TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QAW3a11.yg.2.1
(969 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CK123727.1|CK123727 BES1824105d06 BES1824 Hordeum vulgar... 411 e-114
gb|BJ465104.1|BJ465104 BJ465104 K. Sato unpublished cDNA li... 398 e-110
gb|CV055942.1|CV055942 BNEL12B7 Barley EST endosperm librar... 397 e-110
gb|BU969156.1|BU969156 HB10L09r BC Hordeum vulgare subsp. v... 346 1e-094
gb|BG345023.1|BG345023 HVSMEg0018F09f Hordeum vulgare pre-a... 316 1e-085
gb|BJ447514.1|BJ447514 BJ447514 K. Sato unpublished cDNA li... 309 1e-083
gb|BJ455274.1|BJ455274 BJ455274 K. Sato unpublished cDNA li... 309 1e-083
gb|AV916779.1|AV916779 AV916779 K. Sato unpublished cDNA li... 234 3e-079
gb|CA032787.1|CA032787 HX14D07r HX Hordeum vulgare subsp. v... 294 4e-079
gb|AV922076.1|AV922076 AV922076 K. Sato unpublished cDNA li... 294 6e-079
gb|CA032293.1|CA032293 HX12J15r HX Hordeum vulgare subsp. v... 294 6e-079
gb|BG343589.1|BG343589 HVSMEg0006H13f Hordeum vulgare pre-a... 289 2e-077
gb|AV837092.1|AV837092 AV837092 K. Sato unpublished cDNA li... 280 8e-075
gb|BJ468235.1|BJ468235 BJ468235 K. Sato unpublished cDNA li... 271 3e-072
gb|BE060385.2|BE060385 HVSMEg0012C17f Hordeum vulgare pre-a... 252 3e-066
gb|BM372595.2|BM372595 EBpi05_SQ003_G13_R pistil, 8 DPA, no... 248 4e-065
gb|BI956176.1|BI956176 HVSMEm0025O15f Hordeum vulgare green... 244 6e-064
gb|BJ549963.1|BJ549963 BJ549963 K. Sato unpublished cDNA li... 236 2e-061
gb|BU968630.1|BU968630 HB08B19r BC Hordeum vulgare subsp. v... 186 3e-061
gb|BU979822.1|BU979822 HA17H16r HA Hordeum vulgare subsp. v... 211 4e-054
gb|BG417087.1|BG417087 HVSMEk0016D06f Hordeum vulgare testa... 207 7e-053
gb|BM443862.2|BM443862 EBem09_SQ001_M07_R embryo, 1 Day ger... 207 7e-053
gb|AJ432742.1|AJ432742 AJ432742 S00002 Hordeum vulgare subs... 197 1e-049
gb|BJ549178.1|BJ549178 BJ549178 K. Sato unpublished cDNA li... 193 1e-048
gb|BM444115.1|BM444115 EBem09_SQ004_D08_R embryo, 1 Day ger... 185 4e-046
gb|AV931472.1|AV931472 AV931472 K. Sato unpublished cDNA li... 182 3e-045
gb|AV909171.1|AV909171 AV909171 K. Sato unpublished cDNA li... 181 7e-045
gb|AV911054.1|AV911054 AV911054 K. Sato unpublished cDNA li... 181 7e-045
gb|BJ544949.1|BJ544949 BJ544949 K. Sato unpublished cDNA li... 181 7e-045
gb|BJ546433.1|BJ546433 BJ546433 K. Sato unpublished cDNA li... 181 7e-045
gb|AV833846.1|AV833846 AV833846 K. Sato unpublished cDNA li... 100 9e-044
gb|AL510176.1|AL510176 AL510176 Hordeum vulgare Barke devel... 111 2e-041
gb|AV930935.1|AV930935 AV930935 K. Sato unpublished cDNA li... 168 4e-041
gb|BM444949.1|BM444949 EBem09_SQ006_P20_R embryo, 1 Day ger... 166 1e-040
gb|BJ467937.1|BJ467937 BJ467937 K. Sato unpublished cDNA li... 113 1e-040
gb|CB881764.1|CB881764 HM10N01w HM Hordeum vulgare subsp. v... 156 2e-037
gb|AV833832.1|AV833832 AV833832 K. Sato unpublished cDNA li... 131 1e-036
gb|BQ460226.1|BQ460226 HA06N23r HA Hordeum vulgare subsp. v... 127 1e-028
gb|BF266558.3|BF266558 HV_CEa0015H07f Hordeum vulgare seedl... 101 5e-028
gb|BU986456.1|BU986456 HF11O19r HF Hordeum vulgare subsp. v... 122 3e-027
gb|BI777829.2|BI777829 EBro08_SQ002_D17_R root, 3 week, dro... 76 5e-027
gb|CA018769.1|CA018769 HV09J15r HV Hordeum vulgare subsp. v... 115 4e-025
gb|BJ463761.1|BJ463761 BJ463761 K. Sato unpublished cDNA li... 111 5e-024
gb|CK124684.1|CK124684 BES1824109p11 BES1824 Hordeum vulgar... 76 5e-024
gb|AV834161.1|AV834161 AV834161 K. Sato unpublished cDNA li... 86 3e-022
>gb|CK123727.1|CK123727 BES1824105d06 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010D065 5-PRIME, mRNA sequence
Length = 786
Score = 411 bits (892), Expect = e-114
Identities = 154/170 (90%), Positives = 159/170 (93%)
Frame = +1 / +1
Query: 73 DLTXXWDVDLNGKVNXXXXXCGXSFHRFDKYLNFSNPHIARNFDPNACGWAYGMNIFDLR 252
DLT WDVDLNG VN CG SFHRFDKYLNFSNPHIARNFDPNACGWAYGMNIFDL+
Sbjct: 19 DLTGLWDVDLNGMVNGAVFTCGESFHRFDKYLNFSNPHIARNFDPNACGWAYGMNIFDLK 198
Query: 253 EWKKKDITGIYHKWQNMNEDRVLWKLGTLPPGLLTFYKLTHPLDKSWHVLGLGYNPSIDR 432
+WK KDITGIYHKWQNMNEDRVLWKLGTLPPGL+TFYKLTHPLDKSWHVLGLGYNPSIDR
Sbjct: 199 QWKNKDITGIYHKWQNMNEDRVLWKLGTLPPGLMTFYKLTHPLDKSWHVLGLGYNPSIDR 378
Query: 433 SEIDNAAVVHYNGNMKPWLELAMTKYRPYWTKYIKYDHPYIRGCNLSE*I 582
SEIDNAAV HYNGNMKPWLELAMTKYRPYWT+YIKYDHPYIRGCNLSE*+
Sbjct: 379 SEIDNAAVAHYNGNMKPWLELAMTKYRPYWTRYIKYDHPYIRGCNLSE*M 528
Score = 309 bits (669), Expect = 2e-083
Identities = 135/173 (78%), Positives = 139/173 (80%)
Frame = -2 / -2
Query: 590 STTIYSLKLHPRM*G*SYLIYLVQYGRYLVIASSSHGFMFPL**TTAALSISERSMLGLY 411
S IYSL+LHPRM*G SY IYLVQYGRYLVIASSSHGFMFPL** TAALSISERSMLGLY
Sbjct: 536 SYLIYSLRLHPRM*GWSYFIYLVQYGRYLVIASSSHGFMFPL**ATAALSISERSMLGLY 357
Query: 410 PNPRTCHDLSSGCVNL*KVKRPGGSVPSFQRTLSSFIFCHLW*IPVISFFFHSLRSKMFI 231
P+PRTCHDLS GCV+L* V RPGGSVPSFQRTLSSF+FCHLW*IPVIS FFH RSKMFI
Sbjct: 356 PSPRTCHDLSRGCVSL*NVMRPGGSVPSFQRTLSSFMFCHLW*IPVISLFFHCFRSKMFI 177
Query: 230 P*AQPHAFGSKFRAMCGFEXXXXXXXXXXXXPQXXXXXLTFPLRSTSHXXVKS 72
P*AQP A GSKFRAMCGFE PQ LT P RSTSH VKS
Sbjct: 176 P*AQPQALGSKFRAMCGFEKLRYLSKRWKLSPQVNTAPLTIPFRSTSHNPVKS 18
Score = 297 bits (644), Expect = 5e-080
Identities = 122/169 (72%), Positives = 134/169 (79%)
Frame = +3 / +3
Query: 75 FNXXVGC*S*WKGQXXXXXLWXEFSPF*QIS*FFKSTHCSEL*SKCMWLGLWDEHL*SEG 254
F+ VGC*S W GQ LW EF PF Q+ * KSTHCSEL*S C+WLGLWDEHL*SE
Sbjct: 21 FDRIVGC*SEWNGQWCSVYLWREFPPFRQVP*LLKSTHCSEL*S*CLWLGLWDEHL*SEA 200
Query: 255 VEEERYYWDLPQMAKYE*RQGPLEAWDTSAWPLDLL*VDAPTGQVMACSWIRIQPKH*PF 434
+EE+RYY DLPQ+AK+E*RQG LEA DTS WP D+L DAP ++AC W RIQPKH P
Sbjct: 201 MEEQRYYRDLPQVAKHE*RQGSLEARDTSTWPHDVLQADAPP**IVACPWTRIQPKHRPL 380
Query: 435 RDRQCCCGSLQWEHEAMAGASNDQVPTILDQVYQV*SPLHPWMQLE*VD 581
RDRQCCC SLQWEHEAMAGA NDQVPTILD+VY+V* PLHPWMQ E*VD
Sbjct: 381 RDRQCCCRSLQWEHEAMAGAGNDQVPTILDKVYKV*PPLHPWMQPE*VD 527
Score = 295 bits (639), Expect = 2e-079
Identities = 122/168 (72%), Positives = 132/168 (78%)
Frame = -3 / -3
Query: 577 THSSCIHGCKGDHT*YTWSNMVGTWSLLAPAMASCSHCNEPQQHCLSLNGQCLGCILIQE 398
THS CIHGCKG HT YT S+MVGTWSL APAMASCSHCNE QQHCLSL+G+CLGCIL+Q
Sbjct: 523 THSGCIHGCKGGHTLYTLSSMVGTWSLPAPAMASCSHCNERQQHCLSLSGRCLGCILVQG 344
Query: 397 HAMTCPVGASTYRRSRGQAEVSQASKGPCLHSYFAICGRSQ*YLSSSTPSDQRCSSHKPS 218
HA GAS R S GQ EVS+ASK PCLHS FA CGRS+*YL SS SDQRCSSHKP+
Sbjct: 343 HATIYQGGASACRTS*GQVEVSRASKEPCLHSCFATCGRSR*YLCSSIASDQRCSSHKPN 164
Query: 217 HMHLDQSSEQCVDLKN*DICQNGENSXHRXXXXH*PFH*DQHPTXLLN 74
H H DQSSEQCVDL++* C+NG NS HR H*PFH DQHPT L N
Sbjct: 163 HKH*DQSSEQCVDLRS*GTCRNGGNSLHR*TLHH*PFHSDQHPTILSN 20
Score = 241 bits (521), Expect = 4e-063
Identities = 125/170 (73%), Positives = 129/170 (75%)
Frame = +2 / +2
Query: 74 I*QXCGMLILMERSMXXXXPVXXVFTVLTNILIFQIHTLLGTLIQMHVAGLMG*TSLI*G 253
I*Q CGMLI ME SM PV V TV T+ L QIHTLLGTLI M V GLMG*TSLI*
Sbjct: 20 I*QDCGMLI*MEWSMVQCLPVERVSTVSTSTLTSQIHTLLGTLILMLVVGLMG*TSLI*S 199
Query: 254 SGRRKILLGSTTNGKI*MKTGSFGSLGHFRLAS*PSIS*RTHWTSHGMFLD*DTTQALTV 433
+GR KIL GSTT+GK *MKTG FGS GHF LAS* S S*RT + GM LD*DTTQA T
Sbjct: 200 NGRTKILPGSTTSGKT*MKTGFFGSSGHFHLAS*RSTS*RTPLINRGMSLD*DTTQASTA 379
Query: 434 QR*TMLLWFITMGT*SHGWS*Q*PSTDHIGPSISSMITLTSVDAT*VSR* 583
QR*TMLL ITMGT*SHGWS Q*PSTDH G I SM TLTSVDAT*VSR*
Sbjct: 380 QR*TMLLSLITMGT*SHGWSWQ*PSTDHTGQGI*SMTTLTSVDAT*VSR* 529
Score = 238 bits (514), Expect = 4e-062
Identities = 101/132 (76%), Positives = 114/132 (86%)
Frame = -1 / -1
Query: 582 YLLTQVASTDVRVIILDILGPIWSVLGHC*LQPWLHVPIVMNHSSIVYL*TVNAWVVS*S 403
+LLTQVASTDVRV+IL I P+WSVLGHC LQPWLHVPIVM+ SSIVYL* V+AWVVS*S
Sbjct: 528 HLLTQVASTDVRVVILYIPCPVWSVLGHCQLQPWLHVPIVMSDSSIVYL*AVDAWVVS*S 349
Query: 402 KNMP*LVQWVRQLIEGQEARRKCPKLPKDPVFIHILPFVVDPSNIFLLPLPQIKDVHPIS 223
K+MP ++ VRQL+E EAR KCP+LPK+PVFIH+LP VVDP NIF+LPL QIKDVHPIS
Sbjct: 348 KDMPRFIKGVRQLVERHEARWKCPELPKNPVFIHVLPLVVDPGNIFVLPLLQIKDVHPIS 169
Query: 222 PATCIWIKVPSN 187
P T I IKVPSN
Sbjct: 168 PTTSIRIKVPSN 133
>gb|BJ465104.1|BJ465104 BJ465104 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags37m09 5', mRNA sequence
Length = 598
Score = 398 bits (863), Expect = e-110
Identities = 151/175 (86%), Positives = 155/175 (88%)
Frame = +1 / +2
Query: 1 FYLPXVYPKLXXXLFXXXDIVVXXDLTXXWDVDLNGKVNXXXXXCGXSFHRFDKYLNFSN 180
FYLP +YPKL LF DIVV DLT WDVDLNG VN CG SFHRFDKYLNFSN
Sbjct: 74 FYLPQIYPKLDKILFLDDDIVVQKDLTGLWDVDLNGMVNGAVFTCGESFHRFDKYLNFSN 253
Query: 181 PHIARNFDPNACGWAYGMNIFDLREWKKKDITGIYHKWQNMNEDRVLWKLGTLPPGLLTF 360
PHIARNFDPNACGWAYGMNIFDL++WK KDITGIYHKWQNMNEDRVLWKLGTLPPGL+TF
Sbjct: 254 PHIARNFDPNACGWAYGMNIFDLKQWKNKDITGIYHKWQNMNEDRVLWKLGTLPPGLMTF 433
Query: 361 YKLTHPLDKSWHVLGLGYNPSIDRSEIDNAAVVHYNGNMKPWLELAMTKYRPYWT 525
YKLTHPLDKSWHVLGLGYNPSIDRSEIDNAAV HYNGNMKPWLELAMTKYRPYWT
Sbjct: 434 YKLTHPLDKSWHVLGLGYNPSIDRSEIDNAAVAHYNGNMKPWLELAMTKYRPYWT 598
Score = 295 bits (639), Expect = 2e-079
Identities = 131/174 (75%), Positives = 134/174 (77%)
Frame = -2 / -2
Query: 524 VQYGRYLVIASSSHGFMFPL**TTAALSISERSMLGLYPNPRTCHDLSSGCVNL*KVKRP 345
VQYGRYLVIASSSHGFMFPL** TAALSISERSMLGLYP+PRTCHDLS GCV+L* V RP
Sbjct: 597 VQYGRYLVIASSSHGFMFPL**ATAALSISERSMLGLYPSPRTCHDLSRGCVSL*NVMRP 418
Query: 344 GGSVPSFQRTLSSFIFCHLW*IPVISFFFHSLRSKMFIP*AQPHAFGSKFRAMCGFEXXX 165
GGSVPSFQRTLSSF+FCHLW*IPVIS FFH RSKMFIP*AQP A GSKFRAMCGFE
Sbjct: 417 GGSVPSFQRTLSSFMFCHLW*IPVISLFFHCFRSKMFIP*AQPQALGSKFRAMCGFEKLR 238
Query: 164 XXXXXXXXXPQXXXXXLTFPLRSTSHXXVKSXXTTMSXXXKXXXSNFG*TXGR* 3
