKG SW
Sbjct: 581 KREQRKGTSSW 613
Score = 200 bits (431), Expect = 1e-050
Identities = 96/153 (62%), Positives = 107/153 (69%)
Frame = +3 / +3
Query: 288 TGRSPARRWRLQVYQEQCGGYERR*DVSSRGRIG*RPKG*NSGNY*GDGVQK*SFK*IYC 467
TG +PAR LQVYQ CGGYE R VS RG +G NSG+Y DG+QK* FK C
Sbjct: 153 TGCTPARHR*LQVYQG*CGGYEHRQKVSWRGGSRGGTEGGNSGHYYRDGIQK*GFKEA*C 332
Query: 468 *AHS*ICNCTRCRSPGCNWGNWYCKMFYIWW*QEQRIT*S*NSAT**LVEGKVHVQGREA 647
HS*+CN RCRS GCNW +W CKMFYIW QEQ I *S* ++ * V+G+VHVQG E
Sbjct: 333 RDHS*VCNRARCRSSGCNWCDWRCKMFYIWREQEQCIA*S*RTSAG*FVKGEVHVQGGET 512
Query: 648 DINQSFS*EAF*TEGHDEDRGREKES*EKA*VH 746
+IN SF *EAF* EGHDEDRG EKES EKA VH
Sbjct: 513 NIN*SFP*EAF*VEGHDEDRGWEKESREKAQVH 611
Score = 122 bits (261), Expect(2) = 1e-032
Identities = 60/107 (56%), Positives = 63/107 (58%)
Frame = -1 / -1
Query: 748 P*TYAXXXXXXXXXXXXXXXSV*KASHEND*LMSASLPWTCTFPSTSYHVAEF*DHVMRC 569
P*T A S *KASH ND*LM S PWTCT P T+Y *DH M C
Sbjct: 613 P*TCAFSLLSFSQPLSSSCPST*KASHGND*LMFVSPPWTCTSPLTNYPAEVR*DHAMHC 434
Query: 568 SCYHHM*NILQYQLPQLHPGDLHLVQLQIQEWAQQ*IYLKLHF*TPS 428
SC HM*NILQ Q QLHP DLHL +LQ QEW+ * LK HF* PS
Sbjct: 433 SCSLHM*NILQRQSHQLHPDDLHLARLQTQEWSLH*ASLKPHF*IPS 293
Score = 37.7 bits (76), Expect(2) = 1e-032
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = -1 / -1
Query: 373 EETSQRRSYPPHCSWYTCN 317
+ET R SYPPH WYTCN
Sbjct: 238 QETF*RCSYPPHYPWYTCN 182
>gb|AV923623.1|AV923623 AV923623 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd13m20 5', mRNA sequence
Length = 668
Score = 360 bits (781), Expect = 7e-099
Identities = 152/186 (81%), Positives = 162/186 (87%)
Frame = +1 / +2
Query: 178 GRDASHDAAHALRVRDXXXXXXXXXXXXXPDRLLTVELAALLHDVGDYKYTKNNVEDMSV 357
GRDASHDAAHALRVRD PDRLL VELAALLHD+GDYKYTK+N EDMS+
Sbjct: 110 GRDASHDAAHALRVRDLALSLAAEQGVSSPDRLLIVELAALLHDIGDYKYTKDNAEDMSI 289
Query: 358 VEMFLQEVGLDEGQKDEIVAIIKGMGFKNEVSNKSIVEPTLEFAIVQDADRLDAIGAIGI 537
V+ FL EVGL+EGQK+EIVAII GMGFKNEVS K E TLEFAIVQDADRLDAIGAIG+
Sbjct: 290 VKRFLGEVGLEEGQKEEIVAIITGMGFKNEVSKKLNAETTLEFAIVQDADRLDAIGAIGV 469
Query: 538 ARCFTYGGSKNSALHDPRILPRDSLSKEKYMSKEEKQTSINHFHEKLFKLKDMMKTEAGK 717
ARCFTYGGSKNSALHDP +LPRD+LSKEKYMSKEEKQTSINHFHEKLFKLKDMMKTEAGK
Sbjct: 470 ARCFTYGGSKNSALHDPNVLPRDNLSKEKYMSKEEKQTSINHFHEKLFKLKDMMKTEAGK 649
Query: 718 RRAEKR 735
+RAEKR
Sbjct: 650 KRAEKR 667
Score = 267 bits (578), Expect = 7e-071
Identities = 120/204 (58%), Positives = 141/204 (69%)
Frame = -2 / -2
Query: 735 PFLSSPFPGLCLHHVLQFKKLLMKMID*CXXXXXXXXXXLRQAITWQNSRIM*CAVLATT 556
PFL S FP LCLHHVLQ KKLLM+MI+*C L Q I + RIM C VLA +
Sbjct: 667 PFLCSLFPSLCLHHVLQLKKLLMEMIN*CLFLLLGHVLLL*QIIPRKYVRIMQCTVLAPS 488
Query: 555 ICKTSCNTNCPNCIQAICILYNCKFKSGLNNRFI*NFIFEPHPLNNCHYFILLAFIQSYL 376
ICKTSCN N NCIQ ICIL++CK KSGL + +*N IFE HP NN HYF+LL+ ++++L
Sbjct: 487 ICKTSCNANRTNCIQTICILHDCKLKSGLCIKLL*NLIFESHPCNNGHYFLLLSLLETHL 308
Query: 375 LKKHLNDAXXXXXXXXXXXISNVVQESGQFHGEEAVGSGEALFGCERERKVSDAERVRGV 196
KK +DA I++VVQE QFH EEAV G+AL G E ER+V DAE V GV
Sbjct: 307 SKKPFDDAHILRIILGILVITDVVQECSQFHDEEAVRGGDALLGGEGEREVPDAECVSGV 128
Query: 195 VGGIAPAHLPLHQLLRSPHRRRHF 124
VGG+APAHLPLH LL +PHRRRHF
Sbjct: 127 VGGVAPAHLPLH*LLGTPHRRRHF 56
Score = 243 bits (524), Expect = 2e-063
Identities = 111/141 (78%), Positives = 115/141 (81%)
Frame = -3 / -3
