TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QAE20c02.yg.2.1
(696 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BQ764926.1|BQ764926 EBca01_SQ005_E07_R carpel, pre-anthe... 374 e-103
gb|BJ463364.1|BJ463364 BJ463364 K. Sato unpublished cDNA li... 359 7e-099
gb|BE231065.1|BE231065 HVSMEg0016D19f Hordeum vulgare pre-a... 345 2e-094
gb|BJ465257.1|BJ465257 BJ465257 K. Sato unpublished cDNA li... 332 1e-090
gb|BU994352.1|BU994352 HM06L21r HM Hordeum vulgare subsp. v... 330 5e-090
gb|BF261097.2|BF261097 HVSMEf0023M01f Hordeum vulgare seedl... 320 4e-087
gb|AV917011.1|AV917011 AV917011 K. Sato unpublished cDNA li... 320 5e-087
gb|AV915505.1|AV915505 AV915505 K. Sato unpublished cDNA li... 303 7e-082
gb|AV912838.1|AV912838 AV912838 K. Sato unpublished cDNA li... 303 9e-082
gb|AV913558.1|AV913558 AV913558 K. Sato unpublished cDNA li... 296 8e-080
gb|AV916601.1|AV916601 AV916601 K. Sato unpublished cDNA li... 294 4e-079
gb|BU970797.1|BU970797 HB15L12r BC Hordeum vulgare subsp. v... 288 2e-077
gb|BQ464272.1|BQ464272 HF01M24T HF Hordeum vulgare subsp. v... 281 2e-075
gb|BI948619.1|BI948619 HVSMEl0010E10f Hordeum vulgare spike... 274 5e-073
gb|AV916609.1|AV916609 AV916609 K. Sato unpublished cDNA li... 273 9e-073
gb|BJ464778.1|BJ464778 BJ464778 K. Sato unpublished cDNA li... 272 1e-072
gb|BJ464115.1|BJ464115 BJ464115 K. Sato unpublished cDNA li... 263 2e-072
gb|BG367505.2|BG367505 HVSMEi0012I04f Hordeum vulgare 20 DA... 268 3e-071
gb|AV914116.1|AV914116 AV914116 K. Sato unpublished cDNA li... 264 5e-070
gb|AV917009.1|AV917009 AV917009 K. Sato unpublished cDNA li... 261 2e-069
gb|BU986567.1|BU986567 HF12E04r HF Hordeum vulgare subsp. v... 248 3e-065
gb|BE196433.2|BE196433 HVSMEh0092E14f Hordeum vulgare 5-45 ... 154 4e-065
gb|BU997130.1|BU997130 HI07A02r HI Hordeum vulgare subsp. v... 245 2e-064
gb|BJ462547.1|BJ462547 BJ462547 K. Sato unpublished cDNA li... 240 5e-063
gb|BU986160.1|BU986160 HF09N16r HF Hordeum vulgare subsp. v... 235 2e-061
gb|BU988606.1|BU988606 HF18C11r HF Hordeum vulgare subsp. v... 234 3e-061
gb|BU976210.1|BU976210 HA03F10r HA Hordeum vulgare subsp. v... 231 4e-060
gb|BE195060.3|BE195060 HVSMEh0088D01f Hordeum vulgare 5-45 ... 216 1e-055
gb|CA026968.1|CA026968 HZ57H22r HZ Hordeum vulgare subsp. v... 205 2e-052
gb|AV915968.1|AV915968 AV915968 K. Sato unpublished cDNA li... 196 3e-052
gb|BM441924.2|BM441924 EBed07_SQ001_O24_R endosperm, 28 DPA... 198 3e-050
gb|BJ462494.1|BJ462494 BJ462494 K. Sato unpublished cDNA li... 196 3e-050
gb|CB858437.1|CB858437 HI07A02w HI Hordeum vulgare subsp. v... 194 5e-049
gb|BG368358.1|BG368358 HVSMEi0017P04f Hordeum vulgare 20 DA... 188 4e-048
gb|AV932210.1|AV932210 AV932210 K. Sato unpublished cDNA li... 160 4e-047
gb|BJ547617.1|BJ547617 BJ547617 K. Sato unpublished cDNA li... 160 4e-047
gb|BJ547606.1|BJ547606 BJ547606 K. Sato unpublished cDNA li... 160 4e-047
gb|BQ472678.1|BQ472678 HB01N04r BC Hordeum vulgare subsp. v... 158 1e-046
gb|BQ468641.1|BQ468641 HM01N16T HM Hordeum vulgare subsp. v... 185 2e-046
gb|AV916387.1|AV916387 AV916387 K. Sato unpublished cDNA li... 184 4e-046
gb|BQ464194.1|BQ464194 HF01J17T HF Hordeum vulgare subsp. v... 155 6e-046
gb|BI947961.1|BI947961 HVSMEl0007J23f Hordeum vulgare spike... 155 1e-045
gb|BI952746.1|BI952746 HVSMEm0007J23f Hordeum vulgare green... 155 1e-045
gb|CK122337.1|CK122337 BES1824102p02 BES1824 Hordeum vulgar... 112 2e-045
gb|BJ547686.1|BJ547686 BJ547686 K. Sato unpublished cDNA li... 160 2e-045
gb|BJ462621.1|BJ462621 BJ462621 K. Sato unpublished cDNA li... 180 6e-045
gb|BU998469.1|BU998469 HI11C15r HI Hordeum vulgare subsp. v... 156 1e-043
gb|BU984656.1|BU984656 HF04J11r HF Hordeum vulgare subsp. v... 147 1e-043
gb|BQ469152.1|BQ469152 HM03J01r HM Hordeum vulgare subsp. v... 174 4e-043
gb|BQ471321.1|BQ471321 HV02B13r HV Hordeum vulgare subsp. v... 154 5e-043
gb|BU978697.1|BU978697 HA14A09r HA Hordeum vulgare subsp. v... 172 1e-042
gb|BE422156.1|BE422156 HWM020cG.09r ITEC HWM Barley Leaf Li... 171 3e-042
gb|AV912902.1|AV912902 AV912902 K. Sato unpublished cDNA li... 90 7e-042
gb|BQ758950.1|BQ758950 EBma07_SQ003_G09_R maternal, 21 DPA,... 166 9e-041
gb|BQ472621.1|BQ472621 HB01P17r BC Hordeum vulgare subsp. v... 135 9e-040
gb|BG417583.2|BG417583 HVSMEk0018E23f Hordeum vulgare testa... 160 1e-038
gb|BQ766937.1|BQ766937 EBro08_SQ007_D17_R root, 3 week, dro... 160 1e-038
gb|BU972640.1|BU972640 HB22E11r BC Hordeum vulgare subsp. v... 159 1e-038
gb|BJ465335.1|BJ465335 BJ465335 K. Sato unpublished cDNA li... 157 7e-038
gb|BU986367.1|BU986367 HF11J16r HF Hordeum vulgare subsp. v... 157 7e-038
gb|BJ452216.1|BJ452216 BJ452216 K. Sato unpublished cDNA li... 155 2e-037
gb|BI955975.1|BI955975 HVSMEm0025E04f Hordeum vulgare green... 127 2e-037
gb|BQ755335.1|BQ755335 EBed07_SQ002_G10_R endosperm, 28 DPA... 153 9e-037
gb|BG301295.1|BG301295 HVSMEb0020I16f Hordeum vulgare seedl... 138 2e-036
gb|AV914656.1|AV914656 AV914656 K. Sato unpublished cDNA li... 150 8e-036
gb|BJ464911.1|BJ464911 BJ464911 K. Sato unpublished cDNA li... 149 1e-035
gb|AV924652.1|AV924652 AV924652 K. Sato unpublished cDNA li... 149 1e-035
gb|BF263416.3|BF263416 HV_CEa0006L01f Hordeum vulgare seedl... 142 2e-033
gb|AV914877.1|AV914877 AV914877 K. Sato unpublished cDNA li... 100 4e-033
gb|CA008162.1|CA008162 HU10B07r HU Hordeum vulgare subsp. v... 111 8e-033
gb|BJ451325.1|BJ451325 BJ451325 K. Sato unpublished cDNA li... 110 5e-032
gb|BG300683.1|BG300683 HVSMEb0017P19f Hordeum vulgare seedl... 87 7e-032
gb|BF253874.2|BF253874 HVSMEf0002F19f Hordeum vulgare seedl... 132 2e-030
gb|BJ467710.1|BJ467710 BJ467710 K. Sato unpublished cDNA li... 131 4e-030
gb|BU995874.1|BU995874 HM11K09r HM Hordeum vulgare subsp. v... 102 4e-030
gb|AV917900.1|AV917900 AV917900 K. Sato unpublished cDNA li... 129 2e-029
gb|BJ547681.1|BJ547681 BJ547681 K. Sato unpublished cDNA li... 105 4e-029
gb|BJ468501.1|BJ468501 BJ468501 K. Sato unpublished cDNA li... 127 6e-029
gb|BI947104.1|BI947104 HVSMEl0003L04f Hordeum vulgare spike... 99 7e-029
gb|BJ544802.1|BJ544802 BJ544802 K. Sato unpublished cDNA li... 119 1e-026
gb|BU997151.1|BU997151 HI07B06r HI Hordeum vulgare subsp. v... 118 3e-026
gb|BE194623.2|BE194623 HVSMEh0086E10f Hordeum vulgare 5-45 ... 95 1e-025
gb|BJ467618.1|BJ467618 BJ467618 K. Sato unpublished cDNA li... 114 5e-025
gb|AV913514.1|AV913514 AV913514 K. Sato unpublished cDNA li... 85 7e-025
gb|AL450905.1|AL450905 AL450905 Hordeum vulgare Barke etiol... 95 7e-025
gb|BM100114.2|BM100114 EBma01_SQ001_D19_R maternal, 4 DPA, ... 113 9e-025
gb|AV919161.1|AV919161 AV919161 K. Sato unpublished cDNA li... 67 9e-025
gb|CA027495.1|CA027495 HZ59B20r HZ Hordeum vulgare subsp. v... 113 1e-024
gb|BQ755347.1|BQ755347 EBed07_SQ002_J07_R endosperm, 28 DPA... 111 3e-024
gb|BU986792.1|BU986792 HF12O16r HF Hordeum vulgare subsp. v... 111 3e-024
gb|BI947342.1|BI947342 HVSMEl0005D04f Hordeum vulgare spike... 110 8e-024
gb|AV918128.1|AV918128 AV918128 K. Sato unpublished cDNA li... 110 8e-024
gb|BJ466393.1|BJ466393 BJ466393 K. Sato unpublished cDNA li... 110 8e-024
gb|BI951286.1|BI951286 HVSMEl0025F23f Hordeum vulgare spike... 86 8e-024
gb|AV917579.1|AV917579 AV917579 K. Sato unpublished cDNA li... 109 2e-023
gb|BM373123.2|BM373123 EBma04_SQ003_D03_R maternal, 10 DPA,... 108 3e-023
gb|AV917200.1|AV917200 AV917200 K. Sato unpublished cDNA li... 107 7e-023
gb|AV914017.1|AV914017 AV914017 K. Sato unpublished cDNA li... 106 1e-022
gb|BG301241.1|BG301241 HVSMEb0020C10f Hordeum vulgare seedl... 105 2e-022
gb|BE601754.2|BE601754 HVSMEh0099G19f Hordeum vulgare 5-45 ... 103 9e-022
gb|BF254222.2|BF254222 HVSMEf0003F20f Hordeum vulgare seedl... 67 2e-021
gb|BJ463709.1|BJ463709 BJ463709 K. Sato unpublished cDNA li... 101 3e-021
gb|BU984559.1|BU984559 HF04E16r HF Hordeum vulgare subsp. v... 100 6e-021
gb|AV920604.1|AV920604 AV920604 K. Sato unpublished cDNA li... 80 8e-021
>gb|BQ764926.1|BQ764926 EBca01_SQ005_E07_R carpel, pre-anthesis, no treatment, cv Optic,
EBca01 Hordeum vulgare subsp. vulgare cDNA clone
EBca01_SQ005_E07 5', mRNA sequence
Length = 715
Score = 374 bits (810), Expect = e-103
Identities = 150/223 (67%), Positives = 169/223 (75%)
Frame = -3 / +1
Query: 685 DYAXXXFKTXXXRVKXWXXLXEPRIVAXXGYDKGLXPPXXCTQCTAXXNSSTEPYIVVHN 506
DYA FKT RVK W EPRIVA GYD G PP C++CTA NS+TEPYIV HN
Sbjct: 7 DYADFCFKTFGDRVKHWFTFNEPRIVALLGYDVGSNPPQRCSKCTAGGNSATEPYIVAHN 186
Query: 505 ILLSHATAVARYRNKYQATQKGKVGIVLDFNWYEPFTNSTEDQKAAQRARDFHIGWFLDP 326
LL+H AVARYR KYQA QKGKVGIVLDFNWYE TNSTEDQ AAQRARDFH+GWF+DP
Sbjct: 187 FLLAHGYAVARYRTKYQAAQKGKVGIVLDFNWYEALTNSTEDQAAAQRARDFHVGWFVDP 366
Query: 325 LINGQYPKIMQDIVKDRLPSFTPEQAKLVKGSSDYFGINQYTTYYIADQQTPPQGPPSYS 146
LING YP+IMQD+VK+RLP FTP +AK+V GS+DY GINQYT + Q+ Q P SYS
Sbjct: 367 LINGHYPQIMQDLVKERLPKFTPAEAKMVMGSADYIGINQYTASLMKGQKLLQQTPTSYS 546
Query: 145 SDWGVQYYFQRNGVQIGQMAHSIWLYIVPSGMYGVVNYLKEKY 17
+DW V Y F+RNG IG A+S WLYIVPSGMYG V+YL +KY
Sbjct: 547 ADWQVTYAFERNGKPIGPKANSNWLYIVPSGMYGCVHYLSQKY 675
Score = 262 bits (567), Expect = 1e-069
Identities = 140/223 (62%), Positives = 150/223 (67%)
Frame = +3 / -3
Query: 18 YFSFR*FTTPYMPDGTM*SQIECAICPICTPFL*K*YWTPQSDE*LGGPCGGVC*SAM*Y 197
YF R* T PY+PDGTM*SQ E A PI PFL K T QS E*L G C M
Sbjct: 674 YFWLR*CTHPYIPDGTM*SQFEFAFGPIGLPFLSKA*VTCQSAE*LVGVCCSNFWPFMRL 495
Query: 198 VVY*LIPK*SDEPLTSLACSGVKLGSRSFTMSCIIFGYCPFINGSRNQPIWKSLALCAAF 377
VY*LIP *S EP+T LA +GV LG+ SFT SCII G CPFI+GS NQP WKSLAL AA
Sbjct: 494 AVY*LIPI*SAEPMTILASAGVNLGNLSFTRSCIICG*CPFISGSTNQPTWKSLAL*AAA 315
Query: 378 *SSVEFVKGSYQLKSRTIPTLPF*VAWYLLRYLATAVA*DRRML*TTM*GSVDEFXXAVH 557
SSVE V+ SYQLKSRTIPT PF* A YL+RYLATA +R L* TM*GSV EF AVH
Sbjct: 314 WSSVELVRASYQLKSRTIPTFPF*AA*YLVRYLATA*PCAKRKL*ATM*GSVAEFPPAVH 135
Query: 558 CVHXXGGXSPLS*PXNATILGSXNXXQXLTRXXXVLKXXSA*S 686
+H GG P S*P +ATILGS N Q TR VLK SA*S
Sbjct: 134 LLHL*GGFDPTS*PRSATILGSLNVNQCFTRSPKVLKQKSA*S 6
Score = 196 bits (423), Expect = 9e-050
Identities = 100/222 (45%), Positives = 125/222 (56%)
Frame = -2 / +3
Query: 683 LC*XXFQDXXXSSQXLXXIX*AKDSSIXWL**RAXPPXXVHTMHCXXELIDRTLHCCS*H 504
LC* F D S + L I * KDS WL R V MHC EL +RTLHCCS
Sbjct: 9 LC*LLF*DLWRSCKALVYIQ*TKDSCASWLRRRVESSSKVQQMHCRWELSNRTLHCCSQF 188
Query: 503 SPISCYCSCKIPQ*IPGNSERQGRDSS*LQLV*TFYKLN*RSKSSAKGQGLPYWLVS*SI 324
S + CSCKIP + G+SE +G SS QLV Y+LN*R SS+K QGLP WLV
Sbjct: 189 SLSTRLCSCKIPDQVSGSSEGEGWYSSGFQLVRGSYQLN*RPSSSSKSQGLPCWLVCRPA 368
Query: 323 NKWAISKDNARHCERPATKFHT*TGQASQGLIRLFRDQSIYYILHCRSTNSSAGTTELLV 144
+K A+ DNAR CER + H+ GL L+ DQS++ H ++A +L
Sbjct: 369 DKRALPTDNARPCEREVAQVHSC*S*NGHGLRGLYWDQSVHS*PHEGPEIAAADADQLFS 548
Query: 143 RLGRPILLSKEWRANWTDGALNLALHRPIGHVWSRELPKGKV 18
RL + L ++W+A+WT G LALHRPIG VW R LP+ +V
Sbjct: 549 RLAGYLCL*EKWQADWTKGEFELALHRPIGDVWVRALPQPEV 674
Score = 171 bits (367), Expect(2) = 7e-051
Identities = 78/156 (50%), Positives = 97/156 (62%)
Frame = +2 / -2
Query: 17 VLFL*VVHDSIHARWDDVKPN*VRHLSNLHAIPLKVILDAPVGRVARWSLRRSLLICNVV 196
VL VVH IH RWDDV+P +R SN AI LK I + P+G +A L + L +
Sbjct: 675 VLLAEVVHAPIHPRWDDVEPVRIRLWSNRLAISLKGIGNLPIG*IAGRRLLQQFLALHEA 496
Query: 197 CSILIDPEIV**ALD*LGLFRCETW*PVFHNVLHYLWILPIY*WIKKPTNMEVPGPLRCF 376
+LIDP IV A D R E P+FH VLHYLW++P+Y + KP NMEVPG L C
Sbjct: 495 SCVLIDPNIVRGAHDHFSFSRSELGQPLFHKVLHYLWVMPVYQRVDKPANMEVPGSLSCC 316
Query: 377 LIFS*VCKRFIPVEVKNYPDLAFLSCLVFIAVSCNC 484
L+FS*V K +PVE++NY +L LSCL+ VSCNC
Sbjct: 315 LVFS*VGKSLVPVEIQNYTNLPLLSCLILGPVSCNC 208
Score = 169 bits (363), Expect = 2e-041
Identities = 102/223 (45%), Positives = 123/223 (55%)
Frame = -1 / +2
Query: 684 TMLXXVSRXXXXESXTGXXXMSQG**HXLVMIKGXXPLXGAHNALXVXTHRQNLTLLFIT 505
TML V R TG M+QG* LV G L GA NAL V T +QNLTLL
Sbjct: 8 TMLTFVLRPLAIV*STGLHSMNQG*LRFLVTT*GRILLKGAANALPVGTQQQNLTLLLTI 187
Query: 504 FSYLMLLQLQDTAINTRQLRKARSG*FLTSTGMNLLQTQLKIKKQRKGPGTSILVGFLIH 325
FS ++QLQDT + RQLR+ R *F STG LL TQLK K+Q K PGTS+L G
Sbjct: 188 FS*HTVMQLQDTGPSIRQLRRGRLV*FWISTGTRLLPTQLKTKQQLKEPGTSMLAGLSTR 367
Query: 324 **MGNIQR*CKTL*KTGYQVSHLNRPS*SRAHQTISGSINILHTTLQINKLLRRDHRATR 145
** G R*CKTL*K G S L + S A +TI GSI+ + + R A +
Sbjct: 368 **TGITHR*CKTL*KRGCPSSLLLKLKWSWAPRTILGSISTQLAS*RARNCCSRRRPAIQ 547
Query: 144 PTGASNITFKGMACKLDRWRTQFGFTSSHRACMES*TT*RKST 16
P G + + MA +LD+ R + G TSSHR CM + TT +ST
Sbjct: 548 PIGRLPMPLREMASRLDQRRIRTGSTSSHRGCMGACTTSARST 676
Score = 126 bits (269), Expect(2) = 3e-035
Identities = 70/139 (50%), Positives = 82/139 (58%)
Frame = +1 / -1
Query: 208 D*SRNSLMSP*LAWPVQV*NLVAGLSQCLALSLDIAHLLMDQETNQYGSPWPFALLFDLQ 387
D*S+ S SP* Q * LSQ LALS+ A L ++T+Q+GSPW F LL LQ
Sbjct: 484 D*SQYSPRSP*PF*LQQE*TWATSLSQGLALSVGNARLSAGRQTSQHGSPWLFELLLGLQ 305
Query: 388 LSL*KVHTS*SQELSRPCLSELPGIYCGILQLQ*HEIGECYEQQCKVLSMSSHXQCIVCT 567
LS *+ TS*+ EL +P SELP + GILQL + E EQQCKVL +SSH QCI CT
Sbjct: 304 LSW*EPRTS*NPELYQPSPSELPDTWSGILQLHNRVLRENCEQQCKVLLLSSHRQCICCT 125
Query: 568 XXGGXALYHNQXMLLSLAH 624
L NQ LSL H
Sbjct: 124 FEEDSTLRRNQEAQLSLVH 68
Score = 49.6 bits (102), Expect(2) = 7e-051
Identities = 23/53 (43%), Positives = 29/53 (54%)
Frame = +2 / -2
Query: 527 FCR*VXTXSALCAPXRGXKPFIITXXCYYPWLX*XXPVLDSXXXXLETXXSIV 685
FC *V T SA AP R +P+++T YPW PVL + L+T SIV
Sbjct: 165 FCC*VPTGSAFAAPLRRIRPYVVTKKRNYPWFIECKPVLYTIAKGLKTKVSIV 7
Score = 42.3 bits (86), Expect(2) = 3e-035
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = +1 / -1
Query: 31 GSSRLHTCPMGRCKAKLSAPSVQFARH 111
GS+R HT PMGRC+A ++P VQ A H
Sbjct: 661 GSARTHTSPMGRCRASSNSPLVQSACH 581
>gb|BJ463364.1|BJ463364 BJ463364 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags27d04 5', mRNA sequence
Length = 649
Score = 359 bits (779), Expect = 7e-099
Identities = 144/212 (67%), Positives = 162/212 (76%)
Frame = -3 / +3
Query: 667 FKTXXXRVKXWXXLXEPRIVAXXGYDKGLXPPXXCTQCTAXXNSSTEPYIVVHNILLSHA 488
FKT RVK W EPRIVA GYD G PP C++CTA NS+TEPYIV HN LL+H
Sbjct: 12 FKTFGDRVKHWFTFNEPRIVALLGYDVGSNPPQRCSKCTAGGNSATEPYIVAHNFLLAHG 191
Query: 487 TAVARYRNKYQATQKGKVGIVLDFNWYEPFTNSTEDQKAAQRARDFHIGWFLDPLINGQY 308
AVARYR KYQA QKGKVGIVLDFNWYE TNSTEDQ AAQRARDFH+GWF+DPLING Y
Sbjct: 192 YAVARYRTKYQAAQKGKVGIVLDFNWYEALTNSTEDQAAAQRARDFHVGWFVDPLINGHY 371
Query: 307 PKIMQDIVKDRLPSFTPEQAKLVKGSSDYFGINQYTTYYIADQQTPPQGPPSYSSDWGVQ 128
P+IMQD+VK+RLP FTP +AK+V GS+DY GINQYT + Q+ Q P SYS+DW V
Sbjct: 372 PQIMQDLVKERLPKFTPAEAKMVMGSADYIGINQYTASLMKGQKLLQQTPTSYSADWQVT 551
Query: 127 YYFQRNGVQIGQMAHSIWLYIVPSGMYGVVNY 32
Y F+RNG IG A+S WLYIVPSGMYG V+Y
Sbjct: 552 YAFERNGKPIGPKANSNWLYIVPSGMYGCVHY 647
Score = 253 bits (548), Expect = 5e-067
Identities = 135/216 (62%), Positives = 145/216 (67%)
Frame = +3 / -1
Query: 30 R*FTTPYMPDGTM*SQIECAICPICTPFL*K*YWTPQSDE*LGGPCGGVC*SAM*YVVY* 209
R* T PY+PDGTM*SQ E A PI PFL K T QS E*L G C M VY*
Sbjct: 649 R*CTHPYIPDGTM*SQFEFAFGPIGLPFLSKA*VTCQSAE*LVGVCCSNFWPFMRLAVY* 470
Query: 210 LIPK*SDEPLTSLACSGVKLGSRSFTMSCIIFGYCPFINGSRNQPIWKSLALCAAF*SSV 389
LIP *S EP+T LA +GV LG+ SFT SCII G CPFI+GS NQP WKSLAL AA SSV
Sbjct: 469 LIPI*SAEPMTILASAGVNLGNLSFTRSCIICG*CPFISGSTNQPTWKSLAL*AAAWSSV 290
Query: 390 EFVKGSYQLKSRTIPTLPF*VAWYLLRYLATAVA*DRRML*TTM*GSVDEFXXAVHCVHX 569
E V+ SYQLKSRTIPT PF* A YL+RYLATA +R L* TM*GSV EF AVH +H
Sbjct: 289 ELVRASYQLKSRTIPTFPF*AA*YLVRYLATA*PCAKRKL*ATM*GSVAEFPPAVHLLHL 110
Query: 570 XGGXSPLS*PXNATILGSXNXXQXLTRXXXVLKXXS 677
GG P S*P +ATILGS N Q TR VLK S
Sbjct: 109 *GGFDPTS*PRSATILGSLNVNQCFTRSPKVLKQKS 2
Score = 189 bits (407), Expect = 1e-047
Identities = 96/213 (45%), Positives = 119/213 (55%)
Frame = -2 / +2
Query: 668 FQDXXXSSQXLXXIX*AKDSSIXWL**RAXPPXXVHTMHCXXELIDRTLHCCS*HSPISC 489
F D S + L I * KDS WL R V MHC EL +RTLHCCS S +
Sbjct: 11 F*DLWRSCKALVYIQ*TKDSCASWLRRRVESSSKVQQMHCRWELSNRTLHCCSQFSLSTR 190
Query: 488 YCSCKIPQ*IPGNSERQGRDSS*LQLV*TFYKLN*RSKSSAKGQGLPYWLVS*SINKWAI 309
CSCKIP + G+SE +G SS QLV Y+LN*R SS+K QGLP WLV +K A+
Sbjct: 191 LCSCKIPDQVSGSSEGEGWYSSGFQLVRGSYQLN*RPSSSSKSQGLPCWLVCRPADKRAL 370
Query: 308 SKDNARHCERPATKFHT*TGQASQGLIRLFRDQSIYYILHCRSTNSSAGTTELLVRLGRP 129
DNAR CER + H+ GL L+ DQS++ H ++A +L RL
Sbjct: 371 PTDNARPCEREVAQVHSC*S*NGHGLRGLYWDQSVHS*PHEGPEIAAADADQLFSRLAGY 550
Query: 128 ILLSKEWRANWTDGALNLALHRPIGHVWSRELP 30
+ L ++W+A+WT G LALHRPIG VW R LP
Sbjct: 551 LCL*EKWQADWTKGEFELALHRPIGDVWVRALP 649
Score = 169 bits (364), Expect(2) = 4e-049
Identities = 76/151 (50%), Positives = 95/151 (62%)
Frame = +2 / -3
Query: 32 VVHDSIHARWDDVKPN*VRHLSNLHAIPLKVILDAPVGRVARWSLRRSLLICNVVCSILI 211
VVH IH RWDDV+P +R SN AI LK I + P+G +A L + L + +LI
Sbjct: 647 VVHAPIHPRWDDVEPVRIRLWSNRLAISLKGIGNLPIG*IAGRRLLQQFLALHEASCVLI 468
Query: 212 DPEIV**ALD*LGLFRCETW*PVFHNVLHYLWILPIY*WIKKPTNMEVPGPLRCFLIFS* 391
DP IV A D R E P+FH VLHYLW++P+Y + KP NMEVPG L C L+FS*
Sbjct: 467 DPNIVRGAHDHFSFSRSELGQPLFHKVLHYLWVMPVYQRVDKPANMEVPGSLSCCLVFS* 288
Query: 392 VCKRFIPVEVKNYPDLAFLSCLVFIAVSCNC 484
V K +PVE++NY +L LSCL+ VSCNC
Sbjct: 287 VGKSLVPVEIQNYTNLPLLSCLILGPVSCNC 195
