TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= C4H2
(1794 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BE558391.1|BE558391 HV_CEb0017H19f Hordeum vulgare seedl... 456 e-146
gb|CA025894.1|CA025894 HZ53H05r HZ Hordeum vulgare subsp. v... 426 e-118
gb|AL504109.1|AL504109 AL504109 Hordeum vulgare Barke roots... 376 e-103
gb|BQ470705.1|BQ470705 HX03M12r HX Hordeum vulgare subsp. v... 266 e-102
gb|AL504406.1|AL504406 AL504406 Hordeum vulgare Barke roots... 225 2e-099
gb|BQ664209.1|BQ664209 HV02F12u HV Hordeum vulgare subsp. v... 274 4e-095
gb|BG367496.1|BG367496 HVSMEi0012H14f Hordeum vulgare 20 DA... 210 4e-093
gb|BF620285.2|BF620285 HVSMEc0019F06f Hordeum vulgare seedl... 322 3e-087
gb|AL504527.1|AL504527 AL504527 Hordeum vulgare Barke roots... 182 7e-087
gb|BF260290.3|BF260290 HVSMEf0021J18f Hordeum vulgare seedl... 262 7e-086
gb|AV917422.1|AV917422 AV917422 K. Sato unpublished cDNA li... 182 4e-085
gb|AL505149.1|AL505149 AL505149 Hordeum vulgare Barke roots... 313 2e-084
gb|AV913914.1|AV913914 AV913914 K. Sato unpublished cDNA li... 259 4e-084
gb|BE519761.3|BE519761 HV_CEb0021C04f Hordeum vulgare seedl... 270 1e-083
gb|BJ463086.1|BJ463086 BJ463086 K. Sato unpublished cDNA li... 178 2e-079
gb|CA026572.1|CA026572 HZ56E18r HZ Hordeum vulgare subsp. v... 292 3e-078
gb|BF258169.3|BF258169 HVSMEf0014P23f Hordeum vulgare seedl... 181 3e-077
gb|BE216506.2|BE216506 HV_CEb0010K21f Hordeum vulgare seedl... 285 5e-076
gb|CA026832.1|CA026832 HZ57B14r HZ Hordeum vulgare subsp. v... 281 8e-075
gb|BG308974.1|BG308974 HVSMEc0001C17f Hordeum vulgare seedl... 256 6e-074
gb|BI955765.1|BI955765 HVSMEm0024G17f Hordeum vulgare green... 264 2e-071
gb|BM817083.1|BM817083 HC01F04_T3.ab1 HC Hordeum vulgare su... 227 8e-070
gb|BQ758724.1|BQ758724 EBma07_SQ002_J15_R maternal, 21 DPA,... 264 8e-070
gb|BF253423.2|BF253423 HVSMEf0001G03f Hordeum vulgare seedl... 264 1e-069
gb|BI779253.2|BI779253 EBro01_SQ003_H11_R root, 3 week, hyd... 259 3e-068
gb|BF257476.2|BF257476 HVSMEf0013A08f Hordeum vulgare seedl... 155 1e-066
gb|BI778834.2|BI778834 EBro01_SQ001_L02_R root, 3 week, hyd... 248 5e-065
gb|BI960006.1|BI960006 HVSMEn0022N09f Hordeum vulgare rachi... 246 3e-064
gb|CA025677.1|CA025677 HZ52M20r HZ Hordeum vulgare subsp. v... 246 3e-064
gb|BQ471406.1|BQ471406 HV02F12r HV Hordeum vulgare subsp. v... 239 4e-062
gb|BF257700.2|BF257700 HVSMEf0013K04f Hordeum vulgare seedl... 168 8e-061
gb|BE215541.1|BE215541 HV_CEb0008B12f Hordeum vulgare seedl... 230 2e-059
gb|BQ767330.1|BQ767330 EBro08_SQ008_H18_R root, 3 week, dro... 228 6e-059
gb|BF261377.2|BF261377 HV_CEa0001C01f Hordeum vulgare seedl... 226 3e-058
gb|BG300103.1|BG300103 HVSMEb0011H20f Hordeum vulgare seedl... 218 6e-057
gb|BF261518.2|BF261518 HV_CEa0001H23f Hordeum vulgare seedl... 221 1e-056
gb|CA023650.1|CA023650 HZ46P09r HZ Hordeum vulgare subsp. v... 218 9e-056
gb|BF253649.2|BF253649 HVSMEf0001L18f Hordeum vulgare seedl... 215 4e-055
gb|AV921527.1|AV921527 AV921527 K. Sato unpublished cDNA li... 213 3e-054
gb|AV922603.1|AV922603 AV922603 K. Sato unpublished cDNA li... 213 3e-054
gb|AJ436646.1|AJ436646 AJ436646 S00002 Hordeum vulgare subs... 209 4e-053
gb|BJ465891.1|BJ465891 BJ465891 K. Sato unpublished cDNA li... 206 3e-052
gb|BJ467535.1|BJ467535 BJ467535 K. Sato unpublished cDNA li... 206 3e-052
gb|BQ471910.1|BQ471910 HV03N12r HV Hordeum vulgare subsp. v... 202 6e-051
gb|BI777730.2|BI777730 EBro08_SQ001_K12_R root, 3 week, dro... 191 9e-048
gb|BF618363.2|BF618363 HVSMEc0005H12f Hordeum vulgare seedl... 171 3e-046
gb|BI959752.1|BI959752 HVSMEn0021E03f Hordeum vulgare rachi... 185 8e-046
gb|AJ435273.1|AJ435273 AJ435273 S00002 Hordeum vulgare subs... 179 3e-044
gb|BE216787.2|BE216787 HV_CEb0011J09f Hordeum vulgare seedl... 174 1e-042
gb|AU252323.1|AU252323 AU252323 salt-stressed barley root c... 174 2e-042
gb|BM370693.2|BM370693 EBro04_SQ001_N15_R root, 3 week, sal... 161 8e-039
gb|BQ665478.1|BQ665478 HX03M12u HX Hordeum vulgare subsp. v... 160 2e-038
gb|BG415142.2|BG415142 HVSMEk0005E23f Hordeum vulgare testa... 141 4e-038
gb|BQ458589.1|BQ458589 HA04M20r HA Hordeum vulgare subsp. v... 99 8e-038
gb|BM370681.2|BM370681 EBro04_SQ001_M14_R root, 3 week, sal... 155 1e-036
gb|BU973663.1|BU973663 HB25J24r BC Hordeum vulgare subsp. v... 148 8e-035
gb|BF253422.2|BF253422 HVSMEf0001G02f Hordeum vulgare seedl... 145 8e-035
gb|BQ762245.1|BQ762245 EBro01_SQ005_B10_R root, 3 week, hyd... 146 4e-034
gb|BI776301.2|BI776301 EBem04_SQ001_H10_R embryo, 12 DPA, n... 144 1e-033
emb|AJ234782.1|HVU234782 Hordeum vulgare genomic DNA fragme... 140 3e-032
gb|AY989887.1| Hordeum vulgare subsp. vulgare cytochrome P4... 84 1e-031
emb|AJ495774.1|HVU495774 Hordeum vulgare partial mRNA for p... 83 2e-031
gb|BG345061.2|BG345061 HVSMEg0018H23f Hordeum vulgare pre-a... 135 8e-031
gb|BQ767241.1|BQ767241 EBro08_SQ008_I11_R root, 3 week, dro... 135 8e-031
gb|BJ465823.1|BJ465823 BJ465823 K. Sato unpublished cDNA li... 131 1e-029
gb|AL502425.1|AL502425 AL502425 Hordeum vulgare Barke roots... 131 1e-029
gb|BI960513.1|BI960513 HVSMEn0024N22f Hordeum vulgare rachi... 105 2e-028
gb|BQ764131.1|BQ764131 EBro03_SQ006_I11_R root, 3 week, wat... 122 4e-027
gb|BJ545191.1|BJ545191 BJ545191 K. Sato unpublished cDNA li... 104 5e-027
gb|BI958239.1|BI958239 HVSMEn0014A11f Hordeum vulgare rachi... 122 6e-027
gb|BF628382.2|BF628382 HVSMEb0003O04f Hordeum vulgare seedl... 122 8e-027
gb|BI956493.1|BI956493 HVSMEn0003M04f Hordeum vulgare rachi... 119 4e-026
gb|BQ471267.1|BQ471267 HV01P03T HV Hordeum vulgare subsp. v... 100 2e-025
gb|BJ466813.1|BJ466813 BJ466813 K. Sato unpublished cDNA li... 99 4e-025
gb|AV919454.1|AV919454 AV919454 K. Sato unpublished cDNA li... 99 4e-025
gb|AV917230.1|AV917230 AV917230 K. Sato unpublished cDNA li... 99 4e-025
gb|BJ464883.1|BJ464883 BJ464883 K. Sato unpublished cDNA li... 99 4e-025
gb|AJ433404.1|AJ433404 AJ433404 S00002 Hordeum vulgare subs... 109 4e-025
gb|BE519743.1|BE519743 HV_CEb0021A21f Hordeum vulgare seedl... 78 8e-025
gb|BF256412.2|BF256412 HVSMEf0009I22f Hordeum vulgare seedl... 93 1e-024
gb|BF624750.2|BF624750 HVSMEa0017K07f Hordeum vulgare seedl... 110 1e-024
gb|BJ546119.1|BJ546119 BJ546119 K. Sato unpublished cDNA li... 87 1e-024
gb|BJ546501.1|BJ546501 BJ546501 K. Sato unpublished cDNA li... 87 1e-024
gb|BJ463386.1|BJ463386 BJ463386 K. Sato unpublished cDNA li... 100 1e-024
gb|BF629412.3|BF629412 HVSMEb0012D18f Hordeum vulgare seedl... 100 1e-024
gb|BF628981.3|BF628981 HVSMEb0009G20f Hordeum vulgare seedl... 114 2e-024
gb|AV921112.1|AV921112 AV921112 K. Sato unpublished cDNA li... 87 2e-024
gb|BU999462.1|BU999462 HI14J11r HI Hordeum vulgare subsp. v... 100 3e-024
gb|AV936726.1|AV936726 AV936726 K. Sato unpublished cDNA li... 84 5e-024
gb|AV936516.1|AV936516 AV936516 K. Sato unpublished cDNA li... 84 5e-024
gb|BJ548975.1|BJ548975 BJ548975 K. Sato unpublished cDNA li... 84 5e-024
gb|BJ548006.1|BJ548006 BJ548006 K. Sato unpublished cDNA li... 84 5e-024
gb|AV936356.1|AV936356 AV936356 K. Sato unpublished cDNA li... 84 5e-024
gb|BJ547960.1|BJ547960 BJ547960 K. Sato unpublished cDNA li... 84 5e-024
gb|BJ548998.1|BJ548998 BJ548998 K. Sato unpublished cDNA li... 84 5e-024
gb|AV936349.1|AV936349 AV936349 K. Sato unpublished cDNA li... 84 5e-024
gb|BJ548386.1|BJ548386 BJ548386 K. Sato unpublished cDNA li... 84 5e-024
gb|AV930421.1|AV930421 AV930421 K. Sato unpublished cDNA li... 84 5e-024
gb|AV935198.1|AV935198 AV935198 K. Sato unpublished cDNA li... 84 5e-024
gb|BJ544646.1|BJ544646 BJ544646 K. Sato unpublished cDNA li... 87 9e-024
gb|BJ545019.1|BJ545019 BJ545019 K. Sato unpublished cDNA li... 87 9e-024
gb|BE215637.1|BE215637 HV_CEb0007H18f Hordeum vulgare seedl... 95 1e-023
gb|BF628635.2|BF628635 HVSMEb0006N15f Hordeum vulgare seedl... 90 2e-023
gb|BJ453643.1|BJ453643 BJ453643 K. Sato unpublished cDNA li... 86 4e-023
gb|BJ452936.1|BJ452936 BJ452936 K. Sato unpublished cDNA li... 86 4e-023
gb|BJ466861.1|BJ466861 BJ466861 K. Sato unpublished cDNA li... 84 6e-023
gb|AV919647.1|AV919647 AV919647 K. Sato unpublished cDNA li... 84 6e-023
gb|AV913934.1|AV913934 AV913934 K. Sato unpublished cDNA li... 84 6e-023
gb|AV918301.1|AV918301 AV918301 K. Sato unpublished cDNA li... 84 6e-023
gb|AV918176.1|AV918176 AV918176 K. Sato unpublished cDNA li... 84 6e-023
gb|AV922405.1|AV922405 AV922405 K. Sato unpublished cDNA li... 84 6e-023
gb|CA030582.1|CA030582 HX07H18r HX Hordeum vulgare subsp. v... 74 1e-022
