TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QAD12g05.sg.3.2
(900 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BF267513.1|BF267513 HV_CEa0018C13f Hordeum vulgare seedl... 373 e-105
gb|BQ740005.1|BQ740005 HC01H01 HC Hordeum vulgare subsp. vu... 371 e-102
gb|BG344503.2|BG344503 HVSMEg0009H09f Hordeum vulgare pre-a... 332 3e-099
gb|AL505184.1|AL505184 AL505184 Hordeum vulgare Barke roots... 339 7e-099
gb|BI947030.1|BI947030 HVSMEl0003F03f Hordeum vulgare spike... 337 3e-095
gb|BU980134.1|BU980134 HA18L12r HA Hordeum vulgare subsp. v... 327 4e-089
gb|BQ469495.1|BQ469495 HM04P17r HM Hordeum vulgare subsp. v... 325 2e-088
gb|BE456033.3|BE456033 HVSMEg0019H01f Hordeum vulgare pre-a... 315 2e-085
gb|BG368403.1|BG368403 HVSMEi0018G12f Hordeum vulgare 20 DA... 311 3e-084
gb|CB882590.1|CB882590 HL02E21w HL Hordeum vulgare subsp. v... 248 3e-082
gb|BI780821.2|BI780821 EBma05_SQ001_A11_R maternal, 12 DPA,... 289 1e-077
gb|BQ468056.1|BQ468056 HR01M23r HR Hordeum vulgare subsp. v... 281 5e-075
gb|CA019925.1|CA019925 HV13L19r HV Hordeum vulgare subsp. v... 274 4e-073
gb|BQ461122.1|BQ461122 HE01C10r HE Hordeum vulgare subsp. v... 270 6e-072
gb|BG368408.1|BG368408 HVSMEi0018I02f Hordeum vulgare 20 DA... 247 1e-070
gb|BQ768106.1|BQ768106 EBro08_SQ010_O18_R root, 3 week, dro... 256 1e-067
gb|BQ659383.1|BQ659383 HE01C10u HE Hordeum vulgare subsp. v... 252 2e-066
gb|AL510966.1|AL510966 AL510966 Hordeum vulgare Barke devel... 226 5e-061
gb|CA029314.1|CA029314 HZ64N12r HZ Hordeum vulgare subsp. v... 230 1e-059
gb|AL502789.1|AL502789 AL502789 Hordeum vulgare Barke roots... 228 3e-059
gb|CA021037.1|CA021037 HZ38O19r HZ Hordeum vulgare subsp. v... 210 7e-054
gb|CA027775.1|CA027775 HZ59P23r HZ Hordeum vulgare subsp. v... 111 2e-047
gb|BQ768059.1|BQ768059 EBro08_SQ010_H13_R root, 3 week, dro... 137 1e-031
gb|BQ767248.1|BQ767248 EBro08_SQ008_J12_R root, 3 week, dro... 125 4e-028
gb|BM444900.1|BM444900 EBem09_SQ006_N12_R embryo, 1 Day ger... 122 3e-027
gb|BQ760373.1|BQ760373 EBro01_SQ002_E24_R root, 3 week, hyd... 104 7e-022
>gb|BF267513.1|BF267513 HV_CEa0018C13f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0018C13f, mRNA sequence
Length = 797
Score = 373 bits (809), Expect(2) = e-105
Identities = 152/204 (74%), Positives = 168/204 (82%)
Frame = +1 / +1
Query: 160 LKLSQVEILVSYLGASVFVFLAVWLVSGRCVRLSKTDRLLMCWWAFTGLTHIMIEGPFVF 339
++++ +EIL YL +FV AVWL+ GRC +LS DRLLMCWW FTGLTHI+IEGPFVF
Sbjct: 142 MQVTHLEILGGYLVTYLFVVAAVWLLCGRCRKLSGADRLLMCWWDFTGLTHILIEGPFVF 321
Query: 340 TPDFFKKENPNFFDEVWKEYSKGDSRYVARDTATVTVEGITAVLEGPASLLAVYAIASRK 519
TP FF K +PNFFDEVWKEYSKGDSRYVARDTATVTVEGITAVLEGPASLLAVYAIASRK
Sbjct: 322 TPGFFTKTSPNFFDEVWKEYSKGDSRYVARDTATVTVEGITAVLEGPASLLAVYAIASRK 501
Query: 520 SFSHILQFAVCLGQLYGCLVYFITAYLDGFNFWVGPFYFWAYFIGANSFWIWIPMLIAIR 699
S+SHILQFAVCLGQLYGC+VYF TAYLDG NFW+ PFYFWAYFIGANS W+ I +LI R
Sbjct: 502 SYSHILQFAVCLGQLYGCIVYFTTAYLDGLNFWISPFYFWAYFIGANSSWVVITLLIPKR 681
Query: 700 SWKKTCAAFQAEKVKKTK*KLSLA 771
SW K C A + KT * L LA
Sbjct: 682 SWNKICTAGYPSEKGKT**LLELA 753
Score = 256 bits (554), Expect = 1e-067
Identities = 127/205 (61%), Positives = 139/205 (67%)
Frame = -2 / -1
Query: 785 SNKTVAKDSFYLVFFTFSA*NAAQVFFQDLMAMSIGIQIQKLFAPMKYAQK*NGPTQKLK 606
S A S Y V * A Q+ FQ L +S I +LFAP+KYAQK*NG QK K
Sbjct: 767 SQTLYASSSNY*VLPFSLG*PAVQILFQLLFGISNVITTHELFAPIKYAQK*NGLIQKFK 588
Query: 605 PSKYAVMK*TRHP*SWPRQTANWRMWLKDFLDAIA*TASSDAGPSNTAVIPSTVTVAVSL 426
PSK AV+K*T HP*S PR TAN R+WL D DAIA*TASS+AGPS+TAVIPSTVTVAVSL
Sbjct: 587 PSK*AVVK*TMHP*S*PRHTANCRIWLYDLRDAIA*TASSEAGPSSTAVIPSTVTVAVSL 408
Query: 425 ATYLESPLLYSFQTXXXXXXXXXXXXXGVKTKGPSIIMWVNPVNAHQHMSRRSVLDNLTH 246
ATYLESPLLYSFQT GVKTKGPS+ MWV PV +HQHMSRRS D+L H
Sbjct: 407 ATYLESPLLYSFQTSSKKLGLVLVKKPGVKTKGPSMSMWVRPVKSHQHMSRRSAPDSLRH 228
Query: 245 LPETSQTARKTKTEAPR*DTRISTW 171
LP+ SQTA TK R RIS W
Sbjct: 227 LPQRSQTAATTKR*VTRYPPRISRW 153
Score = 169 bits (363), Expect = 2e-041
Identities = 75/155 (48%), Positives = 101/155 (65%)
Frame = -1 / -3
Query: 723 RGASFLPGPYGDEHRYPDPEAVCANEIRPEVERADPEVEAVQVRGDEVNQASVELAQTDG 544
R A +P P D+ R +P VCA++I PEVER DPEV AVQV G +V+ ASVEL Q
Sbjct: 705 RRADLVPAPLRDQQRNHNPRTVCADKICPEVERTDPEV*AVQVGGGKVDDASVELTQAHR 526
Query: 543 ELENVAEGLPGCNSVDSK**CRAFQYSGDPFDRNSCSVPSNIPRVSLTILFPNFIKEIGV 364
EL ++A L C+ +D + RAFQ+ D FD + VP ++P V+L +L P+F++E+G
Sbjct: 525 EL*DMAVRLARCDRIDREQRGRAFQHGRDSFDGDGGGVPGDVPGVTLAVLLPDFVEEVGA 346
Query: 363 LLLEEIRSEDKGPLDHYVGQPCKCPPAHEQTVGLG 259
L EE +D+GPLD YVG+ + PPAHEQ VG G
Sbjct: 345 GLGEETGGKDEGPLDEYVGEAGEVPPAHEQAVGPG 241
Score = 29.9 bits (59), Expect(2) = e-105
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +1 / +3
Query: 115 HPYAPAELDLPGFVP 159
HPY P LDL G+VP
Sbjct: 96 HPYVPPSLDLLGYVP 140
>gb|BQ740005.1|BQ740005 HC01H01 HC Hordeum vulgare subsp. vulgare cDNA clone HC01H01
similar to Probable
3-beta-hydroxysteroid-delta(8),delta(7)-isomerase
(Cholestenol delta-isomerase) (Delta8-delta7 sterol
isomerase) (D8-D7 sterol isomerase)
gi|10697192|dbj|BAB16323...., mRNA sequence
Length = 614
Score = 371 bits (804), Expect = e-102
Identities = 146/172 (84%), Positives = 158/172 (91%)
Frame = +1 / +3
Query: 115 HPYAPAELDLPGFVPLKLSQVEILVSYLGASVFVFLAVWLVSGRCVRLSKTDRLLMCWWA 294
HPY PA LDLPG+VPL+L+Q+EIL +YLG S+FV AVWL+SGRC RLS DRLLMCWWA
Sbjct: 99 HPYVPASLDLPGYVPLRLTQLEILAAYLGTSLFVVAAVWLLSGRCRRLSGADRLLMCWWA 278
Query: 295 FTGLTHIMIEGPFVFTPDFFKKENPNFFDEVWKEYSKGDSRYVARDTATVTVEGITAVLE 474
FTGLTHI+IEGPFVFTP FF K +PNFFDEVWKEYSKGDSRYVARDTATVTVEGITAVLE
Sbjct: 279 FTGLTHILIEGPFVFTPGFFTKTSPNFFDEVWKEYSKGDSRYVARDTATVTVEGITAVLE 458
Query: 475 GPASLLAVYAIASRKSFSHILQFAVCLGQLYGCLVYFITAYLDGFNFWVGPF 630
GPASLLAVYAIASRKS+SHILQFAVCLGQLYGC+VYF TAYLDGFNFW+ PF
Sbjct: 459 GPASLLAVYAIASRKSYSHILQFAVCLGQLYGCIVYFTTAYLDGFNFWISPF 614
Score = 265 bits (574), Expect = 2e-070
Identities = 123/172 (71%), Positives = 130/172 (75%)
Frame = -2 / -2
Query: 629 NGPTQKLKPSKYAVMK*TRHP*SWPRQTANWRMWLKDFLDAIA*TASSDAGPSNTAVIPS 450
NG QKLKPSK AV+K*T HP*S PR TANWR+WL D DAIA*TASS+AGPS+TAVIPS
Sbjct: 613 NGLIQKLKPSK*AVVK*TMHP*S*PRHTANWRIWLYDLRDAIA*TASSEAGPSSTAVIPS 434
Query: 449 TVTVAVSLATYLESPLLYSFQTXXXXXXXXXXXXXGVKTKGPSIIMWVNPVNAHQHMSRR 270
TVTVAVSLATYLESPLLYSFQT GVKTKGPS+ MWV PV AHQHMSRR
Sbjct: 433 TVTVAVSLATYLESPLLYSFQTSSKKLGLVLVKKPGVKTKGPSMSMWVRPVKAHQHMSRR 254
Query: 269 SVLDNLTHLPETSQTARKTKTEAPR*DTRISTWDSFSGTKPGRSSSAGA*GC 114
S D+L HLPE SQTA TK E PR RIS+W S SGT PGRS AG *GC
Sbjct: 253 SAPDSLRHLPERSQTAATTKREVPRYAARISSWVSRSGT*PGRSRLAGT*GC 98