Score = 161 bits (347), Expect = 3e-039
Identities = 95/203 (46%), Positives = 115/203 (56%)
Frame = -1 / +1
Query: 639 TGXXXMSQG**HXLVMIKGXXPLXGAHNALXVXTHRQNLTLLFITFSYLMLLQLQDTAIN 460
TG M+QG* LV G L GA NAL V T +QNLTLL FS ++QLQDT +
Sbjct: 40 TGLHSMNQG*LRFLVTT*GRILLKGAANALPVGTQQQNLTLLLTIFS*HTVMQLQDTGPS 219
Query: 459 TRQLRKARSG*FLTSTGMNLLQTQLKIKKQRKGPGTSILVGFLIH**MGNIQR*CKTL*K 280
RQLR+ R *F STG LL TQLK K+Q K PGTS+L G ** G R*CKTL*K
Sbjct: 220 IRQLRRGRLV*FWISTGTRLLPTQLKTKQQLKEPGTSMLAGLSTR**TGITHR*CKTL*K 399
Query: 279 TGYQVSHLNRPS*SRAHQTISGSINILHTTLQINKLLRRDHRATRPTGASNITFKGMACK 100
G S L + S A +TI GSI+ + + R A +P G + + MA +
Sbjct: 400 RGCPSSLLLKLKWSWAPRTILGSISTQLAS*RARNCCSRRRPAIQPIGRLPMPLREMASR 579
Query: 99 LDRWRTQFGFTSSHRACMES*TT 31
LD+ R + G TSSHR CM + TT
Sbjct: 580 LDQRRIRTGSTSSHRGCMGACTT 648
Score = 126 bits (269), Expect(2) = 3e-035
Identities = 70/139 (50%), Positives = 82/139 (58%)
Frame = +1 / -2
Query: 208 D*SRNSLMSP*LAWPVQV*NLVAGLSQCLALSLDIAHLLMDQETNQYGSPWPFALLFDLQ 387
D*S+ S SP* Q * LSQ LALS+ A L ++T+Q+GSPW F LL LQ
Sbjct: 471 D*SQYSPRSP*PF*LQQE*TWATSLSQGLALSVGNARLSAGRQTSQHGSPWLFELLLGLQ 292
Query: 388 LSL*KVHTS*SQELSRPCLSELPGIYCGILQLQ*HEIGECYEQQCKVLSMSSHXQCIVCT 567
LS *+ TS*+ EL +P SELP + GILQL + E EQQCKVL +SSH QCI CT
Sbjct: 291 LSW*EPRTS*NPELYQPSPSELPDTWSGILQLHNRVLRENCEQQCKVLLLSSHRQCICCT 112
Query: 568 XXGGXALYHNQXMLLSLAH 624
L NQ LSL H
Sbjct: 111 FEEDSTLRRNQEAQLSLVH 55
Score = 45.1 bits (92), Expect(2) = 4e-049
Identities = 20/48 (41%), Positives = 26/48 (54%)
Frame = +2 / -3
Query: 527 FCR*VXTXSALCAPXRGXKPFIITXXCYYPWLX*XXPVLDSXXXXLET 670
FC *V T SA AP R +P+++T YPW PVL + L+T
Sbjct: 152 FCC*VPTGSAFAAPLRRIRPYVVTKKRNYPWFIECKPVLYTIAKGLKT 9
Score = 42.3 bits (86), Expect(2) = 3e-035
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = +1 / -2
Query: 31 GSSRLHTCPMGRCKAKLSAPSVQFARH 111
GS+R HT PMGRC+A ++P VQ A H
Sbjct: 648 GSARTHTSPMGRCRASSNSPLVQSACH 568
>gb|BE231065.1|BE231065 HVSMEg0016D19f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0016D19f, mRNA sequence
Length = 887
Score = 345 bits (747), Expect = 2e-094
Identities = 139/178 (78%), Positives = 153/178 (85%)
Frame = -3 / +2
Query: 550 AXXNSSTEPYIVVHNILLSHATAVARYRNKYQATQKGKVGIVLDFNWYEPFTNSTEDQKA 371
A NS+TEPY VVHNILL HATAVARYRNKYQA+QKGKVGIVLDFNWY+ T+S D+ A
Sbjct: 5 AGGNSATEPYTVVHNILLCHATAVARYRNKYQASQKGKVGIVLDFNWYDAATDSPADKAA 184
Query: 370 AQRARDFHIGWFLDPLINGQYPKIMQDIVKDRLPSFTPEQAKLVKGSSDYFGINQYTTYY 191
AQRARDFH+GWFLDPL+NGQYPK MQDIVK+RLPSFTPEQ+KLVKGS DY GINQYT Y
Sbjct: 185 AQRARDFHVGWFLDPLLNGQYPKTMQDIVKERLPSFTPEQSKLVKGSVDYIGINQYTATY 364
Query: 190 IADQQTPPQGPPSYSSDWGVQYYFQRNGVQIGQMAHSIWLYIVPSGMYGVVNYLKEKY 17
+ADQ T Q P SYSSDW VQY FQRNGV IGQ A+S WLYIVP+GMYG VNY++EKY
Sbjct: 365 MADQPTLQQPPTSYSSDWHVQYIFQRNGVPIGQKANSNWLYIVPTGMYGCVNYIREKY 538
Score = 262 bits (566), Expect = 2e-069
Identities = 125/175 (71%), Positives = 137/175 (78%)
Frame = +3 / -3
Query: 18 YFSFR*FTTPYMPDGTM*SQIECAICPICTPFL*K*YWTPQSDE*LGGPCGGVC*SAM*Y 197
YFS *FT PYMP GTM*SQ+E A CPI TPF * Y T QSDE*L G C V SAM*
Sbjct: 537 YFSLM*FTHPYMPVGTM*SQLEFAFCPIGTPFR*NIY*TCQSDE*LVGGCWSVGWSAM*V 358
Query: 198 VVY*LIPK*SDEPLTSLACSGVKLGSRSFTMSCIIFGYCPFINGSRNQPIWKSLALCAAF 377
VY* IP *S EPLT+L CSGVKLG+ SFT+SC++FGY PF +GSRNQP WKSLAL AA
Sbjct: 357 AVY*FIPM*STEPLTNLDCSGVKLGNLSFTISCMVFGY*PFSSGSRNQPTWKSLALWAAA 178
Query: 378 *SSVEFVKGSYQLKSRTIPTLPF*VAWYLLRYLATAVA*DRRML*TTM*GSVDEF 542
S+ E V SYQLKS+TIPTLPF*+AWYLLRYLATAVA* +RML TT+*GSV EF
Sbjct: 177 LSAGESVAASYQLKSKTIPTLPF*LAWYLLRYLATAVA*HKRMLWTTV*GSVAEF 13
Score = 234 bits (506), Expect = 3e-061
Identities = 104/178 (58%), Positives = 124/178 (69%)
Frame = -2 / +1
Query: 551 CXXELIDRTLHCCS*HSPISCYCSCKIPQ*IPGNSERQGRDSS*LQLV*TFYKLN*RSKS 372
C EL +R LHCC *HS +SCYCSC+IPQ*+PG SERQ DS LQLV* Y+L R S
Sbjct: 4 CRWELSNRALHCCP*HSLMSCYCSCEIPQ*VPGKSERQSWDSFGLQLV*CCYRLTCRQSS 183
Query: 371 SAKGQGLPYWLVS*SINKWAISKDNARHCERPATKFHT*TGQASQGLIRLFRDQSIYYIL 192
S KGQGLP WLVS*S KW+I +D+AR+ +R T FHT*T QGL RL D+S+Y L
Sbjct: 184 SPKGQGLPCWLVS*STTKWSIPEDHARYSKREVT*FHT*TI*VGQGLCRLHWDKSVYSDL 363
Query: 191 HCRSTNSSAGTTELLVRLGRPILLSKEWRANWTDGALNLALHRPIGHVWSRELPKGKV 18
H R TN+ A T +LL+ L I +S +WR +WT+G L LALHRP HVW EL KG+V
Sbjct: 364 HGRPTNAPATTNKLLI*LACSIYISAKWRTDWTEGELQLALHRPNRHVWMCELHKGEV 537
Score = 210 bits (453), Expect = 7e-054
Identities = 108/179 (60%), Positives = 125/179 (69%)
Frame = -1 / +3
Query: 552 LXVXTHRQNLTLLFITFSYLMLLQLQDTAINTRQLRKARSG*FLTSTGMNLLQTQLKIKK 373
L V T +Q+LTLL ITFSY+MLLQL+DTAI+TRQ+RKA+ G*F TSTGM LL T L K+
Sbjct: 3 LPVGTQQQSLTLLSITFSYVMLLQLRDTAISTRQVRKAKLG*FWTSTGMMLLPTHLPTKQ 182
Query: 372 QRKGPGTSILVGFLIH**MGNIQR*CKTL*KTGYQVSHLNRPS*SRAHQTISGSINILHT 193
Q KGPGTS+LVGFLIH *M N +R CK *K GY VSHLN S SRA G I+I
Sbjct: 183 QPKGPGTSMLVGFLIHY*MVNTRRPCKI**KRGYLVSHLNNLSWSRAL*ITLG*ISIQRP 362
Query: 192 TLQINKLLRRDHRATRPTGASNITFKGMACKLDRWRTQFGFTSSHRACMES*TT*RKST 16
T Q N+ +AT TG NI F MA +LDR RT GFTSS +ACM+ *TT* +ST
Sbjct: 363 TWQTNQRSSNHQQATHLTGMFNIYFSEMAYRLDRRRTPIGFTSSQQACMDV*TT*GRST 539
Score = 209 bits (450), Expect = 2e-053
Identities = 102/178 (57%), Positives = 119/178 (66%)
Frame = +1 / -1
Query: 19 TFPLGSSRLHTCPMGRCKAKLSAPSVQFARHSFESNIGRPSRTSSSVVPAEEFVDLQCSM 198
T PL SS +HTC +GRCKA S+PSVQ RH E I S+ SS +V A V L C
Sbjct: 536 TSPLCSSHIHTCLLGRCKANWSSPSVQSVRHFAEIYIEHASQMSSLLVVAGALVGLPCRS 357
Query: 199 *YID*SRNSLMSP*LAWPVQV*NLVAGLSQCLALSLDIAHLLMDQETNQYGSPWPFALLF 378
Y D S+ +L SP* VQV*N V L LA S I HL++DQETNQ+GSPWPF LL
Sbjct: 356 LYTDLSQCNLQSP*PT*IVQV*N*VTSLLLYLAWSSGIDHLVVDQETNQHGSPWPFGLLL 177
Query: 379 DLQLSL*KVHTS*SQELSRPCLSELPGIYCGILQLQ*HEIGECYEQQCKVLSMSSHXQ 552
Q+S *+ HTS*S +LS+ CLS+LPG YCGI QLQ*H+I ECY QQCK L +SSH Q
Sbjct: 176 CRQVSR*QHHTS*SPKLSQLCLSDLPGTYCGISQLQ*HDIRECYGQQCKALLLSSHRQ 3
Score = 198 bits (427), Expect = 3e-050
Identities = 100/179 (55%), Positives = 114/179 (63%)
Frame = +2 / -2
Query: 17 VLFL*VVHDSIHARWDDVKPN*VRHLSNLHAIPLKVILDAPVGRVARWSLRRSLLICNVV 196
VL VVH SIHA WDDVKP VR LSN +AI LK IL+ PV VA W L L+C+V
Sbjct: 538 VLLPYVVHTSIHACWDDVKPIGVRLLSNRYAISLKYILNMPVR*VACWWLLERWLVCHVG 359
Query: 197 CSILIDPEIV**ALD*LGLFRCETW*PVFHNVLHYLWILPIY*WIKKPTNMEVPGPLRCF 376
ILI P ++ ALD L LFRCET *P+F+ +LH L +L I *WIKKPTNMEVPGPL C
Sbjct: 358 RCILIYPNVIYRALDQLRLFRCETR*PLFYYILHGLRVLTI**WIKKPTNMEVPGPLGCC 179
Query: 377 LIFS*VCKRFIPVEVKNYPDLAFLSCLVFIAVSCNCXXXXXXXXXXXXXXFCR*VXTXS 553
+ *V IPVEV+NYP+ AFL+CLV IAVS NC C *V T S
Sbjct: 178 FVGR*VGSSIIPVEVQNYPNFAFLTCLVLIAVSRNCSSMT*ENVMDNSVRLCC*VPTGS 2
>gb|BJ465257.1|BJ465257 BJ465257 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags39b11 5', mRNA sequence
Length = 661
Score = 332 bits (720), Expect = 1e-090
Identities = 134/205 (65%), Positives = 152/205 (74%)
Frame = -3 / +2
Query: 694 IXXDYAXXXFKTXXXRVKXWXXLXEPRIVAXXGYDKGLXPPXXCTQCTAXXNSSTEPYIV 515
+ DYA FKT RVK W EPRIVA GYD G PP C++CTA NS+TEPYIV
Sbjct: 47 LFADYADFCFKTFGDRVKHWFTFNEPRIVALLGYDVGSNPPQRCSKCTAGGNSATEPYIV 226
Query: 514 VHNILLSHATAVARYRNKYQATQKGKVGIVLDFNWYEPFTNSTEDQKAAQRARDFHIGWF 335
HN LL+H AVARYR KYQA QKGKVGIVLDFNWYE TNSTEDQ AAQRARDFH+GWF
Sbjct: 227 AHNFLLAHGYAVARYRTKYQAAQKGKVGIVLDFNWYEALTNSTEDQAAAQRARDFHVGWF 406
Query: 334 LDPLINGQYPKIMQDIVKDRLPSFTPEQAKLVKGSSDYFGINQYTTYYIADQQTPPQGPP 155
+DPLING YP+IMQD+VK+RLP FTP +AK+V GS+DY GINQYT + Q+ Q P
Sbjct: 407 VDPLINGHYPQIMQDLVKERLPKFTPAEAKMVMGSADYIGINQYTASLMKGQKLLQQTPT 586
Query: 154 SYSSDWGVQYYFQRNGVQIGQMAHS 80
SYS+DW V Y F+RNG IG A+S
Sbjct: 587 SYSADWQVTYAFERNGKPIGPKANS 661
Score = 230 bits (496), Expect = 8e-060
Identities = 125/202 (61%), Positives = 134/202 (66%)
Frame = +3 / -2
Query: 81 ECAICPICTPFL*K*YWTPQSDE*LGGPCGGVC*SAM*YVVY*LIPK*SDEPLTSLACSG 260
E A PI PFL K T QS E*L G C M VY*LIP *S EP+T LA +G
Sbjct: 660 EFAFGPIGLPFLSKA*VTCQSAE*LVGVCCSNFWPFMRLAVY*LIPI*SAEPMTILASAG 481
Query: 261 VKLGSRSFTMSCIIFGYCPFINGSRNQPIWKSLALCAAF*SSVEFVKGSYQLKSRTIPTL 440
V LG+ SFT SCII G CPFI+GS NQP WKSLAL AA SSVE V+ SYQLKSRTIPT
Sbjct: 480 VNLGNLSFTRSCIICG*CPFISGSTNQPTWKSLAL*AAAWSSVELVRASYQLKSRTIPTF 301
Query: 441 PF*VAWYLLRYLATAVA*DRRML*TTM*GSVDEFXXAVHCVHXXGGXSPLS*PXNATILG 620
PF* A YL+RYLATA +R L* TM*GSV EF AVH +H GG P S*P +ATILG
Sbjct: 300 PF*AA*YLVRYLATA*PCAKRKL*ATM*GSVAEFPPAVHLLHL*GGFDPTS*PRSATILG 121
Query: 621 SXNXXQXLTRXXXVLKXXSA*S 686
S N Q TR VLK SA*S
Sbjct: 120 SLNVNQCFTRSPKVLKQKSA*S 55
Score = 163 bits (351), Expect = 8e-040
Identities = 86/199 (43%), Positives = 109/199 (54%)
Frame = -2 / +1
Query: 683 LC*XXFQDXXXSSQXLXXIX*AKDSSIXWL**RAXPPXXVHTMHCXXELIDRTLHCCS*H 504
LC* F D S + L I * KDS WL R V MHC EL +RTLHCCS
Sbjct: 58 LC*LLF*DLWRSCKALVYIQ*TKDSCASWLRRRVESSSKVQQMHCRWELSNRTLHCCSQF 237
Query: 503 SPISCYCSCKIPQ*IPGNSERQGRDSS*LQLV*TFYKLN*RSKSSAKGQGLPYWLVS*SI 324
S + CSCKIP + G+SE +G SS QLV Y+LN*R SS+K QGLP WLV
Sbjct: 238 SLSTRLCSCKIPDQVSGSSEGEGWYSSGFQLVRGSYQLN*RPSSSSKSQGLPCWLVCRPA 417
Query: 323 NKWAISKDNARHCERPATKFHT*TGQASQGLIRLFRDQSIYYILHCRSTNSSAGTTELLV 144
+K A+ DNAR CER + H+ GL L+ DQS++ H ++A +L
Sbjct: 418 DKRALPTDNARPCEREVAQVHSC*S*NGHGLRGLYWDQSVHS*PHEGPEIAAADADQLFS 597
Query: 143 RLGRPILLSKEWRANWTDG 87
RL + L ++W+A+WT G
Sbjct: 598 RLAGYLCL*EKWQADWTKG 654
Score = 144 bits (310), Expect = 4e-034
Identities = 90/200 (45%), Positives = 108/200 (54%)
Frame = -1 / +3
Query: 684 TMLXXVSRXXXXESXTGXXXMSQG**HXLVMIKGXXPLXGAHNALXVXTHRQNLTLLFIT 505
TML V R TG M+QG* LV G L GA NAL V T +QNLTLL
Sbjct: 57 TMLTFVLRPLAIV*STGLHSMNQG*LRFLVTT*GRILLKGAANALPVGTQQQNLTLLLTI 236
Query: 504 FSYLMLLQLQDTAINTRQLRKARSG*FLTSTGMNLLQTQLKIKKQRKGPGTSILVGFLIH 325
FS ++QLQDT + RQLR+ R *F STG LL TQLK K+Q K PGTS+L G
Sbjct: 237 FS*HTVMQLQDTGPSIRQLRRGRLV*FWISTGTRLLPTQLKTKQQLKEPGTSMLAGLSTR 416
Query: 324 **MGNIQR*CKTL*KTGYQVSHLNRPS*SRAHQTISGSINILHTTLQINKLLRRDHRATR 145
** G R*CKTL*K G S L + S A +TI GSI+ + + R A +
Sbjct: 417 **TGITHR*CKTL*KRGCPSSLLLKLKWSWAPRTILGSISTQLAS*RARNCCSRRRPAIQ 596
Query: 144 PTGASNITFKGMACKLDRWR 85
P G + + MA +LD+ R
Sbjct: 597 PIGRLPMPLREMASRLDQRR 656
Score = 143 bits (307), Expect(2) = 1e-042
Identities = 65/134 (48%), Positives = 83/134 (61%)
Frame = +2 / -1
Query: 83 VRHLSNLHAIPLKVILDAPVGRVARWSLRRSLLICNVVCSILIDPEIV**ALD*LGLFRC 262
+R SN AI LK I + P+G +A L + L + +LIDP IV A D R
Sbjct: 658 IRLWSNRLAISLKGIGNLPIG*IAGRRLLQQFLALHEASCVLIDPNIVRGAHDHFSFSRS 479
Query: 263 ETW*PVFHNVLHYLWILPIY*WIKKPTNMEVPGPLRCFLIFS*VCKRFIPVEVKNYPDLA 442
E P+FH VLHYLW++P+Y + KP NMEVPG L C L+FS*V K +PVE++NY +L
Sbjct: 478 ELGQPLFHKVLHYLWVMPVYQRVDKPANMEVPGSLSCCLVFS*VGKSLVPVEIQNYTNLP 299
Query: 443 FLSCLVFIAVSCNC 484
LSCL+ VSCNC
Sbjct: 298 LLSCLILGPVSCNC 257
Score = 126 bits (269), Expect = 2e-028
Identities = 70/139 (50%), Positives = 82/139 (58%)
Frame = +1 / -3
Query: 208 D*SRNSLMSP*LAWPVQV*NLVAGLSQCLALSLDIAHLLMDQETNQYGSPWPFALLFDLQ 387
D*S+ S SP* Q * LSQ LALS+ A L ++T+Q+GSPW F LL LQ
Sbjct: 533 D*SQYSPRSP*PF*LQQE*TWATSLSQGLALSVGNARLSAGRQTSQHGSPWLFELLLGLQ 354
Query: 388 LSL*KVHTS*SQELSRPCLSELPGIYCGILQLQ*HEIGECYEQQCKVLSMSSHXQCIVCT 567
LS *+ TS*+ EL +P SELP + GILQL + E EQQCKVL +SSH QCI CT
Sbjct: 353 LSW*EPRTS*NPELYQPSPSELPDTWSGILQLHNRVLRENCEQQCKVLLLSSHRQCICCT 174
Query: 568 XXGGXALYHNQXMLLSLAH 624
L NQ LSL H
Sbjct: 173 FEEDSTLRRNQEAQLSLVH 117
Score = 49.6 bits (102), Expect(2) = 1e-042
Identities = 23/53 (43%), Positives = 29/53 (54%)
Frame = +2 / -1
Query: 527 FCR*VXTXSALCAPXRGXKPFIITXXCYYPWLX*XXPVLDSXXXXLETXXSIV 685
FC *V T SA AP R +P+++T YPW PVL + L+T SIV
Sbjct: 214 FCC*VPTGSAFAAPLRRIRPYVVTKKRNYPWFIECKPVLYTIAKGLKTKVSIV 56
>gb|BU994352.1|BU994352 HM06L21r HM Hordeum vulgare subsp. vulgare cDNA clone HM06L21
5-PRIME, mRNA sequence
Length = 644
Score = 330 bits (715), Expect = 5e-090
Identities = 132/190 (69%), Positives = 149/190 (78%)
Frame = -3 / +1
Query: 610 VAXXGYDKGLXPPXXCTQCTAXXNSSTEPYIVVHNILLSHATAVARYRNKYQATQKGKVG 431
VA GYD G PP C++CTA NS+TEPYIV HN LL+H AVARYR KYQA QKGKVG
Sbjct: 10 VALLGYDVGSNPPQRCSKCTAGGNSATEPYIVAHNFLLAHGYAVARYRTKYQAAQKGKVG 189
Query: 430 IVLDFNWYEPFTNSTEDQKAAQRARDFHIGWFLDPLINGQYPKIMQDIVKDRLPSFTPEQ 251
IVLDFNWYE TNSTEDQ AAQRARDFH+GWF+DPLING YP+IMQD+VK+RLP FTP +
Sbjct: 190 IVLDFNWYEALTNSTEDQAAAQRARDFHVGWFVDPLINGHYPQIMQDLVKERLPKFTPAE 369
Query: 250 AKLVKGSSDYFGINQYTTYYIADQQTPPQGPPSYSSDWGVQYYFQRNGVQIGQMAHSIWL 71
AK+VKGS+DY GINQYT + Q+ Q P SYS+DW V Y F+RNG IG A+S WL
Sbjct: 370 AKMVKGSADYIGINQYTASLMKGQKLLQQTPTSYSADWQVTYAFERNGKPIGPKANSNWL 549
Query: 70 YIVPSGMYGV 41
YIVPSGMY V
Sbjct: 550 YIVPSGMYXV 579
Score = 227 bits (491), Expect = 4e-059
Identities = 120/192 (62%), Positives = 131/192 (68%)
Frame = +3 / -1
Query: 42 TPYMPDGTM*SQIECAICPICTPFL*K*YWTPQSDE*LGGPCGGVC*SAM*YVVY*LIPK 221
T Y+PDGTM*SQ E A PI PFL K T QS E*L G C M VY LIP
Sbjct: 578 TXYIPDGTM*SQFEFAFGPIGLPFLSKA*VTCQSAE*LVGVCCSNFWPFMRLAVYWLIPI 399
Query: 222 *SDEPLTSLACSGVKLGSRSFTMSCIIFGYCPFINGSRNQPIWKSLALCAAF*SSVEFVK 401
*S EPLT LA +GV LG+ SFT SCII G CPFI+GS NQP WKSLAL AA SSVE V+
Sbjct: 398 *SAEPLTILASAGVNLGNLSFTRSCIICG*CPFISGSTNQPTWKSLAL*AAAWSSVELVR 219
Query: 402 GSYQLKSRTIPTLPF*VAWYLLRYLATAVA*DRRML*TTM*GSVDEFXXAVHCVHXXGGX 581
SYQLKSRTIPT PF* A YL+RYLATA +R L* TM*GSV EF AVH +H GG
Sbjct: 218 ASYQLKSRTIPTFPF*AA*YLVRYLATA*PCAKRKL*ATM*GSVAEFPPAVHLLHL*GGF 39
Query: 582 SPLS*PXNATIL 617
P S*P +AT++
Sbjct: 38 DPTS*PRSATLV 3
Score = 167 bits (359), Expect = 6e-041
Identities = 83/184 (45%), Positives = 106/184 (57%)
Frame = -2 / +3
Query: 599 WL**RAXPPXXVHTMHCXXELIDRTLHCCS*HSPISCYCSCKIPQ*IPGNSERQGRDSS* 420
WL R V MHC EL +RTLHCCS S + CSCKIP + G+SER+G +SS
Sbjct: 21 WLRCRVESSSKVQQMHCRWELSNRTLHCCSQFSLSTRLCSCKIPDQVSGSSEREGWNSSG 200
Query: 419 LQLV*TFYKLN*RSKSSAKGQGLPYWLVS*SINKWAISKDNARHCERPATKFHT*TGQAS 240
LQLV Y+LN* SS+K QGLP WLV +K A+ DNAR CER + H+
Sbjct: 201 LQLVRGSYQLN*GPSSSSKSQGLPCWLVCRPADKRALPTDNARPCEREVAQVHSC*S*NG 380
Query: 239 QGLIRLFRDQSIYYILHCRSTNSSAGTTELLVRLGRPILLSKEWRANWTDGALNLALHRP 60
QGL L+ DQ ++ H ++A +L RL + L ++W+A+W G LALHRP
Sbjct: 381 QGLRGLYWDQPVHS*PHEGPEIAAADADQLFSRLAGYLCL*EKWQADWAKGEFELALHRP 560
Query: 59 IGHV 48
IG V
Sbjct: 561 IGDV 572
Score = 166 bits (358), Expect(2) = 3e-044
Identities = 74/146 (50%), Positives = 93/146 (63%)
Frame = +2 / -3
Query: 47 IHARWDDVKPN*VRHLSNLHAIPLKVILDAPVGRVARWSLRRSLLICNVVCSILIDPEIV 226
IH RWDDV+P +R N AI LK I + P+G +A L + L + +L+DP IV
Sbjct: 573 IHPRWDDVEPVRIRLWPNRLAISLKGIGNLPIG*IAGRRLLQQFLALHEASCVLVDPNIV 394
Query: 227 **ALD*LGLFRCETW*PVFHNVLHYLWILPIY*WIKKPTNMEVPGPLRCFLIFS*VCKRF 406
ALD R E P+FH VLHYLW++P+Y + KPTNMEVPG L C L+ S*V K
Sbjct: 393 RGALDHFSFSRSELGQPLFHKVLHYLWVMPVYQRVDKPTNMEVPGSLSCCLVLS*VGKSL 214
Query: 407 IPVEVKNYPDLAFLSCLVFIAVSCNC 484
+PVEV+NY +L FLSCL+ VSCNC
Sbjct: 213 VPVEVQNYSNLPFLSCLILGPVSCNC 136
Score = 153 bits (329), Expect = 9e-037
Identities = 88/185 (47%), Positives = 107/185 (57%)
Frame = -1 / +2
Query: 600 LVMIKGXXPLXGAHNALXVXTHRQNLTLLFITFSYLMLLQLQDTAINTRQLRKARSG*FL 421
LV + G L GA NAL V T +QNLTLL FS ++QLQDT + RQLRK R *F
Sbjct: 20 LVTM*GRILLKGAANALPVGTQQQNLTLLLTIFS*HTVMQLQDTGPSIRQLRKGRLE*FW 199
Query: 420 TSTGMNLLQTQLKIKKQRKGPGTSILVGFLIH**MGNIQR*CKTL*KTGYQVSHLNRPS* 241
TSTG LL TQL+ K+Q K PGTS+LVG ** G R*CKTL*K G S L +
Sbjct: 200 TSTGTRLLPTQLRTKQQLKEPGTSMLVGLSTR**TGITHR*CKTL*KRGCPSSLLLKLKW 379
Query: 240 SRAHQTISGSINILHTTLQINKLLRRDHRATRPTGASNITFKGMACKLDRWRTQFGFTSS 61
SRA +TI GS + + + R A +P G + + MA +L + R + G TSS
Sbjct: 380 SRAPRTILGSTSTQLAS*RARNCCSRRRPAIQPIGRLPMPLREMASRLGQRRIRTGSTSS 559
Query: 60 HRACM 46
HR CM
Sbjct: 560 HRGCM 574
Score = 121 bits (259), Expect(2) = 3e-031
Identities = 67/130 (51%), Positives = 78/130 (60%)
Frame = +1 / -2
Query: 211 *SRNSLMSP*LAWPVQV*NLVAGLSQCLALSLDIAHLLMDQETNQYGSPWPFALLFDLQL 390
*S+ S SP* Q * LSQ LALS+ A L ++TNQ+GSPW F LL QL
Sbjct: 409 *SQYSPRSP*PF*LQQE*TWATSLSQGLALSVGNARLSAGRQTNQHGSPWLFELLLGPQL 230
Query: 391 SL*KVHTS*SQELSRPCLSELPGIYCGILQLQ*HEIGECYEQQCKVLSMSSHXQCIVCTX 570
S *+ TS*S EL +P LSELP + GILQL + E EQQCKVL +SSH QCI CT
Sbjct: 229 SW*EPRTS*SPELFQPSLSELPDTWSGILQLHNRVLRENCEQQCKVLLLSSHRQCICCTF 50
Query: 571 XGGXALYHNQ 600
L+ NQ
Sbjct: 49 EEDSTLHRNQ 20
Score = 33.6 bits (67), Expect(2) = 3e-031
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +1 / -2
Query: 46 HTCPMGRCKAKLSAPSVQFARH 111
HT PMGRC+A ++P Q A H
Sbjct: 574 HTSPMGRCRASSNSPLAQSACH 509
Score = 31.8 bits (63), Expect(2) = 3e-044
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +2 / -3
Query: 527 FCR*VXTXSALCAPXRGXKPFIIT 598
FC *V T SA AP R +P+I+T
Sbjct: 93 FCC*VPTGSAFAAPLRRIRPYIVT 22
>gb|BF261097.2|BF261097 HVSMEf0023M01f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0023M01f, mRNA sequence
Length = 751
Score = 320 bits (694), Expect = 4e-087
Identities = 127/182 (69%), Positives = 146/182 (80%)
Frame = -3 / +2
Query: 562 TQCTAXXNSSTEPYIVVHNILLSHATAVARYRNKYQATQKGKVGIVLDFNWYEPFTNSTE 383
++CTA NS+TEPYIV HN LL+H AVARYR KYQA QKGKVGIVLDFNWYE TNSTE
Sbjct: 2 SKCTAGGNSATEPYIVAHNFLLAHGYAVARYRTKYQAAQKGKVGIVLDFNWYEALTNSTE 181
Query: 382 DQKAAQRARDFHIGWFLDPLINGQYPKIMQDIVKDRLPSFTPEQAKLVKGSSDYFGINQY 203