gb|AL500947.1|AL500947 AL500947 Hordeum vulgare Barke roots... 107 2e-022
gb|BJ546669.1|BJ546669 BJ546669 K. Sato unpublished cDNA li... 85 3e-022
gb|AY551434.1| Hordeum vulgare subsp. vulgare ent-kaurene o... 65 6e-022
gb|AV915997.1|AV915997 AV915997 K. Sato unpublished cDNA li... 87 7e-022
gb|AV916927.1|AV916927 AV916927 K. Sato unpublished cDNA li... 84 7e-022
gb|AL501446.1|AL501446 AL501446 Hordeum vulgare Barke roots... 89 7e-022
gb|BJ465003.1|BJ465003 BJ465003 K. Sato unpublished cDNA li... 78 1e-021
gb|BU968861.1|BU968861 HB08M23r BC Hordeum vulgare subsp. v... 90 1e-021
gb|BJ549009.1|BJ549009 BJ549009 K. Sato unpublished cDNA li... 76 1e-021
gb|AV917596.1|AV917596 AV917596 K. Sato unpublished cDNA li... 52 2e-021
gb|BF254550.2|BF254550 HVSMEf0004F12f Hordeum vulgare seedl... 103 3e-021
gb|BM816874.1|BM816874 HB105E09_SK.ab1 HB Hordeum vulgare s... 76 5e-021
gb|BG416486.2|BG416486 HVSMEk0012I14f Hordeum vulgare testa... 102 5e-021
gb|BI960706.1|BI960706 HVSMEn0001B07f Hordeum vulgare rachi... 101 1e-020
gb|AV912967.1|AV912967 AV912967 K. Sato unpublished cDNA li... 80 2e-020
gb|BI948978.1|BI948978 HVSMEl0011O14f Hordeum vulgare spike... 100 3e-020
gb|AV927306.1|AV927306 AV927306 K. Sato unpublished cDNA li... 73 3e-020
gb|CA019349.1|CA019349 HV11L11r HV Hordeum vulgare subsp. v... 100 5e-020
gb|CA028447.1|CA028447 HZ61P23r HZ Hordeum vulgare subsp. v... 100 5e-020
emb|AJ234781.1|HVU234781 Hordeum vulgare genomic DNA fragme... 100 5e-020
gb|AJ463481.1|AJ463481 AJ463481 S00002 Hordeum vulgare subs... 99 7e-020
gb|BQ656344.1|BQ656344 HA04M20u HA Hordeum vulgare subsp. v... 99 7e-020
gb|AL501837.1|AL501837 AL501837 Hordeum vulgare Barke roots... 98 1e-019
gb|BI957225.1|BI957225 HVSMEn0008D16f Hordeum vulgare rachi... 98 1e-019
gb|AV912854.1|AV912854 AV912854 K. Sato unpublished cDNA li... 98 1e-019
gb|AV922397.1|AV922397 AV922397 K. Sato unpublished cDNA li... 80 1e-019
gb|BJ466913.1|BJ466913 BJ466913 K. Sato unpublished cDNA li... 80 1e-019
gb|AV914567.1|AV914567 AV914567 K. Sato unpublished cDNA li... 84 2e-019
gb|CA013705.1|CA013705 HT09E03r HT Hordeum vulgare subsp. v... 65 2e-019
gb|AV920965.1|AV920965 AV920965 K. Sato unpublished cDNA li... 69 5e-019
gb|AV934098.1|AV934098 AV934098 K. Sato unpublished cDNA li... 84 7e-019
gb|CA020031.1|CA020031 HV14C06r HV Hordeum vulgare subsp. v... 95 8e-019
gb|CB880227.1|CB880227 HM05O04w HM Hordeum vulgare subsp. v... 77 2e-018
gb|AV918446.1|AV918446 AV918446 K. Sato unpublished cDNA li... 73 2e-018
gb|BF631513.2|BF631513 HVSMEb0016D19f Hordeum vulgare seedl... 93 4e-018
gb|BE216646.1|BE216646 HV_CEb0011B08f Hordeum vulgare seedl... 48 6e-018
gb|BJ460485.1|BJ460485 BJ460485 K. Sato unpublished cDNA li... 76 9e-018
gb|BF627303.3|BF627303 HVSMEb0004I01f Hordeum vulgare seedl... 73 1e-017
gb|BE213800.1|BE213800 HV_CEb0001F01f Hordeum vulgare seedl... 84 2e-017
gb|CV056681.1|CV056681 BNEL1E1 Barley EST endosperm library... 65 2e-017
gb|AU252315.1|AU252315 AU252315 salt-stressed barley root c... 71 2e-017
gb|AV913057.1|AV913057 AV913057 K. Sato unpublished cDNA li... 90 3e-017
gb|AV919240.1|AV919240 AV919240 K. Sato unpublished cDNA li... 72 3e-017
gb|AV922497.1|AV922497 AV922497 K. Sato unpublished cDNA li... 72 3e-017
gb|BQ767980.1|BQ767980 EBro08_SQ010_I12_R root, 3 week, dro... 90 4e-017
gb|BF259778.3|BF259778 HVSMEf0020D20f Hordeum vulgare seedl... 69 4e-017
gb|CV060077.1|CV060077 BNEL54b3 Barley EST endosperm librar... 64 4e-017
gb|BE195199.3|BE195199 HVSMEh0088J02f Hordeum vulgare 5-45 ... 57 6e-017
gb|AV919113.1|AV919113 AV919113 K. Sato unpublished cDNA li... 70 1e-016
gb|AV917809.1|AV917809 AV917809 K. Sato unpublished cDNA li... 70 1e-016
gb|AV918673.1|AV918673 AV918673 K. Sato unpublished cDNA li... 61 1e-016
gb|AV913374.1|AV913374 AV913374 K. Sato unpublished cDNA li... 61 1e-016
gb|BM100938.2|BM100938 EBpi01_SQ002_G18_R pistil, 1 DPA, no... 65 1e-016
gb|CA009631.1|CA009631 HU14K18r HU Hordeum vulgare subsp. v... 50 2e-016
gb|BJ463196.1|BJ463196 BJ463196 K. Sato unpublished cDNA li... 87 3e-016
gb|BG301188.1|BG301188 HVSMEb0019N18f Hordeum vulgare seedl... 76 3e-016
gb|BU995653.1|BU995653 HM10O21r HM Hordeum vulgare subsp. v... 86 5e-016
gb|BI959145.1|BI959145 HVSMEn0018G02f Hordeum vulgare rachi... 62 5e-016
gb|AV916579.1|AV916579 AV916579 K. Sato unpublished cDNA li... 51 5e-016
gb|CA012057.1|CA012057 HT04F04r HT Hordeum vulgare subsp. v... 72 7e-016
gb|AV934105.1|AV934105 AV934105 K. Sato unpublished cDNA li... 84 2e-015
gb|BF262413.2|BF262413 HV_CEa0004D05f Hordeum vulgare seedl... 84 3e-015
gb|BJ464184.1|BJ464184 BJ464184 K. Sato unpublished cDNA li... 84 3e-015
gb|BF630963.2|BF630963 HVSMEb0014J02f Hordeum vulgare seedl... 83 4e-015
gb|BG367227.1|BG367227 HVSMEi0011F22f Hordeum vulgare 20 DA... 83 4e-015
gb|AV931728.1|AV931728 AV931728 K. Sato unpublished cDNA li... 60 4e-015
gb|AV836496.1|AV836496 AV836496 K. Sato unpublished cDNA li... 82 8e-015
gb|AV929028.1|AV929028 AV929028 K. Sato unpublished cDNA li... 82 8e-015
gb|BE519751.1|BE519751 HV_CEb0021B09f Hordeum vulgare seedl... 82 1e-014
gb|BM443441.2|BM443441 EBro02_SQ005_C13_R root, 3 week, hyd... 82 1e-014
gb|BF257896.3|BF257896 HVSMEf0014C17f Hordeum vulgare seedl... 60 2e-014
gb|BE558465.1|BE558465 HV_CEb0017M13f Hordeum vulgare seedl... 81 2e-014
gb|CA017637.1|CA017637 HV05M12r HV Hordeum vulgare subsp. v... 81 2e-014
gb|CA005397.1|CA005397 HU10K20u HU Hordeum vulgare subsp. v... 51 3e-014
gb|BF260074.2|BF260074 HVSMEf0021A16f Hordeum vulgare seedl... 80 4e-014
gb|AU252309.1|AU252309 AU252309 salt-stressed barley root c... 80 4e-014
gb|AJ434580.1|AJ434580 AJ434580 S00002 Hordeum vulgare subs... 63 5e-014
gb|BJ475646.1|BJ475646 BJ475646 K. Sato unpublished cDNA li... 62 7e-014
gb|CA018489.1|CA018489 HV08M10r HV Hordeum vulgare subsp. v... 79 8e-014
gb|BQ763910.1|BQ763910 EBro03_SQ005_A24_R root, 3 week, wat... 79 1e-013
gb|BE559455.1|BE559455 HV_CEb0024M12f Hordeum vulgare seedl... 78 2e-013
gb|BJ547149.1|BJ547149 BJ547149 K. Sato unpublished cDNA li... 78 2e-013
gb|BM371202.2|BM371202 EBro04_SQ003_N08_R root, 3 week, sal... 77 3e-013
gb|AL504160.1|AL504160 AL504160 Hordeum vulgare Barke roots... 44 4e-013
gb|AL503971.1|AL503971 AL503971 Hordeum vulgare Barke roots... 76 5e-013
gb|CV063618.1|CV063618 BNEL91c9 Barley EST endosperm librar... 65 9e-013
gb|BF263362.2|BF263362 HV_CEa0006I19f Hordeum vulgare seedl... 75 1e-012
gb|AV917238.1|AV917238 AV917238 K. Sato unpublished cDNA li... 75 1e-012
gb|BU995588.1|BU995588 HM10L15r HM Hordeum vulgare subsp. v... 75 1e-012
gb|BF255383.2|BF255383 HVSMEf0006L09f Hordeum vulgare seedl... 74 2e-012
gb|AV926418.1|AV926418 AV926418 K. Sato unpublished cDNA li... 74 3e-012
gb|BF065379.1|BF065379 HV_CEb0012E10f Hordeum vulgare seedl... 69 3e-012
gb|AV917240.1|AV917240 AV917240 K. Sato unpublished cDNA li... 55 4e-012
gb|AV922407.1|AV922407 AV922407 K. Sato unpublished cDNA li... 55 4e-012
gb|BE214490.1|BE214490 HV_CEb0003J19f Hordeum vulgare seedl... 73 5e-012
gb|AV928038.1|AV928038 AV928038 K. Sato unpublished cDNA li... 55 8e-012
gb|AV917724.1|AV917724 AV917724 K. Sato unpublished cDNA li... 54 8e-012
gb|CA009374.1|CA009374 HU13P05r HU Hordeum vulgare subsp. v... 38 9e-012
gb|BJ466231.1|BJ466231 BJ466231 K. Sato unpublished cDNA li... 53 1e-011
gb|BE420941.1|BE420941 HWM004.B06 ITEC HWM Barley Leaf Libr... 72 1e-011
gb|BI950331.1|BI950331 HVSMEl0020E12f Hordeum vulgare spike... 72 1e-011
gb|BM098719.2|BM098719 EBem08_SQ003_O03_R embryo, 40 DPA, n... 71 2e-011
gb|CA016903.1|CA016903 HV05M12u HV Hordeum vulgare subsp. v... 41 2e-011
gb|BE420993.1|BE420993 HWM004.F10 ITEC HWM Barley Leaf Libr... 70 3e-011
gb|BJ464493.1|BJ464493 BJ464493 K. Sato unpublished cDNA li... 70 4e-011
gb|BE196002.1|BE196002 HVSMEh0091B12f Hordeum vulgare 5-45 ... 69 6e-011
gb|BI952693.1|BI952693 HVSMEm0007G18f Hordeum vulgare green... 69 6e-011
gb|AV836678.1|AV836678 AV836678 K. Sato unpublished cDNA li... 69 8e-011
gb|BF627063.2|BF627063 HVSMEb0002G10f Hordeum vulgare seedl... 69 8e-011
gb|BF261803.3|BF261803 HV_CEa0002E08f Hordeum vulgare seedl... 69 8e-011
gb|BJ471507.1|BJ471507 BJ471507 K. Sato unpublished cDNA li... 68 1e-010
gb|BG299722.1|BG299722 HVSMEa0021I20f Hordeum vulgare seedl... 68 2e-010
gb|BF627742.1|BF627742 HVSMEb0005K21f Hordeum vulgare seedl... 68 2e-010
gb|BE195103.3|BE195103 HVSMEh0088E21f Hordeum vulgare 5-45 ... 68 2e-010
gb|BJ452702.1|BJ452702 BJ452702 K. Sato unpublished cDNA li... 68 2e-010