Score = 145 bits (311), Expect(2) = 2e-036
Identities = 64/124 (51%), Positives = 84/124 (67%)
Frame = -1 / -1
Query: 630 ERADPEVEAVQVRGDEVNQASVELAQTDGELENVAEGLPGCNSVDSK**CRAFQYSGDPF 451
ER DPEVEAVQV G EV+ ASVEL Q ELE++A L C+ +D + RAFQ+ D F
Sbjct: 614 ERTDPEVEAVQVGGGEVDDASVELTQAHRELEDMAVRLARCDRIDREQRGRAFQHGRDSF 435
Query: 450 DRNSCSVPSNIPRVSLTILFPNFIKEIGVLLLEEIRSEDKGPLDHYVGQPCKCPPAHEQT 271
D + VP ++P V+L +L P+F++E+G L EE +D+GPLD YVG+ + PPAHEQ
Sbjct: 434 DGDGGGVPGDVPGVTLAVLLPDFVEEVGAGLGEETGGKDEGPLDEYVGEAGEGPPAHEQA 255
Query: 270 VGLG 259
VG G
Sbjct: 254 VGPG 243
Score = 98.2 bits (208), Expect(2) = 7e-023
Identities = 51/110 (46%), Positives = 67/110 (60%)
Frame = +3 / +2
Query: 243 KMCQIIQDRPSAHVLVGIYRVDPHNDRGALCLHS*FLQEGEPQFL**SLERV**GRL*VC 422
+M Q ++ RP AHVLVG++R PH RGAL L+ FL + +PQ L SLE V G L V
Sbjct: 227 EMPQAVRGRPPAHVLVGLHRPHPHTHRGALRLYPRFLHQDQPQLLRRSLEGVQQG*LQVR 406
Query: 423 C*GHCNCYGRRDHRCIGRPCITTCCLRYCIQEVLQPHSPVRRLSGPALRM 572
GH + + RR+H GRPC+ L I +V+QP+ PVR + G LRM
Sbjct: 407 RQGHRHRHRRRNHGRAGRPCLAARGLCDRIAQVVQPYPPVRGVPGSTLRM 556
Score = 29.0 bits (57), Expect(2) = 7e-023
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = +3 / +2
Query: 114 APLRASRAGPSGFRAAEA 167
APLRA GP G RAA A
Sbjct: 98 APLRAGEPGPPGLRAAAA 151
Score = 27.6 bits (54), Expect(2) = 2e-036
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = -3 / -3
Query: 166 ASAARNPEGPARLARKGA 113
A+AAR+P GP AR+GA
Sbjct: 150 AAAARSPGGPGSPARRGA 97
>gb|BG344503.2|BG344503 HVSMEg0009H09f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0009H09f, mRNA sequence
Length = 810
Score = 332 bits (720), Expect(3) = 3e-099
Identities = 133/157 (84%), Positives = 144/157 (91%)
Frame = +1 / +3
Query: 115 HPYAPAELDLPGFVPLKLSQVEILVSYLGASVFVFLAVWLVSGRCVRLSKTDRLLMCWWA 294
HPY PA LDLPG+VPL+L+Q+EIL +YLG S+FV AVWL+SGRC RLS DRLLMCWWA
Sbjct: 96 HPYVPASLDLPGYVPLRLTQLEILAAYLGTSLFVVAAVWLLSGRCRRLSGADRLLMCWWA 275
Query: 295 FTGLTHIMIEGPFVFTPDFFKKENPNFFDEVWKEYSKGDSRYVARDTATVTVEGITAVLE 474
FTGLTHI+IEGPFVFTP FF K +PNFFDEVWKEYSKGDSRYVARDTATVTVE ITAVLE
Sbjct: 276 FTGLTHILIEGPFVFTPGFFTKTSPNFFDEVWKEYSKGDSRYVARDTATVTVERITAVLE 455
Query: 475 GPASLLAVYAIASRKSFSHILQFAVCLGQLYGCLVYF 585
GPASLLAVYAIASRKS+SHILQFAVCLGQLYGC+VYF
Sbjct: 456 GPASLLAVYAIASRKSYSHILQFAVCLGQLYGCIVYF 566
Score = 239 bits (517), Expect(2) = 8e-065
Identities = 111/158 (70%), Positives = 118/158 (74%)
Frame = -2 / -3
Query: 587 MK*TRHP*SWPRQTANWRMWLKDFLDAIA*TASSDAGPSNTAVIPSTVTVAVSLATYLES 408
+K*T HP*S PR TANWR+WL D DAIA*TASS+AGPS+TAVI STVTVAVSLATYLES
Sbjct: 568 VK*TMHP*S*PRHTANWRIWLYDLRDAIA*TASSEAGPSSTAVILSTVTVAVSLATYLES 389
Query: 407 PLLYSFQTXXXXXXXXXXXXXGVKTKGPSIIMWVNPVNAHQHMSRRSVLDNLTHLPETSQ 228
PLLYSFQT GVKTKGPS+ MWV PV AHQHMSRRS D+L HLPE SQ
Sbjct: 388 PLLYSFQTSSKKLGLVLVKKPGVKTKGPSMSMWVRPVKAHQHMSRRSAPDSLRHLPERSQ 209
Query: 227 TARKTKTEAPR*DTRISTWDSFSGTKPGRSSSAGA*GC 114
TA TK E PR RIS+W S SGT PGRS AG *GC
Sbjct: 208 TAATTKREVPRYAARISSWVSRSGT*PGRSRLAGT*GC 95
Score = 119 bits (254), Expect(3) = 2e-031
Identities = 52/109 (47%), Positives = 72/109 (66%)
Frame = -1 / -2
Query: 585 EVNQASVELAQTDGELENVAEGLPGCNSVDSK**CRAFQYSGDPFDRNSCSVPSNIPRVS 406
EV+ ASVEL Q ELE++A L C+ +D + RAFQ+ D FD + VP ++P V+
Sbjct: 566 EVDDASVELTQAHRELEDMAVRLARCDRIDREQRGRAFQHGRDSFDGDGGGVPGDVPGVT 387
Query: 405 LTILFPNFIKEIGVLLLEEIRSEDKGPLDHYVGQPCKCPPAHEQTVGLG 259
L +L P+F++E+G L EE +D+GPLD YVG+ + PPAHEQ VG G
Sbjct: 386 LAVLLPDFVEEVGAGLGEETGGKDEGPLDEYVGEAGEGPPAHEQAVGPG 240
Score = 96.4 bits (204), Expect(2) = 3e-022
Identities = 49/110 (44%), Positives = 67/110 (60%)
Frame = +3 / +2
Query: 243 KMCQIIQDRPSAHVLVGIYRVDPHNDRGALCLHS*FLQEGEPQFL**SLERV**GRL*VC 422
+M Q ++ RP AHVLVG++R PH RGAL L+ FL + +PQ L SLE V G L V
Sbjct: 224 EMPQAVRGRPPAHVLVGLHRPHPHTHRGALRLYPRFLHQDQPQLLRRSLEGVQQG*LQVR 403
Query: 423 C*GHCNCYGRRDHRCIGRPCITTCCLRYCIQEVLQPHSPVRRLSGPALRM 572
GH + + R++H GRPC+ L I +V+QP+ P+R + G LRM
Sbjct: 404 RQGHRHRHRRKNHGRAGRPCLAARGLCDRIAQVVQPYPPIRGVPGSTLRM 553
Score = 43.7 bits (89), Expect(3) = 3e-099
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = +1 / +2
Query: 589 TAYLDGFNFWVGPFYFWAY 645
TAYLDG +FW+ P YFWA+
Sbjct: 569 TAYLDGLHFWISPCYFWAF 625
Score = 29.0 bits (57), Expect(2) = 3e-022
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = +3 / +2
Query: 114 APLRASRAGPSGFRAAEA 167
APLRA GP G RAA A
Sbjct: 95 APLRAGEPGPPGLRAAAA 148
Score = 28.1 bits (55), Expect(2) = 8e-065
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = -1 / -3
Query: 639 PEVERADPEVEAVQVRG 589
P+V R DPEV AVQV G
Sbjct: 619 PKVARTDPEV*AVQVGG 569
Score = 27.6 bits (54), Expect(3) = 2e-031
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = -3 / -1
Query: 166 ASAARNPEGPARLARKGA 113
A+AAR+P GP AR+GA
Sbjct: 147 AAAARSPGGPGSPARRGA 94
Score = 26.7 bits (52), Expect(3) = 2e-031
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = -2 / -1
Query: 641 AQK*NGPTQKLKPSKYAV 588
AQK*+G QK KPSK AV
Sbjct: 621 AQK*HGLIQKCKPSK*AV 568
Score = 25.8 bits (50), Expect(3) = 3e-099
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +1 / +1
Query: 643 YFIGANSFWIWIPMLIAIRSWKKTCAAFQAEKVK 744
+FIGAN + + IP LI + K++ KV+
Sbjct: 622 FFIGANGWGVGIPCLIGRGAGKESHGGSPKGKVR 723
>gb|AL505184.1|AL505184 AL505184 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW07K12V 5', mRNA sequence
Length = 700
Score = 339 bits (735), Expect(2) = 7e-099
Identities = 136/162 (83%), Positives = 147/162 (90%)
Frame = +1 / +2
Query: 115 HPYAPAELDLPGFVPLKLSQVEILVSYLGASVFVFLAVWLVSGRCVRLSKTDRLLMCWWA 294
HPY PA LDLPG+VPL+L+Q+EIL +YLG S+ V AVWL+SGRC RLS DRLLMCWWA
Sbjct: 92 HPYVPASLDLPGYVPLRLTQLEILAAYLGTSLLVXAAVWLLSGRCRRLSGADRLLMCWWA 271
Query: 295 FTGLTHIMIEGPFVFTPDFFKKENPNFFDEVWKEYSKGDSRYVARDTATVTVEGITAVLE 474
FTGLTHI+IEGPFVFTP FF K +PNFFDEVWKEYSKGDSRYVARDTATVTVEGITAVLE
Sbjct: 272 FTGLTHILIEGPFVFTPGFFTKTSPNFFDEVWKEYSKGDSRYVARDTATVTVEGITAVLE 451
Query: 475 GPASLLAVYAIASRKSFSHILQFAVCLGQLYGCLVYFITAYL 600
GPASLLAVYAIAS KS+SHILQFAVCLGQLYGC+VYF TAYL
Sbjct: 452 GPASLLAVYAIASXKSYSHILQFAVCLGQLYGCIVYFTTAYL 577
Score = 247 bits (534), Expect(2) = 1e-067
Identities = 115/162 (70%), Positives = 123/162 (75%)
Frame = -2 / -2
Query: 599 KYAVMK*TRHP*SWPRQTANWRMWLKDFLDAIA*TASSDAGPSNTAVIPSTVTVAVSLAT 420
K AV+K*T HP*S PR TANWR+WL D DAIA*TASS+AGPS+TAVIPSTVTVAVSLAT
Sbjct: 576 K*AVVK*TMHP*S*PRHTANWRIWLYDLXDAIA*TASSEAGPSSTAVIPSTVTVAVSLAT 397
Query: 419 YLESPLLYSFQTXXXXXXXXXXXXXGVKTKGPSIIMWVNPVNAHQHMSRRSVLDNLTHLP 240
YLESPLLYSFQT GVKTKGPS+ MWV PV AHQHMSRRS D+L HLP