Query: 734 LFSALLFPASVFIMXXXXXXXXXXXLIDVCFSSLDMYFSFDKLSRGRILGSCNALFLLPP 555
LFSAL FPASVFIM LIDVCFSSLDMYFSFDKLSRG LGSCNALFLLPP
Sbjct: 666 LFSALFFPASVFIMSFNLKSFSWK*LIDVCFSSLDMYFSFDKLSRGSTLGSCNALFLLPP 487
Query: 554 YVKHLAIPIAPIASRRSASCTIANSRVGSTIDLFETSFLNPIPLIIATISSFWPSSNPTS 375
YVKHLA PIAPIASRRSASCTIANSRV S + FETSFLNPIP+I+ATISSF PSS PTS
Sbjct: 486 YVKHLATPIAPIASRRSASCTIANSRVVSALSFFETSFLNPIPVIMATISSFCPSSRPTS 307
Query: 374 *RNISTTLISSTLFLVYL*SP 312
RN+ T LISS L LVYL*SP
Sbjct: 306 PRNLLTMLISSALSLVYL*SP 244
Score = 239 bits (517), Expect = 2e-062
Identities = 114/187 (60%), Positives = 129/187 (68%)
Frame = +2 / +3
Query: 176 AGAMPPTTPRTRSASETLRSRSQPKRASPLPTASSPWNWPLSCTTLEITSIPRTMWRI*A 355
AGA PPTTP T SAS T RS S P RASP TASS WNW SCTT ITSIPR M RI*A
Sbjct: 108 AGATPPTTPLTHSASGTSRSPSPPSRASPPRTASSSWNWLHSCTTSVITSIPRIMRRI*A 287
Query: 356 SLRCFFKR*DWMKAKRMK*WQLLRGWGSKMKFQINXXXXXXXXXXXYKMQIAWMQLGQLV 535
S + F +R + +R K*W LL+GW SKM+FQ + KMQI WMQL +L
Sbjct: 288 SSKGFLERWVSRRDRRRK*WPLLQGWDSKMRFQRSLMQRPLLSLQSCKMQIVWMQLVRLA 467
Query: 536 LQDVLHMVVARTAHYMILEFCHVIACRRKSTCPRKRSRHQSIIFMRSFLN*RT**RQRPG 715
LQDVLHM ART H MIL + I C+R+STCPR+R++HQ II MRSFL+*RT**RQR G
Sbjct: 468 LQDVLHMEGARTVHCMILTYFRGIICQRRSTCPRRRNKHQLIISMRSFLS*RT**RQRLG 647
Query: 716 KGELRKG 736
K E RKG
Sbjct: 648 KREQRKG 668
Score = 194 bits (419), Expect = 6e-049
Identities = 93/149 (62%), Positives = 104/149 (69%)
Frame = +3 / +1
Query: 288 TGRSPARRWRLQVYQEQCGGYERR*DVSSRGRIG*RPKG*NSGNY*GDGVQK*SFK*IYC 467
TG +PAR LQVYQ CGGYE R VS RG +G NSG+Y DG+QK* FK C
Sbjct: 220 TGCTPARHR*LQVYQG*CGGYEHRQKVSWRGGSRGGTEGGNSGHYYRDGIQK*GFKEA*C 399
Query: 468 *AHS*ICNCTRCRSPGCNWGNWYCKMFYIWW*QEQRIT*S*NSAT**LVEGKVHVQGREA 647
HS*+CN RCRS GCNW +W CKMFYIW QEQ I *S* ++ * V+G+VHVQG E
Sbjct: 400 RDHS*VCNRARCRSSGCNWCDWRCKMFYIWREQEQCIA*S*RTSAG*FVKGEVHVQGGET 579
Query: 648 DINQSFS*EAF*TEGHDEDRGREKES*EK 734
+IN SF *EAF* EGHDEDRG EKES EK
Sbjct: 580 NIN*SFP*EAF*VEGHDEDRGWEKESREK 666
Score = 121 bits (258), Expect(2) = 4e-032
Identities = 55/85 (64%), Positives = 58/85 (68%)
Frame = -1 / -1
Query: 682 *KASHEND*LMSASLPWTCTFPSTSYHVAEF*DHVMRCSCYHHM*NILQYQLPQLHPGDL 503
*KASH ND*LM S PWTCT P T+Y *DH M CSC HM*NILQ Q QLHP DL
Sbjct: 614 *KASHGND*LMFVSPPWTCTSPLTNYPAEVR*DHAMHCSCSLHM*NILQRQSHQLHPDDL 435
Query: 502 HLVQLQIQEWAQQ*IYLKLHF*TPS 428
HL +LQ QEW+ * LK HF* PS
Sbjct: 434 HLARLQTQEWSLH*ASLKPHF*IPS 360
Score = 37.7 bits (76), Expect(2) = 4e-032
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = -1 / -1
Query: 373 EETSQRRSYPPHCSWYTCN 317
+ET R SYPPH WYTCN
Sbjct: 305 QETF*RCSYPPHYPWYTCN 249
>gb|AV928069.1|AV928069 AV928069 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd13m20 3', mRNA sequence
Length = 667
Score = 358 bits (775), Expect = 4e-098
Identities = 149/173 (86%), Positives = 160/173 (92%)
Frame = +1 / -2
Query: 292 AALLHDVGDYKYTKNNVEDMSVVEMFLQEVGLDEGQKDEIVAIIKGMGFKNEVSNKSIVE 471
AALLHD+GDYKYTK+N EDMS+V+ FL EVGL+EGQK+EIVAII GMGFKNEVS K E
Sbjct: 666 AALLHDIGDYKYTKDNAEDMSIVKRFLGEVGLEEGQKEEIVAIITGMGFKNEVSKKLNAE 487
Query: 472 PTLEFAIVQDADRLDAIGAIGIARCFTYGGSKNSALHDPRILPRDSLSKEKYMSKEEKQT 651
TLEFAIVQDADRLDAIGAIG+ARCFTYGGSKNSALHDP +LPRD+LSKEKYMSKEEKQT
Sbjct: 486 TTLEFAIVQDADRLDAIGAIGVARCFTYGGSKNSALHDPNVLPRDNLSKEKYMSKEEKQT 307
Query: 652 SINHFHEKLFKLKDMMKTEAGKRRAEKRHRFMEEFVAEFYEEWSGRA*G*TTR 810