gb|BQ664118.1|BQ664118 HV01P03w HV Hordeum vulgare subsp. v... 49 2e-010
gb|CA012725.1|CA012725 HT06E05r HT Hordeum vulgare subsp. v... 37 3e-010
gb|CA020248.1|CA020248 HV14M03r HV Hordeum vulgare subsp. v... 67 4e-010
gb|BG301073.1|BG301073 HVSMEb0019H09f Hordeum vulgare seedl... 66 6e-010
gb|BE196643.3|BE196643 HVSMEh0092N21f Hordeum vulgare 5-45 ... 62 6e-010
gb|BF066135.3|BF066135 HV_CEb0014P04f Hordeum vulgare seedl... 51 8e-010
gb|AV918924.1|AV918924 AV918924 K. Sato unpublished cDNA li... 47 8e-010
gb|BJ465805.1|BJ465805 BJ465805 K. Sato unpublished cDNA li... 47 8e-010
gb|CA017939.1|CA017939 HV06O02r HV Hordeum vulgare subsp. v... 65 1e-009
gb|BG344914.2|BG344914 HVSMEg0016N10f Hordeum vulgare pre-a... 65 1e-009
gb|BQ763851.1|BQ763851 EBro03_SQ005_G18_R root, 3 week, wat... 61 1e-009
gb|BF621561.1|BF621561 HVSMEa0011G21f Hordeum vulgare seedl... 64 2e-009
gb|BF623074.2|BF623074 HVSMEa0014B04f Hordeum vulgare seedl... 64 2e-009
gb|BG299547.1|BG299547 HVSMEa0020L03f Hordeum vulgare seedl... 64 2e-009
gb|BG299744.1|BG299744 HVSMEa0021K06f Hordeum vulgare seedl... 64 2e-009
gb|BF618151.2|BF618151 HVSMEc0004L02f Hordeum vulgare seedl... 64 2e-009
gb|AV923778.1|AV923778 AV923778 K. Sato unpublished cDNA li... 64 2e-009
gb|CA019109.1|CA019109 HV10M21r HV Hordeum vulgare subsp. v... 64 2e-009
gb|BG365432.1|BG365432 HVSMEi0002K17f Hordeum vulgare 20 DA... 51 2e-009
gb|AU252316.1|AU252316 AU252316 salt-stressed barley root c... 46 2e-009
gb|CA018612.1|CA018612 HV09C09r HV Hordeum vulgare subsp. v... 45 2e-009
gb|BF623024.2|BF623024 HVSMEa0012K14f Hordeum vulgare seedl... 64 3e-009
gb|BE193332.3|BE193332 HVSMEh0080J21f Hordeum vulgare 5-45 ... 64 3e-009
gb|CV058216.1|CV058216 BNEL35f11 Barley EST endosperm libra... 64 3e-009
gb|AL506858.1|AL506858 AL506858 Hordeum vulgare Barke devel... 63 4e-009
gb|BQ471950.1|BQ471950 HV03P12r HV Hordeum vulgare subsp. v... 63 4e-009
gb|BM101180.2|BM101180 EBpi01_SQ003_C01_R pistil, 1 DPA, no... 45 4e-009
gb|BQ754072.1|BQ754072 EBca01_SQ002_L23_R carpel, pre-anthe... 60 4e-009
gb|AV925268.1|AV925268 AV925268 K. Sato unpublished cDNA li... 63 4e-009
gb|BQ664275.1|BQ664275 HV02K08u HV Hordeum vulgare subsp. v... 42 5e-009
gb|BG299631.1|BG299631 HVSMEa0021C22f Hordeum vulgare seedl... 63 5e-009
gb|BM816359.1|BM816359 HC107B05_SK.ab1 HC Hordeum vulgare s... 63 5e-009
gb|BM816360.1|BM816360 HC108E07_SK.ab1 HC Hordeum vulgare s... 63 5e-009
gb|BM816361.1|BM816361 HC107G12_SK.ab1 HC Hordeum vulgare s... 63 5e-009
gb|BQ662325.1|BQ662325 HS01N10w HS Hordeum vulgare subsp. v... 49 5e-009
gb|AV921548.1|AV921548 AV921548 K. Sato unpublished cDNA li... 46 7e-009
gb|BI959046.1|BI959046 HVSMEn0017O11f Hordeum vulgare rachi... 62 1e-008
gb|CV057694.1|CV057694 BNEL2F9 Barley EST endosperm library... 62 1e-008
gb|BE230990.2|BE230990 HVSMEg0015H12f Hordeum vulgare pre-a... 42 1e-008
gb|BJ461185.1|BJ461185 BJ461185 K. Sato unpublished cDNA li... 46 1e-008
gb|BQ471507.1|BQ471507 HV02K08r HV Hordeum vulgare subsp. v... 62 1e-008
gb|BF259330.2|BF259330 HVSMEf0019E22f Hordeum vulgare seedl... 61 2e-008
gb|BF621128.2|BF621128 HVSMEa0004D22f Hordeum vulgare seedl... 49 2e-008
gb|BJ547848.1|BJ547848 BJ547848 K. Sato unpublished cDNA li... 60 5e-008
gb|AV918105.1|AV918105 AV918105 K. Sato unpublished cDNA li... 39 6e-008
gb|CA018816.1|CA018816 HV09M01r HV Hordeum vulgare subsp. v... 59 7e-008
gb|CV053965.1|CV053965 BNEL105b9 Barley EST endosperm libra... 59 7e-008
gb|CV058206.1|CV058206 BNEL35e2 Barley EST endosperm librar... 59 7e-008
gb|CV064063.1|CV064063 BNEL97a10 Barley EST endosperm libra... 59 7e-008
gb|BU989362.1|BU989362 HF21I13r HF Hordeum vulgare subsp. v... 42 7e-008
gb|AV932347.1|AV932347 AV932347 K. Sato unpublished cDNA li... 59 9e-008
gb|AV934261.1|AV934261 AV934261 K. Sato unpublished cDNA li... 59 9e-008
gb|AV925764.1|AV925764 AV925764 K. Sato unpublished cDNA li... 58 2e-007
gb|BU969784.1|BU969784 HB12I20r BC Hordeum vulgare subsp. v... 58 2e-007
gb|BF253916.1|BF253916 HVSMEf0002H19f Hordeum vulgare seedl... 41 2e-007
gb|AU252324.1|AU252324 AU252324 salt-stressed barley root c... 57 3e-007
gb|BF627396.2|BF627396 HVSMEb0004L24f Hordeum vulgare seedl... 57 4e-007
gb|BG300331.1|BG300331 HVSMEb0012I19f Hordeum vulgare seedl... 57 4e-007
gb|BF620467.2|BF620467 HVSMEc0019P16f Hordeum vulgare seedl... 57 4e-007
gb|AU252310.1|AU252310 AU252310 salt-stressed barley root c... 57 4e-007
gb|CA006248.1|CA006248 HU14K18u HU Hordeum vulgare subsp. v... 45 5e-007
gb|BF624797.2|BF624797 HVSMEa0017M08f Hordeum vulgare seedl... 56 6e-007
gb|CV060824.1|CV060824 BNEL61f2 Barley EST endosperm librar... 56 6e-007
gb|BF630651.1|BF630651 HVSMEb0012K10f Hordeum vulgare seedl... 55 1e-006
gb|BF259628.2|BF259628 HVSMEf0019N09f Hordeum vulgare seedl... 45 1e-006
gb|AV931303.1|AV931303 AV931303 K. Sato unpublished cDNA li... 55 2e-006
gb|BQ467162.1|BQ467162 HS02N10r HS Hordeum vulgare subsp. v... 49 2e-006
gb|BF268094.2|BF268094 HV_CEa0019N15f Hordeum vulgare seedl... 54 2e-006
gb|BF620090.3|BF620090 HVSMEc0011N15f Hordeum vulgare seedl... 54 3e-006
gb|BQ471556.1|BQ471556 HV02M13r HV Hordeum vulgare subsp. v... 54 3e-006
gb|BF255745.3|BF255745 HVSMEf0007L02f Hordeum vulgare seedl... 44 7e-006
gb|BI947369.1|BI947369 HVSMEl0005E10f Hordeum vulgare spike... 43 8e-006
gb|BI958715.1|BI958715 HVSMEn0016F08f Hordeum vulgare rachi... 40 9e-006
gb|AV929029.1|AV929029 AV929029 K. Sato unpublished cDNA li... 51 2e-005
gb|AL507809.1|AL507809 AL507809 Hordeum vulgare Barke devel... 50 2e-005
gb|BF618536.3|BF618536 HVSMEc0005P14f Hordeum vulgare seedl... 41 2e-005
gb|BI959183.1|BI959183 HVSMEn0018I13f Hordeum vulgare rachi... 51 3e-005
gb|BI959436.1|BI959436 HVSMEn0019K16f Hordeum vulgare rachi... 51 3e-005
gb|AL504503.1|AL504503 AL504503 Hordeum vulgare Barke roots... 36 3e-005
gb|BQ740043.1|BQ740043 HC04A05 HC Hordeum vulgare subsp. vu... 50 4e-005
gb|BQ740201.1|BQ740201 HC112D01 HC Hordeum vulgare subsp. v... 50 4e-005
gb|BG308954.1|BG308954 HVSMEc0001A19f Hordeum vulgare seedl... 45 4e-005
gb|BF618482.2|BF618482 HVSMEc0005N02f Hordeum vulgare seedl... 40 4e-005
gb|BI956821.1|BI956821 HVSMEn0005I03f Hordeum vulgare rachi... 50 5e-005
gb|AV930901.1|AV930901 AV930901 K. Sato unpublished cDNA li... 49 7e-005
gb|BM443957.2|BM443957 EBem09_SQ002_E09_R embryo, 1 Day ger... 49 7e-005
gb|BJ464550.1|BJ464550 BJ464550 K. Sato unpublished cDNA li... 49 1e-004
gb|BI952928.1|BI952928 HVSMEm0008H17f Hordeum vulgare green... 44 1e-004
gb|BI958225.1|BI958225 HVSMEn0013P10f Hordeum vulgare rachi... 48 1e-004
gb|AV922276.1|AV922276 AV922276 K. Sato unpublished cDNA li... 48 2e-004
gb|BE214174.2|BE214174 HV_CEb0002I14f Hordeum vulgare seedl... 33 3e-004
gb|AV920535.1|AV920535 AV920535 K. Sato unpublished cDNA li... 37 3e-004
gb|BI957238.1|BI957238 HVSMEn0008F03f Hordeum vulgare rachi... 47 3e-004
gb|BI959231.1|BI959231 HVSMEn0018M11f Hordeum vulgare rachi... 47 3e-004
gb|AL506653.1|AL506653 AL506653 Hordeum vulgare Barke devel... 46 4e-004
gb|BE411284.1|BE411284 ISC004.A02F990510 ITEC ISC Barley Le... 46 5e-004
gb|BJ469892.1|BJ469892 BJ469892 K. Sato unpublished cDNA li... 46 5e-004
gb|BQ766377.1|BQ766377 EBro08_SQ005_G19_R root, 3 week, dro... 41 6e-004
gb|BE519835.1|BE519835 HV_CEb0021G12f Hordeum vulgare seedl... 46 7e-004
gb|BG301293.2|BG301293 HVSMEb0020I08f Hordeum vulgare seedl... 46 7e-004
gb|BE195847.3|BE195847 HVSMEh0090K01f Hordeum vulgare 5-45 ... 46 7e-004
gb|BM816703.1|BM816703 HC114E07_SK.ab1 HC Hordeum vulgare s... 46 7e-004
gb|CA013589.1|CA013589 HT08O23r HT Hordeum vulgare subsp. v... 46 7e-004
gb|CB858927.1|CB858927 HI08L23w HI Hordeum vulgare subsp. v... 46 7e-004
gb|CA016384.1|CA016384 HV09C09u HV Hordeum vulgare subsp. v... 41 7e-004
gb|BE519842.2|BE519842 HV_CEb0021G19f Hordeum vulgare seedl... 41 9e-004
gb|BI958140.1|BI958140 HVSMEn0013J13f Hordeum vulgare rachi... 46 9e-004
gb|AV928880.1|AV928880 AV928880 K. Sato unpublished cDNA li... 46 9e-004
gb|BM096613.2|BM096613 EBem06_SQ001_A01_R embryo, 21 DPA, n... 46 9e-004
gb|CA015705.1|CA015705 HV12J09u HV Hordeum vulgare subsp. v... 46 9e-004
gb|CA017757.1|CA017757 HV06C16r HV Hordeum vulgare subsp. v... 37 0.001
gb|BG416626.2|BG416626 HVSMEk0013K23f Hordeum vulgare testa... 45 0.002
gb|BE602159.2|BE602159 HVSMEh0102M13f Hordeum vulgare 5-45 ... 44 0.002
gb|BF629973.3|BF629973 HVSMEb0007I04f Hordeum vulgare seedl... 44 0.002
gb|CA019622.1|CA019622 HV12J09r HV Hordeum vulgare subsp. v... 44 0.002