Sbjct: 396 YLESPLLYSFQTSSKKLGLVLVKXPGVKTKGPSMSMWVRPVKAHQHMSRRSAPDSLRHLP 217
Query: 239 ETSQTARKTKTEAPR*DTRISTWDSFSGTKPGRSSSAGA*GC 114
E SQTA T+ E PR RIS+W S SGT PGRS AG *GC
Sbjct: 216 ERSQTAAXTRREVPRYAARISSWVSRSGT*PGRSRLAGT*GC 91
Score = 125 bits (267), Expect(3) = 3e-032
Identities = 55/119 (46%), Positives = 78/119 (65%)
Frame = -1 / -1
Query: 615 EVEAVQVRGDEVNQASVELAQTDGELENVAEGLPGCNSVDSK**CRAFQYSGDPFDRNSC 436
+++ QV G EV+ ASVEL Q ELE++A L C+ +D + RAFQ+ D FD +
Sbjct: 592 KLKPXQVGGGEVDDASVELTQAHRELEDMAVRLARCDRIDREQRGRAFQHGRDSFDGDGG 413
Query: 435 SVPSNIPRVSLTILFPNFIKEIGVLLLEEIRSEDKGPLDHYVGQPCKCPPAHEQTVGLG 259
VP ++P V+L +L P+F++E+G L EE +D+GPLD YVG+ + PPAHEQ VG G
Sbjct: 412 GVPGDVPGVTLAVLLPDFVEEVGAGLGEEXGGKDEGPLDEYVGEAGEGPPAHEQAVGPG 236
Score = 96.8 bits (205), Expect(2) = 2e-021
Identities = 51/110 (46%), Positives = 67/110 (60%)
Frame = +3 / +1
Query: 243 KMCQIIQDRPSAHVLVGIYRVDPHNDRGALCLHS*FLQEGEPQFL**SLERV**GRL*VC 422
+M Q ++ RP AHVLVG++R PH RGAL L+ L + +PQ L SLE V G L V
Sbjct: 220 EMPQAVRGRPPAHVLVGLHRPHPHTHRGALRLYPRXLHQDQPQLLRRSLEGVQQG*LQVR 399
Query: 423 C*GHCNCYGRRDHRCIGRPCITTCCLRYCIQEVLQPHSPVRRLSGPALRM 572
GH + + RR+H GRPC+ L I +V+QP+ PVR + G ALRM
Sbjct: 400 RQGHRHRHRRRNHGRAGRPCLAARGLCDRIXQVVQPYPPVRGVPGSALRM 549
Score = 41.8 bits (85), Expect(2) = 7e-099
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = +1 / +3
Query: 604 GFNFWVGPFYFWAYF 648
GFN W+ PFYFWAYF
Sbjct: 582 GFNXWISPFYFWAYF 626
Score = 29.9 bits (59), Expect(2) = 1e-067
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = -1 / -3
Query: 648 EIRPEVERADPEVEAVQVR 592
+I PEVER DP VEAV R
Sbjct: 626 KICPEVERTDPXVEAVPSR 570
Score = 28.1 bits (55), Expect(3) = 3e-032
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = -2 / -1
Query: 647 KYAQK*NGPTQKLKP 603
KYAQK*NG KLKP
Sbjct: 625 KYAQK*NGLIXKLKP 581
Score = 25.4 bits (49), Expect(2) = 2e-021
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +3 / +1
Query: 114 APLRASRAGPSGFRAAEA 167
APLRA P G RAA A
Sbjct: 91 APLRAGEPRPPGLRAAAA 144
Score = 23.5 bits (45), Expect(3) = 3e-032
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -3 / -3
Query: 166 ASAARNPEGPARLARKGA 113
A+AAR+P G AR+GA
Sbjct: 143 AAAARSPGGRGSPARRGA 90
>gb|BI947030.1|BI947030 HVSMEl0003F03f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0003F03f, mRNA sequence
Length = 1022
Score = 337 bits (730), Expect(2) = 3e-095
Identities = 136/171 (79%), Positives = 149/171 (87%)
Frame = +1 / +1
Query: 115 HPYAPAELDLPGFVPLKLSQVEILVSYLGASVFVFLAVWLVSGRCVRLSKTDRLLMCWWA 294
HPY PA LDLPG+VPL+L+Q+EIL +YLG S+FV AVWL+SGRC RLS DRLLMCWWA
Sbjct: 97 HPYVPASLDLPGYVPLRLTQLEILAAYLGTSLFVVAAVWLLSGRCRRLSGADRLLMCWWA 276
Query: 295 FTGLTHIMIEGPFVFTPDFFKKENPNFFDEVWKEYSKGDSRYVARDTATVTVEGITAVLE 474
FTGLTHI+IEGPFVFTP FF K +PNFFDEVWKEYSKGDSRYVARDT TVTVE ITAVLE
Sbjct: 277 FTGLTHILIEGPFVFTPGFFTKTSPNFFDEVWKEYSKGDSRYVARDTGTVTVERITAVLE 456
Query: 475 GPASLLAVYAIASRKSFSHILQFAVCLGQLYGCLVYFITAYLDGFNFWVGP 627
GPASLLAVYAIASRKS+SHILQFAV LGQLYGC+VY T +LDGF + P
Sbjct: 457 GPASLLAVYAIASRKSYSHILQFAVGLGQLYGCIVYLTTGFLDGFRLRIIP 609
Score = 248 bits (536), Expect(2) = 1e-067
Identities = 116/171 (67%), Positives = 124/171 (72%)
Frame = -2 / -1
Query: 626 GPTQKLKPSKYAVMK*TRHP*SWPRQTANWRMWLKDFLDAIA*TASSDAGPSNTAVIPST 447
G + L PSK V+K*T HP*S PR TANWR+WL D DAIA*TASS+AGPS+TAVI ST
Sbjct: 608 GMIRSLNPSKKPVVK*TMHP*S*PRPTANWRIWLYDLRDAIA*TASSEAGPSSTAVILST 429
Query: 446 VTVAVSLATYLESPLLYSFQTXXXXXXXXXXXXXGVKTKGPSIIMWVNPVNAHQHMSRRS 267
VTV VSLATYLESPLLYSFQT GVKTKGPS+ MWV PV AHQHMSRRS
Sbjct: 428 VTVPVSLATYLESPLLYSFQTSSKKLGLVLVKKPGVKTKGPSMSMWVRPVKAHQHMSRRS 249
Query: 266 VLDNLTHLPETSQTARKTKTEAPR*DTRISTWDSFSGTKPGRSSSAGA*GC 114
D+L HLPE SQTA TK E PR RIS+W S SGT PGRS AG *GC
Sbjct: 248 APDSLRHLPERSQTAATTKREVPRYAARISSWVSRSGT*PGRSRLAGT*GC 96
Score = 137 bits (293), Expect(2) = 5e-034
Identities = 62/141 (43%), Positives = 85/141 (60%)
Frame = -1 / -3
Query: 681 RYPDPEAVCANEIRPEVERADPEVEAVQVRGDEVNQASVELAQTDGELENVAEGLPGCNS 502
R P V RP R DP+ + VQ G +V+ ASV+L Q ELEN+A L C+
Sbjct: 663 RDSQPTTVMRQ*NRPRSSRNDPKSKPVQEAGGQVDDASVKLTQAHRELENMAVRLARCDR 484
Query: 501 VDSK**CRAFQYSGDPFDRNSCSVPSNIPRVSLTILFPNFIKEIGVLLLEEIRSEDKGPL 322
+D + RAFQ+ D F+ + VP N+P V+L +L P+F++E+G L EE +D+GPL
Sbjct: 483 IDREQRGRAFQHGRDSFNGDGAGVPGNVPGVTLAVLLPDFVEEVGAGLGEETGGKDEGPL 304
Query: 321 DHYVGQPCKCPPAHEQTVGLG 259
D YVG+ + PPAHEQ VG G
Sbjct: 303 DEYVGEAGEGPPAHEQAVGPG 241
Score = 98.2 bits (208), Expect(2) = 7e-023
Identities = 51/110 (46%), Positives = 67/110 (60%)
Frame = +3 / +3
Query: 243 KMCQIIQDRPSAHVLVGIYRVDPHNDRGALCLHS*FLQEGEPQFL**SLERV**GRL*VC 422
+M Q ++ RP AHVLVG++R PH RGAL L+ FL + +PQ L SLE V G L V
Sbjct: 225 EMPQAVRGRPPAHVLVGLHRPHPHTHRGALRLYPRFLHQDQPQLLRRSLEGVQQG*LQVR 404
Query: 423 C*GHCNCYGRRDHRCIGRPCITTCCLRYCIQEVLQPHSPVRRLSGPALRM 572
C GH + + ++H GRPC+ L I +V+QP+SPVR G LRM
Sbjct: 405 CQGHRHRHR*KNHGRAGRPCLAARGLCDRIAQVVQPYSPVRGGPGSTLRM 554
Score = 32.2 bits (64), Expect(2) = 3e-095
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +1 / +3
Query: 631 YFWAYFIGANSFWI 672
YFWAYFIGA W+
Sbjct: 612 YFWAYFIGA*RLWV 653
Score = 29.0 bits (57), Expect(2) = 1e-067
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -1 / -1
Query: 684 HRYPDPEAVCANEIRPEV 631
H +P+ +CANEI PEV
Sbjct: 665 HEIRNPQPLCANEIGPEV 612
Score = 29.0 bits (57), Expect(2) = 7e-023
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = +3 / +3
Query: 114 APLRASRAGPSGFRAAEA 167
APLRA GP G RAA A
Sbjct: 96 APLRAGEPGPPGLRAAAA 149
Score = 27.6 bits (54), Expect(2) = 5e-034
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = -3 / -2
Query: 166 ASAARNPEGPARLARKGA 113
A+AAR+P GP AR+GA
Sbjct: 148 AAAARSPGGPGSPARRGA 95
>gb|BU980134.1|BU980134 HA18L12r HA Hordeum vulgare subsp. vulgare cDNA clone HA18L12
5-PRIME, mRNA sequence
Length = 568
Score = 327 bits (709), Expect = 4e-089
Identities = 131/155 (84%), Positives = 142/155 (91%)
Frame = +1 / +1
Query: 115 HPYAPAELDLPGFVPLKLSQVEILVSYLGASVFVFLAVWLVSGRCVRLSKTDRLLMCWWA 294
HPY PA LDLPG+VPL+L+Q+EIL +YLG S+ V AVWL+SGRC RLS DRLLMCWWA
Sbjct: 103 HPYVPASLDLPGYVPLRLTQLEILAAYLGTSLLVVAAVWLLSGRCRRLSGADRLLMCWWA 282
Query: 295 FTGLTHIMIEGPFVFTPDFFKKENPNFFDEVWKEYSKGDSRYVARDTATVTVEGITAVLE 474
FTGLTHI+IEGPFVFTP FF K +PNFFDEVWKEYSKGDSRYVARDTATVTVEGITAVLE
Sbjct: 283 FTGLTHILIEGPFVFTPGFFTKTSPNFFDEVWKEYSKGDSRYVARDTATVTVEGITAVLE 462
Query: 475 GPASLLAVYAIASRKSFSHILQFAVCLGQLYGCLV 579
GPASLLAVYAIASRKS+SHILQFAVCLGQLYGC+V
Sbjct: 463 GPASLLAVYAIASRKSYSHILQFAVCLGQLYGCIV 567