PQ LT P RSTSH VKS TTMS K SNFG* GR*
Sbjct: 237 YLSKRWKLSPQVNTAPLTIPFRSTSHNPVKSFCTTMSSSRKSILSNFG*ICGR* 76
Score = 287 bits (621), Expect = 7e-077
Identities = 120/174 (68%), Positives = 130/174 (74%)
Frame = +3 / +1
Query: 3 LSPXGLSKVGXXXLPXX*HSCXXXFNXXVGC*S*WKGQXXXXXLWXEFSPF*QIS*FFKS 182
LSP LSKVG P *HSC F+ VGC*S W GQ LW EF PF Q+ * KS
Sbjct: 76 LSPTDLSKVG*DTFPR**HSCAERFDRIVGC*SEWNGQWCSVYLWREFPPFRQVP*LLKS 255
Query: 183 THCSEL*SKCMWLGLWDEHL*SEGVEEERYYWDLPQMAKYE*RQGPLEAWDTSAWPLDLL 362
THCSEL*S C+WLGLWDEHL*SE +EE+RYY DLPQ+AK+E*RQG LEA DTS WP D+L
Sbjct: 256 THCSEL*S*CLWLGLWDEHL*SEAMEEQRYYRDLPQVAKHE*RQGSLEARDTSTWPHDVL 435
Query: 363 *VDAPTGQVMACSWIRIQPKH*PFRDRQCCCGSLQWEHEAMAGASNDQVPTILD 524
DAP ++AC W RIQPKH P RDRQCCC SLQWEHEAMAGA NDQVPTILD
Sbjct: 436 QADAPP**IVACPWTRIQPKHRPLRDRQCCCRSLQWEHEAMAGAGNDQVPTILD 597
Score = 285 bits (616), Expect = 3e-076
Identities = 119/174 (68%), Positives = 131/174 (75%)
Frame = -3 / -3
Query: 523 SNMVGTWSLLAPAMASCSHCNEPQQHCLSLNGQCLGCILIQEHAMTCPVGASTYRRSRGQ 344
S+MVGTWSL APAMASCSHCNE QQHCLSL+G+CLGCIL+Q HA GAS R S GQ
Sbjct: 596 SSMVGTWSLPAPAMASCSHCNERQQHCLSLSGRCLGCILVQGHATIYQGGASACRTS*GQ 417
Query: 343 AEVSQASKGPCLHSYFAICGRSQ*YLSSSTPSDQRCSSHKPSHMHLDQSSEQCVDLKN*D 164
EVS+ASK PCLHS FA CGRS+*YL SS SDQRCSSHKP+H H DQSSEQCVDL++*
Sbjct: 416 VEVSRASKEPCLHSCFATCGRSR*YLCSSIASDQRCSSHKPNHKH*DQSSEQCVDLRS*G 237
Query: 163 ICQNGENSXHRXXXXH*PFH*DQHPTXLLNXXXQLCXXXGRXXXPTLDRPXGDR 2
C+NG NS HR H*PFH DQHPT L N QLC G+ PTLDR GD+
Sbjct: 236 TCRNGGNSLHR*TLHH*PFHSDQHPTILSNLSAQLCHHRGKVSYPTLDRSVGDK 75
Score = 231 bits (499), Expect = 5e-060
Identities = 120/173 (69%), Positives = 124/173 (71%)
Frame = +2 / +3
Query: 5 ISXXSIQSWXXXSSXXXT*LXXXI*QXCGMLILMERSMXXXXPVXXVFTVLTNILIFQIH 184
IS SIQSW S T*L I*Q CGMLI ME SM PV V TV T+ L QIH
Sbjct: 78 ISHRSIQSWIRYFSSMMT*LCRKI*QDCGMLI*MEWSMVQCLPVERVSTVSTSTLTSQIH 257
Query: 185 TLLGTLIQMHVAGLMG*TSLI*GSGRRKILLGSTTNGKI*MKTGSFGSLGHFRLAS*PSI 364
TLLGTLI M V GLMG*TSLI* +GR KIL GSTT+GK *MKTG FGS GHF LAS* S
Sbjct: 258 TLLGTLILMLVVGLMG*TSLI*SNGRTKILPGSTTSGKT*MKTGFFGSSGHFHLAS*RST 437
Query: 365 S*RTHWTSHGMFLD*DTTQALTVQR*TMLLWFITMGT*SHGWS*Q*PSTDHIG 523
S*RT + GM LD*DTTQA T QR*TMLL ITMGT*SHGWS Q*PSTDH G
Sbjct: 438 S*RTPLINRGMSLD*DTTQASTAQR*TMLLSLITMGT*SHGWSWQ*PSTDHTG 596
Score = 210 bits (452), Expect(2) = 5e-063
Identities = 86/112 (76%), Positives = 97/112 (86%)
Frame = -1 / -1
Query: 522 PIWSVLGHC*LQPWLHVPIVMNHSSIVYL*TVNAWVVS*SKNMP*LVQWVRQLIEGQEAR 343
P+WSVLGHC LQPWLHVPIVM+ SSIVYL* V+AWVVS*SK+MP ++ VRQL+E EAR
Sbjct: 595 PVWSVLGHCQLQPWLHVPIVMSDSSIVYL*AVDAWVVS*SKDMPRFIKGVRQLVERHEAR 416
Query: 342 RKCPKLPKDPVFIHILPFVVDPSNIFLLPLPQIKDVHPISPATCIWIKVPSN 187
KCP+LPK+PVFIH+LP VVDP NIF+LPL QIKDVHPISP T I IKVPSN
Sbjct: 415 WKCPELPKNPVFIHVLPLVVDPGNIFVLPLLQIKDVHPISPTTSIRIKVPSN 260
Score = 51.9 bits (107), Expect(2) = 5e-063
Identities = 23/44 (52%), Positives = 26/44 (59%)
Frame = -1 / -1
Query: 132 GXXXXIDLSIKINIPXXC*IXXHNYVXXXEEXXXQLWIDXXEIE 1
G ID SI+INIP C I HNYV E+ QLWID EI+
Sbjct: 205 GKHCTIDHSIQINIPQSCQIFLHNYVIIEEKYLIQLWIDLWEIK 74
>gb|CV055942.1|CV055942 BNEL12B7 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL12B7 5' similar to 68 kDa
protein, mRNA sequence
Length = 616
Score = 397 bits (862), Expect = e-110
Identities = 149/163 (91%), Positives = 154/163 (94%)
Frame = +1 / +1
Query: 94 VDLNGKVNXXXXXCGXSFHRFDKYLNFSNPHIARNFDPNACGWAYGMNIFDLREWKKKDI 273
VDLNG VN CG SFHRFDKYLNFSNPHIARNFDPNACGWAYGMNIFDL++WK KDI
Sbjct: 1 VDLNGMVNGAVFTCGESFHRFDKYLNFSNPHIARNFDPNACGWAYGMNIFDLKQWKNKDI 180
Query: 274 TGIYHKWQNMNEDRVLWKLGTLPPGLLTFYKLTHPLDKSWHVLGLGYNPSIDRSEIDNAA 453
TGIYHKWQNMNEDRVLWKLGTLPPGL+TFYKLTHPLDKSWHVLGLGYNPSIDRSEIDNAA
Sbjct: 181 TGIYHKWQNMNEDRVLWKLGTLPPGLMTFYKLTHPLDKSWHVLGLGYNPSIDRSEIDNAA 360
Query: 454 VVHYNGNMKPWLELAMTKYRPYWTKYIKYDHPYIRGCNLSE*I 582
V HYNGNMKPWLELAMTKYRPYWT+YIKYDHPYIRGCNLSE*+
Sbjct: 361 VAHYNGNMKPWLELAMTKYRPYWTRYIKYDHPYIRGCNLSE*M 489
Score = 297 bits (642), Expect = 9e-080
Identities = 129/165 (78%), Positives = 133/165 (80%)
Frame = -2 / -3
Query: 590 STTIYSLKLHPRM*G*SYLIYLVQYGRYLVIASSSHGFMFPL**TTAALSISERSMLGLY 411
S IYSL+LHPRM*G SY IYLVQYGRYLVIASSSHGFMFPL** TAALSISERSMLGLY
Sbjct: 497 SYLIYSLRLHPRM*GWSYFIYLVQYGRYLVIASSSHGFMFPL**ATAALSISERSMLGLY 318
Query: 410 PNPRTCHDLSSGCVNL*KVKRPGGSVPSFQRTLSSFIFCHLW*IPVISFFFHSLRSKMFI 231
P+PRTCHDLS GCV+L* V RPGGSVPSFQRTLSSF+FCHLW*IPVIS FFH RSKMFI
Sbjct: 317 PSPRTCHDLSRGCVSL*NVMRPGGSVPSFQRTLSSFMFCHLW*IPVISLFFHCFRSKMFI 138
Query: 230 P*AQPHAFGSKFRAMCGFEXXXXXXXXXXXXPQXXXXXLTFPLRS 96
P*AQP A GSKFRAMCGFE PQ LT P RS
Sbjct: 137 P*AQPQALGSKFRAMCGFEKLRYLSKRWKLSPQVNTAPLTIPFRS 3
Score = 286 bits (620), Expect = 9e-077
Identities = 118/162 (72%), Positives = 129/162 (79%)
Frame = +3 / +3
Query: 96 *S*WKGQXXXXXLWXEFSPF*QIS*FFKSTHCSEL*SKCMWLGLWDEHL*SEGVEEERYY 275
*S W GQ LW EF PF Q+ * KSTHCSEL*S C+WLGLWDEHL*SE +EE+RYY
Sbjct: 3 *SEWNGQWCSVYLWREFPPFRQVP*LLKSTHCSEL*S*CLWLGLWDEHL*SEAMEEQRYY 182
Query: 276 WDLPQMAKYE*RQGPLEAWDTSAWPLDLL*VDAPTGQVMACSWIRIQPKH*PFRDRQCCC 455
DLPQ+AK+E*RQG LEA DTS WP D+L DAP ++AC W RIQPKH P RDRQCCC
Sbjct: 183 RDLPQVAKHE*RQGSLEARDTSTWPHDVLQADAPP**IVACPWTRIQPKHRPLRDRQCCC 362
Query: 456 GSLQWEHEAMAGASNDQVPTILDQVYQV*SPLHPWMQLE*VD 581
SLQWEHEAMAGA NDQVPTILD+VY+V* PLHPWMQ E*VD
Sbjct: 363 RSLQWEHEAMAGAGNDQVPTILDKVYKV*PPLHPWMQPE*VD 488
Score = 283 bits (612), Expect = 1e-075
Identities = 117/161 (72%), Positives = 127/161 (78%)
Frame = -3 / -1
Query: 577 THSSCIHGCKGDHT*YTWSNMVGTWSLLAPAMASCSHCNEPQQHCLSLNGQCLGCILIQE 398
THS CIHGCKG HT YT S+MVGTWSL APAMASCSHCNE QQHCLSL+G+CLGCIL+Q
Sbjct: 484 THSGCIHGCKGGHTLYTLSSMVGTWSLPAPAMASCSHCNERQQHCLSLSGRCLGCILVQG 305
Query: 397 HAMTCPVGASTYRRSRGQAEVSQASKGPCLHSYFAICGRSQ*YLSSSTPSDQRCSSHKPS 218
HA GAS R S GQ EVS+ASK PCLHS FA CGRS+*YL SS SDQRCSSHKP+
Sbjct: 304 HATIYQGGASACRTS*GQVEVSRASKEPCLHSCFATCGRSR*YLCSSIASDQRCSSHKPN 125
Query: 217 HMHLDQSSEQCVDLKN*DICQNGENSXHRXXXXH*PFH*DQ 95
H H DQSSEQCVDL++* C+NG NS HR H*PFH DQ
Sbjct: 124 HKH*DQSSEQCVDLRS*GTCRNGGNSLHR*TLHH*PFHSDQ 2
Score = 238 bits (514), Expect = 4e-062
Identities = 101/132 (76%), Positives = 114/132 (86%)
Frame = -1 / -2
Query: 582 YLLTQVASTDVRVIILDILGPIWSVLGHC*LQPWLHVPIVMNHSSIVYL*TVNAWVVS*S 403
+LLTQVASTDVRV+IL I P+WSVLGHC LQPWLHVPIVM+ SSIVYL* V+AWVVS*S
Sbjct: 489 HLLTQVASTDVRVVILYIPCPVWSVLGHCQLQPWLHVPIVMSDSSIVYL*AVDAWVVS*S 310
Query: 402 KNMP*LVQWVRQLIEGQEARRKCPKLPKDPVFIHILPFVVDPSNIFLLPLPQIKDVHPIS 223
K+MP ++ VRQL+E EAR KCP+LPK+PVFIH+LP VVDP NIF+LPL QIKDVHPIS
Sbjct: 309 KDMPRFIKGVRQLVERHEARWKCPELPKNPVFIHVLPLVVDPGNIFVLPLLQIKDVHPIS 130
Query: 222 PATCIWIKVPSN 187
P T I IKVPSN
Sbjct: 129 PTTSIRIKVPSN 94
Score = 228 bits (492), Expect = 4e-059
Identities = 119/163 (73%), Positives = 123/163 (75%)
Frame = +2 / +2
Query: 95 LILMERSMXXXXPVXXVFTVLTNILIFQIHTLLGTLIQMHVAGLMG*TSLI*GSGRRKIL 274
LI ME SM PV V TV T+ L QIHTLLGTLI M V GLMG*TSLI* +GR KIL
Sbjct: 2 LI*MEWSMVQCLPVERVSTVSTSTLTSQIHTLLGTLILMLVVGLMG*TSLI*SNGRTKIL 181
Query: 275 LGSTTNGKI*MKTGSFGSLGHFRLAS*PSIS*RTHWTSHGMFLD*DTTQALTVQR*TMLL 454
GSTT+GK *MKTG FGS GHF LAS* S S*RT + GM LD*DTTQA T QR*TMLL
Sbjct: 182 PGSTTSGKT*MKTGFFGSSGHFHLAS*RSTS*RTPLINRGMSLD*DTTQASTAQR*TMLL 361
Query: 455 WFITMGT*SHGWS*Q*PSTDHIGPSISSMITLTSVDAT*VSR* 583
ITMGT*SHGWS Q*PSTDH G I SM TLTSVDAT*VSR*
Sbjct: 362 SLITMGT*SHGWSWQ*PSTDHTGQGI*SMTTLTSVDAT*VSR* 490
>gb|BU969156.1|BU969156 HB10L09r BC Hordeum vulgare subsp. vulgare cDNA clone HB10L09
5-PRIME, mRNA sequence
Length = 684
Score = 346 bits (749), Expect = 1e-094
Identities = 128/162 (79%), Positives = 141/162 (87%)
Frame = +1 / +3
Query: 1 FYLPXVYPKLXXXLFXXXDIVVXXDLTXXWDVDLNGKVNXXXXXCGXSFHRFDKYLNFSN 180
FYLP VYPKL LF DIVV DLT W+VDLNG VN CG SFHRFDKYLNFSN
Sbjct: 198 FYLPQVYPKLNKILFLDDDIVVQKDLTGLWEVDLNGNVNGAVETCGESFHRFDKYLNFSN 377
Query: 181 PHIARNFDPNACGWAYGMNIFDLREWKKKDITGIYHKWQNMNEDRVLWKLGTLPPGLLTF 360
P+I++NFDPNACGWAYGMN+FDL EWKKKDITGIYHKWQNMNE+R+LWKLGTLPPGL+TF
Sbjct: 378 PNISQNFDPNACGWAYGMNMFDLEEWKKKDITGIYHKWQNMNENRLLWKLGTLPPGLMTF 557
Query: 361 YKLTHPLDKSWHVLGLGYNPSIDRSEIDNAAVVHYNGNMKPW 486
YKLTHPLDKSWHVLGLGYNP+++ +EID AAV+HYNGNMKPW
Sbjct: 558 YKLTHPLDKSWHVLGLGYNPTVEHAEIDTAAVIHYNGNMKPW 683
Score = 232 bits (501), Expect = 2e-060
Identities = 104/161 (64%), Positives = 112/161 (69%)
Frame = -2 / -3
Query: 485 HGFMFPL**TTAALSISERSMLGLYPNPRTCHDLSSGCVNL*KVKRPGGSVPSFQRTLSS 306
HGFMFPL* TAA+SIS S +GLYPNP TCHDLS GCV+L*KV RPGGSVPSF +L S
Sbjct: 682 HGFMFPL*WMTAAVSISACSTVGLYPNPSTCHDLSRGCVSL*KVMRPGGSVPSFHSSLFS 503
Query: 305 FIFCHLW*IPVISFFFHSLRSKMFIP*AQPHAFGSKFRAMCGFEXXXXXXXXXXXXPQXX 126
F+FCHLW*IPV+SFFFHS RS +FIP*AQPHA GSKF + GFE P
Sbjct: 502 FMFCHLW*IPVMSFFFHSSRSNIFIP*AQPHALGSKFCEIFGFEKLRYLSNRWKLSPHVS 323
Query: 125 XXXLTFPLRSTSHXXVKSXXTTMSXXXKXXXSNFG*TXGR* 3
TFPLRSTSH VKS TTMS K N G*T GR*
Sbjct: 322 TAPFTFPLRSTSHSPVKSFWTTMSSSRKRILFNLG*TCGR* 200
Score = 153 bits (328), Expect = 2e-036
Identities = 75/161 (46%), Positives = 97/161 (60%)
Frame = +3 / +2
Query: 3 LSPXGLSKVGXXXLPXX*HSCXXXFNXXVGC*S*WKGQXXXXXLWXEFSPF*QIS*FFKS 182
L P LS V P *H F+ +G *S*W+ + +W EF P *Q+ FFK
Sbjct: 200 LPPTSLS*VE*NPFPR**HCGPKGFDWTMGG*S*WECKRCCRNMWGEFPPI*QVPQFFKP 379
Query: 183 THCSEL*SKCMWLGLWDEHL*SEGVEEERYYWDLPQMAKYE*RQGPLEAWDTSAWPLDLL 362
+ +E *S CMWLGLW+E++*S +EEE +YWDLP +A++E*+Q +E DT A D L
Sbjct: 380 KYFTEF*S*CMWLGLWNEYV*SGRMEEEGHYWDLP*VAEHE*KQAAVETGDTPARSHDFL 559