SINHFHEKLFKLKDMMKTEAGK+RAEKRH+FME FVAEFYEEWSGRA* * TR
Sbjct: 306 SINHFHEKLFKLKDMMKTEAGKKRAEKRHKFMETFVAEFYEEWSGRA*S*PTR 148
Score = 264 bits (571), Expect = 6e-070
Identities = 124/169 (73%), Positives = 128/169 (75%)
Frame = -3 / +2
Query: 818 AQNLVVQPQALPLHXXXXXXXXXXXNLCLFSALLFPASVFIMXXXXXXXXXXXLIDVCFS 639
A LV Q QALPLH NLCLFSAL FPASVFIM LIDVCFS
Sbjct: 140 AHGLVGQLQALPLHSS*NSATKVSMNLCLFSALFFPASVFIMSFNLKSFSWK*LIDVCFS 319
Query: 638 SLDMYFSFDKLSRGRILGSCNALFLLPPYVKHLAIPIAPIASRRSASCTIANSRVGSTID 459
SLDMYFSFDKLSRG LGSCNALFLLPPYVKHLA PIAPIASRRSASCTIANSRV S +
Sbjct: 320 SLDMYFSFDKLSRGSTLGSCNALFLLPPYVKHLATPIAPIASRRSASCTIANSRVVSALS 499
Query: 458 LFETSFLNPIPLIIATISSFWPSSNPTS*RNISTTLISSTLFLVYL*SP 312
FETSFLNPIP+I+ATISSF PSS PTS RN+ T LISS L LVYL*SP
Sbjct: 500 FFETSFLNPIPVIMATISSFCPSSRPTSPRNLLTMLISSALSLVYL*SP 646
Score = 237 bits (513), Expect = 6e-062
Identities = 112/177 (63%), Positives = 125/177 (70%)
Frame = +3 / -1
Query: 291 GRSPARRWRLQVYQEQCGGYERR*DVSSRGRIG*RPKG*NSGNY*GDGVQK*SFK*IYC* 470
G +PAR LQVYQ CGGYE R VS RG +G NSG+Y DG+QK* FK C
Sbjct: 667 GCTPARHR*LQVYQG*CGGYEHRQKVSWRGGSRGGTEGGNSGHYYRDGIQK*GFKEA*CR 488
Query: 471 AHS*ICNCTRCRSPGCNWGNWYCKMFYIWW*QEQRIT*S*NSAT**LVEGKVHVQGREAD 650
HS*+CN RCRS GCNW +W CKMFYIW QEQ I *S* ++ * V+G+VHVQG E +
Sbjct: 487 DHS*VCNRARCRSSGCNWCDWRCKMFYIWREQEQCIA*S*RTSAG*FVKGEVHVQGGETN 308
Query: 651 INQSFS*EAF*TEGHDEDRGREKES*EKA*VHGGICG*ILRRVEWQGLRLNNQVLSL 821
IN SF *EAF* EGHDEDRG EKES EKA VHG CG*IL RVEWQGL+L NQ + L
Sbjct: 307 IN*SFP*EAF*VEGHDEDRGWEKESREKAQVHGDFCG*IL*RVEWQGLKLTNQTVGL 137
Score = 226 bits (487), Expect = 2e-058
Identities = 105/170 (61%), Positives = 121/170 (71%)
Frame = +2 / -3
Query: 299 SCTTLEITSIPRTMWRI*ASLRCFFKR*DWMKAKRMK*WQLLRGWGSKMKFQINXXXXXX 478
SCTT ITSIPR M RI*AS + F +R + +R K*W LL+GW SKM+FQ +
Sbjct: 659 SCTTSVITSIPRIMRRI*ASSKGFLERWVSRRDRRRK*WPLLQGWDSKMRFQRSLMQRPL 480
Query: 479 XXXXXYKMQIAWMQLGQLVLQDVLHMVVARTAHYMILEFCHVIACRRKSTCPRKRSRHQS 658
KMQI WMQL +L LQDVLHM ART H MIL + I C+R+STCPR+R++HQ
Sbjct: 479 LSLQSCKMQIVWMQLVRLALQDVLHMEGARTVHCMILTYFRGIICQRRSTCPRRRNKHQL 300
Query: 659 IIFMRSFLN*RT**RQRPGKGELRKGIGSWRNLWLNSTKSGVAGLEVEQP 808
II MRSFL+*RT**RQR GK E RKG SWR LWLNS KSGVAGLEV+QP
Sbjct: 299 IISMRSFLS*RT**RQRLGKREQRKGTSSWRLLWLNSMKSGVAGLEVDQP 150
Score = 218 bits (471), Expect = 4e-056
Identities = 98/172 (56%), Positives = 118/172 (68%)
Frame = -2 / +1
Query: 813 KPGCSTSSPATPLFVEFSHKFLHEPMPFLSSPFPGLCLHHVLQFKKLLMKMID*CXXXXX 634
+ G STSSPATPLF+EFSHK LHE +PFL S FP LCLHHVLQ KKLLM+MI+*C
Sbjct: 145 RSGWSTSSPATPLFIEFSHKSLHELVPFLCSLFPSLCLHHVLQLKKLLMEMIN*CLFLLL 324
Query: 633 XXXXXLRQAITWQNSRIM*CAVLATTICKTSCNTNCPNCIQAICILYNCKFKSGLNNRFI 454
L Q I + RIM C VLA +ICKTSCN N NCIQ ICIL++CK KSGL + +
Sbjct: 325 GHVLLL*QIIPRKYVRIMQCTVLAPSICKTSCNANRTNCIQTICILHDCKLKSGLCIKLL 504
Query: 453 *NFIFEPHPLNNCHYFILLAFIQSYLLKKHLNDAXXXXXXXXXXXISNVVQE 298
*N IFE HP NN HYF+LL+ ++++L KK +DA I++VVQE
Sbjct: 505 *NLIFESHPCNNGHYFLLLSLLETHLSKKPFDDAHILRIILGILVITDVVQE 660
Score = 160 bits (345), Expect(2) = 5e-044
Identities = 75/127 (59%), Positives = 78/127 (61%)
Frame = -1 / +3
Query: 808 WLFNLKPCHSTLRRIQPQIPP*TYAXXXXXXXXXXXXXXXSV*KASHEND*LMSASLPWT 629
WL N KPCHSTL RIQPQ P*T A S *KASH ND*LM S PWT
Sbjct: 150 WLVNFKPCHSTLHRIQPQKSP*TCAFSLLSFSQPLSSSCPST*KASHGND*LMFVSPPWT 329