Score = 239 bits (517), Expect = 1e-062
Identities = 109/155 (70%), Positives = 116/155 (74%)
Frame = -2 / -3
Query: 578 TRHP*SWPRQTANWRMWLKDFLDAIA*TASSDAGPSNTAVIPSTVTVAVSLATYLESPLL 399
T HP*S PR TANWR+WL D DAIA*TASS+AGPS+TAVIPSTVTVAVSLATYLESPLL
Sbjct: 566 TMHP*S*PRHTANWRIWLYDLRDAIA*TASSEAGPSSTAVIPSTVTVAVSLATYLESPLL 387
Query: 398 YSFQTXXXXXXXXXXXXXGVKTKGPSIIMWVNPVNAHQHMSRRSVLDNLTHLPETSQTAR 219
YSFQT GVKTKGPS+ MWV PV AHQHMSRRS D+L HLPE SQTA
Sbjct: 386 YSFQTSSKKLGLVLVKKPGVKTKGPSMSMWVRPVKAHQHMSRRSAPDSLRHLPERSQTAA 207
Query: 218 KTKTEAPR*DTRISTWDSFSGTKPGRSSSAGA*GC 114
T+ E PR RIS+W S SGT PGRS AG *GC
Sbjct: 206 TTRREVPRYAARISSWVSRSGT*PGRSRLAGT*GC 102
Score = 115 bits (245), Expect(2) = 3e-026
Identities = 50/107 (46%), Positives = 70/107 (65%)
Frame = -1 / -2
Query: 579 NQASVELAQTDGELENVAEGLPGCNSVDSK**CRAFQYSGDPFDRNSCSVPSNIPRVSLT 400
+ ASVEL Q ELE++A L C+ +D + RAFQ+ D FD + VP ++P V+L
Sbjct: 567 DDASVELTQAHRELEDMAVRLARCDRIDREQRGRAFQHGRDSFDGDGGGVPGDVPGVTLA 388
Query: 399 ILFPNFIKEIGVLLLEEIRSEDKGPLDHYVGQPCKCPPAHEQTVGLG 259
+L P+F++E+G L EE +D+GPLD YVG+ + PPAHEQ VG G
Sbjct: 387 VLLPDFVEEVGAGLGEETGGKDEGPLDEYVGEAGEGPPAHEQAVGPG 247
Score = 100 bits (212), Expect(2) = 3e-022
Identities = 52/110 (47%), Positives = 68/110 (61%)
Frame = +3 / +3
Query: 243 KMCQIIQDRPSAHVLVGIYRVDPHNDRGALCLHS*FLQEGEPQFL**SLERV**GRL*VC 422
+M Q ++ RP AHVLVG++R PH RGAL L+ FL + +PQ L SLE V G L V
Sbjct: 231 EMPQAVRGRPPAHVLVGLHRPHPHTHRGALRLYPRFLHQDQPQLLRRSLEGVQQG*LQVR 410
Query: 423 C*GHCNCYGRRDHRCIGRPCITTCCLRYCIQEVLQPHSPVRRLSGPALRM 572
GH + + RR+H GRPC+ L I +V+QP+ PVR + G ALRM
Sbjct: 411 RQGHRHRHRRRNHGRAGRPCLAARGLCDRIAQVVQPYPPVRGVPGSALRM 560
Score = 25.4 bits (49), Expect(2) = 3e-022
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +3 / +3
Query: 114 APLRASRAGPSGFRAAEA 167
APLRA P G RAA A
Sbjct: 102 APLRAGEPRPPGLRAAAA 155
Score = 23.5 bits (45), Expect(2) = 3e-026
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -3 / -1
Query: 166 ASAARNPEGPARLARKGA 113
A+AAR+P G AR+GA
Sbjct: 154 AAAARSPGGRGSPARRGA 101
>gb|BQ469495.1|BQ469495 HM04P17r HM Hordeum vulgare subsp. vulgare cDNA clone HM04P17
5-PRIME, mRNA sequence
Length = 578
Score = 325 bits (705), Expect = 2e-088
Identities = 130/154 (84%), Positives = 141/154 (91%)
Frame = +1 / +3
Query: 115 HPYAPAELDLPGFVPLKLSQVEILVSYLGASVFVFLAVWLVSGRCVRLSKTDRLLMCWWA 294
HPY PA LDLPG+VPL+L+Q+EIL +YLG S+ V AVWL+SGRC RLS DRLLMCWWA
Sbjct: 117 HPYVPASLDLPGYVPLRLTQLEILAAYLGTSLLVVAAVWLLSGRCRRLSGADRLLMCWWA 296
Query: 295 FTGLTHIMIEGPFVFTPDFFKKENPNFFDEVWKEYSKGDSRYVARDTATVTVEGITAVLE 474
FTGLTHI+IEGPFVFTP FF K +PNFFDEVWKEYSKGDSRYVARDTATVTVEGITAVLE
Sbjct: 297 FTGLTHILIEGPFVFTPGFFTKTSPNFFDEVWKEYSKGDSRYVARDTATVTVEGITAVLE 476
Query: 475 GPASLLAVYAIASRKSFSHILQFAVCLGQLYGCL 576
GPASLLAVYAIASRKS+SHILQFAVCLGQLYGC+
Sbjct: 477 GPASLLAVYAIASRKSYSHILQFAVCLGQLYGCI 578
Score = 237 bits (513), Expect = 5e-062
Identities = 108/153 (70%), Positives = 115/153 (75%)
Frame = -2 / -2
Query: 572 HP*SWPRQTANWRMWLKDFLDAIA*TASSDAGPSNTAVIPSTVTVAVSLATYLESPLLYS 393
HP*S PR TANWR+WL D DAIA*TASS+AGPS+TAVIPSTVTVAVSLATYLESPLLYS
Sbjct: 574 HP*S*PRHTANWRIWLYDLRDAIA*TASSEAGPSSTAVIPSTVTVAVSLATYLESPLLYS 395
Query: 392 FQTXXXXXXXXXXXXXGVKTKGPSIIMWVNPVNAHQHMSRRSVLDNLTHLPETSQTARKT 213
FQT GVKTKGPS+ MWV PV AHQHMSRRS D+L HLPE SQTA T
Sbjct: 394 FQTSSKKLGLVLVKKPGVKTKGPSMSMWVRPVKAHQHMSRRSAPDSLRHLPERSQTAATT 215
Query: 212 KTEAPR*DTRISTWDSFSGTKPGRSSSAGA*GC 114
+ E PR RIS+W S SGT PGRS AG *GC
Sbjct: 214 RREVPRYAARISSWVSRSGT*PGRSRLAGT*GC 116
Score = 114 bits (244), Expect(2) = 4e-026
Identities = 50/105 (47%), Positives = 69/105 (65%)
Frame = -1 / -1
Query: 573 ASVELAQTDGELENVAEGLPGCNSVDSK**CRAFQYSGDPFDRNSCSVPSNIPRVSLTIL 394
ASVEL Q ELE++A L C+ +D + RAFQ+ D FD + VP ++P V+L +L
Sbjct: 575 ASVELTQAHRELEDMAVRLARCDRIDREQRGRAFQHGRDSFDGDGGGVPGDVPGVTLAVL 396
Query: 393 FPNFIKEIGVLLLEEIRSEDKGPLDHYVGQPCKCPPAHEQTVGLG 259
P+F++E+G L EE +D+GPLD YVG+ + PPAHEQ VG G
Sbjct: 395 LPDFVEEVGAGLGEETGGKDEGPLDEYVGEAGEGPPAHEQAVGPG 261
Score = 100 bits (212), Expect(2) = 3e-022
Identities = 52/110 (47%), Positives = 68/110 (61%)
Frame = +3 / +2
Query: 243 KMCQIIQDRPSAHVLVGIYRVDPHNDRGALCLHS*FLQEGEPQFL**SLERV**GRL*VC 422
+M Q ++ RP AHVLVG++R PH RGAL L+ FL + +PQ L SLE V G L V
Sbjct: 245 EMPQAVRGRPPAHVLVGLHRPHPHTHRGALRLYPRFLHQDQPQLLRRSLEGVQQG*LQVR 424
Query: 423 C*GHCNCYGRRDHRCIGRPCITTCCLRYCIQEVLQPHSPVRRLSGPALRM 572
GH + + RR+H GRPC+ L I +V+QP+ PVR + G ALRM
Sbjct: 425 RQGHRHRHRRRNHGRAGRPCLAARGLCDRIAQVVQPYPPVRGVPGSALRM 574
Score = 25.4 bits (49), Expect(2) = 3e-022
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +3 / +2
Query: 114 APLRASRAGPSGFRAAEA 167
APLRA P G RAA A
Sbjct: 116 APLRAGEPRPPGLRAAAA 169
Score = 23.5 bits (45), Expect(2) = 4e-026
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -3 / -3
Query: 166 ASAARNPEGPARLARKGA 113
A+AAR+P G AR+GA
Sbjct: 168 AAAARSPGGRGSPARRGA 115
>gb|BE456033.3|BE456033 HVSMEg0019H01f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0019H01f, mRNA sequence
Length = 595
Score = 315 bits (682), Expect = 2e-085
Identities = 126/154 (81%), Positives = 138/154 (89%)
Frame = +1 / +1
Query: 115 HPYAPAELDLPGFVPLKLSQVEILVSYLGASVFVFLAVWLVSGRCVRLSKTDRLLMCWWA 294
HPY PA LDLPG+VPL+L+Q+EIL +YLG S+FV AVWL+SGRC RLS DRLLMCWWA
Sbjct: 94 HPYVPASLDLPGYVPLRLTQLEILAAYLGTSLFVVAAVWLLSGRCRRLSGADRLLMCWWA 273
Query: 295 FTGLTHIMIEGPFVFTPDFFKKENPNFFDEVWKEYSKGDSRYVARDTATVTVEGITAVLE 474
FTGLTHI+IEGPFV TP FF K +PNFFDEVWKEYSKGDSRYVARDTATVTVEGITAVLE
Sbjct: 274 FTGLTHILIEGPFVXTPGFFTKTSPNFFDEVWKEYSKGDSRYVARDTATVTVEGITAVLE 453
Query: 475 GPASLLAVYAIASRKSFSHILQFAVCLGQLYGCL 576
GPASLLAVYAIASR+S+SHI Q AVCL QLYGC+
Sbjct: 454 GPASLLAVYAIASRRSYSHIRQVAVCLSQLYGCM 555
Score = 222 bits (479), Expect = 2e-057
Identities = 105/153 (68%), Positives = 111/153 (72%)
Frame = -2 / -3
Query: 572 HP*SWPRQTANWRMWLKDFLDAIA*TASSDAGPSNTAVIPSTVTVAVSLATYLESPLLYS 393
HP*S R TA R+WL D DAIA*TASS+AGPS+TAVIPSTVTVAVSLATYLESPLLYS
Sbjct: 551 HP*S*LRHTAT*RIWLYDLRDAIA*TASSEAGPSSTAVIPSTVTVAVSLATYLESPLLYS 372
Query: 392 FQTXXXXXXXXXXXXXGVKTKGPSIIMWVNPVNAHQHMSRRSVLDNLTHLPETSQTARKT 213
FQT GV TKGPS+ MWV PV AHQHMSRRS D+L HLPE SQTA T
Sbjct: 371 FQTSSKKLGLVLVKNPGVXTKGPSMSMWVRPVKAHQHMSRRSAPDSLRHLPERSQTAATT 192
Query: 212 KTEAPR*DTRISTWDSFSGTKPGRSSSAGA*GC 114
K E PR RIS+W S SGT PGRS AG *GC
Sbjct: 191 KREVPRYAARISSWVSRSGT*PGRSRLAGT*GC 93
Score = 104 bits (221), Expect(2) = 3e-024
Identities = 47/105 (44%), Positives = 65/105 (61%)
Frame = -1 / -2