DQ AAQRARDFH+GWF+DPLING YP+IMQD+VK+RLP FTP +AK+V GS+DY GINQY
Sbjct: 182 DQAAAQRARDFHVGWFVDPLINGHYPQIMQDLVKERLPKFTPAEAKMVMGSADYIGINQY 361
Query: 202 TTYYIADQQTPPQGPPSYSSDWGVQYYFQRNGVQIGQMAHSIWLYIVPSGMYGVVNYLKE 23
T + Q+ Q P SYS+DW V Y F+RNG IG A+S WLYIVPSGMYG V+YL +
Sbjct: 362 TASLMKGQKLLQQTPTSYSADWQVTYAFERNGKPIGPKANSNWLYIVPSGMYGCVHYLSQ 541
Query: 22 KY 17
KY
Sbjct: 542 KY 547
Score = 218 bits (471), Expect = 2e-056
Identities = 116/180 (64%), Positives = 124/180 (68%)
Frame = +3 / -2
Query: 18 YFSFR*FTTPYMPDGTM*SQIECAICPICTPFL*K*YWTPQSDE*LGGPCGGVC*SAM*Y 197
YF R* T PY+PDGTM*SQ E A PI PFL K T QS E*L G C M
Sbjct: 546 YFWLR*CTHPYIPDGTM*SQFEFAFGPIGLPFLSKA*VTCQSAE*LVGVCCSNFWPFMRL 367
Query: 198 VVY*LIPK*SDEPLTSLACSGVKLGSRSFTMSCIIFGYCPFINGSRNQPIWKSLALCAAF 377
VY*LIP *S EP+T LA +GV LG+ SFT SCII G CPFI+GS NQP WKSLAL AA
Sbjct: 366 AVY*LIPI*SAEPMTILASAGVNLGNLSFTRSCIICG*CPFISGSTNQPTWKSLAL*AAA 187
Query: 378 *SSVEFVKGSYQLKSRTIPTLPF*VAWYLLRYLATAVA*DRRML*TTM*GSVDEFXXAVH 557
SSVE V+ SYQLKSRTIPT PF* A YL+RYLATA +R L* TM*GSV EF AVH
Sbjct: 186 WSSVELVRASYQLKSRTIPTFPF*AA*YLVRYLATA*PCAKRKL*ATM*GSVAEFPPAVH 7
Score = 173 bits (373), Expect = 7e-043
Identities = 84/180 (46%), Positives = 108/180 (60%)
Frame = -2 / +1
Query: 557 MHCXXELIDRTLHCCS*HSPISCYCSCKIPQ*IPGNSERQGRDSS*LQLV*TFYKLN*RS 378
MHC EL +RTLHCCS S + CSCKIP + G+SE +G SS QLV Y+LN*R
Sbjct: 7 MHCRWELSNRTLHCCSQFSLSTRLCSCKIPDQVSGSSEGEGWYSSGFQLVRGSYQLN*RP 186
Query: 377 KSSAKGQGLPYWLVS*SINKWAISKDNARHCERPATKFHT*TGQASQGLIRLFRDQSIYY 198
SS+K QGLP WLV +K A+ DNAR CER + H+ GL L+ DQS++
Sbjct: 187 SSSSKSQGLPCWLVCRPADKRALPTDNARPCEREVAQVHSC*S*NGHGLRGLYWDQSVHS 366
Query: 197 ILHCRSTNSSAGTTELLVRLGRPILLSKEWRANWTDGALNLALHRPIGHVWSRELPKGKV 18
H ++A +L RL + L ++W+A+WT G LALHRPIG VW R LP+ +V
Sbjct: 367 *PHEGPEIAAADADQLFSRLAGYLCL*EKWQADWTKGEFELALHRPIGDVWVRALPQPEV 546
Score = 171 bits (367), Expect = 5e-042
Identities = 78/156 (50%), Positives = 97/156 (62%)
Frame = +2 / -1
Query: 17 VLFL*VVHDSIHARWDDVKPN*VRHLSNLHAIPLKVILDAPVGRVARWSLRRSLLICNVV 196
VL VVH IH RWDDV+P +R SN AI LK I + P+G +A L + L +
Sbjct: 547 VLLAEVVHAPIHPRWDDVEPVRIRLWSNRLAISLKGIGNLPIG*IAGRRLLQQFLALHEA 368
Query: 197 CSILIDPEIV**ALD*LGLFRCETW*PVFHNVLHYLWILPIY*WIKKPTNMEVPGPLRCF 376
+LIDP IV A D R E P+FH VLHYLW++P+Y + KP NMEVPG L C
Sbjct: 367 SCVLIDPNIVRGAHDHFSFSRSELGQPLFHKVLHYLWVMPVYQRVDKPANMEVPGSLSCC 188
Query: 377 LIFS*VCKRFIPVEVKNYPDLAFLSCLVFIAVSCNC 484
L+FS*V K +PVE++NY +L LSCL+ VSCNC
Sbjct: 187 LVFS*VGKSLVPVEIQNYTNLPLLSCLILGPVSCNC 80
Score = 148 bits (317), Expect = 4e-035
Identities = 85/181 (46%), Positives = 105/181 (58%)
Frame = -1 / +3
Query: 558 NALXVXTHRQNLTLLFITFSYLMLLQLQDTAINTRQLRKARSG*FLTSTGMNLLQTQLKI 379
NAL V T +QNLTLL FS ++QLQDT + RQLR+ R *F STG LL TQLK
Sbjct: 6 NALPVGTQQQNLTLLLTIFS*HTVMQLQDTGPSIRQLRRGRLV*FWISTGTRLLPTQLKT 185
Query: 378 KKQRKGPGTSILVGFLIH**MGNIQR*CKTL*KTGYQVSHLNRPS*SRAHQTISGSINIL 199
K+Q K PGTS+L G ** G R*CKTL*K G S L + S A +TI GSI+
Sbjct: 186 KQQLKEPGTSMLAGLSTR**TGITHR*CKTL*KRGCPSSLLLKLKWSWAPRTILGSISTQ 365
Query: 198 HTTLQINKLLRRDHRATRPTGASNITFKGMACKLDRWRTQFGFTSSHRACMES*TT*RKS 19
+ + R A +P G + + MA +LD+ R + G TSSHR CM + TT +S
Sbjct: 366 LAS*RARNCCSRRRPAIQPIGRLPMPLREMASRLDQRRIRTGSTSSHRGCMGACTTSARS 545
Query: 18 T 16
T
Sbjct: 546 T 548
Score = 109 bits (232), Expect(2) = 3e-030
Identities = 61/117 (52%), Positives = 73/117 (62%)
Frame = +1 / -3
Query: 208 D*SRNSLMSP*LAWPVQV*NLVAGLSQCLALSLDIAHLLMDQETNQYGSPWPFALLFDLQ 387
D*S+ S SP* Q * LSQ LALS+ A L ++T+Q+GSPW F LL LQ
Sbjct: 356 D*SQYSPRSP*PF*LQQE*TWATSLSQGLALSVGNARLSAGRQTSQHGSPWLFELLLGLQ 177
Query: 388 LSL*KVHTS*SQELSRPCLSELPGIYCGILQLQ*HEIGECYEQQCKVLSMSSHXQCI 558
LS *+ TS*+ EL +P SELP + GILQL + E EQQCKVL +SSH QCI
Sbjct: 176 LSW*EPRTS*NPELYQPSPSELPDTWSGILQLHNRVLRENCEQQCKVLLLSSHRQCI 6
Score = 42.3 bits (86), Expect(2) = 3e-030
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = +1 / -3
Query: 31 GSSRLHTCPMGRCKAKLSAPSVQFARH 111
GS+R HT PMGRC+A ++P VQ A H
Sbjct: 533 GSARTHTSPMGRCRASSNSPLVQSACH 453
>gb|AV917011.1|AV917011 AV917011 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags20h04 5', mRNA sequence
Length = 597
Score = 320 bits (693), Expect = 5e-087
Identities = 128/190 (67%), Positives = 144/190 (75%)
Frame = -3 / +2
Query: 667 FKTXXXRVKXWXXLXEPRIVAXXGYDKGLXPPXXCTQCTAXXNSSTEPYIVVHNILLSHA 488
FKT RVK W EPRIVA GYD G PP C++CTA NS+TEPYIV HN LL+H
Sbjct: 26 FKTFGDRVKHWFTFNEPRIVALLGYDVGSNPPQRCSKCTAGGNSATEPYIVAHNFLLAHG 205
Query: 487 TAVARYRNKYQATQKGKVGIVLDFNWYEPFTNSTEDQKAAQRARDFHIGWFLDPLINGQY 308
AVARYR KYQA QKGKVGIVLDFNWYE TNSTEDQ AAQRARDFH+GWF+DPLING Y
Sbjct: 206 YAVARYRTKYQAAQKGKVGIVLDFNWYEALTNSTEDQAAAQRARDFHVGWFVDPLINGHY 385
Query: 307 PKIMQDIVKDRLPSFTPEQAKLVKGSSDYFGINQYTTYYIADQQTPPQGPPSYSSDWGVQ 128
P+IMQD+VK+RLP FTP +AK+V GS+DY GINQYT + Q+ Q P SYS+DW V
Sbjct: 386 PQIMQDLVKERLPKFTPAEAKMVMGSADYIGINQYTASLMKGQKLLQQTPTSYSADWQVT 565
Query: 127 YYFQRNGVQI 98
Y F+RNG I
Sbjct: 566 YAFERNGKPI 595
Score = 221 bits (476), Expect = 5e-057
Identities = 118/190 (62%), Positives = 127/190 (66%)
Frame = +3 / -1
Query: 96 PICTPFL*K*YWTPQSDE*LGGPCGGVC*SAM*YVVY*LIPK*SDEPLTSLACSGVKLGS 275
PI PFL K T QS E*L G C M VY*LIP *S EP+T LA +GV LG+
Sbjct: 597 PIGLPFLSKA*VTCQSAE*LVGVCCSNFWPFMRLAVY*LIPI*SAEPMTILASAGVNLGN 418
Query: 276 RSFTMSCIIFGYCPFINGSRNQPIWKSLALCAAF*SSVEFVKGSYQLKSRTIPTLPF*VA 455
SFT SCII G CPFI+GS NQP WKSLAL AA SSVE V+ SYQLKSRTIPT PF* A
Sbjct: 417 LSFTRSCIICG*CPFISGSTNQPTWKSLAL*AAAWSSVELVRASYQLKSRTIPTFPF*AA 238
Query: 456 WYLLRYLATAVA*DRRML*TTM*GSVDEFXXAVHCVHXXGGXSPLS*PXNATILGSXNXX 635
YL+RYLATA +R L* TM*GSV EF AVH +H GG P S*P +ATILGS N
Sbjct: 237 *YLVRYLATA*PCAKRKL*ATM*GSVAEFPPAVHLLHL*GGFDPTS*PRSATILGSLNVN 58
Query: 636 QXLTRXXXVL 665
Q TR VL
Sbjct: 57 QCFTRSPKVL 28
Score = 152 bits (327), Expect = 2e-036
Identities = 80/189 (42%), Positives = 103/189 (54%)
Frame = -2 / +1
Query: 662 DXXXSSQXLXXIX*AKDSSIXWL**RAXPPXXVHTMHCXXELIDRTLHCCS*HSPISCYC 483
D S + L I * KDS WL R V MHC EL +RTLHCCS S + C
Sbjct: 31 DLWRSCKALVYIQ*TKDSCASWLRRRVESSSKVQQMHCRWELSNRTLHCCSQFSLSTRLC 210
Query: 482 SCKIPQ*IPGNSERQGRDSS*LQLV*TFYKLN*RSKSSAKGQGLPYWLVS*SINKWAISK 303
SCKIP + G+SE +G SS QLV Y+LN*R SS+K QGLP WLV +K A+
Sbjct: 211 SCKIPDQVSGSSEGEGWYSSGFQLVRGSYQLN*RPSSSSKSQGLPCWLVCRPADKRALPT 390
Query: 302 DNARHCERPATKFHT*TGQASQGLIRLFRDQSIYYILHCRSTNSSAGTTELLVRLGRPIL 123
DNAR CER + H+ GL L+ DQS++ H ++A +L RL +
Sbjct: 391 DNARPCEREVAQVHSC*S*NGHGLRGLYWDQSVHS*PHEGPEIAAADADQLFSRLAGYLC 570
Query: 122 LSKEWRANW 96
L ++W+A+W
Sbjct: 571 L*EKWQADW 597
Score = 140 bits (300), Expect(2) = 1e-039
Identities = 63/129 (48%), Positives = 80/129 (62%)
Frame = +2 / -3
Query: 98 NLHAIPLKVILDAPVGRVARWSLRRSLLICNVVCSILIDPEIV**ALD*LGLFRCETW*P 277
N AI LK I + P+G +A L + L + +LIDP IV A D R E P
Sbjct: 595 NRLAISLKGIGNLPIG*IAGRRLLQQFLALHEASCVLIDPNIVRGAHDHFSFSRSELGQP 416
Query: 278 VFHNVLHYLWILPIY*WIKKPTNMEVPGPLRCFLIFS*VCKRFIPVEVKNYPDLAFLSCL 457
+FH VLHYLW++P+Y + KP NMEVPG L C L+FS*V K +PVE++NY +L LSCL
Sbjct: 415 LFHKVLHYLWVMPVYQRVDKPANMEVPGSLSCCLVFS*VGKSLVPVEIQNYTNLPLLSCL 236
Query: 458 VFIAVSCNC 484
+ VSCNC
Sbjct: 235 ILGPVSCNC 209
Score = 136 bits (291), Expect = 1e-031
Identities = 83/181 (45%), Positives = 100/181 (55%)
Frame = -1 / +3
Query: 639 TGXXXMSQG**HXLVMIKGXXPLXGAHNALXVXTHRQNLTLLFITFSYLMLLQLQDTAIN 460
TG M+QG* LV G L GA NAL V T +QNLTLL FS ++QLQDT +
Sbjct: 54 TGLHSMNQG*LRFLVTT*GRILLKGAANALPVGTQQQNLTLLLTIFS*HTVMQLQDTGPS 233
Query: 459 TRQLRKARSG*FLTSTGMNLLQTQLKIKKQRKGPGTSILVGFLIH**MGNIQR*CKTL*K 280
RQLR+ R *F STG LL TQLK K+Q K PGTS+L G ** G R*CKTL*K
Sbjct: 234 IRQLRRGRLV*FWISTGTRLLPTQLKTKQQLKEPGTSMLAGLSTR**TGITHR*CKTL*K 413
Query: 279 TGYQVSHLNRPS*SRAHQTISGSINILHTTLQINKLLRRDHRATRPTGASNITFKGMACK 100
G S L + S A +TI GSI+ + + R A +P G + + MA +
Sbjct: 414 RGCPSSLLLKLKWSWAPRTILGSISTQLAS*RARNCCSRRRPAIQPIGRLPMPLREMASR 593
Query: 99 L 97
L
Sbjct: 594 L 596
Score = 126 bits (269), Expect = 2e-028
Identities = 70/139 (50%), Positives = 82/139 (58%)
Frame = +1 / -2
Query: 208 D*SRNSLMSP*LAWPVQV*NLVAGLSQCLALSLDIAHLLMDQETNQYGSPWPFALLFDLQ 387
D*S+ S SP* Q * LSQ LALS+ A L ++T+Q+GSPW F LL LQ
Sbjct: 485 D*SQYSPRSP*PF*LQQE*TWATSLSQGLALSVGNARLSAGRQTSQHGSPWLFELLLGLQ 306
Query: 388 LSL*KVHTS*SQELSRPCLSELPGIYCGILQLQ*HEIGECYEQQCKVLSMSSHXQCIVCT 567
LS *+ TS*+ EL +P SELP + GILQL + E EQQCKVL +SSH QCI CT
Sbjct: 305 LSW*EPRTS*NPELYQPSPSELPDTWSGILQLHNRVLRENCEQQCKVLLLSSHRQCICCT 126
Query: 568 XXGGXALYHNQXMLLSLAH 624
L NQ LSL H
Sbjct: 125 FEEDSTLRRNQEAQLSLVH 69
Score = 42.8 bits (87), Expect(2) = 1e-039
Identities = 18/39 (46%), Positives = 22/39 (56%)
Frame = +2 / -3
Query: 527 FCR*VXTXSALCAPXRGXKPFIITXXCYYPWLX*XXPVL 643
FC *V T SA AP R +P+++T YPW PVL
Sbjct: 166 FCC*VPTGSAFAAPLRRIRPYVVTKKRNYPWFIECKPVL 50
>gb|AV915505.1|AV915505 AV915505 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags14n06 5', mRNA sequence
Length = 641
Score = 303 bits (656), Expect = 7e-082
Identities = 120/171 (70%), Positives = 137/171 (80%)
Frame = -3 / +2
Query: 565 CTQCTAXXNSSTEPYIVVHNILLSHATAVARYRNKYQATQKGKVGIVLDFNWYEPFTNST 386
C++CTA NS+TEPYIV HN LL+H AVARYR KYQA QKGKVGIVLDFNWYE TNST
Sbjct: 11 CSKCTAGGNSATEPYIVAHNFLLAHGYAVARYRTKYQAAQKGKVGIVLDFNWYEALTNST 190
Query: 385 EDQKAAQRARDFHIGWFLDPLINGQYPKIMQDIVKDRLPSFTPEQAKLVKGSSDYFGINQ 206
EDQ AAQRARDFH+GWF+DPLING YP+IMQD+VK+RLP FTP +AK+V GS+DY GINQ
Sbjct: 191 EDQAAAQRARDFHVGWFVDPLINGHYPQIMQDLVKERLPKFTPAEAKMVMGSADYIGINQ 370
Query: 205 YTTYYIADQQTPPQGPPSYSSDWGVQYYFQRNGVQIGQMAHSIWLYIVPSG 53
YT + Q+ Q P SYS+DW V Y F+RNG IG A+S WLYIVPSG
Sbjct: 371 YTASLMKGQKLLQQTPTSYSADWQVTYAFERNGKPIGPKANSNWLYIVPSG 523
Score = 207 bits (447), Expect = 5e-053
Identities = 110/171 (64%), Positives = 118/171 (69%)
Frame = +3 / -3
Query: 54 PDGTM*SQIECAICPICTPFL*K*YWTPQSDE*LGGPCGGVC*SAM*YVVY*LIPK*SDE 233
PDGTM*SQ E A PI PFL K T QS E*L G C M VY*LIP *S E
Sbjct: 522 PDGTM*SQFEFAFGPIGLPFLSKA*VTCQSAE*LVGVCCSNFWPFMRLAVY*LIPI*SAE 343
Query: 234 PLTSLACSGVKLGSRSFTMSCIIFGYCPFINGSRNQPIWKSLALCAAF*SSVEFVKGSYQ 413
P+T LA +GV LG+ SFT SCII G CPFI+GS NQP WKSLAL AA SSVE V+ SYQ
Sbjct: 342 PMTILASAGVNLGNLSFTRSCIICG*CPFISGSTNQPTWKSLAL*AAAWSSVELVRASYQ 163
Query: 414 LKSRTIPTLPF*VAWYLLRYLATAVA*DRRML*TTM*GSVDEFXXAVHCVH 566
LKSRTIPT PF* A YL+RYLATA +R L* TM*GSV EF AVH +H
Sbjct: 162 LKSRTIPTFPF*AA*YLVRYLATA*PCAKRKL*ATM*GSVAEFPPAVHLLH 10
Score = 160 bits (345), Expect = 5e-039
Identities = 79/171 (46%), Positives = 101/171 (59%)
Frame = -2 / +1
Query: 566 VHTMHCXXELIDRTLHCCS*HSPISCYCSCKIPQ*IPGNSERQGRDSS*LQLV*TFYKLN 387
V MHC EL +RTLHCCS S + CSCKIP + G+SE +G SS QLV Y+LN
Sbjct: 10 VQQMHCRWELSNRTLHCCSQFSLSTRLCSCKIPDQVSGSSEGEGWYSSGFQLVRGSYQLN 189
Query: 386 *RSKSSAKGQGLPYWLVS*SINKWAISKDNARHCERPATKFHT*TGQASQGLIRLFRDQS 207
*R SS+K QGLP WLV +K A+ DNAR CER + H+ GL L+ DQS
Sbjct: 190 *RPSSSSKSQGLPCWLVCRPADKRALPTDNARPCEREVAQVHSC*S*NGHGLRGLYWDQS 369
Query: 206 IYYILHCRSTNSSAGTTELLVRLGRPILLSKEWRANWTDGALNLALHRPIG 54
++ H ++A +L RL + L ++W+A+WT G LALHRPIG
Sbjct: 370 VHS*PHEGPEIAAADADQLFSRLAGYLCL*EKWQADWTKGEFELALHRPIG 522
Score = 158 bits (340), Expect = 3e-038
Identities = 71/143 (49%), Positives = 90/143 (62%)
Frame = +2 / -2
Query: 56 RWDDVKPN*VRHLSNLHAIPLKVILDAPVGRVARWSLRRSLLICNVVCSILIDPEIV**A 235
RWDDV+P +R SN AI LK I + P+G +A L + L + +LIDP IV A
Sbjct: 520 RWDDVEPVRIRLWSNRLAISLKGIGNLPIG*IAGRRLLQQFLALHEASCVLIDPNIVRGA 341
Query: 236 LD*LGLFRCETW*PVFHNVLHYLWILPIY*WIKKPTNMEVPGPLRCFLIFS*VCKRFIPV 415
D R E P+FH VLHYLW++P+Y + KP NMEVPG L C L+FS*V K +PV
Sbjct: 340 HDHFSFSRSELGQPLFHKVLHYLWVMPVYQRVDKPANMEVPGSLSCCLVFS*VGKSLVPV 161
Query: 416 EVKNYPDLAFLSCLVFIAVSCNC 484
E++NY +L LSCL+ VSCNC
Sbjct: 160 EIQNYTNLPLLSCLILGPVSCNC 92
Score = 141 bits (303), Expect = 3e-033
Identities = 82/173 (47%), Positives = 100/173 (57%)
Frame = -1 / +3
Query: 573 LXGAHNALXVXTHRQNLTLLFITFSYLMLLQLQDTAINTRQLRKARSG*FLTSTGMNLLQ 394
L GA NAL V T +QNLTLL FS ++QLQDT + RQLR+ R *F STG LL
Sbjct: 3 LKGAANALPVGTQQQNLTLLLTIFS*HTVMQLQDTGPSIRQLRRGRLV*FWISTGTRLLP 182
Query: 393 TQLKIKKQRKGPGTSILVGFLIH**MGNIQR*CKTL*KTGYQVSHLNRPS*SRAHQTISG 214
TQLK K+Q K PGTS+L G ** G R*CKTL*K G S L + S A +TI G
Sbjct: 183 TQLKTKQQLKEPGTSMLAGLSTR**TGITHR*CKTL*KRGCPSSLLLKLKWSWAPRTILG 362
Query: 213 SINILHTTLQINKLLRRDHRATRPTGASNITFKGMACKLDRWRTQFGFTSSHR 55
SI+ + + R A +P G + + MA +LD+ R + G TSSHR
Sbjct: 363 SISTQLAS*RARNCCSRRRPAIQPIGRLPMPLREMASRLDQRRIRTGSTSSHR 521
Score = 115 bits (245), Expect(2) = 3e-028
Identities = 63/120 (52%), Positives = 75/120 (62%)
Frame = +1 / -1
Query: 208 D*SRNSLMSP*LAWPVQV*NLVAGLSQCLALSLDIAHLLMDQETNQYGSPWPFALLFDLQ 387
D*S+ S SP* Q * LSQ LALS+ A L ++T+Q+GSPW F LL LQ
Sbjct: 368 D*SQYSPRSP*PF*LQQE*TWATSLSQGLALSVGNARLSAGRQTSQHGSPWLFELLLGLQ 189
Query: 388 LSL*KVHTS*SQELSRPCLSELPGIYCGILQLQ*HEIGECYEQQCKVLSMSSHXQCIVCT 567
LS *+ TS*+ EL +P SELP + GILQL + E EQQCKVL +SSH QCI CT
Sbjct: 188 LSW*EPRTS*NPELYQPSPSELPDTWSGILQLHNRVLRENCEQQCKVLLLSSHRQCICCT 9
Score = 29.9 bits (59), Expect(2) = 3e-028
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +1 / -1
Query: 55 PMGRCKAKLSAPSVQFARH 111
PMGRC+A ++P VQ A H
Sbjct: 521 PMGRCRASSNSPLVQSACH 465
>gb|AV912838.1|AV912838 AV912838 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags10i17 5', mRNA sequence
Length = 603
Score = 303 bits (655), Expect = 9e-082
Identities = 120/170 (70%), Positives = 136/170 (80%)
Frame = -3 / +2
Query: 526 PYIVVHNILLSHATAVARYRNKYQATQKGKVGIVLDFNWYEPFTNSTEDQKAAQRARDFH 347
PYIV HN LL+H AVARYR KYQA QKGKVGIVLDFNWYE TNSTEDQ AAQRARDFH
Sbjct: 11 PYIVAHNFLLAHGYAVARYRTKYQAAQKGKVGIVLDFNWYEALTNSTEDQAAAQRARDFH 190
Query: 346 IGWFLDPLINGQYPKIMQDIVKDRLPSFTPEQAKLVKGSSDYFGINQYTTYYIADQQTPP 167
+GWF+DPLING YP+IMQD+VK+RLP FTP +AK+V GS+DY GINQYT + Q+
Sbjct: 191 VGWFVDPLINGHYPQIMQDLVKERLPKFTPAEAKMVMGSADYIGINQYTASLMKGQKLLQ 370
Query: 166 QGPPSYSSDWGVQYYFQRNGVQIGQMAHSIWLYIVPSGMYGVVNYLKEKY 17
Q P SYS+DW V Y F+RNG IG A+S WLYIVPSGMYG V+YL +KY
Sbjct: 371 QTPTSYSADWQVTYAFERNGKPIGPKANSNWLYIVPSGMYGCVHYLSQKY 520
Score = 205 bits (442), Expect = 2e-052
Identities = 109/170 (64%), Positives = 117/170 (68%)
Frame = +3 / -1
Query: 18 YFSFR*FTTPYMPDGTM*SQIECAICPICTPFL*K*YWTPQSDE*LGGPCGGVC*SAM*Y 197
YF R* T PY+PDGTM*SQ E A PI PFL K T QS E*L G C M
Sbjct: 519 YFWLR*CTHPYIPDGTM*SQFEFAFGPIGLPFLSKA*VTCQSAE*LVGVCCSNFWPFMRL 340
Query: 198 VVY*LIPK*SDEPLTSLACSGVKLGSRSFTMSCIIFGYCPFINGSRNQPIWKSLALCAAF 377
VY*LIP *S EP+T LA +GV LG+ SFT SCII G CPFI+GS NQP WKSLAL AA
Sbjct: 339 AVY*LIPI*SAEPMTILASAGVNLGNLSFTRSCIICG*CPFISGSTNQPTWKSLAL*AAA 160
Query: 378 *SSVEFVKGSYQLKSRTIPTLPF*VAWYLLRYLATAVA*DRRML*TTM*G 527
SSVE V+ SYQLKSRTIPT PF* A YL+RYLATA +R L* TM*G
Sbjct: 159 WSSVELVRASYQLKSRTIPTFPF*AA*YLVRYLATA*PCAKRKL*ATM*G 10
Score = 171 bits (367), Expect = 5e-042
Identities = 78/156 (50%), Positives = 97/156 (62%)
Frame = +2 / -3
Query: 17 VLFL*VVHDSIHARWDDVKPN*VRHLSNLHAIPLKVILDAPVGRVARWSLRRSLLICNVV 196
VL VVH IH RWDDV+P +R SN AI LK I + P+G +A L + L +
Sbjct: 520 VLLAEVVHAPIHPRWDDVEPVRIRLWSNRLAISLKGIGNLPIG*IAGRRLLQQFLALHEA 341
Query: 197 CSILIDPEIV**ALD*LGLFRCETW*PVFHNVLHYLWILPIY*WIKKPTNMEVPGPLRCF 376
+LIDP IV A D R E P+FH VLHYLW++P+Y + KP NMEVPG L C
Sbjct: 340 SCVLIDPNIVRGAHDHFSFSRSELGQPLFHKVLHYLWVMPVYQRVDKPANMEVPGSLSCC 161
Query: 377 LIFS*VCKRFIPVEVKNYPDLAFLSCLVFIAVSCNC 484
L+FS*V K +PVE++NY +L LSCL+ VSCNC
Sbjct: 160 LVFS*VGKSLVPVEIQNYTNLPLLSCLILGPVSCNC 53
Score = 159 bits (341), Expect = 2e-038
Identities = 78/170 (45%), Positives = 101/170 (59%)
Frame = -2 / +1
Query: 527 TLHCCS*HSPISCYCSCKIPQ*IPGNSERQGRDSS*LQLV*TFYKLN*RSKSSAKGQGLP 348
TLHCCS S + CSCKIP + G+SE +G SS QLV Y+LN*R SS+K QGLP
Sbjct: 10 TLHCCSQFSLSTRLCSCKIPDQVSGSSEGEGWYSSGFQLVRGSYQLN*RPSSSSKSQGLP 189
Query: 347 YWLVS*SINKWAISKDNARHCERPATKFHT*TGQASQGLIRLFRDQSIYYILHCRSTNSS 168
WLV +K A+ DNAR CER + H+ GL L+ DQS++ H ++
Sbjct: 190 CWLVCRPADKRALPTDNARPCEREVAQVHSC*S*NGHGLRGLYWDQSVHS*PHEGPEIAA 369
Query: 167 AGTTELLVRLGRPILLSKEWRANWTDGALNLALHRPIGHVWSRELPKGKV 18
A +L RL + L ++W+A+WT G LALHRPIG VW R LP+ +V
Sbjct: 370 ADADQLFSRLAGYLCL*EKWQADWTKGEFELALHRPIGDVWVRALPQPEV 519
Score = 136 bits (291), Expect = 1e-031
Identities = 79/171 (46%), Positives = 98/171 (57%)
Frame = -1 / +3
Query: 528 NLTLLFITFSYLMLLQLQDTAINTRQLRKARSG*FLTSTGMNLLQTQLKIKKQRKGPGTS 349
NLTLL FS ++QLQDT + RQLR+ R *F STG LL TQLK K+Q K PGTS
Sbjct: 9 NLTLLLTIFS*HTVMQLQDTGPSIRQLRRGRLV*FWISTGTRLLPTQLKTKQQLKEPGTS 188
Query: 348 ILVGFLIH**MGNIQR*CKTL*KTGYQVSHLNRPS*SRAHQTISGSINILHTTLQINKLL 169
+L G ** G R*CKTL*K G S L + S A +TI GSI+ + +
Sbjct: 189 MLAGLSTR**TGITHR*CKTL*KRGCPSSLLLKLKWSWAPRTILGSISTQLAS*RARNCC 368
Query: 168 RRDHRATRPTGASNITFKGMACKLDRWRTQFGFTSSHRACMES*TT*RKST 16
R A +P G + + MA +LD+ R + G TSSHR CM + TT +ST
Sbjct: 369 SRRRPAIQPIGRLPMPLREMASRLDQRRIRTGSTSSHRGCMGACTTSARST 521
Score = 92.3 bits (195), Expect(2) = 4e-025
Identities = 54/107 (50%), Positives = 65/107 (60%)
Frame = +1 / -2
Query: 208 D*SRNSLMSP*LAWPVQV*NLVAGLSQCLALSLDIAHLLMDQETNQYGSPWPFALLFDLQ 387
D*S+ S SP* Q * LSQ LALS+ A L ++T+Q+GSPW F LL LQ
