TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QAF30a10.yg.2.1
(1130 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BQ760957.1|BQ760957 EBro03_SQ003_P10_R root, 3 week, wat... 341 2e-095
gb|BE558923.1|BE558923 HV_CEb0020M17f Hordeum vulgare seedl... 199 3e-072
gb|BM101004.2|BM101004 EBpi01_SQ002_J03_R pistil, 1 DPA, no... 216 2e-070
emb|AJ784275.3| Hordeum vulgare subsp. vulgare mRNA for put... 210 1e-063
gb|BE196273.3|BE196273 HVSMEh0091N12f Hordeum vulgare 5-45 ... 139 3e-062
gb|CA029588.1|CA029588 HZ65K08r HZ Hordeum vulgare subsp. v... 150 4e-062
gb|BE214948.1|BE214948 HV_CEb0005F01f Hordeum vulgare seedl... 106 3e-059
gb|AF474072.1| Hordeum vulgare sp. vulgare cultivar Morex B... 116 1e-058
gb|BI948363.1|BI948363 HVSMEl0009E03f Hordeum vulgare spike... 120 3e-058
gb|BJ464341.1|BJ464341 BJ464341 K. Sato unpublished cDNA li... 160 4e-057
dbj|AB109213.1| Hordeum vulgare BRI1 gene for putative bras... 122 9e-057
gb|AW982539.2|AW982539 HVSMEg0003I16f Hordeum vulgare pre-a... 220 1e-056
gb|BG414953.2|BG414953 HVSMEk0004G13f Hordeum vulgare testa... 219 3e-056
gb|CB878333.1|CB878333 HP08C14T HP Hordeum vulgare subsp. v... 107 6e-056
gb|CA032771.1|CA032771 HX14C15r HX Hordeum vulgare subsp. v... 171 6e-056
gb|BG414636.2|BG414636 HVSMEk0003C21f Hordeum vulgare testa... 155 8e-056
gb|BU978248.1|BU978248 HA12N04r HA Hordeum vulgare subsp. v... 121 8e-056
gb|BF261155.2|BF261155 HVSMEf0023O11f Hordeum vulgare seedl... 140 9e-056
dbj|AB109215.1| Hordeum vulgare BRI1 gene for putative bras... 118 1e-055
gb|CB883350.1|CB883350 HQ01P13w HQ Hordeum vulgare subsp. v... 216 1e-055
gb|CA025815.1|CA025815 HZ53D16r HZ Hordeum vulgare subsp. v... 106 2e-055
gb|AV913572.1|AV913572 AV913572 K. Sato unpublished cDNA li... 160 2e-055
gb|CA011695.1|CA011695 HT03E18r HT Hordeum vulgare subsp. v... 128 9e-054
gb|BQ765210.1|BQ765210 EBro03_SQ006_D18_R root, 3 week, wat... 99 2e-052
gb|BJ463669.1|BJ463669 BJ463669 K. Sato unpublished cDNA li... 89 3e-052
gb|AJ427599.1|AJ427599 AJ427599 Hordeum vulgare subsp. vulg... 95 7e-052
gb|BF263242.2|BF263242 HV_CEa0006D16f Hordeum vulgare seedl... 100 1e-051
gb|BF260965.2|BF260965 HVSMEf0023G13f Hordeum vulgare seedl... 139 2e-051
gb|CD663430.1|CD663430 UCRHV18_05bh04_b1 Drought-stressed D... 117 3e-051
gb|BU998735.1|BU998735 HI12A05r HI Hordeum vulgare subsp. v... 108 4e-051
gb|BE060160.1|BE060160 HVSMEg0011B12f Hordeum vulgare pre-a... 149 7e-051
gb|BJ547296.1|BJ547296 BJ547296 K. Sato unpublished cDNA li... 107 1e-050
gb|AY943294.1| Hordeum vulgare subsp. vulgare clone BAC 673... 82 2e-050
gb|CA024753.1|CA024753 HZ50D08r HZ Hordeum vulgare subsp. v... 138 3e-050
gb|BJ547039.1|BJ547039 BJ547039 K. Sato unpublished cDNA li... 107 6e-050
gb|BG369831.1|BG369831 HVSMEi0026D06f Hordeum vulgare 20 DA... 198 6e-050
gb|BM816134.1|BM816134 HC05B11_T3.ab1 HC Hordeum vulgare su... 196 2e-049
gb|BE558296.2|BE558296 HV_CEb0017B21f Hordeum vulgare seedl... 92 2e-049
gb|BU998515.1|BU998515 HI11E21r HI Hordeum vulgare subsp. v... 81 3e-049
gb|BJ469098.1|BJ469098 BJ469098 K. Sato unpublished cDNA li... 116 3e-049
gb|BQ763863.1|BQ763863 EBro03_SQ005_I18_R root, 3 week, wat... 100 7e-049
gb|BJ468873.1|BJ468873 BJ468873 K. Sato unpublished cDNA li... 161 1e-048
gb|BQ465888.1|BQ465888 HU04P13r HU Hordeum vulgare subsp. v... 126 1e-048
gb|BF260967.2|BF260967 HVSMEf0023G15f Hordeum vulgare seedl... 132 5e-048
gb|BF260669.2|BF260669 HVSMEf0022K01f Hordeum vulgare seedl... 99 9e-048
gb|CA031139.1|CA031139 HX09C02r HX Hordeum vulgare subsp. v... 126 2e-047
gb|BM376497.2|BM376497 EBem05_SQ002_G09_R embryo, 14 DPA, n... 128 5e-047
emb|AJ630116.2| Hordeum vulgare subsp. vulgare mRNA for Lys... 144 6e-047
gb|BJ462905.1|BJ462905 BJ462905 K. Sato unpublished cDNA li... 84 8e-047
gb|BM372170.2|BM372170 EBro03_SQ004_D12_R root, 3 week, wat... 122 3e-046
gb|BI960328.1|BI960328 HVSMEn0024D23f Hordeum vulgare rachi... 105 4e-046
gb|BF617106.3|BF617106 HVSMEc0014J24f Hordeum vulgare seedl... 108 1e-045
gb|AL504994.1|AL504994 AL504994 Hordeum vulgare Barke roots... 183 2e-045
gb|BI959898.1|BI959898 HVSMEn0022E20f Hordeum vulgare rachi... 109 4e-045
gb|CA011685.1|CA011685 HT03E08r HT Hordeum vulgare subsp. v... 122 5e-045
gb|AV836502.1|AV836502 AV836502 K. Sato unpublished cDNA li... 181 6e-045
gb|BI953871.1|BI953871 HVSMEm0015C01f Hordeum vulgare green... 101 6e-045
gb|BM372335.2|BM372335 EBro03_SQ004_K20_R root, 3 week, wat... 180 1e-044
gb|CA031182.1|CA031182 HX09D22r HX Hordeum vulgare subsp. v... 131 2e-044
gb|CK123279.1|CK123279 BES1824103c15 BES1824 Hordeum vulgar... 103 2e-043
gb|BF258327.3|BF258327 HVSMEf0015G22f Hordeum vulgare seedl... 167 3e-043
gb|BE060551.2|BE060551 HVSMEg0012J19f Hordeum vulgare pre-a... 88 4e-043
gb|BJ450092.1|BJ450092 BJ450092 K. Sato unpublished cDNA li... 91 6e-043
gb|BI777999.2|BI777999 EBro07_SQ001_M06_R root, 3 week, red... 151 8e-043
gb|AV833754.1|AV833754 AV833754 K. Sato unpublished cDNA li... 115 3e-042
gb|BU985927.1|BU985927 HF09B02r HF Hordeum vulgare subsp. v... 146 4e-042
gb|AV916932.1|AV916932 AV916932 K. Sato unpublished cDNA li... 171 9e-042
gb|BF254175.2|BF254175 HVSMEf0003D17f Hordeum vulgare seedl... 78 1e-041
gb|BG366077.2|BG366077 HVSMEi0005C13f Hordeum vulgare 20 DA... 130 1e-041
gb|BF618611.2|BF618611 HVSMEc0006K17f Hordeum vulgare seedl... 72 2e-041
gb|CA018896.1|CA018896 HV09P14r HV Hordeum vulgare subsp. v... 115 3e-041
gb|CA032262.1|CA032262 HX12I03r HX Hordeum vulgare subsp. v... 84 3e-041
gb|BU972150.1|BU972150 HB20M05r BC Hordeum vulgare subsp. v... 147 4e-041
gb|BQ462615.1|BQ462615 HI01H17T HI Hordeum vulgare subsp. v... 132 4e-041
gb|CA025597.1|CA025597 HZ52J19r HZ Hordeum vulgare subsp. v... 99 6e-041
gb|BG367673.1|BG367673 HVSMEi0013D04f Hordeum vulgare 20 DA... 88 1e-040
gb|BE215415.2|BE215415 HV_CEb0006L19f Hordeum vulgare seedl... 80 1e-040
gb|BF621944.2|BF621944 HVSMEa0001F16f Hordeum vulgare seedl... 96 1e-040
gb|AV910535.1|AV910535 AV910535 K. Sato unpublished cDNA li... 103 1e-040
gb|AV932635.1|AV932635 AV932635 K. Sato unpublished cDNA li... 107 2e-040
gb|BQ465859.1|BQ465859 HU04O06r HU Hordeum vulgare subsp. v... 120 2e-040
gb|CA003517.1|CA003517 HS14L18r HS Hordeum vulgare subsp. v... 166 3e-040
gb|BM816713.1|BM816713 HC114E03_SK.ab1 HC Hordeum vulgare s... 95 5e-040
gb|CK123771.1|CK123771 BES1824105f02 BES1824 Hordeum vulgar... 83 7e-040
gb|BE216768.2|BE216768 HV_CEb0011I04f Hordeum vulgare seedl... 99 8e-040
gb|BI776309.2|BI776309 EBem04_SQ001_I07_R embryo, 12 DPA, n... 139 8e-040
gb|BJ471569.1|BJ471569 BJ471569 K. Sato unpublished cDNA li... 116 1e-039
gb|CA003661.1|CA003661 HS15C23r HS Hordeum vulgare subsp. v... 162 3e-039
gb|AV923555.1|AV923555 AV923555 K. Sato unpublished cDNA li... 149 4e-039
gb|AV917322.1|AV917322 AV917322 K. Sato unpublished cDNA li... 161 5e-039
gb|BJ465430.1|BJ465430 BJ465430 K. Sato unpublished cDNA li... 92 6e-039
gb|BQ756172.1|BQ756172 EBem05_SQ002_G10_R embryo, 14 DPA, n... 109 6e-039
gb|CA020283.1|CA020283 HV14N17r HV Hordeum vulgare subsp. v... 124 8e-039
gb|BF256991.2|BF256991 HVSMEf0011J01f Hordeum vulgare seedl... 84 8e-039
gb|BU971791.1|BU971791 HB19L01r BC Hordeum vulgare subsp. v... 147 2e-038
gb|BU988481.1|BU988481 HF17M10r HF Hordeum vulgare subsp. v... 126 3e-038
gb|AV916201.1|AV916201 AV916201 K. Sato unpublished cDNA li... 86 3e-038
gb|BU993932.1|BU993932 HM05A09r HM Hordeum vulgare subsp. v... 108 4e-038
gb|BI954170.1|BI954170 HVSMEm0016H15f Hordeum vulgare green... 90 4e-038
gb|BG300180.2|BG300180 HVSMEb0010M14f Hordeum vulgare seedl... 121 5e-038
gb|BQ762476.1|BQ762476 EBro01_SQ005_P23 _R root, 3 week, hy... 91 7e-038
gb|BQ465158.1|BQ465158 HU02N02r HU Hordeum vulgare subsp. v... 71 7e-038
gb|BF261904.2|BF261904 HV_CEa0002I16f Hordeum vulgare seedl... 113 1e-037
gb|AL504416.1|AL504416 AL504416 Hordeum vulgare Barke roots... 79 1e-037
gb|CD663034.1|CD663034 UCRHV18_04ac05_b1 Drought-stressed D... 156 2e-037
gb|BF264460.2|BF264460 HV_CEa0009H19f Hordeum vulgare seedl... 83 2e-037
gb|BF260175.2|BF260175 HVSMEf0021E22f Hordeum vulgare seedl... 67 3e-037
gb|BQ470244.1|BQ470244 HX02D24r HX Hordeum vulgare subsp. v... 72 1e-036
gb|AF085167.1|AF085167 Hordeum vulgare receptor-like kinase... 78 2e-036
gb|BI954047.1|BI954047 HVSMEm0015P18f Hordeum vulgare green... 102 2e-036
gb|BE438069.1|BE438069 SFR010.E06F990519 ITEC SFR Barley Le... 105 2e-036
gb|BF624846.2|BF624846 HVSMEa0017O11f Hordeum vulgare seedl... 127 2e-036
gb|AV924450.1|AV924450 AV924450 K. Sato unpublished cDNA li... 113 2e-036
gb|BU970982.1|BU970982 HB16E06r BC Hordeum vulgare subsp. v... 79 3e-036
gb|BI948692.1|BI948692 HVSMEl0010I13f Hordeum vulgare spike... 73 4e-036
gb|BI959357.1|BI959357 HVSMEn0019F17f Hordeum vulgare rachi... 79 4e-036
gb|BI779034.2|BI779034 EBro01_SQ002_K16_R root, 3 week, hyd... 116 4e-036
gb|BG415111.1|BG415111 HVSMEk0005D06f Hordeum vulgare testa... 121 4e-036
gb|BQ470048.1|BQ470048 HX01J23T HX Hordeum vulgare subsp. v... 151 5e-036
gb|BF266592.2|BF266592 HV_CEa0015I18f Hordeum vulgare seedl... 151 7e-036
gb|CB877039.1|CB877039 HP03F15T HP Hordeum vulgare subsp. v... 70 7e-036
gb|CA023741.1|CA023741 HZ47E09r HZ Hordeum vulgare subsp. v... 105 8e-036
gb|AF085166.1|AF085166 Hordeum vulgare receptor-like kinase... 78 1e-035
gb|BU987697.1|BU987697 HF15I03r HF Hordeum vulgare subsp. v... 70 1e-035
gb|BF629255.2|BF629255 HVSMEb0010I11f Hordeum vulgare seedl... 116 2e-035
gb|BE231106.2|BE231106 HVSMEg0016L07f Hordeum vulgare pre-a... 123 3e-035
gb|BG415671.2|BG415671 HVSMEk0007G10f Hordeum vulgare testa... 83 3e-035
gb|AL510469.1|AL510469 AL510469 Hordeum vulgare Barke devel... 78 4e-035
gb|CB877449.1|CB877449 HP04P08T HP Hordeum vulgare subsp. v... 113 4e-035
gb|AV924319.1|AV924319 AV924319 K. Sato unpublished cDNA li... 100 7e-035
gb|BJ453536.1|BJ453536 BJ453536 K. Sato unpublished cDNA li... 100 7e-035
gb|AV917399.1|AV917399 AV917399 K. Sato unpublished cDNA li... 70 9e-035
gb|CA008493.1|CA008493 HU11C07r HU Hordeum vulgare subsp. v... 90 2e-034
gb|AV924320.1|AV924320 AV924320 K. Sato unpublished cDNA li... 99 2e-034
gb|DQ352178.1| Hordeum vulgare subsp. vulgare rust resistan... 56 3e-034
gb|BQ463260.1|BQ463260 HI04J01r HI Hordeum vulgare subsp. v... 130 3e-034
gb|BG310192.1|BG310192 HVSMEc0016G18f Hordeum vulgare seedl... 109 6e-034
gb|BJ464089.1|BJ464089 BJ464089 K. Sato unpublished cDNA li... 105 6e-034
gb|BM817316.1|BM817316 HC108A09_SK.ab1 HC Hordeum vulgare s... 80 1e-033
gb|BI951471.1|BI951471 HVSMEm0001A20f Hordeum vulgare green... 75 1e-033
gb|BI951840.1|BI951840 HVSMEm0003C19f Hordeum vulgare green... 101 1e-033
gb|AV922839.1|AV922839 AV922839 K. Sato unpublished cDNA li... 126 1e-033
gb|AL504999.1|AL504999 AL504999 Hordeum vulgare Barke roots... 144 1e-033
gb|BF264094.2|BF264094 HV_CEa0008I06f Hordeum vulgare seedl... 144 1e-033
gb|AF509747.1| Hordeum vulgare subsp. vulgare stem rust res... 76 1e-033
gb|BI950270.1|BI950270 HVSMEl0020A18f Hordeum vulgare spike... 104 2e-033
gb|AV914493.1|AV914493 AV914493 K. Sato unpublished cDNA li... 76 2e-033
gb|BQ764108.1|BQ764108 EBro03_SQ006_E12_R root, 3 week, wat... 84 2e-033
gb|BU977391.1|BU977391 HA11F10r HA Hordeum vulgare subsp. v... 85 2e-033
gb|BF254320.2|BF254320 HVSMEf0003K06f Hordeum vulgare seedl... 67 3e-033
gb|BM097640.2|BM097640 EBem04_SQ002_E16_R embryo, 12 DPA, n... 92 3e-033
gb|BI952975.1|BI952975 HVSMEm0008M21f Hordeum vulgare green... 114 3e-033
gb|BQ763144.1|BQ763144 EBro02_SQ007_I08_R root, 3 week, hyd... 99 3e-033
gb|BJ452203.1|BJ452203 BJ452203 K. Sato unpublished cDNA li... 84 4e-033
gb|CA003563.1|CA003563 HS14N23r HS Hordeum vulgare subsp. v... 141 8e-033
gb|CA030901.1|CA030901 HX08H10r HX Hordeum vulgare subsp. v... 141 8e-033
gb|AL450804.1|AL450804 AL450804 Hordeum vulgare Barke etiol... 73 9e-033