Query: 628 CTFPSTSYHVAEF*DHVMRCSCYHHM*NILQYQLPQLHPGDLHLVQLQIQEWAQQ*IYLK 449
CT P T+Y *DH M CSC HM*NILQ Q QLHP DLHL +LQ QEW+ * LK
Sbjct: 330 CTSPLTNYPAEVR*DHAMHCSCSLHM*NILQRQSHQLHPDDLHLARLQTQEWSLH*ASLK 509
Query: 448 LHF*TPS 428
HF* PS
Sbjct: 510 PHF*IPS 530
Score = 37.7 bits (76), Expect(2) = 5e-044
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = -1 / +3
Query: 373 EETSQRRSYPPHCSWYTCN 317
+ET R SYPPH WYTCN
Sbjct: 585 QETF*RCSYPPHYPWYTCN 641
>gb|AV929739.1|AV929739 AV929739 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd16g03 3', mRNA sequence
Length = 637
Score = 325 bits (703), Expect = 4e-088
Identities = 136/160 (85%), Positives = 147/160 (91%)
Frame = +1 / -2
Query: 331 KNNVEDMSVVEMFLQEVGLDEGQKDEIVAIIKGMGFKNEVSNKSIVEPTLEFAIVQDADR 510
++N EDMS+V+ FL EVGL+EGQK+EIVAII GMGFKNEVS K E TLEFAIVQDADR
Sbjct: 609 RDNAEDMSIVKRFLGEVGLEEGQKEEIVAIITGMGFKNEVSKKLNAETTLEFAIVQDADR 430
Query: 511 LDAIGAIGIARCFTYGGSKNSALHDPRILPRDSLSKEKYMSKEEKQTSINHFHEKLFKLK 690
LDAIGAIG+ARCFTYGGSKNSALHDP +LPRD+LSKEKYMSKEEKQTSINHFHEKLFKLK
Sbjct: 429 LDAIGAIGVARCFTYGGSKNSALHDPNVLPRDNLSKEKYMSKEEKQTSINHFHEKLFKLK 250
Query: 691 DMMKTEAGKRRAEKRHRFMEEFVAEFYEEWSGRA*G*TTR 810
DMMKTEAGK+RAEKRH+FME FVAEFYEEWSGRA* * TR
Sbjct: 249 DMMKTEAGKKRAEKRHKFMETFVAEFYEEWSGRA*S*PTR 130
Score = 252 bits (544), Expect = 3e-066
Identities = 118/163 (72%), Positives = 122/163 (74%)
Frame = -3 / +2
Query: 818 AQNLVVQPQALPLHXXXXXXXXXXXNLCLFSALLFPASVFIMXXXXXXXXXXXLIDVCFS 639
A LV Q QALPLH NLCLFSAL FPASVFIM LIDVCFS
Sbjct: 122 AHGLVGQLQALPLHSS*NSATKVSMNLCLFSALFFPASVFIMSFNLKSFSWK*LIDVCFS 301
Query: 638 SLDMYFSFDKLSRGRILGSCNALFLLPPYVKHLAIPIAPIASRRSASCTIANSRVGSTID 459
SLDMYFSFDKLSRG LGSCNALFLLPPYVKHLA PIAPIASRRSASCTIANSRV S +
Sbjct: 302 SLDMYFSFDKLSRGSTLGSCNALFLLPPYVKHLATPIAPIASRRSASCTIANSRVVSALS 481
Query: 458 LFETSFLNPIPLIIATISSFWPSSNPTS*RNISTTLISSTLFL 330
FETSFLNPIP+I+ATISSF PSS PTS RN+ T LISS L L
Sbjct: 482 FFETSFLNPIPVIMATISSFCPSSRPTSPRNLLTMLISSALSL 610
Score = 223 bits (481), Expect = 2e-057
Identities = 103/161 (63%), Positives = 115/161 (71%)
Frame = +3 / -1
Query: 339 CGGYERR*DVSSRGRIG*RPKG*NSGNY*GDGVQK*SFK*IYC*AHS*ICNCTRCRSPGC 518
CGGYE R VS RG +G NSG+Y DG+QK* FK C HS*+CN RCRS GC
Sbjct: 601 CGGYEHRQKVSWRGGSRGGTEGGNSGHYYRDGIQK*GFKEA*CRDHS*VCNRARCRSSGC 422
Query: 519 NWGNWYCKMFYIWW*QEQRIT*S*NSAT**LVEGKVHVQGREADINQSFS*EAF*TEGHD 698
NW +W CKMFYIW QEQ I *S* ++ * V+G+VHVQG E +IN SF *EAF* EGHD
Sbjct: 421 NWCDWRCKMFYIWREQEQCIA*S*RTSAG*FVKGEVHVQGGETNIN*SFP*EAF*VEGHD 242
Query: 699 EDRGREKES*EKA*VHGGICG*ILRRVEWQGLRLNNQVLSL 821
EDRG EKES EKA VHG CG*IL RVEWQGL+L NQ + L
Sbjct: 241 EDRGWEKESREKAQVHGDFCG*IL*RVEWQGLKLTNQTVGL 119
Score = 215 bits (463), Expect = 5e-055
Identities = 93/154 (60%), Positives = 111/154 (72%)
Frame = -2 / +1
Query: 813 KPGCSTSSPATPLFVEFSHKFLHEPMPFLSSPFPGLCLHHVLQFKKLLMKMID*CXXXXX 634
+ G STSSPATPLF+EFSHK LHE +PFL S FP LCLHHVLQ KKLLM+MI+*C
Sbjct: 127 RSGWSTSSPATPLFIEFSHKSLHELVPFLCSLFPSLCLHHVLQLKKLLMEMIN*CLFLLL 306
Query: 633 XXXXXLRQAITWQNSRIM*CAVLATTICKTSCNTNCPNCIQAICILYNCKFKSGLNNRFI 454
L Q I + RIM C VLA +ICKTSCN N NCIQ ICIL++CK KSGL + +
Sbjct: 307 GHVLLL*QIIPRKYVRIMQCTVLAPSICKTSCNANRTNCIQTICILHDCKLKSGLCIKLL 486
Query: 453 *NFIFEPHPLNNCHYFILLAFIQSYLLKKHLNDA 352
*N IFE HP NN HYF+LL+ ++++L KK +DA