Query: 573 ASVELAQTDGELENVAEGLPGCNSVDSK**CRAFQYSGDPFDRNSCSVPSNIPRVSLTIL 394
ASVEL Q +L +A C+ +D + RAFQ+ D FD + VP ++P V+L +L
Sbjct: 552 ASVELTQAHRDLTYMAVRPARCDRIDREQRGRAFQHGRDSFDGDGGGVPGDVPGVTLAVL 373
Query: 393 FPNFIKEIGVLLLEEIRSEDKGPLDHYVGQPCKCPPAHEQTVGLG 259
P+F++E+G L EE D+GPLD YVG+ + PPAHEQ VG G
Sbjct: 372 LPDFVEEVGAGLGEEPGGXDEGPLDEYVGEAGEGPPAHEQAVGPG 238
Score = 27.6 bits (54), Expect(2) = 3e-024
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = -3 / -1
Query: 166 ASAARNPEGPARLARKGA 113
A+AAR+P GP AR+GA
Sbjct: 145 AAAARSPGGPGSPARRGA 92
>gb|BG368403.1|BG368403 HVSMEi0018G12f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0018G12f, mRNA sequence
Length = 556
Score = 311 bits (674), Expect = 3e-084
Identities = 126/152 (82%), Positives = 137/152 (90%)
Frame = +1 / +2
Query: 118 PYAPAELDLPGFVPLKLSQVEILVSYLGASVFVFLAVWLVSGRCVRLSKTDRLLMCWWAF 297
P PA LDLPG++PL+L+ EIL +YLG S+FV AVWL+SGRC RLS +RLLMCWWAF
Sbjct: 101 PSCPATLDLPGYLPLRLTHFEILPAYLGTSLFVVAAVWLLSGRCRRLSGANRLLMCWWAF 280
Query: 298 TGLTHIMIEGPFVFTPDFFKKENPNFFDEVWKEYSKGDSRYVARDTATVTVEGITAVLEG 477
TGLTHI+IEGPFVFTP FF K +PNFFDEVWKEYSKGDSRYVARDTATVTVEGITAVLEG
Sbjct: 281 TGLTHILIEGPFVFTPGFFTKTSPNFFDEVWKEYSKGDSRYVARDTATVTVEGITAVLEG 460
Query: 478 PASLLAVYAIASRKSFSHILQFAVCLGQLYGC 573
PASLLAVYAIASRKS+SHILQFAVCLGQLYGC
Sbjct: 461 PASLLAVYAIASRKSYSHILQFAVCLGQLYGC 556
Score = 223 bits (482), Expect = 9e-058
Identities = 104/152 (68%), Positives = 110/152 (72%)
Frame = -2 / -2
Query: 572 HP*SWPRQTANWRMWLKDFLDAIA*TASSDAGPSNTAVIPSTVTVAVSLATYLESPLLYS 393
HP*S PR TANWR+WL D DAIA*TASS+AGPS+TAVIPSTVTVAVSLATYLESPLLYS
Sbjct: 555 HP*S*PRHTANWRIWLYDLRDAIA*TASSEAGPSSTAVIPSTVTVAVSLATYLESPLLYS 376
Query: 392 FQTXXXXXXXXXXXXXGVKTKGPSIIMWVNPVNAHQHMSRRSVLDNLTHLPETSQTARKT 213
FQT GVKTKGPS+ MWV PV AHQHMSRR D+L HLPE SQTA T
Sbjct: 375 FQTSSKKLGLVLVKKPGVKTKGPSMSMWVRPVKAHQHMSRRLAPDSLRHLPERSQTAATT 196
Query: 212 KTEAPR*DTRISTWDSFSGTKPGRSSSAGA*G 117
K E PR RIS W S +G PGRS AG G
Sbjct: 195 KREVPRYAGRISKWVSRNGK*PGRSRVAGQEG 100
Score = 114 bits (244), Expect = 6e-025
Identities = 50/105 (47%), Positives = 69/105 (65%)
Frame = -1 / -1
Query: 573 ASVELAQTDGELENVAEGLPGCNSVDSK**CRAFQYSGDPFDRNSCSVPSNIPRVSLTIL 394
ASVEL Q ELE++A L C+ +D + RAFQ+ D FD + VP ++P V+L +L
Sbjct: 556 ASVELTQAHRELEDMAVRLARCDRIDREQRGRAFQHGRDSFDGDGGGVPGDVPGVTLAVL 377
Query: 393 FPNFIKEIGVLLLEEIRSEDKGPLDHYVGQPCKCPPAHEQTVGLG 259
P+F++E+G L EE +D+GPLD YVG+ + PPAHEQ VG G
Sbjct: 376 LPDFVEEVGAGLGEETGGKDEGPLDEYVGEAGEGPPAHEQAVGPG 242
>gb|CB882590.1|CB882590 HL02E21w HL Hordeum vulgare subsp. vulgare cDNA clone HL02E21
3-PRIME, mRNA sequence
Length = 560
Score = 248 bits (536), Expect(2) = 3e-082
Identities = 100/111 (90%), Positives = 105/111 (94%)
Frame = +1 / +1
Query: 250 VRLSKTDRLLMCWWAFTGLTHIMIEGPFVFTPDFFKKENPNFFDEVWKEYSKGDSRYVAR 429
+RLS DRLLMCWWAFTGLTHI+IEGPFVFTP FF K +PNFFDEVWKEYSKGDSRYVAR
Sbjct: 226 LRLSGADRLLMCWWAFTGLTHILIEGPFVFTPGFFTKTSPNFFDEVWKEYSKGDSRYVAR 405
Query: 430 DTATVTVEGITAVLEGPASLLAVYAIASRKSFSHILQFAVCLGQLYGCLVY 582
DTATVTVEGITAVLEGPASLLAVYAIASRKS+SHILQFAVCL QLYGC+VY
Sbjct: 406 DTATVTVEGITAVLEGPASLLAVYAIASRKSYSHILQFAVCLXQLYGCIVY 558
Score = 175 bits (376), Expect(2) = 8e-055
Identities = 80/110 (72%), Positives = 85/110 (77%)
Frame = -2 / -1
Query: 584 K*TRHP*SWPRQTANWRMWLKDFLDAIA*TASSDAGPSNTAVIPSTVTVAVSLATYLESP 405
K*T HP*S R TANWR+WL D DAIA*TASS+AGPS+TAVIPSTVTVAVSLATYLESP
Sbjct: 560 K*TMHP*S*XRHTANWRIWLYDLRDAIA*TASSEAGPSSTAVIPSTVTVAVSLATYLESP 381
Query: 404 LLYSFQTXXXXXXXXXXXXXGVKTKGPSIIMWVNPVNAHQHMSRRSVLDN 255
LLYSFQT GVKTKGPS+ MWV PV AHQHMSRRS D+
Sbjct: 380 LLYSFQTSSKKLGLVLVKKPGVKTKGPSMSMWVRPVKAHQHMSRRSAPDS 231
Score = 116 bits (249), Expect(2) = 8e-027
Identities = 51/108 (47%), Positives = 71/108 (65%)
Frame = -1 / -3
Query: 582 VNQASVELAQTDGELENVAEGLPGCNSVDSK**CRAFQYSGDPFDRNSCSVPSNIPRVSL 403
V+ ASVEL Q ELE++A L C+ +D + RAFQ+ D FD + VP ++P V+L
Sbjct: 558 VDDASVELTQAHRELEDMAVRLARCDRIDREQRGRAFQHGRDSFDGDGGGVPGDVPGVTL 379
Query: 402 TILFPNFIKEIGVLLLEEIRSEDKGPLDHYVGQPCKCPPAHEQTVGLG 259
+L P+F++E+G L EE +D+GPLD YVG+ + PPAHEQ VG G
Sbjct: 378 AVLLPDFVEEVGAGLGEETGGKDEGPLDEYVGEAGEGPPAHEQAVGPG 235
Score = 77.6 bits (163), Expect(2) = 3e-082
Identities = 29/43 (67%), Positives = 36/43 (83%)
Frame = +1 / +2
Query: 115 HPYAPAELDLPGFVPLKLSQVEILVSYLGASVFVFLAVWLVSG 243
HPY PA LDLPG+VPL+L+Q+EIL +YLG S+ V AVWL+SG
Sbjct: 104 HPYVPASLDLPGYVPLRLTQLEILAAYLGTSLLVVAAVWLLSG 232
Score = 59.3 bits (123), Expect(2) = 8e-055
Identities = 27/43 (62%), Positives = 29/43 (67%)
Frame = -2 / -3
Query: 242 PETSQTARKTKTEAPR*DTRISTWDSFSGTKPGRSSSAGA*GC 114
PE SQTA T+ E PR RIS+W S SGT PGRS AG *GC
Sbjct: 231 PERSQTAATTRREVPRYAARISSWVSRSGT*PGRSRLAGT*GC 103
Score = 23.5 bits (45), Expect(2) = 8e-027
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -3 / -1
Query: 166 ASAARNPEGPARLARKGA 113
A+AAR+P G AR+GA
Sbjct: 155 AAAARSPGGRGSPARRGA 102
>gb|BI780821.2|BI780821 EBma05_SQ001_A11_R maternal, 12 DPA, no treatment, cv Optic, EBma05
Hordeum vulgare subsp. vulgare cDNA clone
EBma05_SQ001_A11 5', mRNA sequence
Length = 482
Score = 289 bits (626), Expect = 1e-077
Identities = 116/139 (83%), Positives = 126/139 (90%)
Frame = +1 / +2
Query: 115 HPYAPAELDLPGFVPLKLSQVEILVSYLGASVFVFLAVWLVSGRCVRLSKTDRLLMCWWA 294
HPY PA LDLPG+VPL+L+Q+EIL +YLG S+ V AVWL+SGRC RLS DRLLMCWWA
Sbjct: 65 HPYVPASLDLPGYVPLRLTQLEILAAYLGTSLLVVAAVWLLSGRCRRLSGADRLLMCWWA 244
Query: 295 FTGLTHIMIEGPFVFTPDFFKKENPNFFDEVWKEYSKGDSRYVARDTATVTVEGITAVLE 474
FTGLTHI+IEGPFVFTP FF K +PNFFDEVWKEYSKGDSRYVARDTATVTVEGITAVLE
Sbjct: 245 FTGLTHILIEGPFVFTPGFFTKTSPNFFDEVWKEYSKGDSRYVARDTATVTVEGITAVLE 424
Query: 475 GPASLLAVYAIASRKSFSH 531
GPASLLAVYAIASRKS+SH
Sbjct: 425 GPASLLAVYAIASRKSYSH 481
Score = 210 bits (453), Expect = 9e-054
Identities = 97/139 (69%), Positives = 103/139 (74%)
Frame = -2 / -3
Query: 530 WLKDFLDAIA*TASSDAGPSNTAVIPSTVTVAVSLATYLESPLLYSFQTXXXXXXXXXXX 351
WL D DAIA*TASS+AGPS+TAVIPSTVTVAVSLATYLESPLLYSFQT
Sbjct: 480 WLYDLRDAIA*TASSEAGPSSTAVIPSTVTVAVSLATYLESPLLYSFQTSSKKLGLVLVK 301
Query: 350 XXGVKTKGPSIIMWVNPVNAHQHMSRRSVLDNLTHLPETSQTARKTKTEAPR*DTRISTW 171
GVKTKGPS+ MWV PV AHQHMSRRS D+L HLPE SQTA T+ E PR RIS+W
Sbjct: 300 KPGVKTKGPSMSMWVRPVKAHQHMSRRSAPDSLRHLPERSQTAATTRREVPRYAARISSW 121
Query: 170 DSFSGTKPGRSSSAGA*GC 114
S SGT PGRS AG *GC
Sbjct: 120 VSRSGT*PGRSRLAGT*GC 64
Score = 97.3 bits (206), Expect(2) = 6e-021
Identities = 41/91 (45%), Positives = 59/91 (64%)
Frame = -1 / -2
Query: 531 VAEGLPGCNSVDSK**CRAFQYSGDPFDRNSCSVPSNIPRVSLTILFPNFIKEIGVLLLE 352