Sbjct: 329 D*SQYSPRSP*PF*LQQE*TWATSLSQGLALSVGNARLSAGRQTSQHGSPWLFELLLGLQ 150
Query: 388 LSL*KVHTS*SQELSRPCLSELPGIYCGILQLQ*HEIGECYEQQCKV 528
LS *+ TS*+ EL +P SELP + GILQL + E EQQCKV
Sbjct: 149 LSW*EPRTS*NPELYQPSPSELPDTWSGILQLHNRVLRENCEQQCKV 9
Score = 42.3 bits (86), Expect(2) = 4e-025
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = +1 / -2
Query: 31 GSSRLHTCPMGRCKAKLSAPSVQFARH 111
GS+R HT PMGRC+A ++P VQ A H
Sbjct: 506 GSARTHTSPMGRCRASSNSPLVQSACH 426
>gb|AV913558.1|AV913558 AV913558 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags22i02 5', mRNA sequence
Length = 517
Score = 296 bits (641), Expect = 8e-080
Identities = 118/172 (68%), Positives = 134/172 (77%)
Frame = -3 / +1
Query: 613 IVAXXGYDKGLXPPXXCTQCTAXXNSSTEPYIVVHNILLSHATAVARYRNKYQATQKGKV 434
IVA GYD G PP C++CTA NS+TEPYIV HN LL+H AVARYR KYQA QKGKV
Sbjct: 1 IVALLGYDVGSNPPQRCSKCTAGGNSATEPYIVAHNFLLAHGYAVARYRTKYQAAQKGKV 180
Query: 433 GIVLDFNWYEPFTNSTEDQKAAQRARDFHIGWFLDPLINGQYPKIMQDIVKDRLPSFTPE 254
GIVLDFNWYE TNSTEDQ AAQRARDFH+GWF+DPLING YP+IMQD+VK+RLP FTP
Sbjct: 181 GIVLDFNWYEALTNSTEDQAAAQRARDFHVGWFVDPLINGHYPQIMQDLVKERLPKFTPA 360
Query: 253 QAKLVKGSSDYFGINQYTTYYIADQQTPPQGPPSYSSDWGVQYYFQRNGVQI 98
+AK+V GS+DY GINQYT + Q+ Q P SYS+DW V Y F+RNG I
Sbjct: 361 EAKMVMGSADYIGINQYTASLMKGQKLLQQTPTSYSADWQVTYAFERNGKPI 516
Score = 199 bits (430), Expect = 1e-050
Identities = 106/168 (63%), Positives = 115/168 (68%)
Frame = +3 / -3
Query: 108 PFL*K*YWTPQSDE*LGGPCGGVC*SAM*YVVY*LIPK*SDEPLTSLACSGVKLGSRSFT 287
PFL K T QS E*L G C M VY*LIP *S EP+T LA +GV LG+ SFT
Sbjct: 506 PFLSKA*VTCQSAE*LVGVCCSNFWPFMRLAVY*LIPI*SAEPMTILASAGVNLGNLSFT 327
Query: 288 MSCIIFGYCPFINGSRNQPIWKSLALCAAF*SSVEFVKGSYQLKSRTIPTLPF*VAWYLL 467
SCII G CPFI+GS NQP WKSLAL AA SSVE V+ SYQLKSRTIPT PF* A YL+
Sbjct: 326 RSCIICG*CPFISGSTNQPTWKSLAL*AAAWSSVELVRASYQLKSRTIPTFPF*AA*YLV 147
Query: 468 RYLATAVA*DRRML*TTM*GSVDEFXXAVHCVHXXGGXSPLS*PXNAT 611
RYLATA +R L* TM*GSV EF AVH +H GG P S*P +AT
Sbjct: 146 RYLATA*PCAKRKL*ATM*GSVAEFPPAVHLLHL*GGFDPTS*PRSAT 3
Score = 140 bits (300), Expect = 9e-033
Identities = 63/129 (48%), Positives = 80/129 (62%)
Frame = +2 / -2
Query: 98 NLHAIPLKVILDAPVGRVARWSLRRSLLICNVVCSILIDPEIV**ALD*LGLFRCETW*P 277
N AI LK I + P+G +A L + L + +LIDP IV A D R E P
Sbjct: 516 NRLAISLKGIGNLPIG*IAGRRLLQQFLALHEASCVLIDPNIVRGAHDHFSFSRSELGQP 337
Query: 278 VFHNVLHYLWILPIY*WIKKPTNMEVPGPLRCFLIFS*VCKRFIPVEVKNYPDLAFLSCL 457
+FH VLHYLW++P+Y + KP NMEVPG L C L+FS*V K +PVE++NY +L LSCL
Sbjct: 336 LFHKVLHYLWVMPVYQRVDKPANMEVPGSLSCCLVFS*VGKSLVPVEIQNYTNLPLLSCL 157
Query: 458 VFIAVSCNC 484
+ VSCNC
Sbjct: 156 ILGPVSCNC 130
Score = 137 bits (293), Expect = 8e-032
Identities = 72/171 (42%), Positives = 94/171 (54%)
Frame = -2 / +3
Query: 611 SSIXWL**RAXPPXXVHTMHCXXELIDRTLHCCS*HSPISCYCSCKIPQ*IPGNSERQGR 432
S WL R V MHC EL +RTLHCCS S + CSCKIP + G+SE +G
Sbjct: 3 SCASWLRRRVESSSKVQQMHCRWELSNRTLHCCSQFSLSTRLCSCKIPDQVSGSSEGEGW 182
Query: 431 DSS*LQLV*TFYKLN*RSKSSAKGQGLPYWLVS*SINKWAISKDNARHCERPATKFHT*T 252
SS QLV Y+LN*R SS+K QGLP WLV +K A+ DNAR CER + H+
Sbjct: 183 YSSGFQLVRGSYQLN*RPSSSSKSQGLPCWLVCRPADKRALPTDNARPCEREVAQVHSC* 362
Query: 251 GQASQGLIRLFRDQSIYYILHCRSTNSSAGTTELLVRLGRPILLSKEWRAN 99
GL L+ DQS++ H ++A +L RL + L ++W+A+
Sbjct: 363 S*NGHGLRGLYWDQSVHS*PHEGPEIAAADADQLFSRLAGYLCL*EKWQAD 515
Score = 126 bits (269), Expect = 2e-028
Identities = 77/168 (45%), Positives = 93/168 (55%)
Frame = -1 / +2
Query: 600 LVMIKGXXPLXGAHNALXVXTHRQNLTLLFITFSYLMLLQLQDTAINTRQLRKARSG*FL 421
LV G L GA NAL V T +QNLTLL FS ++QLQDT + RQLR+ R *F
Sbjct: 14 LVTT*GRILLKGAANALPVGTQQQNLTLLLTIFS*HTVMQLQDTGPSIRQLRRGRLV*FW 193
Query: 420 TSTGMNLLQTQLKIKKQRKGPGTSILVGFLIH**MGNIQR*CKTL*KTGYQVSHLNRPS* 241
STG LL TQLK K+Q K PGTS+L G ** G R*CKTL*K G S L +
Sbjct: 194 ISTGTRLLPTQLKTKQQLKEPGTSMLAGLSTR**TGITHR*CKTL*KRGCPSSLLLKLKW 373
Query: 240 SRAHQTISGSINILHTTLQINKLLRRDHRATRPTGASNITFKGMACKL 97
S A +TI GSI+ + + R A +P G + + MA +L
Sbjct: 374 SWAPRTILGSISTQLAS*RARNCCSRRRPAIQPIGRLPMPLREMASRL 517
Score = 118 bits (253), Expect = 3e-026
Identities = 66/131 (50%), Positives = 78/131 (59%)
Frame = +1 / -1
Query: 208 D*SRNSLMSP*LAWPVQV*NLVAGLSQCLALSLDIAHLLMDQETNQYGSPWPFALLFDLQ 387
D*S+ S SP* Q * LSQ LALS+ A L ++T+Q+GSPW F LL LQ
Sbjct: 406 D*SQYSPRSP*PF*LQQE*TWATSLSQGLALSVGNARLSAGRQTSQHGSPWLFELLLGLQ 227
Query: 388 LSL*KVHTS*SQELSRPCLSELPGIYCGILQLQ*HEIGECYEQQCKVLSMSSHXQCIVCT 567
LS *+ TS*+ EL +P SELP + GILQL + E EQQCKVL +SSH QCI CT
Sbjct: 226 LSW*EPRTS*NPELYQPSPSELPDTWSGILQLHNRVLRENCEQQCKVLLLSSHRQCICCT 47
Query: 568 XXGGXALYHNQ 600
L NQ
Sbjct: 46 FEEDSTLRRNQ 14
>gb|AV916601.1|AV916601 AV916601 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags17p13 5', mRNA sequence
Length = 640
Score = 294 bits (636), Expect = 4e-079
Identities = 116/165 (70%), Positives = 129/165 (78%)
Frame = -3 / +2
Query: 694 IXXDYAXXXFKTXXXRVKXWXXLXEPRIVAXXGYDKGLXPPXXCTQCTAXXNSSTEPYIV 515
+ DYA FKT RVK W EPRIVA GYD G PP C++CTA NS+TEPYIV
Sbjct: 140 LFADYADFCFKTFGDRVKHWFTFNEPRIVALLGYDVGSNPPQRCSKCTAGGNSATEPYIV 319
Query: 514 VHNILLSHATAVARYRNKYQATQKGKVGIVLDFNWYEPFTNSTEDQKAAQRARDFHIGWF 335
HN LL+H AVARYR KYQA QKGKVGIVLDFNWYE TNSTEDQ AAQRARDFH+GWF
Sbjct: 320 AHNFLLAHGYAVARYRTKYQAAQKGKVGIVLDFNWYEALTNSTEDQAAAQRARDFHVGWF 499
Query: 334 LDPLINGQYPKIMQDIVKDRLPSFTPEQAKLVKGSSDYFGINQYT 200
+DPLING YP+IMQD+VK+RLP FTP +AK+V GS+DY GINQYT
Sbjct: 500 VDPLINGHYPQIMQDLVKERLPKFTPAEAKMVMGSADYIGINQYT 634
Score = 215 bits (464), Expect = 2e-055
Identities = 108/162 (66%), Positives = 117/162 (72%)
Frame = +3 / -2
Query: 201 VY*LIPK*SDEPLTSLACSGVKLGSRSFTMSCIIFGYCPFINGSRNQPIWKSLALCAAF* 380
VY*LIP *S EP+T LA +GV LG+ SFT SCII G CPFI+GS NQP WKSLAL AA
Sbjct: 633 VY*LIPI*SAEPMTILASAGVNLGNLSFTRSCIICG*CPFISGSTNQPTWKSLAL*AAAW 454
Query: 381 SSVEFVKGSYQLKSRTIPTLPF*VAWYLLRYLATAVA*DRRML*TTM*GSVDEFXXAVHC 560
SSVE V+ SYQLKSRTIPT PF* A YL+RYLATA +R L* TM*GSV EF AVH
Sbjct: 453 SSVELVRASYQLKSRTIPTFPF*AA*YLVRYLATA*PCAKRKL*ATM*GSVAEFPPAVHL 274
Query: 561 VHXXGGXSPLS*PXNATILGSXNXXQXLTRXXXVLKXXSA*S 686
+H GG P S*P +ATILGS N Q TR VLK SA*S
Sbjct: 273 LHL*GGFDPTS*PRSATILGSLNVNQCFTRSPKVLKQKSA*S 148
Score = 144 bits (310), Expect = 4e-034
Identities = 75/161 (46%), Positives = 90/161 (55%)
Frame = -2 / +1
Query: 683 LC*XXFQDXXXSSQXLXXIX*AKDSSIXWL**RAXPPXXVHTMHCXXELIDRTLHCCS*H 504
LC* F D S + L I * KDS WL R V MHC EL +RTLHCCS
Sbjct: 151 LC*LLF*DLWRSCKALVYIQ*TKDSCASWLRRRVESSSKVQQMHCRWELSNRTLHCCSQF 330
Query: 503 SPISCYCSCKIPQ*IPGNSERQGRDSS*LQLV*TFYKLN*RSKSSAKGQGLPYWLVS*SI 324
S + CSCKIP + G+SE +G SS QLV Y+LN*R SS+K QGLP WLV
Sbjct: 331 SLSTRLCSCKIPDQVSGSSEGEGWYSSGFQLVRGSYQLN*RPSSSSKSQGLPCWLVCRPA 510
Query: 323 NKWAISKDNARHCERPATKFHT*TGQASQGLIRLFRDQSIY 201
+K A+ DNAR CER + H+ GL L+ DQS++
Sbjct: 511 DKRALPTDNARPCEREVAQVHSC*S*NGHGLRGLYWDQSVH 633
Score = 134 bits (287), Expect = 5e-031
Identities = 81/160 (50%), Positives = 92/160 (57%)
Frame = -1 / +3
Query: 684 TMLXXVSRXXXXESXTGXXXMSQG**HXLVMIKGXXPLXGAHNALXVXTHRQNLTLLFIT 505
TML V R TG M+QG* LV G L GA NAL V T +QNLTLL
Sbjct: 150 TMLTFVLRPLAIV*STGLHSMNQG*LRFLVTT*GRILLKGAANALPVGTQQQNLTLLLTI 329
Query: 504 FSYLMLLQLQDTAINTRQLRKARSG*FLTSTGMNLLQTQLKIKKQRKGPGTSILVGFLIH 325
FS ++QLQDT + RQLR+ R *F STG LL TQLK K+Q K PGTS+L G
Sbjct: 330 FS*HTVMQLQDTGPSIRQLRRGRLV*FWISTGTRLLPTQLKTKQQLKEPGTSMLAGLSTR 509
Query: 324 **MGNIQR*CKTL*KTGYQVSHLNRPS*SRAHQTISGSIN 205
** G R*CKTL*K G S L + S A +TI GSI+
Sbjct: 510 **TGITHR*CKTL*KRGCPSSLLLKLKWSWAPRTILGSIS 629
Score = 127 bits (271), Expect(2) = 1e-037
Identities = 52/94 (55%), Positives = 64/94 (68%)
Frame = +2 / -1
Query: 203 ILIDPEIV**ALD*LGLFRCETW*PVFHNVLHYLWILPIY*WIKKPTNMEVPGPLRCFLI 382
+LIDP IV A D R E P+FH VLHYLW++P+Y + KP NMEVPG L C L+
Sbjct: 631 VLIDPNIVRGAHDHFSFSRSELGQPLFHKVLHYLWVMPVYQRVDKPANMEVPGSLSCCLV 452
Query: 383 FS*VCKRFIPVEVKNYPDLAFLSCLVFIAVSCNC 484
FS*V K +PVE++NY +L LSCL+ VSCNC
Sbjct: 451 FS*VGKSLVPVEIQNYTNLPLLSCLILGPVSCNC 350
Score = 126 bits (269), Expect = 2e-028
Identities = 70/139 (50%), Positives = 82/139 (58%)
Frame = +1 / -3
Query: 208 D*SRNSLMSP*LAWPVQV*NLVAGLSQCLALSLDIAHLLMDQETNQYGSPWPFALLFDLQ 387
D*S+ S SP* Q * LSQ LALS+ A L ++T+Q+GSPW F LL LQ
Sbjct: 626 D*SQYSPRSP*PF*LQQE*TWATSLSQGLALSVGNARLSAGRQTSQHGSPWLFELLLGLQ 447
Query: 388 LSL*KVHTS*SQELSRPCLSELPGIYCGILQLQ*HEIGECYEQQCKVLSMSSHXQCIVCT 567
LS *+ TS*+ EL +P SELP + GILQL + E EQQCKVL +SSH QCI CT
Sbjct: 446 LSW*EPRTS*NPELYQPSPSELPDTWSGILQLHNRVLRENCEQQCKVLLLSSHRQCICCT 267
Query: 568 XXGGXALYHNQXMLLSLAH 624
L NQ LSL H
Sbjct: 266 FEEDSTLRRNQEAQLSLVH 210
Score = 49.6 bits (102), Expect(2) = 1e-037
Identities = 23/53 (43%), Positives = 29/53 (54%)
Frame = +2 / -1
Query: 527 FCR*VXTXSALCAPXRGXKPFIITXXCYYPWLX*XXPVLDSXXXXLETXXSIV 685
FC *V T SA AP R +P+++T YPW PVL + L+T SIV
Sbjct: 307 FCC*VPTGSAFAAPLRRIRPYVVTKKRNYPWFIECKPVLYTIAKGLKTKVSIV 149
>gb|BU970797.1|BU970797 HB15L12r BC Hordeum vulgare subsp. vulgare cDNA clone HB15L12
5-PRIME, mRNA sequence
Length = 587
Score = 288 bits (624), Expect = 2e-077
Identities = 113/194 (58%), Positives = 138/194 (71%)
Frame = -3 / +3
Query: 649 RVKXWXXLXEPRIVAXXGYDKGLXPPXXCTQCTAXXNSSTEPYIVVHNILLSHATAVARY 470
R K W EPR+VA GYD G P C++C A +S TEPYIV HNI+LSHA AV RY
Sbjct: 6 RGKNWFTFNEPRVVAALGYDNGFHAPGRCSKCPAGGDSRTEPYIVTHNIILSHAAAVQRY 185
Query: 469 RNKYQATQKGKVGIVLDFNWYEPFTNSTEDQKAAQRARDFHIGWFLDPLINGQYPKIMQD 290
R KYQ QKG++GI+LDF WYEP ++S DQ AAQRARDFHIGWFLDP+ NG+YP M
Sbjct: 186 REKYQPHQKGRIGILLDFVWYEPHSDSNADQAAAQRARDFHIGWFLDPITNGRYPSSMLK 365
Query: 289 IVKDRLPSFTPEQAKLVKGSSDYFGINQYTTYYIADQQTPPQGPPSYSSDWGVQYYFQRN 110
IV +RLP F+ +++++VKGS DY GINQYT+YY+ D Q P SY DW V + ++RN
Sbjct: 366 IVGNRLPGFSADESRMVKGSIDYVGINQYTSYYMKDPGAWNQTPVSYQDDWHVGFVYERN 545
Query: 109 GVQIGQMAHSIWLY 68
GV IG A+S WLY
Sbjct: 546 GVPIGPRANSDWLY 587
Score = 129 bits (277), Expect = 1e-029
Identities = 76/156 (48%), Positives = 87/156 (55%)
Frame = +3 / -2
Query: 183 SAM*YVVY*LIPK*SDEPLTSLACSGVKLGSRSFTMSCIIFGYCPFINGSRNQPIWKSLA 362
S M* VY LIP *S EP T L S +K G+ T+ I G P + GSRN P+WKSLA
Sbjct: 472 SFM**EVYWLIPT*SMEPFTILDSSALKPGNLFPTILSIDDG*RPLVMGSRNHPMWKSLA 293
Query: 363 LCAAF*SSVEFVKGSYQLKSRTIPTLPF*VAWYLLRYLATAVA*DRRML*TTM*GSVDEF 542
LCAA *S++ + GSY KS+ IP LPF Y RY TA A +R +L TM GSV E
Sbjct: 292 LCAAA*SALLSL*GSYHTKSKRIPILPFWCG*YFSRYRCTAAACERMILCVTMYGSVLES 113
Query: 543 XXAVHCVHXXGGXSPLS*PXNATILGSXNXXQXLTR 650
A H H G PLS P AT LGS Q R
Sbjct: 112 PPAGHLEHLPGAWKPLSYPRAATTLGSLKVNQFFPR 5
>gb|BQ464272.1|BQ464272 HF01M24T HF Hordeum vulgare subsp. vulgare cDNA clone HF01M24
5-PRIME, mRNA sequence
Length = 678
Score = 281 bits (609), Expect = 2e-075
Identities = 111/186 (59%), Positives = 137/186 (73%)
Frame = -3 / +1
Query: 574 PXXCTQCTAXXNSSTEPYIVVHNILLSHATAVARYRNKYQATQKGKVGIVLDFNWYEPFT 395
P C++C A +S TEPYIV HNI+LSHA AV RYR KYQ QKG++GI+LDF WYEP +
Sbjct: 1 PGRCSKCPAGGDSRTEPYIVTHNIILSHAAAVQRYREKYQPHQKGRIGILLDFVWYEPHS 180
Query: 394 NSTEDQKAAQRARDFHIGWFLDPLINGQYPKIMQDIVKDRLPSFTPEQAKLVKGSSDYFG 215
+S DQ AAQRARDFHIGWFLDP+ NG+YP M IV +RLP F+ +++++VKGS DY G
Sbjct: 181 DSNADQAAAQRARDFHIGWFLDPITNGRYPSSMLKIVGNRLPGFSADESRMVKGSIDYVG 360
Query: 214 INQYTTYYIADQQTPPQGPPSYSSDWGVQYYFQRNGVQIGQMAHSIWLYIVPSGMYGVVN 35
INQYT+YY+ D Q P SY DW V + ++RNGV IG A+S WLYIVP GM V
Sbjct: 361 INQYTSYYMKDPGAWNQTPVSYQDDWHVGFVYERNGVPIGPRANSDWLYIVPWGMNKAVT 540
Query: 34 YLKEKY 17
Y+KE+Y
Sbjct: 541 YVKERY 558
Score = 110 bits (234), Expect(2) = 1e-028
Identities = 64/128 (50%), Positives = 75/128 (58%)
Frame = +3 / -2
Query: 183 SAM*YVVY*LIPK*SDEPLTSLACSGVKLGSRSFTMSCIIFGYCPFINGSRNQPIWKSLA 362
S M* VY LIP *S EP T L S +K G+ T+ I G P + GSRN P+WKSLA
Sbjct: 392 SFM**EVYWLIPT*SMEPFTILDSSALKPGNLFPTILSIDDG*RPLVMGSRNHPMWKSLA 213
Query: 363 LCAAF*SSVEFVKGSYQLKSRTIPTLPF*VAWYLLRYLATAVA*DRRML*TTM*GSVDEF 542
LCAA *S++ + GSY KS+ IP LPF Y RY TA A +R +L TM GSV E
Sbjct: 212 LCAAA*SALLSL*GSYHTKSKRIPILPFWCG*YFSRYRCTAAACERMILCVTMYGSVLES 33
Query: 543 XXAVHCVH 566
A H H
Sbjct: 32 PPAGHLEH 9
Score = 36.3 bits (73), Expect(2) = 1e-028
Identities = 18/32 (56%), Positives = 20/32 (62%)
Frame = +3 / -2
Query: 18 YFSFR*FTTPYMPDGTM*SQIECAICPICTPF 113
Y S * T ++P GTM*SQ E A PI TPF
Sbjct: 557 YLSLT*VTALFIPHGTM*SQSEFARGPIGTPF 462
>gb|BI948619.1|BI948619 HVSMEl0010E10f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0010E10f, mRNA sequence
Length = 1046
Score = 274 bits (592), Expect = 5e-073
Identities = 108/182 (59%), Positives = 135/182 (74%)
Frame = -3 / +1
Query: 562 TQCTAXXNSSTEPYIVVHNILLSHATAVARYRNKYQATQKGKVGIVLDFNWYEPFTNSTE 383
++C A +S TEPYIV HNI+LSHA AV RYR KYQ QKG++GI+LDF WYEP ++S
Sbjct: 1 SKCPAGGDSRTEPYIVTHNIILSHAAAVQRYREKYQPHQKGRIGILLDFVWYEPHSDSNA 180
Query: 382 DQKAAQRARDFHIGWFLDPLINGQYPKIMQDIVKDRLPSFTPEQAKLVKGSSDYFGINQY 203
DQ AAQRARDFHIGWFLDP+ NG+YP M IV +RLP F+ +++++VKGS DY GINQY
Sbjct: 181 DQAAAQRARDFHIGWFLDPITNGRYPSSMLKIVGNRLPGFSADESRMVKGSIDYVGINQY 360
Query: 202 TTYYIADQQTPPQGPPSYSSDWGVQYYFQRNGVQIGQMAHSIWLYIVPSGMYGVVNYLKE 23
T+YY+ D Q P SY DW V + ++RNGV IG A+S WLYIVP GM V Y+KE
Sbjct: 361 TSYYMKDPGAWNQTPASYQDDWHVGFVYERNGVPIGPRANSDWLYIVPWGMNKAVTYVKE 540
Query: 22 KY 17
++
Sbjct: 541 RF 546
Score = 107 bits (229), Expect(2) = 4e-027
Identities = 63/125 (50%), Positives = 74/125 (59%)
Frame = +3 / -1
Query: 183 SAM*YVVY*LIPK*SDEPLTSLACSGVKLGSRSFTMSCIIFGYCPFINGSRNQPIWKSLA 362
S M* VY LIP *S EP T L S +K G+ T+ I G P + GSRN P+WKSLA
Sbjct: 380 SFM**EVYWLIPT*SMEPFTILDSSALKPGNLFPTILSIDDG*RPLVMGSRNHPMWKSLA 201
Query: 363 LCAAF*SSVEFVKGSYQLKSRTIPTLPF*VAWYLLRYLATAVA*DRRML*TTM*GSVDEF 542
LCAA *S++ + GSY KS+ IP LPF Y RY TA A +R +L TM GSV E
Sbjct: 200 LCAAA*SALLSL*GSYHTKSKRIPILPFWCG*YFSRYRCTAAACERMILCVTMYGSVLES 21
Query: 543 XXAVH 557
A H
Sbjct: 20 PPAGH 6
Score = 33.1 bits (66), Expect(2) = 4e-027
Identities = 17/30 (56%), Positives = 19/30 (63%)
Frame = +3 / -1
Query: 24 SFR*FTTPYMPDGTM*SQIECAICPICTPF 113
S * T ++P GTM*SQ E A PI TPF
Sbjct: 539 SLT*VTALFIPHGTM*SQSEFARGPIGTPF 450
>gb|AV916609.1|AV916609 AV916609 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags19a05 5', mRNA sequence
Length = 535
Score = 273 bits (590), Expect = 9e-073
Identities = 108/156 (69%), Positives = 121/156 (77%)
Frame = -3 / +2
Query: 694 IXXDYAXXXFKTXXXRVKXWXXLXEPRIVAXXGYDKGLXPPXXCTQCTAXXNSSTEPYIV 515
+ DYA FKT RVK W EPRIVA GYD G PP C++CTA NS+TEPYIV
Sbjct: 68 LFADYADFCFKTFGDRVKHWFTFNEPRIVALLGYDVGSNPPQRCSKCTAGGNSATEPYIV 247
Query: 514 VHNILLSHATAVARYRNKYQATQKGKVGIVLDFNWYEPFTNSTEDQKAAQRARDFHIGWF 335
HN LL+H AVARYR KYQA QKGKVGIVLDFNWYE TNSTEDQ AAQRARDFH+GWF
Sbjct: 248 AHNFLLAHGYAVARYRTKYQAAQKGKVGIVLDFNWYEALTNSTEDQAAAQRARDFHVGWF 427
Query: 334 LDPLINGQYPKIMQDIVKDRLPSFTPEQAKLVKGSS 227
+DPLING YP+IMQD+VK+RLP FTP +AK+V GS+
Sbjct: 428 VDPLINGHYPQIMQDLVKERLPKFTPAEAKMVMGSA 535
Score = 203 bits (437), Expect = 1e-051
Identities = 100/152 (65%), Positives = 109/152 (71%)
Frame = +3 / -2
Query: 231 EPLTSLACSGVKLGSRSFTMSCIIFGYCPFINGSRNQPIWKSLALCAAF*SSVEFVKGSY 410
EP+T LA +GV LG+ SFT SCII G CPFI+GS NQP WKSLAL AA SSVE V+ SY
Sbjct: 531 EPMTILASAGVNLGNLSFTRSCIICG*CPFISGSTNQPTWKSLAL*AAAWSSVELVRASY 352
Query: 411 QLKSRTIPTLPF*VAWYLLRYLATAVA*DRRML*TTM*GSVDEFXXAVHCVHXXGGXSPL 590
QLKSRTIPT PF* A YL+RYLATA +R L* TM*GSV EF AVH +H GG P
Sbjct: 351 QLKSRTIPTFPF*AA*YLVRYLATA*PCAKRKL*ATM*GSVAEFPPAVHLLHL*GGFDPT 172
Query: 591 S*PXNATILGSXNXXQXLTRXXXVLKXXSA*S 686
S*P +ATILGS N Q TR VLK SA*S
Sbjct: 171 S*PRSATILGSLNVNQCFTRSPKVLKQKSA*S 76
Score = 138 bits (295), Expect = 4e-032
Identities = 69/142 (48%), Positives = 81/142 (57%)
Frame = -2 / +1
Query: 683 LC*XXFQDXXXSSQXLXXIX*AKDSSIXWL**RAXPPXXVHTMHCXXELIDRTLHCCS*H 504
LC* F D S + L I * KDS WL R V MHC EL +RTLHCCS
Sbjct: 79 LC*LLF*DLWRSCKALVYIQ*TKDSCASWLRRRVESSSKVQQMHCRWELSNRTLHCCSQF 258
Query: 503 SPISCYCSCKIPQ*IPGNSERQGRDSS*LQLV*TFYKLN*RSKSSAKGQGLPYWLVS*SI 324
S + CSCKIP + G+SE +G SS QLV Y+LN*R SS+K QGLP WLV
Sbjct: 259 SLSTRLCSCKIPDQVSGSSEGEGWYSSGFQLVRGSYQLN*RPSSSSKSQGLPCWLVCRPA 438
Query: 323 NKWAISKDNARHCERPATKFHT 258
+K A+ DNAR CER + H+
Sbjct: 439 DKRALPTDNARPCEREVAQVHS 504
Score = 126 bits (269), Expect = 2e-028
Identities = 72/137 (52%), Positives = 80/137 (58%)
Frame = -1 / +3
Query: 684 TMLXXVSRXXXXESXTGXXXMSQG**HXLVMIKGXXPLXGAHNALXVXTHRQNLTLLFIT 505
TML V R TG M+QG* LV G L GA NAL V T +QNLTLL
Sbjct: 78 TMLTFVLRPLAIV*STGLHSMNQG*LRFLVTT*GRILLKGAANALPVGTQQQNLTLLLTI 257
Query: 504 FSYLMLLQLQDTAINTRQLRKARSG*FLTSTGMNLLQTQLKIKKQRKGPGTSILVGFLIH 325
FS ++QLQDT + RQLR+ R *F STG LL TQLK K+Q K PGTS+L G
Sbjct: 258 FS*HTVMQLQDTGPSIRQLRRGRLV*FWISTGTRLLPTQLKTKQQLKEPGTSMLAGLSTR 437
Query: 324 **MGNIQR*CKTL*KTG 274
** G R*CKTL*K G
Sbjct: 438 **TGITHR*CKTL*KRG 488
Score = 122 bits (261), Expect = 2e-027
Identities = 63/123 (51%), Positives = 74/123 (60%)
Frame = +1 / -3
Query: 256 QV*NLVAGLSQCLALSLDIAHLLMDQETNQYGSPWPFALLFDLQLSL*KVHTS*SQELSR 435
Q * LSQ LALS+ A L ++T+Q+GSPW F LL LQLS *+ TS*+ EL +
Sbjct: 506 QE*TWATSLSQGLALSVGNARLSAGRQTSQHGSPWLFELLLGLQLSW*EPRTS*NPELYQ 327