Sbjct: 487 *NLIFESHPCNNGHYFLLLSLLETHLSKKPFDDA 588
Score = 204 bits (440), Expect = 7e-052
Identities = 95/157 (60%), Positives = 111/157 (70%)
Frame = +2 / -3
Query: 338 MWRI*ASLRCFFKR*DWMKAKRMK*WQLLRGWGSKMKFQINXXXXXXXXXXXYKMQIAWM 517
M RI*AS + F +R + +R K*W LL+GW SKM+FQ + KMQI WM
Sbjct: 602 MRRI*ASSKGFLERWVSRRDRRRK*WPLLQGWDSKMRFQRSLMQRPLLSLQSCKMQIVWM 423
Query: 518 QLGQLVLQDVLHMVVARTAHYMILEFCHVIACRRKSTCPRKRSRHQSIIFMRSFLN*RT* 697
QL +L LQDVLHM ART H MIL + I C+R+STCPR+R++HQ II MRSFL+*RT*
Sbjct: 422 QLVRLALQDVLHMEGARTVHCMILTYFRGIICQRRSTCPRRRNKHQLIISMRSFLS*RT* 243
Query: 698 *RQRPGKGELRKGIGSWRNLWLNSTKSGVAGLEVEQP 808
*RQR GK E RKG SWR LWLNS KSGVAGLEV+QP
Sbjct: 242 *RQRLGKREQRKGTSSWRLLWLNSMKSGVAGLEVDQP 132
Score = 160 bits (345), Expect = 9e-039
Identities = 75/127 (59%), Positives = 78/127 (61%)
Frame = -1 / +3
Query: 808 WLFNLKPCHSTLRRIQPQIPP*TYAXXXXXXXXXXXXXXXSV*KASHEND*LMSASLPWT 629
WL N KPCHSTL RIQPQ P*T A S *KASH ND*LM S PWT
Sbjct: 132 WLVNFKPCHSTLHRIQPQKSP*TCAFSLLSFSQPLSSSCPST*KASHGND*LMFVSPPWT 311
Query: 628 CTFPSTSYHVAEF*DHVMRCSCYHHM*NILQYQLPQLHPGDLHLVQLQIQEWAQQ*IYLK 449
CT P T+Y *DH M CSC HM*NILQ Q QLHP DLHL +LQ QEW+ * LK
Sbjct: 312 CTSPLTNYPAEVR*DHAMHCSCSLHM*NILQRQSHQLHPDDLHLARLQTQEWSLH*ASLK 491
Query: 448 LHF*TPS 428
HF* PS
Sbjct: 492 PHF*IPS 512
>gb|BI950822.1|BI950822 HVSMEl0023F04f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0023F04f, mRNA sequence
Length = 535
Score = 248 bits (537), Expect = 3e-065
Identities = 105/128 (82%), Positives = 115/128 (89%)
Frame = +1 / +2
Query: 271 RLLTVELAALLHDVGDYKYTKNNVEDMSVVEMFLQEVGLDEGQKDEIVAIIKGMGFKNEV 450
R L VELAALLHD+GDYK+TK+N EDMS+V+ FL EVGL+EGQK+EIVAII GMGFKNEV
Sbjct: 152 RFLIVELAALLHDIGDYKFTKDNAEDMSIVKRFLGEVGLEEGQKEEIVAIITGMGFKNEV 331
Query: 451 SNKSIVEPTLEFAIVQDADRLDAIGAIGIARCFTYGGSKNSALHDPRILPRDSLSKEKYM 630
S K E TLEFAIVQ ADRLDAIGAIG+ARCFTYGGSKNSALHDP +LPRD+LSKEKYM
Sbjct: 332 SKKLNAETTLEFAIVQYADRLDAIGAIGVARCFTYGGSKNSALHDPNVLPRDNLSKEKYM 511
Query: 631 SKEEKQTS 654
SKEEKQTS
Sbjct: 512 SKEEKQTS 535
Score = 211 bits (456), Expect(2) = 5e-060
Identities = 94/114 (82%), Positives = 98/114 (85%)
Frame = -3 / -2
Query: 653 DVCFSSLDMYFSFDKLSRGRILGSCNALFLLPPYVKHLAIPIAPIASRRSASCTIANSRV 474
DVCFSSLDMYFSFDKLSRG LGSCNALFLLPPYVKHLA PIAPIASRRSA CTIANSRV
Sbjct: 534 DVCFSSLDMYFSFDKLSRGSTLGSCNALFLLPPYVKHLATPIAPIASRRSAYCTIANSRV 355
Query: 473 GSTIDLFETSFLNPIPLIIATISSFWPSSNPTS*RNISTTLISSTLFLVYL*SP 312
S + FETSFLNPIP+I+ATISSF PSS PTS RN+ T LISS L LV L*SP
Sbjct: 354 VSALSFFETSFLNPIPVIMATISSFCPSSRPTSPRNLLTMLISSALSLVNL*SP 193
Score = 156 bits (336), Expect = 2e-037
Identities = 77/154 (50%), Positives = 92/154 (59%)
Frame = +2 / +3
Query: 191 PTTPRTRSASETLRSRSQPKRASPLPTASSPWNWPLSCTTLEITSIPRTMWRI*ASLRCF 370
P + T S S T S+P RA AS WNW SCTT ITS+PR M RI*AS + F
Sbjct: 72 PRSRLTPSRSGTSAFPSRPTRAFLPGPAS*SWNWLHSCTTSVITSLPRIMRRI*ASSKGF 251
Query: 371 FKR*DWMKAKRMK*WQLLRGWGSKMKFQINXXXXXXXXXXXYKMQIAWMQLGQLVLQDVL 550
+R + +R K*W LL+GW SKMKFQ + MQI WMQL L LQDVL
Sbjct: 252 LERWVSRRDRRRK*WPLLQGWDSKMKFQRSLMQRPLLSLQSCNMQIVWMQLVLLALQDVL 431
Query: 551 HMVVARTAHYMILEFCHVIACRRKSTCPRKRSRH 652
HM ART H MIL + I C+R+STCPR+R++H
Sbjct: 432 HMEGARTVHCMILTYFRGIICQRRSTCPRRRNKH 533
Score = 150 bits (323), Expect = 1e-035
Identities = 70/149 (46%), Positives = 91/149 (61%)