gb|CA007248.1|CA007248 HU07E16r HU Hordeum vulgare subsp. v... 120 1e-032
gb|BF256987.2|BF256987 HVSMEf0011I21f Hordeum vulgare seedl... 140 1e-032
gb|BU997574.1|BU997574 HI08G06r HI Hordeum vulgare subsp. v... 108 1e-032
gb|BJ447611.1|BJ447611 BJ447611 K. Sato unpublished cDNA li... 140 2e-032
gb|BJ462781.1|BJ462781 BJ462781 K. Sato unpublished cDNA li... 83 3e-032
gb|CA025499.1|CA025499 HZ52F11r HZ Hordeum vulgare subsp. v... 67 3e-032
gb|CA024864.1|CA024864 HZ50I13r HZ Hordeum vulgare subsp. v... 138 4e-032
gb|AV913334.1|AV913334 AV913334 K. Sato unpublished cDNA li... 116 5e-032
gb|BQ458306.1|BQ458306 HA05J18r HA Hordeum vulgare subsp. v... 73 6e-032
gb|BF065248.2|BF065248 HV_CEb0024K03f Hordeum vulgare seedl... 120 7e-032
gb|BU999028.1|BU999028 HI12P05r HI Hordeum vulgare subsp. v... 60 9e-032
gb|CA008423.1|CA008423 HU10O17r HU Hordeum vulgare subsp. v... 122 1e-031
gb|BQ764974.1|BQ764974 EBca01_SQ005_M12_R carpel, pre-anthe... 70 1e-031
gb|BQ462635.1|BQ462635 HI01I17T HI Hordeum vulgare subsp. v... 122 2e-031
gb|BG367446.2|BG367446 HVSMEi0012E18f Hordeum vulgare 20 DA... 136 3e-031
gb|CA021794.1|CA021794 HZ41C07r HZ Hordeum vulgare subsp. v... 136 3e-031
gb|CA012601.1|CA012601 HT05O08r HT Hordeum vulgare subsp. v... 121 6e-031
gb|AV925996.1|AV925996 AV925996 K. Sato unpublished cDNA li... 68 8e-031
gb|BJ463668.1|BJ463668 BJ463668 K. Sato unpublished cDNA li... 89 9e-031
gb|CA019561.1|CA019561 HV12G05r HV Hordeum vulgare subsp. v... 81 9e-031
gb|CA024475.1|CA024475 HZ49G15r HZ Hordeum vulgare subsp. v... 91 1e-030
gb|BU998388.1|BU998388 HI10O10r HI Hordeum vulgare subsp. v... 108 1e-030
gb|BQ765118.1|BQ765118 EBca01_SQ005_H24_R carpel, pre-anthe... 64 1e-030
gb|BQ758677.1|BQ758677 EBma07_SQ002_B13_R maternal, 21 DPA,... 132 3e-030
gb|DW474948.1|DW474948 25-u184 Subtracted libraries from ep... 77 4e-030
gb|AV833420.1|AV833420 AV833420 K. Sato unpublished cDNA li... 83 4e-030
gb|BU995030.1|BU995030 HM08P15r HM Hordeum vulgare subsp. v... 131 6e-030
gb|BE216563.3|BE216563 HV_CEb0010N06f Hordeum vulgare seedl... 118 8e-030
gb|BF621513.3|BF621513 HVSMEa0011D21f Hordeum vulgare seedl... 131 9e-030
gb|AL503407.1|AL503407 AL503407 Hordeum vulgare Barke roots... 101 1e-029
gb|BU989313.1|BU989313 HF21G08r HF Hordeum vulgare subsp. v... 124 1e-029
gb|AL505939.1|AL505939 AL505939 Hordeum vulgare Barke roots... 101 1e-029
gb|BG344214.1|BG344214 HVSMEg0008C18f Hordeum vulgare pre-a... 130 1e-029
gb|BU980696.1|BU980696 HA21G18r HA Hordeum vulgare subsp. v... 130 1e-029
gb|BU980799.1|BU980799 HA21L17r HA Hordeum vulgare subsp. v... 130 1e-029
gb|AV832722.1|AV832722 AV832722 K. Sato unpublished cDNA li... 90 1e-029
gb|CB879642.1|CB879642 HP03C03w HP Hordeum vulgare subsp. v... 75 1e-029
gb|BQ765045.1|BQ765045 EBca01_SQ005_K17_R carpel, pre-anthe... 92 3e-029
gb|BG367458.2|BG367458 HVSMEi0012F10f Hordeum vulgare 20 DA... 128 4e-029
gb|CA008979.1|CA008979 HU12M06r HU Hordeum vulgare subsp. v... 128 4e-029
gb|BJ471768.1|BJ471768 BJ471768 K. Sato unpublished cDNA li... 76 4e-029
gb|BI953631.1|BI953631 HVSMEm0013K08f Hordeum vulgare green... 80 5e-029
gb|BF622870.2|BF622870 HVSMEa0009K17f Hordeum vulgare seedl... 128 6e-029
gb|BQ767938.1|BQ767938 EBro08_SQ010_B11_R root, 3 week, dro... 79 7e-029
gb|BF266815.2|BF266815 HV_CEa0016C07f Hordeum vulgare seedl... 77 7e-029
gb|CA023853.1|CA023853 HZ47J17r HZ Hordeum vulgare subsp. v... 89 7e-029
gb|CD662706.1|CD662706 UCRHV18_02dd10_b1 Drought-stressed D... 127 8e-029
gb|BQ765999.1|BQ765999 EBro03_SQ008_C19_R root, 3 week, wat... 67 8e-029
gb|BG415428.1|BG415428 HVSMEk0006H13f Hordeum vulgare testa... 61 1e-028
gb|AV836503.1|AV836503 AV836503 K. Sato unpublished cDNA li... 75 2e-028
gb|BF266777.2|BF266777 HV_CEa0016A13f Hordeum vulgare seedl... 126 2e-028
gb|CA014211.1|CA014211 HT10L08r HT Hordeum vulgare subsp. v... 126 2e-028
gb|AV836427.1|AV836427 AV836427 K. Sato unpublished cDNA li... 107 2e-028
gb|BF263464.2|BF263464 HV_CEa0006N01f Hordeum vulgare seedl... 61 2e-028
gb|CK125548.1|CK125548 BES1824109a10 BES1824 Hordeum vulgar... 73 3e-028
gb|AV836461.1|AV836461 AV836461 K. Sato unpublished cDNA li... 93 3e-028
gb|CA024256.1|CA024256 HZ48M21r HZ Hordeum vulgare subsp. v... 79 3e-028
gb|BJ452111.1|BJ452111 BJ452111 K. Sato unpublished cDNA li... 82 5e-028
gb|AU252264.1|AU252264 AU252264 salt-stressed barley root c... 85 5e-028
gb|AF085164.1|AF085164 Hordeum vulgare receptor-like kinase... 76 7e-028
gb|BQ464358.1|BQ464358 HF02A21r HF Hordeum vulgare subsp. v... 79 1e-027
gb|BI949494.1|BI949494 HVSMEl0014E01f Hordeum vulgare spike... 76 1e-027
gb|BM096708.2|BM096708 EBma07_SQ001_E18_R maternal, 21 DPA,... 123 1e-027
gb|BQ768749.1|BQ768749 EBro08_SQ012_G15_R root, 3 week, dro... 74 1e-027
gb|AV924449.1|AV924449 AV924449 K. Sato unpublished cDNA li... 113 2e-027
gb|BU987088.1|BU987088 HF13M08r HF Hordeum vulgare subsp. v... 66 2e-027
gb|CA008272.1|CA008272 HU10H03r HU Hordeum vulgare subsp. v... 71 2e-027
gb|AV934084.1|AV934084 AV934084 K. Sato unpublished cDNA li... 123 2e-027
gb|BQ760382.1|BQ760382 EBro01_SQ002_H14_R root, 3 week, hyd... 123 2e-027
gb|BE216031.3|BE216031 HV_CEb0009C21f Hordeum vulgare seedl... 79 3e-027
gb|BE194495.3|BE194495 HVSMEh0085M10f Hordeum vulgare 5-45 ... 81 4e-027
gb|AV836675.1|AV836675 AV836675 K. Sato unpublished cDNA li... 100 4e-027
gb|CA029558.1|CA029558 HZ65J01r HZ Hordeum vulgare subsp. v... 121 7e-027
gb|BU967283.1|BU967283 HB03N04r BC Hordeum vulgare subsp. v... 80 8e-027
gb|AF509759.1| Hordeum vulgare subsp. vulgare Wisconsin 38 ... 66 1e-026
gb|AF509757.1| Hordeum vulgare subsp. vulgare Steptoe Rpg1 ... 66 1e-026
gb|AF509758.1| Hordeum vulgare subsp. vulgare Lion Rpg1 pse... 66 1e-026
gb|AF509760.1| Hordeum vulgare subsp. vulgare Moravian III ... 66 1e-026
gb|BQ760867.1|BQ760867 EBro03_SQ003_L05_R root, 3 week, wat... 84 1e-026
gb|BM817172.1|BM817172 HC112C06_T3.ab1 HC Hordeum vulgare s... 61 1e-026
gb|AV836244.1|AV836244 AV836244 K. Sato unpublished cDNA li... 54 1e-026
gb|BG367586.2|BG367586 HVSMEi0012M21f Hordeum vulgare 20 DA... 81 1e-026
gb|BU986612.1|BU986612 HF12G11r HF Hordeum vulgare subsp. v... 82 1e-026
gb|BI958203.1|BI958203 HVSMEn0013N15f Hordeum vulgare rachi... 66 2e-026
gb|CA006745.1|CA006745 HU05J12r HU Hordeum vulgare subsp. v... 120 2e-026
gb|AF509755.1| Hordeum vulgare subsp. vulgare Kindred barle... 65 2e-026
gb|AF509756.1| Hordeum vulgare subsp. vulgare Peatland barl... 65 2e-026
gb|AF509750.1| Hordeum vulgare subsp. vulgare Q21861 barley... 65 2e-026
gb|AF509753.1| Hordeum vulgare subsp. vulgare Chevron barle... 65 2e-026
gb|AF509751.1| Hordeum vulgare subsp. vulgare 80-TT barley ... 65 2e-026
gb|AF509752.1| Hordeum vulgare subsp. vulgare Bowman barley... 65 2e-026
gb|AF509754.1| Hordeum vulgare subsp. vulgare Leger barley ... 65 2e-026
gb|BU971659.1|BU971659 HB19E12r BC Hordeum vulgare subsp. v... 71 2e-026
gb|BU966755.1|BU966755 HB02E05r BC Hordeum vulgare subsp. v... 80 3e-026
gb|BI778695.2|BI778695 EBro01_SQ001_C01_R root, 3 week, hyd... 68 3e-026
gb|AV927561.1|AV927561 AV927561 K. Sato unpublished cDNA li... 69 3e-026
gb|BU983256.1|BU983256 HA29B10r HA Hordeum vulgare subsp. v... 118 5e-026
gb|AV916577.1|AV916577 AV916577 K. Sato unpublished cDNA li... 115 7e-026
gb|BQ754339.1|BQ754339 EBca01_SQ003_K05_R carpel, pre-anthe... 58 8e-026
gb|BF258404.2|BF258404 HVSMEf0015K04f Hordeum vulgare seedl... 64 8e-026
gb|BU971391.1|BU971391 HB17H15r BC Hordeum vulgare subsp. v... 117 1e-025
gb|AF509762.1| Hordeum vulgare subsp. vulgare Sm89010 Rpg1 ... 65 1e-025
gb|AF509763.1| Hordeum vulgare subsp. vulgare Dictoo Rpg1 p... 65 1e-025
gb|AF509764.1| Hordeum vulgare subsp. vulgare Gobernadora R... 65 1e-025
gb|BJ474992.1|BJ474992 BJ474992 K. Sato unpublished cDNA li... 86 2e-025
gb|BF620215.2|BF620215 HVSMEc0019A20f Hordeum vulgare seedl... 70 2e-025
gb|CA008446.1|CA008446 HU10P21r HU Hordeum vulgare subsp. v... 80 2e-025
gb|AY115550.1| Hordeum vulgare subsp. vulgare stem rust res... 47 2e-025
gb|CB877022.1|CB877022 HP03E15T HP Hordeum vulgare subsp. v... 115 6e-025
gb|CB878070.1|CB878070 HP07D18T HP Hordeum vulgare subsp. v... 115 6e-025
gb|BM443172.2|BM443172 EBro02_SQ002_O12_R root, 3 week, hyd... 114 8e-025
gb|BQ762573.1|BQ762573 EBro02_SQ004_G12_R root, 3 week, hyd... 79 8e-025
gb|BI780740.2|BI780740 EBes01_SQ002_A07_R embryo sac, 4-6 D... 80 2e-024
gb|AW983189.3|AW983189 HVSMEg0008J16f Hordeum vulgare pre-a... 86 2e-024
gb|BM370583.2|BM370583 EBro08_SQ004_K14_R root, 3 week, dro... 79 2e-024
gb|BF629671.2|BF629671 HVSMEb0013B13f Hordeum vulgare seedl... 112 3e-024
gb|BI952328.1|BI952328 HVSMEm0005P11f Hordeum vulgare green... 112 3e-024
gb|BU986512.1|BU986512 HF12B10r HF Hordeum vulgare subsp. v... 72 3e-024
gb|BG366053.1|BG366053 HVSMEi0005A08f Hordeum vulgare 20 DA... 75 3e-024
gb|BQ753651.1|BQ753651 EBan01_SQ004_N18_R anther, yellow st... 63 3e-024
gb|BM816135.1|BM816135 HC05B12_T3.ab1 HC Hordeum vulgare su... 112 4e-024
gb|AV833368.1|AV833368 AV833368 K. Sato unpublished cDNA li... 69 6e-024
gb|BE195366.3|BE195366 HVSMEh0089A15f Hordeum vulgare 5-45 ... 107 8e-024
gb|CA032147.1|CA032147 HX12C13r HX Hordeum vulgare subsp. v... 73 8e-024
gb|CA013507.1|CA013507 HT08K21r HT Hordeum vulgare subsp. v... 88 8e-024
gb|BG414353.2|BG414353 HVSMEk0001M01f Hordeum vulgare testa... 111 1e-023
gb|CA007682.1|CA007682 HU08L06r HU Hordeum vulgare subsp. v... 111 1e-023
gb|BI950173.1|BI950173 HVSMEl0019E06f Hordeum vulgare spike... 71 1e-023
gb|BE558792.2|BE558792 HV_CEb0020G08f Hordeum vulgare seedl... 75 1e-023
gb|BQ468445.1|BQ468445 HM01E10T HM Hordeum vulgare subsp. v... 110 2e-023
gb|BQ468646.1|BQ468646 HM01N21T HM Hordeum vulgare subsp. v... 110 2e-023
gb|CA003770.1|CA003770 HS15I05r HS Hordeum vulgare subsp. v... 110 2e-023
gb|BQ763504.1|BQ763504 EBro02_SQ008_H13_R root, 3 week, hyd... 59 2e-023
gb|AF509748.1| Hordeum vulgare subsp. vulgare Morex barley ... 65 2e-023
gb|BI958688.1|BI958688 HVSMEn0016D19f Hordeum vulgare rachi... 88 3e-023
gb|BM441777.2|BM441777 EBed07_SQ001_I12_R endosperm, 28 DPA... 109 4e-023
gb|BQ470916.1|BQ470916 HX04G21r HX Hordeum vulgare subsp. v... 73 4e-023
gb|BF259744.2|BF259744 HVSMEf0020C09f Hordeum vulgare seedl... 83 4e-023
gb|BQ765808.1|BQ765808 EBro03_SQ008_A09_R root, 3 week, wat... 67 5e-023
gb|BI954135.1|BI954135 HVSMEm0016F13f Hordeum vulgare green... 108 7e-023
gb|BQ471893.1|BQ471893 HV03M19r HV Hordeum vulgare subsp. v... 108 7e-023
gb|CA023468.1|CA023468 HZ46F12r HZ Hordeum vulgare subsp. v... 108 7e-023
gb|CA032915.1|CA032915 HX14J05r HX Hordeum vulgare subsp. v... 108 7e-023
gb|CA004587.1|CA004587 HS18B03r HS Hordeum vulgare subsp. v... 80 7e-023
gb|AV832457.1|AV832457 AV832457 K. Sato unpublished cDNA li... 77 7e-023
gb|AV929413.1|AV929413 AV929413 K. Sato unpublished cDNA li... 68 9e-023
gb|BJ447136.1|BJ447136 BJ447136 K. Sato unpublished cDNA li... 70 9e-023
gb|BJ446879.1|BJ446879 BJ446879 K. Sato unpublished cDNA li... 70 9e-023
gb|BQ766503.1|BQ766503 EBro08_SQ006_D08_R root, 3 week, dro... 84 9e-023
gb|BF628144.2|BF628144 HVSMEb0003E02f Hordeum vulgare seedl... 78 9e-023
gb|CK123889.1|CK123889 BES1824105o22 BES1824 Hordeum vulgar... 84 1e-022
gb|CA012493.1|CA012493 HT05J08r HT Hordeum vulgare subsp. v... 71 1e-022
gb|BM376541.2|BM376541 EBem05_SQ002_I09_R embryo, 14 DPA, n... 73 1e-022
gb|AL504247.1|AL504247 AL504247 Hordeum vulgare Barke roots... 49 2e-022
gb|AV915640.1|AV915640 AV915640 K. Sato unpublished cDNA li... 75 2e-022
gb|CV056781.1|CV056781 BNEL20e4 Barley EST endosperm librar... 68 2e-022
gb|BJ462433.1|BJ462433 BJ462433 K. Sato unpublished cDNA li... 76 2e-022
gb|BQ458876.1|BQ458876 HA02P12r HA Hordeum vulgare subsp. v... 106 2e-022
gb|CW512175.1|CW512175 ToNAR_Steptoe_99c Steptoe Exon trapp... 56 3e-022
gb|CK123885.1|CK123885 BES1824105o18 BES1824 Hordeum vulgar... 48 3e-022