Query: 363 *VDAPTGQVMACSWIRIQPKH*PFRDRQCCCGSLQWEHEAM 485
DAP GQ+MAC+WIR+QP DR LQ +HEAM
Sbjct: 560 QADAPPGQIMACAWIRVQPNCRARGDRHRRRHPLQRKHEAM 682
Score = 139 bits (299), Expect = 2e-032
Identities = 74/162 (45%), Positives = 85/162 (52%)
Frame = -3 / -1
Query: 487 AMASCSHCNEPQQHCLSLNGQCLGCILIQEHAMTCPVGASTYRRSRGQAEVSQASKGPCL 308
AMASC C+ ++ C S + LGC LIQ HAM CP GAS R+S A VS S C
Sbjct: 684 AMASCFRCSG*RRRCRSPRARQLGCTLIQAHAMICPGGASACRKS*DLAGVSPVSTAACF 505
Query: 307 HSYFAICGRSQ*YLSSSTPSDQRCSSHKPSHMHLDQSSEQCVDLKN*DICQNGENSXHRX 128
HS A GRSQ* SSS DQ S HKP+HMH DQ+S + + LKN* CQ G NS H
Sbjct: 504 HSCSATYGRSQ*CPSSSILPDQTYSFHKPNHMH*DQNSVKYLGLKN*GTCQIGGNSPHMF 325
Query: 127 XXXH*PFH*DQHPTXLLNXXXQLCXXXGRXXXPTLDRPXGDR 2
H*DQ P N C G+ T DR G +
Sbjct: 324 LQHRLHSH*DQPPIVQSNPFGPQCHHRGKGFYST*DRLVGGK 199
Score = 139 bits (299), Expect(2) = 1e-033
Identities = 56/97 (57%), Positives = 72/97 (74%)
Frame = -1 / -2
Query: 486 PWLHVPIVMNHSSIVYL*TVNAWVVS*SKNMP*LVQWVRQLIEGQEARRKCPKLPKDPVF 307
PWLHV +V++ V L +++WVV *SK+MP* VQ VRQL+E E R+CP+ P+ PVF
Sbjct: 683 PWLHVSVVVDDGGGVDLRVLDSWVVP*SKHMP*FVQGVRQLVESHETWRECPQFPQQPVF 504
Query: 306 IHILPFVVDPSNIFLLPLPQIKDVHPISPATCIWIKV 196
IH+LP +VDPSN+ LLP QIK +H ISP TCI IK+
Sbjct: 503 IHVLPLMVDPSNVLLLPFFQIKHIHSISPTTCIRIKI 393
Score = 111 bits (238), Expect = 5e-024
Identities = 63/118 (53%), Positives = 72/118 (61%)
Frame = +2 / +1
Query: 134 VXXVFTVLTNILIFQIHTLLGTLIQMHVAGLMG*TSLI*GSGRRKILLGSTTNGKI*MKT 313
V V T LT+ IFQ LI MHV GLM * LI +GRR+ LLGST +G+ *MKT
Sbjct: 331 VGRVSTDLTSTSIFQTQIFHRILILMHVVGLME*ICLIWKNGRRRTLLGSTISGRT*MKT 510
Query: 314 GSFGSLGHFRLAS*PSIS*RTHWTSHGMFLD*DTTQALTVQR*TMLLWFITMGT*SHG 487
G G+ GH R S* S S*RT WT+HGM LD* TTQ + +R T T T*SHG
Sbjct: 511 GCCGNWGHSRQVS*LSTS*RTPWTNHGMCLD*GTTQLSSTRRSTPPPSSTTTET*SHG 684
Score = 24.0 bits (46), Expect(2) = 1e-033
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = -1 / -2
Query: 111 LSIKINIPXXC*IXXHNYVXXXEEXXXQLWIDXXEIE 1
+ IKIN+P I + V E+ QL ID E++
Sbjct: 308 IPIKINLP*SSQILLDHNVIIEEKDFIQLRIDLWEVK 198
>gb|BG345023.1|BG345023 HVSMEg0018F09f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0018F09f, mRNA sequence
Length = 856
Score = 316 bits (684), Expect = 1e-085
Identities = 117/124 (94%), Positives = 122/124 (98%)
Frame = +1 / +1
Query: 211 ACGWAYGMNIFDLREWKKKDITGIYHKWQNMNEDRVLWKLGTLPPGLLTFYKLTHPLDKS 390
ACGWAYGMNIFDL++WK KDITGIYHKWQNMNEDRVLWKLGTLPPGL+TFYKLTHPLDKS
Sbjct: 1 ACGWAYGMNIFDLKQWKNKDITGIYHKWQNMNEDRVLWKLGTLPPGLMTFYKLTHPLDKS 180
Query: 391 WHVLGLGYNPSIDRSEIDNAAVVHYNGNMKPWLELAMTKYRPYWTKYIKYDHPYIRGCNL 570
WHVLGLGYNPSIDRSEIDNAAV HYNGNMKPWLELAMTKYRPYWT+YIKYDHPYIRGCNL
Sbjct: 181 WHVLGLGYNPSIDRSEIDNAAVAHYNGNMKPWLELAMTKYRPYWTRYIKYDHPYIRGCNL 360
Query: 571 SE*I 582
SE*+
Sbjct: 361 SE*M 372
Score = 257 bits (555), Expect = 9e-068
Identities = 110/125 (88%), Positives = 114/125 (91%)
Frame = -2 / -3
Query: 590 STTIYSLKLHPRM*G*SYLIYLVQYGRYLVIASSSHGFMFPL**TTAALSISERSMLGLY 411
S IYSL+LHPRM*G SY IYLVQYGRYLVIASSSHGFMFPL** TAALSISERSMLGLY
Sbjct: 380 SYLIYSLRLHPRM*GWSYFIYLVQYGRYLVIASSSHGFMFPL**ATAALSISERSMLGLY 201
Query: 410 PNPRTCHDLSSGCVNL*KVKRPGGSVPSFQRTLSSFIFCHLW*IPVISFFFHSLRSKMFI 231
P+PRTCHDLS GCV+L* V RPGGSVPSFQRTLSSF+FCHLW*IPVIS FFH RSKMFI
Sbjct: 200 PSPRTCHDLSRGCVSL*NVMRPGGSVPSFQRTLSSFMFCHLW*IPVISLFFHCFRSKMFI 21
Query: 230 P*AQP 216
P*AQP
Sbjct: 20 P*AQP 6
Score = 235 bits (508), Expect = 3e-061
Identities = 94/123 (76%), Positives = 104/123 (84%)
Frame = +3 / +3
Query: 213 MWLGLWDEHL*SEGVEEERYYWDLPQMAKYE*RQGPLEAWDTSAWPLDLL*VDAPTGQVM 392
+WLGLWDEHL*SE +EE+RYY DLPQ+AK+E*RQG LEA DTS WP D+L DAP ++
Sbjct: 3 LWLGLWDEHL*SEAMEEQRYYRDLPQVAKHE*RQGSLEARDTSTWPHDVLQADAPP**IV 182
Query: 393 ACSWIRIQPKH*PFRDRQCCCGSLQWEHEAMAGASNDQVPTILDQVYQV*SPLHPWMQLE 572
AC W RIQPKH P RDRQCCC SLQWEHEAMAGA NDQVPTILD+VY+V* PLHPWMQ E
Sbjct: 183 ACPWTRIQPKHRPLRDRQCCCRSLQWEHEAMAGAGNDQVPTILDKVYKV*PPLHPWMQPE 362
Query: 573 *VD 581
*VD
Sbjct: 363 *VD 371
Score = 224 bits (484), Expect = 5e-058
Identities = 94/123 (76%), Positives = 107/123 (86%)
Frame = -1 / -2
Query: 582 YLLTQVASTDVRVIILDILGPIWSVLGHC*LQPWLHVPIVMNHSSIVYL*TVNAWVVS*S 403
+LLTQVASTDVRV+IL I P+WSVLGHC LQPWLHVPIVM+ SSIVYL* V+AWVVS*S
Sbjct: 372 HLLTQVASTDVRVVILYIPCPVWSVLGHCQLQPWLHVPIVMSDSSIVYL*AVDAWVVS*S 193
Query: 402 KNMP*LVQWVRQLIEGQEARRKCPKLPKDPVFIHILPFVVDPSNIFLLPLPQIKDVHPIS 223
K+MP ++ VRQL+E EAR KCP+LPK+PVFIH+LP VVDP NIF+LPL QIKDVHPIS
Sbjct: 192 KDMPRFIKGVRQLVERHEARWKCPELPKNPVFIHVLPLVVDPGNIFVLPLLQIKDVHPIS 13
Query: 222 PAT 214
P T
Sbjct: 12 PTT 4
Score = 223 bits (482), Expect = 1e-057
Identities = 91/121 (75%), Positives = 98/121 (80%)
Frame = -3 / -1
Query: 577 THSSCIHGCKGDHT*YTWSNMVGTWSLLAPAMASCSHCNEPQQHCLSLNGQCLGCILIQE 398
THS CIHGCKG HT YT S+MVGTWSL APAMASCSHCNE QQHCLSL+G+CLGCIL+Q
Sbjct: 367 THSGCIHGCKGGHTLYTLSSMVGTWSLPAPAMASCSHCNERQQHCLSLSGRCLGCILVQG 188
Query: 397 HAMTCPVGASTYRRSRGQAEVSQASKGPCLHSYFAICGRSQ*YLSSSTPSDQRCSSHKPS 218
HA GAS R S GQ EVS+ASK PCLHS FA CGRS+*YL SS SDQRCSSHKP+
Sbjct: 187 HATIYQGGASACRTS*GQVEVSRASKEPCLHSCFATCGRSR*YLCSSIASDQRCSSHKPN 8
Query: 217 H 215
H
Sbjct: 7 H 5
Score = 188 bits (404), Expect = 6e-047
Identities = 95/123 (77%), Positives = 98/123 (79%)
Frame = +2 / +2
Query: 215 VAGLMG*TSLI*GSGRRKILLGSTTNGKI*MKTGSFGSLGHFRLAS*PSIS*RTHWTSHG 394
V GLMG*TSLI* +GR KIL GSTT+GK *MKTG FGS GHF LAS* S S*RT + G
Sbjct: 5 VVGLMG*TSLI*SNGRTKILPGSTTSGKT*MKTGFFGSSGHFHLAS*RSTS*RTPLINRG 184
Query: 395 MFLD*DTTQALTVQR*TMLLWFITMGT*SHGWS*Q*PSTDHIGPSISSMITLTSVDAT*V 574
M LD*DTTQA T QR*TMLL ITMGT*SHGWS Q*PSTDH G I SM TLTSVDAT*V
Sbjct: 185 MSLD*DTTQASTAQR*TMLLSLITMGT*SHGWSWQ*PSTDHTGQGI*SMTTLTSVDAT*V 364
Query: 575 SR* 583
SR*
Sbjct: 365 SR* 373
>gb|BJ447514.1|BJ447514 BJ447514 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak16a24 5', mRNA sequence
Length = 630
Score = 309 bits (670), Expect = 1e-083
Identities = 112/162 (69%), Positives = 135/162 (83%)
Frame = +1 / +2
Query: 91 DVDLNGKVNXXXXXCGXSFHRFDKYLNFSNPHIARNFDPNACGWAYGMNIFDLREWKKKD 270
DVDL G VN C SFHRFD YLNFS+P I+ NFDP ACGWA+GMN+FDL+EWKK++
Sbjct: 8 DVDLKGMVNGAVETCKESFHRFDTYLNFSHPKISENFDPRACGWAFGMNMFDLKEWKKRN 187
Query: 271 ITGIYHKWQNMNEDRVLWKLGTLPPGLLTFYKLTHPLDKSWHVLGLGYNPSIDRSEIDNA 450
ITGIYH WQN+NEDR LWKLGTLPPGL+TFY LTHPLD +WHVLGLGY+P++D +EI+NA
Sbjct: 188 ITGIYHYWQNLNEDRKLWKLGTLPPGLITFYNLTHPLDHTWHVLGLGYDPAVDIAEIENA 367
Query: 451 AVVHYNGNMKPWLELAMTKYRPYWTKYIKYDHPYIRGCNLSE 576
AVVHYNGN KPWL+LA++KY+ YW+KY+ D +IR C S+
Sbjct: 368 AVVHYNGNYKPWLDLAISKYKAYWSKYVDVDSSHIRHCYASK 493
Score = 142 bits (305), Expect = 3e-033
Identities = 70/119 (58%), Positives = 76/119 (63%)
Frame = -2 / -1
Query: 530 YLVQYGRYLVIASSSHGFMFPL**TTAALSISERSMLGLYPNPRTCHDLSSGCVNL*KVK 351
YL Q YL +A SS G FPL**TTAA SIS S G P P+TC S+GCV L* V
Sbjct: 447 YLDQ*ALYLEMARSSQGL*FPL**TTAAFSISAMSTAGS*PRPKTCQV*SNGCVKL*NVI 268
Query: 350 RPGGSVPSFQRTLSSFIFCHLW*IPVISFFFHSLRSKMFIP*AQPHAFGSKFRAMCGFE 174
PGG+VPSF SSF FC W IPV+ FFHS RS MFIP AQP A GSKF + G E
Sbjct: 267 SPGGNVPSFHNLRSSFKFCQ*WYIPVMFRFFHSFRSNMFIPKAQPQARGSKFSEILGCE 91
Score = 116 bits (248), Expect = 2e-025
Identities = 54/128 (42%), Positives = 83/128 (64%)
Frame = -1 / -3
Query: 579 LLTQVASTDVRVIILDILGPIWSVLGHC*LQPWLHVPIVMNHSSIVYL*TVNAWVVS*SK 400
L VA +V + +DILGP+ VLG+ +QP L +PIV+N+ I+ VN+ +++ ++
Sbjct: 496 LFACVAMPNV*AVNIDILGPVGLVLGNGKVQPGLVIPIVVNYRCILDFSNVNSRIIAKAQ 317
Query: 399 NMP*LVQWVRQLIEGQEARRKCPKLPKDPVFIHILPFVVDPSNIFLLPLPQIKDVHPISP 220
+MP ++QWV Q++E + R C +LP+ + I ILP +V S++ LLPL Q+K VH SP
Sbjct: 316 DMPSVIQWVCQIVECN*SWR*CAQLPQLAILIQILPIMVYSSDVSLLPLLQVKHVHSKSP 137
Query: 219 ATCIWIKV 196
T WIKV
Sbjct: 136 TTSTWIKV 113
Score = 83.5 bits (176), Expect(2) = 9e-021
Identities = 41/103 (39%), Positives = 59/103 (57%)
Frame = +3 / +1
Query: 90 GC*S*WKGQXXXXXLWXEFSPF*QIS*FFKSTHCSEL*SKCMWLGLWDEHL*SEGVEEER 269
GC*S* G+ L +F +S S EL*S C+WLG W+EH+* EGVEE +
Sbjct: 7 GC*S*RDGKWCCRNLQRKFPSLRHLSQLLTS*DL*EL*STCLWLGFWNEHV*PEGVEEAK 186
Query: 270 YYWDLPQMAKYE*RQGPLEAWDTSAWPLDLL*VDAPTGQVMAC 398
++W++P +AK+E* +EA ++ +L D P G +AC
Sbjct: 187 HHWNIPLLAKFE*GSQVVEAGHITSRTNYILQFDTPIGSHLAC 315
Score = 36.8 bits (74), Expect(2) = 9e-021
Identities = 17/39 (43%), Positives = 24/39 (61%)
Frame = +3 / +1
Query: 438 DRQCCCGSLQWEHEAMAGASNDQVPTILDQVYQV*SPLH 554
+R+C SLQWE +A+AG + QV +L QV + * H
Sbjct: 355 NRECSGSSLQWELQALAGPCHFQVQGLLVQVCRC*QLTH 471
>gb|BJ455274.1|BJ455274 BJ455274 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak16a24 3', mRNA sequence
Length = 565
Score = 309 bits (670), Expect = 1e-083
Identities = 112/162 (69%), Positives = 135/162 (83%)
Frame = +1 / -1
Query: 91 DVDLNGKVNXXXXXCGXSFHRFDKYLNFSNPHIARNFDPNACGWAYGMNIFDLREWKKKD 270
DVDL G VN C SFHRFD YLNFS+P I+ NFDP ACGWA+GMN+FDL+EWKK++
Sbjct: 562 DVDLKGMVNGAVETCKESFHRFDTYLNFSHPKISENFDPRACGWAFGMNMFDLKEWKKRN 383
Query: 271 ITGIYHKWQNMNEDRVLWKLGTLPPGLLTFYKLTHPLDKSWHVLGLGYNPSIDRSEIDNA 450
ITGIYH WQN+NEDR LWKLGTLPPGL+TFY LTHPLD +WHVLGLGY+P++D +EI+NA
Sbjct: 382 ITGIYHYWQNLNEDRKLWKLGTLPPGLITFYNLTHPLDHTWHVLGLGYDPAVDIAEIENA 203
Query: 451 AVVHYNGNMKPWLELAMTKYRPYWTKYIKYDHPYIRGCNLSE 576
AVVHYNGN KPWL+LA++KY+ YW+KY+ D +IR C S+
Sbjct: 202 AVVHYNGNYKPWLDLAISKYKAYWSKYVDVDSSHIRHCYASK 77
Score = 142 bits (305), Expect = 3e-033
Identities = 70/119 (58%), Positives = 76/119 (63%)
Frame = -2 / +3
Query: 530 YLVQYGRYLVIASSSHGFMFPL**TTAALSISERSMLGLYPNPRTCHDLSSGCVNL*KVK 351
YL Q YL +A SS G FPL**TTAA SIS S G P P+TC S+GCV L* V