Query: 436 PCLSELPGIYCGILQLQ*HEIGECYEQQCKVLSMSSHXQCIVCTXXGGXALYHNQXMLLS 615
P SELP + GILQL + E EQQCKVL +SSH QCI CT L NQ LS
Sbjct: 326 PSPSELPDTWSGILQLHNRVLRENCEQQCKVLLLSSHRQCICCTFEEDSTLRRNQEAQLS 147
Query: 616 LAH 624
L H
Sbjct: 146 LVH 138
Score = 116 bits (247), Expect(2) = 2e-034
Identities = 46/84 (54%), Positives = 57/84 (67%)
Frame = +2 / -1
Query: 233 ALD*LGLFRCETW*PVFHNVLHYLWILPIY*WIKKPTNMEVPGPLRCFLIFS*VCKRFIP 412
A D R E P+FH VLHYLW++P+Y + KP NMEVPG L C L+FS*V K +P
Sbjct: 529 AHDHFSFSRSELGQPLFHKVLHYLWVMPVYQRVDKPANMEVPGSLSCCLVFS*VGKSLVP 350
Query: 413 VEVKNYPDLAFLSCLVFIAVSCNC 484
VE++NY +L LSCL+ VSCNC
Sbjct: 349 VEIQNYTNLPLLSCLILGPVSCNC 278
Score = 49.6 bits (102), Expect(2) = 2e-034
Identities = 23/53 (43%), Positives = 29/53 (54%)
Frame = +2 / -1
Query: 527 FCR*VXTXSALCAPXRGXKPFIITXXCYYPWLX*XXPVLDSXXXXLETXXSIV 685
FC *V T SA AP R +P+++T YPW PVL + L+T SIV
Sbjct: 235 FCC*VPTGSAFAAPLRRIRPYVVTKKRNYPWFIECKPVLYTIAKGLKTKVSIV 77
>gb|BJ464778.1|BJ464778 BJ464778 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags37p13 5', mRNA sequence
Length = 493
Score = 272 bits (589), Expect = 1e-072
Identities = 108/155 (69%), Positives = 120/155 (77%)
Frame = -3 / +2
Query: 694 IXXDYAXXXFKTXXXRVKXWXXLXEPRIVAXXGYDKGLXPPXXCTQCTAXXNSSTEPYIV 515
+ DYA FKT RVK W EPRIVA GYD G PP C++CTA NS+TEPYIV
Sbjct: 29 LFADYADFCFKTFGDRVKHWFTFNEPRIVALLGYDVGSNPPQRCSKCTAGGNSATEPYIV 208
Query: 514 VHNILLSHATAVARYRNKYQATQKGKVGIVLDFNWYEPFTNSTEDQKAAQRARDFHIGWF 335
HN LL+H AVARYR KYQA QKGKVGIVLDFNWYE TNSTEDQ AAQRARDFH+GWF
Sbjct: 209 AHNFLLAHGYAVARYRTKYQAAQKGKVGIVLDFNWYEALTNSTEDQAAAQRARDFHVGWF 388
Query: 334 LDPLINGQYPKIMQDIVKDRLPSFTPEQAKLVKGS 230
+DPLING YP+IMQD+VK+RLP FTP +AK+V GS
Sbjct: 389 VDPLINGHYPQIMQDLVKERLPKFTPAEAKMVMGS 493
Score = 203 bits (437), Expect = 1e-051
Identities = 100/152 (65%), Positives = 109/152 (71%)
Frame = +3 / -2
Query: 231 EPLTSLACSGVKLGSRSFTMSCIIFGYCPFINGSRNQPIWKSLALCAAF*SSVEFVKGSY 410
EP+T LA +GV LG+ SFT SCII G CPFI+GS NQP WKSLAL AA SSVE V+ SY
Sbjct: 492 EPMTILASAGVNLGNLSFTRSCIICG*CPFISGSTNQPTWKSLAL*AAAWSSVELVRASY 313
Query: 411 QLKSRTIPTLPF*VAWYLLRYLATAVA*DRRML*TTM*GSVDEFXXAVHCVHXXGGXSPL 590
QLKSRTIPT PF* A YL+RYLATA +R L* TM*GSV EF AVH +H GG P
Sbjct: 312 QLKSRTIPTFPF*AA*YLVRYLATA*PCAKRKL*ATM*GSVAEFPPAVHLLHL*GGFDPT 133
Query: 591 S*PXNATILGSXNXXQXLTRXXXVLKXXSA*S 686
S*P +ATILGS N Q TR VLK SA*S
Sbjct: 132 S*PRSATILGSLNVNQCFTRSPKVLKQKSA*S 37
Score = 138 bits (295), Expect = 4e-032
Identities = 69/142 (48%), Positives = 81/142 (57%)
Frame = -2 / +1
Query: 683 LC*XXFQDXXXSSQXLXXIX*AKDSSIXWL**RAXPPXXVHTMHCXXELIDRTLHCCS*H 504
LC* F D S + L I * KDS WL R V MHC EL +RTLHCCS
Sbjct: 40 LC*LLF*DLWRSCKALVYIQ*TKDSCASWLRRRVESSSKVQQMHCRWELSNRTLHCCSQF 219
Query: 503 SPISCYCSCKIPQ*IPGNSERQGRDSS*LQLV*TFYKLN*RSKSSAKGQGLPYWLVS*SI 324
S + CSCKIP + G+SE +G SS QLV Y+LN*R SS+K QGLP WLV
Sbjct: 220 SLSTRLCSCKIPDQVSGSSEGEGWYSSGFQLVRGSYQLN*RPSSSSKSQGLPCWLVCRPA 399
Query: 323 NKWAISKDNARHCERPATKFHT 258
+K A+ DNAR CER + H+
Sbjct: 400 DKRALPTDNARPCEREVAQVHS 465
Score = 126 bits (269), Expect = 2e-028
Identities = 72/137 (52%), Positives = 80/137 (58%)
Frame = -1 / +3
Query: 684 TMLXXVSRXXXXESXTGXXXMSQG**HXLVMIKGXXPLXGAHNALXVXTHRQNLTLLFIT 505
TML V R TG M+QG* LV G L GA NAL V T +QNLTLL
Sbjct: 39 TMLTFVLRPLAIV*STGLHSMNQG*LRFLVTT*GRILLKGAANALPVGTQQQNLTLLLTI 218
Query: 504 FSYLMLLQLQDTAINTRQLRKARSG*FLTSTGMNLLQTQLKIKKQRKGPGTSILVGFLIH 325
FS ++QLQDT + RQLR+ R *F STG LL TQLK K+Q K PGTS+L G
Sbjct: 219 FS*HTVMQLQDTGPSIRQLRRGRLV*FWISTGTRLLPTQLKTKQQLKEPGTSMLAGLSTR 398
Query: 324 **MGNIQR*CKTL*KTG 274
** G R*CKTL*K G
Sbjct: 399 **TGITHR*CKTL*KRG 449
Score = 122 bits (261), Expect = 2e-027
Identities = 63/123 (51%), Positives = 74/123 (60%)
Frame = +1 / -3
Query: 256 QV*NLVAGLSQCLALSLDIAHLLMDQETNQYGSPWPFALLFDLQLSL*KVHTS*SQELSR 435
Q * LSQ LALS+ A L ++T+Q+GSPW F LL LQLS *+ TS*+ EL +
Sbjct: 467 QE*TWATSLSQGLALSVGNARLSAGRQTSQHGSPWLFELLLGLQLSW*EPRTS*NPELYQ 288
Query: 436 PCLSELPGIYCGILQLQ*HEIGECYEQQCKVLSMSSHXQCIVCTXXGGXALYHNQXMLLS 615
P SELP + GILQL + E EQQCKVL +SSH QCI CT L NQ LS
Sbjct: 287 PSPSELPDTWSGILQLHNRVLRENCEQQCKVLLLSSHRQCICCTFEEDSTLRRNQEAQLS 108
Query: 616 LAH 624
L H
Sbjct: 107 LVH 99
Score = 116 bits (247), Expect(2) = 2e-034
Identities = 46/84 (54%), Positives = 57/84 (67%)
Frame = +2 / -1
Query: 233 ALD*LGLFRCETW*PVFHNVLHYLWILPIY*WIKKPTNMEVPGPLRCFLIFS*VCKRFIP 412
A D R E P+FH VLHYLW++P+Y + KP NMEVPG L C L+FS*V K +P
Sbjct: 490 AHDHFSFSRSELGQPLFHKVLHYLWVMPVYQRVDKPANMEVPGSLSCCLVFS*VGKSLVP 311
Query: 413 VEVKNYPDLAFLSCLVFIAVSCNC 484
VE++NY +L LSCL+ VSCNC
Sbjct: 310 VEIQNYTNLPLLSCLILGPVSCNC 239
Score = 49.6 bits (102), Expect(2) = 2e-034
Identities = 23/53 (43%), Positives = 29/53 (54%)
Frame = +2 / -1
Query: 527 FCR*VXTXSALCAPXRGXKPFIITXXCYYPWLX*XXPVLDSXXXXLETXXSIV 685
FC *V T SA AP R +P+++T YPW PVL + L+T SIV
Sbjct: 196 FCC*VPTGSAFAAPLRRIRPYVVTKKRNYPWFIECKPVLYTIAKGLKTKVSIV 38
>gb|BJ464115.1|BJ464115 BJ464115 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags31o15 5', mRNA sequence
Length = 523
Score = 263 bits (569), Expect(2) = 2e-072
Identities = 104/147 (70%), Positives = 118/147 (80%)
Frame = -3 / +1
Query: 472 YRNKYQATQKGKVGIVLDFNWYEPFTNSTEDQKAAQRARDFHIGWFLDPLINGQYPKIMQ 293
YR KYQA QKGKVGIVLDFNWYE TNSTEDQ AAQRARDFH+GWF+DPLING YP+IMQ
Sbjct: 82 YRTKYQAAQKGKVGIVLDFNWYEALTNSTEDQAAAQRARDFHVGWFVDPLINGHYPQIMQ 261
Query: 292 DIVKDRLPSFTPEQAKLVKGSSDYFGINQYTTYYIADQQTPPQGPPSYSSDWGVQYYFQR 113
D+VK+RLP FTP +AK+V GS+DY GINQYT + Q+ Q P SYS+DW V Y F+R
Sbjct: 262 DLVKERLPKFTPAEAKMVMGSADYIGINQYTASLMKGQKLLQQTPTSYSADWQVTYAFER 441
Query: 112 NGVQIGQMAHSIWLYIVPSGMYGVVNY 32
NG IG A+S WLYIVPSGMYG V+Y
Sbjct: 442 NGKPIGPKANSNWLYIVPSGMYGCVHY 522
Score = 184 bits (396), Expect = 5e-046
Identities = 94/150 (62%), Positives = 102/150 (68%)
Frame = +3 / -3
Query: 39 TTPYMPDGTM*SQIECAICPICTPFL*K*YWTPQSDE*LGGPCGGVC*SAM*YVVY*LIP 218
T PY+PDGTM*SQ E A PI PFL K T QS E*L G C M VY*LIP
Sbjct: 515 THPYIPDGTM*SQFEFAFGPIGLPFLSKA*VTCQSAE*LVGVCCSNFWPFMRLAVY*LIP 336
Query: 219 K*SDEPLTSLACSGVKLGSRSFTMSCIIFGYCPFINGSRNQPIWKSLALCAAF*SSVEFV 398
*S EP+T LA +GV LG+ SFT SCII G CPFI+GS NQP WKSLAL AA SSVE V
Sbjct: 335 I*SAEPMTILASAGVNLGNLSFTRSCIICG*CPFISGSTNQPTWKSLAL*AAAWSSVELV 156
Query: 399 KGSYQLKSRTIPTLPF*VAWYLLRYLATAV 488
+ SYQLKSRTIPT PF* A YL+RY +
Sbjct: 155 RASYQLKSRTIPTFPF*AA*YLVRYXCNCI 66
Score = 157 bits (337), Expect = 7e-038
Identities = 71/143 (49%), Positives = 90/143 (62%)
Frame = +2 / -2
Query: 32 VVHDSIHARWDDVKPN*VRHLSNLHAIPLKVILDAPVGRVARWSLRRSLLICNVVCSILI 211
VVH IH RWDDV+P +R SN AI LK I + P+G +A L + L + +LI
Sbjct: 522 VVHAPIHPRWDDVEPVRIRLWSNRLAISLKGIGNLPIG*IAGRRLLQQFLALHEASCVLI 343
Query: 212 DPEIV**ALD*LGLFRCETW*PVFHNVLHYLWILPIY*WIKKPTNMEVPGPLRCFLIFS* 391
DP IV A D R E P+FH VLHYLW++P+Y + KP NMEVPG L C L+FS*
Sbjct: 342 DPNIVRGAHDHFSFSRSELGQPLFHKVLHYLWVMPVYQRVDKPANMEVPGSLSCCLVFS* 163
Query: 392 VCKRFIPVEVKNYPDLAFLSCLV 460
V K +PVE++NY +L LSCL+
Sbjct: 162 VGKSLVPVEIQNYTNLPLLSCLI 94
Score = 129 bits (277), Expect = 1e-029
Identities = 66/152 (43%), Positives = 86/152 (56%)
Frame = -2 / +3
Query: 488 YCSCKIPQ*IPGNSERQGRDSS*LQLV*TFYKLN*RSKSSAKGQGLPYWLVS*SINKWAI 309
Y IP + G+SE +G SS QLV Y+LN*R SS+K QGLP WLV +K A+
Sbjct: 66 YAVAXIPDQVSGSSEGEGWYSSGFQLVRGSYQLN*RPSSSSKSQGLPCWLVCRPADKRAL 245
Query: 308 SKDNARHCERPATKFHT*TGQASQGLIRLFRDQSIYYILHCRSTNSSAGTTELLVRLGRP 129
DNAR CER + H+ GL L+ DQS++ H ++A +L RL
Sbjct: 246 PTDNARPCEREVAQVHSC*S*NGHGLRGLYWDQSVHS*PHEGPEIAAADADQLFSRLAGY 425
Query: 128 ILLSKEWRANWTDGALNLALHRPIGHVWSREL 33
+ L ++W+A+WT G LALHRPIG VW R L
Sbjct: 426 LCL*EKWQADWTKGEFELALHRPIGDVWVRAL 521
Score = 112 bits (239), Expect = 2e-024
Identities = 66/147 (44%), Positives = 82/147 (55%)
Frame = -1 / +2
Query: 471 TAINTRQLRKARSG*FLTSTGMNLLQTQLKIKKQRKGPGTSILVGFLIH**MGNIQR*CK 292
T + RQLR+ R *F STG LL TQLK K+Q K PGTS+L G ** G R*CK
Sbjct: 83 TGPSIRQLRRGRLV*FWISTGTRLLPTQLKTKQQLKEPGTSMLAGLSTR**TGITHR*CK 262
Query: 291 TL*KTGYQVSHLNRPS*SRAHQTISGSINILHTTLQINKLLRRDHRATRPTGASNITFKG 112
TL*K G S L + S A +TI GSI+ + + R A +P G + +
Sbjct: 263 TL*KRGCPSSLLLKLKWSWAPRTILGSISTQLAS*RARNCCSRRRPAIQPIGRLPMPLRE 442
Query: 111 MACKLDRWRTQFGFTSSHRACMES*TT 31
MA +LD+ R + G TSSHR CM + TT
Sbjct: 443 MASRLDQRRIRTGSTSSHRGCMGACTT 523
Score = 29.0 bits (57), Expect(2) = 2e-072
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -2 / +2
Query: 527 TLHCCS*HSPISCYCSCK 474
TLHCCS S + CSCK
Sbjct: 26 TLHCCSQFSLSTRLCSCK 79
>gb|BG367505.2|BG367505 HVSMEi0012I04f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0012I04f, mRNA sequence
Length = 692
Score = 268 bits (579), Expect = 3e-071
Identities = 106/172 (61%), Positives = 129/172 (75%)
Frame = -3 / +2
Query: 532 TEPYIVVHNILLSHATAVARYRNKYQATQKGKVGIVLDFNWYEPFTNSTEDQKAAQRARD 353
TEPYIV HNI+LSHA AV RYR KYQ QKG++GI+LDF WYEP ++S DQ AAQRARD
Sbjct: 5 TEPYIVTHNIILSHAAAVQRYREKYQPHQKGRIGILLDFVWYEPHSDSNADQAAAQRARD 184
Query: 352 FHIGWFLDPLINGQYPKIMQDIVKDRLPSFTPEQAKLVKGSSDYFGINQYTTYYIADQQT 173
FHIGWFLDP+ NG+YP M IV +RLP F+ +++++VKGS DY GINQYT+YY+ D
Sbjct: 185 FHIGWFLDPITNGRYPSSMLKIVGNRLPGFSADESRMVKGSIDYVGINQYTSYYMKDPGA 364
Query: 172 PPQGPPSYSSDWGVQYYFQRNGVQIGQMAHSIWLYIVPSGMYGVVNYLKEKY 17
Q P SY DW V + ++RNGV IG A+S WLYIVP GM V Y+KE+Y
Sbjct: 365 WNQTPVSYQDDWHVGFVYERNGVPIGPRANSDWLYIVPWGMNKAVTYVKERY 520
Score = 105 bits (225), Expect(2) = 2e-027
Identities = 60/117 (51%), Positives = 71/117 (60%)
Frame = +3 / -3
Query: 183 SAM*YVVY*LIPK*SDEPLTSLACSGVKLGSRSFTMSCIIFGYCPFINGSRNQPIWKSLA 362
S M* VY LIP *S EP T L S +K G+ T+ I G P + GSRN P+WKSLA
Sbjct: 354 SFM**EVYWLIPT*SMEPFTILDSSALKPGNLFPTILSIDDG*RPLVMGSRNHPMWKSLA 175
Query: 363 LCAAF*SSVEFVKGSYQLKSRTIPTLPF*VAWYLLRYLATAVA*DRRML*TTM*GSV 533
LCAA *S++ + GSY KS+ IP LPF Y RY TA A +R +L TM GSV
Sbjct: 174 LCAAA*SALLSL*GSYHTKSKRIPILPFWCG*YFSRYRCTAAACERMILCVTMYGSV 4
Score = 36.3 bits (73), Expect(2) = 2e-027
Identities = 18/32 (56%), Positives = 20/32 (62%)
Frame = +3 / -3
Query: 18 YFSFR*FTTPYMPDGTM*SQIECAICPICTPF 113
Y S * T ++P GTM*SQ E A PI TPF
Sbjct: 519 YLSLT*VTALFIPHGTM*SQSEFARGPIGTPF 424
>gb|AV914116.1|AV914116 AV914116 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags4m17 5', mRNA sequence
Length = 604
Score = 264 bits (570), Expect = 5e-070
Identities = 105/149 (70%), Positives = 119/149 (79%)
Frame = -3 / +2
Query: 463 KYQATQKGKVGIVLDFNWYEPFTNSTEDQKAAQRARDFHIGWFLDPLINGQYPKIMQDIV 284
KYQA QKGKVGIVLDFNWYE TNSTEDQ AAQRARDFH+GWF+DPLING YP+IMQD V
Sbjct: 32 KYQAAQKGKVGIVLDFNWYEALTNSTEDQAAAQRARDFHVGWFVDPLINGHYPQIMQDRV 211
Query: 283 KDRLPSFTPEQAKLVKGSSDYFGINQYTTYYIADQQTPPQGPPSYSSDWGVQYYFQRNGV 104
K+RLP FTP +AK+V GS+DY GINQYT + Q+ Q P SYS+DW V Y F+RNG
Sbjct: 212 KERLPKFTPAEAKMVMGSADYIGINQYTASLMKGQKLLQQTPTSYSADWQVTYAFERNGK 391
Query: 103 QIGQMAHSIWLYIVPSGMYGVVNYLKEKY 17
IG A+S WLYIVPSGMYG V+YL +KY
Sbjct: 392 PIGPKANSNWLYIVPSGMYGCVHYLSQKY 478
Score = 184 bits (396), Expect = 5e-046
Identities = 96/150 (64%), Positives = 103/150 (68%)
Frame = +3 / -2
Query: 18 YFSFR*FTTPYMPDGTM*SQIECAICPICTPFL*K*YWTPQSDE*LGGPCGGVC*SAM*Y 197
YF R* T PY+PDGTM*SQ E A PI PFL K T QS E*L G C M
Sbjct: 477 YFWLR*CTHPYIPDGTM*SQFEFAFGPIGLPFLSKA*VTCQSAE*LVGVCCSNFWPFMRL 298
Query: 198 VVY*LIPK*SDEPLTSLACSGVKLGSRSFTMSCIIFGYCPFINGSRNQPIWKSLALCAAF 377
VY*LIP *S EP+T LA +GV LG+ SFT SCII G CPFI+GS NQP WKSLAL AA
Sbjct: 297 AVY*LIPI*SAEPMTILASAGVNLGNLSFTRSCIICG*CPFISGSTNQPTWKSLAL*AAA 118
Query: 378 *SSVEFVKGSYQLKSRTIPTLPF*VAWYLL 467
SSVE V+ SYQLKSRTIPT PF* A YL+
Sbjct: 117 WSSVELVRASYQLKSRTIPTFPF*AA*YLV 28
Score = 158 bits (340), Expect = 3e-038
Identities = 73/148 (49%), Positives = 92/148 (62%)
Frame = +2 / -1
Query: 17 VLFL*VVHDSIHARWDDVKPN*VRHLSNLHAIPLKVILDAPVGRVARWSLRRSLLICNVV 196
VL VVH IH RWDDV+P +R SN AI LK I + P+G +A L + L +
Sbjct: 478 VLLAEVVHAPIHPRWDDVEPVRIRLWSNRLAISLKGIGNLPIG*IAGRRLLQQFLALHEA 299
Query: 197 CSILIDPEIV**ALD*LGLFRCETW*PVFHNVLHYLWILPIY*WIKKPTNMEVPGPLRCF 376
+LIDP IV A D R E P+FH VLHYLW++P+Y + KP NMEVPG L C
Sbjct: 298 SCVLIDPNIVRGAHDHFSFSRSELGQPLFHTVLHYLWVMPVYQRVDKPANMEVPGSLSCC 119
Query: 377 LIFS*VCKRFIPVEVKNYPDLAFLSCLV 460
L+FS*V K +PVE++NY +L LSCL+
Sbjct: 118 LVFS*VGKSLVPVEIQNYTNLPLLSCLI 35
Score = 129 bits (277), Expect(2) = 2e-030
Identities = 65/148 (43%), Positives = 87/148 (58%)
Frame = -2 / +1
Query: 461 IPGNSERQGRDSS*LQLV*TFYKLN*RSKSSAKGQGLPYWLVS*SINKWAISKDNARHCE 282
+ G+SE +G SS QLV Y+LN*R SS+K QGLP WLV +K A+ DNAR CE
Sbjct: 34 VSGSSEGEGWYSSGFQLVRGSYQLN*RPSSSSKSQGLPCWLVCRPADKRALPTDNARPCE 213
Query: 281 RPATKFHT*TGQASQGLIRLFRDQSIYYILHCRSTNSSAGTTELLVRLGRPILLSKEWRA 102
R + H+ GL L+ DQS++ H ++A +L RL + L ++W+A
Sbjct: 214 REVAQVHSC*S*NGHGLRGLYWDQSVHS*PHEGPEIAAADADQLFSRLAGYLCL*EKWQA 393
Query: 101 NWTDGALNLALHRPIGHVWSRELPKGKV 18
+WT G LALHRPIG VW R LP+ +V
Sbjct: 394 DWTKGEFELALHRPIGDVWVRALPQPEV 477
Score = 112 bits (240), Expect = 2e-024
Identities = 66/147 (44%), Positives = 83/147 (56%)
Frame = -1 / +3
Query: 456 RQLRKARSG*FLTSTGMNLLQTQLKIKKQRKGPGTSILVGFLIH**MGNIQR*CKTL*KT 277
RQLR+ R *F STG LL TQLK K+Q K PGTS+L G ** G R*CKT+*K
Sbjct: 39 RQLRRGRLV*FWISTGTRLLPTQLKTKQQLKEPGTSMLAGLSTR**TGITHR*CKTV*KR 218
Query: 276 GYQVSHLNRPS*SRAHQTISGSINILHTTLQINKLLRRDHRATRPTGASNITFKGMACKL 97
G S L + S A +TI GSI+ + + R A +P G + + MA +L
Sbjct: 219 GCPSSLLLKLKWSWAPRTILGSISTQLAS*RARNCCSRRRPAIQPIGRLPMPLREMASRL 398
Query: 96 DRWRTQFGFTSSHRACMES*TT*RKST 16
D+ R + G TSSHR CM + TT +ST
Sbjct: 399 DQRRIRTGSTSSHRGCMGACTTSARST 479
Score = 22.6 bits (43), Expect(2) = 2e-030
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = -3 / +1
Query: 493 HATAVARYRNKYQATQKGK 437
H AVARYR + + +G+
Sbjct: 1 HGYAVARYRXQVSGSSEGE 57
>gb|AV917009.1|AV917009 AV917009 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags20h02 5', mRNA sequence
Length = 496
Score = 261 bits (565), Expect = 2e-069
Identities = 103/148 (69%), Positives = 114/148 (77%)
Frame = -3 / +1
Query: 694 IXXDYAXXXFKTXXXRVKXWXXLXEPRIVAXXGYDKGLXPPXXCTQCTAXXNSSTEPYIV 515
+ DYA FKT RVK W EPRIVA GYD G PP C++CTA NS+TEPYIV
Sbjct: 52 LFADYADFCFKTFGDRVKHWFTFNEPRIVALLGYDVGSNPPQRCSKCTAGGNSATEPYIV 231
Query: 514 VHNILLSHATAVARYRNKYQATQKGKVGIVLDFNWYEPFTNSTEDQKAAQRARDFHIGWF 335
HN LL+H AVARYR KYQA QKGKVGIVLDFNWYE TNSTEDQ AAQRARDFH+GWF
Sbjct: 232 AHNFLLAHGYAVARYRTKYQAAQKGKVGIVLDFNWYEALTNSTEDQAAAQRARDFHVGWF 411
Query: 334 LDPLINGQYPKIMQDIVKDRLPSFTPEQ 251
+DPLING YP+IMQD+VK+RLP FTP +
Sbjct: 412 VDPLINGHYPQIMQDLVKERLPKFTPAE 495
Score = 192 bits (413), Expect = 2e-048
Identities = 95/144 (65%), Positives = 103/144 (71%)
Frame = +3 / -3
Query: 255 SGVKLGSRSFTMSCIIFGYCPFINGSRNQPIWKSLALCAAF*SSVEFVKGSYQLKSRTIP 434
+GV LG+ SFT SCII G CPFI+GS NQP WKSLAL AA SSVE V+ SYQLKSRTIP
Sbjct: 491 AGVNLGNLSFTRSCIICG*CPFISGSTNQPTWKSLAL*AAAWSSVELVRASYQLKSRTIP 312
Query: 435 TLPF*VAWYLLRYLATAVA*DRRML*TTM*GSVDEFXXAVHCVHXXGGXSPLS*PXNATI 614
T PF* A YL+RYLATA +R L* TM*GSV EF AVH +H GG P S*P +ATI
Sbjct: 311 TFPF*AA*YLVRYLATA*PCAKRKL*ATM*GSVAEFPPAVHLLHL*GGFDPTS*PRSATI 132
Query: 615 LGSXNXXQXLTRXXXVLKXXSA*S 686
LGS N Q TR VLK SA*S
Sbjct: 131 LGSLNVNQCFTRSPKVLKQKSA*S 60
Score = 138 bits (295), Expect = 4e-032
Identities = 69/142 (48%), Positives = 81/142 (57%)
Frame = -2 / +3
Query: 683 LC*XXFQDXXXSSQXLXXIX*AKDSSIXWL**RAXPPXXVHTMHCXXELIDRTLHCCS*H 504
LC* F D S + L I * KDS WL R V MHC EL +RTLHCCS
Sbjct: 63 LC*LLF*DLWRSCKALVYIQ*TKDSCASWLRRRVESSSKVQQMHCRWELSNRTLHCCSQF 242
Query: 503 SPISCYCSCKIPQ*IPGNSERQGRDSS*LQLV*TFYKLN*RSKSSAKGQGLPYWLVS*SI 324
S + CSCKIP + G+SE +G SS QLV Y+LN*R SS+K QGLP WLV
Sbjct: 243 SLSTRLCSCKIPDQVSGSSEGEGWYSSGFQLVRGSYQLN*RPSSSSKSQGLPCWLVCRPA 422
Query: 323 NKWAISKDNARHCERPATKFHT 258
+K A+ DNAR CER + H+
Sbjct: 423 DKRALPTDNARPCEREVAQVHS 488
Score = 126 bits (269), Expect = 2e-028
Identities = 72/137 (52%), Positives = 80/137 (58%)
Frame = -1 / +2
Query: 684 TMLXXVSRXXXXESXTGXXXMSQG**HXLVMIKGXXPLXGAHNALXVXTHRQNLTLLFIT 505
TML V R TG M+QG* LV G L GA NAL V T +QNLTLL
Sbjct: 62 TMLTFVLRPLAIV*STGLHSMNQG*LRFLVTT*GRILLKGAANALPVGTQQQNLTLLLTI 241
Query: 504 FSYLMLLQLQDTAINTRQLRKARSG*FLTSTGMNLLQTQLKIKKQRKGPGTSILVGFLIH 325
FS ++QLQDT + RQLR+ R *F STG LL TQLK K+Q K PGTS+L G
Sbjct: 242 FS*HTVMQLQDTGPSIRQLRRGRLV*FWISTGTRLLPTQLKTKQQLKEPGTSMLAGLSTR 421
Query: 324 **MGNIQR*CKTL*KTG 274
** G R*CKTL*K G
Sbjct: 422 **TGITHR*CKTL*KRG 472
Score = 122 bits (261), Expect = 2e-027
Identities = 63/123 (51%), Positives = 74/123 (60%)
Frame = +1 / -1
Query: 256 QV*NLVAGLSQCLALSLDIAHLLMDQETNQYGSPWPFALLFDLQLSL*KVHTS*SQELSR 435
Q * LSQ LALS+ A L ++T+Q+GSPW F LL LQLS *+ TS*+ EL +
Sbjct: 490 QE*TWATSLSQGLALSVGNARLSAGRQTSQHGSPWLFELLLGLQLSW*EPRTS*NPELYQ 311
Query: 436 PCLSELPGIYCGILQLQ*HEIGECYEQQCKVLSMSSHXQCIVCTXXGGXALYHNQXMLLS 615
P SELP + GILQL + E EQQCKVL +SSH QCI CT L NQ LS
Sbjct: 310 PSPSELPDTWSGILQLHNRVLRENCEQQCKVLLLSSHRQCICCTFEEDSTLRRNQEAQLS 131
Query: 616 LAH 624
L H
Sbjct: 130 LVH 122
Score = 115 bits (246), Expect(2) = 3e-034
Identities = 44/76 (57%), Positives = 55/76 (72%)
Frame = +2 / -2