gb|BI959293.1|BI959293 HVSMEn0019C04f Hordeum vulgare rachi... 35 0.002
gb|BF624213.1|BF624213 HVSMEa0012L22f Hordeum vulgare seedl... 37 0.003
gb|AV915951.1|AV915951 AV915951 K. Sato unpublished cDNA li... 44 0.003
gb|BQ471971.1|BQ471971 HV04A16r HV Hordeum vulgare subsp. v... 37 0.004
gb|BQ469981.1|BQ469981 HX01G20T HX Hordeum vulgare subsp. v... 43 0.004
gb|BM374215.2|BM374215 EBma03_SQ003_P20_R maternal, 8 DPA, ... 43 0.004
gb|CA032731.1|CA032731 HX14A20r HX Hordeum vulgare subsp. v... 43 0.004
gb|CB875167.1|CB875167 HX07H18w HX Hordeum vulgare subsp. v... 43 0.004
gb|BQ465765.1|BQ465765 HU04K03r HU Hordeum vulgare subsp. v... 34 0.005
gb|BF624189.2|BF624189 HVSMEa0012H20f Hordeum vulgare seedl... 43 0.006
gb|BF257911.2|BF257911 HVSMEf0014D09f Hordeum vulgare seedl... 43 0.006
gb|BQ764639.1|BQ764639 EBca01_SQ004_O12_R carpel, pre-anthe... 43 0.006
gb|BI951511.1|BI951511 HVSMEm0001D04f Hordeum vulgare green... 36 0.007
gb|AV923987.1|AV923987 AV923987 K. Sato unpublished cDNA li... 42 0.008
gb|BQ468032.1|BQ468032 HR01L12r HR Hordeum vulgare subsp. v... 42 0.008
gb|BU996440.1|BU996440 HM13J19r HM Hordeum vulgare subsp. v... 36 0.014
gb|BI952196.1|BI952196 HVSMEm0004P09f Hordeum vulgare green... 41 0.021
gb|BE216723.1|BE216723 HV_CEb0011F15f Hordeum vulgare seedl... 41 0.021
gb|BI777671.2|BI777671 EBro08_SQ001_F03_R root, 3 week, dro... 41 0.021
gb|CB881714.1|CB881714 HM10K16w HM Hordeum vulgare subsp. v... 41 0.021
gb|AL500548.1|AL500548 AL500548 Hordeum vulgare Barke roots... 40 0.030
gb|BE559347.1|BE559347 HV_CEb0024D15f Hordeum vulgare seedl... 40 0.030
gb|BQ471837.1|BQ471837 HV03K07r HV Hordeum vulgare subsp. v... 40 0.030
gb|BI779667.2|BI779667 EBem05_SQ001_A03_R embryo, 14 DPA, n... 40 0.030
gb|AU252308.1|AU252308 AU252308 salt-stressed barley root c... 40 0.030
gb|AY641412.1| Hordeum vulgare subsp. vulgare retrotranspos... 30 0.031
gb|AV923591.1|AV923591 AV923591 K. Sato unpublished cDNA li... 40 0.041
gb|AV923592.1|AV923592 AV923592 K. Sato unpublished cDNA li... 40 0.041
gb|BQ767074.1|BQ767074 EBro08_SQ007_L20_R root, 3 week, dro... 40 0.041
gb|BU994695.1|BU994695 HM07O04r HM Hordeum vulgare subsp. v... 40 0.041
gb|AV926887.1|AV926887 AV926887 K. Sato unpublished cDNA li... 40 0.056
gb|BE060200.3|BE060200 HVSMEg0011E01f Hordeum vulgare pre-a... 39 0.077
gb|BM816704.1|BM816704 HB01G04_T3.ab1 HB Hordeum vulgare su... 39 0.077
gb|BQ466592.1|BQ466592 HT02P16r HT Hordeum vulgare subsp. v... 39 0.077
gb|CA013515.1|CA013515 HT08L06r HT Hordeum vulgare subsp. v... 39 0.077
gb|BF625788.2|BF625788 HVSMEa0013J17f Hordeum vulgare seedl... 39 0.11
gb|BI958347.1|BI958347 HVSMEn0014I13f Hordeum vulgare rachi... 39 0.11
gb|BF262442.3|BF262442 HV_CEa0003P13f Hordeum vulgare seedl... 39 0.11
gb|BU999090.1|BU999090 HI13D10r HI Hordeum vulgare subsp. v... 39 0.11
gb|BU985430.1|BU985430 HF07C22r HF Hordeum vulgare subsp. v... 31 0.11
gb|AV915851.1|AV915851 AV915851 K. Sato unpublished cDNA li... 38 0.14
gb|CB876974.1|CB876974 HP03B22T HP Hordeum vulgare subsp. v... 38 0.14
gb|AV923900.1|AV923900 AV923900 K. Sato unpublished cDNA li... 36 0.16
gb|BF621280.2|BF621280 HVSMEa0006E24f Hordeum vulgare seedl... 33 0.18
gb|BQ661909.1|BQ661909 HP01M15w HP Hordeum vulgare subsp. v... 38 0.20
gb|BQ753754.1|BQ753754 EBca01_SQ001_F09_R carpel, pre-anthe... 38 0.20
gb|CA016039.1|CA016039 HV10M21u HV Hordeum vulgare subsp. v... 38 0.20
gb|BE421487.1|BE421487 HWM009.G12 ITEC HWM Barley Leaf Libr... 37 0.27
gb|AV927784.1|AV927784 AV927784 K. Sato unpublished cDNA li... 37 0.27
gb|AV929760.1|AV929760 AV929760 K. Sato unpublished cDNA li... 37 0.27
gb|BJ467028.1|BJ467028 BJ467028 K. Sato unpublished cDNA li... 37 0.27
gb|CA015964.1|CA015964 HV11L11u HV Hordeum vulgare subsp. v... 37 0.27
gb|AY735797.1| Hordeum vulgare subsp. vulgare clone cLN4-48... 37 0.27
gb|AY735813.1| Hordeum vulgare subsp. vulgare clone cLN4-12... 37 0.27
gb|AY735821.1| Hordeum vulgare subsp. vulgare clone cLN4-44... 37 0.27
gb|BG417137.1|BG417137 HVSMEk0016H05f Hordeum vulgare testa... 36 0.30
gb|BE602105.2|BE602105 HVSMEh0102I05f Hordeum vulgare 5-45 ... 27 0.34
gb|CA002748.1|CA002748 HS08G14r HS Hordeum vulgare subsp. v... 32 0.36
gb|BE454807.2|BE454807 HVSMEh0095C01f Hordeum vulgare 5-45 ... 37 0.37
gb|BG344005.2|BG344005 HVSMEg0007F22f Hordeum vulgare pre-a... 37 0.37
gb|BQ662532.1|BQ662532 HS02N10u HS Hordeum vulgare subsp. v... 37 0.37
gb|BQ763150.1|BQ763150 EBro02_SQ007_J10 _R root, 3 week, hy... 37 0.37
gb|CA002802.1|CA002802 HS08J06r HS Hordeum vulgare subsp. v... 29 0.47
gb|BI956825.1|BI956825 HVSMEn0005I14f Hordeum vulgare rachi... 35 0.47
gb|BI956861.1|BI956861 HVSMEn0005L05f Hordeum vulgare rachi... 36 0.51
gb|CA011333.1|CA011333 HT06E05u HT Hordeum vulgare subsp. v... 36 0.51
gb|BF260951.2|BF260951 HVSMEf0023F23f Hordeum vulgare seedl... 36 0.71
gb|AV912012.1|AV912012 AV912012 K. Sato unpublished cDNA li... 36 0.71
gb|BJ460252.1|BJ460252 BJ460252 K. Sato unpublished cDNA li... 36 0.71
gb|BF630974.2|BF630974 HVSMEb0014J14f Hordeum vulgare seedl... 35 0.97
gb|BG300766.1|BG300766 HVSMEb0018F03f Hordeum vulgare seedl... 35 0.97
gb|BF257741.2|BF257741 HVSMEf0013L21f Hordeum vulgare seedl... 35 0.97
gb|BF065151.1|BF065151 HV_CEb0023I16f Hordeum vulgare seedl... 35 0.97
gb|BG368560.2|BG368560 HVSMEi0019L19f Hordeum vulgare 20 DA... 35 0.97
gb|AV919038.1|AV919038 AV919038 K. Sato unpublished cDNA li... 35 0.97
gb|BM816006.1|BM816006 HC109C12_T3.ab1 HC Hordeum vulgare s... 35 0.97
gb|BJ455787.1|BJ455787 BJ455787 K. Sato unpublished cDNA li... 35 0.97
gb|CA016358.1|CA016358 HV09D15u HV Hordeum vulgare subsp. v... 35 0.97
gb|BG365759.2|BG365759 HVSMEi0004B14f Hordeum vulgare 20 DA... 32 0.97
gb|CV055750.1|CV055750 BNEL123a8 Barley EST endosperm libra... 26 0.98
gb|AL507292.1|AL507292 AL507292 Hordeum vulgare Barke devel... 29 1.1
gb|CA004299.1|CA004299 HS17C24r HS Hordeum vulgare subsp. v... 29 1.2
gb|AV836988.1|AV836988 AV836988 K. Sato unpublished cDNA li... 35 1.3
gb|BF616628.3|BF616628 HVSMEc0010N21f Hordeum vulgare seedl... 35 1.3
gb|AV909912.1|AV909912 AV909912 K. Sato unpublished cDNA li... 35 1.3
gb|BJ447543.1|BJ447543 BJ447543 K. Sato unpublished cDNA li... 35 1.3
gb|BJ448897.1|BJ448897 BJ448897 K. Sato unpublished cDNA li... 35 1.3
gb|BJ455296.1|BJ455296 BJ455296 K. Sato unpublished cDNA li... 35 1.3
gb|BJ462038.1|BJ462038 BJ462038 K. Sato unpublished cDNA li... 35 1.3
gb|CA030850.1|CA030850 HX08F02r HX Hordeum vulgare subsp. v... 35 1.3
gb|CB875442.1|CB875442 HX08F02w HX Hordeum vulgare subsp. v... 35 1.3
gb|CV057751.1|CV057751 BNEL30d5 Barley EST endosperm librar... 35 1.3
gb|CV059908.1|CV059908 BNEL52c2 Barley EST endosperm librar... 35 1.3
gb|AY735750.1| Hordeum vulgare subsp. vulgare clone cLN8-29... 35 1.3
gb|AY735752.1| Hordeum vulgare subsp. vulgare clone cLN8-33... 35 1.3
gb|AY735754.1| Hordeum vulgare subsp. vulgare clone hLN8-58... 35 1.3
gb|AY735755.1| Hordeum vulgare subsp. vulgare clone hLN8-29... 35 1.3
gb|AY735757.1| Hordeum vulgare subsp. vulgare clone cLN8-43... 35 1.3
gb|AY735758.1| Hordeum vulgare subsp. vulgare clone cLN8-11... 35 1.3
gb|AY735760.1| Hordeum vulgare subsp. vulgare clone cLN8-17... 35 1.3
gb|AY735761.1| Hordeum vulgare subsp. vulgare clone cLN8-18... 35 1.3
gb|AY735762.1| Hordeum vulgare subsp. vulgare clone hLN8-39... 35 1.3
gb|AY735763.1| Hordeum vulgare subsp. vulgare clone cLN4-63... 35 1.3
gb|AY735764.1| Hordeum vulgare subsp. vulgare clone cLN4-62... 35 1.3
gb|AY735765.1| Hordeum vulgare subsp. vulgare clone cLN4-59... 35 1.3
gb|AY735766.1| Hordeum vulgare subsp. vulgare clone cLN4-58... 35 1.3
gb|AY735767.1| Hordeum vulgare subsp. vulgare clone cLN4-30... 35 1.3
gb|AY735789.1| Hordeum vulgare subsp. vulgare clone cLN4-11... 35 1.3
gb|AY735790.1| Hordeum vulgare subsp. vulgare clone cLN4-07... 35 1.3
gb|AY735791.1| Hordeum vulgare subsp. vulgare clone cLN4-03... 35 1.3
gb|AY735793.1| Hordeum vulgare subsp. vulgare clone cLN4-48... 35 1.3
gb|AY735795.1| Hordeum vulgare subsp. vulgare clone cLN4-49... 35 1.3
gb|AY735796.1| Hordeum vulgare subsp. vulgare clone cLN4-25... 35 1.3
gb|AY735798.1| Hordeum vulgare subsp. vulgare clone cLN4-43... 35 1.3
gb|AY735799.1| Hordeum vulgare subsp. vulgare clone cLN4-46... 35 1.3
gb|AY735800.1| Hordeum vulgare subsp. vulgare clone cLN4-45... 35 1.3
gb|AY735801.1| Hordeum vulgare subsp. vulgare clone cLN4-22... 35 1.3
gb|AY735802.1| Hordeum vulgare subsp. vulgare clone cLN4-45... 35 1.3