Sbjct: 123 YLDQ*ALYLEMARSSQGL*FPL**TTAAFSISAMSTAGS*PRPKTCQV*SNGCVKL*NVI 302
Query: 350 RPGGSVPSFQRTLSSFIFCHLW*IPVISFFFHSLRSKMFIP*AQPHAFGSKFRAMCGFE 174
PGG+VPSF SSF FC W IPV+ FFHS RS MFIP AQP A GSKF + G E
Sbjct: 303 SPGGNVPSFHNLRSSFKFCQ*WYIPVMFRFFHSFRSNMFIPKAQPQARGSKFSEILGCE 479
Score = 116 bits (248), Expect = 2e-025
Identities = 54/128 (42%), Positives = 83/128 (64%)
Frame = -1 / +2
Query: 579 LLTQVASTDVRVIILDILGPIWSVLGHC*LQPWLHVPIVMNHSSIVYL*TVNAWVVS*SK 400
L VA +V + +DILGP+ VLG+ +QP L +PIV+N+ I+ VN+ +++ ++
Sbjct: 74 LFACVAMPNV*AVNIDILGPVGLVLGNGKVQPGLVIPIVVNYRCILDFSNVNSRIIAKAQ 253
Query: 399 NMP*LVQWVRQLIEGQEARRKCPKLPKDPVFIHILPFVVDPSNIFLLPLPQIKDVHPISP 220
+MP ++QWV Q++E + R C +LP+ + I ILP +V S++ LLPL Q+K VH SP
Sbjct: 254 DMPSVIQWVCQIVECN*SWR*CAQLPQLAILIQILPIMVYSSDVSLLPLLQVKHVHSKSP 433
Query: 219 ATCIWIKV 196
T WIKV
Sbjct: 434 TTSTWIKV 457
Score = 83.5 bits (176), Expect(2) = 9e-021
Identities = 41/103 (39%), Positives = 59/103 (57%)
Frame = +3 / -3
Query: 90 GC*S*WKGQXXXXXLWXEFSPF*QIS*FFKSTHCSEL*SKCMWLGLWDEHL*SEGVEEER 269
GC*S* G+ L +F +S S EL*S C+WLG W+EH+* EGVEE +
Sbjct: 563 GC*S*RDGKWCCRNLQRKFPSLRHLSQLLTS*DL*EL*STCLWLGFWNEHV*PEGVEEAK 384
Query: 270 YYWDLPQMAKYE*RQGPLEAWDTSAWPLDLL*VDAPTGQVMAC 398
++W++P +AK+E* +EA ++ +L D P G +AC
Sbjct: 383 HHWNIPLLAKFE*GSQVVEAGHITSRTNYILQFDTPIGSHLAC 255
Score = 36.8 bits (74), Expect(2) = 9e-021
Identities = 17/39 (43%), Positives = 24/39 (61%)
Frame = +3 / -3
Query: 438 DRQCCCGSLQWEHEAMAGASNDQVPTILDQVYQV*SPLH 554
+R+C SLQWE +A+AG + QV +L QV + * H
Sbjct: 215 NRECSGSSLQWELQALAGPCHFQVQGLLVQVCRC*QLTH 99
>gb|AV916779.1|AV916779 AV916779 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags19j21 5', mRNA sequence
Length = 612
Score = 234 bits (506), Expect(2) = 3e-079
Identities = 82/137 (59%), Positives = 107/137 (78%)
Frame = +1 / +2
Query: 40 LFXXXDIVVXXDLTXXWDVDLNGKVNXXXXXCGXSFHRFDKYLNFSNPHIARNFDPNACG 219
+F D+VV D+T W +D+ GKVN CG SFHRF +YLNFS+P IA+NFDP+ACG
Sbjct: 32 VFLDGDVVVRKDITGLWSIDMKGKVNGAVETCGESFHRFGRYLNFSSPVIAKNFDPDACG 211
Query: 220 WAYGMNIFDLREWKKKDITGIYHKWQNMNEDRVLWKLGTLPPGLLTFYKLTHPLDKSWHV 399
WA+GMN+FDL EW++++IT +YH WQ +NED +LWKLGTLPPGL+TF+ T PLD+SWHV
Sbjct: 212 WAFGMNVFDLAEWRRQNITELYHFWQKLNEDGLLWKLGTLPPGLVTFWNKTFPLDRSWHV 391
Query: 400 LGLGYNPSIDRSEIDNA 450
LGLGYNP + +++ A
Sbjct: 392 LGLGYNPHVSSRDLERA 442
Score = 101 bits (215), Expect(2) = 2e-025
Identities = 47/82 (57%), Positives = 50/82 (60%)
Frame = -2 / -1
Query: 419 GLYPNPRTCHDLSSGCVNL*KVKRPGGSVPSFQRTLSSFIFCHLW*IPVISFFFHSLRSK 240
GL P PRTCHD S G V V RPGG VPSF + SS FC W* V+ HS RS
Sbjct: 411 GL*PRPRTCHDRSRGNVLFQNVTRPGGRVPSFHSSPSSLSFCQKW*SSVMFCRLHSARSN 232
Query: 239 MFIP*AQPHAFGSKFRAMCGFE 174
FIP AQPHA GSKF A+ G E
Sbjct: 231 TFIPKAQPHASGSKFFAITGLE 166
Score = 81.3 bits (171), Expect(2) = 3e-079
Identities = 24/41 (58%), Positives = 35/41 (85%)
Frame = +1 / +3
Query: 451 AVVHYNGNMKPWLELAMTKYRPYWTKYIKYDHPYIRGCNLS 573
AV+HYNGN+KPWLE+ + K+R YW+KY+ YD P++R CN++
Sbjct: 444 AVIHYNGNLKPWLEIGLPKFRSYWSKYLDYDQPFLRECNIN 566
Score = 34.5 bits (69), Expect(2) = 2e-025
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = -3 / -1
Query: 565 CIHGCKGDHT*YTWSNMVGTWSLLAPAMASCSHCN 461
CI K DH+ T ++ GTW + A AS HCN
Sbjct: 558 CIPAEKADHSQGTLTSSFGTWGGQSQARASGCHCN 454
>gb|CA032787.1|CA032787 HX14D07r HX Hordeum vulgare subsp. vulgare cDNA clone HX14D07
5-PRIME, mRNA sequence
Length = 529
Score = 294 bits (637), Expect = 4e-079
Identities = 108/175 (61%), Positives = 130/175 (74%)
Frame = +1 / +2
Query: 40 LFXXXDIVVXXDLTXXWDVDLNGKVNXXXXXCGXSFHRFDKYLNFSNPHIARNFDPNACG 219
LF D+VV DLT W +D++GKVN C SFHR+ +Y+NFS+P I F+PNACG
Sbjct: 5 LFLDDDVVVQRDLTGLWKIDMDGKVNGAVETCFGSFHRYWQYMNFSHPLIKAKFNPNACG 184
Query: 220 WAYGMNIFDLREWKKKDITGIYHKWQNMNEDRVLWKLGTLPPGLLTFYKLTHPLDKSWHV 399
WAYGMN FDL W+++ T YH WQ NE+R+LWKLGTLPPGL+TFY T PLDKSWHV
Sbjct: 185 WAYGMNFFDLNSWRREKSTEQYHYWQTQNENRLLWKLGTLPPGLITFYSTTKPLDKSWHV 364
Query: 400 LGLGYNPSIDRSEIDNAAVVHYNGNMKPWLELAMTKYRPYWTKYIKYDHPYIRGC 564
LGLGYNPSI EI NAAVVH+NGNMKPWL++ M ++R WTKY+ YD +IR C
Sbjct: 365 LGLGYNPSISMEEIRNAAVVHFNGNMKPWLDIGMNQFRQLWTKYVDYDDSFIRQC 529
Score = 119 bits (254), Expect = 3e-026
Identities = 65/130 (50%), Positives = 71/130 (54%)
Frame = -2 / -2
Query: 563 HPRM*G*SYLIYLVQYGRYLVIASSSHGFMFPL**TTAALSISERSMLGLYPNPRTCHDL 384
H RM S Y VQ I SS GF+FPL TTAA IS MLGLYP PRTC DL
Sbjct: 528 H*RMNESS*STYFVQSCLNWFIPISSQGFIFPLKCTTAAFLISSMLMLGLYPRPRTCQDL 349
Query: 383 SSGCVNL*KVKRPGGSVPSFQRTLSSFIFCHLW*IPVISFFFHSLRSKMFIP*AQPHAFG 204
S G V * V PGG+VP+F + SF C W V LRSK F+P*AQPHA G
Sbjct: 348 SRGFVVE*NVINPGGNVPNFHSSRFSF*VCQ*WYCSVDFSLLQELRSKKFMP*AQPHALG 169
Query: 203 SKFRAMCGFE 174
F + G E
Sbjct: 168 LNFALIRGCE 139
>gb|AV922076.1|AV922076 AV922076 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags19j21 3', mRNA sequence
Length = 643
Score = 294 bits (636), Expect = 6e-079
Identities = 99/160 (61%), Positives = 132/160 (82%)
Frame = +1 / -3
Query: 94 VDLNGKVNXXXXXCGXSFHRFDKYLNFSNPHIARNFDPNACGWAYGMNIFDLREWKKKDI 273
+D+ GKVN CG SFHRF +YLNFS+P IA+NFDP+ACGWA+GMN+FDL EW++++I
Sbjct: 638 IDMKGKVNGAVETCGESFHRFGRYLNFSSPVIAKNFDPDACGWAFGMNVFDLAEWRRQNI 459
Query: 274 TGIYHKWQNMNEDRVLWKLGTLPPGLLTFYKLTHPLDKSWHVLGLGYNPSIDRSEIDNAA 453
T +YH WQ +NED +LWKLGTLPPGL+TF+ T PLD+SWHVLGLGYNP + +++ AA
Sbjct: 458 TELYHFWQKLNEDGLLWKLGTLPPGLVTFWNKTFPLDRSWHVLGLGYNPHVSSRDLERAA 279
Query: 454 VVHYNGNMKPWLELAMTKYRPYWTKYIKYDHPYIRGCNLS 573
V+HYNGN+KPWLE+ + K+R YW+KY+ YD P++R CN++
Sbjct: 278 VIHYNGNLKPWLEIGLPKFRSYWSKYLDYDQPFLRECNIN 159
Score = 125 bits (267), Expect = 5e-028
Identities = 70/136 (51%), Positives = 75/136 (55%)
Frame = -2 / +1
Query: 581 IYSLKLHPRM*G*SYLIYLVQYGRYLVIASSSHGFMFPL**TTAALSISERSMLGLYPNP 402
++ L LH R G*S Y Q R L SS GF PL* TAA S S GL P P
Sbjct: 151 LHGLMLHSRRKG*S*SRYFDQ*LRNLGRPISSQGFRLPL*CMTAARSRSLLLTCGL*PRP 330
Query: 401 RTCHDLSSGCVNL*KVKRPGGSVPSFQRTLSSFIFCHLW*IPVISFFFHSLRSKMFIP*A 222
RTCHD S G V V RPGG VPSF + SS FC W* V+ HS RS FIP A
Sbjct: 331 RTCHDRSRGNVLFQNVTRPGGRVPSFHSSPSSLSFCQKW*SSVMFCRLHSARSNTFIPKA 510
Query: 221 QPHAFGSKFRAMCGFE 174
QPHA GSKF A+ G E
Sbjct: 511 QPHASGSKFFAITGLE 558
>gb|CA032293.1|CA032293 HX12J15r HX Hordeum vulgare subsp. vulgare cDNA clone HX12J15
5-PRIME, mRNA sequence
Length = 653
Score = 294 bits (636), Expect = 6e-079
Identities = 99/160 (61%), Positives = 132/160 (82%)
Frame = +1 / -3
Query: 94 VDLNGKVNXXXXXCGXSFHRFDKYLNFSNPHIARNFDPNACGWAYGMNIFDLREWKKKDI 273
+D+ GKVN CG SFHRF +YLNFS+P IA+NFDP+ACGWA+GMN+FDL EW++++I
Sbjct: 651 IDMKGKVNGAVETCGESFHRFGRYLNFSSPVIAKNFDPDACGWAFGMNVFDLAEWRRQNI 472
Query: 274 TGIYHKWQNMNEDRVLWKLGTLPPGLLTFYKLTHPLDKSWHVLGLGYNPSIDRSEIDNAA 453
T +YH WQ +NED +LWKLGTLPPGL+TF+ T PLD+SWHVLGLGYNP + +++ AA
Sbjct: 471 TELYHFWQKLNEDGLLWKLGTLPPGLVTFWNKTFPLDRSWHVLGLGYNPHVSSRDLERAA 292
Query: 454 VVHYNGNMKPWLELAMTKYRPYWTKYIKYDHPYIRGCNLS 573
V+HYNGN+KPWLE+ + K+R YW+KY+ YD P++R CN++
Sbjct: 291 VIHYNGNLKPWLEIGLPKFRSYWSKYLDYDQPFLRECNIN 172
Score = 125 bits (267), Expect = 5e-028
Identities = 70/136 (51%), Positives = 75/136 (55%)
Frame = -2 / +2
Query: 581 IYSLKLHPRM*G*SYLIYLVQYGRYLVIASSSHGFMFPL**TTAALSISERSMLGLYPNP 402
++ L LH R G*S Y Q R L SS GF PL* TAA S S GL P P
Sbjct: 164 LHGLMLHSRRKG*S*SRYFDQ*LRNLGRPISSQGFRLPL*CMTAARSRSLLLTCGL*PRP 343
Query: 401 RTCHDLSSGCVNL*KVKRPGGSVPSFQRTLSSFIFCHLW*IPVISFFFHSLRSKMFIP*A 222
RTCHD S G V V RPGG VPSF + SS FC W* V+ HS RS FIP A
Sbjct: 344 RTCHDRSRGNVLFQNVTRPGGRVPSFHSSPSSLSFCQKW*SSVMFCRLHSARSNTFIPKA 523
Query: 221 QPHAFGSKFRAMCGFE 174
QPHA GSKF A+ G E
Sbjct: 524 QPHASGSKFFAITGLE 571
>gb|BG343589.1|BG343589 HVSMEg0006H13f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0006H13f, mRNA sequence
Length = 1018
Score = 289 bits (625), Expect = 2e-077
Identities = 102/191 (53%), Positives = 138/191 (72%)
Frame = +1 / +1
Query: 1 FYLPXVYPKLXXXLFXXXDIVVXXDLTXXWDVDLNGKVNXXXXXCGXSFHRFDKYLNFSN 180
FYLP +YPKL +F D+VV D+T W +D+ GKVN CG SFHRF +YLNFS+
Sbjct: 160 FYLPEIYPKLDKMVFLDGDVVVRKDITGLWSIDMKGKVNGAVETCGESFHRFGRYLNFSS 339
Query: 181 PHIARNFDPNACGWAYGMNIFDLREWKKKDITGIYHKWQNMNEDRVLWKLGTLPPGLLTF 360
P IA+NFDP+ACGWA+GMN+FDL EW++++IT +YH WQ +NED +LWKLGTLPPGL+TF
Sbjct: 340 PVIAKNFDPDACGWAFGMNVFDLAEWRRQNITELYHFWQKLNEDGLLWKLGTLPPGLVTF 519
Query: 361 YKLTHPLDKSWHVLGLGYNPSIDRSEIDNAAVVHYNGNMKPWLELAMTKYRPYWTKYIKY 540
+ T PLD+SWHVLGLGYNP + +++ AAV+HY G++KPWLE + + +
Sbjct: 520 WNKTFPLDRSWHVLGLGYNPHVSSRDLERAAVIHYXGHLKPWLEXGLPSFEATGQSTLTM 699
Query: 541 DHPYIRGCNLS 573
P + G +++
Sbjct: 700 IXPXLAGMHIN 732
Score = 113 bits (242), Expect(2) = 2e-029
Identities = 58/106 (54%), Positives = 61/106 (57%)
Frame = -2 / -3
Query: 491 SSHGFMFPL**TTAALSISERSMLGLYPNPRTCHDLSSGCVNL*KVKRPGGSVPSFQRTL 312
SS GF P * TAA S S GL P PRTCHD S G V V RPGG VPSF +
Sbjct: 650 SSQGFRCPX*CMTAARSRSLLLTCGL*PRPRTCHDRSXGNVLFQNVTRPGGRVPSFHSSP 471
Query: 311 SSFIFCHLW*IPVISFFFHSLRSKMFIP*AQPHAFGSKFRAMCGFE 174
SS FC W* V+ HS RS FIP AQPHA GSKF A+ G E
Sbjct: 470 SSLSFCQKW*SSVMFCRLHSARSNTFIPKAQPHASGSKFFAITGLE 333
Score = 35.9 bits (72), Expect(2) = 2e-029
Identities = 19/45 (42%), Positives = 21/45 (46%)
Frame = -2 / -3
Query: 137 PQXXXXXLTFPLRSTSHXXVKSXXTTMSXXXKXXXSNFG*TXGR* 3
PQ LTFP S V S TT S K S+FG* G+*
Sbjct: 296 PQVSTAPLTFPFISIDQRPVMSFLTTTSPSRKTILSSFG*ISGK* 162
>gb|AV837092.1|AV837092 AV837092 K. Sato unpublished cDNA library: Hordeum vulgare subsp.