Query: 257 RCETW*PVFHNVLHYLWILPIY*WIKKPTNMEVPGPLRCFLIFS*VCKRFIPVEVKNYPD 436
R E P+FH VLHYLW++P+Y + KP NMEVPG L C L+FS*V K +PVE++NY +
Sbjct: 489 RSELGQPLFHKVLHYLWVMPVYQRVDKPANMEVPGSLSCCLVFS*VGKSLVPVEIQNYTN 310
Query: 437 LAFLSCLVFIAVSCNC 484
L LSCL+ VSCNC
Sbjct: 309 LPLLSCLILGPVSCNC 262
Score = 49.6 bits (102), Expect(2) = 3e-034
Identities = 23/53 (43%), Positives = 29/53 (54%)
Frame = +2 / -2
Query: 527 FCR*VXTXSALCAPXRGXKPFIITXXCYYPWLX*XXPVLDSXXXXLETXXSIV 685
FC *V T SA AP R +P+++T YPW PVL + L+T SIV
Sbjct: 219 FCC*VPTGSAFAAPLRRIRPYVVTKKRNYPWFIECKPVLYTIAKGLKTKVSIV 61
>gb|BU986567.1|BU986567 HF12E04r HF Hordeum vulgare subsp. vulgare cDNA clone HF12E04
5-PRIME, mRNA sequence
Length = 570
Score = 248 bits (535), Expect = 3e-065
Identities = 100/170 (58%), Positives = 124/170 (72%)
Frame = -3 / +1
Query: 526 PYIVVHNILLSHATAVARYRNKYQATQKGKVGIVLDFNWYEPFTNSTEDQKAAQRARDFH 347
P+I HNI+LSHA AV RYR KYQ QKG++GI+LDF WYEP ++S DQ AAQRARDFH
Sbjct: 1 PHIDTHNIILSHAAAVQRYREKYQPHQKGRIGILLDFVWYEPHSDSNADQAAAQRARDFH 180
Query: 346 IGWFLDPLINGQYPKIMQDIVKDRLPSFTPEQAKLVKGSSDYFGINQYTTYYIADQQTPP 167
IGWFLDP+ NG+YP M IV + LP F+ +++++VKGS DY GINQYT+YY+ D
Sbjct: 181 IGWFLDPITNGRYPSSMLKIVGNWLPGFSADESRMVKGSIDYVGINQYTSYYMKDPGAWN 360
Query: 166 QGPPSYSSDWGVQYYFQRNGVQIGQMAHSIWLYIVPSGMYGVVNYLKEKY 17
Q P SY D V + ++RNGV IG A+S WLYIVP GM V Y+KE+Y
Sbjct: 361 QTPVSYQDDSHVGFVYERNGVPIGPRANSDWLYIVPWGMNKAVTYVKERY 510
Score = 100 bits (214), Expect(2) = 5e-026
Identities = 56/113 (49%), Positives = 69/113 (61%)
Frame = +3 / -2
Query: 183 SAM*YVVY*LIPK*SDEPLTSLACSGVKLGSRSFTMSCIIFGYCPFINGSRNQPIWKSLA 362
S M* VY LIP *S EP T L S +K G++ T+ I G P + GSRN P+WKSLA
Sbjct: 344 SFM**EVYWLIPT*SMEPFTILDSSALKPGNQFPTILSIDDG*RPLVMGSRNHPMWKSLA 165
Query: 363 LCAAF*SSVEFVKGSYQLKSRTIPTLPF*VAWYLLRYLATAVA*DRRML*TTM 521
LCAA *S++ + GSY KS+ IP LPF Y RY TA A +R +L +M
Sbjct: 164 LCAAA*SALLSL*GSYHTKSKRIPILPFWCG*YFSRYRCTAAACERMILCVSM 6
Score = 36.3 bits (73), Expect(2) = 5e-026
Identities = 18/32 (56%), Positives = 20/32 (62%)
Frame = +3 / -2
Query: 18 YFSFR*FTTPYMPDGTM*SQIECAICPICTPF 113
Y S * T ++P GTM*SQ E A PI TPF
Sbjct: 509 YLSLT*VTALFIPHGTM*SQSEFARGPIGTPF 414
>gb|BE196433.2|BE196433 HVSMEh0092E14f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0092E14f, mRNA sequence
Length = 859
Score = 154 bits (330), Expect(2) = 4e-065
Identities = 65/90 (72%), Positives = 72/90 (80%)
Frame = -3 / +3
Query: 337 FLDPLINGQYPKIMQDIVKDRLPSFTPEQAKLVKGSSDYFGINQYTTYYIADQQTPPQGP 158
FL +NGQYPK MQDIVK+RLPSFTPEQ+KLVKGS DY GINQYT Y+ADQ T Q P
Sbjct: 195 FLIHXLNGQYPKTMQDIVKERLPSFTPEQSKLVKGSVDYIGINQYTATYMADQPTLQQPP 374
Query: 157 PSYSSDWGVQYYFQRNGVQIGQMAHSIWLY 68
SYSSDW V+Y FQRNGV IGQ A+SI L+
Sbjct: 375 TSYSSDWHVRYIFQRNGVPIGQKANSIGLH 464
Score = 147 bits (315), Expect(2) = 1e-056
Identities = 58/76 (76%), Positives = 64/76 (84%)
Frame = -3 / +2
Query: 529 EPYIVVHNILLSHATAVARYRNKYQATQKGKVGIVLDFNWYEPFTNSTEDQKAAQRARDF 350
EPY VVHNILL HATAVARYRNKYQA+QKGKVGIVLDFNWY+ T+S D+ AAQRARDF
Sbjct: 2 EPYTVVHNILLCHATAVARYRNKYQASQKGKVGIVLDFNWYDAATDSPADKAAAQRARDF 181
Query: 349 HIGWFLDPLINGQYPK 302
H+GWFLDPL P+
Sbjct: 182 HVGWFLDPLTKWSIPE 229
Score = 116 bits (248), Expect(2) = 4e-053
Identities = 53/70 (75%), Positives = 60/70 (85%)
Frame = +3 / -2
Query: 321 INGSRNQPIWKSLALCAAF*SSVEFVKGSYQLKSRTIPTLPF*VAWYLLRYLATAVA*DR 500
++GSRNQP WKSLAL AA S+ E V SYQLKS+TIPTLPF*+AWYLLRYLATAVA* +
Sbjct: 210 VSGSRNQPTWKSLALWAAALSAGESVAASYQLKSKTIPTLPF*LAWYLLRYLATAVA*HK 31
Query: 501 RML*TTM*GS 530
RML TT+*GS
Sbjct: 30 RMLWTTV*GS 1
Score = 114 bits (243), Expect(2) = 3e-043
Identities = 47/67 (70%), Positives = 55/67 (82%)
Frame = +1 / -3
Query: 325 MDQETNQYGSPWPFALLFDLQLSL*KVHTS*SQELSRPCLSELPGIYCGILQLQ*HEIGE 504
+DQETNQ+GSPWPF LL Q+S *+ HTS*S +LS+ CLS+LPG YCGI QLQ*H+I E
Sbjct: 206 VDQETNQHGSPWPFGLLLCRQVSR*QHHTS*SPKLSQLCLSDLPGTYCGISQLQ*HDIRE 27
Query: 505 CYEQQCK 525
CY QQCK
Sbjct: 26 CYGQQCK 6
Score = 114 bits (243), Expect(2) = 4e-065
Identities = 51/68 (75%), Positives = 59/68 (86%)
Frame = -1 / +3
Query: 528 NLTLLFITFSYLMLLQLQDTAINTRQLRKARSG*FLTSTGMNLLQTQLKIKKQRKGPGTS 349
+LTLL ITFSY+MLLQL+DTAI+TRQ+RKA+ G*F TSTGM LL T L K+Q KGPGTS
Sbjct: 3 SLTLLSITFSYVMLLQLRDTAISTRQVRKAKLG*FWTSTGMMLLPTHLPTKQQPKGPGTS 182
Query: 348 ILVGFLIH 325
+LVGFLIH
Sbjct: 183 MLVGFLIH 206
Score = 111 bits (238), Expect(2) = 4e-053
Identities = 54/81 (66%), Positives = 59/81 (72%)
Frame = +3 / -1
Query: 78 IECAICPICTPFL*K*YWTPQSDE*LGGPCGGVC*SAM*YVVY*LIPK*SDEPLTSLACS 257
IE A CPI TPF * Y T QSDE*L G C V SAM* VY* IP *S EPLT+L CS
Sbjct: 454 IEFAFCPIGTPFR*NIYRTCQSDE*LVGGCWSVGWSAM*VAVY*FIPM*STEPLTNLDCS 275
Query: 258 GVKLGSRSFTMSCIIFGYCPF 320
GVKLG+ SFT+SC++FGY PF
Sbjct: 274 GVKLGNLSFTISCMVFGY*PF 212
Score = 111 bits (236), Expect(2) = 1e-037
Identities = 48/68 (70%), Positives = 52/68 (76%)
Frame = -2 / +1
Query: 530 RTLHCCS*HSPISCYCSCKIPQ*IPGNSERQGRDSS*LQLV*TFYKLN*RSKSSAKGQGL 351
R LHCC *HS +SCYCSC+IPQ*+PG SERQ DS LQLV* Y+L R SS KGQGL
Sbjct: 1 RALHCCP*HSLMSCYCSCEIPQ*VPGKSERQSWDSFGLQLV*CCYRLTCRQSSSPKGQGL 180
Query: 350 PYWLVS*S 327
P WLVS*S
Sbjct: 181 PCWLVS*S 204
Score = 92.7 bits (196), Expect(2) = 1e-056
Identities = 40/83 (48%), Positives = 55/83 (66%)
Frame = -2 / +2
Query: 326 INKWAISKDNARHCERPATKFHT*TGQASQGLIRLFRDQSIYYILHCRSTNSSAGTTELL 147
+ KW+I +D+AR+ +R T FHT*T QGL RL D+S+Y LH R TN+ A T +LL
Sbjct: 206 LTKWSIPEDHARYSKREVT*FHT*TI*VGQGLCRLHWDKSVYSDLHGRPTNAPATTNKLL 385
Query: 146 VRLGRPILLSKEWRANWTDGALN 78
+ L I +S +WR +WT+G LN
Sbjct: 386 I*LACSIYISAKWRTDWTEGELN 454
Score = 91.3 bits (193), Expect(2) = 2e-029
Identities = 38/57 (66%), Positives = 42/57 (73%)
Frame = +2 / -1
Query: 314 PIY*WIKKPTNMEVPGPLRCFLIFS*VCKRFIPVEVKNYPDLAFLSCLVFIAVSCNC 484
P WIKKPTNMEVPGPL C + *V IPVEV+NYP+ AFL+CLV IAVS NC
Sbjct: 217 PFSXWIKKPTNMEVPGPLGCCFVGR*VGSSIIPVEVQNYPNFAFLTCLVLIAVSRNC 47
Score = 80.8 bits (170), Expect(2) = 3e-043
Identities = 43/81 (53%), Positives = 53/81 (65%)
Frame = +2 / -3
Query: 77 N*VRHLSNLHAIPLKVILDAPVGRVARWSLRRSLLICNVVCSILIDPEIV**ALD*LGLF 256
N*VR LSN +AI LK I + PV VA W L L+C+V ILI P ++ ALD L LF
Sbjct: 455 N*VRLLSNRYAISLKYISNMPVR*VACWWLLERWLVCHVGRCILIYPNVIYRALDQLRLF 276
Query: 257 RCETW*PVFHNVLHYLWILPI 319
RCET *P+F+ +LH L +L I
Sbjct: 275 RCETR*PLFYYILHGLRVLTI 213
Score = 65.7 bits (137), Expect(2) = 1e-037
Identities = 39/84 (46%), Positives = 46/84 (54%)
Frame = -1 / +1
Query: 321 *MGNIQR*CKTL*KTGYQVSHLNRPS*SRAHQTISGSINILHTTLQINKLLRRDHRATRP 142
*M N +R CK *K GY VSHLN S SRA G I+I T Q N+ +AT
Sbjct: 211 *MVNTRRPCKI**KRGYLVSHLNNLSWSRAL*ITLG*ISIQRPTWQTNQRSSNHQQATHL 390
Query: 141 TGASNITFKGMACKLDRWRTQFGF 70
TG +I F MA +LDR RTQ +
Sbjct: 391 TGMFDIYFSEMAYRLDRRRTQLAY 462
Score = 57.9 bits (120), Expect(2) = 2e-029
Identities = 38/84 (45%), Positives = 46/84 (54%)
Frame = +1 / -2
Query: 73 AKLSAPSVQFARHSFESNIGRPSRTSSSVVPAEEFVDLQCSM*YID*SRNSLMSP*LAWP 252
++LS+PSVQ RH E I S+ SS +V A V L C Y D S+ +L SP*
Sbjct: 459 SQLSSPSVQSVRHFAEIYIEHASQMSSLLVVAGALVGLPCRSLYTDLSQCNLQSP*PT*I 280
Query: 253 VQV*NLVAGLSQCLALSLDIAHLL 324
VQV*N V L LA S I HL+
Sbjct: 279 VQV*N*VTSLLLYLAWSSGIDHLV 208
>gb|BU997130.1|BU997130 HI07A02r HI Hordeum vulgare subsp. vulgare cDNA clone HI07A02
5-PRIME, mRNA sequence
Length = 632
Score = 245 bits (529), Expect = 2e-064
Identities = 97/139 (69%), Positives = 108/139 (77%)
Frame = -3 / +3
Query: 694 IXXDYAXXXFKTXXXRVKXWXXLXEPRIVAXXGYDKGLXPPXXCTQCTAXXNSSTEPYIV 515
I DYA FKT R+K W EPRIVA G+D G PP CT+C A NS+TEPY V
Sbjct: 216 IFADYAEFCFKTYGDRIKNWFTFNEPRIVAALGFDTGTNPPNRCTKCAAGGNSATEPYTV 395
Query: 514 VHNILLSHATAVARYRNKYQATQKGKVGIVLDFNWYEPFTNSTEDQKAAQRARDFHIGWF 335
VHNILL HATAVARYRNKYQA+QKGKVGIVLDFNWY+ T+S D+ AAQRARDFH+GWF
Sbjct: 396 VHNILLCHATAVARYRNKYQASQKGKVGIVLDFNWYDAATDSPADKAAAQRARDFHVGWF 575
Query: 334 LDPLINGQYPKIMQDIVKD 278
LDPL+NGQYPK MQDIVK+
Sbjct: 576 LDPLLNGQYPKTMQDIVKE 632
Score = 195 bits (420), Expect = 2e-049
Identities = 93/139 (66%), Positives = 103/139 (74%)
Frame = +3 / -2
Query: 279 SFTMSCIIFGYCPFINGSRNQPIWKSLALCAAF*SSVEFVKGSYQLKSRTIPTLPF*VAW 458
SFT+SC++FGY PF +GSRNQP WKSLAL AA S+ E V SYQLKS+TIPTLPF*+AW
Sbjct: 631 SFTISCMVFGY*PFSSGSRNQPTWKSLALWAAALSAGESVAASYQLKSKTIPTLPF*LAW 452
Query: 459 YLLRYLATAVA*DRRML*TTM*GSVDEFXXAVHCVHXXGGXSPLS*PXNATILGSXNXXQ 638
YLLRYLATAVA* +RML TT+*GSV EF A H VH GG P+S P ATILGS N Q
Sbjct: 451 YLLRYLATAVA*HKRMLWTTV*GSVAEFPPAAHLVHLLGGFVPVSKPSAATILGSLNVNQ 272
Query: 639 XLTRXXXVLKXXSA*SXXM 695
L R VLK SA*S M
Sbjct: 271 FLIRSP*VLKQNSA*SANM 215
Score = 175 bits (377), Expect = 2e-043
Identities = 82/139 (58%), Positives = 93/139 (66%)
Frame = -2 / +2
Query: 695 HXX*LC*XXFQDXXXSSQXLXXIX*AKDSSIXWL**RAXPPXXVHTMHCXXELIDRTLHC 516
H LC* FQD S+ L I *AKDSS WL* PP VH M C EL +R LHC
Sbjct: 215 HICRLC*ILFQDLWRSN*ELVHIQ*AKDSSSTWL*YWNEPP*QVHQMRCRWELSNRALHC 394
Query: 515 CS*HSPISCYCSCKIPQ*IPGNSERQGRDSS*LQLV*TFYKLN*RSKSSAKGQGLPYWLV 336
C *HS +SCYCSC+IPQ*+PG SERQ DS LQLV* Y+L R SS KGQGLP WLV
Sbjct: 395 CP*HSLMSCYCSCEIPQ*VPGKSERQSWDSFGLQLV*CCYRLTCRQSSSPKGQGLPCWLV 574
Query: 335 S*SINKWAISKDNARHCER 279
S*S KW+I +D+AR+ +R
Sbjct: 575 S*STTKWSIPEDHARYSKR 631
Score = 172 bits (371), Expect = 1e-042
Identities = 87/139 (62%), Positives = 98/139 (70%)
Frame = -1 / +1
Query: 696 TXXXTMLXXVSRXXXXESXTGXXXMSQG**HXLVMIKGXXPLXGAHNALXVXTHRQNLTL 517
T TML VSR E TG MSQG** L +I PL GA NAL V T +Q+LTL
Sbjct: 214 TYLQTMLNFVSRLMAIELRTGSHSMSQG**QHLALILERTPLTGAPNALPVGTQQQSLTL 393
Query: 516 LFITFSYLMLLQLQDTAINTRQLRKARSG*FLTSTGMNLLQTQLKIKKQRKGPGTSILVG 337
L ITFSY+MLLQL+DTAI+TRQ+RKA+ G*F TSTGM LL T L K+Q KGPGTS+LVG
Sbjct: 394 LSITFSYVMLLQLRDTAISTRQVRKAKLG*FWTSTGMMLLPTHLPTKQQPKGPGTSMLVG 573
Query: 336 FLIH**MGNIQR*CKTL*K 280
FLIH *M N +R CK *K
Sbjct: 574 FLIHY*MVNTRRPCKI**K 630
Score = 171 bits (369), Expect = 3e-042
Identities = 80/135 (59%), Positives = 92/135 (68%)
Frame = +1 / -3
Query: 292 LALSLDIAHLLMDQETNQYGSPWPFALLFDLQLSL*KVHTS*SQELSRPCLSELPGIYCG 471
LA S I HL++DQETNQ+GSPWPF LL Q+S *+ HTS*S +LS+ CLS+LPG YCG
Sbjct: 618 LAWSSGIDHLVVDQETNQHGSPWPFGLLLCRQVSR*QHHTS*SPKLSQLCLSDLPGTYCG 439
Query: 472 ILQLQ*HEIGECYEQQCKVLSMSSHXQCIVCTXXGGXALYHNQXMLLSLAHXXXXSX*LX 651
I QLQ*H+I ECY QQCK L +SSH Q I CT GG Y +Q +LLSLAH S *
Sbjct: 438 ISQLQ*HDIRECYGQQCKALLLSSHRQRIWCTC*GGSFQYQSQVLLLSLAH*M*TSS*FD 259
Query: 652 XXXS*NXXQHSXXXC 696
S*N QHS C
Sbjct: 258 RHKS*NKIQHSLQIC 214
Score = 151 bits (324), Expect = 4e-036
Identities = 72/139 (51%), Positives = 82/139 (58%)
Frame = +2 / -1
Query: 278 VFHNVLHYLWILPIY*WIKKPTNMEVPGPLRCFLIFS*VCKRFIPVEVKNYPDLAFLSCL 457
+F+ +LH L +L I *WIKKPTNMEVPGPL C + *V IPVEV+NYP+ AFL+CL
Sbjct: 632 LFYYILHGLRVLTI**WIKKPTNMEVPGPLGCCFVGR*VGSSIIPVEVQNYPNFAFLTCL 453
Query: 458 VFIAVSCNCXXXXXXXXXXXXXXFCR*VXTXSALCAPXRGXKPFIITXXCYYPWLX*XXP 637
V IAVS NC C *V T SA AP RG + I CYYPWL P
Sbjct: 452 VLIAVSRNCSSMT*ENVMDNSVRLCC*VPTGSAFGAPVRGVRSSIKAKCCYYPWLIECEP 273
Query: 638 VLDSXXXXLETXXSIVXXY 694
VL+S LET SIV Y
Sbjct: 272 VLNSIAISLETKFSIVCKY 216
>gb|BJ462547.1|BJ462547 BJ462547 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags29b06 5', mRNA sequence
Length = 657
Score = 240 bits (519), Expect = 5e-063
Identities = 92/159 (57%), Positives = 120/159 (75%)
Frame = -3 / +1
Query: 493 HATAVARYRNKYQATQKGKVGIVLDFNWYEPFTNSTEDQKAAQRARDFHIGWFLDPLING 314
HA AV RYR KYQ QKG++GI+LDF WYEP +N+ DQ AAQRARDFH+GWFLDP+I+G
Sbjct: 1 HAAAVRRYREKYQPHQKGRIGILLDFVWYEPLSNNNADQAAAQRARDFHLGWFLDPIIHG 180
Query: 313 QYPKIMQDIVKDRLPSFTPEQAKLVKGSSDYFGINQYTTYYIADQQTPPQGPPSYSSDWG 134
+YP M +IVK+RLP F+ +++ ++KGS DY GINQYT++Y+ D T P SY DW
Sbjct: 181 RYPFTMLEIVKERLPRFSADESTMIKGSIDYVGINQYTSFYMKDTGTWNLTPVSYQDDWH 360
Query: 133 VQYYFQRNGVQIGQMAHSIWLYIVPSGMYGVVNYLKEKY 17
V++ ++RNGV IG A+S WLYIVP G+ V Y+KE+Y
Sbjct: 361 VEFIYERNGVPIGAHANSYWLYIVPWGINKAVTYVKERY 477
Score = 100 bits (213), Expect(2) = 1e-024
Identities = 59/120 (49%), Positives = 70/120 (58%)
Frame = +3 / -2
Query: 132 TPQSDE*LGGPCGGVC*SAM*YVVY*LIPK*SDEPLTSLACSGVKLGSRSFTMSCIIFGY 311
T QS *L G V S M* VY LIP *S +P + S +K G+ S T+S I+ G
Sbjct: 362 TCQSSW*LTGVRFQVPVSFM*KEVYWLIPT*SMDPFIIVDSSALKRGNLSLTISSIVNG* 183
Query: 312 CPFINGSRNQPIWKSLALCAAF*SSVEFVKGSYQLKSRTIPTLPF*VAWYLLRYLATAVA 491
P + GSRN P WKSLALCAA *S++ + GSY KS+ IP LPF Y RY TA A
Sbjct: 182 RPCMMGSRNHPRWKSLALCAAA*SALLLLNGSYHTKSKRIPILPFW*G*YFSRYRRTAAA 3
Score = 32.2 bits (64), Expect(2) = 1e-024
Identities = 17/31 (54%), Positives = 18/31 (58%)
Frame = +3 / -2
Query: 18 YFSFR*FTTPYMPDGTM*SQIECAICPICTP 110
Y S * T +P GTM*SQ E A PI TP
Sbjct: 476 YLSLT*VTALLIPHGTM*SQ*EFAWAPIGTP 384
>gb|BU986160.1|BU986160 HF09N16r HF Hordeum vulgare subsp. vulgare cDNA clone HF09N16
5-PRIME, mRNA sequence
Length = 587
Score = 235 bits (507), Expect = 2e-061
Identities = 93/156 (59%), Positives = 115/156 (73%)
Frame = -3 / +1
Query: 484 AVARYRNKYQATQKGKVGIVLDFNWYEPFTNSTEDQKAAQRARDFHIGWFLDPLINGQYP 305
AV RYR KYQ QKG++GI+LDF WYEP ++S DQ AAQRARDFHIGWFLDP+ NG+YP
Sbjct: 1 AVQRYREKYQPHQKGRIGILLDFVWYEPHSDSNADQAAAQRARDFHIGWFLDPITNGRYP 180
Query: 304 KIMQDIVKDRLPSFTPEQAKLVKGSSDYFGINQYTTYYIADQQTPPQGPPSYSSDWGVQY 125
M IV +RLP F+ +++++VKGS DY GINQYT+YY+ D Q P SY DW V +
Sbjct: 181 SSMLKIVGNRLPGFSADESRMVKGSIDYVGINQYTSYYMKDPGAWNQTPVSYQDDWHVGF 360
Query: 124 YFQRNGVQIGQMAHSIWLYIVPSGMYGVVNYLKEKY 17
++RNGV IG A+S WLYIVP GM V Y+KE+Y
Sbjct: 361 VYERNGVPIGPRANSDWLYIVPWGMNKAVTYVKERY 468
Score = 91.8 bits (194), Expect(2) = 3e-023
Identities = 51/100 (51%), Positives = 60/100 (60%)
Frame = +3 / -1
Query: 183 SAM*YVVY*LIPK*SDEPLTSLACSGVKLGSRSFTMSCIIFGYCPFINGSRNQPIWKSLA 362
S M* VY LIP *S EP T L S +K G+ T+ I G P + GSRN P+WKSLA
Sbjct: 302 SFM**EVYWLIPT*SMEPFTILDSSALKPGNLFPTILSIDDG*RPLVMGSRNHPMWKSLA 123
Query: 363 LCAAF*SSVEFVKGSYQLKSRTIPTLPF*VAWYLLRYLAT 482
LCAA *S++ + GSY KS+ IP LPF Y RY T
Sbjct: 122 LCAAA*SALLSL*GSYHTKSKRIPILPFWCG*YFSRYRCT 3
Score = 36.3 bits (73), Expect(2) = 3e-023
Identities = 18/32 (56%), Positives = 20/32 (62%)
Frame = +3 / -1
Query: 18 YFSFR*FTTPYMPDGTM*SQIECAICPICTPF 113
Y S * T ++P GTM*SQ E A PI TPF
Sbjct: 467 YLSLT*VTALFIPHGTM*SQSEFARGPIGTPF 372
>gb|BU988606.1|BU988606 HF18C11r HF Hordeum vulgare subsp. vulgare cDNA clone HF18C11
5-PRIME, mRNA sequence
Length = 636
Score = 234 bits (506), Expect = 3e-061
Identities = 93/133 (69%), Positives = 101/133 (75%)
Frame = -3 / +1
Query: 694 IXXDYAXXXFKTXXXRVKXWXXLXEPRIVAXXGYDKGLXPPXXCTQCTAXXNSSTEPYIV 515
+ DYA FKT RVK W EPRIVA GYD G PP C++CTA NS+TEPYIV
Sbjct: 238 LFADYADFCFKTFGDRVKHWFTFNEPRIVALLGYDVGSNPPQRCSKCTAGGNSATEPYIV 417
Query: 514 VHNILLSHATAVARYRNKYQATQKGKVGIVLDFNWYEPFTNSTEDQKAAQRARDFHIGWF 335
HN LL+H AVARYR KYQA QKGKVGIVLDFNWYE TNSTEDQ AAQRARDFH+GWF
Sbjct: 418 AHNFLLAHGYAVARYRTKYQAAQKGKVGIVLDFNWYEALTNSTEDQAAAQRARDFHVGWF 597
Query: 334 LDPLINGQYPKIM 296
+DPLING YP+IM
Sbjct: 598 VDPLINGHYPQIM 636
Score = 170 bits (366), Expect = 7e-042
Identities = 86/130 (66%), Positives = 92/130 (70%)
Frame = +3 / -2
Query: 297 IIFGYCPFINGSRNQPIWKSLALCAAF*SSVEFVKGSYQLKSRTIPTLPF*VAWYLLRYL 476
II G CPFI+GS NQP WKSLAL AA SSVE V+ SYQLKSRTIPT PF* A YL+RYL
Sbjct: 635 IICG*CPFISGSTNQPTWKSLAL*AAAWSSVELVRASYQLKSRTIPTFPF*AA*YLVRYL 456
Query: 477 ATAVA*DRRML*TTM*GSVDEFXXAVHCVHXXGGXSPLS*PXNATILGSXNXXQXLTRXX 656
ATA +R L* TM*GSV EF AVH +H GG P S*P +ATILGS N Q TR
Sbjct: 455 ATA*PCAKRKL*ATM*GSVAEFPPAVHLLHL*GGFDPTS*PRSATILGSLNVNQCFTRSP 276
Query: 657 XVLKXXSA*S 686
VLK SA*S
Sbjct: 275 KVLKQKSA*S 246
Score = 126 bits (269), Expect = 2e-028
Identities = 64/129 (49%), Positives = 75/129 (58%)
Frame = -2 / +3
Query: 683 LC*XXFQDXXXSSQXLXXIX*AKDSSIXWL**RAXPPXXVHTMHCXXELIDRTLHCCS*H 504
LC* F D S + L I * KDS WL R V MHC EL +RTLHCCS
Sbjct: 249 LC*LLF*DLWRSCKALVYIQ*TKDSCASWLRCRVESSSKVQQMHCRWELSNRTLHCCSQF 428
Query: 503 SPISCYCSCKIPQ*IPGNSERQGRDSS*LQLV*TFYKLN*RSKSSAKGQGLPYWLVS*SI 324
S + CSCKIP + G+SER+G +SS LQLV Y+LN* SS+K QGLP WLV
Sbjct: 429 SLSTRLCSCKIPDQVSGSSEREGWNSSGLQLVRGSYQLN*GPSSSSKSQGLPCWLVCRPA 608
Query: 323 NKWAISKDN 297
+K A+ DN
Sbjct: 609 DKRALPTDN 635
Score = 118 bits (253), Expect = 3e-026
Identities = 58/109 (53%), Positives = 68/109 (62%)
Frame = +1 / -3
Query: 298 LSLDIAHLLMDQETNQYGSPWPFALLFDLQLSL*KVHTS*SQELSRPCLSELPGIYCGIL 477
LS+ A L ++TNQ+GSPW F LL QLS *+ TS*S EL +P LSELP + GIL
Sbjct: 634 LSVGNARLSAGRQTNQHGSPWLFELLLGPQLSW*EPRTS*SPELFQPSLSELPDTWSGIL 455
Query: 478 QLQ*HEIGECYEQQCKVLSMSSHXQCIVCTXXGGXALYHNQXMLLSLAH 624
QL + E EQQCKVL +SSH QCI CT L+ NQ LSL H
Sbjct: 454 QLHNRVLRENCEQQCKVLLLSSHRQCICCTFEEDSTLHRNQEAQLSLVH 308
Score = 116 bits (248), Expect = 1e-025
Identities = 67/129 (51%), Positives = 76/129 (58%)
Frame = -1 / +2
Query: 684 TMLXXVSRXXXXESXTGXXXMSQG**HXLVMIKGXXPLXGAHNALXVXTHRQNLTLLFIT 505
TML V R TG M+QG* LV + G L GA NAL V T +QNLTLL
Sbjct: 248 TMLTFVLRPLAIV*STGLHSMNQG*LRFLVTM*GRILLKGAANALPVGTQQQNLTLLLTI 427
Query: 504 FSYLMLLQLQDTAINTRQLRKARSG*FLTSTGMNLLQTQLKIKKQRKGPGTSILVGFLIH 325
FS ++QLQDT + RQLRK R *F TSTG LL TQL+ K+Q K PGTS+LVG
Sbjct: 428 FS*HTVMQLQDTGPSIRQLRKGRLE*FWTSTGTRLLPTQLRTKQQLKEPGTSMLVGLSTR 607