gb|BF621569.1|BF621569 HVSMEa0011H08f Hordeum vulgare seedl... 103 3e-022
gb|AU252280.1|AU252280 AU252280 salt-stressed barley root c... 105 3e-022
gb|BJ455194.1|BJ455194 BJ455194 K. Sato unpublished cDNA li... 66 4e-022
gb|BQ762799.1|BQ762799 EBro02_SQ006_J05_R root, 3 week, hyd... 84 4e-022
gb|BU973230.1|BU973230 HB24D05r BC Hordeum vulgare subsp. v... 105 5e-022
gb|CA015361.1|CA015361 HT14B04r HT Hordeum vulgare subsp. v... 92 6e-022
gb|BU989127.1|BU989127 HF19O04r HF Hordeum vulgare subsp. v... 54 8e-022
gb|BF623663.2|BF623663 HVSMEa0003I08f Hordeum vulgare seedl... 104 9e-022
gb|BF257919.2|BF257919 HVSMEf0014D21f Hordeum vulgare seedl... 104 9e-022
gb|BI948344.1|BI948344 HVSMEl0009B19f Hordeum vulgare spike... 54 1e-021
gb|BF629141.2|BF629141 HVSMEb0010B01f Hordeum vulgare seedl... 70 1e-021
gb|BM374081.2|BM374081 EBma03_SQ003_J12_R maternal, 8 DPA, ... 67 1e-021
gb|BF622369.2|BF622369 HVSMEa0004A07f Hordeum vulgare seedl... 104 1e-021
gb|BU984997.1|BU984997 HF05N06r HF Hordeum vulgare subsp. v... 52 1e-021
gb|BU984123.1|BU984123 HF03A23r HF Hordeum vulgare subsp. v... 52 1e-021
gb|BE603119.2|BE603119 HVSMEh0102B06f Hordeum vulgare 5-45 ... 69 2e-021
gb|CA017355.1|CA017355 HV12L19u HV Hordeum vulgare subsp. v... 64 2e-021
gb|BG417526.1|BG417526 HVSMEk0017O24f Hordeum vulgare testa... 103 2e-021
gb|BU981915.1|BU981915 HA24P22r HA Hordeum vulgare subsp. v... 63 2e-021
gb|BF629357.2|BF629357 HVSMEb0010P10f Hordeum vulgare seedl... 52 2e-021
gb|AV926340.1|AV926340 AV926340 K. Sato unpublished cDNA li... 103 2e-021
gb|BE558194.2|BE558194 HV_CEb0015B10f Hordeum vulgare seedl... 74 3e-021
gb|DQ351213.1| Hordeum vulgare subsp. vulgare resistance pr... 47 3e-021
gb|CA014046.1|CA014046 HT10D18r HT Hordeum vulgare subsp. v... 64 4e-021
gb|BQ464898.1|BQ464898 HU02B07r HU Hordeum vulgare subsp. v... 102 4e-021
gb|BQ660686.1|BQ660686 HI04O18u HI Hordeum vulgare subsp. v... 82 5e-021
gb|BQ463066.1|BQ463066 HI02O21r HI Hordeum vulgare subsp. v... 82 5e-021
gb|BQ463348.1|BQ463348 HI04O18r HI Hordeum vulgare subsp. v... 82 5e-021
gb|BQ660511.1|BQ660511 HI02O21u HI Hordeum vulgare subsp. v... 82 5e-021
gb|BF259873.2|BF259873 HVSMEf0020H24f Hordeum vulgare seedl... 62 5e-021
gb|BI954090.1|BI954090 HVSMEm0016C09f Hordeum vulgare green... 101 8e-021
>gb|BQ760957.1|BQ760957 EBro03_SQ003_P10_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ003_P10 5', mRNA sequence
Length = 592
Score = 341 bits (738), Expect(2) = 2e-095
Identities = 138/175 (78%), Positives = 156/175 (89%)
Frame = +3 / +1
Query: 372 QLSETSRQGKKEFVAEIETISRVQHRNLVKLFGFCLEGNKPLLVYEYMESGSLDKALFGN 551
QLSE S QGK+EF EIETISRVQHRNLVKL+G CLEGNKPLLVYEY+E+GSLD ALFG
Sbjct: 13 QLSEASHQGKREFATEIETISRVQHRNLVKLYGCCLEGNKPLLVYEYLENGSLDHALFGK 192
Query: 552 GRLNLNWSTRYKICLGIARGLAYLHEESSIRIVHRDIKASNVLLDATLNPKISDFGLAKL 731
+L W TR++ICL +ARGL+YLHEES I +VHRDIKASN+LLDA LNPKISDFGLAKL
Sbjct: 193 RGSSLYWPTRFEICLSVARGLSYLHEESIIPVVHRDIKASNILLDANLNPKISDFGLAKL 372
Query: 732 YDDKKTHVSTKVAGTFGYLSPEYAMRGHMTEKVDIFAFGVVMLEIIAGRPNYDGK 896
YDD+KTHVSTKVAGTFGYL+PEYAMRGHMTEK+D+FAFGVV+LE ++GRPNY K
Sbjct: 373 YDDQKTHVSTKVAGTFGYLAPEYAMRGHMTEKIDVFAFGVVVLETLSGRPNYSTK 537
Score = 265 bits (573), Expect = 3e-070
Identities = 123/178 (69%), Positives = 135/178 (75%)
Frame = -2 / -3
Query: 904 WSSLPS*FGLPAIISNMTTPKAKISTFSVM*PLMAYSGER*PNVPATFVLTCVFLSS*SL 725
+SS *FGLP +SN TTP A S FSV+ PLMAYSG R*PNVPAT VLTCVF SS*SL
Sbjct: 545 FSSFVL*FGLPDKVSNTTTPNANTSIFSVIWPLMAYSGAR*PNVPATLVLTCVFWSS*SL 366
Query: 724 ASPKSEILGFKVASSNTLLAFMSLCTMRMLDSSWR*AKPLAIPKHILYRVDQFKFNLPFP 545
ASPKSEILG ++ASS LLAFMSLCT M+DSS R* +PLA KHI RV Q++ + P
Sbjct: 365 ASPKSEILGLRLASSKILLAFMSLCTTGMIDSS*R*ERPLATLKHISKRVGQYRLDPLLP 186
Query: 544 NNALSRLPLSMYS*TKSGLFPSRQKPNNFTRLRCCTREIVSISATNSFFPWRDVSDSC 371
N A SRLP S YS*T SGL PSRQ+P NFTRLRCCTR+IVSIS NS FP D SDSC
Sbjct: 185 NRAWSRLPFSRYS*TSSGLLPSRQQPYNFTRLRCCTRDIVSISVANSLFP**DASDSC 12
Score = 216 bits (466), Expect = 2e-055
Identities = 91/163 (55%), Positives = 121/163 (74%)
Frame = -1 / -2
Query: 866 NLQHDHTKSKNINFLSHVTSHGVLR*KIAKCTSNFCANMCLFIVIKFGEPEIRNLRVQSG 687
+LQ+ + K+++ LSH+ SHG+LR +IAKCTS+F A+MCL ++IKFGEP++R+LR++ G
Sbjct: 507 SLQYYDPECKHVDLLSHMASHGILRCEIAKCTSHFGAHMCLLVIIKFGEPKVRDLRIKIG 328
Query: 686 IK*YIAGLYVPMHNADARLFVEIS*ASCNPQAYFISC*PIQVQSSISKQCFIKASTLHVL 507
IK* IAGLYVP+HN D R ++I ASCN AY +C P+ S +KQ ++AS L VL
Sbjct: 327 IK*DIAGLYVPVHNRDDRFLMKIGKASCNA*AYLKTCWPV*A*PSFAKQSMVQASILQVL 148
Query: 506 INQKWFISLKAKTKQLHKITVLHSGNSFYFSYEFLLPLARCFR 378
IN++W I+LKA QLH+ITVLHS SFYF EF PL RCFR
Sbjct: 147 INKQWLIALKAAAIQLHEITVLHSRYSFYFRREFPFPLMRCFR 19
Score = 190 bits (410), Expect = 1e-047
Identities = 94/170 (55%), Positives = 112/170 (65%)
Frame = +2 / +3
Query: 377 I*NISPREEGIRS*NRNYFPSAAP*SCEVVWFLP*GK*TTFGL*VHGEWKP**SIVWKWK 556
+*+IS E+GIR NRNY SA P*S EVVW LP*G+* T L*V GEWKP VW+ +
Sbjct: 18 V*SISSGEKGIRDGNRNYISSATP*SREVVWLLP*GQ*ATACL*VPGEWKPGPCSVWQKR 197
Query: 557 IELELVNTI*NMLGDCKRLSLSPRRV*HPHCA*GHKGQQCIT*CHFEP*DFGFRARQTL* 736
++ L NT *+ML CKR LS + HP CA GHKGQQ +T*C *D G ARQTL*
Sbjct: 198 VKPILANTF*DMLKRCKRPFLSS*GIYHPCCAQGHKGQQYLT*CQS*S*DLGLWARQTL* 377
Query: 737 R*KDTC*HKSCWYIWLSFT*VRHERSHD*ES*YFCFWCGHVGDYCWKAEL 886
+DTC H+S WYIWLS T*V HER +D*E C +GD+ W+ +L
Sbjct: 378 *PEDTCEHQSGWYIWLSRT*VCHERPYD*EDRRVCIRGRSIGDFIWETKL 527
Score = 182 bits (391), Expect = 4e-045
Identities = 88/155 (56%), Positives = 107/155 (69%)
Frame = +1 / +2
Query: 364 QLNNYLKHLAKGRRNS*LK*KLFPECSTVIL*SCLVFALREINHFWFMSTWRVEALIKHC 543
++ + LKHL +G+ NS K*KL+ EC+TVI *SC+ ALR I+H FMSTWR+EA C
Sbjct: 5 RVGSCLKHLIRGKGNSRRK*KLYLECNTVIS*SCMAAALRAISHCLFMSTWRMEAWTMLC 184
Query: 544 LEMED*T*IGQHDIKYAWGLQEA*LISTKSLASALCIGT*RPAMYYLMPL*TLRFRISGS 723
L E GQH ++YA LQEA I ++L+S LC GT*RPA+ YLMP+ LR R GS
Sbjct: 185 LAKEGQAYTGQHVLRYA*ALQEAFPIFMRNLSSLLCTGT*RPAISYLMPILILRSRTLGS 364
Query: 724 PNFMTIKRHMLAQKLLVHLAIFHLSTP*EVT*LRK 828
PNFM +RHM A K LVHLAI HLS P*E *LR+
Sbjct: 365 PNFMMTRRHM*APKWLVHLAISHLSMP*EAI*LRR 469
Score = 181 bits (390), Expect = 6e-045
Identities = 88/162 (54%), Positives = 99/162 (61%)
Frame = -3 / -1
Query: 864 SPT*PHQKQKYQLSQSCDLSWRTQVKDSQMYQQLLC*HVSFYRHKVWRARNPKS*GSKWH 685
SP + Q + SQS LSW TQV+DSQMYQ L C HVS HKVWRA++P+S* WH
Sbjct: 505 SPILRPRMQTRRSSQSYGLSWHTQVRDSQMYQPLWCSHVSSGHHKVWRAQSPRS*D*DWH 326
Query: 684 QVIHCWPLCPYAQCGC*TLRGDKLSLLQSPSIFYIVLTNSSSIFHFQTMLYQGFHSPCTH 505
QV +CWPLCP AQ G * D+ LLQ SI VL + QT GFHSP TH
Sbjct: 325 QVRYCWPLCPCAQQG**IPHEDRKGLLQRLSISQNVLASIGLTLFCQTEHGPGFHSPGTH 146
Query: 504 KPKVVYFPQGKNQTTSQDYGAALGK*FLFQLRIPSSLGEMFQ 379
K V Y PQG + TTS+DYG AL *FLF RIP S EM Q
Sbjct: 145 KQAVAYCPQGSSHTTSRDYGVALEI*FLFPSRIPFSPDEMLQ 20
Score = 29.5 bits (58), Expect(2) = 2e-095
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +3 / +1
Query: 900 DXXMAYLLXWVWQLYEED 953
D Y+ WVW+LYE++
Sbjct: 538 DENKVYIFEWVWELYEDN 591
>gb|BE558923.1|BE558923 HV_CEb0020M17f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0020M17f, mRNA sequence
Length = 821
Score = 199 bits (428), Expect(3) = 3e-072
Identities = 79/110 (71%), Positives = 97/110 (88%)
Frame = +3 / +3
Query: 555 RLNLNWSTRYKICLGIARGLAYLHEESSIRIVHRDIKASNVLLDATLNPKISDFGLAKLY 734
RL L+W TR KICLGIARGLAY+HEES+IRIVHRDIKASN+LLD L+ KISDFGLAKL
Sbjct: 213 RLALDWPTRRKICLGIARGLAYMHEESAIRIVHRDIKASNILLDKDLDAKISDFGLAKLN 392
Query: 735 DDKKTHVSTKVAGTFGYLSPEYAMRGHMTEKVDIFAFGVVMLEIIAGRPN 884
+D TH+STKVAGT GY++PEYAMRG++T+K D+++FGVV LEI++G+ N
Sbjct: 393 EDGHTHISTKVAGTIGYMAPEYAMRGYLTDKADVYSFGVVALEIVSGKSN 542
Score = 104 bits (221), Expect(2) = 3e-036
Identities = 58/107 (54%), Positives = 66/107 (61%)
Frame = -2 / -2
Query: 874 PAIISNMTTPKAKISTFSVM*PLMAYSGER*PNVPATFVLTCVFLSS*SLASPKSEILGF 695
P IS TTPK S SV *P +AYSG P VPATFVL V SS S A PKSEIL
Sbjct: 532 PLTISRATTPKL*TSALSVK*PRIAYSGAMYPIVPATFVLMWV*PSSLSFARPKSEILAS 353
Query: 694 KVASSNTLLAFMSLCTMRMLDSSWR*AKPLAIPKHILYRVDQFKFNL 554
K SS+ LLA +S CT+ + DSS A+PLAIP+ IL V Q +L
Sbjct: 352 KSLSSSILLALISRCTILIADSSCIYARPLAIPRQILRLVGQSNASL 212
Score = 86.8 bits (183), Expect(3) = 3e-072
Identities = 37/59 (62%), Positives = 45/59 (76%)
Frame = +3 / +3
Query: 369 KQLSETSRQGKKEFVAEIETISRVQHRNLVKLFGFCLEGNKPLLVYEYMESGSLDKALF 545
KQLS S+QG +EFV EI IS +QH NLV+L+G C EGN+ LLVYEYME+ L +ALF
Sbjct: 24 KQLSSKSKQGNREFVNEIGMISALQHPNLVRLYGCCTEGNQLLLVYEYMENNCLARALF 200
Score = 68.4 bits (143), Expect(2) = 3e-036
Identities = 31/60 (51%), Positives = 38/60 (63%)
Frame = -2 / -2
Query: 544 NNALSRLPLSMYS*TKSGLFPSRQKPNNFTRLRCCTREIVSISATNSFFPWRDVSDSCLI 365
N A +R SMYS*T + FPS Q+P N TR C + +I+ IS TNS FP D DSCL+
Sbjct: 199 NRARARQLFSMYS*TSNSWFPSVQQPYNLTRFGCWSADIMPISFTNSRFPCLDFDDSCLL 20
Score = 26.3 bits (51), Expect(3) = 3e-072
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +3 / +1
Query: 915 YLLXWVWQLYEEDHPLDIADPKLTXFDSXE 1004
YLL W L+E+ L++ DP L S E
Sbjct: 574 YLLDWACVLHEKRTLLELVDPDLRIQYSTE 663
>gb|BM101004.2|BM101004 EBpi01_SQ002_J03_R pistil, 1 DPA, no treatment, cv Optic, EBpi01
Hordeum vulgare subsp. vulgare cDNA clone
EBpi01_SQ002_J03 5', mRNA sequence
Length = 557
Score = 216 bits (467), Expect(2) = 2e-070
Identities = 86/100 (86%), Positives = 96/100 (96%)
Frame = +3 / +1
Query: 597 GIARGLAYLHEESSIRIVHRDIKASNVLLDATLNPKISDFGLAKLYDDKKTHVSTKVAGT 776
G+ARGL+YLHEESSIR+VHRDIKASN+LLDA LNPKISDFGLAKLYDD+KTHVSTKVAGT
Sbjct: 1 GVARGLSYLHEESSIRVVHRDIKASNILLDANLNPKISDFGLAKLYDDQKTHVSTKVAGT 180
Query: 777 FGYLSPEYAMRGHMTEKVDIFAFGVVMLEIIAGRPNYDGK 896
FGYL+PEYAMRGHMTEK+D+FAFGVV+LE +AGRPNY K
Sbjct: 181 FGYLAPEYAMRGHMTEKIDVFAFGVVVLETLAGRPNYSTK 300
Score = 163 bits (351), Expect = 1e-039
Identities = 77/101 (76%), Positives = 83/101 (82%)
Frame = -2 / -1
Query: 904 WSSLPS*FGLPAIISNMTTPKAKISTFSVM*PLMAYSGER*PNVPATFVLTCVFLSS*SL 725
+SS *FGLPA +SN TTP A S FSV+ PLMAYSG R*PNVPATFVLTCVF SS*SL
Sbjct: 308 FSSFVL*FGLPAKVSNTTTPNANTSIFSVIWPLMAYSGAR*PNVPATFVLTCVFWSS*SL 129
Query: 724 ASPKSEILGFKVASSNTLLAFMSLCTMRMLDSSWR*AKPLA 602
ASPKSEILG ++ASS LLAFMSLCT RMLDSS R* +PLA
Sbjct: 128 ASPKSEILGLRLASSKILLAFMSLCTTRMLDSS*R*ERPLA 6
Score = 133 bits (286), Expect = 1e-030
Identities = 55/99 (55%), Positives = 76/99 (76%)
Frame = -1 / -3
Query: 896 LTIIVRPSSNNLQHDHTKSKNINFLSHVTSHGVLR*KIAKCTSNFCANMCLFIVIKFGEP 717
L +V S +LQ+ + K+++ LSH+ SHG+LR +IAKCTSN A+MCL ++IKFGEP
Sbjct: 300 LRAVVWSPS*SLQYYDPECKHVDLLSHMASHGILRCEIAKCTSNLRAHMCLLVIIKFGEP 121
Query: 716 EIRNLRVQSGIK*YIAGLYVPMHNADARLFVEIS*ASCN 600
++R+LR++ GIK* IAGLYVP+HN DAR ++I ASCN
Sbjct: 120 KVRDLRIKIGIK*DIAGLYVPVHNTDARFLMKIGKASCN 4
Score = 117 bits (250), Expect = 1e-025
Identities = 51/88 (57%), Positives = 59/88 (67%)
Frame = -3 / -2
Query: 864 SPT*PHQKQKYQLSQSCDLSWRTQVKDSQMYQQLLC*HVSFYRHKVWRARNPKS*GSKWH 685
SP + Q + SQS LSW TQV+DSQMYQQ C HVS HKVWRA++P+S* WH
Sbjct: 268 SPILRPRMQTRRSSQSYGLSWHTQVRDSQMYQQPSCSHVSSGHHKVWRAQSPRS*D*DWH 89
Query: 684 QVIHCWPLCPYAQCGC*TLRGDKLSLLQ 601
QV +CWPLCP AQ GC* D+ LLQ
Sbjct: 88 QVRYCWPLCPCAQHGC*IPHEDRKGLLQ 5
Score = 116 bits (247), Expect(2) = 6e-031
Identities = 53/95 (55%), Positives = 62/95 (65%)
Frame = +2 / +3
Query: 602 CKRLSLSPRRV*HPHCA*GHKGQQCIT*CHFEP*DFGFRARQTL*R*KDTC*HKSCWYIW 781
CKR LS +*HP CA GHKGQQ +T*C *D G ARQTL* +DTC H+ CWYIW
Sbjct: 6 CKRPFLSS*GI*HPCCAQGHKGQQYLT*CQS*S*DLGLWARQTL**PEDTCEHEGCWYIW 185
Query: 782 LSFT*VRHERSHD*ES*YFCFWCGHVGDYCWKAEL 886
LS T*V HER +D*E C +GD+ W+ +L
Sbjct: 186 LSRT*VCHERPYD*EDRRVCIRGRSIGDFSWETKL 290
Score = 103 bits (219), Expect(2) = 2e-024
Identities = 49/76 (64%), Positives = 57/76 (75%)
Frame = +1 / +2
Query: 601 LQEA*LISTKSLASALCIGT*RPAMYYLMPL*TLRFRISGSPNFMTIKRHMLAQKLLVHL 780
LQEA I ++LAS LC GT*RPA+ YLMP+ LR R GSPNFM +RHM A++LLVHL
Sbjct: 5 LQEAFPIFMRNLASVLCTGT*RPAISYLMPILILRSRTLGSPNFMMTRRHM*ARRLLVHL 184
Query: 781 AIFHLSTP*EVT*LRK 828
AI HLS P*E *LR+
Sbjct: 185 AISHLSMP*EAI*LRR 232
Score = 70.3 bits (147), Expect(2) = 2e-070
Identities = 28/71 (39%), Positives = 37/71 (52%)
Frame = +3 / +1