+A L C+ +D + RAFQ+ D FD + VP ++P V+L +L P+F++E+G L E
Sbjct: 481 MAVRLARCDRIDREQRGRAFQHGRDSFDGDGGGVPGDVPGVTLAVLLPDFVEEVGAGLGE 302
Query: 351 EIRSEDKGPLDHYVGQPCKCPPAHEQTVGLG 259
E +D+GPLD YVG+ + PPAHEQ VG G
Sbjct: 301 ETGGKDEGPLDEYVGEAGEGPPAHEQAVGPG 209
Score = 23.5 bits (45), Expect(2) = 6e-021
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -3 / -1
Query: 166 ASAARNPEGPARLARKGA 113
A+AAR+P G AR+GA
Sbjct: 116 AAAARSPGGRGSPARRGA 63
>gb|BQ468056.1|BQ468056 HR01M23r HR Hordeum vulgare subsp. vulgare cDNA clone HR01M23
5-PRIME, mRNA sequence
Length = 462
Score = 281 bits (607), Expect = 5e-075
Identities = 113/135 (83%), Positives = 122/135 (90%)
Frame = +1 / +3
Query: 115 HPYAPAELDLPGFVPLKLSQVEILVSYLGASVFVFLAVWLVSGRCVRLSKTDRLLMCWWA 294
HPY PA LDLPG+VPL+L+Q+EIL +YLG S+ V AVWL+SGRC RLS DRLLMCWWA
Sbjct: 57 HPYVPASLDLPGYVPLRLTQLEILAAYLGTSLLVVAAVWLLSGRCRRLSGADRLLMCWWA 236
Query: 295 FTGLTHIMIEGPFVFTPDFFKKENPNFFDEVWKEYSKGDSRYVARDTATVTVEGITAVLE 474
FTGLTHI+IEGPFVFTP FF K +PNFFDEVWKEYSKGDSRYVARDTATVTVEGITAVLE
Sbjct: 237 FTGLTHILIEGPFVFTPGFFTKTSPNFFDEVWKEYSKGDSRYVARDTATVTVEGITAVLE 416
Query: 475 GPASLLAVYAIASRK 519
GPASLLAVYAIASRK
Sbjct: 417 GPASLLAVYAIASRK 461
Score = 202 bits (436), Expect = 2e-051
Identities = 94/133 (70%), Positives = 100/133 (75%)
Frame = -2 / -3
Query: 512 DAIA*TASSDAGPSNTAVIPSTVTVAVSLATYLESPLLYSFQTXXXXXXXXXXXXXGVKT 333
DAIA*TASS+AGPS+TAVIPSTVTVAVSLATYLESPLLYSFQT GVKT
Sbjct: 454 DAIA*TASSEAGPSSTAVIPSTVTVAVSLATYLESPLLYSFQTSSKKLGLVLVKKPGVKT 275
Query: 332 KGPSIIMWVNPVNAHQHMSRRSVLDNLTHLPETSQTARKTKTEAPR*DTRISTWDSFSGT 153
KGPS+ MWV PV AHQHMSRRS D+L HLPE SQTA T+ E PR RIS+W S SGT
Sbjct: 274 KGPSMSMWVRPVKAHQHMSRRSAPDSLRHLPERSQTAATTRREVPRYAARISSWVSRSGT 95
Query: 152 KPGRSSSAGA*GC 114
PGRS AG *GC
Sbjct: 94 *PGRSRLAGT*GC 56
Score = 96.8 bits (205), Expect(2) = 8e-021
Identities = 40/87 (45%), Positives = 57/87 (65%)
Frame = -1 / -2
Query: 519 LPGCNSVDSK**CRAFQYSGDPFDRNSCSVPSNIPRVSLTILFPNFIKEIGVLLLEEIRS 340
L C+ +D + RAFQ+ D FD + VP ++P V+L +L P+F++E+G L EE
Sbjct: 461 LARCDRIDREQRGRAFQHGRDSFDGDGGGVPGDVPGVTLAVLLPDFVEEVGAGLGEETGG 282
Query: 339 EDKGPLDHYVGQPCKCPPAHEQTVGLG 259
+D+GPLD YVG+ + PPAHEQ VG G
Sbjct: 281 KDEGPLDEYVGEAGEGPPAHEQAVGPG 201
Score = 23.5 bits (45), Expect(2) = 8e-021
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -3 / -1
Query: 166 ASAARNPEGPARLARKGA 113
A+AAR+P G AR+GA
Sbjct: 108 AAAARSPGGRGSPARRGA 55
>gb|CA019925.1|CA019925 HV13L19r HV Hordeum vulgare subsp. vulgare cDNA clone HV13L19
5-PRIME, mRNA sequence
Length = 467
Score = 274 bits (593), Expect = 4e-073
Identities = 110/132 (83%), Positives = 119/132 (90%)
Frame = +1 / +2
Query: 115 HPYAPAELDLPGFVPLKLSQVEILVSYLGASVFVFLAVWLVSGRCVRLSKTDRLLMCWWA 294
HPY PA LDLPG+VPL+L+Q+EIL +YLG S+ V AVWL+SGRC RLS DRLLMCWWA
Sbjct: 71 HPYVPASLDLPGYVPLRLTQLEILAAYLGTSLLVVAAVWLLSGRCRRLSGADRLLMCWWA 250
Query: 295 FTGLTHIMIEGPFVFTPDFFKKENPNFFDEVWKEYSKGDSRYVARDTATVTVEGITAVLE 474
FTGLTHI+IEGPFVFTP FF K +PNFFDEVWKEYSKGDSRYVARDTATVTVEGITAVLE
Sbjct: 251 FTGLTHILIEGPFVFTPGFFTKTSPNFFDEVWKEYSKGDSRYVARDTATVTVEGITAVLE 430
Query: 475 GPASLLAVYAIA 510
GPASLLAVYAIA
Sbjct: 431 GPASLLAVYAIA 466
Score = 199 bits (430), Expect = 1e-050
Identities = 93/132 (70%), Positives = 99/132 (75%)
Frame = -2 / -3
Query: 509 AIA*TASSDAGPSNTAVIPSTVTVAVSLATYLESPLLYSFQTXXXXXXXXXXXXXGVKTK 330
AIA*TASS+AGPS+TAVIPSTVTVAVSLATYLESPLLYSFQT GVKTK
Sbjct: 465 AIA*TASSEAGPSSTAVIPSTVTVAVSLATYLESPLLYSFQTSSKKLGLVLVKKPGVKTK 286
Query: 329 GPSIIMWVNPVNAHQHMSRRSVLDNLTHLPETSQTARKTKTEAPR*DTRISTWDSFSGTK 150
GPS+ MWV PV AHQHMSRRS D+L HLPE SQTA T+ E PR RIS+W S SGT
Sbjct: 285 GPSMSMWVRPVKAHQHMSRRSAPDSLRHLPERSQTAATTRREVPRYAARISSWVSRSGT* 106
Query: 149 PGRSSSAGA*GC 114
PGRS AG *GC
Sbjct: 105 PGRSRLAGT*GC 70
>gb|BQ461122.1|BQ461122 HE01C10r HE Hordeum vulgare subsp. vulgare cDNA clone HE01C10
5-PRIME, mRNA sequence
Length = 490
Score = 270 bits (585), Expect = 6e-072
Identities = 108/130 (83%), Positives = 117/130 (90%)
Frame = +1 / +3
Query: 115 HPYAPAELDLPGFVPLKLSQVEILVSYLGASVFVFLAVWLVSGRCVRLSKTDRLLMCWWA 294
HPY PA LDLPG+VPL+L+Q+EIL +YLG S+ V AVWL+SGRC RLS DRLLMCWWA
Sbjct: 99 HPYVPASLDLPGYVPLRLTQLEILAAYLGTSLLVVAAVWLLSGRCRRLSGADRLLMCWWA 278
Query: 295 FTGLTHIMIEGPFVFTPDFFKKENPNFFDEVWKEYSKGDSRYVARDTATVTVEGITAVLE 474
FTGLTHI+IEGPFVFTP FF K +PNFFDEVWKEYSKGDSRYVARDTATVTVEGITAVLE
Sbjct: 279 FTGLTHILIEGPFVFTPGFFTKTSPNFFDEVWKEYSKGDSRYVARDTATVTVEGITAVLE 458
Query: 475 GPASLLAVYA 504
GPASLLAVYA
Sbjct: 459 GPASLLAVYA 488
Score = 198 bits (426), Expect = 5e-050
Identities = 92/131 (70%), Positives = 98/131 (74%)
Frame = -2 / -1
Query: 506 IA*TASSDAGPSNTAVIPSTVTVAVSLATYLESPLLYSFQTXXXXXXXXXXXXXGVKTKG 327
IA*TASS+AGPS+TAVIPSTVTVAVSLATYLESPLLYSFQT GVKTKG
Sbjct: 490 IA*TASSEAGPSSTAVIPSTVTVAVSLATYLESPLLYSFQTSSKKLGLVLVKKPGVKTKG 311
Query: 326 PSIIMWVNPVNAHQHMSRRSVLDNLTHLPETSQTARKTKTEAPR*DTRISTWDSFSGTKP 147
PS+ MWV PV AHQHMSRRS D+L HLPE SQTA T+ E PR RIS+W S SGT P
Sbjct: 310 PSMSMWVRPVKAHQHMSRRSAPDSLRHLPERSQTAATTRREVPRYAARISSWVSRSGT*P 131
Query: 146 GRSSSAGA*GC 114
GRS AG *GC
Sbjct: 130 GRSRLAGT*GC 98
>gb|BG368408.1|BG368408 HVSMEi0018I02f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0018I02f, mRNA sequence
Length = 552
Score = 247 bits (534), Expect(2) = 1e-070
Identities = 102/132 (77%), Positives = 112/132 (84%)
Frame = +1 / +2
Query: 118 PYAPAELDLPGFVPLKLSQVEILVSYLGASVFVFLAVWLVSGRCVRLSKTDRLLMCWWAF 297
P E PG +PL+L+Q+EIL +YLG S+FV AVWL+SGRC RLS DRLLMCWWAF
Sbjct: 98 PLRAGEPGPPGLLPLRLTQLEILAAYLGTSLFVVAAVWLLSGRCRRLSGADRLLMCWWAF 277
Query: 298 TGLTHIMIEGPFVFTPDFFKKENPNFFDEVWKEYSKGDSRYVARDTATVTVEGITAVLEG 477
TGLTHI+IEGPFVFTP FF K +PNFFD+VWKEYSKGDSR VARDTATVTVEGITAVLEG
Sbjct: 278 TGLTHILIEGPFVFTPGFFTKTSPNFFDQVWKEYSKGDSRSVARDTATVTVEGITAVLEG 457
Query: 478 PASLLAVYAIAS 513
PA LLAVYAIAS
Sbjct: 458 PAFLLAVYAIAS 493
Score = 181 bits (389), Expect(2) = 1e-046
Identities = 86/127 (67%), Positives = 92/127 (72%)
Frame = -2 / -1
Query: 512 DAIA*TASSDAGPSNTAVIPSTVTVAVSLATYLESPLLYSFQTXXXXXXXXXXXXXGVKT 333
+AIA*TAS AGPS+TAVIPSTVTVAVSLAT LESPLLYSFQT GVKT
Sbjct: 492 EAIA*TASRKAGPSSTAVIPSTVTVAVSLATDLESPLLYSFQTWSKKLGLVLVKKPGVKT 313
Query: 332 KGPSIIMWVNPVNAHQHMSRRSVLDNLTHLPETSQTARKTKTEAPR*DTRISTWDSFSGT 153
KGPS+ MWV PV AHQHMSRRS D+L HLPE SQTA TK E PR RIS+W S SG+
Sbjct: 312 KGPSMSMWVRPVKAHQHMSRRSAPDSLRHLPERSQTAATTKREVPRYAARISSWVSRSGS 133
Query: 152 KPGRSSS 132
KPG S
Sbjct: 132 KPGGPGS 112
Score = 40.0 bits (81), Expect(2) = 1e-070
Identities = 15/18 (83%), Positives = 17/18 (94%)
Frame = +1 / +1