gb|AY735803.1| Hordeum vulgare subsp. vulgare clone cLN4-34... 35 1.3
gb|AY735805.1| Hordeum vulgare subsp. vulgare clone cLN4-27... 35 1.3
gb|AY735808.1| Hordeum vulgare subsp. vulgare clone cLN4-26... 35 1.3
gb|AY735809.1| Hordeum vulgare subsp. vulgare clone cLN4-24... 35 1.3
gb|AY735810.1| Hordeum vulgare subsp. vulgare clone cLN4-16... 35 1.3
gb|AY735811.1| Hordeum vulgare subsp. vulgare clone cLN4-15... 35 1.3
gb|AY735812.1| Hordeum vulgare subsp. vulgare clone cLN4-13... 35 1.3
gb|AY735814.1| Hordeum vulgare subsp. vulgare clone cLN4-07... 35 1.3
gb|AY735815.1| Hordeum vulgare subsp. vulgare clone cLN4-06... 35 1.3
gb|AY735816.1| Hordeum vulgare subsp. vulgare clone cLN4-02... 35 1.3
gb|AY735817.1| Hordeum vulgare subsp. vulgare clone cLN4-23... 35 1.3
gb|AY735818.1| Hordeum vulgare subsp. vulgare clone cLN4-24... 35 1.3
gb|AY735819.1| Hordeum vulgare subsp. vulgare clone cLN4-21... 35 1.3
gb|AY735820.1| Hordeum vulgare subsp. vulgare clone cLN4-51... 35 1.3
gb|AY735822.1| Hordeum vulgare subsp. vulgare clone cLN4-53... 35 1.3
gb|AY735823.1| Hordeum vulgare subsp. vulgare clone cLN4-47... 35 1.3
gb|AY735824.1| Hordeum vulgare subsp. vulgare clone cLN4-20... 35 1.3
gb|AY735825.1| Hordeum vulgare subsp. vulgare clone cLN4-10... 35 1.3
gb|AY735980.1| Hordeum vulgare subsp. vulgare clone hLN5-22... 35 1.3
gb|AY735986.1| Hordeum vulgare subsp. vulgare clone cLN6-47... 35 1.3
gb|BF619909.2|BF619909 HVSMEc0009K12f Hordeum vulgare seedl... 29 1.5
gb|BQ462694.1|BQ462694 HI01L15T HI Hordeum vulgare subsp. v... 30 1.6
gb|BI957109.1|BI957109 HVSMEn0007H22f Hordeum vulgare rachi... 35 1.8
gb|BI958371.1|BI958371 HVSMEn0014K12f Hordeum vulgare rachi... 35 1.8
gb|BI958395.1|BI958395 HVSMEn0014M12f Hordeum vulgare rachi... 35 1.8
gb|BF631213.3|BF631213 HVSMEb0015E18f Hordeum vulgare seedl... 35 1.8
gb|BF631536.3|BF631536 HVSMEb0016E21f Hordeum vulgare seedl... 35 1.8
gb|AJ434819.1|AJ434819 AJ434819 S00002 Hordeum vulgare subs... 35 1.8
gb|BM369423.2|BM369423 EBem07_SQ003_I17_R embryo, 28 DPA, n... 35 1.8
gb|CA018487.1|CA018487 HV08M08r HV Hordeum vulgare subsp. v... 35 1.8
gb|AY735759.1| Hordeum vulgare subsp. vulgare clone hLN8-40... 35 1.8
gb|AY735794.1| Hordeum vulgare subsp. vulgare clone cLN4-51... 35 1.8
gb|AY735804.1| Hordeum vulgare subsp. vulgare clone cLN4-31... 35 1.8
gb|BF259985.2|BF259985 HVSMEf0020M19f Hordeum vulgare seedl... 28 2.0
gb|BG365374.2|BG365374 HVSMEi0002H11f Hordeum vulgare 20 DA... 29 2.0
gb|BM099228.2|BM099228 EBes01_SQ002_J18_R embryo sac, 4-6 D... 29 2.0
gb|BU996956.1|BU996956 HI06G16r HI Hordeum vulgare subsp. v... 27 2.1
gb|CV057314.1|CV057314 BNEL26d5 Barley EST endosperm librar... 29 2.1
gb|BQ768316.1|BQ768316 EBro08_SQ011_J08_R root, 3 week, dro... 29 2.1
gb|BF622515.2|BF622515 HVSMEa0004K21f Hordeum vulgare seedl... 29 2.1
>gb|BE558391.1|BE558391 HV_CEb0017H19f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0017H19f, mRNA sequence
Length = 813
Score = 456 bits (991), Expect(2) = e-146
Identities = 192/230 (83%), Positives = 203/230 (88%)
Frame = +2 / +2
Query: 122 ASVMVAIAVSKIRGRKLRLXXXXXXXXXFGNWLQVGDDLNHRNLAALSRKFGDVFLLRMG 301
A+V+ AI VSKIRGRKLRL FGNWLQVGDDLNHRNLAA++RKFG+VFLLRMG
Sbjct: 2 AAVVGAIVVSKIRGRKLRLPPGPIPVPIFGNWLQVGDDLNHRNLAAMARKFGEVFLLRMG 181
Query: 302 QRNLVVVSSPPLAREVLHTQGVEFGSRTRNVVFDIFTDKGQDMVFTVYGDHWRKMRRIMT 481
QRNLVVVSSPPLAREVLHTQGVEFGSRTRNVVFDIFT +GQDMVFTVYGDHWRKMRRIMT
Sbjct: 182 QRNLVVVSSPPLAREVLHTQGVEFGSRTRNVVFDIFTGEGQDMVFTVYGDHWRKMRRIMT 361
Query: 482 VPFFTNKVVQQYRHGWXXXXXXXXXXXRLDPKAATDGIVLRRRLQLMMYNNVYRIMFDRR 661
VPFFTNKVVQQYR GW R DP+AAT+G+VLRR LQLMMYNN+YRIMFDRR
Sbjct: 362 VPFFTNKVVQQYRPGWEAEAAFVVDNVRADPRAATEGVVLRRHLQLMMYNNMYRIMFDRR 541
Query: 662 FESMDDPLFLRLRALNGERSRLAQSFEYNYGDFIPILRPFLRGYLRVCKE 811
FESMDDPLFLRLRALNGERSRLAQSFEYNYGDFI ILRPFLRGYLR+CKE
Sbjct: 542 FESMDDPLFLRLRALNGERSRLAQSFEYNYGDFIXILRPFLRGYLRLCKE 691
Score = 336 bits (729), Expect(2) = 3e-098
Identities = 153/213 (71%), Positives = 157/213 (73%)
Frame = -1 / -1
Query: 759 KSP*LYSKLCXXXXXXXXXXXXXRKSGSSMLSKRRSNMIRYTLLYIMSCRRRRSTIPSVA 580
KSP*LYSKLC RKSGSSMLS RRSNM+RY LLYIMSCR RRST PSVA
Sbjct: 639 KSP*LYSKLCARRLRSPLSARRRRKSGSSMLSNRRSNMMRYMLLYIMSCRWRRSTTPSVA 460
Query: 579 ALGXXXXXXXXXXXXXSQPWRYCCTTLLVKKGTVMMRRILRQWSPYTVNTMSCPLSVKMS 400
ALG S P RYCCTTLLVKKGTVMMRRILRQWSPYTVNTMS P VKMS
Sbjct: 459 ALGSARTLSTTKAASASHPGRYCCTTLLVKKGTVMMRRILRQWSPYTVNTMSWPSPVKMS 280
Query: 399 KTTLRVREPNSTPCVWSTSRASGGDETTTRLRCPIRRRKTSPNLRDSAARLRWLRSSPTC 220
TTLRVR+PNSTPCV STSRASGGD+TTTRLR P+RRR TSPNLR AARLRW RSSPTC
Sbjct: 279 NTTLRVRDPNSTPCVCSTSRASGGDDTTTRLRWPMRRRNTSPNLRAIAARLRWFRSSPTC 100
Query: 219 SQFPKXXXXXXXXGSRSLRPRILDTAMATMTDA 121
SQ PK GS SLRPRILDT MA T A
Sbjct: 99 SQLPKMGTGMGPGGSLSLRPRILDTTMAPTTAA 1
Score = 228 bits (492), Expect(3) = 2e-075
Identities = 96/119 (80%), Positives = 101/119 (84%)
Frame = -3 / -3
Query: 508 HDLVGEEGHGHDAAHLAPVVAVHGEHHVLPLVREDVEDHVAGAGAELHALRVEHLPRQRR 329
H LVGEEGHGHDA HLAPVVAVHGEHHVL L EDVE HVAGAG ELHALRV+HLPRQRR
Sbjct: 388 HHLVGEEGHGHDAPHLAPVVAVHGEHHVLALAGEDVEHHVAGAGPELHALRVQHLPRQRR 209
Query: 328 RRDHHQVALPHPEEEDVAELAGQRGEVAVVEVVADLQPVPEDGHGDGAGRQPELAATDL 152
R HHQVAL H EEE +AELAG R +VAVV+VVADLQPV EDGH DGA RQP+LAA DL
Sbjct: 208 GRHHHQVALAHAEEEHLAELAGHRRQVAVVQVVADLQPVTEDGHRDGARRQPQLAAPDL 32
Score = 101 bits (215), Expect(4) = 5e-034
Identities = 38/44 (86%), Positives = 41/44 (93%)
Frame = +1 / +1
Query: 370 VRLPHPQRGLRHLHGQGAGHGVHRVRRPLAQDAPHHDRALLHQQ 501
VR+PHPQRG+RHLH +G GHGVHRVRRPLAQDA HHDRALLHQQ
Sbjct: 250 VRVPHPQRGVRHLHRRGPGHGVHRVRRPLAQDAAHHDRALLHQQ 381
Score = 84.5 bits (178), Expect(2) = e-146
Identities = 35/41 (85%), Positives = 38/41 (92%)
Frame = +2 / +1
Query: 812 VKETRLKLFKDFFLEERKKLASTKATDSNGLKCAIDHILEA 934
VKETRLKLFKD+ L ERKKLA+TKA D+NGLKCAIDHILEA
Sbjct: 691 VKETRLKLFKDYXLNERKKLANTKAMDNNGLKCAIDHILEA 813
Score = 67.0 bits (140), Expect(3) = 2e-075
Identities = 26/35 (74%), Positives = 30/35 (85%)
Frame = -3 / -3
Query: 673 HALEAPVEHDPVYVVVHHELQASAEHDSVGGRLGV 569
HALE PVEHD V+VVVHHELQ +AEHD++GG GV
Sbjct: 553 HALEPPVEHDAVHVVVHHELQVAAEHDALGGGPGV 449
Score = 58.3 bits (121), Expect(4) = 5e-034
Identities = 21/26 (80%), Positives = 23/26 (88%)
Frame = +1 / +1
Query: 595 RAPPTPAAHDVQQRIPDHVRPALREH 672
RAPP PAAHDVQQ +P HVRPA+REH
Sbjct: 475 RAPPPPAAHDVQQHVPHHVRPAVREH 552
Score = 43.7 bits (89), Expect(2) = 3e-098
Identities = 20/24 (83%), Positives = 21/24 (87%)
Frame = -1 / -2
Query: 933 ASSM*SMAHLRPLLSVALVLASFF 862
AS M*SMAHL PLLS+ALV ASFF
Sbjct: 812 ASRM*SMAHLSPLLSMALVFASFF 741
Score = 39.1 bits (79), Expect(2) = 0.024
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = -2 / -2
Query: 500 CW*RRARS*CGASCAS 453
CW*RRARS*C ASCAS
Sbjct: 380 CW*RRARS*CAASCAS 333
Score = 37.3 bits (75), Expect = 0.27
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +3 / +3
Query: 423 RTWCSPCTATTG 458
RTWCSPCTATTG
Sbjct: 303 RTWCSPCTATTG 338
Score = 34.1 bits (68), Expect(3) = 2e-075
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = -3 / -1
Query: 922 VINGALEAVAVRGLGARQ 869
VINGALE+V V GLG RQ
Sbjct: 801 VINGALESVVVHGLGVRQ 748
Score = 24.9 bits (48), Expect(4) = 5e-034
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +3 / +3
Query: 162 AASSGCLPAPSPCP 203
AAS GC APS CP
Sbjct: 42 AAS*GCRRAPSRCP 83
Score = 24.9 bits (48), Expect(4) = 5e-034
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +1 / +1
Query: 127 RHGRHRGVQD 156
R GRHRGVQD
Sbjct: 7 RGGRHRGVQD 36
Score = 23.1 bits (44), Expect(2) = 0.024
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -2 / -3
Query: 923 CDQWRT*GR 897
CDQWRT* R
Sbjct: 802 CDQWRT*VR 776
>gb|CA025894.1|CA025894 HZ53H05r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ53H05
5-PRIME, mRNA sequence
Length = 579
Score = 426 bits (924), Expect = e-118
Identities = 173/192 (90%), Positives = 185/192 (96%)
Frame = +2 / +2
Query: 728 AQSFEYNYGDFIPILRPFLRGYLRVCKEVKETRLKLFKDFFLEERKKLASTKATDSNGLK 907
AQSFEYNYGDFIPILRPFLRGYLR+CKEVKETRLKLFKD+FL+ERKKLASTKA D+NGLK
Sbjct: 2 AQSFEYNYGDFIPILRPFLRGYLRLCKEVKETRLKLFKDYFLDERKKLASTKAMDNNGLK 181
Query: 908 CAIDHILEAQQKGEINEDNVLFIVENINVAAIETTLWSIEWAVAELVNHPEIQQKLRQEL 1087
CAIDHILEA+QKGEINEDNVL+I+ENINVAAIETTLWSIEW +AELVNHPEIQQKLR E+
Sbjct: 182 CAIDHILEAEQKGEINEDNVLYIIENINVAAIETTLWSIEWGLAELVNHPEIQQKLRDEM 361
Query: 1088 DTVLGPGHQITEPDTHNLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKI 1267
D VLG GHQITEPDTH LPYLQAVIKETLRLRMAIPLLVPHMNLHDAKL GY+IPAESKI
Sbjct: 362 DAVLGVGHQITEPDTHRLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLAGYNIPAESKI 541