Query: 900 DXXMAYLLXWVWQLYEEDHPLDIADPKLTXFDSXELLXAXXIXXXXXXXSPRXXXSMSXX 1079
D Y+ WVW+LYE++ PLD+ DP+L FDS E+L A + SP SMS
Sbjct: 301 DENKVYIFEWVWELYEDNQPLDVLDPRLEEFDSEEVLRAIKVALLCTQGSPHQRPSMSRV 480
Query: 1080 XSMLXXXXXXP 1112
+ML P
Sbjct: 481 VAMLTGDVEAP 513
Score = 38.6 bits (78), Expect(2) = 6e-031
Identities = 21/67 (31%), Positives = 29/67 (43%)
Frame = +2 / +3
Query: 911 GLSFXMGLATLRGRSSARHCGSQAHXIR*XXVAXCHXHXXXXHXXLTSSXXIXVXXXVNA 1090
GL F MG+ T+RG+ +A G +A +R A CH H L + V +A
Sbjct: 312 GLYFRMGVGTIRGQPAAGRVGPEAGRVRQRGGAPCHQGGAALHPGLPPPAPLHVEGGGDA 491
Query: 1091 XXXXRXA 1111
R A
Sbjct: 492 DGRRRGA 512
Score = 29.9 bits (59), Expect(2) = 2e-024
Identities = 19/63 (30%), Positives = 22/63 (34%)
Frame = +1 / +2
Query: 901 TXXWLIF*XGSGNFTRKIIRSTLRIPSSQXSIVXSCXVPXASXXXAXXAHLVXXXXCRXX 1080
T IF G GN+TR R T + S C VP A A CR
Sbjct: 302 TRTRFIFSNGCGNYTRTTSRWTCWTRGWKSSTARRCSVPSRWRCSAPRAPPTSAPPCRGW 481
Query: 1081 CQC 1089
+C
Sbjct: 482 WRC 490
>emb|AJ784275.3| Hordeum vulgare subsp. vulgare mRNA for putative lectin receptor-type
protein kinase (lrk1 gene)
Length = 2338
Score = 210 bits (454), Expect(3) = 1e-063
Identities = 89/173 (51%), Positives = 117/173 (67%)
Frame = +3 / +2
Query: 360 VAIKQLSETSRQGKKEFVAEIETISRVQHRNLVKLFGFCLEGNKPLLVYEYMESGSLDKA 539
VA+K+LS SRQGKKEF+AE+ +I ++H+N+ +L G+C + LLVYEYME+GSLDK
Sbjct: 1187 VAVKRLSHDSRQGKKEFIAEVVSIGHLRHQNIARLLGYCRRKGEFLLVYEYMENGSLDKY 1366
Query: 540 LFGNGRLNLNWSTRYKICLGIARGLAYLHEESSIRIVHRDIKASNVLLDATLNPKISDFG 719
L L WS RY I G+A L YLHEE ++HRDIK SNVLLD+ +N + DFG
Sbjct: 1367 LHTRNGPTLCWSQRYSIIKGVASSLLYLHEEWEHVVIHRDIKPSNVLLDSKMNGWLGDFG 1546
Query: 720 LAKLYDDKKTHVSTKVAGTFGYLSPEYAMRGHMTEKVDIFAFGVVMLEIIAGR 878
LAK+Y + +T VAGT GYL+PE A G T D++AFG+ +LE+ GR
Sbjct: 1547 LAKIYGRETAAPATHVAGTIGYLAPELARTGRPTPFTDVYAFGMFLLEVTCGR 1705
Score = 49.6 bits (102), Expect(3) = 1e-063
Identities = 20/32 (62%), Positives = 24/32 (75%)
Frame = +3 / +2
Query: 249 YTYGELRTATENFSSANLLGEGGYGSVYKGKL 344
++Y +L ATE FS NLLG GG+GSVYKG L
Sbjct: 1073 FSYKDLFHATEGFSDKNLLGRGGFGSVYKGVL 1168
Score = 22.6 bits (43), Expect(3) = 1e-063
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +3 / +2
Query: 918 LLXWVWQLYEEDHPLDIADPKL 983
L+ WV + + + LD DP+L
Sbjct: 1745 LVEWVLEHHRDGSILDTVDPRL 1810
>gb|BE196273.3|BE196273 HVSMEh0091N12f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0091N12f, mRNA sequence
Length = 951
Score = 139 bits (298), Expect(2) = 3e-062
Identities = 51/99 (51%), Positives = 74/99 (74%)
Frame = +3 / +2
Query: 570 WSTRYKICLGIARGLAYLHEESSIRIVHRDIKASNVLLDATLNPKISDFGLAKLYDDKKT 749
W R K+ +G A+ LAYLHE ++VHRDIK+SN+L+D N K+SDFGLAK+ K+
Sbjct: 311 WDNRMKVVIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNGKVSDFGLAKMLGSDKS 490
Query: 750 HVSTKVAGTFGYLSPEYAMRGHMTEKVDIFAFGVVMLEI 866
H++T+V GTFGY++PEYA G + EK D+++FGV++ E+
Sbjct: 491 HITTRVMGTFGYVAPEYANTGMLNEKSDVYSFGVLLWEL 607
Score = 120 bits (256), Expect(2) = 3e-062
Identities = 47/92 (51%), Positives = 68/92 (73%)
Frame = +3 / +2
Query: 273 ATENFSSANLLGEGGYGSVYKGKLVDGSVVAIKQLSETSRQGKKEFVAEIETISRVQHRN 452
AT FS N+LGEGGYG VY+G+LV+G+ VAIK++ Q +KEF E+E I V+H+N
Sbjct: 8 ATSRFSKENVLGEGGYGVVYRGRLVNGTEVAIKKIFNNMGQAEKEFRVEVEAIGHVRHKN 187
Query: 453 LVKLFGFCLEGNKPLLVYEYMESGSLDKALFG 548
LV+L G+C+EG +LVYE++ +G+L++ L G
Sbjct: 188 LVRLLGYCVEGVNRMLVYEFVNNGNLEQWLHG 283
>gb|CA029588.1|CA029588 HZ65K08r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ65K08
5-PRIME, mRNA sequence
Length = 610
Score = 150 bits (323), Expect(2) = 4e-062
Identities = 58/105 (55%), Positives = 79/105 (75%)
Frame = +3 / +1
Query: 564 LNWSTRYKICLGIARGLAYLHEESSIRIVHRDIKASNVLLDATLNPKISDFGLAKLYDDK 743
L W R KI LGIA+ LAYLHE ++VHRDIK+SN+L+D N K+SDFGLAK+
Sbjct: 286 LTWEARMKIVLGIAKALAYLHEAIEPKVVHRDIKSSNILIDEDFNGKLSDFGLAKMLGAG 465
Query: 744 KTHVSTKVAGTFGYLSPEYAMRGHMTEKVDIFAFGVVMLEIIAGR 878
K+H++T+V GTFGY++PEYA G + EK D+++FGV++LE + GR
Sbjct: 466 KSHITTRVMGTFGYVAPEYANTGLLNEKSDVYSFGVLLLEAVTGR 600
Score = 108 bits (230), Expect(2) = 4e-062
Identities = 41/82 (50%), Positives = 62/82 (75%)
Frame = +3 / +1
Query: 303 LGEGGYGSVYKGKLVDGSVVAIKQLSETSRQGKKEFVAEIETISRVQHRNLVKLFGFCLE 482
+GEGGYG VY+G+L++G+ VAIK+L Q +KEF E+E I V+H+NLV+L G+C+E
Sbjct: 19 IGEGGYGVVYRGRLINGTDVAIKKLLNNMGQAEKEFRVEVEAIGHVRHKNLVRLLGYCVE 198
Query: 483 GNKPLLVYEYMESGSLDKALFG 548
G +LVYEY+ +G+L++ + G
Sbjct: 199 GIHRMLVYEYVNNGNLEQWIHG 264
Score = 77.6 bits (163), Expect(2) = 4e-023
Identities = 44/105 (41%), Positives = 56/105 (53%)
Frame = -2 / -3
Query: 877 LPAIISNMTTPKAKISTFSVM*PLMAYSGER*PNVPATFVLTCVFLSS*SLASPKSEILG 698
LP S +TPK S FS P++AYSG P VP T V+ +F + LA+PKSE
Sbjct: 599 LPVTASRSSTPKLYTSLFSFNRPVLAYSGATYPKVPITRVVIWLFPAPNILANPKSESFP 420
Query: 697 FKVASSNTLLAFMSLCTMRMLDSSWR*AKPLAIPKHILYRVDQFK 563
K +S LL +S CT +S R*A LAIP+ I R Q +
Sbjct: 419 LKSSSIRILLDLISRCTTFGSMASCR*ASALAIPRTIFIRASQVR 285
Score = 51.0 bits (105), Expect(2) = 4e-023
Identities = 29/76 (38%), Positives = 33/76 (43%)
Frame = -2 / -3
Query: 532 SRLPLSMYS*TKSGLFPSRQKPNNFTRLRCCTREIVSISATNSFFPWRDVSDSCLIAXXX 353
S+ PL YS T PS Q P+ TR C T + S S NSF W + S IA
Sbjct: 248 SKFPLFTYSYTSILWIPSTQYPSRRTRFLCLTWPMASTSTLNSFSAWPMLFSSFFIATSV 69
Query: 352 XXXXXXXXXXPYPPSP 305
PYPPSP
Sbjct: 68 PFMSRPR*TTPYPPSP 21
>gb|BE214948.1|BE214948 HV_CEb0005F01f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0005F01f, mRNA sequence
Length = 938
Score = 106 bits (226), Expect(3) = 3e-059
Identities = 40/65 (61%), Positives = 53/65 (81%)
Frame = +3 / +3
Query: 555 RLNLNWSTRYKICLGIARGLAYLHEESSIRIVHRDIKASNVLLDATLNPKISDFGLAKLY 734
R L+W TR+KI G+ARG+ YLHE+S +++VHRD+KASNVLLD +NPKISDFGLAK++
Sbjct: 273 RRQLDWETRFKIINGVARGIQYLHEDSQLKVVHRDLKASNVLLDMNMNPKISDFGLAKIF 452
Query: 735 DDKKT 749
+T
Sbjct: 453 GRDQT 467
Score = 101 bits (215), Expect(3) = 3e-059
Identities = 39/81 (48%), Positives = 60/81 (74%)
Frame = +3 / +3
Query: 303 LGEGGYGSVYKGKLVDGSVVAIKQLSETSRQGKKEFVAEIETISRVQHRNLVKLFGFCLE 482
LGEGG+G VYKG L+ G +A+K++S+TS QG +E E+ +++++H+NLV+L G CLE
Sbjct: 18 LGEGGFGPVYKGTLLSGDEIAVKRMSKTSTQGVEELKNELALVAKLKHKNLVRLVGVCLE 197
Query: 483 GNKPLLVYEYMESGSLDKALF 545
+ LL+YE++ + SLD LF
Sbjct: 198 QQERLLIYEFVPNRSLDLILF 260
Score = 60.2 bits (125), Expect(3) = 3e-059
Identities = 22/47 (46%), Positives = 33/47 (70%)
Frame = +3 / +3
Query: 738 DKKTHVSTKVAGTFGYLSPEYAMRGHMTEKVDIFAFGVVMLEIIAGR 878
D+ V+ +V GT+GY++PEY MRG T K D F FGV++L ++ G+
Sbjct: 459 DQTQGVTNRVIGTYGYMAPEYVMRGKYTVKSDAFNFGVLVLGVVTGK 599
>gb|AF474072.1| Hordeum vulgare sp. vulgare cultivar Morex BAC clone 773k14, complete
sequence
Length = 113510
Score = 116 bits (249), Expect(5) = 1e-058
Identities = 46/71 (64%), Positives = 58/71 (81%)
Frame = +3 / -2
Query: 564 LNWSTRYKICLGIARGLAYLHEESSIRIVHRDIKASNVLLDATLNPKISDFGLAKLYDDK 743
LNW TR++I +GI RGL YLHEES++RIVHRDIKASN+LLD PKISDFGLA+ + +
Sbjct: 2878 LNWRTRHQIIIGIGRGLQYLHEESNLRIVHRDIKASNILLDDKFQPKISDFGLARFFPED 2699
Query: 744 KTHVSTKVAGT 776
+T++ST AGT
Sbjct: 2698 QTYLSTAFAGT 2666
Score = 74.4 bits (156), Expect(5) = 1e-058
Identities = 30/53 (56%), Positives = 39/53 (73%)
Frame = +3 / -2
Query: 387 SRQGKKEFVAEIETISRVQHRNLVKLFGFCLEGNKPLLVYEYMESGSLDKALF 545
S QG+ EF E+ I+ +QH+NLV+L G C EG + LLVYEYM++ SLDK LF
Sbjct: 3079 SGQGESEFFMEVNMITSIQHKNLVRLVGCCSEGTERLLVYEYMKNKSLDKILF 2921
Score = 68.9 bits (144), Expect(3) = 2e-022
Identities = 36/72 (50%), Positives = 44/72 (61%)
Frame = -2 / +3
Query: 778 NVPATFVLTCVFLSS*SLASPKSEILGFKVASSNTLLAFMSLCTMRMLDSSWR*AKPLAI 599
+VPA VL V+ S A PKS ILG+ ++S LLA MS CTMR LDSS R P +
Sbjct: 2664 SVPAKAVLR*VWSSGKKRARPKSLILGWNLSSRRMLLALMSRCTMRRLDSSCRYCSPRPM 2843
Query: 598 PKHILYRVDQFK 563
P I +RV QF+
Sbjct: 2844 PMMIWWRVRQFR 2879
Score = 62.0 bits (129), Expect(5) = 1e-058
Identities = 25/47 (53%), Positives = 33/47 (70%)
Frame = +3 / -1
Query: 780 GYLSPEYAMRGHMTEKVDIFAFGVVMLEIIAGRPNYDGKLDXXMAYL 920
GY +PEYA+RG +T K D ++FGV++LEII+ R N D L M YL
Sbjct: 2552 GYTAPEYAIRGELTVKADTYSFGVLVLEIISSRKNTDLNLPNEMQYL 2412
Score = 37.7 bits (76), Expect(3) = 2e-022
Identities = 22/51 (43%), Positives = 25/51 (49%)
Frame = -2 / +3
Query: 535 LSRLPLSMYS*TKSGLFPSRQKPNNFTRLRCCTREIVSISATNSFFPWRDV 383
LSRL MYS*T PS Q+P TR C I+ S NS P D+
Sbjct: 2931 LSRLLFFMYS*TSRRSVPSEQQPTRRTRFLC*MLVIMFTSMKNSDSPCPDL 3083
Score = 36.8 bits (74), Expect(3) = 2e-022
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = -2 / +1
Query: 868 IISNMTTPKAKISTFSVM*PLMAYSG 791
+IS+ +TPK +S F+V PLMAYSG
Sbjct: 2464 MISSTSTPKLYVSAFTVSSPLMAYSG 2541
Score = 26.3 bits (51), Expect(5) = 1e-058
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +3 / -2
Query: 333 KGKLVDGSVVAIKQLS 380
+GKL DG VA+KQLS
Sbjct: 3136 QGKLDDGRKVAVKQLS 3089
Score = 22.1 bits (42), Expect(5) = 1e-058
Identities = 7/24 (29%), Positives = 14/24 (58%)
Frame = +3 / -2
Query: 933 WQLYEEDHPLDIADPKLTXFDSXE 1004
W+LYE+ L++ D ++ + E
Sbjct: 2311 WRLYEQSKILELVDGRVQGGEGFE 2240
>gb|BI948363.1|BI948363 HVSMEl0009E03f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0009E03f, mRNA sequence
Length = 936
Score = 120 bits (256), Expect(3) = 3e-058
Identities = 48/98 (48%), Positives = 67/98 (68%)
Frame = +3 / +1
Query: 249 YTYGELRTATENFSSANLLGEGGYGSVYKGKLVDGSVVAIKQLSETSRQGKKEFVAEIET 428
+T+ EL AT+NF +LGEGG+G VYKG+L +G VA+KQL QG +EF+ E+
Sbjct: 202 FTFRELAAATKNFRQDCMLGEGGFGRVYKGRLENGQAVAVKQLDRNGLQGNREFLVEVLM 381
Query: 429 ISRVQHRNLVKLFGFCLEGNKPLLVYEYMESGSLDKAL 542
+S + H NLV L G+C +G++ LLVYE+M GSL+ L
Sbjct: 382 LSLLHHTNLVNLIGYCADGDQRLLVYEFMPLGSLEDHL 495
Score = 76.7 bits (161), Expect(3) = 3e-058
Identities = 29/56 (51%), Positives = 43/56 (76%)
Frame = +3 / +1
Query: 564 LNWSTRYKICLGIARGLAYLHEESSIRIVHRDIKASNVLLDATLNPKISDFGLAKL 731
L+W+TR KI G A+GL +LH+++S +++RD K+SN+LL +PK+SD GLAKL
Sbjct: 523 LDWNTRMKIAAGAAKGLEHLHDKASPXVIYRDFKSSNILLGERFHPKLSDCGLAKL 690
Score = 68.0 bits (142), Expect(3) = 3e-058
Identities = 26/49 (53%), Positives = 35/49 (71%)
Frame = +3 / +1
Query: 744 KTHVSTKVAGTFGYLSPEYAMRGHMTEKVDIFAFGVVMLEIIAGRPNYD 890
KTHVST+V GT+GY +PEY M G +T K D+++F V+ LE+I R D
Sbjct: 706 KTHVSTRVMGTYGYCAPEYCMTGQLTVKSDVYSFRVLFLELITRRIGID 852
>gb|BJ464341.1|BJ464341 BJ464341 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags33o06 5', mRNA sequence
Length = 650
Score = 160 bits (343), Expect(2) = 4e-057
Identities = 65/129 (50%), Positives = 94/129 (72%)
Frame = +3 / +3
Query: 342 LVDGSVVAIKQLSETSRQGKKEFVAEIETISRVQHRNLVKLFGFCLEGNKPLLVYEYMES 521
L D + VA+K+ + S+QG EF EIE +SR++HR+LV L G+C E N+ +LVYEYME+
Sbjct: 24 LRDDTKVAVKRGNPKSQQGLNEFRTEIELLSRLRHRHLVSLIGYCDERNEMILVYEYMEN 203
Query: 522 GSLDKALFGNGRLNLNWSTRYKICLGIARGLAYLHEESSIRIVHRDIKASNVLLDATLNP 701
G++ L+G+ +LNW R +IC+G ARGL YLH S+ I+HRD+K++N+LLD L
Sbjct: 204 GTVKSHLYGSDNPSLNWKQRLEICIGAARGLHYLHTGSAKAIIHRDVKSANILLDENLLA 383
Query: 702 KISDFGLAK 728
K++DFGL+K
Sbjct: 384 KVADFGLSK 410
Score = 82.6 bits (174), Expect(2) = 4e-057
Identities = 33/62 (53%), Positives = 41/62 (66%)
Frame = +3 / +3
Query: 744 KTHVSTKVAGTFGYLSPEYAMRGHMTEKVDIFAFGVVMLEIIAGRPNYDGKLDXXMAYLL 923
+THVST V G+FGYL PEY R +TEK D+++FGVVMLE++ RP D L M L
Sbjct: 429 QTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVMLEVLCARPVIDPSLPREMVNLA 608
Query: 924 XW 929
W
Sbjct: 609 EW 614
>dbj|AB109213.1| Hordeum vulgare BRI1 gene for putative brassinosteroid-insensitive 1,
complete cds, cultivar:Haruna Nijo
Length = 3558
Score = 122 bits (261), Expect(3) = 9e-057
Identities = 50/105 (47%), Positives = 72/105 (68%)
Frame = +3 / +1
Query: 252 TYGELRTATENFSSANLLGEGGYGSVYKGKLVDGSVVAIKQLSETSRQGKKEFVAEIETI 431
T G+L AT F + +L+G GG+G VYK +L DG VVAIK+L S QG +EF AE+ETI
Sbjct: 2419 TLGDLVEATNGFHNDSLIGSGGFGDVYKAQLKDGRVVAIKKLIHVSGQGDREFTAEMETI 2598
Query: 432 SRVQHRNLVKLFGFCLEGNKPLLVYEYMESGSLDKALFGNGRLNL 566
+++HRNLV L G+C G + LL+Y++M+ GSL+ L ++ +
Sbjct: 2599 GKIKHRNLVPLLGYCKIGEERLLMYDFMKYGSLEDVLHDRKKIGV 2733
Score = 86.3 bits (182), Expect(3) = 9e-057
Identities = 33/67 (49%), Positives = 47/67 (70%)
Frame = +3 / +1