Query: 324 **MGNIQR* 298
** G R*
Sbjct: 608 **TGITHR* 634
Score = 103 bits (220), Expect(2) = 7e-031
Identities = 39/63 (61%), Positives = 48/63 (76%)
Frame = +2 / -1
Query: 296 HYLWILPIY*WIKKPTNMEVPGPLRCFLIFS*VCKRFIPVEVKNYPDLAFLSCLVFIAVS 475
HYLW++P+Y + KPTNMEVPG L C L+ S*V K +PVEV+NY +L FLSCL+ VS
Sbjct: 636 HYLWVMPVYQRVDKPTNMEVPGSLSCCLVLS*VGKSLVPVEVQNYSNLPFLSCLILGPVS 457
Query: 476 CNC 484
CNC
Sbjct: 456 CNC 448
Score = 50.1 bits (103), Expect(2) = 7e-031
Identities = 24/53 (45%), Positives = 29/53 (54%)
Frame = +2 / -1
Query: 527 FCR*VXTXSALCAPXRGXKPFIITXXCYYPWLX*XXPVLDSXXXXLETXXSIV 685
FC *V T SA AP R +P+I+T YPW PVL + L+T SIV
Sbjct: 405 FCC*VPTGSAFAAPLRRIRPYIVTKKRNYPWFIECKPVLYTIAKGLKTKVSIV 247
>gb|BU976210.1|BU976210 HA03F10r HA Hordeum vulgare subsp. vulgare cDNA clone HA03F10
5-PRIME, mRNA sequence
Length = 571
Score = 231 bits (498), Expect = 4e-060
Identities = 90/152 (59%), Positives = 109/152 (71%)
Frame = -3 / +2
Query: 685 DYAXXXFKTXXXRVKXWXXLXEPRIVAXXGYDKGLXPPXXCTQCTAXXNSSTEPYIVVHN 506
DYA FK RVK W EPR+VA GYD G P C++C A +S TEPYIV HN
Sbjct: 113 DYAEFCFKVFGDRVKNWFTFNEPRVVAALGYDNGFHAPGRCSKCPAGGDSRTEPYIVTHN 292
Query: 505 ILLSHATAVARYRNKYQATQKGKVGIVLDFNWYEPFTNSTEDQKAAQRARDFHIGWFLDP 326
I+LSHA AV RYR KYQ QKG++GI+LDF WYEP ++S DQ AAQRARDFHIGWFLDP
Sbjct: 293 IILSHAAAVQRYREKYQPHQKGRIGILLDFVWYEPHSDSNADQAAAQRARDFHIGWFLDP 472
Query: 325 LINGQYPKIMQDIVKDRLPSFTPEQAKLVKGS 230
+ NG+YP M IV +RLP F+ +++++VKGS
Sbjct: 473 ITNGRYPSSMLKIVGNRLPGFSADESRMVKGS 568
Score = 125 bits (268), Expect = 2e-028
Identities = 72/152 (47%), Positives = 83/152 (54%)
Frame = +3 / -2
Query: 231 EPLTSLACSGVKLGSRSFTMSCIIFGYCPFINGSRNQPIWKSLALCAAF*SSVEFVKGSY 410
EP T L S +K G+ T+ I G P + GSRN P+WKSLALCAA *S++ + GSY
Sbjct: 567 EPFTILDSSALKPGNLFPTILSIDDG*RPLVMGSRNHPMWKSLALCAAA*SALLSL*GSY 388
Query: 411 QLKSRTIPTLPF*VAWYLLRYLATAVA*DRRML*TTM*GSVDEFXXAVHCVHXXGGXSPL 590
KS+ IP LPF Y RY TA A +R +L TM GSV E A H H G PL
Sbjct: 387 HTKSKRIPILPFWCG*YFSRYRCTAAACERMILCVTMYGSVLESPPAGHLEHLPGAWKPL 208
Query: 591 S*PXNATILGSXNXXQXLTRXXXVLKXXSA*S 686
S P AT LGS Q T LK SA*S
Sbjct: 207 SYPRAATTLGSLKVNQFFTLSPNTLKQNSA*S 112
>gb|BE195060.3|BE195060 HVSMEh0088D01f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0088D01f, mRNA sequence
Length = 803
Score = 216 bits (466), Expect = 1e-055
Identities = 85/126 (67%), Positives = 100/126 (79%)
Frame = -3 / +1
Query: 394 NSTEDQKAAQRARDFHIGWFLDPLINGQYPKIMQDIVKDRLPSFTPEQAKLVKGSSDYFG 215
NSTEDQ AAQRARDFH+GWF+DPLING YP+IMQD+VK+RLP FTP +AK+V GS+DY G
Sbjct: 1 NSTEDQAAAQRARDFHVGWFVDPLINGHYPQIMQDLVKERLPKFTPAEAKMVMGSADYIG 180
Query: 214 INQYTTYYIADQQTPPQGPPSYSSDWGVQYYFQRNGVQIGQMAHSIWLYIVPSGMYGVVN 35
INQYT + Q+ Q P SYS+DW V Y F+RNG IG A+S WLYIVPSGMYG V+
Sbjct: 181 INQYTASLMKGQKLLQQTPTSYSADWQVTYAFERNGKPIGPKANSNWLYIVPSGMYGCVH 360
Query: 34 YLKEKY 17
YL +KY
Sbjct: 361 YLSQKY 378
Score = 144 bits (309), Expect = 5e-034
Identities = 78/125 (62%), Positives = 83/125 (66%)
Frame = +3 / -1
Query: 18 YFSFR*FTTPYMPDGTM*SQIECAICPICTPFL*K*YWTPQSDE*LGGPCGGVC*SAM*Y 197
YF R* T PY+PDGTM*SQ E A PI PFL K T QS E*L G C M
Sbjct: 377 YFWLR*CTHPYIPDGTM*SQFEFAFGPIGLPFLSKA*VTCQSAE*LVGVCCSNFWPFMRL 198
Query: 198 VVY*LIPK*SDEPLTSLACSGVKLGSRSFTMSCIIFGYCPFINGSRNQPIWKSLALCAAF 377
VY*LIP *S EP+T LA +GV LG+ SFT SCII G CPFI+GS NQP WKSLAL AA
Sbjct: 197 AVY*LIPI*SAEPMTILASAGVNLGNLSFTRSCIICG*CPFISGSTNQPTWKSLAL*AAA 18
Query: 378 *SSVE 392
SSVE
Sbjct: 17 WSSVE 3
Score = 129 bits (276), Expect = 2e-029
Identities = 62/126 (49%), Positives = 76/126 (60%)
Frame = +2 / -3
Query: 17 VLFL*VVHDSIHARWDDVKPN*VRHLSNLHAIPLKVILDAPVGRVARWSLRRSLLICNVV 196
VL VVH IH RWDDV+P +R SN AI LK I + P+G +A L + L +
Sbjct: 378 VLLAEVVHAPIHPRWDDVEPVRIRLWSNRLAISLKGIGNLPIG*IAGRRLLQQFLALHEA 199
Query: 197 CSILIDPEIV**ALD*LGLFRCETW*PVFHNVLHYLWILPIY*WIKKPTNMEVPGPLRCF 376
+LIDP IV A D R E P+FH VLHYLW++P+Y + KP NMEVPG L C
Sbjct: 198 SCVLIDPNIVRGAHDHFSFSRSELGQPLFHKVLHYLWVMPVYQRVDKPANMEVPGSLSCC 19
Query: 377 LIFS*V 394
L+FS*V
Sbjct: 18 LVFS*V 1
Score = 113 bits (242), Expect = 9e-025
Identities = 55/125 (44%), Positives = 73/125 (58%)
Frame = -2 / +3
Query: 392 LN*RSKSSAKGQGLPYWLVS*SINKWAISKDNARHCERPATKFHT*TGQASQGLIRLFRD 213
LN*R SS+K QGLP WLV +K A+ DNAR CER + H+ GL L+ D
Sbjct: 3 LN*RPSSSSKSQGLPCWLVCRPADKRALPTDNARPCEREVAQVHSC*S*NGHGLRGLYWD 182
Query: 212 QSIYYILHCRSTNSSAGTTELLVRLGRPILLSKEWRANWTDGALNLALHRPIGHVWSREL 33
QS++ H ++A +L RL + L ++W+A+WT G LALHRPIG VW R L
Sbjct: 183 QSVHS*PHEGPEIAAADADQLFSRLAGYLCL*EKWQADWTKGEFELALHRPIGDVWVRAL 362
Query: 32 PKGKV 18
P+ +V
Sbjct: 363 PQPEV 377
>gb|CA026968.1|CA026968 HZ57H22r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ57H22
5-PRIME, mRNA sequence
Length = 491
Score = 205 bits (442), Expect = 2e-052
Identities = 82/119 (68%), Positives = 88/119 (73%)
Frame = -3 / +3
Query: 694 IXXDYAXXXFKTXXXRVKXWXXLXEPRIVAXXGYDKGLXPPXXCTQCTAXXNSSTEPYIV 515
+ DYA FKT RVK W EPRIVA GYD G PP C++CTA NS+TEPYIV
Sbjct: 135 LFADYADFCFKTFGDRVKHWFTFNEPRIVALLGYDVGSNPPQRCSKCTAGGNSATEPYIV 314
Query: 514 VHNILLSHATAVARYRNKYQATQKGKVGIVLDFNWYEPFTNSTEDQKAAQRARDFHIGW 338
HN LL+H AVARYR KYQA QKGKVGIVLDFNWYE TNSTEDQ AAQRARDFH+GW
Sbjct: 315 AHNFLLAHGYAVARYRTKYQAAQKGKVGIVLDFNWYEALTNSTEDQAAAQRARDFHVGW 491
Score = 147 bits (316), Expect = 5e-035
Identities = 76/116 (65%), Positives = 81/116 (69%)
Frame = +3 / -2
Query: 339 QPIWKSLALCAAF*SSVEFVKGSYQLKSRTIPTLPF*VAWYLLRYLATAVA*DRRML*TT 518
QP WKSLAL AA SSVE V+ SYQLKSRTIPT PF* A YL+RYLATA +R L* T
Sbjct: 490 QPTWKSLAL*AAAWSSVELVRASYQLKSRTIPTFPF*AA*YLVRYLATA*PCAKRKL*AT 311
Query: 519 M*GSVDEFXXAVHCVHXXGGXSPLS*PXNATILGSXNXXQXLTRXXXVLKXXSA*S 686
M*GSV EF AVH +H GG P S*P +ATILGS N Q TR VLK SA*S
Sbjct: 310 M*GSVAEFPPAVHLLHL*GGFDPTS*PRSATILGSLNVNQCFTRSPKVLKQKSA*S 143
Score = 118 bits (253), Expect = 3e-026
Identities = 59/115 (51%), Positives = 68/115 (59%)
Frame = -2 / +2
Query: 683 LC*XXFQDXXXSSQXLXXIX*AKDSSIXWL**RAXPPXXVHTMHCXXELIDRTLHCCS*H 504
LC* F D S + L I * KDS WL R V MHC EL +RTLHCCS
Sbjct: 146 LC*LLF*DLWRSCKALVYIQ*TKDSCASWLRCRVESSSKVQQMHCRWELSNRTLHCCSQF 325
Query: 503 SPISCYCSCKIPQ*IPGNSERQGRDSS*LQLV*TFYKLN*RSKSSAKGQGLPYWL 339
S + CSCKIP + G+SER+G +SS LQLV Y+LN* SS+K QGLP WL
Sbjct: 326 SLSTRLCSCKIPDQVSGSSEREGWNSSGLQLVRGSYQLN*GPSSSSKSQGLPCWL 490
Score = 111 bits (236), Expect = 6e-024
Identities = 61/115 (53%), Positives = 70/115 (60%)
Frame = -1 / +1
Query: 684 TMLXXVSRXXXXESXTGXXXMSQG**HXLVMIKGXXPLXGAHNALXVXTHRQNLTLLFIT 505
TML V R TG M+QG* LV + G L GA NAL V T +QNLTLL
Sbjct: 145 TMLTFVLRPLAIV*STGLHSMNQG*LRFLVTM*GRILLKGAANALPVGTQQQNLTLLLTI 324
Query: 504 FSYLMLLQLQDTAINTRQLRKARSG*FLTSTGMNLLQTQLKIKKQRKGPGTSILV 340
FS ++QLQDT + RQLRK R *F TSTG LL TQL+ K+Q K PGTS+LV
Sbjct: 325 FS*HTVMQLQDTGPSIRQLRKGRLE*FWTSTGTRLLPTQLRTKQQLKEPGTSMLV 489
Score = 111 bits (236), Expect = 6e-024
Identities = 53/95 (55%), Positives = 60/95 (63%)
Frame = +1 / -3
Query: 340 NQYGSPWPFALLFDLQLSL*KVHTS*SQELSRPCLSELPGIYCGILQLQ*HEIGECYEQQ 519
NQ+GSPW F LL QLS *+ TS*S EL +P LSELP + GILQL + E EQQ
Sbjct: 489 NQHGSPWLFELLLGPQLSW*EPRTS*SPELFQPSLSELPDTWSGILQLHNRVLRENCEQQ 310
Query: 520 CKVLSMSSHXQCIVCTXXGGXALYHNQXMLLSLAH 624
CKVL +SSH QCI CT L+ NQ LSL H
Sbjct: 309 CKVLLLSSHRQCICCTFEEDSTLHRNQEAQLSLVH 205
Score = 79.9 bits (168), Expect(2) = 8e-024
Identities = 32/49 (65%), Positives = 37/49 (75%)
Frame = +2 / -1
Query: 338 PTNMEVPGPLRCFLIFS*VCKRFIPVEVKNYPDLAFLSCLVFIAVSCNC 484
PTNMEVPG L C L+ S*V K +PVEV+NY +L FLSCL+ VSCNC
Sbjct: 491 PTNMEVPGSLSCCLVLS*VGKSLVPVEVQNYSNLPFLSCLILGPVSCNC 345
Score = 50.1 bits (103), Expect(2) = 8e-024
Identities = 24/53 (45%), Positives = 29/53 (54%)
Frame = +2 / -1
Query: 527 FCR*VXTXSALCAPXRGXKPFIITXXCYYPWLX*XXPVLDSXXXXLETXXSIV 685
FC *V T SA AP R +P+I+T YPW PVL + L+T SIV
Sbjct: 302 FCC*VPTGSAFAAPLRRIRPYIVTKKRNYPWFIECKPVLYTIAKGLKTKVSIV 144
>gb|AV915968.1|AV915968 AV915968 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags16o12 5', mRNA sequence
Length = 494
Score = 196 bits (422), Expect(2) = 3e-052
Identities = 79/103 (76%), Positives = 87/103 (84%)
Frame = -3 / +2
Query: 325 LINGQYPKIMQDIVKDRLPSFTPEQAKLVKGSSDYFGINQYTTYYIADQQTPPQGPPSYS 146
L+NGQYPK MQDIVK+RLPSFTPEQ+KLVKGS DY GINQYT Y+ADQ T Q P SYS
Sbjct: 32 LLNGQYPKTMQDIVKERLPSFTPEQSKLVKGSVDYIGINQYTATYMADQPTLQQPPTSYS 211
Query: 145 SDWGVQYYFQRNGVQIGQMAHSIWLYIVPSGMYGVVNYLKEKY 17
SDW VQY FQRNGV IGQ A+S WLYIVP+GMYG VNY++EKY
Sbjct: 212 SDWHVQYIFQRNGVPIGQKANSNWLYIVPTGMYGCVNYIREKY 340
Score = 144 bits (310), Expect(2) = 1e-035
Identities = 69/101 (68%), Positives = 75/101 (74%)
Frame = +3 / -3
Query: 18 YFSFR*FTTPYMPDGTM*SQIECAICPICTPFL*K*YWTPQSDE*LGGPCGGVC*SAM*Y 197
YFS *FT PYMP GTM*SQ+E A CPI TPF * Y T QSDE*L G C V SAM*
Sbjct: 339 YFSLM*FTHPYMPVGTM*SQLEFAFCPIGTPFR*NIY*TCQSDE*LVGGCWSVGWSAM*V 160
Query: 198 VVY*LIPK*SDEPLTSLACSGVKLGSRSFTMSCIIFGYCPF 320
VY* IP *S EPLT+L CSGVKLG+ SFT+SC++FGY PF
Sbjct: 159 AVY*FIPM*STEPLTNLDCSGVKLGNLSFTISCMVFGY*PF 37
Score = 120 bits (257), Expect(2) = 7e-028
Identities = 53/101 (52%), Positives = 68/101 (67%)
Frame = -2 / +1
Query: 320 KWAISKDNARHCERPATKFHT*TGQASQGLIRLFRDQSIYYILHCRSTNSSAGTTELLVR 141
KW+I +D+AR+ +R T FHT*T QGL RL D+S+Y LH R TN+ A T +LL+
Sbjct: 37 KWSIPEDHARYSKREVT*FHT*TI*VGQGLCRLHWDKSVYSDLHGRPTNAPATTNKLLI* 216
Query: 140 LGRPILLSKEWRANWTDGALNLALHRPIGHVWSRELPKGKV 18
L I +S +WR +WT+G L LALHRP HVW EL KG+V
Sbjct: 217 LACSIYISAKWRTDWTEGELQLALHRPNRHVWMCELHKGEV 339
Score = 110 bits (234), Expect(2) = 5e-025
Identities = 57/101 (56%), Positives = 67/101 (66%)
Frame = +2 / -2
Query: 17 VLFL*VVHDSIHARWDDVKPN*VRHLSNLHAIPLKVILDAPVGRVARWSLRRSLLICNVV 196
VL VVH SIHA WDDVKP VR LSN +AI LK IL+ PV VA W L L+C+V
Sbjct: 340 VLLPYVVHTSIHACWDDVKPIGVRLLSNRYAISLKYILNMPVR*VACWWLLERWLVCHVG 161
Query: 197 CSILIDPEIV**ALD*LGLFRCETW*PVFHNVLHYLWILPI 319
ILI P ++ ALD L LFRCET *P+F+ +LH L +L I
Sbjct: 160 RCILIYPNVIYRALDQLRLFRCETR*PLFYYILHGLRVLTI 38
Score = 29.0 bits (57), Expect(2) = 3e-052
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = -3 / +3
Query: 352 FHIGWFLDP 326
FH+GWFLDP
Sbjct: 6 FHVGWFLDP 32
Score = 24.9 bits (48), Expect(2) = 1e-035
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +3 / -2
Query: 327 GSRNQPIWK 353
GSRNQP WK
Sbjct: 31 GSRNQPTWK 5
Score = 24.0 bits (46), Expect(2) = 5e-025
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +2 / -1
Query: 329 IKKPTNMEV 355
IKKPTNMEV
Sbjct: 29 IKKPTNMEV 3
Score = 23.1 bits (44), Expect(2) = 7e-028
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = -1 / +1
Query: 357 GTSILVGFLI 328
GTS+LVGFLI
Sbjct: 1 GTSMLVGFLI 30
>gb|BM441924.2|BM441924 EBed07_SQ001_O24_R endosperm, 28 DPA, no treatment, cv Optic,
EBed07 Hordeum vulgare subsp. vulgare cDNA clone
EBed07_SQ001_O24 5', mRNA sequence
Length = 387
Score = 198 bits (427), Expect = 3e-050
Identities = 77/129 (59%), Positives = 97/129 (75%)
Frame = -3 / +1
Query: 448 QKGKVGIVLDFNWYEPFTNSTEDQKAAQRARDFHIGWFLDPLINGQYPKIMQDIVKDRLP 269
QKG++GI+LDF WYEP ++S DQ AAQRARDFHIGWFLDP+ NG+YP M IV +RLP
Sbjct: 1 QKGRIGILLDFVWYEPHSDSNADQAAAQRARDFHIGWFLDPITNGRYPSSMLKIVGNRLP 180
Query: 268 SFTPEQAKLVKGSSDYFGINQYTTYYIADQQTPPQGPPSYSSDWGVQYYFQRNGVQIGQM 89
F+ +++++VKGS DY GINQYT+YY+ D Q P SY DW V + ++RNGV IG
Sbjct: 181 GFSADESRMVKGSIDYVGINQYTSYYMKDPGAWNQTPVSYXDDWHVGFVYERNGVPIGPR 360
Query: 88 AHSIWLYIV 62
A+S WLYIV
Sbjct: 361 ANSDWLYIV 387
>gb|BJ462494.1|BJ462494 BJ462494 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags28l23 5', mRNA sequence
Length = 610
Score = 196 bits (422), Expect(2) = 3e-050
Identities = 79/103 (76%), Positives = 87/103 (84%)
Frame = -3 / +1
Query: 325 LINGQYPKIMQDIVKDRLPSFTPEQAKLVKGSSDYFGINQYTTYYIADQQTPPQGPPSYS 146
L+NGQYPK MQDIVK+RLPSFTPEQ+KLVKGS DY GINQYT Y+ADQ T Q P SYS
Sbjct: 31 LLNGQYPKTMQDIVKERLPSFTPEQSKLVKGSVDYIGINQYTATYMADQPTLQQPPTSYS 210
Query: 145 SDWGVQYYFQRNGVQIGQMAHSIWLYIVPSGMYGVVNYLKEKY 17
SDW VQY FQRNGV IGQ A+S WLYIVP+GMYG VNY++EKY
Sbjct: 211 SDWHVQYIFQRNGVPIGQKANSNWLYIVPTGMYGCVNYIREKY 339
Score = 144 bits (310), Expect = 4e-034
Identities = 69/101 (68%), Positives = 75/101 (74%)
Frame = +3 / -3
Query: 18 YFSFR*FTTPYMPDGTM*SQIECAICPICTPFL*K*YWTPQSDE*LGGPCGGVC*SAM*Y 197
YFS *FT PYMP GTM*SQ+E A CPI TPF * Y T QSDE*L G C V SAM*
Sbjct: 338 YFSLM*FTHPYMPVGTM*SQLEFAFCPIGTPFR*NIY*TCQSDE*LVGGCWSVGWSAM*V 159
Query: 198 VVY*LIPK*SDEPLTSLACSGVKLGSRSFTMSCIIFGYCPF 320
VY* IP *S EPLT+L CSGVKLG+ SFT+SC++FGY PF
Sbjct: 158 AVY*FIPM*STEPLTNLDCSGVKLGNLSFTISCMVFGY*PF 36
Score = 120 bits (257), Expect = 7e-027
Identities = 53/101 (52%), Positives = 68/101 (67%)
Frame = -2 / +3
Query: 320 KWAISKDNARHCERPATKFHT*TGQASQGLIRLFRDQSIYYILHCRSTNSSAGTTELLVR 141
KW+I +D+AR+ +R T FHT*T QGL RL D+S+Y LH R TN+ A T +LL+
Sbjct: 36 KWSIPEDHARYSKREVT*FHT*TI*VGQGLCRLHWDKSVYSDLHGRPTNAPATTNKLLI* 215
Query: 140 LGRPILLSKEWRANWTDGALNLALHRPIGHVWSRELPKGKV 18
L I +S +WR +WT+G L LALHRP HVW EL KG+V
Sbjct: 216 LACSIYISAKWRTDWTEGELQLALHRPNRHVWMCELHKGEV 338
Score = 110 bits (234), Expect = 1e-023
Identities = 57/101 (56%), Positives = 67/101 (66%)
Frame = +2 / -2
Query: 17 VLFL*VVHDSIHARWDDVKPN*VRHLSNLHAIPLKVILDAPVGRVARWSLRRSLLICNVV 196
VL VVH SIHA WDDVKP VR LSN +AI LK IL+ PV VA W L L+C+V
Sbjct: 339 VLLPYVVHTSIHACWDDVKPIGVRLLSNRYAISLKYILNMPVR*VACWWLLERWLVCHVG 160
Query: 197 CSILIDPEIV**ALD*LGLFRCETW*PVFHNVLHYLWILPI 319
ILI P ++ ALD L LFRCET *P+F+ +LH L +L I
Sbjct: 159 RCILIYPNVIYRALDQLRLFRCETR*PLFYYILHGLRVLTI 37
Score = 22.6 bits (43), Expect(2) = 3e-050
Identities = 6/7 (85%), Positives = 7/7 (100%)
Frame = -3 / +2
Query: 346 IGWFLDP 326
+GWFLDP
Sbjct: 11 VGWFLDP 31
>gb|CB858437.1|CB858437 HI07A02w HI Hordeum vulgare subsp. vulgare cDNA clone HI07A02
3-PRIME, mRNA sequence
Length = 653
Score = 194 bits (418), Expect = 5e-049
Identities = 78/102 (76%), Positives = 86/102 (84%)
Frame = -3 / -1
Query: 322 INGQYPKIMQDIVKDRLPSFTPEQAKLVKGSSDYFGINQYTTYYIADQQTPPQGPPSYSS 143
+NGQYPK MQDIVK+RLPSFTPEQ+KLVKGS DY GINQYT Y+ADQ T Q P SYSS
Sbjct: 653 LNGQYPKTMQDIVKERLPSFTPEQSKLVKGSVDYIGINQYTATYMADQPTLQQPPTSYSS 474
Query: 142 DWGVQYYFQRNGVQIGQMAHSIWLYIVPSGMYGVVNYLKEKY 17
DW VQY FQRNGV IGQ A+S WLYIVP+GMYG VNY++EKY
Sbjct: 473 DWHVQYIFQRNGVPIGQKANSNWLYIVPTGMYGCVNYIREKY 348
Score = 144 bits (310), Expect = 4e-034
Identities = 69/101 (68%), Positives = 75/101 (74%)
Frame = +3 / +1
Query: 18 YFSFR*FTTPYMPDGTM*SQIECAICPICTPFL*K*YWTPQSDE*LGGPCGGVC*SAM*Y 197
YFS *FT PYMP GTM*SQ+E A CPI TPF * Y T QSDE*L G C V SAM*
Sbjct: 349 YFSLM*FTHPYMPVGTM*SQLEFAFCPIGTPFR*NIY*TCQSDE*LVGGCWSVGWSAM*V 528
Query: 198 VVY*LIPK*SDEPLTSLACSGVKLGSRSFTMSCIIFGYCPF 320
VY* IP *S EPLT+L CSGVKLG+ SFT+SC++FGY PF
Sbjct: 529 AVY*FIPM*STEPLTNLDCSGVKLGNLSFTISCMVFGY*PF 651
Score = 120 bits (257), Expect = 7e-027
Identities = 53/101 (52%), Positives = 68/101 (67%)
Frame = -2 / -3
Query: 320 KWAISKDNARHCERPATKFHT*TGQASQGLIRLFRDQSIYYILHCRSTNSSAGTTELLVR 141
KW+I +D+AR+ +R T FHT*T QGL RL D+S+Y LH R TN+ A T +LL+
Sbjct: 651 KWSIPEDHARYSKREVT*FHT*TI*VGQGLCRLHWDKSVYSDLHGRPTNAPATTNKLLI* 472
Query: 140 LGRPILLSKEWRANWTDGALNLALHRPIGHVWSRELPKGKV 18
L I +S +WR +WT+G L LALHRP HVW EL KG+V
Sbjct: 471 LACSIYISAKWRTDWTEGELQLALHRPNRHVWMCELHKGEV 349
Score = 110 bits (234), Expect = 1e-023
Identities = 57/101 (56%), Positives = 67/101 (66%)
Frame = +2 / +3
Query: 17 VLFL*VVHDSIHARWDDVKPN*VRHLSNLHAIPLKVILDAPVGRVARWSLRRSLLICNVV 196
VL VVH SIHA WDDVKP VR LSN +AI LK IL+ PV VA W L L+C+V
Sbjct: 348 VLLPYVVHTSIHACWDDVKPIGVRLLSNRYAISLKYILNMPVR*VACWWLLERWLVCHVG 527
Query: 197 CSILIDPEIV**ALD*LGLFRCETW*PVFHNVLHYLWILPI 319
ILI P ++ ALD L LFRCET *P+F+ +LH L +L I
Sbjct: 528 RCILIYPNVIYRALDQLRLFRCETR*PLFYYILHGLRVLTI 650
>gb|BG368358.1|BG368358 HVSMEi0017P04f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0017P04f, mRNA sequence
Length = 671
Score = 188 bits (405), Expect(2) = 4e-048
Identities = 73/126 (57%), Positives = 94/126 (74%)
Frame = -3 / +1
Query: 430 IVLDFNWYEPFTNSTEDQKAAQRARDFHIGWFLDPLINGQYPKIMQDIVKDRLPSFTPEQ 251
I+LDF WYEP ++S DQ AAQRARDFHIGWFL+P+ NG+YP M IV +RLP FT ++
Sbjct: 1 ILLDFVWYEPHSDSNADQAAAQRARDFHIGWFLNPITNGRYPSSMLKIVGNRLPGFTADE 180
Query: 250 AKLVKGSSDYFGINQYTTYYIADQQTPPQGPPSYSSDWGVQYYFQRNGVQIGQMAHSIWL 71
+K+VKGS DY GINQYT+YY+ D Q P SY +DW V + +++NGV +G +A+S WL
Sbjct: 181 SKMVKGSIDYVGINQYTSYYMKDPGAWNQTPVSYQNDWQVGFVYEQNGVPMGPLANSDWL 360
Query: 70 YIVPSG 53
YI P G
Sbjct: 361 YIDPGG 378
Score = 23.1 bits (44), Expect(2) = 4e-048
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = -3 / +2
Query: 67 IVPSGMYGVVNYLKEKY 17
+ P GM + Y+KE+Y
Sbjct: 365 LTPGGMNKALTYVKERY 415
>gb|AV932210.1|AV932210 AV932210 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal2l09 5', mRNA sequence
Length = 655
Score = 160 bits (343), Expect(2) = 4e-047
Identities = 61/118 (51%), Positives = 82/118 (69%)
Frame = -3 / +1
Query: 541 NSSTEPYIVVHNILLSHATAVARYRNKYQATQKGKVGIVLDFNWYEPFTNSTEDQKAAQR 362
NS+TEPYIV H++LL+HA+A + Y+ KYQA Q G +G+ L WYEP T + +D AA+R