Query: 1268 LVNAWYLANNPD 1303
LVNAW+LANNP+
Sbjct: 542 LVNAWFLANNPE 577
Score = 269 bits (581), Expect(3) = 1e-073
Identities = 122/143 (85%), Positives = 125/143 (87%)
Frame = -1 / -1
Query: 1290 ARYQALTRILLSAGMSXPPSLASWRFMCGTSSGMAIRSRSVSLITACR*GRLCVSGSVIW 1111
AR QALTRILLSAGM P SLASWRFM GTSSGMA+RSRSVSLITACR*G LCVSGSVIW
Sbjct: 564 ARNQALTRILLSAGML*PASLASWRFMWGTSSGMAMRSRSVSLITACR*GSLCVSGSVIW 385
Query: 1110 WPGPSTVSSSCRSFCWISGWFTSSATAHSIDHSVVSIAATLMFSTMKSTLSSLISPFCCA 931
P PST S S RSFCWISGWFTSSA+ HSIDHSVVSIAATLMFS M TLSSLISPFC A
Sbjct: 384 CPTPSTASISSRSFCWISGWFTSSASPHSIDHSVVSIAATLMFSMM*RTLSSLISPFCSA 205
Query: 930 SSM*SMAHLRPLLSVALVLASFF 862
S M*SMAHL PLLS+ALVLASFF
Sbjct: 204 SRM*SMAHLSPLLSMALVLASFF 136
Score = 122 bits (262), Expect(2) = 6e-032
Identities = 56/88 (63%), Positives = 59/88 (67%)
Frame = -3 / -3
Query: 1261 ALGGDVVXAELGVVEVHVRHQQRDGHPQPQRLLDHRLQVGEXXXXXXXXXXXRPEHRVXX 1082
ALGGDVV ELGVVEVHV HQQRDGH QPQRLLDHRLQVG+ +HRV
Sbjct: 535 ALGGDVVAGELGVVEVHVGHQQRDGHAQPQRLLDHRLQVGQPVRVRLRDLVPDAQHRVHL 356
Query: 1081 XXXXXXXLRVVHQLSDRPLDRPQRGLDR 998
LRVVHQL + PLDRPQR LDR
Sbjct: 355 VPQLLLDLRVVHQLREPPLDRPQRRLDR 272
Score = 74.4 bits (156), Expect = 2e-012
Identities = 36/61 (59%), Positives = 36/61 (59%)
Frame = +1 / +1
Query: 847 LPRXXXXXXXXXXXXXXRPQVRH*SHTGGTAEG*DQRGQRALHRREH*RCSDRDHAVVDR 1026
LPR R QVRH*SH G AEG DQRGQR LH REH R DRD AVVDR
Sbjct: 121 LPRREEEAGEHQGHGQQRTQVRH*SHPRGRAEGGDQRGQRPLHHREHQRRRDRDDAVVDR 300
Query: 1027 V 1029
V
Sbjct: 301 V 303
Score = 35.9 bits (72), Expect(2) = 6e-032
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = -3 / -3
Query: 922 VINGALEAVAVRGLGARQ 869
VINGALE+V V GLGARQ
Sbjct: 196 VINGALESVVVHGLGARQ 143
Score = 25.8 bits (50), Expect(3) = 1e-073
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = -1 / -1
Query: 759 KSP*LYSKLC 730
KSP*LYSKLC
Sbjct: 33 KSP*LYSKLC 4
Score = 22.6 bits (43), Expect(3) = 1e-073
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -3 / -3
Query: 793 VAAEERTEDGD 761
VAAEE EDGD
Sbjct: 67 VAAEEGAEDGD 35
>gb|AL504109.1|AL504109 AL504109 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW04D19V 5', mRNA sequence
Length = 700
Score = 376 bits (815), Expect = e-103
Identities = 155/215 (72%), Positives = 180/215 (83%)
Frame = +2 / +3
Query: 224 VGDDLNHRNLAALSRKFGDVFLLRMGQRNLVVVSSPPLAREVLHTQGVEFGSRTRNVVFD 403
VGDDLNHRNL L+++FG+ FLLRMG RNLVVVSSP LA+EVLHTQGVEFGSRTRNVVFD
Sbjct: 9 VGDDLNHRNLMGLAKRFGEXFLLRMGVRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVFD 188
Query: 404 IFTDKGQDMVFTVYGDHWRKMRRIMTVPFFTNKVVQQYRHGWXXXXXXXXXXXRLDPKAA 583
IFT KGQDMVFTVYGDHWRKMRRIMTVPFFTNKVV Q R GW R DP AA
Sbjct: 189 IFTGKGQDMVFTVYGDHWRKMRRIMTVPFFTNKVVAQNRVGWXEEARLVVEDLRADPAAA 368
Query: 584 TDGIVLRRRLQLMMYNNVYRIMFDRRFESMDDPLFLRLRALNGERSRLAQSFEYNYGDFI 763
T G+ +RRRLQLMMYN+++RIMFDRRFE++ DPLF +L+ALN ERS L+QSF+YNYGDFI
Sbjct: 369 TKGVXVRRRLQLMMYNDMFRIMFDRRFETVADPLFNQLKALNAERSILSQSFDYNYGDFI 548
Query: 764 PILRPFLRGYLRVCKEVKETRLKLFKDFFLEERKK 868
P+LRPFLR YL C +K R+K+F+D F+++RK+
Sbjct: 549 PVLRPFLRRYLNRCTNLKTKRMKVFEDHFVQQRKE 653
Score = 246 bits (532), Expect(2) = 7e-065
Identities = 112/179 (62%), Positives = 119/179 (66%)
Frame = -1 / -1
Query: 759 KSP*LYSKLCXXXXXXXXXXXXXRKSGSSMLSKRRSNMIRYTLLYIMSCRRRRSTIPSVA 580
KSP*L SKL KSGS+ +S RRSNM+R LYIMSC RR+ P VA
Sbjct: 544 KSP*L*SKLWERMLRSALSALSWLKSGSATVSNRRSNMMRNMSLYIMSCSLRRTXTPLVA 365
Query: 579 ALGXXXXXXXXXXXXXSQPWRYCCTTLLVKKGTVMMRRILRQWSPYTVNTMSCPLSVKMS 400
A G P R+C TTLLVKKGTVM+RRILRQWSPYTVNTMSCPL VKMS
Sbjct: 364 AAGSALRSSTTSRASSXHPTRFCATTLLVKKGTVMIRRILRQWSPYTVNTMSCPLPVKMS 185
Query: 399 KTTLRVREPNSTPCVWSTSRASGGDETTTRLRCPIRRRKTSPNLRDSAARLRWLRSSPT 223
KTTLRVREPNSTP VW TS AS G TTTRLR P+RRR SPN RLRWLRSSPT
Sbjct: 184 KTTLRVREPNSTPWVWRTSLASSGLXTTTRLRTPMRRRNXSPNRLARPIRLRWLRSSPT 8
Score = 137 bits (293), Expect(2) = 2e-038
Identities = 65/96 (67%), Positives = 68/96 (70%)
Frame = -3 / -3
Query: 508 HDLVGEEGHGHDAAHLAPVVAVHGEHHVLPLVREDVEDHVAGAGAELHALRVEHLPRQRR 329
H LVGEEGH HD HLAPVVAVH EHHVL L EDVED VAGAGAEL AL VE L +
Sbjct: 293 HHLVGEEGHRHDPPHLAPVVAVHREHHVLSLAGEDVEDDVAGAGAELDALGVEDLLGELG 114
Query: 328 RRDHHQVALPHPEEEDVAELAGQRGEVAVVEVVADL 221
HQVA H EEE +AE GQ +VAVVEVVADL
Sbjct: 113 AGXDHQVADAHAEEEXLAEPLGQAHQVAVVEVVADL 6
Score = 92.3 bits (195), Expect(2) = 8e-023
Identities = 37/44 (84%), Positives = 37/44 (84%)
Frame = +1 / +2
Query: 370 VRLPHPQRGLRHLHGQGAGHGVHRVRRPLAQDAPHHDRALLHQQ 501
VRLPHPQR LRHLH QG GHGVH VRRPLAQDA HD ALLHQQ
Sbjct: 155 VRLPHPQRRLRHLHRQGTGHGVHGVRRPLAQDAADHDGALLHQQ 286
Score = 43.7 bits (89), Expect(2) = 2e-038
Identities = 17/32 (53%), Positives = 22/32 (68%)
Frame = -3 / -3
Query: 673 HALEAPVEHDPVYVVVHHELQASAEHDSVGGR 578
H LE VEHD +VVVHHELQ ++ ++G R
Sbjct: 458 HGLEPAVEHDAEHVVVHHELQPASHXHALGRR 363
Score = 35.9 bits (72), Expect(2) = 8e-023
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = +1 / +2
Query: 613 AAHDVQQRIPDHVRPALRE 669
AAHDVQ+ +P HVRP +R+
Sbjct: 398 AAHDVQRHVPHHVRPPVRD 454
Score = 33.1 bits (66), Expect = 4.8
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = +3 / +1
Query: 423 RTWCSPCTATTG 458
RTWCS CTATTG
Sbjct: 208 RTWCSRCTATTG 243
Score = 22.6 bits (43), Expect(2) = 7e-065
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -3 / -3
Query: 793 VAAEERTEDGD 761
VAAEE EDGD
Sbjct: 578 VAAEEGAEDGD 546
>gb|BQ470705.1|BQ470705 HX03M12r HX Hordeum vulgare subsp. vulgare cDNA clone HX03M12
5-PRIME, mRNA sequence
Length = 650
Score = 266 bits (576), Expect(2) = e-102
Identities = 108/131 (82%), Positives = 120/131 (91%)
Frame = +2 / +2
Query: 902 LKCAIDHILEAQQKGEINEDNVLFIVENINVAAIETTLWSIEWAVAELVNHPEIQQKLRQ 1081
+KCA+DHILEA++KGEIN DNVL+IVENINVAAIETTLWSIEW +AELVNHPEIQQKLR+
Sbjct: 257 IKCAMDHILEAERKGEINHDNVLYIVENINVAAIETTLWSIEWGLAELVNHPEIQQKLRE 436
Query: 1082 ELDTVLGPGHQITEPDTHNLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAES 1261
E+ VLGPG +TEPD LPYLQ+V+KETLRLRMAIPLLVPHMNL DAKL GYDIPAES
Sbjct: 437 EIVAVLGPGTPVTEPDLERLPYLQSVVKETLRLRMAIPLLVPHMNLSDAKLAGYDIPAES 616
Query: 1262 KILVNAWYLAN 1294
KILVNAW+LAN
Sbjct: 617 KILVNAWFLAN 649
Score = 206 bits (445), Expect(3) = 3e-058
Identities = 98/129 (75%), Positives = 101/129 (78%)
Frame = -1 / -3
Query: 1290 ARYQALTRILLSAGMSXPPSLASWRFMCGTSSGMAIRSRSVSLITACR*GRLCVSGSVIW 1111
AR QALTRIL SAGMS P SLAS RFMCGT SGMA+R RSVS T CR*GR SGSV
Sbjct: 645 ARNQALTRILDSAGMS*PASLASLRFMCGTRSGMAMRRRSVSFTTDCR*GRRSRSGSVTG 466
Query: 1110 WPGPSTVSSSCRSFCWISGWFTSSATAHSIDHSVVSIAATLMFSTMKSTLSSLISPFCCA 931
PGPST + S RSFCWISGWFTSSA HSIDHSVVS+AATLMFSTM TLS LISPF A
Sbjct: 465 VPGPSTATISSRSFCWISGWFTSSARPHSIDHSVVSMAATLMFSTM*RTLSWLISPFLSA 286
Query: 930 SSM*SMAHL 904
S M SMAHL
Sbjct: 285 SRMWSMAHL 259
Score = 127 bits (273), Expect(2) = e-102
Identities = 49/78 (62%), Positives = 66/78 (84%)
Frame = +2 / +2
Query: 635 VYRIMFDRRFESMDDPLFLRLRALNGERSRLAQSFEYNYGDFIPILRPFLRGYLRVCKEV 814
++RIMFDRRFE++ DPLF +L+ALN ERS L+QSF+YNYGDFIP+LRPFLR YL C +
Sbjct: 2 MFRIMFDRRFETVADPLFNQLKALNAERSILSQSFDYNYGDFIPVLRPFLRRYLNRCTNL 181
Query: 815 KETRLKLFKDFFLEERKK 868
K R+K+F+D F+++RK+
Sbjct: 182 KTKRMKVFEDHFVQQRKE 235
Score = 99.1 bits (210), Expect = 7e-020
Identities = 45/88 (51%), Positives = 53/88 (60%)
Frame = -3 / -2
Query: 1255 GGDVVXAELGVVEVHVRHQQRDGHPQPQRLLDHRLQVGEXXXXXXXXXXXRPEHRVXXXX 1076
GGDVV ELG+ EVHVRHQ+RDGH + +RLL LQVGE R +H
Sbjct: 610 GGDVVTGELGIAEVHVRHQERDGHAEAERLLHDGLQVGEALQVRLRHRRARAQHGDDLLA 431
Query: 1075 XXXXXLRVVHQLSDRPLDRPQRGLDRCN 992
LRVVHQL + PLDRPQR L+ C+
Sbjct: 430 QLLLDLRVVHQLREAPLDRPQRRLNGCD 347
Score = 55.6 bits (115), Expect = 8e-007
Identities = 27/42 (64%), Positives = 27/42 (64%)
Frame = +1 / +1
Query: 904 QVRH*SHTGGTAEG*DQRGQRALHRREH*RCSDRDHAVVDRV 1029
QVRH H G EG DQ QR LHRREH R S D AVVDRV
Sbjct: 259 QVRHGPHPGSRKEGRDQPRQRPLHRREHQRRSH*DDAVVDRV 384
Score = 36.3 bits (73), Expect(3) = 3e-058
Identities = 19/40 (47%), Positives = 22/40 (55%)
Frame = -1 / -3
Query: 759 KSP*LYSKLCXXXXXXXXXXXXXRKSGSSMLSKRRSNMIR 640
KSP*L SKL KSGS+ +S RRSNM+R
Sbjct: 126 KSP*L*SKLWERMLRSALSALSWLKSGSATVSNRRSNMMR 7
Score = 22.6 bits (43), Expect(3) = 3e-058
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -3 / -2
Query: 793 VAAEERTEDGD 761
VAAEE EDGD
Sbjct: 160 VAAEEGAEDGD 128
>gb|AL504406.1|AL504406 AL504406 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW05D01V 5', mRNA sequence
Length = 689
Score = 225 bits (485), Expect(3) = 2e-099
Identities = 92/117 (78%), Positives = 103/117 (88%)
Frame = +2 / +2
Query: 902 LKCAIDHILEAQQKGEINEDNVLFIVENINVAAIETTLWSIEWAVAELVNHPEIQQKLRQ 1081