Query: 517 KSFSHILQFAVCLGQLYG 570
+S+SHI QFAVCLGQLYG
Sbjct: 496 QSYSHIPQFAVCLGQLYG 549
Score = 25.8 bits (50), Expect(2) = 1e-046
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -2 / -2
Query: 569 P*SWPRQTANWRMWLKDF 516
P*S PR TAN +WL D+
Sbjct: 548 P*S*PRHTAN*GIWLYDW 495
>gb|BQ768106.1|BQ768106 EBro08_SQ010_O18_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ010_O18 5', mRNA sequence
Length = 467
Score = 256 bits (554), Expect = 1e-067
Identities = 101/123 (82%), Positives = 110/123 (89%)
Frame = +1 / +1
Query: 115 HPYAPAELDLPGFVPLKLSQVEILVSYLGASVFVFLAVWLVSGRCVRLSKTDRLLMCWWA 294
HPY PA LDLPG+VPL+L+Q+EIL +YLG S+ V AVWL+SGRC RLS DRLLMCWWA
Sbjct: 97 HPYVPASLDLPGYVPLRLTQLEILAAYLGTSLLVVAAVWLLSGRCRRLSGADRLLMCWWA 276
Query: 295 FTGLTHIMIEGPFVFTPDFFKKENPNFFDEVWKEYSKGDSRYVARDTATVTVEGITAVLE 474
FTGLTHI+IEGPFVFTP FF K +PNFFDEVWKEYSKGDSRYVARDTATVTVEGITAVLE
Sbjct: 277 FTGLTHILIEGPFVFTPGFFTKTSPNFFDEVWKEYSKGDSRYVARDTATVTVEGITAVLE 456
Query: 475 GPA 483
GPA
Sbjct: 457 GPA 465
Score = 186 bits (400), Expect = 2e-046
Identities = 85/124 (68%), Positives = 91/124 (73%)
Frame = -2 / -1
Query: 485 DAGPSNTAVIPSTVTVAVSLATYLESPLLYSFQTXXXXXXXXXXXXXGVKTKGPSIIMWV 306
+AGPS+TAVIPSTVTVAVSLATYLESPLLYSFQT GVKTKGPS+ MWV
Sbjct: 467 EAGPSSTAVIPSTVTVAVSLATYLESPLLYSFQTSSKKLGLVLVKKPGVKTKGPSMSMWV 288
Query: 305 NPVNAHQHMSRRSVLDNLTHLPETSQTARKTKTEAPR*DTRISTWDSFSGTKPGRSSSAG 126
PV AHQHMSRRS D+L HLPE SQTA T+ E PR RIS+W S SGT PGRS AG
Sbjct: 287 RPVKAHQHMSRRSAPDSLRHLPERSQTAATTRREVPRYAARISSWVSRSGT*PGRSRLAG 108
Query: 125 A*GC 114
*GC
Sbjct: 107 T*GC 96
>gb|BQ659383.1|BQ659383 HE01C10u HE Hordeum vulgare subsp. vulgare cDNA clone HE01C10
3-PRIME, mRNA sequence
Length = 499
Score = 252 bits (545), Expect = 2e-066
Identities = 104/126 (82%), Positives = 110/126 (87%)
Frame = +1 / -2
Query: 394 EYSKGDSRYVARDTATVTVEGITAVLEGPASLLAVYAIASRKSFSHILQFAVCLGQLYGC 573
EYSKGDSRYVARDTATVTVEGITAVLEGPASLLAVYAIASRKS+SHILQFAVCLGQLYGC
Sbjct: 498 EYSKGDSRYVARDTATVTVEGITAVLEGPASLLAVYAIASRKSYSHILQFAVCLGQLYGC 319
Query: 574 LVYFITAYLDGFNFWVGPFYFWAYFIGANSFWIWIPMLIAIRSWKKTCAAFQAEKVKKTK 753
+VYF TAYLDGFNFW+ PFYFWAYFIGANS W+ IP+LIA RSW K CAA + K K
Sbjct: 318 IVYFTTAYLDGFNFWISPFYFWAYFIGANSSWVVIPLLIARRSWNKICAAVHQSEKVKNK 139
Query: 754 *KLSLA 771
* L LA
Sbjct: 138 *FLQLA 121
Score = 190 bits (410), Expect = 8e-048
Identities = 88/112 (78%), Positives = 96/112 (85%)
Frame = -2 / +2
Query: 728 *NAAQVFFQDLMAMSIGIQIQKLFAPMKYAQK*NGPTQKLKPSKYAVMK*TRHP*SWPRQ 549
* AAQ+ FQ L+A+S GI +LFAPMKYAQK*NG QKLKPSK AV+K*T HP*S PR
Sbjct: 164 *TAAQILFQLLLAISNGITTHELFAPMKYAQK*NGLIQKLKPSK*AVVK*TMHP*S*PRH 343
Query: 548 TANWRMWLKDFLDAIA*TASSDAGPSNTAVIPSTVTVAVSLATYLESPLLYS 393
TANWR+WL D DAIA*TASS+AGPS+TAVIPSTVTVAVSLATYLESPLLYS
Sbjct: 344 TANWRIWLYDLRDAIA*TASSEAGPSSTAVIPSTVTVAVSLATYLESPLLYS 499
Score = 120 bits (257), Expect = 1e-026
Identities = 55/110 (50%), Positives = 71/110 (64%)
Frame = -1 / +1
Query: 723 RGASFLPGPYGDEHRYPDPEAVCANEIRPEVERADPEVEAVQVRGDEVNQASVELAQTDG 544
R A +P P D+ R +P VCA+EI PEVER DPEVEAVQV G EV+ ASVEL Q
Sbjct: 169 RRADLVPAPPRDQQRNHNPRTVCADEICPEVERTDPEVEAVQVGGGEVDDASVELTQAHR 348
Query: 543 ELENVAEGLPGCNSVDSK**CRAFQYSGDPFDRNSCSVPSNIPRVSLTIL 394
ELE++A L C+ +D + RAFQ+ D FD + VP ++P V+L +L
Sbjct: 349 ELEDMAVRLARCDRIDREQRGRAFQHGRDSFDGDGGGVPGDVPGVTLAVL 498
>gb|AL510966.1|AL510966 AL510966 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY06J02u 3',
mRNA sequence
Length = 544
Score = 226 bits (487), Expect(2) = 5e-061
Identities = 93/115 (80%), Positives = 99/115 (86%)
Frame = +1 / -3
Query: 427 RDTATVTVEGITAVLEGPASLLAVYAIASRKSFSHILQFAVCLGQLYGCLVYFITAYLDG 606
RDTATVTVEGITAVLEGPASLLAVYAIASRKS+SHILQFAVCLGQLYGC+VYF TAYLDG
Sbjct: 500 RDTATVTVEGITAVLEGPASLLAVYAIASRKSYSHILQFAVCLGQLYGCIVYFTTAYLDG 321
Query: 607 FNFWVGPFYFWAYFIGANSFWIWIPMLIAIRSWKKTCAAFQAEKVKKTK*KLSLA 771
FNFW+ PFYFWAY IGANS W+ IP+LIA RSW K CAA + KTK* L LA
Sbjct: 320 FNFWISPFYFWAYXIGANSSWVVIPLLIARRSWNKXCAAVHQSEKVKTK*FLQLA 156
Score = 161 bits (347), Expect(2) = 3e-041
Identities = 78/110 (70%), Positives = 86/110 (78%)
Frame = -2 / +1
Query: 755 YLVFFTFSA*NAAQVFFQDLMAMSIGIQIQKLFAPMKYAQK*NGPTQKLKPSKYAVMK*T 576
YLV * AA + FQ L+A+S GI +LFAP KYAQK*NG QKLKPSK AV+K*T
Sbjct: 172 YLVLTFSLW*TAAXILFQLLLAISNGITTHELFAPXKYAQK*NGLIQKLKPSK*AVVK*T 351
Query: 575 RHP*SWPRQTANWRMWLKDFLDAIA*TASSDAGPSNTAVIPSTVTVAVSL 426
HP*S PR TANWR+WL D DAIA*TASS+AGPS+TAVIPSTVTVAVSL
Sbjct: 352 MHP*S*PRHTANWRIWLYDLRDAIA*TASSEAGPSSTAVIPSTVTVAVSL 501
Score = 104 bits (222), Expect = 7e-022
Identities = 49/99 (49%), Positives = 62/99 (62%)
Frame = -1 / +3
Query: 723 RGASFLPGPYGDEHRYPDPEAVCANEIRPEVERADPEVEAVQVRGDEVNQASVELAQTDG 544
R A +P P D+ R +P VCA+ I PEVER DPEVEAVQV G EV+ ASVEL Q
Sbjct: 204 RRAXLVPAPPRDQQRNHNPRTVCADXICPEVERTDPEVEAVQVGGGEVDDASVELTQAHR 383
Query: 543 ELENVAEGLPGCNSVDSK**CRAFQYSGDPFDRNSCSVP 427
ELE++A L C+ ++ + RAFQ+ D FD + VP
Sbjct: 384 ELEDMAVRLARCDRINREQRGRAFQHGRDSFDGDGXGVP 500
Score = 29.0 bits (57), Expect(2) = 5e-061
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = +1 / -2
Query: 391 KEYSKGDSRYVAR 429
KEYSKGDS YVA+
Sbjct: 537 KEYSKGDSXYVAQ 499
Score = 27.2 bits (53), Expect(2) = 3e-041
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = -2 / +2
Query: 425 ATYLESPLLYSF 390
AT LESPLLYSF
Sbjct: 503 ATXLESPLLYSF 538
>gb|CA029314.1|CA029314 HZ64N12r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ64N12
5-PRIME, mRNA sequence
Length = 405
Score = 230 bits (496), Expect = 1e-059
Identities = 89/111 (80%), Positives = 98/111 (88%)
Frame = +1 / +2
Query: 115 HPYAPAELDLPGFVPLKLSQVEILVSYLGASVFVFLAVWLVSGRCVRLSKTDRLLMCWWA 294
HPY PA LDLPG+VPL+L+Q+EIL +YLG S+ V AVWL+SGRC RLS DRLLMCWWA
Sbjct: 71 HPYVPASLDLPGYVPLRLTQLEILAAYLGTSLLVVAAVWLLSGRCRRLSGADRLLMCWWA 250
Query: 295 FTGLTHIMIEGPFVFTPDFFKKENPNFFDEVWKEYSKGDSRYVARDTATVT 447
FTGLTHI+IEGPFVFTP FF K +PNFFDEVWKEYSKGDSRYVARDTATVT
Sbjct: 251 FTGLTHILIEGPFVFTPGFFTKTSPNFFDEVWKEYSKGDSRYVARDTATVT 403
Score = 162 bits (348), Expect = 3e-039
Identities = 75/112 (66%), Positives = 79/112 (70%)
Frame = -2 / -1
Query: 449 TVTVAVSLATYLESPLLYSFQTXXXXXXXXXXXXXGVKTKGPSIIMWVNPVNAHQHMSRR 270
TVTVAVSLATYLESPLLYSFQT GVKTKGPS+ MWV PV AHQHMSRR
Sbjct: 405 TVTVAVSLATYLESPLLYSFQTSSKKLGLVLVKKPGVKTKGPSMSMWVRPVKAHQHMSRR 226
Query: 269 SVLDNLTHLPETSQTARKTKTEAPR*DTRISTWDSFSGTKPGRSSSAGA*GC 114
S D+L HLPE SQTA T+ E PR RIS+W S SGT PGRS AG *GC
Sbjct: 225 SAPDSLRHLPERSQTAATTRREVPRYAARISSWVSRSGT*PGRSRLAGT*GC 70
>gb|AL502789.1|AL502789 AL502789 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW08L16u 3', mRNA sequence