Frame = -2 / -1
Query: 612 QAITWQNSRIM*CAVLATTICKTSCNTNCPNCIQAICILYNCKFKSGLNNRFI*NFIFEP 433
Q I + RIM C VLA +ICKTSCN N NCIQ ICIL++CK KSGL + +*NFIFE
Sbjct: 493 QIIPRKYVRIMQCTVLAPSICKTSCNANSTNCIQTICILHDCKLKSGLCIKLL*NFIFES 314
Query: 432 HPLNNCHYFILLAFIQSYLLKKHLNDAXXXXXXXXXXXISNVVQESGQFHGEEAVGSGEA 253
HP NN HYF+LL+ ++++L KK +DA I++VVQE QFH EA A
Sbjct: 313 HPCNNGHYFLLLSLLETHLSKKPFDDAHILRIILGKLVITDVVQECSQFHD*EAGPGRNA 134
Query: 252 LFGCERERKVSDAERVRGVVGGIAPAHLP 166
L G E + +V + E V+ + G + P
Sbjct: 133 LVGREGKAEVPEREGVKRLRGRVGAGSSP 47
Score = 147 bits (315), Expect = 1e-034
Identities = 71/122 (58%), Positives = 81/122 (66%)
Frame = +3 / +1
Query: 288 TGRSPARRWRLQVYQEQCGGYERR*DVSSRGRIG*RPKG*NSGNY*GDGVQK*SFK*IYC 467
TG +PAR LQVYQ CGGYE R VS RG +G NSG+Y DG+QK*SFK C
Sbjct: 169 TGCTPARHR*LQVYQG*CGGYEHRQKVSWRGGSRGGTEGGNSGHYYRDGIQK*SFKEA*C 348
Query: 468 *AHS*ICNCTRCRSPGCNWGNWYCKMFYIWW*QEQRIT*S*NSAT**LVEGKVHVQGREA 647
HS*+CN CRS GCNW W CKMFYIW QEQ I *S* ++ * V+G+VHVQG E
Sbjct: 349 RDHS*VCNRAICRSSGCNWCYWRCKMFYIWREQEQCIA*S*RTSAG*FVKGEVHVQGGET 528
Query: 648 DI 653
+I
Sbjct: 529 NI 534
Score = 105 bits (224), Expect(2) = 5e-026
Identities = 46/75 (61%), Positives = 50/75 (66%)
Frame = -1 / -3
Query: 652 MSASLPWTCTFPSTSYHVAEF*DHVMRCSCYHHM*NILQYQLPQLHPGDLHLVQLQIQEW 473
M S PWTCT P T+Y *DH M CSC HM*NILQ Q QLHP DLH+ +LQ QEW
Sbjct: 533 MFVSPPWTCTSPLTNYPAEVR*DHAMHCSCSLHM*NILQRQ*HQLHPDDLHIARLQTQEW 354
Query: 472 AQQ*IYLKLHF*TPS 428
+ * LKLHF* PS
Sbjct: 353 SLH*ASLKLHF*IPS 309
Score = 40.5 bits (82), Expect(2) = 5e-060
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = -2 / -2
Query: 228 KVSDAERVRGVVGGIAPAHLPLHQLLRSPHRRRHF 124
K + + + G V G+ P HLPL L + HRRRHF
Sbjct: 108 KFPNGKGLNGFVEGLGPVHLPLX*FLGTRHRRRHF 4
Score = 32.7 bits (65), Expect(2) = 5e-026
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = -1 / -3
Query: 373 EETSQRRSYPPHCSWYTCN 317
+ET R SYPPH W TCN
Sbjct: 254 QETF*RCSYPPHYPW*TCN 198
>gb|AL500012.1|AL500012 AL500012 Hordeum vulgare Barke etiolated leaves Hordeum vulgare
subsp. vulgare cDNA clone HK04H18r 3', mRNA sequence
Length = 623
Score = 210 bits (454), Expect(2) = 1e-054
Identities = 85/94 (90%), Positives = 90/94 (95%)
Frame = +1 / -3
Query: 529 IGIARCFTYGGSKNSALHDPRILPRDSLSKEKYMSKEEKQTSINHFHEKLFKLKDMMKTE 708
IG+ARCFTYGGSKNSALHDP +LPRD+LSKEKYMSKEEKQTSINHFHEKLFKLKDMMKTE
Sbjct: 486 IGVARCFTYGGSKNSALHDPNVLPRDNLSKEKYMSKEEKQTSINHFHEKLFKLKDMMKTE 307
Query: 709 AGKRRAEKRHRFMEEFVAEFYEEWSGRA*G*TTR 810
AGK+RAEKRH+FME FVAEFYEEWSGRA* * TR
Sbjct: 306 AGKKRAEKRHKFMETFVAEFYEEWSGRA*S*PTR 205
Score = 149 bits (320), Expect = 3e-035
Identities = 66/93 (70%), Positives = 74/93 (79%)
Frame = +2 / -1
Query: 530 LVLQDVLHMVVARTAHYMILEFCHVIACRRKSTCPRKRSRHQSIIFMRSFLN*RT**RQR 709
L LQDVLHM ART H MIL + I C+R+STCPR+R++HQ II MRSFL+*RT**RQR
Sbjct: 485 LALQDVLHMEGARTVHCMILTYFRGIICQRRSTCPRRRNKHQLIISMRSFLS*RT**RQR 306
Query: 710 PGKGELRKGIGSWRNLWLNSTKSGVAGLEVEQP 808
GK E RKG SWR LWLNS KSGVAGLEV+QP
Sbjct: 305 LGKREQRKGTSSWRLLWLNSMKSGVAGLEVDQP 207
Score = 146 bits (314), Expect = 2e-034
Identities = 67/98 (68%), Positives = 75/98 (76%)
Frame = +3 / -2
Query: 528 NWYCKMFYIWW*QEQRIT*S*NSAT**LVEGKVHVQGREADINQSFS*EAF*TEGHDEDR 707
+W CKMFYIW QEQ I *S* ++ * V+G+VHVQG E +IN SF *EAF* EGHDEDR