vulgare seedling leaves second leaf stage Hordeum
vulgare subsp. vulgare cDNA clone basd23f10, mRNA
sequence
Length = 643
Score = 280 bits (606), Expect = 8e-075
Identities = 104/111 (93%), Positives = 109/111 (98%)
Frame = +1 / -2
Query: 250 REWKKKDITGIYHKWQNMNEDRVLWKLGTLPPGLLTFYKLTHPLDKSWHVLGLGYNPSID 429
++WK KDITGIYHKWQNMNEDRVLWKLGTLPPGL+TFYKLTHPLDKSWHVLGLGYNPSID
Sbjct: 642 KQWKNKDITGIYHKWQNMNEDRVLWKLGTLPPGLMTFYKLTHPLDKSWHVLGLGYNPSID 463
Query: 430 RSEIDNAAVVHYNGNMKPWLELAMTKYRPYWTKYIKYDHPYIRGCNLSE*I 582
RSEIDNAAV HYNGNMKPWLELAMTKYRPYWT+YIKYDHPYIRGCNLSE*+
Sbjct: 462 RSEIDNAAVAHYNGNMKPWLELAMTKYRPYWTRYIKYDHPYIRGCNLSE*M 310
Score = 233 bits (503), Expect = 1e-060
Identities = 99/112 (88%), Positives = 103/112 (91%)
Frame = -2 / +2
Query: 590 STTIYSLKLHPRM*G*SYLIYLVQYGRYLVIASSSHGFMFPL**TTAALSISERSMLGLY 411
S IYSL+LHPRM*G SY IYLVQYGRYLVIASSSHGFMFPL** TAALSISERSMLGLY
Sbjct: 302 SYLIYSLRLHPRM*GWSYFIYLVQYGRYLVIASSSHGFMFPL**ATAALSISERSMLGLY 481
Query: 410 PNPRTCHDLSSGCVNL*KVKRPGGSVPSFQRTLSSFIFCHLW*IPVISFFFH 255
P+PRTCHDLS GCV+L* V RPGGSVPSFQRTLSSF+FCHLW*IPVIS FFH
Sbjct: 482 PSPRTCHDLSRGCVSL*NVMRPGGSVPSFQRTLSSFMFCHLW*IPVISLFFH 637
Score = 205 bits (442), Expect = 3e-052
Identities = 83/111 (74%), Positives = 92/111 (82%)
Frame = +3 / -1
Query: 249 EGVEEERYYWDLPQMAKYE*RQGPLEAWDTSAWPLDLL*VDAPTGQVMACSWIRIQPKH* 428
E +EE+RYY DLPQ+AK+E*RQG LEA DTS WP D+L DAP ++AC W RIQPKH
Sbjct: 643 EAMEEQRYYRDLPQVAKHE*RQGSLEARDTSTWPHDVLQADAPP**IVACPWTRIQPKHR 464
Query: 429 PFRDRQCCCGSLQWEHEAMAGASNDQVPTILDQVYQV*SPLHPWMQLE*VD 581
P RDRQCCC SLQWEHEAMAGA NDQVPTILD+VY+V* PLHPWMQ E*VD
Sbjct: 463 PLRDRQCCCRSLQWEHEAMAGAGNDQVPTILDKVYKV*PPLHPWMQPE*VD 311
Score = 199 bits (428), Expect = 3e-050
Identities = 83/110 (75%), Positives = 96/110 (87%)
Frame = -1 / +1
Query: 582 YLLTQVASTDVRVIILDILGPIWSVLGHC*LQPWLHVPIVMNHSSIVYL*TVNAWVVS*S 403
+LLTQVASTDVRV+IL I P+WSVLGHC LQPWLHVPIVM+ SSIVYL* V+AWVVS*S
Sbjct: 310 HLLTQVASTDVRVVILYIPCPVWSVLGHCQLQPWLHVPIVMSDSSIVYL*AVDAWVVS*S 489
Query: 402 KNMP*LVQWVRQLIEGQEARRKCPKLPKDPVFIHILPFVVDPSNIFLLPL 253
K+MP ++ VRQL+E EAR KCP+LPK+PVFIH+LP VVDP NIF+LPL
Sbjct: 490 KDMPRFIKGVRQLVERHEARWKCPELPKNPVFIHVLPLVVDPGNIFVLPL 639
Score = 194 bits (418), Expect = 7e-049
Identities = 80/107 (74%), Positives = 86/107 (80%)
Frame = -3 / +3
Query: 577 THSSCIHGCKGDHT*YTWSNMVGTWSLLAPAMASCSHCNEPQQHCLSLNGQCLGCILIQE 398
THS CIHGCKG HT YT S+MVGTWSL APAMASCSHCNE QQHCLSL+G+CLGCIL+Q
Sbjct: 315 THSGCIHGCKGGHTLYTLSSMVGTWSLPAPAMASCSHCNERQQHCLSLSGRCLGCILVQG 494
Query: 397 HAMTCPVGASTYRRSRGQAEVSQASKGPCLHSYFAICGRSQ*YLSSS 257
HA GAS R S GQ EVS+ASK PCLHS FA CGRS+*YL SS
Sbjct: 495 HATIYQGGASACRTS*GQVEVSRASKEPCLHSCFATCGRSR*YLCSS 635
Score = 167 bits (360), Expect = 7e-041
Identities = 84/110 (76%), Positives = 87/110 (79%)
Frame = +2 / -3
Query: 254 SGRRKILLGSTTNGKI*MKTGSFGSLGHFRLAS*PSIS*RTHWTSHGMFLD*DTTQALTV 433
+GR KIL GSTT+GK *MKTG FGS GHF LAS* S S*RT + GM LD*DTTQA T
Sbjct: 638 NGRTKILPGSTTSGKT*MKTGFFGSSGHFHLAS*RSTS*RTPLINRGMSLD*DTTQASTA 459
Query: 434 QR*TMLLWFITMGT*SHGWS*Q*PSTDHIGPSISSMITLTSVDAT*VSR* 583
QR*TMLL ITMGT*SHGWS Q*PSTDH G I SM TLTSVDAT*VSR*
Sbjct: 458 QR*TMLLSLITMGT*SHGWSWQ*PSTDHTGQGI*SMTTLTSVDAT*VSR* 309
>gb|BJ468235.1|BJ468235 BJ468235 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags37m09 3', mRNA sequence
Length = 634
Score = 271 bits (587), Expect = 3e-072
Identities = 102/108 (94%), Positives = 106/108 (98%)
Frame = +1 / -1
Query: 259 KKKDITGIYHKWQNMNEDRVLWKLGTLPPGLLTFYKLTHPLDKSWHVLGLGYNPSIDRSE 438
+ KDITGIYHKWQNMNEDRVLWKLGTLPPGL+TFYKLTHPLDKSWHVLGLGYNPSIDRSE
Sbjct: 631 RTKDITGIYHKWQNMNEDRVLWKLGTLPPGLMTFYKLTHPLDKSWHVLGLGYNPSIDRSE 452
Query: 439 IDNAAVVHYNGNMKPWLELAMTKYRPYWTKYIKYDHPYIRGCNLSE*I 582
IDNAAV HYNGNMKPWLELAMTKYRPYWT+YIKYDHPYIRGCNLSE*+
Sbjct: 451 IDNAAVAHYNGNMKPWLELAMTKYRPYWTRYIKYDHPYIRGCNLSE*M 308
Score = 224 bits (483), Expect = 7e-058
Identities = 96/108 (88%), Positives = 100/108 (92%)
Frame = -2 / +3
Query: 590 STTIYSLKLHPRM*G*SYLIYLVQYGRYLVIASSSHGFMFPL**TTAALSISERSMLGLY 411
S IYSL+LHPRM*G SY IYLVQYGRYLVIASSSHGFMFPL** TAALSISERSMLGLY
Sbjct: 300 SYLIYSLRLHPRM*GWSYFIYLVQYGRYLVIASSSHGFMFPL**ATAALSISERSMLGLY 479
Query: 410 PNPRTCHDLSSGCVNL*KVKRPGGSVPSFQRTLSSFIFCHLW*IPVIS 267
P+PRTCHDLS GCV+L* V RPGGSVPSFQRTLSSF+FCHLW*IPVIS
Sbjct: 480 PSPRTCHDLSRGCVSL*NVMRPGGSVPSFQRTLSSFMFCHLW*IPVIS 623
Score = 198 bits (427), Expect = 4e-050
Identities = 80/108 (74%), Positives = 89/108 (82%)
Frame = +3 / -3
Query: 258 EEERYYWDLPQMAKYE*RQGPLEAWDTSAWPLDLL*VDAPTGQVMACSWIRIQPKH*PFR 437
+ +RYY DLPQ+AK+E*RQG LEA DTS WP D+L DAP ++AC W RIQPKH P R
Sbjct: 632 KNQRYYRDLPQVAKHE*RQGSLEARDTSTWPHDVLQADAPP**IVACPWTRIQPKHRPLR 453
Query: 438 DRQCCCGSLQWEHEAMAGASNDQVPTILDQVYQV*SPLHPWMQLE*VD 581
DRQCCC SLQWEHEAMAGA NDQVPTILD+VY+V* PLHPWMQ E*VD
Sbjct: 452 DRQCCCRSLQWEHEAMAGAGNDQVPTILDKVYKV*PPLHPWMQPE*VD 309
Score = 191 bits (412), Expect = 5e-048
Identities = 80/106 (75%), Positives = 92/106 (86%)
Frame = -1 / +2
Query: 582 YLLTQVASTDVRVIILDILGPIWSVLGHC*LQPWLHVPIVMNHSSIVYL*TVNAWVVS*S 403
+LLTQVASTDVRV+IL I P+WSVLGHC LQPWLHVPIVM+ SSIVYL* V+AWVVS*S
Sbjct: 308 HLLTQVASTDVRVVILYIPCPVWSVLGHCQLQPWLHVPIVMSDSSIVYL*AVDAWVVS*S 487
Query: 402 KNMP*LVQWVRQLIEGQEARRKCPKLPKDPVFIHILPFVVDPSNIF 265
K+MP ++ VRQL+E EAR KCP+LPK+PVFIH+LP VVDP NIF
Sbjct: 488 KDMPRFIKGVRQLVERHEARWKCPELPKNPVFIHVLPLVVDPGNIF 625
Score = 191 bits (411), Expect = 6e-048
Identities = 78/104 (75%), Positives = 84/104 (80%)
Frame = -3 / +1
Query: 577 THSSCIHGCKGDHT*YTWSNMVGTWSLLAPAMASCSHCNEPQQHCLSLNGQCLGCILIQE 398
THS CIHGCKG HT YT S+MVGTWSL APAMASCSHCNE QQHCLSL+G+CLGCIL+Q
Sbjct: 313 THSGCIHGCKGGHTLYTLSSMVGTWSLPAPAMASCSHCNERQQHCLSLSGRCLGCILVQG 492
Query: 397 HAMTCPVGASTYRRSRGQAEVSQASKGPCLHSYFAICGRSQ*YL 266
HA GAS R S GQ EVS+ASK PCLHS FA CGRS+*YL
Sbjct: 493 HATIYQGGASACRTS*GQVEVSRASKEPCLHSCFATCGRSR*YL 624
Score = 162 bits (349), Expect = 2e-039
Identities = 82/106 (77%), Positives = 84/106 (79%)
Frame = +2 / -2
Query: 266 KILLGSTTNGKI*MKTGSFGSLGHFRLAS*PSIS*RTHWTSHGMFLD*DTTQALTVQR*T 445
KIL GSTT+GK *MKTG FGS GHF LAS* S S*RT + GM LD*DTTQA T QR*T
Sbjct: 624 KILPGSTTSGKT*MKTGFFGSSGHFHLAS*RSTS*RTPLINRGMSLD*DTTQASTAQR*T 445
Query: 446 MLLWFITMGT*SHGWS*Q*PSTDHIGPSISSMITLTSVDAT*VSR* 583
MLL ITMGT*SHGWS Q*PSTDH G I SM TLTSVDAT*VSR*
Sbjct: 444 MLLSLITMGT*SHGWSWQ*PSTDHTGQGI*SMTTLTSVDAT*VSR* 307
>gb|BE060385.2|BE060385 HVSMEg0012C17f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0012C17f, mRNA sequence
Length = 785
Score = 252 bits (544), Expect = 3e-066
Identities = 89/142 (62%), Positives = 112/142 (78%)
Frame = +1 / +1
Query: 1 FYLPXVYPKLXXXLFXXXDIVVXXDLTXXWDVDLNGKVNXXXXXCGXSFHRFDKYLNFSN 180
FYLP +YPKL +F D+VV D+T W +D+ GKVN CG SFHRF +YLNFS+
Sbjct: 160 FYLPEIYPKLDKMVFLDGDVVVRKDITGLWSIDMKGKVNGAVETCGESFHRFGRYLNFSS 339
Query: 181 PHIARNFDPNACGWAYGMNIFDLREWKKKDITGIYHKWQNMNEDRVLWKLGTLPPGLLTF 360
P IA+NFDP+ACGWA+GMN+FDL EW++++IT +YH WQ +NED +LWKLGTLPPGL+TF
Sbjct: 340 PVIAKNFDPDACGWAFGMNVFDLAEWRRQNITELYHFWQKLNEDGLLWKLGTLPPGLVTF 519
Query: 361 YKLTHPLDKSWHVLGLGYNPSI 426
+ T PLD+SWHVLGLGYNP +
Sbjct: 520 WNKTFPLDRSWHVLGLGYNPHV 585
Score = 101 bits (215), Expect(2) = 8e-026
Identities = 47/82 (57%), Positives = 50/82 (60%)
Frame = -2 / -1
Query: 419 GLYPNPRTCHDLSSGCVNL*KVKRPGGSVPSFQRTLSSFIFCHLW*IPVISFFFHSLRSK 240
GL P PRTCHD S G V V RPGG VPSF + SS FC W* V+ HS RS
Sbjct: 578 GL*PRPRTCHDRSRGNVLFQNVTRPGGRVPSFHSSPSSLSFCQKW*SSVMFCRLHSARSN 399
Query: 239 MFIP*AQPHAFGSKFRAMCGFE 174
FIP AQPHA GSKF A+ G E
Sbjct: 398 TFIPKAQPHASGSKFFAITGLE 333
Score = 35.9 bits (72), Expect(2) = 8e-026
Identities = 19/45 (42%), Positives = 21/45 (46%)
Frame = -2 / -1
Query: 137 PQXXXXXLTFPLRSTSHXXVKSXXTTMSXXXKXXXSNFG*TXGR* 3
PQ LTFP S V S TT S K S+FG* G+*
Sbjct: 296 PQVSTAPLTFPFISIDQRPVMSFLTTTSPSRKTILSSFG*ISGK* 162
>gb|BM372595.2|BM372595 EBpi05_SQ003_G13_R pistil, 8 DPA, no treatment, cv Optic, EBpi05
Hordeum vulgare subsp. vulgare cDNA clone
EBpi05_SQ003_G13 5', mRNA sequence
Length = 523
Score = 248 bits (536), Expect = 4e-065
Identities = 93/97 (95%), Positives = 96/97 (98%)
Frame = +1 / +2
Query: 292 WQNMNEDRVLWKLGTLPPGLLTFYKLTHPLDKSWHVLGLGYNPSIDRSEIDNAAVVHYNG 471
WQNMNEDRVLWKLGTLPPGL+TFYKLTHPLDKSWHVLGLGYNPSIDRSEIDNAAV HYNG
Sbjct: 2 WQNMNEDRVLWKLGTLPPGLMTFYKLTHPLDKSWHVLGLGYNPSIDRSEIDNAAVAHYNG 181
Query: 472 NMKPWLELAMTKYRPYWTKYIKYDHPYIRGCNLSE*I 582
NMKPWLELAMTKYRPYWT+YIKYDHPYIRGCNLSE*+
Sbjct: 182 NMKPWLELAMTKYRPYWTRYIKYDHPYIRGCNLSE*M 292
Score = 206 bits (444), Expect = 2e-052
Identities = 88/100 (88%), Positives = 92/100 (92%)
Frame = -2 / -2
Query: 590 STTIYSLKLHPRM*G*SYLIYLVQYGRYLVIASSSHGFMFPL**TTAALSISERSMLGLY 411
S IYSL+LHPRM*G SY IYLVQYGRYLVIASSSHGFMFPL** TAALSISERSMLGLY
Sbjct: 300 SYLIYSLRLHPRM*GWSYFIYLVQYGRYLVIASSSHGFMFPL**ATAALSISERSMLGLY 121
Query: 410 PNPRTCHDLSSGCVNL*KVKRPGGSVPSFQRTLSSFIFCH 291
P+PRTCHDLS GCV+L* V RPGGSVPSFQRTLSSF+FCH
Sbjct: 120 PSPRTCHDLSRGCVSL*NVMRPGGSVPSFQRTLSSFMFCH 1
Score = 179 bits (386), Expect = 2e-044
Identities = 73/97 (75%), Positives = 80/97 (82%)
Frame = +3 / +1
Query: 291 MAKYE*RQGPLEAWDTSAWPLDLL*VDAPTGQVMACSWIRIQPKH*PFRDRQCCCGSLQW 470
+AK+E*RQG LEA DTS WP D+L DAP ++AC W RIQPKH P RDRQCCC SLQW
Sbjct: 1 VAKHE*RQGSLEARDTSTWPHDVLQADAPP**IVACPWTRIQPKHRPLRDRQCCCRSLQW 180
Query: 471 EHEAMAGASNDQVPTILDQVYQV*SPLHPWMQLE*VD 581
EHEAMAGA NDQVPTILD+VY+V* PLHPWMQ E*VD
Sbjct: 181 EHEAMAGAGNDQVPTILDKVYKV*PPLHPWMQPE*VD 291
Score = 174 bits (375), Expect = 6e-043
Identities = 71/95 (74%), Positives = 76/95 (80%)
Frame = -3 / -3
Query: 577 THSSCIHGCKGDHT*YTWSNMVGTWSLLAPAMASCSHCNEPQQHCLSLNGQCLGCILIQE 398
THS CIHGCKG HT YT S+MVGTWSL APAMASCSHCNE QQHCLSL+G+CLGCIL+Q
Sbjct: 287 THSGCIHGCKGGHTLYTLSSMVGTWSLPAPAMASCSHCNERQQHCLSLSGRCLGCILVQG 108
Query: 397 HAMTCPVGASTYRRSRGQAEVSQASKGPCLHSYFA 293
HA GAS R S GQ EVS+ASK PCLHS FA
Sbjct: 107 HATIYQGGASACRTS*GQVEVSRASKEPCLHSCFA 3
Score = 174 bits (375), Expect = 6e-043
Identities = 73/97 (75%), Positives = 85/97 (87%)
Frame = -1 / -1
Query: 582 YLLTQVASTDVRVIILDILGPIWSVLGHC*LQPWLHVPIVMNHSSIVYL*TVNAWVVS*S 403
+LLTQVASTDVRV+IL I P+WSVLGHC LQPWLHVPIVM+ SSIVYL* V+AWVVS*S
Sbjct: 292 HLLTQVASTDVRVVILYIPCPVWSVLGHCQLQPWLHVPIVMSDSSIVYL*AVDAWVVS*S 113
Query: 402 KNMP*LVQWVRQLIEGQEARRKCPKLPKDPVFIHILP 292
K+MP ++ VRQL+E EAR KCP+LPK+PVFIH+LP
Sbjct: 112 KDMPRFIKGVRQLVERHEARWKCPELPKNPVFIHVLP 2
Score = 148 bits (318), Expect = 4e-035
Identities = 75/97 (77%), Positives = 76/97 (78%)
Frame = +2 / +3
Query: 293 GKI*MKTGSFGSLGHFRLAS*PSIS*RTHWTSHGMFLD*DTTQALTVQR*TMLLWFITMG 472