Query: 558 LNLNWSTRYKICLGIARGLAYLHEESSIRIVHRDIKASNVLLDATLNPKISDFGLAKLYD 737
+ LNW+ R KI +G ARGLA+LH I+HRD+K+SNVL+D L ++SDFG+A++
Sbjct: 2731 VRLNWAARRKIAIGAARGLAFLHHNCIPHIIHRDMKSSNVLVDENLEARVSDFGMARMMS 2910
Query: 738 DKKTHVS 758
TH+S
Sbjct: 2911 VVDTHLS 2931
Score = 51.0 bits (105), Expect(3) = 9e-057
Identities = 19/42 (45%), Positives = 29/42 (69%)
Frame = +3 / +1
Query: 765 VAGTFGYLSPEYAMRGHMTEKVDIFAFGVVMLEIIAGRPNYD 890
+AGT GY+ PEY T K D++++GVV+LE++ G+P D
Sbjct: 2941 LAGTPGYVPPEYYQSFRCTTKGDVYSYGVVLLELLTGKPPTD 3066
>gb|AW982539.2|AW982539 HVSMEg0003I16f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0003I16f, mRNA sequence
Length = 933
Score = 220 bits (475), Expect = 1e-056
Identities = 89/168 (52%), Positives = 124/168 (73%)
Frame = +3 / +3
Query: 375 LSETSRQGKKEFVAEIETISRVQHRNLVKLFGFCLEGNKPLLVYEYMESGSLDKALFGNG 554
L + S QG++EF AE++ ISRV H++LV L G+C+ +K LLVYE++ + +L+ + G
Sbjct: 3 LRDGSGQGEREFQAEVDIISRVHHKHLVTLVGYCISEDKRLLVYEFVPNNTLEFHIHGRR 182
Query: 555 RLNLNWSTRYKICLGIARGLAYLHEESSIRIVHRDIKASNVLLDATLNPKISDFGLAKLY 734
++W +R +I LG A+GLAYLHE+ +I+HRDIKASN+LLD K++DFGLAKL
Sbjct: 183 GPTMDWPSRLRIALGSAKGLAYLHEDCHPKIIHRDIKASNILLDYRCEAKVADFGLAKLT 362
Query: 735 DDKKTHVSTKVAGTFGYLSPEYAMRGHMTEKVDIFAFGVVMLEIIAGR 878
D THVST+V GTFGYL+PEYA G +TEK D+F+FGV++LE+I R
Sbjct: 363 SDNNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITER 506
>gb|BG414953.2|BG414953 HVSMEk0004G13f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0004G13f, mRNA sequence
Length = 632
Score = 219 bits (472), Expect = 3e-056
Identities = 87/206 (42%), Positives = 141/206 (68%)
Frame = +3 / +3
Query: 252 TYGELRTATENFSSANLLGEGGYGSVYKGKLVDGSVVAIKQLSETSRQGKKEFVAEIETI 431
TY + A +F+++N +G GG+G+ YK ++ G +VAIK+L+ QG ++F AE++T+
Sbjct: 6 TYETVVRAAGSFNASNCIGSGGFGATYKAEIAPGILVAIKRLAIGRFQGIQQFQAEVKTL 185
Query: 432 SRVQHRNLVKLFGFCLEGNKPLLVYEYMESGSLDKALFGNGRLNLNWSTRYKICLGIARG 611
R +H NLV L G+ L ++ L+Y ++ G+L++ + + ++W +KI L +AR
Sbjct: 186 GRCRHDNLVTLIGYHLSDSEMFLIYNFLPGGNLERFIQERTKRPIDWRMLHKIALDVARA 365
Query: 612 LAYLHEESSIRIVHRDIKASNVLLDATLNPKISDFGLAKLYDDKKTHVSTKVAGTFGYLS 791
LAYLH+ RI+HRD+K SN+LLD +SDFGLA+L + +TH +T VAGTFGY++
Sbjct: 366 LAYLHDNCVPRILHRDVKPSNILLDNEYTAYLSDFGLARLLGNSETHATTGVAGTFGYVA 545
Query: 792 PEYAMRGHMTEKVDIFAFGVVMLEII 869
PEYAM +++K D++++GVV+LE+I
Sbjct: 546 PEYAMTCRVSDKADVYSYGVVLLELI 623
>gb|CB878333.1|CB878333 HP08C14T HP Hordeum vulgare subsp. vulgare cDNA clone HP08C14
5-PRIME, mRNA sequence
Length = 649
Score = 107 bits (228), Expect(3) = 6e-056
Identities = 42/69 (60%), Positives = 53/69 (76%)
Frame = +3 / +3
Query: 555 RLNLNWSTRYKICLGIARGLAYLHEESSIRIVHRDIKASNVLLDATLNPKISDFGLAKLY 734
R L+W RYKI GIARGL YLHE+S +++VHRD+KASN+LLD +NPKISDFGLA+L+
Sbjct: 204 REQLDWGKRYKIINGIARGLQYLHEDSQLKVVHRDLKASNILLDTNMNPKISDFGLARLF 383
Query: 735 DDKKTHVST 761
+T T
Sbjct: 384 GRDQTQAVT 410
Score = 76.7 bits (161), Expect(3) = 6e-056
Identities = 32/82 (39%), Positives = 49/82 (59%)
Frame = +3 / +3
Query: 738 DKKTHVSTKVAGTFGYLSPEYAMRGHMTEKVDIFAFGVVMLEIIAGRPNYDGKLDXXMAY 917
D+ V+++V GT+GY++PEY MRG+ + K D F+FGV++LEI+ GR N D
Sbjct: 390 DQTQAVTSRVVGTYGYMAPEYVMRGNYSVKSDAFSFGVMVLEIVTGRKNNDCYNSQQSED 569
Query: 918 LLXWVWQLYEEDHPLDIADPKL 983
LL +W+ + L DP +
Sbjct: 570 LLTTIWEHWTGGTVLATMDPSI 635
Score = 73.0 bits (153), Expect(3) = 6e-056
Identities = 29/60 (48%), Positives = 45/60 (75%)
Frame = +3 / +3
Query: 366 IKQLSETSRQGKKEFVAEIETISRVQHRNLVKLFGFCLEGNKPLLVYEYMESGSLDKALF 545
+K+LS++S QG KE E+ +++++H+NLV+L G CLE + LLVYE++ + SLDK LF
Sbjct: 12 VKRLSKSSTQGVKELKNELALVAKLKHKNLVRLVGVCLEHEERLLVYEFVPNRSLDKILF 191
Score = 63.8 bits (133), Expect(3) = 2e-021
Identities = 33/64 (51%), Positives = 37/64 (57%)
Frame = -2 / -1
Query: 760 VLTCVFLSS*SLASPKSEILGFKVASSNTLLAFMSLCTMRMLDSSWR*AKPLAIPKHILY 581
V CV+ SLA PKSEILGF + SS LLA S T +SSWR +P AIP ILY
Sbjct: 409 VTACVWSRPKSLARPKSEILGFMLVSSKILLALRSRWTTLSWESSWRYCRPRAIPFMILY 230
Query: 580 RVDQ 569
Q
Sbjct: 229 LFPQ 218
Score = 40.0 bits (81), Expect(3) = 2e-021
Identities = 21/51 (41%), Positives = 26/51 (50%)
Frame = -2 / -1
Query: 904 WSSLPS*FGLPAIISNMTTPKAKISTFSVM*PLMAYSGER*PNVPATFVLT 752
W S F LP IS+ TPK S F+ P + YSG P VP T ++T
Sbjct: 556 WEL*QSLFFLPVTISSTMTPKLNASDFTE*FPRITYSGAMYPYVPTTRLVT 404
Score = 36.3 bits (73), Expect(3) = 2e-021
Identities = 22/57 (38%), Positives = 28/57 (49%)
Frame = -2 / -1
Query: 544 NNALSRLPLSMYS*TKSGLFPSRQKPNNFTRLRCCTREIVSISATNSFFPWRDVSDS 374
N LSRL S*T S SRQ P + TR C + + S +SF P ++ DS
Sbjct: 190 NRILSRLRFGTNS*TSSLSSCSRQTPTSLTRFLCLSLATKASSFFSSFTPCVELFDS 20
>gb|CA032771.1|CA032771 HX14C15r HX Hordeum vulgare subsp. vulgare cDNA clone HX14C15
5-PRIME, mRNA sequence
Length = 638
Score = 171 bits (367), Expect(3) = 6e-056
Identities = 66/106 (62%), Positives = 84/106 (79%)
Frame = +3 / +1
Query: 561 NLNWSTRYKICLGIARGLAYLHEESSIRIVHRDIKASNVLLDATLNPKISDFGLAKLYDD 740
N WS R IC+G+ARGLAYLHEE IVHRDIKASN+L+D PKI DFGLAKL+ D
Sbjct: 145 NFTWSVRSSICIGVARGLAYLHEEIPSPIVHRDIKASNILMDKNYVPKIGDFGLAKLFPD 324
Query: 741 KKTHVSTKVAGTFGYLSPEYAMRGHMTEKVDIFAFGVVMLEIIAGR 878
TH+ST+VAGT GYL+PEYA G +T+K DI++FGV+++E+I+G+
Sbjct: 325 NITHISTRVAGTTGYLAPEYAWHGQLTKKADIYSFGVLVIEVISGK 462
Score = 98.2 bits (208), Expect(2) = 6e-027
Identities = 55/97 (56%), Positives = 60/97 (61%)
Frame = -2 / -1
Query: 877 LPAIISNMTTPKAKISTFSVM*PLMAYSGER*PNVPATFVLTCVFLSS*SLASPKSEILG 698
LP + S TPK IS F V *P AYSG R*P VPAT VL V LS SLA PKS ILG
Sbjct: 461 LPLMTSMTRTPKLYISAFLVN*PCHAYSGAR*PVVPATRVLMWVILSGNSLARPKSPILG 282
Query: 697 FKVASSNTLLAFMSLCTMRMLDSSWR*AKPLAIPKHI 587
S + LLA MSLCT+ SS R A+PLA P H+
Sbjct: 281 T*FLSMSILLALMSLCTIGDGISSCRYARPLATPMHM 171
Score = 58.3 bits (121), Expect(3) = 6e-056
Identities = 22/38 (57%), Positives = 30/38 (78%)
Frame = +3 / +1
Query: 438 VQHRNLVKLFGFCLEGNKPLLVYEYMESGSLDKALFGN 551
V+H NLV+L G C+E N +LVYEY+E+ SLD+AL G+
Sbjct: 16 VKHPNLVELIGCCVEANNRILVYEYLENSSLDRALLGS 129
Score = 43.2 bits (88), Expect(2) = 6e-027
Identities = 21/37 (56%), Positives = 24/37 (64%)
Frame = -2 / -1
Query: 547 PNNALSRLPLSMYS*TKSGLFPSRQKPNNFTRLRCCT 437
P++A SRL S YS TK LF S Q+P N TRL C T
Sbjct: 125 PSSARSRLLFSRYSYTKMRLFASTQQPINSTRLGCFT 15
Score = 27.6 bits (54), Expect(3) = 6e-056
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = +3 / +1
Query: 915 YLLXWVWQLYEEDHPLDIADPKLTXFDSXELL 1010
+LL W+LYE + ++ DP L + E +
Sbjct: 496 FLLEKTWELYEAGNLKELVDPDLGDYPDEEAI 591
>gb|BG414636.2|BG414636 HVSMEk0003C21f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0003C21f, mRNA sequence
Length = 868
Score = 155 bits (332), Expect(2) = 8e-056
Identities = 61/123 (49%), Positives = 85/123 (69%)
Frame = +3 / +1
Query: 564 LNWSTRYKICLGIARGLAYLHEESSIRIVHRDIKASNVLLDATLNPKISDFGLAKLYDDK 743
L W R KI LGIA+ LAYLHE ++VHRDIK+SN+L+D N K+SDFGLAK+
Sbjct: 229 LTWEARMKIVLGIAKALAYLHEAIEPKVVHRDIKSSNILIDEDFNGKLSDFGLAKMLGAG 408
Query: 744 KTHVSTKVAGTFGYLSPEYAMRGHMTEKVDIFAFGVVMLEIIAGRPNYDGKLDXXMAYLL 923
K+H++T+V GTFGY++PEYA G + EK D+++FGV++LE + GR D +L+
Sbjct: 409 KSHITTRVMGTFGYVAPEYANTGLLNEKSDVYSFGVLLLEAVTGRDPVDYGRPANEVHLV 588
Query: 924 XWV 932
W+
Sbjct: 589 EWL 597
Score = 83.1 bits (175), Expect(2) = 8e-056
Identities = 32/69 (46%), Positives = 50/69 (72%)
Frame = +3 / +1
Query: 342 LVDGSVVAIKQLSETSRQGKKEFVAEIETISRVQHRNLVKLFGFCLEGNKPLLVYEYMES 521
L++G+ VAIK+L Q +KEF E+E I V+H+NLV+L G+C+EG +LVYEY+ +
Sbjct: 1 LINGTDVAIKKLLNNMGQAEKEFXVEVEAIGHVRHKNLVRLLGYCVEGIHRMLVYEYVNN 180
Query: 522 GSLDKALFG 548
G+L++ + G
Sbjct: 181 GNLEQWIHG 207
Score = 77.6 bits (163), Expect(2) = 5e-021
Identities = 44/105 (41%), Positives = 56/105 (53%)
Frame = -2 / -3
Query: 877 LPAIISNMTTPKAKISTFSVM*PLMAYSGER*PNVPATFVLTCVFLSS*SLASPKSEILG 698
LP S +TPK S FS P++AYSG P VP T V+ +F + LA+PKSE
Sbjct: 542 LPVTASRSSTPKLYTSLFSFNRPVLAYSGATYPKVPITRVVIWLFPAPNILANPKSESFP 363
Query: 697 FKVASSNTLLAFMSLCTMRMLDSSWR*AKPLAIPKHILYRVDQFK 563
K +S LL +S CT +S R*A LAIP+ I R Q +
Sbjct: 362 LKSSSIRILLDLISRCTTFGSMASCR*ASALAIPRTIFIRASQVR 228
Score = 43.7 bits (89), Expect(2) = 5e-021
Identities = 23/57 (40%), Positives = 27/57 (47%)
Frame = -2 / -3
Query: 532 SRLPLSMYS*TKSGLFPSRQKPNNFTRLRCCTREIVSISATNSFFPWRDVSDSCLIA 362
S+ PL YS T PS Q P+ TR C T + S S NSF W + S IA
Sbjct: 191 SKFPLFTYSYTSILWIPSTQYPSRRTRFLCLTWPMASTSTXNSFSAWPMLFSSFFIA 21
>gb|BU978248.1|BU978248 HA12N04r HA Hordeum vulgare subsp. vulgare cDNA clone HA12N04
5-PRIME, mRNA sequence
Length = 601
Score = 121 bits (259), Expect(2) = 8e-056
Identities = 48/90 (53%), Positives = 63/90 (70%)
Frame = +3 / +3
Query: 564 LNWSTRYKICLGIARGLAYLHEESSIRIVHRDIKASNVLLDATLNPKISDFGLAKLYDDK 743
L+W R I LG A+G+ YLHE ++VHRDIK+SN+LLD N K+SDFGLAKL
Sbjct: 330 LSWDARMDIVLGTAKGITYLHEGLEPKVVHRDIKSSNILLDKRWNSKVSDFGLAKLLGSD 509
Query: 744 KTHVSTKVAGTFGYLSPEYAMRGHMTEKVD 833
+V+T+V GTFGY++PEYA G + E+ D
Sbjct: 510 SNYVTTRVMGTFGYVAPEYASTGMLNERSD 599
Score = 116 bits (248), Expect(2) = 8e-056
Identities = 47/100 (47%), Positives = 67/100 (67%)
Frame = +3 / +3
Query: 252 TYGELRTATENFSSANLLGEGGYGSVYKGKLVDGSVVAIKQLSETSRQGKKEFVAEIETI 431
T EL AT F+ ++GEGGYG VY G DG VA+K L Q ++EF E+E I
Sbjct: 12 TLRELDDATAGFAPDRVVGEGGYGIVYLGVFADGRQVAVKNLLNNRGQAEREFTVEVEAI 191
Query: 432 SRVQHRNLVKLFGFCLEGNKPLLVYEYMESGSLDKALFGN 551
RV+H+NLV+L G+C+EG +LVYEY+++G+L++ L G+
Sbjct: 192 GRVRHKNLVRLLGYCVEGAHRILVYEYVDNGNLEQWLHGD 311
>gb|BF261155.2|BF261155 HVSMEf0023O11f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0023O11f, mRNA sequence
Length = 748
Score = 140 bits (301), Expect(3) = 9e-056
Identities = 59/123 (47%), Positives = 83/123 (67%)
Frame = +3 / +3
Query: 360 VAIKQLSETSRQGKKEFVAEIETISRVQHRNLVKLFGFCLEGNKPLLVYEYMESGSLDKA 539
VAIK+ + S QG EF EIE +S+++HR+LV L G+C E N+ +LVY+YM G+L +
Sbjct: 198 VAIKRGNPLSEQGIHEFQTEIEMLSKLRHRHLVSLIGYCEEKNEMILVYDYMAHGTLREH 377
Query: 540 LFGNGRLNLNWSTRYKICLGIARGLAYLHEESSIRIVHRDIKASNVLLDATLNPKISDFG 719
L+ L+W R +IC+G ARGL YLH + I+HRD+K +N+LLD K+SDFG
Sbjct: 378 LYKTQNAPLSWRQRLEICIGAARGLHYLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFG 557
Query: 720 LAK 728
L+K
Sbjct: 558 LSK 566
Score = 70.7 bits (148), Expect(3) = 9e-056
Identities = 26/45 (57%), Positives = 34/45 (75%)
Frame = +3 / +3
Query: 747 THVSTKVAGTFGYLSPEYAMRGHMTEKVDIFAFGVVMLEIIAGRP 881
THVST V G+FGYL PEY R +TEK D+++FGVV+ E++ RP
Sbjct: 588 THVSTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARP 722
Score = 45.1 bits (92), Expect(3) = 9e-056
Identities = 14/36 (38%), Positives = 26/36 (72%)
Frame = +3 / +3
Query: 249 YTYGELRTATENFSSANLLGEGGYGSVYKGKLVDGS 356
+++ E++ AT+NF + +LG GG+G VY G++ G+
Sbjct: 84 FSFAEIKAATKNFDESRILGVGGFGKVYHGEIDGGT 191
>dbj|AB109215.1| Hordeum vulgare BRI1 gene for putative brassinosteroid-insensitive 1,
complete cds, cultivar:Akashinriki
Length = 3558
Score = 118 bits (253), Expect(3) = 1e-055
Identities = 49/105 (46%), Positives = 71/105 (67%)
Frame = +3 / +1
Query: 252 TYGELRTATENFSSANLLGEGGYGSVYKGKLVDGSVVAIKQLSETSRQGKKEFVAEIETI 431
T G+L AT F + +L+G GG+G VYK +L DG VVAIK+L S QG +EF AE+ETI
Sbjct: 2419 TLGDLVEATNGFHNDSLIGSGGFGDVYKAQLKDGRVVAIKKLIHVSGQGDREFTAEMETI 2598
Query: 432 SRVQHRNLVKLFGFCLEGNKPLLVYEYMESGSLDKALFGNGRLNL 566
+++ RNLV L G+C G + LL+Y++M+ GSL+ L ++ +
Sbjct: 2599 GKIKRRNLVPLLGYCKIGEERLLMYDFMKYGSLEDVLHDRKKIGV 2733
Score = 86.3 bits (182), Expect(3) = 1e-055
Identities = 33/67 (49%), Positives = 47/67 (70%)
Frame = +3 / +1
Query: 558 LNLNWSTRYKICLGIARGLAYLHEESSIRIVHRDIKASNVLLDATLNPKISDFGLAKLYD 737
+ LNW+ R KI +G ARGLA+LH I+HRD+K+SNVL+D L ++SDFG+A++
Sbjct: 2731 VRLNWAARRKIAIGAARGLAFLHHNCIPHIIHRDMKSSNVLVDENLEARVSDFGMARMMS 2910
Query: 738 DKKTHVS 758
TH+S
Sbjct: 2911 VVDTHLS 2931
Score = 51.0 bits (105), Expect(3) = 1e-055
Identities = 19/42 (45%), Positives = 29/42 (69%)
Frame = +3 / +1
Query: 765 VAGTFGYLSPEYAMRGHMTEKVDIFAFGVVMLEIIAGRPNYD 890
+AGT GY+ PEY T K D++++GVV+LE++ G+P D
Sbjct: 2941 LAGTPGYVPPEYYQSFRCTTKGDVYSYGVVLLELLTGKPPTD 3066
>gb|CB883350.1|CB883350 HQ01P13w HQ Hordeum vulgare subsp. vulgare cDNA clone HQ01P13
3-PRIME, mRNA sequence
Length = 617