Sbjct: 487 DWRCKMFYIWREQEQCIA*S*RTSAG*FVKGEVHVQGGETNIN*SFP*EAF*VEGHDEDR 308
Query: 708 GREKES*EKA*VHGGICG*ILRRVEWQGLRLNNQVLSL 821
G EKES EKA VHG CG*IL RVEWQGL+L NQ + L
Sbjct: 307 GWEKESREKAQVHGDFCG*IL*RVEWQGLKLTNQTVGL 194
Score = 143 bits (306), Expect(2) = 7e-035
Identities = 67/97 (69%), Positives = 67/97 (69%)
Frame = -3 / +2
Query: 818 AQNLVVQPQALPLHXXXXXXXXXXXNLCLFSALLFPASVFIMXXXXXXXXXXXLIDVCFS 639
A LV Q QALPLH NLCLFSAL FPASVFIM LIDVCFS
Sbjct: 197 AHGLVGQLQALPLHSS*NSATKVSMNLCLFSALFFPASVFIMSFNLKSFSWK*LIDVCFS 376
Query: 638 SLDMYFSFDKLSRGRILGSCNALFLLPPYVKHLAIPI 528
SLDMYFSFDKLSRG LGSCNALFLLPPYVKHLA PI
Sbjct: 377 SLDMYFSFDKLSRGSTLGSCNALFLLPPYVKHLATPI 487
Score = 133 bits (284), Expect = 2e-030
Identities = 60/95 (63%), Positives = 67/95 (70%)
Frame = -2 / +1
Query: 813 KPGCSTSSPATPLFVEFSHKFLHEPMPFLSSPFPGLCLHHVLQFKKLLMKMID*CXXXXX 634
+ G STSSPATPLF+EFSHK LHE +PFL S FP LCLHHVLQ KKLLM+MI+*C
Sbjct: 202 RSGWSTSSPATPLFIEFSHKSLHELVPFLCSLFPSLCLHHVLQLKKLLMEMIN*CLFLLL 381
Query: 633 XXXXXLRQAITWQNSRIM*CAVLATTICKTSCNTN 529
L Q I + RIM C VLA +ICKTSCN N
Sbjct: 382 GHVLLL*QIIPRKYVRIMQCTVLAPSICKTSCNAN 486
Score = 115 bits (246), Expect = 4e-025
Identities = 54/93 (58%), Positives = 55/93 (59%)
Frame = -1 / +3
Query: 808 WLFNLKPCHSTLRRIQPQIPP*TYAXXXXXXXXXXXXXXXSV*KASHEND*LMSASLPWT 629
WL N KPCHSTL RIQPQ P*T A S *KASH ND*LM S PWT
Sbjct: 207 WLVNFKPCHSTLHRIQPQKSP*TCAFSLLSFSQPLSSSCPST*KASHGND*LMFVSPPWT 386
Query: 628 CTFPSTSYHVAEF*DHVMRCSCYHHM*NILQYQ 530
CT P T+Y *DH M CSC HM*NILQ Q
Sbjct: 387 CTSPLTNYPAEVR*DHAMHCSCSLHM*NILQRQ 485
Score = 24.9 bits (48), Expect(2) = 7e-035
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -3 / +1
Query: 470 STIDLFETSFLNPIPL 423
S + FETS LNP P+
Sbjct: 550 SALSFFETSILNPNPV 597
Score = 23.5 bits (45), Expect(2) = 1e-054
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = +2 / -2
Query: 422 LRGWGSKMKFQ 454
L+GW SK++FQ
Sbjct: 598 LQGWDSKLRFQ 566
>gb|CA012379.1|CA012379 HT05E07r HT Hordeum vulgare subsp. vulgare cDNA clone HT05E07
5-PRIME, mRNA sequence
Length = 379
Score = 191 bits (411), Expect = 7e-048
Identities = 83/112 (74%), Positives = 89/112 (79%)
Frame = +1 / +1
Query: 178 GRDASHDAAHALRVRDXXXXXXXXXXXXXPDRLLTVELAALLHDVGDYKYTKNNVEDMSV 357
GRDASHDAAHALRVRD PDRLL VELAALLHD+GDYKYTK+N EDMS+
Sbjct: 43 GRDASHDAAHALRVRDLALSLAAEQGVSSPDRLLIVELAALLHDIGDYKYTKDNAEDMSI 222
Query: 358 VEMFLQEVGLDEGQKDEIVAIIKGMGFKNEVSNKSIVEPTLEFAIVQDADRL 513
V+ FL EVGL+EGQK+EIVAII GMGFKNEVS K E TLEFAIVQDADRL
Sbjct: 223 VKRFLGEVGLEEGQKEEIVAIITGMGFKNEVSKKLNAETTLEFAIVQDADRL 378
Score = 156 bits (335), Expect = 2e-037
Identities = 69/121 (57%), Positives = 85/121 (70%)
Frame = -2 / -2
Query: 513 QAICILYNCKFKSGLNNRFI*NFIFEPHPLNNCHYFILLAFIQSYLLKKHLNDAXXXXXX 334
Q ICIL++CK KSGL + +*N IFE HP NN HYF+LL+ ++++L KK +DA
Sbjct: 378 QTICILHDCKLKSGLCIKLL*NLIFESHPCNNGHYFLLLSLLETHLSKKPFDDAHILRII 199
Query: 333 XXXXXISNVVQESGQFHGEEAVGSGEALFGCERERKVSDAERVRGVVGGIAPAHLPLHQL 154
I++VVQE QFH EEAV G+AL G E ER+V DAE V GVVGG+APAHLPLH L
Sbjct: 198 LGILVITDVVQECSQFHDEEAVRGGDALLGGEGEREVPDAECVSGVVGGVAPAHLPLH*L 19
Query: 153 L 151
L
Sbjct: 18 L 16
Score = 133 bits (285), Expect = 2e-030
Identities = 64/113 (56%), Positives = 71/113 (62%)
Frame = +2 / +2
Query: 176 AGAMPPTTPRTRSASETLRSRSQPKRASPLPTASSPWNWPLSCTTLEITSIPRTMWRI*A 355