Sbjct: 214 NSTTEPYIVAHHLLLAHASAASLYKEKYQAKQGGNIGLTLLGWWYEPATQTPDDIAAAER 393
Query: 361 ARDFHIGWFLDPLINGQYPKIMQDIVKDRLPSFTPEQAKLVKGSSDYFGINQYTTYYI 188
DFHIGW++ PL++G YP +M+ V RLPSFT E+ K V GS D+ G N Y Y+
Sbjct: 394 MNDFHIGWYMHPLVHGDYPPVMRKNVGSRLPSFTDEELKTVLGSFDFVGFNHYIAVYV 567
Score = 48.3 bits (99), Expect(2) = 4e-047
Identities = 18/41 (43%), Positives = 22/41 (53%)
Frame = -3 / +1
Query: 682 YAXXXFKTXXXRVKXWXXLXEPRIVAXXGYDKGLXPPXXCT 560
YA FK RVK W + EP I GYD+G+ PP C+
Sbjct: 58 YAEVCFKNFGDRVKYWSTVNEPNIEPIGGYDQGILPPRRCS 180
>gb|BJ547617.1|BJ547617 BJ547617 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal33e03 5', mRNA sequence
Length = 649
Score = 160 bits (343), Expect(2) = 4e-047
Identities = 61/118 (51%), Positives = 82/118 (69%)
Frame = -3 / +3
Query: 541 NSSTEPYIVVHNILLSHATAVARYRNKYQATQKGKVGIVLDFNWYEPFTNSTEDQKAAQR 362
NS+TEPYIV H++LL+HA+A + Y+ KYQA Q G +G+ L WYEP T + +D AA+R
Sbjct: 204 NSTTEPYIVAHHLLLAHASAASLYKEKYQAKQGGNIGLTLLGWWYEPATQTPDDIAAAER 383
Query: 361 ARDFHIGWFLDPLINGQYPKIMQDIVKDRLPSFTPEQAKLVKGSSDYFGINQYTTYYI 188
DFHIGW++ PL++G YP +M+ V RLPSFT E+ K V GS D+ G N Y Y+
Sbjct: 384 MNDFHIGWYMHPLVHGDYPPVMRKNVGSRLPSFTDEELKTVLGSFDFVGFNHYIAVYV 557
Score = 48.3 bits (99), Expect(2) = 4e-047
Identities = 18/41 (43%), Positives = 22/41 (53%)
Frame = -3 / +3
Query: 682 YAXXXFKTXXXRVKXWXXLXEPRIVAXXGYDKGLXPPXXCT 560
YA FK RVK W + EP I GYD+G+ PP C+
Sbjct: 48 YAEVCFKNFGDRVKYWSTVNEPNIEPIGGYDQGILPPRRCS 170
>gb|BJ547606.1|BJ547606 BJ547606 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal32o19 5', mRNA sequence
Length = 642
Score = 160 bits (343), Expect(2) = 4e-047
Identities = 61/118 (51%), Positives = 82/118 (69%)
Frame = -3 / +2
Query: 541 NSSTEPYIVVHNILLSHATAVARYRNKYQATQKGKVGIVLDFNWYEPFTNSTEDQKAAQR 362
NS+TEPYIV H++LL+HA+A + Y+ KYQA Q G +G+ L WYEP T + +D AA+R
Sbjct: 203 NSTTEPYIVAHHLLLAHASAASLYKEKYQAKQGGNIGLTLLGWWYEPATQTPDDIAAAER 382
Query: 361 ARDFHIGWFLDPLINGQYPKIMQDIVKDRLPSFTPEQAKLVKGSSDYFGINQYTTYYI 188
DFHIGW++ PL++G YP +M+ V RLPSFT E+ K V GS D+ G N Y Y+
Sbjct: 383 MNDFHIGWYMHPLVHGDYPPVMRKNVGSRLPSFTDEELKTVLGSFDFVGFNHYIAVYV 556
Score = 48.3 bits (99), Expect(2) = 4e-047
Identities = 18/41 (43%), Positives = 22/41 (53%)
Frame = -3 / +2
Query: 682 YAXXXFKTXXXRVKXWXXLXEPRIVAXXGYDKGLXPPXXCT 560
YA FK RVK W + EP I GYD+G+ PP C+
Sbjct: 47 YAEVCFKNFGDRVKYWSTVNEPNIEPIGGYDQGILPPRRCS 169
>gb|BQ472678.1|BQ472678 HB01N04r BC Hordeum vulgare subsp. vulgare cDNA clone HB01N04
5-PRIME, mRNA sequence
Length = 700
Score = 158 bits (339), Expect(2) = 1e-046
Identities = 61/118 (51%), Positives = 81/118 (68%)
Frame = -3 / +2
Query: 541 NSSTEPYIVVHNILLSHATAVARYRNKYQATQKGKVGIVLDFNWYEPFTNSTEDQKAAQR 362
NS+TEPYIV H++LL+HA+A + Y+ KYQA Q G +G+ L WYEP T + +D AA+R
Sbjct: 305 NSTTEPYIVAHHLLLAHASAASLYKEKYQAKQGGNIGLTLLGWWYEPATQTPDDIAAAER 484
Query: 361 ARDFHIGWFLDPLINGQYPKIMQDIVKDRLPSFTPEQAKLVKGSSDYFGINQYTTYYI 188
DFHIGW++ PL++G YP +M+ V RLPSFT E+ K V GS D G N Y Y+
Sbjct: 485 MNDFHIGWYMHPLVHGDYPPVMRKNVGSRLPSFTDEELKTVLGSFDXVGFNHYIAVYV 658
Score = 48.3 bits (99), Expect(2) = 1e-046
Identities = 18/41 (43%), Positives = 22/41 (53%)
Frame = -3 / +2
Query: 682 YAXXXFKTXXXRVKXWXXLXEPRIVAXXGYDKGLXPPXXCT 560
YA FK RVK W + EP I GYD+G+ PP C+
Sbjct: 149 YAEVCFKNFGDRVKYWSTVNEPNIEPIGGYDQGILPPRRCS 271
>gb|BQ468641.1|BQ468641 HM01N16T HM Hordeum vulgare subsp. vulgare cDNA clone HM01N16
5-PRIME, mRNA sequence
Length = 632
Score = 185 bits (399), Expect = 2e-046
Identities = 73/141 (51%), Positives = 94/141 (66%)
Frame = -3 / +3
Query: 682 YAXXXFKTXXXRVKXWXXLXEPRIVAXXGYDKGLXPPXXCTQCTAXXNSSTEPYIVVHNI 503
+A FKT RVK W + EPR++A GY G P CT C NS+TEPYI H++
Sbjct: 210 FADFCFKTYGDRVKNWFTINEPRMMAWHGYGDGFFAPGRCTGCRFGGNSATEPYIAGHHL 389
Query: 502 LLSHATAVARYRNKYQATQKGKVGIVLDFNWYEPFTNSTEDQKAAQRARDFHIGWFLDPL 323
+L+HA AV YR+KYQ QKG +GI+LDF WYEP T + ED+ AA RAR+F +GW++ PL
Sbjct: 390 ILAHAAAVKVYRDKYQPAQKGTIGILLDFVWYEPLTYTEEDEYAAHRAREFTLGWYMHPL 569
Query: 322 INGQYPKIMQDIVKDRLPSFT 260
G YP+ MQ +V RLP+FT
Sbjct: 570 TFGHYPETMQKLVGTRLPNFT 632
Score = 111 bits (238), Expect = 3e-024
Identities = 65/140 (46%), Positives = 71/140 (50%)
Frame = +3 / -2
Query: 261 VKLGSRSFTMSCIIFGYCPFINGSRNQPIWKSLALCAAF*SSVEFVKGSYQLKSRTIPTL 440
VKLGS T CI+ G P ++G QP SLALCAA+ SS V GSY KSR +P +
Sbjct: 631 VKLGSLVPTSFCIVSG*WPKVSGCMYQPRVNSLALCAAYSSSSV*VSGSYHTKSRRMPMV 452
Query: 441 PF*VAWYLLRYLATAVA*DRRML*TTM*GSVDEFXXAVHCVHXXGGXSPLS*PXNATILG 620
PF WYL RY TA A R M*GSV E VH G P *P A I G
Sbjct: 451 PFWAGWYLSRYTLTAAACARMRWWPAM*GSVAELPPKRQPVHLPGAKKPSP*PCQAIIRG 272
Query: 621 SXNXXQXLTRXXXVLKXXSA 680
S Q TR VLK SA
Sbjct: 271 SLMVNQFFTRSPYVLKQKSA 212
>gb|AV916387.1|AV916387 AV916387 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags17a02 5', mRNA sequence
Length = 630
Score = 184 bits (397), Expect = 4e-046
Identities = 76/112 (67%), Positives = 81/112 (72%)
Frame = -3 / +1
Query: 694 IXXDYAXXXFKTXXXRVKXWXXLXEPRIVAXXGYDKGLXPPXXCTQCTAXXNSSTEPYIV 515
+ DYA FKT RVK W EPRIVA GYD G PP C++CTA NS+TEPYIV
Sbjct: 295 LFADYADFCFKTFGDRVKHWFTFNEPRIVALLGYDVGSNPPQRCSKCTAGGNSATEPYIV 474
Query: 514 VHNILLSHATAVARYRNKYQATQKGKVGIVLDFNWYEPFTNSTEDQKAAQRA 359
HN LL+H AVARYR KYQA QKGKVGIVLDFNWYE TNSTEDQ AAQRA
Sbjct: 475 AHNFLLAHGYAVARYRTKYQAAQKGKVGIVLDFNWYEALTNSTEDQAAAQRA 630
Score = 131 bits (281), Expect = 4e-030
Identities = 70/109 (64%), Positives = 75/109 (68%)
Frame = +3 / -2
Query: 360 ALCAAF*SSVEFVKGSYQLKSRTIPTLPF*VAWYLLRYLATAVA*DRRML*TTM*GSVDE 539
AL AA SSVE V+ SYQLKSRTIPT PF* A YL+RYLATA +R L* TM*GSV E
Sbjct: 629 AL*AAAWSSVELVRASYQLKSRTIPTFPF*AA*YLVRYLATA*PCAKRKL*ATM*GSVAE 450
Query: 540 FXXAVHCVHXXGGXSPLS*PXNATILGSXNXXQXLTRXXXVLKXXSA*S 686
F AVH +H GG P S*P +ATILGS N Q TR VLK SA*S
Sbjct: 449 FPPAVHLLHL*GGFDPTS*PRSATILGSLNVNQCFTRSPKVLKQKSA*S 303
>gb|BQ464194.1|BQ464194 HF01J17T HF Hordeum vulgare subsp. vulgare cDNA clone HF01J17
5-PRIME, mRNA sequence
Length = 700
Score = 155 bits (333), Expect(2) = 6e-046
Identities = 61/118 (51%), Positives = 81/118 (68%)
Frame = -3 / +3
Query: 541 NSSTEPYIVVHNILLSHATAVARYRNKYQATQKGKVGIVLDFNWYEPFTNSTEDQKAAQR 362
NS+TEPYIV H++LL+HA+AV+ Y+ KYQ Q GK+G+ L +W +P T + ED AA R
Sbjct: 303 NSTTEPYIVTHHLLLAHASAVSLYKEKYQDKQGGKIGLTLLGSWNKPATQTPEDIAAAAR 482
Query: 361 ARDFHIGWFLDPLINGQYPKIMQDIVKDRLPSFTPEQAKLVKGSSDYFGINQYTTYYI 188
DFHIGW++ PL++G YP +M+ V RLPSFT E+ K V GS D G N Y Y+
Sbjct: 483 MNDFHIGWYMHPLVHGDYPPVMRKNVGSRLPSFTAEELKRVLGSFDXVGFNHYAASYV 656
Score = 48.7 bits (100), Expect(2) = 6e-046
Identities = 19/41 (46%), Positives = 21/41 (51%)
Frame = -3 / +3
Query: 682 YAXXXFKTXXXRVKXWXXLXEPRIVAXXGYDKGLXPPXXCT 560
YA FK RVK W L EP I GYD+G PP C+
Sbjct: 150 YADVCFKNFGDRVKYWSTLNEPNIEPIGGYDQGFFPPQRCS 272
>gb|BI947961.1|BI947961 HVSMEl0007J23f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0007J23f, mRNA sequence
Length = 841
Score = 155 bits (334), Expect(2) = 1e-045
Identities = 62/118 (52%), Positives = 81/118 (68%)
Frame = -3 / +1
Query: 541 NSSTEPYIVVHNILLSHATAVARYRNKYQATQKGKVGIVLDFNWYEPFTNSTEDQKAAQR 362
NS+TEPYIV H++LL+HA+A + Y+ KYQA Q GK+G+ L W EP T + ED AA R
Sbjct: 268 NSTTEPYIVAHHLLLAHASAASLYKEKYQAMQGGKIGLTLLGWWSEPATQTPEDIAAAAR 447
Query: 361 ARDFHIGWFLDPLINGQYPKIMQDIVKDRLPSFTPEQAKLVKGSSDYFGINQYTTYYI 188
DFHIGW++ PL++G YP +M+ V RLPSFT E+ K V GS D+ G N Y Y+
Sbjct: 448 MNDFHIGWYMHPLVHGDYPPVMRKNVGSRLPSFTAEELKRVLGSFDFVGFNHYGAAYM 621
Score = 47.3 bits (97), Expect(2) = 1e-045
Identities = 19/41 (46%), Positives = 20/41 (48%)
Frame = -3 / +1
Query: 682 YAXXXFKTXXXRVKXWXXLXEPRIVAXXGYDKGLXPPXXCT 560
YA FK RVK W L EP I GYD G PP C+
Sbjct: 115 YADVCFKNFGDRVKYWSTLNEPNIEPIGGYDVGFLPPRRCS 237
>gb|BI952746.1|BI952746 HVSMEm0007J23f Hordeum vulgare green seedling EST library
HVcDNA0014 (Blumeria infected) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEm0007J23f, mRNA sequence
Length = 634
Score = 155 bits (334), Expect(2) = 1e-045
Identities = 62/118 (52%), Positives = 81/118 (68%)
Frame = -3 / +1
Query: 541 NSSTEPYIVVHNILLSHATAVARYRNKYQATQKGKVGIVLDFNWYEPFTNSTEDQKAAQR 362
NS+TEPYIV H++LL+HA+A + Y+ KYQA Q GK+G+ L W EP T + ED AA R
Sbjct: 268 NSTTEPYIVAHHLLLAHASAASLYKEKYQAMQGGKIGLTLLGWWSEPATQTPEDIAAAAR 447
Query: 361 ARDFHIGWFLDPLINGQYPKIMQDIVKDRLPSFTPEQAKLVKGSSDYFGINQYTTYYI 188
DFHIGW++ PL++G YP +M+ V RLPSFT E+ K V GS D+ G N Y Y+
Sbjct: 448 MNDFHIGWYMHPLVHGDYPPVMRKNVGSRLPSFTAEELKRVLGSFDFVGFNHYGAAYM 621
Score = 47.3 bits (97), Expect(2) = 1e-045
Identities = 19/41 (46%), Positives = 20/41 (48%)
Frame = -3 / +1
Query: 682 YAXXXFKTXXXRVKXWXXLXEPRIVAXXGYDKGLXPPXXCT 560
YA FK RVK W L EP I GYD G PP C+
Sbjct: 115 YADVCFKNFGDRVKYWSTLNEPNIEPIGGYDVGFLPPRRCS 237
>gb|CK122337.1|CK122337 BES1824102p02 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010P022 5-PRIME, mRNA sequence
Length = 750
Score = 112 bits (239), Expect(2) = 2e-045
Identities = 45/84 (53%), Positives = 54/84 (64%)
Frame = -3 / +1
Query: 694 IXXDYAXXXFKTXXXRVKXWXXLXEPRIVAXXGYDKGLXPPXXCTQCTAXXNSSTEPYIV 515
+ DYA FKT RVK W EPRIVA GYD G PP C++CTA NS+TEPYIV
Sbjct: 361 LFADYADFCFKTFGDRVKHWFTFNEPRIVALLGYDVGSNPPQRCSKCTAGGNSATEPYIV 540
Query: 514 VHNILLSHATAVARYRNKYQATQK 443
HN LL+H AVARYR++ + +
Sbjct: 541 AHNFLLAHGYAVARYRDQVSGSSE 612
Score = 90.0 bits (190), Expect(2) = 2e-045
Identities = 34/52 (65%), Positives = 39/52 (75%)
Frame = -3 / +2
Query: 463 KYQATQKGKVGIVLDFNWYEPFTNSTEDQKAAQRARDFHIGWFLDPLINGQY 308
KYQA QKGK GIVLDFNWYE TNSTED++ + +GWF+DPLING Y
Sbjct: 593 KYQAAQKGKXGIVLDFNWYEALTNSTEDKQQLKEPGTSMVGWFVDPLINGHY 748
Score = 81.3 bits (171), Expect(2) = 2e-029
Identities = 44/73 (60%), Positives = 47/73 (64%)
Frame = +3 / -2
Query: 468 RYLATAVA*DRRML*TTM*GSVDEFXXAVHCVHXXGGXSPLS*PXNATILGSXNXXQXLT 647
RYLATA +R L* TM*GSV EF AVH +H GG P S*P +ATILGS N Q T
Sbjct: 587 RYLATA*PCAKRKL*ATM*GSVAEFPPAVHLLHL*GGFDPTS*PRSATILGSLNVNQCFT 408
Query: 648 RXXXVLKXXSA*S 686
R VLK SA*S
Sbjct: 407 RSPKVLKQKSA*S 369
Score = 67.5 bits (141), Expect(2) = 2e-029
Identities = 31/54 (57%), Positives = 36/54 (66%)
Frame = +3 / -1
Query: 306 GYCPFINGSRNQPIWKSLALCAAF*SSVEFVKGSYQLKSRTIPTLPF*VAWYLL 467
G CPFI+GS NQP + + SSVE V+ SYQLKSRTIP PF* A YL+
Sbjct: 750 G*CPFISGSTNQPTMEVPGSLSCCLSSVELVRASYQLKSRTIPXFPF*AA*YLV 589
>gb|BJ547686.1|BJ547686 BJ547686 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal34n12 5', mRNA sequence
Length = 647
Score = 160 bits (343), Expect(2) = 2e-045
Identities = 61/118 (51%), Positives = 82/118 (69%)
Frame = -3 / +2
Query: 541 NSSTEPYIVVHNILLSHATAVARYRNKYQATQKGKVGIVLDFNWYEPFTNSTEDQKAAQR 362
NS+TEPYIV H++LL+HA+A + Y+ KYQA Q G +G+ L WYEP T + +D AA+R
Sbjct: 200 NSTTEPYIVAHHLLLAHASAASLYKEKYQAKQGGNIGLTLLGWWYEPATQTPDDIAAAER 379
Query: 361 ARDFHIGWFLDPLINGQYPKIMQDIVKDRLPSFTPEQAKLVKGSSDYFGINQYTTYYI 188
DFHIGW++ PL++G YP +M+ V RLPSFT E+ K V GS D+ G N Y Y+
Sbjct: 380 MNDFHIGWYMHPLVHGDYPPVMRKNVGSRLPSFTDEELKTVLGSFDFVGFNHYIAVYV 553
Score = 42.3 bits (86), Expect(2) = 2e-045
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = -3 / +2
Query: 664 KTXXXRVKXWXXLXEPRIVAXXGYDKGLXPPXXCT 560
K RVK W + EP I GYD+G+ PP C+
Sbjct: 62 KNFGDRVKYWSTVNEPNIEPIGGYDQGILPPRRCS 166
>gb|BJ462621.1|BJ462621 BJ462621 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags29i09 5', mRNA sequence
Length = 608
Score = 180 bits (388), Expect = 6e-045
Identities = 74/110 (67%), Positives = 79/110 (71%)
Frame = -3 / +2
Query: 694 IXXDYAXXXFKTXXXRVKXWXXLXEPRIVAXXGYDKGLXPPXXCTQCTAXXNSSTEPYIV 515
+ DYA FKT RVK W EPRIVA GYD G PP C++CTA NS+TEPYIV
Sbjct: 278 LFADYADFCFKTFGDRVKHWFTFNEPRIVALLGYDVGSNPPQRCSKCTAGGNSATEPYIV 457
Query: 514 VHNILLSHATAVARYRNKYQATQKGKVGIVLDFNWYEPFTNSTEDQKAAQ 365
HN LL+H AVARYR KYQA QKGKVGIVLDFNWYE TNSTEDQ AAQ
Sbjct: 458 AHNFLLAHGYAVARYRTKYQAAQKGKVGIVLDFNWYEALTNSTEDQAAAQ 607
Score = 129 bits (277), Expect = 1e-029
Identities = 68/106 (64%), Positives = 73/106 (68%)
Frame = +3 / -3
Query: 369 AAF*SSVEFVKGSYQLKSRTIPTLPF*VAWYLLRYLATAVA*DRRML*TTM*GSVDEFXX 548
AA SSVE V+ SYQLKSRTIPT PF* A YL+RYLATA +R L* TM*GSV EF
Sbjct: 603 AAAWSSVELVRASYQLKSRTIPTFPF*AA*YLVRYLATA*PCAKRKL*ATM*GSVAEFPP 424
Query: 549 AVHCVHXXGGXSPLS*PXNATILGSXNXXQXLTRXXXVLKXXSA*S 686
AVH +H GG P S*P +ATILGS N Q TR VLK SA*S
Sbjct: 423 AVHLLHL*GGFDPTS*PRSATILGSLNVNQCFTRSPKVLKQKSA*S 286
>gb|BU998469.1|BU998469 HI11C15r HI Hordeum vulgare subsp. vulgare cDNA clone HI11C15
5-PRIME, mRNA sequence
Length = 650
Score = 156 bits (335), Expect(2) = 1e-043
Identities = 56/114 (49%), Positives = 80/114 (70%)
Frame = -3 / +3
Query: 541 NSSTEPYIVVHNILLSHATAVARYRNKYQATQKGKVGIVLDFNWYEPFTNSTEDQKAAQR 362
+S EPY+ HN+++SHA AV Y+ YQATQ G +GIV+ WYEP TNSTED AA+R
Sbjct: 306 DSRREPYVAAHNMIMSHAAAVDNYKRNYQATQGGSIGIVIAMKWYEPLTNSTEDILAARR 485
Query: 361 ARDFHIGWFLDPLINGQYPKIMQDIVKDRLPSFTPEQAKLVKGSSDYFGINQYT 200
A F + WFLDP+ G YP+ M++++ LP+FT E+ +L++ +D+ G+N YT
Sbjct: 486 ALAFEVDWFLDPIFFGDYPREMREMLSSNLPTFTSEEKRLLQSKADFIGVNHYT 647
Score = 40.5 bits (82), Expect(2) = 1e-043
Identities = 18/49 (36%), Positives = 20/49 (40%)
Frame = -3 / +3
Query: 682 YAXXXFKTXXXRVKXWXXLXEPRIVAXXGYDKGLXPPXXCTQCTAXXNS 536
YA FK RVK W L EP + Y G PP C+ NS
Sbjct: 156 YADVCFKAFGDRVKFWTTLNEPNLFTKFAYMLGQYPPKHCSPPFGTCNS 302
>gb|BU984656.1|BU984656 HF04J11r HF Hordeum vulgare subsp. vulgare cDNA clone HF04J11
5-PRIME, mRNA sequence
Length = 634
Score = 147 bits (316), Expect(2) = 1e-043
Identities = 58/109 (53%), Positives = 78/109 (71%)
Frame = -3 / +3
Query: 541 NSSTEPYIVVHNILLSHATAVARYRNKYQATQKGKVGIVLDFNWYEPFTNSTEDQKAAQR 362
NS+TEPYIV H++LL+HA+AV+ Y+ KYQ Q GK+G+ L +W +P T + ED AA R
Sbjct: 306 NSTTEPYIVTHHLLLAHASAVSLYKEKYQDKQGGKIGLTLLGSWNKPATQTPEDIAAAAR 485
Query: 361 ARDFHIGWFLDPLINGQYPKIMQDIVKDRLPSFTPEQAKLVKGSSDYFG 215
DFHIGW++ PL++G YP +M+ V RLPSFT E+ K V GS D+ G
Sbjct: 486 MNDFHIGWYMHPLVHGDYPPVMRKNVGSRLPSFTAEELKRVLGSFDFVG 632
Score = 48.7 bits (100), Expect(2) = 1e-043
Identities = 19/41 (46%), Positives = 21/41 (51%)
Frame = -3 / +3
Query: 682 YAXXXFKTXXXRVKXWXXLXEPRIVAXXGYDKGLXPPXXCT 560
YA FK RVK W L EP I GYD+G PP C+
Sbjct: 153 YADVCFKNFGDRVKYWSTLNEPNIEPIGGYDQGFFPPQRCS 275
>gb|BQ469152.1|BQ469152 HM03J01r HM Hordeum vulgare subsp. vulgare cDNA clone HM03J01
5-PRIME, mRNA sequence
Length = 578
Score = 174 bits (375), Expect = 4e-043
Identities = 69/107 (64%), Positives = 83/107 (77%)
Frame = -3 / +3
Query: 337 FLDPLINGQYPKIMQDIVKDRLPSFTPEQAKLVKGSSDYFGINQYTTYYIADQQTPPQGP 158
F+DPLING YP+IMQD+VK+RLP FTP +AK+VKGS+DY GINQYT + Q+ Q P
Sbjct: 18 FVDPLINGHYPQIMQDLVKERLPKFTPAEAKMVKGSADYIGINQYTASLMKGQKLLQQTP 197
Query: 157 PSYSSDWGVQYYFQRNGVQIGQMAHSIWLYIVPSGMYGVVNYLKEKY 17
SYS+DW V Y F+RNG IG A+S WLYIVPSGMYG V+YL +KY
Sbjct: 198 TSYSADWQVTYAFERNGKPIGPKANSNWLYIVPSGMYGCVHYLSQKY 338
Score = 116 bits (248), Expect = 1e-025
Identities = 64/107 (59%), Positives = 68/107 (63%)
Frame = +3 / -2
Query: 18 YFSFR*FTTPYMPDGTM*SQIECAICPICTPFL*K*YWTPQSDE*LGGPCGGVC*SAM*Y 197
YF R* T PY+PDGTM*SQ E A PI PFL K T QS E*L G C M
Sbjct: 337 YFWLR*CTHPYIPDGTM*SQFEFAFGPIGLPFLSKA*VTCQSAE*LVGVCCSNFWPFMRL 158
Query: 198 VVY*LIPK*SDEPLTSLACSGVKLGSRSFTMSCIIFGYCPFINGSRN 338
VY LIP *S EPLT LA +GV LG+ SFT SCII G CPFI+GS N
Sbjct: 157 AVYWLIPI*SAEPLTILASAGVNLGNLSFTRSCIICG*CPFISGSTN 17
Score = 100 bits (214), Expect = 6e-021
Identities = 48/110 (43%), Positives = 63/110 (57%)
Frame = +2 / -1
Query: 17 VLFL*VVHDSIHARWDDVKPN*VRHLSNLHAIPLKVILDAPVGRVARWSLRRSLLICNVV 196
VL VVH IH RWDDV+P +R N AI LK I + P+G +A L + L +
Sbjct: 338 VLLAEVVHAPIHPRWDDVEPVRIRLWPNRLAISLKGIGNLPIG*IAGRRLLQQFLALHEA 159
Query: 197 CSILIDPEIV**ALD*LGLFRCETW*PVFHNVLHYLWILPIY*WIKKPTN 346
+L+DP IV ALD R E P+FH VLHYLW++P+Y + KP +
Sbjct: 158 SCVLVDPNIVRGALDHFSFSRSELGQPLFHKVLHYLWVMPVYQRVDKPAS 9
>gb|BQ471321.1|BQ471321 HV02B13r HV Hordeum vulgare subsp. vulgare cDNA clone HV02B13
5-PRIME, mRNA sequence
Length = 641
Score = 154 bits (331), Expect(2) = 5e-043
Identities = 60/120 (50%), Positives = 85/120 (70%)
Frame = -3 / +3
Query: 541 NSSTEPYIVVHNILLSHATAVARYRNKYQATQKGKVGIVLDFNWYEPFTNSTEDQKAAQR 362
+S+ EPY V H+ +L+HA+AV YR+KYQATQ G VGI + W PF++S D A QR
Sbjct: 135 DSTVEPYTVAHHSILAHASAVRLYRDKYQATQGGLVGINIYTFWNYPFSHSPADVAATQR 314
Query: 361 ARDFHIGWFLDPLINGQYPKIMQDIVKDRLPSFTPEQAKLVKGSSDYFGINQYTTYYIAD 182
+ DF +GW LDPL+ G YP+IM+ R+PSFT +Q++L++G D+ GIN YT+ Y++D
Sbjct: 315 SLDFMVGWILDPLVKGDYPEIMKKKAGPRIPSFTKQQSELIRGCIDFVGINHYTSVYVSD 494
Score = 40.0 bits (81), Expect(2) = 5e-043
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -3 / +3
Query: 649 RVKXWXXLXEPRIVAXXGYDKGLXPPXXCT 560
RV+ W + EP ++A YD G PP C+
Sbjct: 15 RVRHWTTMDEPNVIAIAAYDSGAFPPCRCS 104
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 300,698,129
Number of Sequences: 312970
Number of extensions: 4514605
Number of successful extensions: 32818
Number of sequences better than 1.0e-020: 144
length of database: 58,378,179
effective HSP length: 51
effective length of database: 42,416,709
effective search space used: 7635007620
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)