GK *MKTG FGS GHF LAS* S S*RT + GM LD*DTTQA T QR*TMLL ITMG
Sbjct: 3 GKT*MKTGFFGSSGHFHLAS*RSTS*RTPLINRGMSLD*DTTQASTAQR*TMLLSLITMG 182
Query: 473 T*SHGWS*Q*PSTDHIGPSISSMITLTSVDAT*VSR* 583
T*SHGWS Q*PSTDH G I SM TLTSVDAT*VSR*
Sbjct: 183 T*SHGWSWQ*PSTDHTGQGI*SMTTLTSVDAT*VSR* 293
>gb|BI956176.1|BI956176 HVSMEm0025O15f Hordeum vulgare green seedling EST library
HVcDNA0014 (Blumeria infected) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEm0025O15f, mRNA sequence
Length = 674
Score = 244 bits (527), Expect = 6e-064
Identities = 92/181 (50%), Positives = 120/181 (66%)
Frame = +1 / +1
Query: 16 VYPKLXXXLFXXXDIVVXXDLTXXWDVDLNGKVNXXXXXCGXSFHRFDKYLNFSNPHIAR 195
+ P L +F D+VV DLT + ++L+G V C SFHR+ K+ FS P I+
Sbjct: 19 ILPNLEKVVFLDDDVVVQKDLTQLFSIELHGNVIGAVETCLESFHRYHKWGGFSQPIISS 198
Query: 196 NFDPNACGWAYGMNIFDLREWKKKDITGIYHKWQNMNEDRVLWKLGTLPPGLLTFYKLTH 375
DP CGWA+GMNIFDL W+K + T +YH WQ N D++LW+ GTLP GLLTFY L
Sbjct: 199 KIDPYTCGWAFGMNIFDLIAWRKANATSLYHYWQEQNADQLLWRTGTLPAGLLTFYGLME 378
Query: 376 PLDKSWHVLGLGYNPSIDRSEIDNAAVVHYNGNMKPWLELAMTKYRPYWTKYIKYDHPYI 555
PLD+ WH+LGLGY+ ID I++AAVVHYNGNMKPWL+LA+ Y+ W + + HP+I
Sbjct: 379 PLDRRWHLLGLGYDVDIDDRLIESAAVVHYNGNMKPWLKLAIHPYKSIWGADVNFSHPHI 558
Query: 556 R 558
R
Sbjct: 559 R 561
Score = 104 bits (222), Expect = 7e-022
Identities = 52/109 (47%), Positives = 63/109 (57%)
Frame = -2 / -1
Query: 500 IASSSHGFMFPL**TTAALSISERSMLGLYPNPRTCHDLSSGCVNL*KVKRPGGSVPSFQ 321
+A+ S GFMFPL* TTAALSI+ SM YP P CH S G + * V+RP GSVP Q
Sbjct: 503 MANFSQGFMFPL*CTTAALSINRSSMSTSYPRPNRCHLRSRGSIRP*NVRRPAGSVPVLQ 324
Query: 320 RTLSSFIFCHLW*IPVISFFFHSLRSKMFIP*AQPHAFGSKFRAMCGFE 174
S+F C * V F ++RS +FIP A P +GS F + G E
Sbjct: 323 SN*SAFCSCQ***SDVAFAFLQAIRSNIFIPKAHPQVYGSIFELIIGCE 177
>gb|BJ549963.1|BJ549963 BJ549963 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags25a14 3', mRNA sequence
Length = 625
Score = 236 bits (509), Expect = 2e-061
Identities = 84/125 (67%), Positives = 99/125 (79%)
Frame = +1 / -3
Query: 199 FDPNACGWAYGMNIFDLREWKKKDITGIYHKWQNMNEDRVLWKLGTLPPGLLTFYKLTHP 378
F+PNACGWAYGMN FDL W+++ T YH WQ NE+R+LWKLGTLPPGL+TFY T P
Sbjct: 614 FNPNACGWAYGMNFFDLNSWRREKSTEQYHYWQTQNENRLLWKLGTLPPGLITFYSTTKP 435
Query: 379 LDKSWHVLGLGYNPSIDRSEIDNAAVVHYNGNMKPWLELAMTKYRPYWTKYIKYDHPYIR 558
LDKSWHVLGLGYNPSI EI NAAVVH+NGNMKPWL++ M ++R WTKY+ YD +IR
Sbjct: 434 LDKSWHVLGLGYNPSISMEEIRNAAVVHFNGNMKPWLDIGMNQFRQLWTKYVDYDDSFIR 255
Query: 559 GCNLS 573
CN +
Sbjct: 254 QCNFA 240
Score = 121 bits (258), Expect = 8e-027
Identities = 65/125 (52%), Positives = 70/125 (56%)
Frame = -2 / +1
Query: 569 KLHPRM*G*SYLIYLVQYGRYLVIASSSHGFMFPL**TTAALSISERSMLGLYPNPRTCH 390
KLH RM S Y VQ I SS GF+FPL TTAA IS MLGLYP PRTC
Sbjct: 244 KLH*RMNESS*STYFVQSCLNWFIPISSQGFIFPLKCTTAAFLISSMLMLGLYPRPRTCQ 423
Query: 389 DLSSGCVNL*KVKRPGGSVPSFQRTLSSFIFCHLW*IPVISFFFHSLRSKMFIP*AQPHA 210
DLS G V * V PGG+VP+F + SF C W V LRSK F+P*AQPHA
Sbjct: 424 DLSRGFVVE*NVINPGGNVPNFHSSRFSF*VCQ*WYCSVDFSLLQELRSKKFMP*AQPHA 603
Query: 209 FGSKF 195
G F
Sbjct: 604 LGLNF 618
>gb|BU968630.1|BU968630 HB08B19r BC Hordeum vulgare subsp. vulgare cDNA clone HB08B19
5-PRIME, mRNA sequence
Length = 521
Score = 186 bits (401), Expect(2) = 3e-061
Identities = 71/93 (76%), Positives = 74/93 (79%)
Frame = +1 / +2
Query: 1 FYLPXVYPKLXXXLFXXXDIVVXXDLTXXWDVDLNGKVNXXXXXCGXSFHRFDKYLNFSN 180
FYLP +YPKL LF DIVV DLT WDVDLNG VN CG SFHRFDKYLNFSN
Sbjct: 167 FYLPQIYPKLDKILFLDDDIVVQKDLTGLWDVDLNGMVNGAVFTCGESFHRFDKYLNFSN 346
Query: 181 PHIARNFDPNACGWAYGMNIFDLREWKKKDITG 279
PHIARNFDPNACGWAYGMNIFDL++WK KDITG
Sbjct: 347 PHIARNFDPNACGWAYGMNIFDLKQWKNKDITG 445
Score = 140 bits (300), Expect(2) = 9e-045
Identities = 58/92 (63%), Positives = 65/92 (70%)
Frame = -3 / -1
Query: 277 Q*YLSSSTPSDQRCSSHKPSHMHLDQSSEQCVDLKN*DICQNGENSXHRXXXXH*PFH*D 98
+*YL SS SDQRCSSHKP+H H DQSSEQCVDL++* C+NG NS HR H*PFH D
Sbjct: 443 R*YLCSSIASDQRCSSHKPNHKH*DQSSEQCVDLRS*GTCRNGGNSLHR*TLHH*PFHSD 264
Query: 97 QHPTXLLNXXXQLCXXXGRXXXPTLDRPXGDR 2
QHPT L N QLC G+ PTLDR GD+
Sbjct: 263 QHPTILSNLSAQLCHHRGKVSYPTLDRSVGDK 168
Score = 137 bits (293), Expect(2) = 5e-040
Identities = 58/91 (63%), Positives = 63/91 (69%)
Frame = +3 / +1
Query: 3 LSPXGLSKVGXXXLPXX*HSCXXXFNXXVGC*S*WKGQXXXXXLWXEFSPF*QIS*FFKS 182
LSP LSKVG P *HSC F+ VGC*S W GQ LW EF PF Q+ * KS
Sbjct: 169 LSPTDLSKVG*DTFPR**HSCAERFDRIVGC*SEWNGQWCSVYLWREFPPFRQVP*LLKS 348
Query: 183 THCSEL*SKCMWLGLWDEHL*SEGVEEERYY 275
THCSEL*S C+WLGLWDEHL*SE +EE+RYY
Sbjct: 349 THCSEL*S*CLWLGLWDEHL*SEAMEEQRYY 441
Score = 119 bits (255), Expect(2) = 5e-036
Identities = 56/92 (60%), Positives = 56/92 (60%)
Frame = -2 / -3
Query: 278 PVISFFFHSLRSKMFIP*AQPHAFGSKFRAMCGFEXXXXXXXXXXXXPQXXXXXLTFPLR 99
PVIS FFH RSKMFIP*AQP A GSKFRAMCGFE PQ LT P R
Sbjct: 444 PVISLFFHCFRSKMFIP*AQPQALGSKFRAMCGFEKLRYLSKRWKLSPQVNTAPLTIPFR 265
Query: 98 STSHXXVKSXXTTMSXXXKXXXSNFG*TXGR* 3
STSH VKS TTMS K SNFG* GR*
Sbjct: 264 STSHNPVKSFCTTMSSSRKSILSNFG*ICGR* 169
Score = 104 bits (222), Expect(2) = 2e-029
Identities = 57/90 (63%), Positives = 59/90 (65%)
Frame = +2 / +3
Query: 5 ISXXSIQSWXXXSSXXXT*LXXXI*QXCGMLILMERSMXXXXPVXXVFTVLTNILIFQIH 184
IS SIQSW S T*L I*Q CGMLI ME SM PV V TV T+ L QIH
Sbjct: 171 ISHRSIQSWIRYFSSMMT*LCRKI*QDCGMLI*MEWSMVQCLPVERVSTVSTSTLTSQIH 350
Query: 185 TLLGTLIQMHVAGLMG*TSLI*GSGRRKIL 274
TLLGTLI M V GLMG*TSLI* +GR KIL
Sbjct: 351 TLLGTLILMLVVGLMG*TSLI*SNGRTKIL 440
Score = 69.3 bits (145), Expect(2) = 3e-061
Identities = 25/32 (78%), Positives = 28/32 (87%)
Frame = +1 / +3
Query: 259 KKKDITGIYHKWQNMNEDRVLWKLGTLPPGLL 354
+ K + IYHKWQNMNEDRVLWKLGTLPPGL+
Sbjct: 426 RTKILPXIYHKWQNMNEDRVLWKLGTLPPGLM 521
Score = 60.6 bits (126), Expect(2) = 9e-045
Identities = 23/24 (95%), Positives = 24/24 (100%)
Frame = -2 / -2
Query: 350 RPGGSVPSFQRTLSSFIFCHLW*I 279
RPGGSVPSFQRTLSSF+FCHLW*I
Sbjct: 517 RPGGSVPSFQRTLSSFMFCHLW*I 446
Score = 57.0 bits (118), Expect(3) = 2e-026
Identities = 24/29 (82%), Positives = 25/29 (86%)
Frame = -1 / -2
Query: 273 NIFLLPLPQIKDVHPISPATCIWIKVPSN 187
NIF+LPL QIKDVHPISP T I IKVPSN
Sbjct: 439 NIFVLPLLQIKDVHPISPTTSIRIKVPSN 353
Score = 51.9 bits (107), Expect(3) = 2e-026
Identities = 23/44 (52%), Positives = 26/44 (59%)
Frame = -1 / -2
Query: 132 GXXXXIDLSIKINIPXXC*IXXHNYVXXXEEXXXQLWIDXXEIE 1
G ID SI+INIP C I HNYV E+ QLWID EI+
Sbjct: 298 GKHCTIDHSIQINIPQSCQIFLHNYVIIEEKYLIQLWIDLWEIK 167
Score = 51.9 bits (107), Expect(2) = 5e-036
Identities = 19/24 (79%), Positives = 22/24 (91%)
Frame = -1 / -1
Query: 351 EARRKCPKLPKDPVFIHILPFVVD 280
EAR KCP+LPK+PVFIH+LP VVD
Sbjct: 518 EARWKCPELPKNPVFIHVLPLVVD 447
Score = 48.3 bits (99), Expect(3) = 2e-026
Identities = 19/24 (79%), Positives = 20/24 (83%)
Frame = -3 / -3
Query: 349 GQAEVSQASKGPCLHSYFAICGRS 278
GQ EVS+ASK PCLHS FA CGRS
Sbjct: 516 GQVEVSRASKEPCLHSCFATCGRS 445
Score = 47.8 bits (98), Expect(2) = 5e-040
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = +3 / +2
Query: 279 DLPQMAKYE*RQGPLEAWDTSAWP 350
DLPQ+AK+E*RQG LEA DTS WP
Sbjct: 446 DLPQVAKHE*RQGSLEARDTSTWP 517
Score = 44.6 bits (91), Expect(2) = 2e-029
Identities = 19/24 (79%), Positives = 20/24 (83%)
Frame = +2 / +1
Query: 281 STTNGKI*MKTGSFGSLGHFRLAS 352
STT+GK *MKTG FGS GHF LAS
Sbjct: 448 STTSGKT*MKTGFFGSSGHFHLAS 519
>gb|BU979822.1|BU979822 HA17H16r HA Hordeum vulgare subsp. vulgare cDNA clone HA17H16
5-PRIME, mRNA sequence
Length = 554
Score = 211 bits (456), Expect = 4e-054
Identities = 80/105 (76%), Positives = 86/105 (81%)
Frame = +1 / +3
Query: 1 FYLPXVYPKLXXXLFXXXDIVVXXDLTXXWDVDLNGKVNXXXXXCGXSFHRFDKYLNFSN 180
FYLP VYPKL LF DIVV DLT W+VDLNG VN CG SFHRFDKYLNFSN
Sbjct: 240 FYLPQVYPKLNKILFLDDDIVVQKDLTGLWEVDLNGNVNGAVETCGESFHRFDKYLNFSN 419
Query: 181 PHIARNFDPNACGWAYGMNIFDLREWKKKDITGIYHKWQNMNEDR 315
P+I++NFDPNACGWAYGMN+FDL EWKKKDITGIYHKWQNMNE+R
Sbjct: 420 PNISQNFDPNACGWAYGMNMFDLEEWKKKDITGIYHKWQNMNENR 554
Score = 133 bits (284), Expect = 2e-030
Identities = 61/104 (58%), Positives = 65/104 (62%)
Frame = -2 / -2
Query: 314 LSSFIFCHLW*IPVISFFFHSLRSKMFIP*AQPHAFGSKFRAMCGFEXXXXXXXXXXXXP 135
L SF+FCHLW*IPV+SFFFHS RS +FIP*AQPHA GSKF + GFE P
Sbjct: 553 LFSFMFCHLW*IPVMSFFFHSSRSNIFIP*AQPHALGSKFCEIFGFEKLRYLSNRWKLSP 374
Query: 134 QXXXXXLTFPLRSTSHXXVKSXXTTMSXXXKXXXSNFG*TXGR* 3
TFPLRSTSH VKS TTMS K N G*T GR*
Sbjct: 373 HVSTAPFTFPLRSTSHSPVKSFWTTMSSSRKRILFNLG*TCGR* 242
>gb|BG417087.1|BG417087 HVSMEk0016D06f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0016D06f, mRNA sequence
Length = 490
Score = 207 bits (447), Expect = 7e-053
Identities = 73/128 (57%), Positives = 95/128 (74%)
Frame = +1 / +3
Query: 181 PHIARNFDPNACGWAYGMNIFDLREWKKKDITGIYHKWQNMNEDRVLWKLGTLPPGLLTF 360
P I+ DP CGWA+GMNIFDL W+K + T +YH WQ N D++LW+ GTLP GLLTF
Sbjct: 6 PIISSKIDPYTCGWAFGMNIFDLIAWRKANATSLYHYWQEQNADQLLWRTGTLPAGLLTF 185
Query: 361 YKLTHPLDKSWHVLGLGYNPSIDRSEIDNAAVVHYNGNMKPWLELAMTKYRPYWTKYIKY 540
Y L PLD+ WH+LGLGY+ ID I++AAVVHYNGNMKPWL+LA+ +Y+ W +++ +
Sbjct: 186 YGLMEPLDRRWHLLGLGYDVDIDDRLIESAAVVHYNGNMKPWLKLAIHRYKSIWERHVNF 365
Query: 541 DHPYIRGC 564
HP+IR C
Sbjct: 366 SHPHIREC 389
Score = 103 bits (220), Expect = 1e-021
Identities = 52/110 (47%), Positives = 63/110 (57%)
Frame = -2 / -1
Query: 509 YLVIASSSHGFMFPL**TTAALSISERSMLGLYPNPRTCHDLSSGCVNL*KVKRPGGSVP 330
Y +A+ S GFMFPL* TTAALSI+ SM YP P CH S G + * V+RP GSVP
Sbjct: 334 YR*MANFSQGFMFPL*CTTAALSINRSSMSTSYPRPNRCHLRSRGSIRP*NVRRPAGSVP 155
Query: 329 SFQRTLSSFIFCHLW*IPVISFFFHSLRSKMFIP*AQPHAFGSKFRAMCG 180
Q S+F C * V F ++RS +FIP A P +GS F + G
Sbjct: 154 VLQSN*SAFCSCQ***SDVAFAFLQAIRSNIFIPKAHPQVYGSIFELIIG 5
>gb|BM443862.2|BM443862 EBem09_SQ001_M07_R embryo, 1 Day germination, no treatment, cv
Optic, EBem09 Hordeum vulgare subsp. vulgare cDNA clone
EBem09_SQ001_M07 5', mRNA sequence
Length = 512
Score = 207 bits (447), Expect = 7e-053
Identities = 77/138 (55%), Positives = 96/138 (69%)
Frame = +1 / +3
Query: 1 FYLPXVYPKLXXXLFXXXDIVVXXDLTXXWDVDLNGKVNXXXXXCGXSFHRFDKYLNFSN 180
FY+P +YP+L +F DIVV DL+ + ++LNG V C +FHRF KYLN S+
Sbjct: 75 FYIPEIYPELHKVVFLDDDIVVQKDLSDLFTINLNGNVMGAVETCMETFHRFHKYLNHSH 254
Query: 181 PHIARNFDPNACGWAYGMNIFDLREWKKKDITGIYHKWQNMNEDRVLWKLGTLPPGLLTF 360
P I +FDP+ACGWA+GMN+ DL EW+ K++TGIYH WQ N D LWKLG+LPPGLL F
Sbjct: 255 PLIRAHFDPDACGWAFGMNVLDLVEWRNKNVTGIYHYWQERNADHTLWKLGSLPPGLLAF 434
Query: 361 YKLTHPLDKSWHVLGLGY 414
Y L L+ WHVLGLGY
Sbjct: 435 YGLVEALNPKWHVLGLGY 488
>gb|AJ432742.1|AJ432742 AJ432742 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200078D03F1, mRNA sequence
Length = 447
Score = 197 bits (424), Expect = 1e-049
Identities = 74/78 (94%), Positives = 77/78 (98%)
Frame = +1 / +1