Score = 216 bits (467), Expect = 1e-055
Identities = 91/173 (52%), Positives = 123/173 (71%)
Frame = +3 / +1
Query: 249 YTYGELRTATENFSSANLLGEGGYGSVYKGKLVDGSVVAIKQLSETSRQGKKEFVAEIET 428
+TY E+ T FS NLLGEGG+GSVYKG L +G VAIK+L + S QG++EF AE+E
Sbjct: 94 FTYEEMHNITNGFSDQNLLGEGGFGSVYKGCLPEGREVAIKKLKDGSGQGEREFQAEVEI 273
Query: 429 ISRVQHRNLVKLFGFCLEGNKPLLVYEYMESGSLDKALFGNGRLNLNWSTRYKICLGIAR 608
ISRV HR+LV L G+C+ G++ LLVY+++ + +L L G G L+W R KI G AR
Sbjct: 274 ISRVHHRHLVSLVGYCISGDQRLLVYDFVPNDTLHYHLHGRGVPVLDWPARVKISAGSAR 453
Query: 609 GLAYLHEESSIRIVHRDIKASNVLLDATLNPKISDFGLAKLYDDKKTHVSTKV 767
G+AYLHE+ RI+HRDIK+SN+L+D +++DFGLA+L D THV+T+V
Sbjct: 454 GIAYLHEDCHPRIIHRDIKSSNILVDNNFEAQVADFGLARLAMDFATHVTTRV 612
>gb|CA025815.1|CA025815 HZ53D16r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ53D16
5-PRIME, mRNA sequence
Length = 569
Score = 106 bits (226), Expect(3) = 2e-055
Identities = 41/66 (62%), Positives = 55/66 (83%)
Frame = +3 / +3
Query: 564 LNWSTRYKICLGIARGLAYLHEESSIRIVHRDIKASNVLLDATLNPKISDFGLAKLYDDK 743
L+W TR+ I LGIARGL YLHE+S +++VHRD+KASNVLLD + PKISDFG+AK+++D+
Sbjct: 246 LDWKTRHGIILGIARGLLYLHEDSLLKVVHRDLKASNVLLDNKMRPKISDFGMAKIFEDE 425
Query: 744 KTHVST 761
V+T
Sbjct: 426 CIEVNT 443
Score = 90.9 bits (192), Expect(3) = 2e-055
Identities = 38/71 (53%), Positives = 52/71 (73%)
Frame = +3 / +3
Query: 333 KGKLVDGSVVAIKQLSETSRQGKKEFVAEIETISRVQHRNLVKLFGFCLEGNKPLLVYEY 512
+G L GS +A+K+LS SRQG EF E+E I+++QHRNLV+L G+C E ++ LLVYEY
Sbjct: 12 RGVLTGGSEIAVKRLSARSRQGAAEFRNEVELIAKLQHRNLVRLLGWCAERDEKLLVYEY 191
Query: 513 MESGSLDKALF 545
+ + SLD LF
Sbjct: 192 LPNRSLDAFLF 224
Score = 58.3 bits (121), Expect(3) = 2e-055
Identities = 19/41 (46%), Positives = 32/41 (78%)
Frame = +3 / +3
Query: 762 KVAGTFGYLSPEYAMRGHMTEKVDIFAFGVVMLEIIAGRPN 884
+V GT+GY++PE+ M G + K D+F+FGV+++EI+ G+ N
Sbjct: 447 RVVGTYGYMAPEFVMEGVFSVKSDVFSFGVLLIEILGGKRN 569
>gb|AV913572.1|AV913572 AV913572 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags22i21 5', mRNA sequence
Length = 634
Score = 160 bits (345), Expect(2) = 2e-055
Identities = 62/123 (50%), Positives = 87/123 (70%)
Frame = +3 / +1
Query: 564 LNWSTRYKICLGIARGLAYLHEESSIRIVHRDIKASNVLLDATLNPKISDFGLAKLYDDK 743
L W R I LG A+GLAYLH + S RI+HRDIK+SN+LLD ++SDFGLAKL +D+
Sbjct: 244 LEWEARINIILGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNFESRVSDFGLAKLLEDE 423
Query: 744 KTHVSTKVAGTFGYLSPEYAMRGHMTEKVDIFAFGVVMLEIIAGRPNYDGKLDXXMAYLL 923
++H++T VAGTFGYL+PEY G TEK D+++FGV++LEI++G+ D ++
Sbjct: 424 ESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEILSGKRPTDASFIEKGLNIV 603
Query: 924 XWV 932
W+
Sbjct: 604 GWL 612
Score = 75.8 bits (159), Expect(2) = 2e-055
Identities = 32/73 (43%), Positives = 48/73 (65%)
Frame = +3 / +1
Query: 324 SVYKGKLVDGSVVAIKQLSETSRQGKKEFVAEIETISRVQHRNLVKLFGFCLEGNKPLLV 503
+VYK + DGSV A+K++ +T+ K F E+E + V+HRNLV L G+C + LL+
Sbjct: 7 TVYKLAMDDGSVFALKRIVKTNEGRDKFFDRELEILGSVKHRNLVNLRGYCNSPSSKLLI 186
Query: 504 YEYMESGSLDKAL 542
Y+Y+ GSLD+ L
Sbjct: 187 YDYLPGGSLDEVL 225
>gb|CA011695.1|CA011695 HT03E18r HT Hordeum vulgare subsp. vulgare cDNA clone HT03E18
5-PRIME, mRNA sequence
Length = 542
Score = 128 bits (275), Expect(2) = 9e-054
Identities = 51/94 (54%), Positives = 72/94 (76%)
Frame = +3 / +1
Query: 264 LRTATENFSSANLLGEGGYGSVYKGKLVDGSVVAIKQLSETSRQGKKEFVAEIETISRVQ 443
LR AT+NF+ +N LGEGG+G+VYKG L +G +A+K+LS++S QG +E E+ ++++Q
Sbjct: 46 LRAATDNFAESNKLGEGGFGAVYKGVLSEGEEIAVKRLSQSSTQGIEELKTELVLVAKLQ 225
Query: 444 HRNLVKLFGFCLEGNKPLLVYEYMESGSLDKALF 545
H+NLV+L G CLEG + LLVYEYM + SLD LF
Sbjct: 226 HKNLVRLLGVCLEGQEKLLVYEYMPNLSLDTVLF 327
Score = 102 bits (217), Expect(2) = 9e-054
Identities = 41/57 (71%), Positives = 48/57 (84%)
Frame = +3 / +2
Query: 564 LNWSTRYKICLGIARGLAYLHEESSIRIVHRDIKASNVLLDATLNPKISDFGLAKLY 734
L+W R KI G+ARGL YLHE+S +RIVHRD+KASNVLLD+ NPKISDFGLAKL+
Sbjct: 350 LDWGKRLKIVNGVARGLQYLHEDSQLRIVHRDLKASNVLLDSDCNPKISDFGLAKLF 520
>gb|BQ765210.1|BQ765210 EBro03_SQ006_D18_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ006_D18 5', mRNA sequence
Length = 628
Score = 98.7 bits (209), Expect(3) = 2e-052
Identities = 38/60 (63%), Positives = 47/60 (78%)
Frame = +3 / +1
Query: 555 RLNLNWSTRYKICLGIARGLAYLHEESSIRIVHRDIKASNVLLDATLNPKISDFGLAKLY 734
R L W R++I GI RGL YLHE+S + I+HRD+KASN+LLD +NPKISDFGLAKL+
Sbjct: 223 RQELTWGHRFRIIQGIGRGLLYLHEDSRLTIIHRDLKASNILLDPDMNPKISDFGLAKLF 402
Score = 83.5 bits (176), Expect(3) = 2e-052
Identities = 34/74 (45%), Positives = 52/74 (70%)
Frame = +3 / +1
Query: 336 GKLVDGSVVAIKQLSETSRQGKKEFVAEIETISRVQHRNLVKLFGFCLEGNKPLLVYEYM 515
G L DG +A+K+LS+TS+QG E E+ ++++QH+NLV+L G C++ + LLVYE++
Sbjct: 1 GTLHDGQEIAVKRLSKTSQQGLVEMRNEVVLVAKLQHKNLVRLLGCCIQEEEMLLVYEFL 180
Query: 516 ESGSLDKALFGNGR 557
+ SLDK LF R
Sbjct: 181 PNRSLDKILFDPAR 222
Score = 63.4 bits (132), Expect(3) = 2e-052
Identities = 21/43 (48%), Positives = 36/43 (83%)
Frame = +3 / +1
Query: 756 STKVAGTFGYLSPEYAMRGHMTEKVDIFAFGVVMLEIIAGRPN 884
++ +AGT+GY++PEYA+ G + K D++++GV++LEI+AGR N
Sbjct: 427 TSHIAGTYGYMAPEYALHGIFSAKSDVYSYGVLVLEIVAGRRN 555
>gb|BJ463669.1|BJ463669 BJ463669 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags32p24 5', mRNA sequence
Length = 657
Score = 89.0 bits (188), Expect(4) = 3e-052
Identities = 34/62 (54%), Positives = 46/62 (74%)
Frame = +3 / +3
Query: 564 LNWSTRYKICLGIARGLAYLHEESSIRIVHRDIKASNVLLDATLNPKISDFGLAKLYDDK 743
L+WS I GIA GL YLH+ S + ++HRD+K SN+LLD+ +NPKISDFGLAK+++
Sbjct: 267 LDWSKLVAIIEGIAHGLLYLHKHSRLLVIHRDLKPSNILLDSEMNPKISDFGLAKIFNSN 446
Query: 744 KT 749
T
Sbjct: 447 DT 452
Score = 73.5 bits (154), Expect(4) = 3e-052
Identities = 28/71 (39%), Positives = 48/71 (67%)
Frame = +3 / +3
Query: 735 DDKKTHVSTKVAGTFGYLSPEYAMRGHMTEKVDIFAFGVVMLEIIAGRPNYDGKLDXXMA 914
+D + +++ +V GT+GY++PEYA +G + K D+F+FGV++LEI++G+ N +
Sbjct: 444 NDTEGNITRRVIGTYGYMAPEYASKGIFSIKSDVFSFGVIILEILSGKHNSGQQQCGEFI 623
Query: 915 YLLXWVWQLYE 947
LL WQL+E
Sbjct: 624 NLLGHAWQLWE 656
Score = 69.3 bits (145), Expect(4) = 3e-052
Identities = 28/74 (37%), Positives = 49/74 (66%)
Frame = +3 / +3
Query: 345 VDGSVVAIKQLSETSRQGKKEFVAEIETISRVQHRNLVKLFGFCLEGNKPLLVYEYMESG 524
++G +A+K+L+ S QG EF E++ ++++QH NLV+L G C + + +LVYEY+ +
Sbjct: 45 LEGLEIAVKRLASHSGQGFIEFQNELQLVAKLQHLNLVRLLGCCSQEEEKILVYEYLPNK 224
Query: 525 SLDKALFGNGRLNL 566
SLD +F + +L
Sbjct: 225 SLDYFIFDEDKRSL 266
Score = 30.9 bits (61), Expect(4) = 3e-052
Identities = 10/13 (76%), Positives = 13/13 (100%)
Frame = +3 / +2
Query: 303 LGEGGYGSVYKGK 341
LGEGG+G+VYKG+
Sbjct: 5 LGEGGFGTVYKGR 43
>gb|AJ427599.1|AJ427599 AJ427599 Hordeum vulgare subsp. vulgare primary leaf 7-day old
seedling Hordeum vulgare subsp. vulgare cDNA clone
CE8a-14, mRNA sequence
Length = 2222
Score = 94.5 bits (200), Expect(4) = 7e-052
Identities = 37/68 (54%), Positives = 54/68 (79%)
Frame = +3 / +3
Query: 351 GSVVAIKQLSETSRQGKKEFVAEIETISRVQHRNLVKLFGFCLEGNKPLLVYEYMESGSL 530
G +A+K++S S+QG KEFVAEI +I R++HRNLV+L G+C ++ +LVY+YM +GSL
Sbjct: 1224 GVEIAVKKVSHGSKQGVKEFVAEIVSIGRIKHRNLVQLLGYCRRKDELILVYDYMPNGSL 1403
Query: 531 DKALFGNG 554
DK L+G+G
Sbjct: 1404 DKYLYGHG 1427
Score = 73.0 bits (153), Expect(4) = 7e-052
Identities = 30/62 (48%), Positives = 38/62 (61%)
Frame = +3 / +1
Query: 693 LNPKISDFGLAKLYDDKKTHVSTKVAGTFGYLSPEYAMRGHMTEKVDIFAFGVVMLEIIA 872
+N ++ DFGLAKLY+ +T+V GT GYL+PE G T D FAFG MLE+
Sbjct: 1576 MNGRLGDFGLAKLYEHGTNPQTTRVVGTTGYLAPELVRTGKATPLTDAFAFGTFMLEVAC 1755
Query: 873 GR 878
GR
Sbjct: 1756 GR 1761
Score = 55.6 bits (115), Expect(4) = 7e-052
Identities = 21/43 (48%), Positives = 29/43 (67%)
Frame = +3 / +3
Query: 558 LNLNWSTRYKICLGIARGLAYLHEESSIRIVHRDIKASNVLLD 686
+ L+W+ R + G+A GL YLHE ++HRD+K SNVLLD
Sbjct: 1440 ITLDWAQRLHVIKGVACGLHYLHERWEKVVIHRDVKTSNVLLD 1568
Score = 38.2 bits (77), Expect(4) = 7e-052
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +3 / +3
Query: 249 YTYGELRTATENFSSANLLGEGGYGSVYKGKL 344
+ Y +L AT+ F +LLG GG+ VYKG L
Sbjct: 1119 FAYKDLFQATKGFKDKHLLGAGGFSMVYKGVL 1214
>gb|BF263242.2|BF263242 HV_CEa0006D16f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0006D16f, mRNA sequence
Length = 910
Score = 99.6 bits (211), Expect(4) = 1e-051
Identities = 39/89 (43%), Positives = 60/89 (67%)
Frame = +3 / +2
Query: 360 VAIKQLSETSRQGKKEFVAEIETISRVQHRNLVKLFGFCLEGNKPLLVYEYMESGSLDKA 539
VA+KQL+ QG +E++AE+ + + +H++L+KL G+C + + LLVYE+M GSLD
Sbjct: 230 VAVKQLNIAGHQGHREWLAEVIFLGQFRHQHLLKLLGYCCQDEERLLVYEFMPRGSLDNH 409
Query: 540 LFGNGRLNLNWSTRYKICLGIARGLAYLH 626
LF L W TR K+ +G A+G+A+LH
Sbjct: 410 LFKRISATLPWCTRLKVAIGAAKGVAFLH 496
Score = 71.6 bits (150), Expect(4) = 1e-051
Identities = 25/48 (52%), Positives = 37/48 (77%)
Frame = +3 / +2
Query: 735 DDKKTHVSTKVAGTFGYLSPEYAMRGHMTEKVDIFAFGVVMLEIIAGR 878
+ ++THVST+V GT GY +PEY GH+ K D+++FGVV+LE++ GR
Sbjct: 605 EGEETHVSTRVMGTHGYAAPEYVQTGHLQVKSDVYSFGVVLLELLTGR 748
Score = 46.4 bits (95), Expect(4) = 1e-051
Identities = 16/29 (55%), Positives = 24/29 (82%)
Frame = +3 / +2
Query: 645 IVHRDIKASNVLLDATLNPKISDFGLAKL 731
+++RD+KA N+LLD+ K+SDFGLAK+
Sbjct: 512 VIYRDLKAXNILLDSDYTAKLSDFGLAKM 598
Score = 43.2 bits (88), Expect(4) = 1e-051
Identities = 16/30 (53%), Positives = 23/30 (76%)
Frame = +3 / +2
Query: 249 YTYGELRTATENFSSANLLGEGGYGSVYKG 338
++ ELR T +FS+ LLGEGG+G+V+KG
Sbjct: 98 FSLSELRGVTHDFSTGYLLGEGGFGAVHKG 187
>gb|BF260965.2|BF260965 HVSMEf0023G13f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0023G13f, mRNA sequence
Length = 755
Score = 139 bits (298), Expect(3) = 2e-051
Identities = 56/114 (49%), Positives = 77/114 (67%)
Frame = +3 / +2
Query: 408 FVAEIETISRVQHRNLVKLFGFCLEGNKPLLVYEYMESGSLDKALFGNGRLNLNWSTRYK 587
F AEI+T+ R++HR +V+L GFC LLVYEYM +GSL + L G +L+W TRYK
Sbjct: 263 FSAEIQTLGRIRHRYIVRLLGFCSNNETNLLVYEYMPNGSLGELLHGKKGGHLHWDTRYK 442
Query: 588 ICLGIARGLAYLHEESSIRIVHRDIKASNVLLDATLNPKISDFGLAKLYDDKKT 749
I + A+GL YLH + S I+HRD+K++N+LLD+ ++DFGLAK D T
Sbjct: 443 IAVEAAKGLCYLHHDCSPPILHRDVKSNNILLDSDFEAHVADFGLAKFLQDSGT 604
Score = 54.7 bits (113), Expect(3) = 2e-051
Identities = 20/50 (40%), Positives = 34/50 (68%)
Frame = +3 / +2
Query: 729 LYDDKKTHVSTKVAGTFGYLSPEYAMRGHMTEKVDIFAFGVVMLEIIAGR 878
L D + + +AG++GY++PEYA + EK D+++ GVV+LE+I G+
Sbjct: 587 LQDSGTSECMSAIAGSYGYIAPEYAYTLKVDEKSDVYSXGVVLLELITGK 736
Score = 47.8 bits (98), Expect(3) = 2e-051
Identities = 18/38 (47%), Positives = 27/38 (71%)
Frame = +3 / +2
Query: 279 ENFSSANLLGEGGYGSVYKGKLVDGSVVAIKQLSETSR 392
++ N++G+GG G+VYKG + DG VA+K+LS SR
Sbjct: 128 DSLKEENMIGKGGAGTVYKGTMPDGDHVAVKRLSTMSR 241
>gb|CD663430.1|CD663430 UCRHV18_05bh04_b1 Drought-stressed Dicktoo barley epidermis cDNA
library Hordeum vulgare subsp. vulgare cDNA clone
UCRHV18_05bh04, mRNA sequence
Length = 840
Score = 117 bits (250), Expect(2) = 3e-051
Identities = 48/105 (45%), Positives = 71/105 (67%)
Frame = +3 / -2
Query: 252 TYGELRTATENFSSANLLGEGGYGSVYKGKLVDGSVVAIKQLSETSRQGKKEFVAEIETI 431
+Y E+ +AT F+ +NLLG GG+G VYKG L G A+K+LS+ S QG EF E+ I
Sbjct: 644 SYEEILSATNCFADSNLLGRGGFGKVYKGTLEGGKEAAVKRLSKGSSQGTMEFKNEVVLI 465
Query: 432 SRVQHRNLVKLFGFCLEGNKPLLVYEYMESGSLDKALFGNGRLNL 566
+++QH+NLV+L G C+ ++ LL+YEY+ + SLD +F R +L
Sbjct: 464 AKLQHKNLVRLLGCCIHEDEKLLIYEYLPNKSLDTYIFDGARKHL 330
Score = 105 bits (224), Expect(2) = 3e-051
Identities = 40/66 (60%), Positives = 52/66 (78%)
Frame = +3 / -2
Query: 564 LNWSTRYKICLGIARGLAYLHEESSIRIVHRDIKASNVLLDATLNPKISDFGLAKLYDDK 743
LNW R+KI GIARGL YLH++S + IVHRD+KASN+LLDA + PKISDFG+A+++
Sbjct: 329 LNWLARFKIIKGIARGLLYLHQDSRLTIVHRDLKASNILLDADMTPKISDFGMARIFGAN 150
Query: 744 KTHVST 761
+ H ST
Sbjct: 149 QNHAST 132
>gb|BU998735.1|BU998735 HI12A05r HI Hordeum vulgare subsp. vulgare cDNA clone HI12A05
5-PRIME, mRNA sequence
Length = 629
Score = 108 bits (230), Expect(3) = 4e-051
Identities = 45/83 (54%), Positives = 56/83 (67%)
Frame = +3 / +1
Query: 564 LNWSTRYKICLGIARGLAYLHEESSIRIVHRDIKASNVLLDATLNPKISDFGLAKLYDDK 743
L W R++I G+A GL YLHE+ +VHRDIKASNVLLDA +N ++ DFGLA+LYD
Sbjct: 376 LGWGQRFRIIKGVASGLLYLHEDWEQVVVHRDIKASNVLLDADMNGRLGDFGLARLYDHG 555