AGA PPTTP T SAS T RS S P RASP TASS WNW SCTT ITSIPR M RI*A
Sbjct: 41 AGATPPTTPLTHSASGTSRSPSPPSRASPPRTASSSWNWLHSCTTSVITSIPRIMRRI*A 220
Query: 356 SLRCFFKR*DWMKAKRMK*WQLLRGWGSKMKFQINXXXXXXXXXXXYKMQIAW 514
S + F +R + +R K*W LL+GW SKM+FQ + KMQI W
Sbjct: 221 SSKGFLERWVSRRDRRRK*WPLLQGWDSKMRFQRSLMQRPLLSLQSCKMQIVW 379
Score = 113 bits (242), Expect = 1e-024
Identities = 52/67 (77%), Positives = 56/67 (83%)
Frame = -3 / -3
Query: 512 RRSASCTIANSRVGSTIDLFETSFLNPIPLIIATISSFWPSSNPTS*RNISTTLISSTLF 333
RRSASCTIANSRV S + FETSFLNPIP+I+ATISSF PSS PTS RN+ T LISS L
Sbjct: 377 RRSASCTIANSRVVSALSFFETSFLNPIPVIMATISSFCPSSRPTSPRNLLTMLISSALS 198
Query: 332 LVYL*SP 312
LVYL*SP
Sbjct: 197 LVYL*SP 177
>gb|AL450843.1|AL450843 AL450843 Hordeum vulgare Barke etiolated leaves Hordeum vulgare
subsp. vulgare cDNA clone HK04H18u 5', mRNA sequence
Length = 645
Score = 138 bits (296), Expect(3) = 6e-035
Identities = 58/87 (66%), Positives = 68/87 (78%)
Frame = +1 / +1
Query: 211 LRVRDXXXXXXXXXXXXXPDRLLTVELAALLHDVGDYKYTKNNVEDMSVVEMFLQEVGLD 390
LRVRD PDRLL VELAALLHD+GDYKYTK+N EDMS+V+ FL EVGL+
Sbjct: 124 LRVRDLALSLAAEQGVSSPDRLLIVELAALLHDIGDYKYTKDNAEDMSIVKRFLGEVGLE 303
Query: 391 EGQKDEIVAIIKGMGFKNEVSNKSIVE 471
EGQK+EIVAII GMGFKNEVS +S+++
Sbjct: 304 EGQKEEIVAIITGMGFKNEVSKESLMQ 384
Score = 104 bits (222), Expect(2) = 3e-023
Identities = 50/81 (61%), Positives = 56/81 (69%)
Frame = +2 / +2
Query: 212 SASETLRSRSQPKRASPLPTASSPWNWPLSCTTLEITSIPRTMWRI*ASLRCFFKR*DWM 391
SAS T RS S P RASP TASS WNW SCTT ITSIPR M RI*AS + F +R
Sbjct: 125 SASGTSRSPSPPSRASPPRTASSSWNWLHSCTTSVITSIPRIMRRI*ASSKGFLERWVSR 304
Query: 392 KAKRMK*WQLLRGWGSKMKFQ 454
+ +R K*W LL+GW SKM+FQ
Sbjct: 305 RDRRRK*WPLLQGWDSKMRFQ 367
Score = 95.5 bits (202), Expect(2) = 5e-032
Identities = 43/83 (51%), Positives = 54/83 (65%)
Frame = -2 / -1
Query: 459 FI*NFIFEPHPLNNCHYFILLAFIQSYLLKKHLNDAXXXXXXXXXXXISNVVQESGQFHG 280
F *N IFE HP NN HYF+LL+ ++++L KK +DA I++VVQE QFH
Sbjct: 372 FF*NLIFESHPCNNGHYFLLLSLLETHLSKKPFDDAHILRIILGILVITDVVQECSQFHD 193
Query: 279 EEAVGSGEALFGCERERKVSDAE 211
EEAV G+AL G E ER+V DAE
Sbjct: 192 EEAVRGGDALLGGEGEREVPDAE 124
Score = 62.9 bits (131), Expect(2) = 5e-032
Identities = 24/31 (77%), Positives = 27/31 (87%)
Frame = -2 / -3
Query: 207 VRGVVGGIAPAHLPLHQLLRSPHRRRHFDLR 115
V GVVGG+APAHLPLH LL +PHRRRHF +R
Sbjct: 121 VSGVVGGVAPAHLPLH*LLGTPHRRRHFSVR 29
Score = 28.1 bits (55), Expect(3) = 6e-035
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1 / +2
Query: 178 GRDASHDAAH 207
GRDASHDAAH
Sbjct: 92 GRDASHDAAH 121
Score = 24.4 bits (47), Expect(2) = 3e-023
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +2 / +3
Query: 176 AGAMPPTTPRT 208
AGA PPTTP T
Sbjct: 90 AGATPPTTPLT 122
Score = 23.5 bits (45), Expect(3) = 6e-035
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +1 / +2
Query: 619 EKYMSKEEKQTSINHFHEKLF 681
E ++ + +KQTSIN F + F
Sbjct: 554 EIHVQRRKKQTSINQFQ*ETF 616
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 477,550,386
Number of Sequences: 312970
Number of extensions: 7385391
Number of successful extensions: 77393
Number of sequences better than 1.0e-020: 15
length of database: 58,378,179
effective HSP length: 53
effective length of database: 41,790,769
effective search space used: 13122301466
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)