+KCA+DHILEA++KGEIN DNVL+IVENINVAAIETTLWSIEW +AELVNHPEIQQKLR+
Sbjct: 296 IKCAMDHILEAERKGEINHDNVLYIVENINVAAIETTLWSIEWGLAELVNHPEIQQKLRE 475
Query: 1082 ELDTVLGPGHQITEPDTHNLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIP 1252
E+ VLGPG +TEPD LPYLQ+V+KETLRLRMAIPLLVPHMNL DAKL G P
Sbjct: 476 EIVAVLGPGTPVTEPDLERLPYLQSVVKETLRLRMAIPLLVPHMNLSDAKLAGLRHP 646
Score = 182 bits (391), Expect(3) = 3e-055
Identities = 84/116 (72%), Positives = 87/116 (75%)
Frame = -1 / -3
Query: 1251 GMSXPPSLASWRFMCGTSSGMAIRSRSVSLITACR*GRLCVSGSVIWWPGPSTVSSSCRS 1072
G P SLAS RFMCGT SGMA+R R VS T CR*GR SGSV PGPST + S RS
Sbjct: 645 GCRKPASLASLRFMCGTRSGMAMRRRXVSFTTDCR*GRRSRSGSVTGVPGPSTATISSRS 466
Query: 1071 FCWISGWFTSSATAHSIDHSVVSIAATLMFSTMKSTLSSLISPFCCASSM*SMAHL 904
FCWISGWFTSSA HSIDHSVVS+AATLMFSTM TLS LISPF AS M SMAHL
Sbjct: 465 FCWISGWFTSSARPHSIDHSVVSMAATLMFSTM*RTLSWLISPFLSASRMWSMAHL 298
Score = 149 bits (320), Expect(3) = 2e-099
Identities = 58/91 (63%), Positives = 77/91 (84%)
Frame = +2 / +2
Query: 596 VLRRRLQLMMYNNVYRIMFDRRFESMDDPLFLRLRALNGERSRLAQSFEYNYGDFIPILR 775
V+RRRLQ MYN+++RIMFDRRFE++ DPLF +L+ALN ERS L+QSF+YNYGDFIP+LR
Sbjct: 2 VVRRRLQFXMYNDMFRIMFDRRFETVADPLFNQLKALNAERSILSQSFDYNYGDFIPVLR 181
Query: 776 PFLRGYLRVCKEVKETRLKLFKDFFLEERKK 868
PFLR YL C +K R+K+F+D F+++RK+
Sbjct: 182 PFLRRYLNRCTNLKTKRMKVFEDHFVQQRKE 274
Score = 84.5 bits (178), Expect(2) = 2e-020
Identities = 39/81 (48%), Positives = 47/81 (58%)
Frame = -3 / -2
Query: 1234 ELGVVEVHVRHQQRDGHPQPQRLLDHRLQVGEXXXXXXXXXXXRPEHRVXXXXXXXXXLR 1055
ELG+ EVHVRHQ+RDGH + + LL LQVGE R +H LR
Sbjct: 628 ELGIAEVHVRHQERDGHAEAEXLLHDGLQVGEALQVRLRHRRARAQHGDDLLAQLLLDLR 449
Query: 1054 VVHQLSDRPLDRPQRGLDRCN 992
VVHQL + PLDRPQR L+ C+
Sbjct: 448 VVHQLREAPLDRPQRRLNGCD 386
Score = 55.6 bits (115), Expect(2) = 3e-009
Identities = 27/42 (64%), Positives = 27/42 (64%)
Frame = +1 / +1
Query: 904 QVRH*SHTGGTAEG*DQRGQRALHRREH*RCSDRDHAVVDRV 1029
QVRH H G EG DQ QR LHRREH R S D AVVDRV
Sbjct: 298 QVRHGPHPGSRKEGRDQPRQRPLHRREHQRRSH*DDAVVDRV 423
Score = 51.0 bits (105), Expect(3) = 3e-055
Identities = 26/55 (47%), Positives = 31/55 (56%)
Frame = -1 / -3
Query: 759 KSP*LYSKLCXXXXXXXXXXXXXRKSGSSMLSKRRSNMIRYTLLYIMSCRRRRST 595
KSP*L SKL KSGS+ +S RRSNM+R LYI +C RR+T
Sbjct: 165 KSP*L*SKLWERMLRSALSALSWLKSGSATVSNRRSNMMRNMSLYIXNCSLRRTT 1
Score = 39.1 bits (79), Expect(2) = 2e-020
Identities = 15/26 (57%), Positives = 18/26 (69%)
Frame = -3 / -2
Query: 673 HALEAPVEHDPVYVVVHHELQASAEH 596
H LE VEHD +VVVH ELQ ++ H
Sbjct: 79 HGLEPAVEHDAEHVVVHXELQPASHH 2
Score = 29.9 bits (59), Expect(2) = 3e-009
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +1 / +1
Query: 613 AAHDVQQRIPDHVRPALRE 669
A DVQ+ +P HVRP +R+
Sbjct: 19 AVXDVQRHVPHHVRPPVRD 75
Score = 29.5 bits (58), Expect(3) = 2e-099
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = +2 / +1
Query: 1256 ESKILVNAWYLA 1291
ESKILVNAW+LA
Sbjct: 652 ESKILVNAWFLA 687
Score = 22.6 bits (43), Expect(3) = 3e-055
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -3 / -2
Query: 793 VAAEERTEDGD 761
VAAEE EDGD
Sbjct: 199 VAAEEGAEDGD 167
>gb|BQ664209.1|BQ664209 HV02F12u HV Hordeum vulgare subsp. vulgare cDNA clone HV02F12
3-PRIME, mRNA sequence
Length = 643
Score = 274 bits (593), Expect(2) = 4e-095
Identities = 110/136 (80%), Positives = 123/136 (90%)
Frame = +2 / -2
Query: 902 LKCAIDHILEAQQKGEINEDNVLFIVENINVAAIETTLWSIEWAVAELVNHPEIQQKLRQ 1081
+KCA+DHILEA++KGEIN DNVL+IVENINVAAIETTLWSIEW +AELVNHPEIQQKLR+
Sbjct: 444 IKCAMDHILEAERKGEINHDNVLYIVENINVAAIETTLWSIEWGLAELVNHPEIQQKLRE 265
Query: 1082 ELDTVLGPGHQITEPDTHNLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAES 1261
E+ VLGPG +TEPD LPYLQ+V+KETLRLRMAIPLLVPHMNL DAKL GYDIPAES
Sbjct: 264 EIVAVLGPGTPVTEPDLERLPYLQSVVKETLRLRMAIPLLVPHMNLSDAKLAGYDIPAES 85
Query: 1262 KILVNAWYLANNPDSW 1309
KILVNAW+LAN+P W
Sbjct: 84 KILVNAWFLANDPKRW 37
Score = 206 bits (445), Expect = 3e-052
Identities = 98/129 (75%), Positives = 101/129 (78%)
Frame = -1 / +2
Query: 1290 ARYQALTRILLSAGMSXPPSLASWRFMCGTSSGMAIRSRSVSLITACR*GRLCVSGSVIW 1111
AR QALTRIL SAGMS P SLAS RFMCGT SGMA+R RSVS T CR*GR SGSV
Sbjct: 56 ARNQALTRILDSAGMS*PASLASLRFMCGTRSGMAMRRRSVSFTTDCR*GRRSRSGSVTG 235
Query: 1110 WPGPSTVSSSCRSFCWISGWFTSSATAHSIDHSVVSIAATLMFSTMKSTLSSLISPFCCA 931
PGPST + S RSFCWISGWFTSSA HSIDHSVVS+AATLMFSTM TLS LISPF A
Sbjct: 236 VPGPSTATISSRSFCWISGWFTSSARPHSIDHSVVSMAATLMFSTM*RTLSWLISPFLSA 415
Query: 930 SSM*SMAHL 904
S M SMAHL
Sbjct: 416 SRMWSMAHL 442
Score = 99.1 bits (210), Expect = 7e-020
Identities = 45/88 (51%), Positives = 53/88 (60%)
Frame = -3 / +1
Query: 1255 GGDVVXAELGVVEVHVRHQQRDGHPQPQRLLDHRLQVGEXXXXXXXXXXXRPEHRVXXXX 1076
GGDVV ELG+ EVHVRHQ+RDGH + +RLL LQVGE R +H
Sbjct: 91 GGDVVTGELGIAEVHVRHQERDGHAEAERLLHDGLQVGEALQVRLRHRRARAQHGDDLLA 270
Query: 1075 XXXXXLRVVHQLSDRPLDRPQRGLDRCN 992
LRVVHQL + PLDRPQR L+ C+
Sbjct: 271 QLLLDLRVVHQLREAPLDRPQRRLNGCD 354
Score = 95.5 bits (202), Expect(2) = 4e-095
Identities = 36/59 (61%), Positives = 49/59 (83%)
Frame = +2 / -2
Query: 692 RLRALNGERSRLAQSFEYNYGDFIPILRPFLRGYLRVCKEVKETRLKLFKDFFLEERKK 868
+L+ALN ERS L+QSF+YNYGDFIP+LRPFLR YL C +K R+K+F+D F+++RK+
Sbjct: 642 QLKALNAERSILSQSFDYNYGDFIPVLRPFLRRYLNRCTNLKTKRMKVFEDHFVQQRKE 466
Score = 55.6 bits (115), Expect = 8e-007
Identities = 27/42 (64%), Positives = 27/42 (64%)
Frame = +1 / -1
Query: 904 QVRH*SHTGGTAEG*DQRGQRALHRREH*RCSDRDHAVVDRV 1029
QVRH H G EG DQ QR LHRREH R S D AVVDRV
Sbjct: 442 QVRHGPHPGSRKEGRDQPRQRPLHRREHQRRSH*DDAVVDRV 317
>gb|BG367496.1|BG367496 HVSMEi0012H14f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0012H14f, mRNA sequence
Length = 713
Score = 210 bits (453), Expect(3) = 4e-093
Identities = 86/136 (63%), Positives = 106/136 (77%)
Frame = +2 / +3
Query: 461 KMRRIMTVPFFTNKVVQQYRHGWXXXXXXXXXXXRLDPKAATDGIVLRRRLQLMMYNNVY 640
KMRRIMTVPFFTNKVV Q R GW R DP AAT G+V+RR LQLMMYN+++
Sbjct: 3 KMRRIMTVPFFTNKVVAQNRVGWEEEARLVVEDLRADPAAATKGVVVRRXLQLMMYNDMF 182
Query: 641 RIMFDRRFESMDDPLFLRLRALNGERSRLAQSFEYNYGDFIPILRPFLRGYLRVCKEVKE 820
RIMFDRRFE++ DPLF +L+ALN ERS L+QSF+YNYGDFIP+LRPFLR YL C +K
Sbjct: 183 RIMFDRRFETVADPLFNQLKALNAERSILSQSFDYNYGDFIPVLRPFLRRYLNRCTNLKT 362
Query: 821 TRLKLFKDFFLEERKK 868
R+K+F+D F+++RK+
Sbjct: 363 KRMKVFEDHFVQQRKE 410
Score = 131 bits (281), Expect(3) = 4e-093
Identities = 53/68 (77%), Positives = 60/68 (88%)
Frame = +2 / +3
Query: 902 LKCAIDHILEAQQKGEINEDNVLFIVENINVAAIETTLWSIEWAVAELVNHPEIQQKLRQ 1081
+KCA+DHILEA++KGEIN DNVL+IVENINVA IETTLWSIEW AELVNHPEI KLR+
Sbjct: 432 IKCAMDHILEAERKGEINHDNVLYIVENINVATIETTLWSIEWGPAELVNHPEIHLKLRE 611
Query: 1082 ELDTVLGP 1105
E+ VLGP
Sbjct: 612 EILPVLGP 635
Score = 106 bits (227), Expect(4) = 2e-051
Identities = 50/67 (74%), Positives = 51/67 (76%)
Frame = -1 / -2
Query: 1104 GPSTVSSSCRSFCWISGWFTSSATAHSIDHSVVSIAATLMFSTMKSTLSSLISPFCCASS 925
GPST S RS WISGWFTSSA HSIDHSVVS+ ATLMFSTM TLS LISPF AS
Sbjct: 634 GPSTGRISSRSLRWISGWFTSSAGPHSIDHSVVSMVATLMFSTM*RTLSWLISPFLSASR 455
Query: 924 M*SMAHL 904
M SMAHL
Sbjct: 454 MWSMAHL 434
Score = 106 bits (226), Expect(4) = 2e-051
Identities = 52/100 (52%), Positives = 58/100 (58%)
Frame = -1 / -2
Query: 759 KSP*LYSKLCXXXXXXXXXXXXXRKSGSSMLSKRRSNMIRYTLLYIMSCRRRRSTIPSVA 580
KSP*L SKL KSGS+ +S RRSNM+R LYIMSC RR+T P VA
Sbjct: 301 KSP*L*SKLWERMLRSALSALSWLKSGSATVSNRRSNMMRNMSLYIMSCSXRRTTTPLVA 122
Query: 579 ALGXXXXXXXXXXXXXSQPWRYCCTTLLVKKGTVMMRRIL 460
A G S P R+C TTLLVKKGTVM+RRIL
Sbjct: 121 AAGSALRSSTTSRASSSHPTRFCATTLLVKKGTVMIRRIL 2
Score = 54.2 bits (112), Expect(3) = 4e-013
Identities = 26/42 (61%), Positives = 27/42 (64%)
Frame = +1 / +2
Query: 904 QVRH*SHTGGTAEG*DQRGQRALHRREH*RCSDRDHAVVDRV 1029
QVRH H G EG DQ QR LHRREH R + D AVVDRV
Sbjct: 434 QVRHGPHPGSRKEGRDQPRQRPLHRREHQRRNH*DDAVVDRV 559
Score = 48.3 bits (99), Expect(3) = 5e-014
Identities = 18/32 (56%), Positives = 23/32 (71%)
Frame = -3 / -1
Query: 673 HALEAPVEHDPVYVVVHHELQASAEHDSVGGR 578
H LE VEHD +VVVHHELQ ++ H ++G R
Sbjct: 215 HGLEPAVEHDAEHVVVHHELQXASHHHALGRR 120
Score = 40.5 bits (82), Expect(3) = 4e-093
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = +2 / +1
Query: 1097 LGPGHQITEPDTHNLPYLQAVIKE 1168
LGPG +TEPD LPYL +V+KE
Sbjct: 628 LGPGPPVTEPDLDRLPYLASVLKE 699
Score = 39.6 bits (80), Expect(3) = 5e-014
Identities = 18/37 (48%), Positives = 21/37 (56%)
Frame = -3 / -1
Query: 1102 PEHRVXXXXXXXXXLRVVHQLSDRPLDRPQRGLDRCN 992
P+H LRVVHQL PLDRPQR L+ C+
Sbjct: 632 PKHGEDLLAQLKMDLRVVHQLRGAPLDRPQRRLNGCD 522
Score = 35.9 bits (72), Expect(3) = 4e-013
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = +1 / +2
Query: 613 AAHDVQQRIPDHVRPALRE 669