Query: 744 KTHVSTKVAGTFGYLSPEYAMRG 812
+T V GT GYL+PE G
Sbjct: 556 TDPHTTHVVGTMGYLAPELGHTG 624
Score = 90.9 bits (192), Expect(3) = 4e-051
Identities = 35/64 (54%), Positives = 51/64 (79%)
Frame = +3 / +1
Query: 360 VAIKQLSETSRQGKKEFVAEIETISRVQHRNLVKLFGFCLEGNKPLLVYEYMESGSLDKA 539
+A+K+++ SRQG +EFVAE+ TI R++HRNLV+L G+C + LLVY+YM +GSLDK
Sbjct: 166 IAVKKVAHGSRQGMREFVAEVVTIGRLRHRNLVQLLGYCRRKGELLLVYDYMPNGSLDKH 345
Query: 540 LFGN 551
L+G+
Sbjct: 346 LYGD 357
Score = 66.1 bits (138), Expect(2) = 5e-021
Identities = 37/72 (51%), Positives = 41/72 (56%)
Frame = -2 / -1
Query: 811 PLMAYSGER*PNVPATFVLTCVFLSS*SLASPKSEILGFKVASSNTLLAFMSLCTMRMLD 632
P+ SG R P VP T V+ S*SLASPKS F ASS+TLLA MS CT
Sbjct: 623 PVCPSSGARYPMVPTTCVVCGSVPWS*SLASPKSPSRPFMSASSSTLLALMSRCTTTCSQ 444
Query: 631 SSWR*AKPLAIP 596
SSWR + P A P
Sbjct: 443 SSWRYSSPDATP 408
Score = 55.1 bits (114), Expect(2) = 5e-021
Identities = 29/59 (49%), Positives = 35/59 (59%)
Frame = -2 / -1
Query: 562 FNLPFPNNALSRLPLSMYS*TKSGLFPSRQKPNNFTRLRCCTREIVSISATNSFFPWRD 386
F+ P LSRLPL M S T S RQ P++ TRLRC +R +V+ SATNS P D
Sbjct: 368 FSFWSPYRCLSRLPLGM*SYTSSSSPLRRQ*PSSCTRLRCRSRPMVTTSATNSLIPCLD 192
Score = 41.8 bits (85), Expect(3) = 4e-051
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = +3 / +1
Query: 249 YTYGELRTATENFSSANLLGEGGYGSVYKGKL 344
++Y +L AT+ FS LLG GG+G VY+G L
Sbjct: 49 FSYKDLYHATDGFSDERLLGIGGFGRVYRGSL 144
>gb|BE060160.1|BE060160 HVSMEg0011B12f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0011B12f, mRNA sequence
Length = 553
Score = 149 bits (320), Expect(2) = 7e-051
Identities = 62/112 (55%), Positives = 80/112 (71%)
Frame = +3 / +2
Query: 555 RLNLNWSTRYKICLGIARGLAYLHEESSIRIVHRDIKASNVLLDATLNPKISDFGLAKLY 734
R +L W R KI LG A+ LAYLHE ++VHRDIK+SN+L+D + K+SDFGLAKL
Sbjct: 191 RGSLTWEARIKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDDDFDAKVSDFGLAKLL 370
Query: 735 DDKKTHVSTKVAGTFGYLSPEYAMRGHMTEKVDIFAFGVVMLEIIAGRPNYD 890
K+HV+T+V GTFGY++PEYA G + EK DI++FGVV+LE I G D
Sbjct: 371 GAGKSHVTTRVMGTFGYVAPEYANTGLLNEKSDIYSFGVVILEAITGEDPVD 526
Score = 72.1 bits (151), Expect(2) = 7e-051
Identities = 26/52 (50%), Positives = 40/52 (76%)
Frame = +3 / +2
Query: 393 QGKKEFVAEIETISRVQHRNLVKLFGFCLEGNKPLLVYEYMESGSLDKALFG 548
Q +KEF E+E I V+H+NLV+L G+C+EG + +LVYEY+ +G+L++ L G
Sbjct: 23 QAEKEFRVEVEAIGHVRHKNLVRLLGYCVEGTQRILVYEYVNNGNLEQWLHG 178
>gb|BJ547296.1|BJ547296 BJ547296 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal30b02 5', mRNA sequence
Length = 618
Score = 107 bits (229), Expect(4) = 1e-050
Identities = 45/79 (56%), Positives = 55/79 (69%)
Frame = +3 / +1
Query: 564 LNWSTRYKICLGIARGLAYLHEESSIRIVHRDIKASNVLLDATLNPKISDFGLAKLYDDK 743
L WSTR KI IA+GLAYLHEE + +I H D+K N+LLD N K+SDFGL KL D
Sbjct: 301 LEWSTRCKIITNIAKGLAYLHEECTKKIAHLDVKPQNILLDDDFNAKLSDFGLCKLIDRD 480
Query: 744 KTHVSTKVAGTFGYLSPEY 800
+ V TK+ GT GYL+PE+
Sbjct: 481 MSQVVTKMRGTPGYLAPEW 537
Score = 74.8 bits (157), Expect(4) = 1e-050
Identities = 29/51 (56%), Positives = 38/51 (74%)
Frame = +3 / +1
Query: 393 QGKKEFVAEIETISRVQHRNLVKLFGFCLEGNKPLLVYEYMESGSLDKALF 545
QGK+EF AE++TI + H NLV+L GFC E + LLVYEYM GSLD+ ++
Sbjct: 121 QGKREFSAEVQTIGSIHHINLVRLIGFCAEKSHRLLVYEYMPKGSLDRWIY 273
Score = 40.0 bits (81), Expect(4) = 1e-050
Identities = 13/27 (48%), Positives = 21/27 (77%)
Frame = +3 / +1
Query: 804 MRGHMTEKVDIFAFGVVMLEIIAGRPN 884
+ +TEK D+++FGVV++E+I GR N
Sbjct: 538 LTSQITEKADVYSFGVVVMEVICGRKN 618
Score = 34.5 bits (69), Expect(4) = 1e-050
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = +3 / +1
Query: 303 LGEGGYGSVYKGKLVD 350
LGEGG+GSV+KG+L D
Sbjct: 37 LGEGGFGSVFKGELTD 84
>gb|AY943294.1| Hordeum vulgare subsp. vulgare clone BAC 673I14, complete sequence
Length = 108608
Score = 82.2 bits (173), Expect(3) = 2e-050
Identities = 33/63 (52%), Positives = 43/63 (68%)
Frame = +3 / +3
Query: 744 KTHVSTKVAGTFGYLSPEYAMRGHMTEKVDIFAFGVVMLEIIAGRPNYDGKLDXXMAYLL 923
KTHVST+V GT+GY +PEYAM G +T K D++++GVV+LEII GR D L+
Sbjct: 81783 KTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSYGVVLLEIITGRRAIDNTRATGEQNLV 81962
Query: 924 XWV 932
WV
Sbjct: 81963 AWV 81971
Score = 78.5 bits (165), Expect(3) = 2e-050
Identities = 33/69 (47%), Positives = 45/69 (65%)
Frame = +3 / +3
Query: 342 LVDGSVVAIKQLSETSRQGKKEFVAEIETISRVQHRNLVKLFGFCLEGNKPLLVYEYMES 521
L+ VVAIKQL QG +EF+ E+ +S + H +LV L G+C +G++ LLVYEYM
Sbjct: 81273 LLPSQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPHLVNLIGYCADGDQRLLVYEYMPL 81452
Query: 522 GSLDKALFG 548
GSL+ L G
Sbjct: 81453 GSLEDHLHG 81479
Score = 78.0 bits (164), Expect(3) = 2e-050
Identities = 29/56 (51%), Positives = 44/56 (78%)
Frame = +3 / +3
Query: 564 LNWSTRYKICLGIARGLAYLHEESSIRIVHRDIKASNVLLDATLNPKISDFGLAKL 731
L+W+TR KI G A+GL +LH++++ +++RD+K SN+LL +PK+SDFGLAKL
Sbjct: 81600 LDWNTRMKIAAGAAKGLEHLHDKTNPPVIYRDLKCSNILLGEGYHPKLSDFGLAKL 81767
>gb|CA024753.1|CA024753 HZ50D08r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ50D08
5-PRIME, mRNA sequence
Length = 630
Score = 138 bits (297), Expect(2) = 3e-050
Identities = 58/104 (55%), Positives = 73/104 (70%)
Frame = +3 / +1
Query: 237 NVFCYTYGELRTATENFSSANLLGEGGYGSVYKGKLVDGSVVAIKQLSETSRQGKKEFVA 416
N+ ++ EL++AT NF + N +G GG+G VYKG L DG+ VAIK+LS S+QG EF+
Sbjct: 160 NIQVFSLKELKSATRNFHTTNCIGRGGFGPVYKGDLKDGTQVAIKRLSAESKQGTNEFLT 339
Query: 417 EIETISRVQHRNLVKLFGFCLEGNKPLLVYEYMESGSLDKALFG 548
EI+ IS V+H NLVKL G C+EGN LLVYEY E SL AL G
Sbjct: 340 EIDVISNVRHPNLVKLIGCCVEGNNRLLVYEYAEKNSLSNALLG 471
Score = 80.3 bits (169), Expect(2) = 3e-050
Identities = 33/46 (71%), Positives = 36/46 (78%)
Frame = +3 / +1
Query: 564 LNWSTRYKICLGIARGLAYLHEESSIRIVHRDIKASNVLLDATLNP 701
LNW TR IC G A GLA+LHEE+ RIVHRDIKASN+LLD TL P
Sbjct: 493 LNWQTRAAICTGTASGLAFLHEEAQPRIVHRDIKASNILLDKTLVP 630
>gb|BJ547039.1|BJ547039 BJ547039 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal37j21 5', mRNA sequence
Length = 617
Score = 107 bits (229), Expect(4) = 6e-050
Identities = 45/79 (56%), Positives = 55/79 (69%)
Frame = +3 / +1
Query: 564 LNWSTRYKICLGIARGLAYLHEESSIRIVHRDIKASNVLLDATLNPKISDFGLAKLYDDK 743
L WSTR KI IA+GLAYLHEE + +I H D+K N+LLD N K+SDFGL KL D
Sbjct: 301 LEWSTRCKIITNIAKGLAYLHEECTKKIAHLDVKPQNILLDDDFNAKLSDFGLCKLIDRD 480
Query: 744 KTHVSTKVAGTFGYLSPEY 800
+ V TK+ GT GYL+PE+
Sbjct: 481 MSQVVTKMRGTPGYLAPEW 537
Score = 74.8 bits (157), Expect(4) = 6e-050
Identities = 29/51 (56%), Positives = 38/51 (74%)
Frame = +3 / +1
Query: 393 QGKKEFVAEIETISRVQHRNLVKLFGFCLEGNKPLLVYEYMESGSLDKALF 545
QGK+EF AE++TI + H NLV+L GFC E + LLVYEYM GSLD+ ++
Sbjct: 121 QGKREFSAEVQTIGSIHHINLVRLIGFCAEKSHRLLVYEYMPKGSLDRWIY 273
Score = 37.7 bits (76), Expect(4) = 6e-050
Identities = 12/25 (48%), Positives = 20/25 (80%)
Frame = +3 / +1
Query: 804 MRGHMTEKVDIFAFGVVMLEIIAGR 878
+ +TEK D+++FGVV++E+I GR
Sbjct: 538 LTSQITEKADVYSFGVVVMEVICGR 612
Score = 34.5 bits (69), Expect(4) = 6e-050
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = +3 / +1
Query: 303 LGEGGYGSVYKGKLVD 350
LGEGG+GSV+KG+L D
Sbjct: 37 LGEGGFGSVFKGELTD 84
>gb|BG369831.1|BG369831 HVSMEi0026D06f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0026D06f, mRNA sequence
Length = 502
Score = 198 bits (426), Expect = 6e-050
Identities = 81/157 (51%), Positives = 113/157 (71%)
Frame = +3 / +3
Query: 249 YTYGELRTATENFSSANLLGEGGYGSVYKGKLVDGSVVAIKQLSETSRQGKKEFVAEIET 428
+TY EL AT FS ANLLG+GG+G V+KG L DG+ VA+KQL + S QG++EF AE++
Sbjct: 30 FTYEELAVATNEFSDANLLGQGGFGFVHKGVLPDGTQVAVKQLRDGSGQGEREFQAEVDI 209
Query: 429 ISRVQHRNLVKLFGFCLEGNKPLLVYEYMESGSLDKALFGNGRLNLNWSTRYKICLGIAR 608
ISRV H++LV L G+C+ +K LLVYE++ + +L+ + G ++W +R +I LG A
Sbjct: 210 ISRVHHKHLVTLVGYCISEDKRLLVYEFVPNNTLEFHIHGRRGPTMDWPSRLRIALGSAN 389
Query: 609 GLAYLHEESSIRIVHRDIKASNVLLDATLNPKISDFG 719
GLAYLHE+ +I+HRDIKASN+LLD K++DFG
Sbjct: 390 GLAYLHEDCHPKIIHRDIKASNILLDYRCEAKVADFG 500
>gb|BM816134.1|BM816134 HC05B11_T3.ab1 HC Hordeum vulgare subsp. vulgare cDNA clone
HC05B11_T3.ab1 similar to Arabidopsis thaliana wak4
gene; wall-associated kinase 4. (AJ009695) [Oryza
sativa],Similar to wak1 gene (AJ009696) [Oryza
sativa],putative wall-associated kinase 2 [Oryza
sativa],serine/threonine protein kinase [Oryza sativa
subsp. japonica], mRNA sequence
Length = 810
Score = 196 bits (423), Expect = 2e-049
Identities = 85/203 (41%), Positives = 126/203 (62%)
Frame = +3 / -1
Query: 261 ELRTATENFSSANLLGEGGYGSVYKGKLVDGSVVAIKQLSETSRQGKKEFVAEIETISRV 440
EL+ AT FS ++G GG+G+VY+G L VA+K+ Q KKEF E+ ++++
Sbjct: 612 ELQQATNRFSEEQVIGRGGHGTVYRGLLKSNVEVAVKRCMTIDEQHKKEFGKEMLILAQI 433
Query: 441 QHRNLVKLFGFCLEGNKPLLVYEYMESGSLDKALFGNGRLNLNWSTRYKICLGIARGLAY 620
HRN+VKL G CLE P+LVYE++ +G+L + GN ++ +TR I A L+Y
Sbjct: 432 NHRNVVKLLGCCLEVEVPMLVYEFVPNGTLFDLIHGNHGWRISLATRLGIAHDSAEALSY 253
Query: 621 LHEESSIRIVHRDIKASNVLLDATLNPKISDFGLAKLYDDKKTHVSTKVAGTFGYLSPEY 800
LH +S I+H D+K+SN+LLD K+SDFG + L ++ T V GT GYL PEY
Sbjct: 252 LHSGASTPILHGDVKSSNILLDDNHKAKVSDFGASILAPTDESQFVTLVQGTCGYLDPEY 73
Query: 801 AMRGHMTEKVDIFAFGVVMLEII 869
+T+K D+++FGVV+LE++
Sbjct: 72 MQTCQLTDKSDVYSFGVVLLELL 4
>gb|BE558296.2|BE558296 HV_CEb0017B21f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0017B21f, mRNA sequence
Length = 800
Score = 91.8 bits (194), Expect(4) = 2e-049
Identities = 34/57 (59%), Positives = 46/57 (80%)
Frame = +3 / +3
Query: 564 LNWSTRYKICLGIARGLAYLHEESSIRIVHRDIKASNVLLDATLNPKISDFGLAKLY 734
L+W R I +GIA GL YLH+ S +R++HRD+K SN+LLD+T+N KISDFGLAK++
Sbjct: 228 LDWEKRLVIIVGIAEGLLYLHKHSRLRVIHRDLKPSNILLDSTMNAKISDFGLAKIF 398
Score = 75.3 bits (158), Expect(4) = 2e-049
Identities = 31/66 (46%), Positives = 45/66 (68%)
Frame = +3 / +3
Query: 360 VAIKQLSETSRQGKKEFVAEIETISRVQHRNLVKLFGFCLEGNKPLLVYEYMESGSLDKA 539
+A+K+L S QG EF E+E I+++QHRNLV+L G C +G + +LVYEY+ + SLD
Sbjct: 21 IAVKRLDSDSDQGFIEFKNEVELIAKLQHRNLVRLMGCCSQGEEKVLVYEYLPNKSLDFF 200
Query: 540 LFGNGR 557
+F R
Sbjct: 201 IFDEDR 218
Score = 62.9 bits (131), Expect(4) = 2e-049
Identities = 23/41 (56%), Positives = 33/41 (80%)
Frame = +3 / +3
Query: 762 KVAGTFGYLSPEYAMRGHMTEKVDIFAFGVVMLEIIAGRPN 884
KV GT+GY++PEYA G + K D+F+FGV++LEII+G+ N
Sbjct: 432 KVVGTYGYMAPEYASHGLFSVKSDVFSFGVLVLEIISGKKN 554
Score = 23.1 bits (44), Expect(4) = 2e-049
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +3 / +3
Query: 918 LLXWVWQLYEEDHPLDIADPKL 983
L+ + WQL+EE+ I D L
Sbjct: 582 LIGYAWQLFEEERWDRIVDAAL 647
>gb|BU998515.1|BU998515 HI11E21r HI Hordeum vulgare subsp. vulgare cDNA clone HI11E21
5-PRIME, mRNA sequence
Length = 671
Score = 80.8 bits (170), Expect(5) = 3e-049
Identities = 31/65 (47%), Positives = 48/65 (73%)
Frame = +3 / +1
Query: 351 GSVVAIKQLSETSRQGKKEFVAEIETISRVQHRNLVKLFGFCLEGNKPLLVYEYMESGSL 530
G V+A+K+L++ S QG +E++AE+ + ++ H NLVKL G+C+E + LLVYE+M GSL
Sbjct: 181 GMVIAVKKLNQESYQGHREWLAEVNYLGQLSHPNLVKLVGYCVEDEQRLLVYEFMPRGSL 360
Query: 531 DKALF 545
+ LF
Sbjct: 361 ENHLF 375
Score = 56.5 bits (117), Expect(5) = 3e-049
Identities = 23/50 (46%), Positives = 34/50 (68%)
Frame = +3 / +1
Query: 222 IVRIPNVFCYTYGELRTATENFSSANLLGEGGYGSVYKGKLVDGSVVAIK 371
I+ NV +T+ ELRTAT NF ++LGEGG+GSV+KG + + ++ K
Sbjct: 22 ILESANVKAFTFNELRTATRNFRPDSVLGEGGFGSVFKGWIDEKTLAPTK 171
Score = 50.6 bits (104), Expect(5) = 3e-049
Identities = 18/30 (60%), Positives = 23/30 (76%)
Frame = +3 / +1
Query: 744 KTHVSTKVAGTFGYLSPEYAMRGHMTEKVD 833
K+HVST+V GT+GY +PEY GH+T K D
Sbjct: 580 KSHVSTRVMGTYGYAAPEYLATGHLTTKSD 669
Score = 47.8 bits (98), Expect(5) = 3e-049
Identities = 17/29 (58%), Positives = 24/29 (82%)
Frame = +3 / +1
Query: 642 RIVHRDIKASNVLLDATLNPKISDFGLAK 728
++++RD K SN+LLDA + K+SDFGLAK
Sbjct: 475 KVIYRDFKTSNILLDANYDAKLSDFGLAK 561
Score = 34.5 bits (69), Expect(5) = 3e-049
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +3 / +1
Query: 564 LNWSTRYKICLGIARGLAYLHEESS 638
L+W+ R KI G A+GLA+LH + +
Sbjct: 400 LSWNLRMKIAHGAAKGLAFLHSDKA 474
>gb|BJ469098.1|BJ469098 BJ469098 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal13c04 5', mRNA sequence
Length = 592
Score = 116 bits (248), Expect(2) = 3e-049