Length = 511
Score = 228 bits (493), Expect = 3e-059
Identities = 94/115 (81%), Positives = 100/115 (86%)
Frame = +1 / -2
Query: 427 RDTATVTVEGITAVLEGPASLLAVYAIASRKSFSHILQFAVCLGQLYGCLVYFITAYLDG 606
RDTATVTVEGITAVLEGPASLLAVYAIASRKS+SHILQFAVCLGQLYGC+VYF TAYLDG
Sbjct: 483 RDTATVTVEGITAVLEGPASLLAVYAIASRKSYSHILQFAVCLGQLYGCIVYFTTAYLDG 304
Query: 607 FNFWVGPFYFWAYFIGANSFWIWIPMLIAIRSWKKTCAAFQAEKVKKTK*KLSLA 771
FNFW+ PFYFWAYFIGANS W+ IP+LIA RSW K CAA + KTK* L LA
Sbjct: 303 FNFWISPFYFWAYFIGANSSWVVIPLLIARRSWNKICAAVHQSEKVKTK*FLQLA 139
Score = 167 bits (359), Expect = 8e-041
Identities = 80/110 (72%), Positives = 88/110 (80%)
Frame = -2 / +2
Query: 755 YLVFFTFSA*NAAQVFFQDLMAMSIGIQIQKLFAPMKYAQK*NGPTQKLKPSKYAVMK*T 576
YLV * AAQ+ FQ L+A+S GI +LFAPMKYAQK*NG QKLKPSK AV+K*T
Sbjct: 155 YLVLTFSLW*TAAQILFQLLLAISNGITTHELFAPMKYAQK*NGLIQKLKPSK*AVVK*T 334
Query: 575 RHP*SWPRQTANWRMWLKDFLDAIA*TASSDAGPSNTAVIPSTVTVAVSL 426
HP*S PR TANWR+WL D DAIA*TASS+AGPS+TAVIPSTVTVAVSL
Sbjct: 335 MHP*S*PRHTANWRIWLYDLRDAIA*TASSEAGPSSTAVIPSTVTVAVSL 484
Score = 109 bits (232), Expect = 3e-023
Identities = 51/99 (51%), Positives = 63/99 (63%)
Frame = -1 / +1
Query: 723 RGASFLPGPYGDEHRYPDPEAVCANEIRPEVERADPEVEAVQVRGDEVNQASVELAQTDG 544
R A +P P D+ R +P VCA+EI PEVER DPEVEAVQV G EV+ ASVEL Q
Sbjct: 187 RRADLVPAPPRDQQRNHNPRTVCADEICPEVERTDPEVEAVQVGGGEVDDASVELTQAHR 366
Query: 543 ELENVAEGLPGCNSVDSK**CRAFQYSGDPFDRNSCSVP 427
ELE++A L C+ +D + RAFQ+ D FD + VP
Sbjct: 367 ELEDMAVRLARCDRIDREQRGRAFQHGRDSFDGDGGGVP 483
>gb|CA021037.1|CA021037 HZ38O19r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ38O19
5-PRIME, mRNA sequence
Length = 447
Score = 210 bits (454), Expect = 7e-054
Identities = 80/102 (78%), Positives = 89/102 (87%)
Frame = +1 / +2
Query: 115 HPYAPAELDLPGFVPLKLSQVEILVSYLGASVFVFLAVWLVSGRCVRLSKTDRLLMCWWA 294
HPY PA LDLPG+VPL+L+Q+EIL +YLG S+ V AVWL+SGRC RLS DRLLMCWWA
Sbjct: 140 HPYVPASLDLPGYVPLRLTQLEILAAYLGTSLLVVAAVWLLSGRCRRLSGADRLLMCWWA 319
Query: 295 FTGLTHIMIEGPFVFTPDFFKKENPNFFDEVWKEYSKGDSRY 420
FTGLTHI+IEGPFVFTP FF K +PNFFDEVWKEYSKGDSRY
Sbjct: 320 FTGLTHILIEGPFVFTPGFFTKTSPNFFDEVWKEYSKGDSRY 445
Score = 144 bits (310), Expect = 5e-034
Identities = 66/103 (64%), Positives = 70/103 (67%)
Frame = -2 / -1
Query: 422 TYLESPLLYSFQTXXXXXXXXXXXXXGVKTKGPSIIMWVNPVNAHQHMSRRSVLDNLTHL 243
TYLESPLLYSFQT GVKTKGPS+ MWV PV AHQHMSRRS D+L HL
Sbjct: 447 TYLESPLLYSFQTSSKKLGLVLVKKPGVKTKGPSMSMWVRPVKAHQHMSRRSAPDSLRHL 268
Query: 242 PETSQTARKTKTEAPR*DTRISTWDSFSGTKPGRSSSAGA*GC 114
PE SQTA T+ E PR RIS+W S SGT PGRS AG *GC
Sbjct: 267 PERSQTAATTRREVPRYAARISSWVSRSGT*PGRSRLAGT*GC 139
>gb|CA027775.1|CA027775 HZ59P23r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ59P23
5-PRIME, mRNA sequence
Length = 510
Score = 111 bits (236), Expect(2) = 2e-047
Identities = 40/45 (88%), Positives = 42/45 (93%)
Frame = +1 / +2
Query: 286 WWAFTGLTHIMIEGPFVFTPDFFKKENPNFFDEVWKEYSKGDSRY 420
WWAFTGLTHI+IEGPFVFTP FF K +PNFFDEVWKEYSKGDSRY
Sbjct: 374 WWAFTGLTHILIEGPFVFTPGFFTKTSPNFFDEVWKEYSKGDSRY 508
Score = 98.7 bits (209), Expect(2) = 2e-047
Identities = 39/56 (69%), Positives = 46/56 (82%)
Frame = +1 / +1
Query: 115 HPYAPAELDLPGFVPLKLSQVEILVSYLGASVFVFLAVWLVSGRCVRLSKTDRLLM 282
HPY PA LDLPG+VPL+L+Q+EIL +YLG S+ V AVWL+SGRC RLS DRLLM
Sbjct: 202 HPYVPASLDLPGYVPLRLTQLEILAAYLGTSLLVVAAVWLLSGRCRRLSGADRLLM 369
Score = 82.2 bits (173), Expect(2) = 5e-029
Identities = 37/57 (64%), Positives = 40/57 (70%)
Frame = -2 / -2
Query: 284 HMSRRSVLDNLTHLPETSQTARKTKTEAPR*DTRISTWDSFSGTKPGRSSSAGA*GC 114
HMSRRS D+L HLPE SQTA T+ E PR RIS+W S SGT PGRS AG *GC
Sbjct: 371 HMSRRSAPDSLRHLPERSQTAATTRREVPRYAARISSWVSRSGT*PGRSRLAGT*GC 201
Score = 65.7 bits (137), Expect(2) = 5e-029
Identities = 29/46 (63%), Positives = 30/46 (65%)
Frame = -2 / -1
Query: 422 TYLESPLLYSFQTXXXXXXXXXXXXXGVKTKGPSIIMWVNPVNAHQ 285
TYLESPLLYSFQT GVKTKGPS+ MWV PV AHQ
Sbjct: 510 TYLESPLLYSFQTSSKKLGLVLVKKPGVKTKGPSMSMWVRPVKAHQ 373
>gb|BQ768059.1|BQ768059 EBro08_SQ010_H13_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ010_H13 5', mRNA sequence
Length = 369
Score = 137 bits (293), Expect = 1e-031
Identities = 53/73 (72%), Positives = 58/73 (79%)
Frame = +1 / +3
Query: 553 LGQLYGCLVYFITAYLDGFNFWVGPFYFWAYFIGANSFWIWIPMLIAIRSWKKTCAAFQA 732
LGQLYGC+VYF TAYLDGFNFW+ PFYFWAYFIGANS W+ IP+LIA RSW K CAA
Sbjct: 3 LGQLYGCIVYFTTAYLDGFNFWISPFYFWAYFIGANSSWVVIPLLIARRSWNKICAAVHQ 182
Query: 733 EKVKKTK*KLSLA 771
+ KTK* L LA
Sbjct: 183 SEKVKTK*FLQLA 221
>gb|BQ767248.1|BQ767248 EBro08_SQ008_J12_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ008_J12 5', mRNA sequence
Length = 359
Score = 125 bits (267), Expect = 4e-028
Identities = 48/68 (70%), Positives = 53/68 (77%)
Frame = +1 / +1
Query: 568 GCLVYFITAYLDGFNFWVGPFYFWAYFIGANSFWIWIPMLIAIRSWKKTCAAFQAEKVKK 747
GC+VYF TAYLDGFNFW+ PFYFWAYFIGANS W+ IP+LIA RSW K CAA + K
Sbjct: 1 GCIVYFTTAYLDGFNFWISPFYFWAYFIGANSSWVVIPLLIARRSWNKICAAVHQSEKVK 180
Query: 748 TK*KLSLA 771
TK* L LA
Sbjct: 181 TK*FLQLA 204
>gb|BM444900.1|BM444900 EBem09_SQ006_N12_R embryo, 1 Day germination, no treatment, cv
Optic, EBem09 Hordeum vulgare subsp. vulgare cDNA clone
EBem09_SQ006_N12 5', mRNA sequence
Length = 297
Score = 122 bits (261), Expect = 3e-027
Identities = 47/67 (70%), Positives = 52/67 (77%)
Frame = +1 / +1
Query: 571 CLVYFITAYLDGFNFWVGPFYFWAYFIGANSFWIWIPMLIAIRSWKKTCAAFQAEKVKKT 750
C+VYF TAYLDGFNFW+ PFYFWAYFIGANS W+ IP+LIA RSW K CAA + KT
Sbjct: 1 CIVYFTTAYLDGFNFWISPFYFWAYFIGANSSWVVIPLLIARRSWNKICAAVHQSEKVKT 180
Query: 751 K*KLSLA 771
K* L LA
Sbjct: 181 K*FLQLA 201
>gb|BQ760373.1|BQ760373 EBro01_SQ002_E24_R root, 3 week, hydroponic grown, no treatment, cv
Optic, EBro01 Hordeum vulgare subsp. vulgare cDNA clone
EBro01_SQ002_E24 5', mRNA sequence
Length = 278
Score = 104 bits (222), Expect = 7e-022
Identities = 40/57 (70%), Positives = 48/57 (84%)
Frame = +1 / +1
Query: 115 HPYAPAELDLPGFVPLKLSQVEILVSYLGASVFVFLAVWLVSGRCVRLSKTDRLLMC 285
HPY PA LDLPG+VPL+L+Q+EIL +YLG S+ V AVWL+SGRC RLS+ DRLLMC
Sbjct: 106 HPYVPASLDLPGYVPLRLTQLEILAAYLGTSLLVVAAVWLLSGRCRRLSRADRLLMC 276
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 392,068,215
Number of Sequences: 312970
Number of extensions: 5951038
Number of successful extensions: 55655
Number of sequences better than 1.0e-020: 33
length of database: 58,378,179
effective HSP length: 52
effective length of database: 42,103,739
effective search space used: 10399623533
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)