Query: 349 LLTFYKLTHPLDKSWHVLGLGYNPSIDRSEIDNAAVVHYNGNMKPWLELAMTKYRPYWTK 528
L+TFYKLTHPLDKSWHVLGLGYNPSIDRSEIDNAAV HYNGNMKPWLELAMTKYRPYWT+
Sbjct: 7 LMTFYKLTHPLDKSWHVLGLGYNPSIDRSEIDNAAVAHYNGNMKPWLELAMTKYRPYWTR 186
Query: 529 YIKYDHPYIRGCNLSE*I 582
YIKYDHPYIRGCNLSE*+
Sbjct: 187 YIKYDHPYIRGCNLSE*M 240
Score = 160 bits (343), Expect = 1e-038
Identities = 70/81 (86%), Positives = 73/81 (90%)
Frame = -2 / -2
Query: 590 STTIYSLKLHPRM*G*SYLIYLVQYGRYLVIASSSHGFMFPL**TTAALSISERSMLGLY 411
S IYSL+LHPRM*G SY IYLVQYGRYLVIASSSHGFMFPL** TAALSISERSMLGLY
Sbjct: 248 SYLIYSLRLHPRM*GWSYFIYLVQYGRYLVIASSSHGFMFPL**ATAALSISERSMLGLY 69
Query: 410 PNPRTCHDLSSGCVNL*KVKR 348
P+PRTCHDLS GCV+L* V R
Sbjct: 68 PSPRTCHDLSRGCVSL*NVMR 6
Score = 148 bits (317), Expect = 6e-035
Identities = 59/78 (75%), Positives = 64/78 (82%)
Frame = +3 / +3
Query: 348 PLDLL*VDAPTGQVMACSWIRIQPKH*PFRDRQCCCGSLQWEHEAMAGASNDQVPTILDQ 527
P D+L DAP ++AC W RIQPKH P RDRQCCC SLQWEHEAMAGA NDQVPTILD+
Sbjct: 6 PHDVLQADAPP**IVACPWTRIQPKHRPLRDRQCCCRSLQWEHEAMAGAGNDQVPTILDK 185
Query: 528 VYQV*SPLHPWMQLE*VD 581
VY+V* PLHPWMQ E*VD
Sbjct: 186 VYKV*PPLHPWMQPE*VD 239
Score = 142 bits (305), Expect = 3e-033
Identities = 57/77 (74%), Positives = 61/77 (79%)
Frame = -3 / -3
Query: 577 THSSCIHGCKGDHT*YTWSNMVGTWSLLAPAMASCSHCNEPQQHCLSLNGQCLGCILIQE 398
THS CIHGCKG HT YT S+MVGTWSL APAMASCSHCNE QQHCLSL+G+CLGCIL+Q
Sbjct: 235 THSGCIHGCKGGHTLYTLSSMVGTWSLPAPAMASCSHCNERQQHCLSLSGRCLGCILVQG 56
Query: 397 HAMTCPVGASTYRRSRG 347
HA GAS R S G
Sbjct: 55 HATIYQGGASACRTS*G 5
Score = 136 bits (291), Expect = 2e-031
Identities = 59/79 (74%), Positives = 68/79 (86%)
Frame = -1 / -1
Query: 582 YLLTQVASTDVRVIILDILGPIWSVLGHC*LQPWLHVPIVMNHSSIVYL*TVNAWVVS*S 403
+LLTQVASTDVRV+IL I P+WSVLGHC LQPWLHVPIVM+ SSIVYL* V+AWVVS*S
Sbjct: 240 HLLTQVASTDVRVVILYIPCPVWSVLGHCQLQPWLHVPIVMSDSSIVYL*AVDAWVVS*S 61
Query: 402 KNMP*LVQWVRQLIEGQEA 346
K+MP ++ VRQL+E EA
Sbjct: 60 KDMPRFIKGVRQLVERHEA 4
Score = 117 bits (250), Expect = 1e-025
Identities = 61/79 (77%), Positives = 62/79 (78%)
Frame = +2 / +2
Query: 347 AS*PSIS*RTHWTSHGMFLD*DTTQALTVQR*TMLLWFITMGT*SHGWS*Q*PSTDHIGP 526
AS* S S*RT + GM LD*DTTQA T QR*TMLL ITMGT*SHGWS Q*PSTDH G
Sbjct: 5 AS*RSTS*RTPLINRGMSLD*DTTQASTAQR*TMLLSLITMGT*SHGWSWQ*PSTDHTGQ 184
Query: 527 SISSMITLTSVDAT*VSR* 583
I SM TLTSVDAT*VSR*
Sbjct: 185 GI*SMTTLTSVDAT*VSR* 241
>gb|BJ549178.1|BJ549178 BJ549178 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags25a14 5', mRNA sequence
Length = 606
Score = 193 bits (416), Expect = 1e-048
Identities = 71/121 (58%), Positives = 87/121 (71%)
Frame = +1 / +1
Query: 1 FYLPXVYPKLXXXLFXXXDIVVXXDLTXXWDVDLNGKVNXXXXXCGXSFHRFDKYLNFSN 180
FYLP +YPKL LF D+VV DLT W +D++GKVN C SFHR+ +Y+NFS+
Sbjct: 241 FYLPEMYPKLQKILFLDDDVVVQRDLTGLWKIDMDGKVNGAVETCFGSFHRYWQYMNFSH 420
Query: 181 PHIARNFDPNACGWAYGMNIFDLREWKKKDITGIYHKWQNMNEDRVLWKLGTLPPGLLTF 360
P I F+PNACGWAYGMN FDL W+++ T YH WQ NE+R+LWKLGTLPPGL+TF
Sbjct: 421 PLIKAKFNPNACGWAYGMNFFDLNSWRREKSTEQYHYWQTQNENRLLWKLGTLPPGLITF 600
Query: 361 Y 363
Y
Sbjct: 601 Y 603
>gb|BM444115.1|BM444115 EBem09_SQ004_D08_R embryo, 1 Day germination, no treatment, cv
Optic, EBem09 Hordeum vulgare subsp. vulgare cDNA clone
EBem09_SQ004_D08 5', mRNA sequence
Length = 464
Score = 185 bits (398), Expect = 4e-046
Identities = 69/128 (53%), Positives = 88/128 (68%)
Frame = +1 / +3
Query: 1 FYLPXVYPKLXXXLFXXXDIVVXXDLTXXWDVDLNGKVNXXXXXCGXSFHRFDKYLNFSN 180
FY+P +YP+L +F DIVV DL+ + ++LNG V C +FHRF KYLN S+
Sbjct: 75 FYIPEIYPELHKVVFLDDDIVVQKDLSDLFTINLNGNVMGAVETCMETFHRFHKYLNHSH 254
Query: 181 PHIARNFDPNACGWAYGMNIFDLREWKKKDITGIYHKWQNMNEDRVLWKLGTLPPGLLTF 360
P I +FDP+ACGWA+GMN+ DL EW+ K++TGIYH WQ N D LWKLG+LPPGLL F
Sbjct: 255 PLIRAHFDPDACGWAFGMNVLDLVEWRNKNVTGIYHYWQERNADHTLWKLGSLPPGLLAF 434
Query: 361 YKLTHPLD 384
Y L L+
Sbjct: 435 YGLVEALN 458
>gb|AV931472.1|AV931472 AV931472 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd19o15 3', mRNA sequence
Length = 635
Score = 182 bits (392), Expect = 3e-045
Identities = 60/97 (61%), Positives = 80/97 (82%)
Frame = +1 / -2
Query: 283 YHKWQNMNEDRVLWKLGTLPPGLLTFYKLTHPLDKSWHVLGLGYNPSIDRSEIDNAAVVH 462
YH WQ +NED +LWKLGTLPPGL+TF+ T PLD+SWHVLGLGYNP + +++ AAV+H
Sbjct: 634 YHFWQKLNEDGLLWKLGTLPPGLVTFWNKTFPLDRSWHVLGLGYNPHVSSRDLERAAVIH 455
Query: 463 YNGNMKPWLELAMTKYRPYWTKYIKYDHPYIRGCNLS 573
YNGN+KPWLE+ + K+R YW+KY+ YD P++R CN++
Sbjct: 454 YNGNLKPWLEIGLPKFRSYWSKYLDYDQPFLRECNIN 344
>gb|AV909171.1|AV909171 AV909171 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak11o03 5', mRNA sequence
Length = 586
Score = 181 bits (389), Expect = 7e-045
Identities = 65/94 (69%), Positives = 76/94 (80%)
Frame = +1 / +2
Query: 292 WQNMNEDRVLWKLGTLPPGLLTFYKLTHPLDKSWHVLGLGYNPSIDRSEIDNAAVVHYNG 471
WQ NE+R+LWKLGTLPPGL+TFY T PLDKSWHVLGLGYNPSI EI NAAVVH+NG
Sbjct: 8 WQTQNENRLLWKLGTLPPGLITFYSTTKPLDKSWHVLGLGYNPSISMEEIRNAAVVHFNG 187
Query: 472 NMKPWLELAMTKYRPYWTKYIKYDHPYIRGCNLS 573
NMKPWL++ M ++R WTKY+ YD +IR CN +
Sbjct: 188 NMKPWLDIGMNQFRQLWTKYVDYDDSFIRQCNFA 289
>gb|AV911054.1|AV911054 AV911054 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak11o03 3', mRNA sequence
Length = 527
Score = 181 bits (389), Expect = 7e-045
Identities = 65/94 (69%), Positives = 76/94 (80%)
Frame = +1 / -2
Query: 292 WQNMNEDRVLWKLGTLPPGLLTFYKLTHPLDKSWHVLGLGYNPSIDRSEIDNAAVVHYNG 471
WQ NE+R+LWKLGTLPPGL+TFY T PLDKSWHVLGLGYNPSI EI NAAVVH+NG
Sbjct: 520 WQTQNENRLLWKLGTLPPGLITFYSTTKPLDKSWHVLGLGYNPSISMEEIRNAAVVHFNG 341
Query: 472 NMKPWLELAMTKYRPYWTKYIKYDHPYIRGCNLS 573
NMKPWL++ M ++R WTKY+ YD +IR CN +
Sbjct: 340 NMKPWLDIGMNQFRQLWTKYVDYDDSFIRQCNFA 239
>gb|BJ544949.1|BJ544949 BJ544949 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak41d13 5', mRNA sequence
Length = 589
Score = 181 bits (389), Expect = 7e-045
Identities = 65/94 (69%), Positives = 76/94 (80%)
Frame = +1 / +2
Query: 292 WQNMNEDRVLWKLGTLPPGLLTFYKLTHPLDKSWHVLGLGYNPSIDRSEIDNAAVVHYNG 471
WQ NE+R+LWKLGTLPPGL+TFY T PLDKSWHVLGLGYNPSI EI NAAVVH+NG
Sbjct: 11 WQTQNENRLLWKLGTLPPGLITFYSTTKPLDKSWHVLGLGYNPSISMEEIRNAAVVHFNG 190
Query: 472 NMKPWLELAMTKYRPYWTKYIKYDHPYIRGCNLS 573
NMKPWL++ M ++R WTKY+ YD +IR CN +
Sbjct: 191 NMKPWLDIGMNQFRQLWTKYVDYDDSFIRQCNFA 292
>gb|BJ546433.1|BJ546433 BJ546433 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak41d13 3', mRNA sequence
Length = 525
Score = 181 bits (389), Expect = 7e-045
Identities = 65/94 (69%), Positives = 76/94 (80%)
Frame = +1 / -1
Query: 292 WQNMNEDRVLWKLGTLPPGLLTFYKLTHPLDKSWHVLGLGYNPSIDRSEIDNAAVVHYNG 471
WQ NE+R+LWKLGTLPPGL+TFY T PLDKSWHVLGLGYNPSI EI NAAVVH+NG
Sbjct: 519 WQTQNENRLLWKLGTLPPGLITFYSTTKPLDKSWHVLGLGYNPSISMEEIRNAAVVHFNG 340
Query: 472 NMKPWLELAMTKYRPYWTKYIKYDHPYIRGCNLS 573
NMKPWL++ M ++R WTKY+ YD +IR CN +
Sbjct: 339 NMKPWLDIGMNQFRQLWTKYVDYDDSFIRQCNFA 238
>gb|AV833846.1|AV833846 AV833846 K. Sato unpublished cDNA library: Hordeum vulgare subsp.
vulgare shoots germination Hordeum vulgare subsp.
vulgare cDNA clone bags20p21, mRNA sequence
Length = 494
Score = 100 bits (214), Expect(3) = 9e-044
Identities = 37/74 (50%), Positives = 46/74 (62%)
Frame = +1 / +3
Query: 295 QNMNEDRVLWKLGTLPPGLLTFYKLTHPLDKSWHVLGLGYNPSIDRSEIDNAAVVHYNGN 474
+N+ LWK GTLPP L+ F H +D SWH+LGLGY S D + AAVVHYNG
Sbjct: 183 ENLKAGLTLWKFGTLPPALIAFRGHVHGIDPSWHMLGLGYQESTDIESVKKAAVVHYNGQ 362
Query: 475 MKPWLELAMTKYRP 516
KPWL++A +P
Sbjct: 363 CKPWLDIAFKNLQP 404
Score = 79.4 bits (167), Expect(3) = 9e-044
Identities = 28/52 (53%), Positives = 34/52 (65%)
Frame = +1 / +3
Query: 151 RFDKYLNFSNPHIARNFDPNACGWAYGMNIFDLREWKKKDITGIYHKWQNMN 306
RF Y NFS+P I R+ DP+ C WAYGMN+FDL W+K +I YH W N
Sbjct: 33 RFRTYFNFSHPVIDRSLDPDECAWAYGMNVFDLEAWRKTNIRDTYHFWLKEN 188
Score = 35.4 bits (71), Expect(3) = 9e-044
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +1 / +1
Query: 493 LAMTKYRPYWTKYIKYDHPYIRGCNLSE 576
L + P+WTK++ Y + +IR C++ E
Sbjct: 382 LLLKTCNPFWTKHVNYSNDFIRNCHILE 465
>gb|AL510176.1|AL510176 AL510176 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY04C08u 3',
mRNA sequence
Length = 548
Score = 111 bits (237), Expect(3) = 2e-041
Identities = 40/43 (93%), Positives = 42/43 (97%)
Frame = +1 / -3
Query: 454 VVHYNGNMKPWLELAMTKYRPYWTKYIKYDHPYIRGCNLSE*I 582
V HYNGNMKPWLELAMTKYRPYWT+YIKYDHPYIRGCNLSE*+
Sbjct: 432 VAHYNGNMKPWLELAMTKYRPYWTRYIKYDHPYIRGCNLSE*M 304
Score = 92.7 bits (196), Expect(2) = 3e-027
Identities = 37/43 (86%), Positives = 39/43 (90%)
Frame = +3 / -2
Query: 453 CGSLQWEHEAMAGASNDQVPTILDQVYQV*SPLHPWMQLE*VD 581
C SLQWEHEAMAGA NDQVPTILD+VY+V* PLHPWMQ E*VD
Sbjct: 433 CRSLQWEHEAMAGAGNDQVPTILDKVYKV*PPLHPWMQPE*VD 305
Score = 92.3 bits (195), Expect(2) = 2e-026
Identities = 35/42 (83%), Positives = 36/42 (85%)
Frame = -3 / +3
Query: 577 THSSCIHGCKGDHT*YTWSNMVGTWSLLAPAMASCSHCNEPQ 452
THS CIHGCKG HT YT S+MVGTWSL APAMASCSHCNE Q
Sbjct: 309 THSGCIHGCKGGHTLYTLSSMVGTWSLPAPAMASCSHCNERQ 434
Score = 92.3 bits (195), Expect(2) = 3e-030
Identities = 40/49 (81%), Positives = 44/49 (89%)
Frame = -2 / +2
Query: 590 STTIYSLKLHPRM*G*SYLIYLVQYGRYLVIASSSHGFMFPL**TTAAL 444
S IYSL+LHPRM*G SY IYLVQYGRYLVIASSSHGFMFPL** T+++
Sbjct: 296 SYLIYSLRLHPRM*GWSYFIYLVQYGRYLVIASSSHGFMFPL**ATSSI 442
Score = 84.5 bits (178), Expect(2) = 3e-022
Identities = 34/42 (80%), Positives = 38/42 (90%)
Frame = -1 / +1
Query: 582 YLLTQVASTDVRVIILDILGPIWSVLGHC*LQPWLHVPIVMN 457
+LLTQVASTDVRV+IL I P+WSVLGHC LQPWLHVPIVM+
Sbjct: 304 HLLTQVASTDVRVVILYIPCPVWSVLGHCQLQPWLHVPIVMS 429
Score = 67.5 bits (141), Expect(3) = 2e-041
Identities = 26/26 (100%), Positives = 26/26 (100%)
Frame = +1 / -2
Query: 376 PLDKSWHVLGLGYNPSIDRSEIDNAA 453
PLDKSWHVLGLGYNPSIDRSEIDNAA
Sbjct: 511 PLDKSWHVLGLGYNPSIDRSEIDNAA 434
Score = 60.2 bits (125), Expect(2) = 3e-030
Identities = 24/26 (92%), Positives = 25/26 (96%)
Frame = -2 / +3
Query: 452 AALSISERSMLGLYPNPRTCHDLSSG 375
AALSISERSMLGLYP+PRTCHDLS G
Sbjct: 435 AALSISERSMLGLYPSPRTCHDLSRG 512
Score = 49.6 bits (102), Expect(2) = 3e-027
Identities = 16/22 (72%), Positives = 18/22 (81%)
Frame = +3 / -1
Query: 387 VMACSWIRIQPKH*PFRDRQCC 452
++AC W RIQPKH P RDRQCC
Sbjct: 500 IVACPWTRIQPKHRPLRDRQCC 435
Score = 47.3 bits (97), Expect(2) = 2e-026
Identities = 16/21 (76%), Positives = 20/21 (95%)
Frame = -3 / +1
Query: 454 QQHCLSLNGQCLGCILIQEHA 392
+QHCLSL+G+CLGCIL+Q HA
Sbjct: 433 KQHCLSLSGRCLGCILVQGHA 495
Score = 40.9 bits (83), Expect(2) = 3e-022
Identities = 18/21 (85%), Positives = 20/21 (95%)
Frame = -1 / +2
Query: 453 SSIVYL*TVNAWVVS*SKNMP 391
SSIVYL* V+AWVVS*SK+MP
Sbjct: 434 SSIVYL*AVDAWVVS*SKDMP 496
Score = 29.0 bits (57), Expect(3) = 2e-041