Identities = 46/72 (63%), Positives = 59/72 (81%)
Frame = +3 / +3
Query: 546 GNGRLNLNWSTRYKICLGIARGLAYLHEESSIRIVHRDIKASNVLLDATLNPKISDFGLA 725
G R+ L+W R++I LG+ARGL YLHEES ++I+HRDIKASNVLLD LNPKISDFG+A
Sbjct: 12 GXKRVQLDWPKRHQIILGLARGLLYLHEESPVKIIHRDIKASNVLLDEKLNPKISDFGMA 191
Query: 726 KLYDDKKTHVST 761
+L+ + THV+T
Sbjct: 192 RLFLEDATHVNT 227
Score = 99.6 bits (211), Expect(2) = 3e-049
Identities = 36/82 (43%), Positives = 59/82 (71%)
Frame = +3 / +3
Query: 762 KVAGTFGYLSPEYAMRGHMTEKVDIFAFGVVMLEIIAGRPNYDGKLDXXMAYLLXWVWQL 941
+++GT+GY++PEYAM G+++ K D+F+FG+++LEI++GR N D L LL + W+L
Sbjct: 231 RISGTYGYMAPEYAMNGYLSTKTDVFSFGMLVLEIVSGRKNIDRHLGDEKVDLLNYTWKL 410
Query: 942 YEEDHPLDIADPKLTXFDSXEL 1007
EE L+I DP L+ +D+ E+
Sbjct: 411 SEEGRSLEIVDPGLSGWDAGEV 476
>gb|BQ763863.1|BQ763863 EBro03_SQ005_I18_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ005_I18 5', mRNA sequence
Length = 614
Score = 99.6 bits (211), Expect(3) = 7e-049
Identities = 40/83 (48%), Positives = 58/83 (69%)
Frame = +3 / +1
Query: 318 YGSVYKGKLVDGSVVAIKQLSETSRQGKKEFVAEIETISRVQHRNLVKLFGFCLEGNKPL 497
+G VYK +L DG VVAIK+L S QG +EF AE+ETI +++HRNLV L G+C G + L
Sbjct: 1 FGDVYKAQLKDGRVVAIKKLIHVSGQGDREFTAEMETIGKIKHRNLVPLLGYCKIGEERL 180
Query: 498 LVYEYMESGSLDKALFGNGRLNL 566
L+Y++M+ GSL+ L ++ +
Sbjct: 181 LMYDFMKYGSLEDVLHDRKKIGV 249
Score = 81.3 bits (171), Expect(3) = 7e-049
Identities = 30/58 (51%), Positives = 43/58 (74%)
Frame = +3 / +1
Query: 558 LNLNWSTRYKICLGIARGLAYLHEESSIRIVHRDIKASNVLLDATLNPKISDFGLAKL 731
+ LNW+ R KI +G ARGLA+LH I+HRD+K+SNVL+D L ++SDFG+A++
Sbjct: 247 VRLNWAARRKIAIGAARGLAFLHHNCIPHIIHRDMKSSNVLVDENLEARVSDFGMARM 420
Score = 52.4 bits (108), Expect(3) = 7e-049
Identities = 19/45 (42%), Positives = 31/45 (68%)
Frame = +3 / +2
Query: 765 VAGTFGYLSPEYAMRGHMTEKVDIFAFGVVMLEIIAGRPNYDGKL 899
+AGT GY+ PEY T K D++++GVV+LE++ G+P D ++
Sbjct: 458 LAGTPGYVPPEYYQSFRCTTKGDVYSYGVVLLELLTGKPPTDSQI 592
>gb|BJ468873.1|BJ468873 BJ468873 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd27k16 5', mRNA sequence
Length = 528
Score = 161 bits (347), Expect(2) = 1e-048
Identities = 67/134 (50%), Positives = 94/134 (70%)
Frame = +3 / +3
Query: 327 VYKGKLVDGSVVAIKQLSETSRQGKKEFVAEIETISRVQHRNLVKLFGFCLEGNKPLLVY 506
VYK L D + VA+K+ ++ S QG +EF EIE +S ++HR+LV L G+C E N+ +LVY
Sbjct: 6 VYKAVLQDSTKVAVKRGNQKSHQGLREFRTEIELLSGLRHRHLVSLIGYCDEQNEMILVY 185
Query: 507 EYMESGSLDKALFGNGRLNLNWSTRYKICLGIARGLAYLHEESSIRIVHRDIKASNVLLD 686
EYME G+L L+G+ L+W R +IC+G ARGL YLH + I+HRD+K++N+LLD
Sbjct: 186 EYMEKGTLKSHLYGSDMPPLSWKKRVEICIGAARGLHYLHTGFAKSIIHRDVKSANILLD 365
Query: 687 ATLNPKISDFGLAK 728
L K+SDFGL+K
Sbjct: 366 ENLMAKVSDFGLSK 407
Score = 52.4 bits (108), Expect(2) = 1e-048
Identities = 19/34 (55%), Positives = 26/34 (76%)
Frame = +3 / +3
Query: 744 KTHVSTKVAGTFGYLSPEYAMRGHMTEKVDIFAF 845
+THVST V G+FGYL PEY R +T+K D+++F
Sbjct: 426 QTHVSTAVKGSFGYLDPEYYRRQKLTDKSDVYSF 527
>gb|BQ465888.1|BQ465888 HU04P13r HU Hordeum vulgare subsp. vulgare cDNA clone HU04P13
5-PRIME, mRNA sequence
Length = 580
Score = 126 bits (269), Expect(3) = 1e-048
Identities = 49/99 (49%), Positives = 69/99 (69%)
Frame = +3 / +2
Query: 543 FGNGRLNLNWSTRYKICLGIARGLAYLHEESSIRIVHRDIKASNVLLDATLNPKISDFGL 722
F G L+W+ R ++ +G ARGL YLHE + +I+HRD+KA+NVLLD P + DFGL
Sbjct: 284 FKPGEPVLDWNARKRVAIGTARGLEYLHEHCNPKIIHRDVKAANVLLDEGFEPVVGDFGL 463
Query: 723 AKLYDDKKTHVSTKVAGTFGYLSPEYAMRGHMTEKVDIF 839
AKL D +KT V+T+V GT G+++PEY G +E+ D+F
Sbjct: 464 AKLVDVQKTSVTTQVRGTMGHIAPEYLSTGKSSERTDVF 580
Score = 56.5 bits (117), Expect(3) = 1e-048
Identities = 20/40 (50%), Positives = 30/40 (75%)
Frame = +3 / +2
Query: 279 ENFSSANLLGEGGYGSVYKGKLVDGSVVAIKQLSETSRQG 398
+NFS N+LG+GG+G VYKG L DG+ +A+K+L++ G
Sbjct: 11 DNFSEKNVLGQGGFGKVYKGSLPDGTKIAVKRLTDYESPG 130
Score = 49.6 bits (102), Expect(3) = 1e-048
Identities = 20/45 (44%), Positives = 30/45 (66%)
Frame = +3 / +2
Query: 396 GKKEFVAEIETISRVQHRNLVKLFGFCLEGNKPLLVYEYMESGSL 530
G+ F+ E+E IS HRNL++L GFC + LLVY +M++ S+
Sbjct: 131 GEAAFLREVELISVAVHRNLLRLIGFCTTQTERLLVYPFMQNLSV 265
>gb|BF260967.2|BF260967 HVSMEf0023G15f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0023G15f, mRNA sequence
Length = 756
Score = 132 bits (283), Expect(3) = 5e-048
Identities = 54/114 (47%), Positives = 75/114 (65%)
Frame = +3 / +3
Query: 408 FVAEIETISRVQHRNLVKLFGFCLEGNKPLLVYEYMESGSLDKALFGNGRLNLNWSTRYK 587
F AEI+T+ R+QHR +V+L G C LLVYE M +GSL + L G +L+W T+YK
Sbjct: 264 FSAEIQTLGRIQHRYIVRLLGLCSNNKTNLLVYESMPNGSLGELLHGKKGGHLHWDTQYK 443
Query: 588 ICLGIARGLAYLHEESSIRIVHRDIKASNVLLDATLNPKISDFGLAKLYDDKKT 749
I + A+GL YLH + S I+HRD+K++N+LLD+ ++DFGLAK D T
Sbjct: 444 IAVEAAKGLCYLHHDCSPPILHRDVKSNNILLDSDFEAHVADFGLAKFLQDSGT 605
Score = 53.8 bits (111), Expect(3) = 5e-048
Identities = 20/55 (36%), Positives = 35/55 (63%)
Frame = +3 / +3
Query: 729 LYDDKKTHVSTKVAGTFGYLSPEYAMRGHMTEKVDIFAFGVVMLEIIAGRPNYDG 893
L D + + +AG++GY++PEYA + EK D+++FG ++LE+I G+ G
Sbjct: 588 LQDSGTSECMSAIAGSYGYIAPEYAYTFKVDEKSDVYSFGGMVLELITGKKPVGG 752
Score = 44.1 bits (90), Expect(3) = 5e-048
Identities = 17/38 (44%), Positives = 26/38 (68%)
Frame = +3 / +3
Query: 279 ENFSSANLLGEGGYGSVYKGKLVDGSVVAIKQLSETSR 392
++ N++G+GG +VYKG + DG VA+K+LS SR
Sbjct: 129 DSLKEENMIGKGGARTVYKGTMPDGDHVAVKRLSTMSR 242
>gb|BF260669.2|BF260669 HVSMEf0022K01f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0022K01f, mRNA sequence
Length = 539
Score = 98.7 bits (209), Expect(3) = 9e-048
Identities = 38/60 (63%), Positives = 47/60 (78%)
Frame = +3 / +1
Query: 555 RLNLNWSTRYKICLGIARGLAYLHEESSIRIVHRDIKASNVLLDATLNPKISDFGLAKLY 734
R L W R++I GI RGL YLHE+S + I+HRD+KASN+LLD +NPKISDFGLAKL+
Sbjct: 184 RQELTWGHRFRIIQGIGRGLLYLHEDSRLTIIHRDLKASNILLDPDMNPKISDFGLAKLF 363
Score = 68.9 bits (144), Expect(3) = 9e-048
Identities = 28/61 (45%), Positives = 43/61 (70%)
Frame = +3 / +1
Query: 375 LSETSRQGKKEFVAEIETISRVQHRNLVKLFGFCLEGNKPLLVYEYMESGSLDKALFGNG 554
LS+TS+QG E E+ ++++QH+NLV+L G C++ + LLVYE++ + SLDK LF
Sbjct: 1 LSKTSQQGLVEMRNEVVLVAKLQHKNLVRLLGCCIQEQEMLLVYEFLPNRSLDKILFDPA 180
Query: 555 R 557
R
Sbjct: 181 R 183
Score = 62.0 bits (129), Expect(3) = 9e-048
Identities = 21/41 (51%), Positives = 35/41 (85%)
Frame = +3 / +1
Query: 756 STKVAGTFGYLSPEYAMRGHMTEKVDIFAFGVVMLEIIAGR 878
++ +AGT+GY++PEYA+ G + K D++++GV++LEIIAGR
Sbjct: 388 TSHIAGTYGYMAPEYALHGIFSAKSDVYSYGVLVLEIIAGR 510
>gb|CA031139.1|CA031139 HX09C02r HX Hordeum vulgare subsp. vulgare cDNA clone HX09C02
5-PRIME, mRNA sequence
Length = 609
Score = 126 bits (269), Expect(2) = 2e-047
Identities = 48/100 (48%), Positives = 73/100 (73%)
Frame = +3 / +3
Query: 249 YTYGELRTATENFSSANLLGEGGYGSVYKGKLVDGSVVAIKQLSETSRQGKKEFVAEIET 428
+T +L AT FS N++GEGGYG VY+G++V+G+ VA+K+L Q +KEF E+E
Sbjct: 102 FTLRDLELATNRFSKDNIIGEGGYGVVYRGEIVNGTPVAVKKLLNNLGQAEKEFRVEVEA 281
Query: 429 ISRVQHRNLVKLFGFCLEGNKPLLVYEYMESGSLDKALFG 548
I V+H+NLV+L G+C+EG + +LVYEY+ +G+L++ L G
Sbjct: 282 IGHVRHKNLVRLLGYCVEGTQRILVYEYVNNGNLEQWLHG 401
Score = 84.0 bits (177), Expect(2) = 2e-047
Identities = 34/59 (57%), Positives = 43/59 (72%)
Frame = +3 / +3
Query: 555 RLNLNWSTRYKICLGIARGLAYLHEESSIRIVHRDIKASNVLLDATLNPKISDFGLAKL 731
R +L W R KI LG A+ LAYLHE ++VHRDIK+SN+L+D + K+SDFGLAKL
Sbjct: 414 RGSLTWEARIKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDDDFDAKVSDFGLAKL 590
>gb|BM376497.2|BM376497 EBem05_SQ002_G09_R embryo, 14 DPA, no treatment, cv Optic, EBem05
Hordeum vulgare subsp. vulgare cDNA clone
EBem05_SQ002_G09 5', mRNA sequence
Length = 522
Score = 128 bits (274), Expect(2) = 5e-047
Identities = 51/91 (56%), Positives = 68/91 (74%)
Frame = +3 / +3
Query: 564 LNWSTRYKICLGIARGLAYLHEESSIRIVHRDIKASNVLLDATLNPKISDFGLAKLYDDK 743
L++ TR KI LG ARGLAYLHE+++ ++HRD KASNVLL+ K++DFGLAK +
Sbjct: 249 LDFDTRMKIALGAARGLAYLHEDANPHVIHRDFKASNVLLENDFTAKVADFGLAKEASEG 428
Query: 744 KTHVSTKVAGTFGYLSPEYAMRGHMTEKVDI 836
H+ST+V GTFGY++PEYAM GH+ K D+
Sbjct: 429 IEHISTQVMGTFGYVAPEYAMTGHLLVKSDV 521
Score = 80.3 bits (169), Expect(2) = 5e-047
Identities = 32/78 (41%), Positives = 52/78 (66%)
Frame = +3 / +3
Query: 327 VYKGKLVDGSVVAIKQLSETSRQGKKEFVAEIETISRVQHRNLVKLFGFCLEGNKPLLVY 506
VY+G + DG VA+K L+ + +EF+AE+E +SR+ HRNLVK+ G C+E LV+
Sbjct: 6 VYRGIVQDGVEVAVKLLTGKHQNRDREFIAEVEMLSRLHHRNLVKMIGICVERRTRCLVF 185
Query: 507 EYMESGSLDKALFGNGRL 560
E + +GS++ L G+ ++
Sbjct: 186 ELVPNGSVESHLHGSDKI 239
>emb|AJ630116.2| Hordeum vulgare subsp. vulgare mRNA for LysM receptor-like kinase,
clone Chromi1
Length = 2119
Score = 144 bits (308), Expect(3) = 6e-047
Identities = 58/127 (45%), Positives = 85/127 (66%)
Frame = +3 / +3
Query: 498 LVYEYMESGSLDKALFGNGRLNLNWSTRYKICLGIARGLAYLHEESSIRIVHRDIKASNV 677
LVYE++E+G+L + L G G L+W R +I L ARGL Y+HE + +HRDIK++N+
Sbjct: 1224 LVYEFIENGNLSQHLRGTGYEPLSWVERVQIALDSARGLEYIHEHTVPVYIHRDIKSANI 1403
Query: 678 LLDATLNPKISDFGLAKLYDDKKTHVSTKVAGTFGYLSPEYAMRGHMTEKVDIFAFGVVM 857
L+D K++DFGL KL + T+V GTFGY+ PEY G ++ KVD++AFGVV+
Sbjct: 1404 LIDKNTRAKVADFGLTKLTEVGGASXQTRVVGTFGYMPPEYVRYGDVSRKVDVYAFGVVL 1583
Query: 858 LEIIAGR 878
E+I+ +
Sbjct: 1584 YELISAK 1604
Score = 42.3 bits (86), Expect(3) = 6e-047
Identities = 14/38 (36%), Positives = 25/38 (65%)
Frame = +3 / +3
Query: 375 LSETSRQGKKEFVAEIETISRVQHRNLVKLFGFCLEGN 488
+ + Q +EF+AE++ ++ V H NLV+L G+C E +
Sbjct: 1104 IKKMDMQATQEFLAELKVLTHVHHLNLVRLIGYCTESS 1217
Score = 40.5 bits (82), Expect(3) = 6e-047
Identities = 15/32 (46%), Positives = 23/32 (71%)
Frame = +3 / +3
Query: 249 YTYGELRTATENFSSANLLGEGGYGSVYKGKL 344
+TY EL ATE F+ + +G+GG+G+VY +L
Sbjct: 990 FTYQELFNATEGFNIIHKIGQGGFGAVYYAEL 1085
>gb|BJ462905.1|BJ462905 BJ462905 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags24n16 5', mRNA sequence
Length = 634
Score = 83.5 bits (176), Expect(3) = 8e-047
Identities = 33/55 (60%), Positives = 42/55 (76%)
Frame = +3 / +3
Query: 564 LNWSTRYKICLGIARGLAYLHEESSIRIVHRDIKASNVLLDATLNPKISDFGLAK 728
L W+ R KI LG A+GLA+LHEE+ +++RD K SN+LLDA N K+SDFGLAK
Sbjct: 153 LPWAIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAEYNAKLSDFGLAK 317
Score = 82.6 bits (174), Expect(3) = 8e-047
Identities = 31/62 (50%), Positives = 44/62 (70%)
Frame = +3 / +3
Query: 744 KTHVSTKVAGTFGYLSPEYAMRGHMTEKVDIFAFGVVMLEIIAGRPNYDGKLDXXMAYLL 923
KTHVST+V GT+GY +PEY M GH+T K D+++FGVV+LE+++GR + D L+
Sbjct: 336 KTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMMSGRRSMDKNRPNGEHNLV 515
Query: 924 XW 929
W
Sbjct: 516 EW 521
Score = 60.2 bits (125), Expect(3) = 8e-047
Identities = 23/45 (51%), Positives = 34/45 (75%)
Frame = +3 / +3
Query: 411 VAEIETISRVQHRNLVKLFGFCLEGNKPLLVYEYMESGSLDKALF 545
VAE++ + +QH +LVKL G+C+E ++ LLVYE+M GSL+ LF
Sbjct: 3 VAEVDFLGNLQHPHLVKLVGYCIEDDQRLLVYEFMPRGSLENHLF 137
>gb|BM372170.2|BM372170 EBro03_SQ004_D12_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ004_D12 5', mRNA sequence
Length = 575
Score = 122 bits (262), Expect(2) = 3e-046
Identities = 51/94 (54%), Positives = 69/94 (73%)
Frame = +3 / +3
Query: 270 TATENFSSANLLGEGGYGSVYKGKLVDGSVVAIKQLSETSRQGKKEFVAEIETISRVQHR 449
+AT+NF+ N +G GG+G VYKG L + VA+K LS SRQG +EF+ EI+ IS V+H
Sbjct: 126 SATDNFNHNNKVGRGGFGIVYKGTLQNKQDVAVKGLSAESRQGIREFLTEIDVISNVKHP 305
Query: 450 NLVKLFGFCLEGNKPLLVYEYMESGSLDKALFGN 551
NLV+L G C+E N +LVYEY+E+ SLD+AL G+
Sbjct: 306 NLVELIGCCVEANNRILVYEYLENSSLDRALLGS 407
Score = 83.1 bits (175), Expect(2) = 3e-046
Identities = 33/51 (64%), Positives = 37/51 (72%)
Frame = +3 / +3
Query: 561 NLNWSTRYKICLGIARGLAYLHEESSIRIVHRDIKASNVLLDATLNPKISD 713
N WS R IC+G+ARGLAYLHEE IVHRDIKASN+L+D PKI D
Sbjct: 423 NFTWSVRSSICIGVARGLAYLHEEIPSPIVHRDIKASNILMDKNYVPKIGD 575
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 412,899,266
Number of Sequences: 312970
Number of extensions: 5904761
Number of successful extensions: 26172
Number of sequences better than 1.0e-020: 448
length of database: 58,378,179
effective HSP length: 53
effective length of database: 41,790,769
effective search space used: 13498418387
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)