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +1 / -1
Query: 340 PPGLLTFYKLTHP 378
P L+TFYKLTHP
Sbjct: 548 PLALMTFYKLTHP 510
>gb|AV930935.1|AV930935 AV930935 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd25o11 3', mRNA sequence
Length = 495
Score = 168 bits (362), Expect = 4e-041
Identities = 56/90 (62%), Positives = 75/90 (83%)
Frame = +1 / -1
Query: 304 NEDRVLWKLGTLPPGLLTFYKLTHPLDKSWHVLGLGYNPSIDRSEIDNAAVVHYNGNMKP 483
NED +LWKLGTLPPGL+TF+ T PLD+SWHVLGLGYNP + +++ AAV+HYNGN+KP
Sbjct: 495 NEDGLLWKLGTLPPGLVTFWNKTFPLDRSWHVLGLGYNPHVSSRDLERAAVIHYNGNLKP 316
Query: 484 WLELAMTKYRPYWTKYIKYDHPYIRGCNLS 573
WLE+ + K+R YW+KY+ YD P++R CN++
Sbjct: 315 WLEIGLPKFRSYWSKYLDYDQPFLRECNIN 226
>gb|BM444949.1|BM444949 EBem09_SQ006_P20_R embryo, 1 Day germination, no treatment, cv
Optic, EBem09 Hordeum vulgare subsp. vulgare cDNA clone
EBem09_SQ006_P20 5', mRNA sequence
Length = 417
Score = 166 bits (358), Expect = 1e-040
Identities = 61/114 (53%), Positives = 79/114 (69%)
Frame = +1 / +3
Query: 1 FYLPXVYPKLXXXLFXXXDIVVXXDLTXXWDVDLNGKVNXXXXXCGXSFHRFDKYLNFSN 180
FY+P +YP+L +F DIVV DL+ + ++LNG V C +FHRF KYLN S+
Sbjct: 75 FYIPEIYPELHKVVFLDDDIVVQKDLSDLFTINLNGNVMGAVETCMETFHRFHKYLNHSH 254
Query: 181 PHIARNFDPNACGWAYGMNIFDLREWKKKDITGIYHKWQNMNEDRVLWKLGTLP 342
P I +FDP+ACGWA+GMN+ DL EW+ K++TGIYH WQ N D LWKLG+LP
Sbjct: 255 PLIRAHFDPDACGWAFGMNVLDLVEWRNKNVTGIYHYWQERNADHTLWKLGSLP 416
>gb|BJ467937.1|BJ467937 BJ467937 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags30g13 3', mRNA sequence
Length = 703
Score = 113 bits (242), Expect(2) = 1e-040
Identities = 40/63 (63%), Positives = 47/63 (74%)
Frame = +1 / -1
Query: 226 YGMNIFDLREWKKKDITGIYHKWQNMNEDRVLWKLGTLPPGLLTFYKLTHPLDKSWHVLG 405
+GMN+ DL EW+ K++TGIYH WQ N D LWKLG+LPPGLL FY L L+ WHVLG
Sbjct: 703 FGMNVLDLVEWRNKNVTGIYHYWQERNADHTLWKLGSLPPGLLAFYGLVEALNPKWHVLG 524
Query: 406 LGY 414
LGY
Sbjct: 523 LGY 515
Score = 73.0 bits (153), Expect(2) = 1e-040
Identities = 22/48 (45%), Positives = 33/48 (68%)
Frame = +1 / -1
Query: 421 SIDRSEIDNAAVVHYNGNMKPWLELAMTKYRPYWTKYIKYDHPYIRGC 564
++D I AV+HYNGN+KPWL++ M KY+ +W Y+ Y HP ++ C
Sbjct: 511 TVDPDTIKEGAVLHYNGNLKPWLKIGMEKYKGFWDNYVDYSHPLLQRC 368
>gb|CB881764.1|CB881764 HM10N01w HM Hordeum vulgare subsp. vulgare cDNA clone HM10N01
3-PRIME, mRNA sequence
Length = 535
Score = 156 bits (335), Expect = 2e-037
Identities = 57/82 (69%), Positives = 66/82 (80%)
Frame = +1 / -3
Query: 328 LGTLPPGLLTFYKLTHPLDKSWHVLGLGYNPSIDRSEIDNAAVVHYNGNMKPWLELAMTK 507
LGTLPPGL+TFY T PLDKSWHVLGLGYNPSI EI NAAVVH+NGNMKPWL++ M +
Sbjct: 533 LGTLPPGLITFYSTTKPLDKSWHVLGLGYNPSISMEEIRNAAVVHFNGNMKPWLDIGMNQ 354
Query: 508 YRPYWTKYIKYDHPYIRGCNLS 573
+R WTKY+ YD +IR CN +
Sbjct: 353 FRQLWTKYVDYDDSFIRQCNFA 288
>gb|AV833832.1|AV833832 AV833832 K. Sato unpublished cDNA library: Hordeum vulgare subsp.
vulgare shoots germination Hordeum vulgare subsp.
vulgare cDNA clone bags20k03, mRNA sequence
Length = 526
Score = 131 bits (281), Expect(2) = 1e-036
Identities = 52/71 (73%), Positives = 53/71 (74%)
Frame = +1 / +2
Query: 1 FYLPXVYPKLXXXLFXXXDIVVXXDLTXXWDVDLNGKVNXXXXXCGXSFHRFDKYLNFSN 180
FYLP +YPKL LF DIVV DLT WDVDLNG VN CG SFHRFDKYLNFSN
Sbjct: 263 FYLPQIYPKLDKILFLDDDIVVQKDLTGLWDVDLNGMVNGAVFTCGESFHRFDKYLNFSN 442
Query: 181 PHIARNFDPNA 213
PHIARNFDPNA
Sbjct: 443 PHIARNFDPNA 475
Score = 104 bits (222), Expect(2) = 5e-027
Identities = 43/74 (58%), Positives = 49/74 (66%)
Frame = -3 / -3
Query: 223 PSHMHLDQSSEQCVDLKN*DICQNGENSXHRXXXXH*PFH*DQHPTXLLNXXXQLCXXXG 44
P+ H DQSSEQCVDL++* C+NG NS HR H*PFH DQHPT L N QLC G
Sbjct: 485 PTTKH*DQSSEQCVDLRS*GTCRNGGNSLHR*TLHH*PFHSDQHPTILSNLSAQLCHHRG 306
Query: 43 RXXXPTLDRPXGDR 2
+ PTLDR GD+
Sbjct: 305 KVSYPTLDRSVGDK 264
Score = 94.5 bits (200), Expect(2) = 7e-025
Identities = 43/75 (57%), Positives = 47/75 (62%)
Frame = +3 / +1
Query: 3 LSPXGLSKVGXXXLPXX*HSCXXXFNXXVGC*S*WKGQXXXXXLWXEFSPF*QIS*FFKS 182
LSP LSKVG P *HSC F+ VGC*S W GQ LW EF PF Q+ * KS
Sbjct: 265 LSPTDLSKVG*DTFPR**HSCAERFDRIVGC*SEWNGQWCSVYLWREFPPFRQVP*LLKS 444
Query: 183 THCSEL*SKCMWLGL 227
THCSEL*S C+ +GL
Sbjct: 445 THCSEL*S*CLVVGL 489
Score = 41.8 bits (85), Expect(2) = 1e-036
Identities = 13/15 (86%), Positives = 15/15 (100%)
Frame = +1 / +3
Query: 217 GWAYGMNIFDLREWK 261
GWAYGMNIFDL++WK
Sbjct: 480 GWAYGMNIFDLKQWK 524
Score = 39.6 bits (80), Expect(2) = 7e-025
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = +3 / +2
Query: 216 WLGLWDEHL*SEGVEE 263
WLGLWDEHL*SE +EE
Sbjct: 479 WLGLWDEHL*SEAMEE 526
Score = 36.8 bits (74), Expect(2) = 5e-027
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = -3 / -2
Query: 262 SSTPSDQRCSSHKPSHMHL 206
SS SDQRCSSHKP+H L
Sbjct: 525 SSIASDQRCSSHKPNHQAL 469
>gb|BQ460226.1|BQ460226 HA06N23r HA Hordeum vulgare subsp. vulgare cDNA clone HA06N23
5-PRIME, mRNA sequence
Length = 567
Score = 127 bits (271), Expect = 1e-028
Identities = 44/86 (51%), Positives = 58/86 (67%)
Frame = +1 / +2
Query: 319 LWKLGTLPPGLLTFYKLTHPLDKSWHVLGLGYNPSIDRSEIDNAAVVHYNGNMKPWLELA 498
LWK GTLPP L+ F H +D SWH+LGLGY S D + AAVVHYNG KPWL++A
Sbjct: 23 LWKFGTLPPALIAFRGHVHGIDPSWHMLGLGYQESTDIESVKKAAVVHYNGQCKPWLDIA 202
Query: 499 MTKYRPYWTKYIKYDHPYIRGCNLSE 576
+P+WTK++ Y + +IR C++ E
Sbjct: 203 FKNLQPFWTKHVNYSNDFIRNCHILE 280
>gb|BF266558.3|BF266558 HV_CEa0015H07f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0015H07f, mRNA sequence
Length = 767
Score = 101 bits (216), Expect(2) = 5e-028
Identities = 39/74 (52%), Positives = 48/74 (64%)
Frame = +1 / +3
Query: 1 FYLPXVYPKLXXXLFXXXDIVVXXDLTXXWDVDLNGKVNXXXXXCGXSFHRFDKYLNFSN 180
FYLP +YPKL LF D+VV DLT W +D++GKVN C SFHR +Y+NFS+
Sbjct: 447 FYLPEMYPKLQKILFLDDDVVVQRDLTGLWKIDMDGKVNGAVETCFGSFHRDWQYMNFSH 626
Query: 181 PHIARNFDPNACGW 222
P I +PNACGW
Sbjct: 627 PLIKAKVNPNACGW 668
Score = 42.8 bits (87), Expect(2) = 5e-028
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = +1 / +1
Query: 223 AYGMNIFDLREWKKKDITGIYHKWQNMNEDRV 318
AYGM +FDL+ ++ + T YH WQ NE+R+
Sbjct: 670 AYGMKLFDLKS*RRGESTRQYHYWQTQNENRL 765
>gb|BU986456.1|BU986456 HF11O19r HF Hordeum vulgare subsp. vulgare cDNA clone HF11O19
5-PRIME, mRNA sequence
Length = 478
Score = 122 bits (261), Expect = 3e-027
Identities = 45/83 (54%), Positives = 58/83 (69%)
Frame = +1 / +3
Query: 319 LWKLGTLPPGLLTFYKLTHPLDKSWHVLGLGYNPSIDRSEIDNAAVVHYNGNMKPWLELA 498
L LP GL+TFY T PLDKSWHV+GLGYNPSI I AAV+H+NGNMKPWL++A
Sbjct: 27 LGSTSVLPAGLMTFYGNTKPLDKSWHVMGLGYNPSISPEVIRGAAVIHFNGNMKPWLDVA 206
Query: 499 MTKYRPYWTKYIKYDHPYIRGCN 567
+Y+ WTK++ + ++ CN
Sbjct: 207 FNQYKALWTKHVDTEMEFLTLCN 275
>gb|BI777829.2|BI777829 EBro08_SQ002_D17_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ002_D17 5', mRNA sequence
Length = 562
Score = 76.2 bits (160), Expect(2) = 5e-027
Identities = 30/69 (43%), Positives = 40/69 (57%)
Frame = +1 / +2
Query: 1 FYLPXVYPKLXXXLFXXXDIVVXXDLTXXWDVDLNGKVNXXXXXCGXSFHRFDKYLNFSN 180
FY+P + P L +F D+VV DLT + ++L+G V C SFHR+ KYLNFS
Sbjct: 239 FYIPQILPNLEKVVFLDDDVVVQKDLTQLFSIELHGNVIGAVETCLESFHRYHKYLNFSQ 418
Query: 181 PHIARNFDP 207
P I+ DP
Sbjct: 419 PIISSKIDP 445
Score = 65.2 bits (136), Expect(2) = 5e-027
Identities = 21/36 (58%), Positives = 27/36 (75%)
Frame = +1 / +3
Query: 214 CGWAYGMNIFDLREWKKKDITGIYHKWQNMNEDRVL 321
CGWA+GMNIFDL W+K + T +YH WQ N D++L
Sbjct: 453 CGWAFGMNIFDLIAWRKANATSLYHYWQEQNADQLL 560
>gb|CA018769.1|CA018769 HV09J15r HV Hordeum vulgare subsp. vulgare cDNA clone HV09J15
5-PRIME, mRNA sequence
Length = 586
Score = 115 bits (246), Expect = 4e-025
Identities = 44/92 (47%), Positives = 57/92 (61%)
Frame = +1 / +2
Query: 1 FYLPXVYPKLXXXLFXXXDIVVXXDLTXXWDVDLNGKVNXXXXXCGXSFHRFDKYLNFSN 180
FY+P + P L +F D+VV DLT + ++L+G V C SFHR+ KYLNFS
Sbjct: 308 FYIPQILPNLEKVVFLDDDVVVQKDLTQLFSIELHGNVIGAVETCLESFHRYHKYLNFSQ 487
Query: 181 PHIARNFDPNACGWAYGMNIFDLREWKKKDIT 276
P I+ DP CGWA+GMNIFDL W+K + T
Sbjct: 488 PIISSKIDPYTCGWAFGMNIFDLIAWRKANAT 583
>gb|BJ463761.1|BJ463761 BJ463761 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags30g13 5', mRNA sequence
Length = 596
Score = 111 bits (238), Expect = 5e-024
Identities = 42/83 (50%), Positives = 56/83 (67%)
Frame = +1 / +3
Query: 1 FYLPXVYPKLXXXLFXXXDIVVXXDLTXXWDVDLNGKVNXXXXXCGXSFHRFDKYLNFSN 180
FY+P +YP+L +F DIVV DL+ + ++LNG V C +FHRF KYLN S+
Sbjct: 345 FYIPEIYPELHKVVFLDDDIVVQKDLSDLFTINLNGNVMGAVETCMETFHRFHKYLNHSH 524
Query: 181 PHIARNFDPNACGWAYGMNIFDL 249
P I +FDP+ACGWA+GMN+ DL
Sbjct: 525 PLIRAHFDPDACGWAFGMNVLDL 593
>gb|CK124684.1|CK124684 BES1824109p11 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010P119 5-PRIME, mRNA sequence
Length = 787
Score = 76.2 bits (160), Expect(3) = 5e-024
Identities = 31/67 (46%), Positives = 41/67 (61%)
Frame = +1 / +1
Query: 1 FYLPXVYPKLXXXLFXXXDIVVXXDLTXXWDVDLNGKVNXXXXXCGXSFHRFDKYLNFSN 180
FY+P +YP+L LF DIVV DL+ + ++LNG V C +FHRF KYLN S+
Sbjct: 490 FYIPEIYPELHKVLFLDDDIVVQKDLSDLFTINLNGNVMGAVETCMETFHRFHKYLNHSH 669
Query: 181 PHIARNF 201
P I +F
Sbjct: 670 PLIRAHF 690
Score = 49.6 bits (102), Expect(3) = 5e-024
Identities = 15/20 (75%), Positives = 18/20 (90%)
Frame = +1 / +2
Query: 199 FDPNACGWAYGMNIFDLREW 258
FDP+ACGWA+GMN+ DL EW
Sbjct: 689 FDPDACGWAFGMNVLDLXEW 748
Score = 23.1 bits (44), Expect(3) = 5e-024
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1 / +1
Query: 274 TGIYHKWQ 297
TGIYH WQ
Sbjct: 763 TGIYHYWQ 786
>gb|AV834161.1|AV834161 AV834161 K. Sato unpublished cDNA library: Hordeum vulgare subsp.
vulgare shoots germination Hordeum vulgare subsp.
vulgare cDNA clone bags5h22, mRNA sequence
Length = 714
Score = 85.8 bits (181), Expect(2) = 3e-022
Identities = 34/93 (36%), Positives = 53/93 (56%)
Frame = +1 / -1
Query: 295 QNMNEDRVLWKLGTLPPGLLTFYKLTHPLDKSWHVLGLGYNPSIDRSEIDNAAVVHYNGN 474
Q +D V + LL+F L +PLD + GLGY+ ID ++A +HYNGN
Sbjct: 603 QVKKKDEVSLREAAFSLSLLSFQNLIYPLDGRSTLSGLGYDYGIDPEVAQSSAALHYNGN 424
Query: 475 MKPWLELAMTKYRPYWTKYIKYDHPYIRGCNLS 573
MKPWLEL + Y+ YW +++ + ++ CN++
Sbjct: 423 MKPWLELGIPDYKKYWRRFLTREDRFMDECNVN 325
Score = 39.6 bits (80), Expect(2) = 3e-022
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +1 / -1
Query: 199 FDPNACGWAYGMNIFDLREWKKKDITGIY 285
+DP +C W G+N+ +L +W+K +T Y
Sbjct: 705 YDPKSCAWMSGVNVINLDKWRKHKVTENY 619
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 433,806,916
Number of Sequences: 312970
Number of extensions: 6588234
Number of successful extensions: 38542
Number of sequences better than 1.0e-020: 56
length of database: 58,378,179
effective HSP length: 52
effective length of database: 42,103,739
effective search space used: 11368009530
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)