AAHDVQ+ +P HVRP +R+
Sbjct: 155 AAHDVQRHVPHHVRPPVRD 211
Score = 33.6 bits (67), Expect(3) = 5e-014
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = -3 / -1
Query: 508 HDLVGEEGHGHDAAHL 461
H LVGEEGH HD HL
Sbjct: 50 HHLVGEEGHRHDPPHL 3
Score = 28.1 bits (55), Expect(3) = 4e-013
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = +1 / +2
Query: 460 QDAPHHDRALLHQQ 501
QDA HD ALLHQQ
Sbjct: 2 QDAADHDGALLHQQ 43
Score = 24.9 bits (48), Expect(4) = 2e-051
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = -1 / -1
Query: 1167 SLITACR*GRLCVSGSVIWWPGP 1099
S T R*GR SGSV PGP
Sbjct: 698 SFKTDAR*GRRSRSGSVTGGPGP 630
Score = 22.6 bits (43), Expect(4) = 2e-051
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -3 / -1
Query: 793 VAAEERTEDGD 761
VAAEE EDGD
Sbjct: 335 VAAEEGAEDGD 303
>gb|BF620285.2|BF620285 HVSMEc0019F06f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0019F06f, mRNA sequence
Length = 688
Score = 322 bits (698), Expect = 3e-087
Identities = 135/195 (69%), Positives = 157/195 (80%)
Frame = +2 / +1
Query: 122 ASVMVAIAVSKIRGRKLRLXXXXXXXXXFGNWLQVGDDLNHRNLAALSRKFGDVFLLRMG 301
A+ ++AIAV+K+ G++ RL GNWLQVGDDLNHRNL L+++FG+VFLLRMG
Sbjct: 103 AAAVLAIAVAKLAGKRFRLPPGPSGAPIVGNWLQVGDDLNHRNLMGLAKRFGEVFLLRMG 282
Query: 302 QRNLVVVSSPPLAREVLHTQGVEFGSRTRNVVFDIFTDKGQDMVFTVYGDHWRKMRRIMT 481
RNLVVVSSP LA+EVLHTQGVEFGSRTRNVVFDIFT KGQDMVFTVYGDHWRKMRRIMT
Sbjct: 283 VRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGDHWRKMRRIMT 462
Query: 482 VPFFTNKVVQQYRHGWXXXXXXXXXXXRLDPKAATDGIVLRRRLQLMMYNNVYRIMFDRR 661
VPFFTNKVV R GW R DP AAT G+V+RR+LQLMMYN+++RIMFDRR
Sbjct: 463 VPFFTNKVVAXNRVGWEEEARLVVEDLRADPAAATKGVVVRRKLQLMMYNDMFRIMFDRR 642
Query: 662 FESMDDPLFLRLRAL 706
FE++ DPLF +L+AL
Sbjct: 643 FETVADPLFNQLKAL 687
Score = 281 bits (608), Expect = 8e-075
Identities = 128/203 (63%), Positives = 140/203 (68%)
Frame = -1 / -3
Query: 687 KSGSSMLSKRRSNMIRYTLLYIMSCRRRRSTIPSVAALGXXXXXXXXXXXXXSQPWRYCC 508
KSGS+ +S RRSNM+R LYIMSC RR+T P VAA G S P R C
Sbjct: 668 KSGSATVSNRRSNMMRNMSLYIMSCSLRRTTTPLVAAAGSALRSSTTSRASSSHPTRXCA 489
Query: 507 TTLLVKKGTVMMRRILRQWSPYTVNTMSCPLSVKMSKTTLRVREPNSTPCVWSTSRASGG 328
TTLLVKKGTVM+RRILRQWSPYTVNTMSCPL VKMSKTTLRVREPNSTP VW TS AS G
Sbjct: 488 TTLLVKKGTVMIRRILRQWSPYTVNTMSCPLPVKMSKTTLRVREPNSTPWVWRTSLASSG 309
Query: 327 DETTTRLRCPIRRRKTSPNLRDSAARLRWLRSSPTCSQFPKXXXXXXXXGSRSLRPRILD 148
ETTTRLR P+RRR TSPN RLRWLRSSPTCSQ P G R P L
Sbjct: 308 LETTTRLRTPMRRRNTSPNRLARPIRLRWLRSSPTCSQLPTMGAPEGPGGRRKRLPASLA 129
Query: 147 TAMATMTDAKRPTRSFSTKRRTM 79
TAMA+ AKRP+R+FS +R ++
Sbjct: 128 TAMASTAAAKRPSRAFSRRRTSI 60
Score = 179 bits (385), Expect(2) = 3e-052
Identities = 88/155 (56%), Positives = 96/155 (61%)
Frame = -3 / -2
Query: 508 HDLVGEEGHGHDAAHLAPVVAVHGEHHVLPLVREDVEDHVAGAGAELHALRVEHLPRQRR 329
H LVGEEGH HD HLAPVVAVH EHHVL L EDVED VAGAGAEL AL VE L +
Sbjct: 489 HHLVGEEGHRHDPPHLAPVVAVHREHHVLSLAGEDVEDDVAGAGAELDALGVEDLLGELG 310
Query: 328 RRDHHQVALPHPEEEDVAELAGQRGEVAVVEVVADLQPVPEDGHGDGAGRQPELAATDLX 149
D HQVA H EEE +AE GQ +VAVVEVVADLQPV +DG GAG + E A +L
Sbjct: 309 AGDDHQVADAHAEEEHLAEPLGQAHQVAVVEVVADLQPVADDGGAGGAGWEAEALAGELG 130
Query: 148 XXXXXXXXRQEADQELLHEEKDHGDGAEMEGGLAC 44
+EA Q LL EE H + G AC
Sbjct: 129 YGDGQHRRGEEAQQGLLQEEDVHRGVGAVCGSCAC 25
Score = 92.3 bits (195), Expect(2) = 8e-023
Identities = 37/44 (84%), Positives = 37/44 (84%)
Frame = +1 / +3
Query: 370 VRLPHPQRGLRHLHGQGAGHGVHRVRRPLAQDAPHHDRALLHQQ 501
VRLPHPQR LRHLH QG GHGVH VRRPLAQDA HD ALLHQQ
Sbjct: 351 VRLPHPQRRLRHLHRQGTGHGVHGVRRPLAQDAADHDGALLHQQ 482
Score = 47.8 bits (98), Expect(2) = 3e-052
Identities = 18/32 (56%), Positives = 23/32 (71%)
Frame = -3 / -2
Query: 673 HALEAPVEHDPVYVVVHHELQASAEHDSVGGR 578
H LE VEHD +VVVHHELQ ++ H ++G R
Sbjct: 654 HGLEPAVEHDAEHVVVHHELQLASHHHALGRR 559
Score = 35.9 bits (72), Expect(2) = 8e-023
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = +1 / +3
Query: 613 AAHDVQQRIPDHVRPALRE 669
AAHDVQ+ +P HVRP +R+
Sbjct: 594 AAHDVQRHVPHHVRPPVRD 650
Score = 33.6 bits (67), Expect = 3.5
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +1 / -1
Query: 61 PSPPRRHGPSLRGEAPGRPLGVRHG 135
P+PPRR GP+ GRP G R G
Sbjct: 118 PAPPRRRGPAGPSPGGGRPSGGRRG 44
Score = 33.1 bits (66), Expect = 4.8
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = +3 / +2
Query: 423 RTWCSPCTATTG 458
RTWCS CTATTG
Sbjct: 404 RTWCSRCTATTG 439
>gb|AL504527.1|AL504527 AL504527 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW05I23V 5', mRNA sequence
Length = 667
Score = 182 bits (393), Expect(2) = 7e-087
Identities = 73/93 (78%), Positives = 84/93 (90%)
Frame = +2 / +2
Query: 902 LKCAIDHILEAQQKGEINEDNVLFIVENINVAAIETTLWSIEWAVAELVNHPEIQQKLRQ 1081
+KCA+DHILEA++KGEIN DNVL+IVENINVAAIETTLWSIEW +AELVNHPEIQQKLR+
Sbjct: 314 IKCAMDHILEAERKGEINHDNVLYIVENINVAAIETTLWSIEWGLAELVNHPEIQQKLRE 493
Query: 1082 ELDTVLGPGHQITEPDTHNLPYLQAVIKETLRL 1180
E+ VLGPG +TEPD LPYLQ+V+KETLRL
Sbjct: 494 EIVAVLGPGTPVTEPDLERLPYLQSVVKETLRL 592
Score = 159 bits (342), Expect(2) = 7e-087
Identities = 62/96 (64%), Positives = 82/96 (85%)
Frame = +2 / +2
Query: 581 ATDGIVLRRRLQLMMYNNVYRIMFDRRFESMDDPLFLRLRALNGERSRLAQSFEYNYGDF 760
AT G+V+RRRLQ MMYN+++RIMFDRRFE++ DPLF +L+ALN ERS L+QSF+YNYGDF
Sbjct: 5 ATKGVVVRRRLQXMMYNDMFRIMFDRRFETVADPLFNQLKALNAERSILSQSFDYNYGDF 184
Query: 761 IPILRPFLRGYLRVCKEVKETRLKLFKDFFLEERKK 868
IP+LRPFLR YL C +K R+K+F+D F+++RK+
Sbjct: 185 IPVLRPFLRRYLNRCTNLKTKRMKVFEDHFVQQRKE 292
Score = 146 bits (314), Expect(3) = 4e-047
Identities = 69/98 (70%), Positives = 72/98 (73%)
Frame = -1 / -2
Query: 1197 SGMAIRSRSVSLITACR*GRLCVSGSVIWWPGPSTVSSSCRSFCWISGWFTSSATAHSID 1018
+G RSVS T CR*GR SGSV PGPST + S RSFCWISGWFTSSA HSID
Sbjct: 609 AGWPCGRRSVSFTTDCR*GRRSRSGSVTGVPGPSTATISSRSFCWISGWFTSSARPHSID 430
Query: 1017 HSVVSIAATLMFSTMKSTLSSLISPFCCASSM*SMAHL 904
HSVVS+AATLMFSTM TLS LISPF AS M SMAHL
Sbjct: 429 HSVVSMAATLMFSTM*RTLSWLISPFLSASRMWSMAHL 316
Score = 58.8 bits (122), Expect(3) = 4e-047
Identities = 30/60 (50%), Positives = 34/60 (56%)
Frame = -1 / -2
Query: 759 KSP*LYSKLCXXXXXXXXXXXXXRKSGSSMLSKRRSNMIRYTLLYIMSCRRRRSTIPSVA 580
KSP*L SKL KSGS+ +S RRSNM+R LYIM C RR+T P VA
Sbjct: 183 KSP*L*SKLWERMLRSALSALSWLKSGSATVSNRRSNMMRNMSLYIMXCSLRRTTTPLVA 4
Score = 55.6 bits (115), Expect(2) = 2e-010
Identities = 27/42 (64%), Positives = 27/42 (64%)
Frame = +1 / +1
Query: 904 QVRH*SHTGGTAEG*DQRGQRALHRREH*RCSDRDHAVVDRV 1029
QVRH H G EG DQ QR LHRREH R S D AVVDRV
Sbjct: 316 QVRHGPHPGSRKEGRDQPRQRPLHRREHQRRSH*DDAVVDRV 441
Score = 49.2 bits (101), Expect(2) = 2e-011
Identities = 26/63 (41%), Positives = 32/63 (50%)
Frame = -3 / -1
Query: 1180 QPQRLLDHRLQVGEXXXXXXXXXXXRPEHRVXXXXXXXXXLRVVHQLSDRPLDRPQRGLD 1001
+ +RLL LQVGE R +H LRVVHQL + PLDRPQR L+
Sbjct: 592 EAERLLHDGLQVGEALQVRLRHRRARAQHGDDLLAQLLLDLRVVHQLREAPLDRPQRRLN 413
Query: 1000 RCN 992
C+
Sbjct: 412 GCD 404
Score = 43.7 bits (89), Expect(2) = 2e-011
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = -3 / -1
Query: 673 HALEAPVEHDPVYVVVHHELQASAEHDSVG 584
H LE VEHD +VVVHH LQ ++ H ++G
Sbjct: 97 HGLEPAVEHDAEHVVVHHXLQPASHHHALG 8
Score = 34.1 bits (68), Expect(2) = 2e-010
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +1 / +1
Query: 613 AAHDVQQRIPDHVRPALRE 669
A HDVQ+ +P HVRP +R+
Sbjct: 37 AXHDVQRHVPHHVRPPVRD 93
Score = 22.6 bits (43), Expect(3) = 4e-047
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -3 / -1
Query: 793 VAAEERTEDGD 761
VAAEE EDGD
Sbjct: 217 VAAEEGAEDGD 185
>gb|BF260290.3|BF260290 HVSMEf0021J18f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEf0021J18f, mRNA sequence
Length = 834
Score = 262 bits (566), Expect(3) = 7e-086
Identities = 107/133 (80%), Positives = 120/133 (90%)
Frame = +2 / +1
Query: 902 LKCAIDHILEAQQKGEINEDNVLFIVENINVAAIETTLWSIEWAVAELVNHPEIQQKLRQ 1081
+KCA+DHILEA++KGEIN DNVL+IVENINVAAIETTLWSIEW +AELVNHPEIQQKLR+
Sbjct: 163 IKCAMDHILEAERKGEINHDNVLYIVENINVAAIETTLWSIEWGLAELVNHPEIQQKLRE 342
Query: 1082 ELDTVLGPGHQITEPDTHNLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAES 1261
E+ VLGPG TEPD LPYLQ+V+KETLRLRMAIPLLVPHMNL DAKL GY+IPAES
Sbjct: 343 EIVAVLGPGTPETEPDLERLPYLQSVVKETLRLRMAIPLLVPHMNLSDAKLAGYNIPAES 522
Query: 1262 KILVNAWYLANNP 1300
KIL NAW+LAN+P
Sbjct: 523 KILGNAWFLANDP 561
Score = 200 bits (432), Expect = 2e-050
Identities = 96/129 (74%), Positives = 99/129 (76%)
Frame = -1 / -2
Query: 1290 ARYQALTRILLSAGMSXPPSLASWRFMCGTSSGMAIRSRSVSLITACR*GRLCVSGSVIW 1111
AR QAL RIL SAGM P SLAS RFMCGT SGMA+R RSVS T CR*GR SGSV
Sbjct: 551 ARNQALPRILDSAGML*PASLASLRFMCGTRSGMAMRRRSVSFTTDCR*GRRSRSGSVSG 372
Query: 1110 WPGPSTVSSSCRSFCWISGWFTSSATAHSIDHSVVSIAATLMFSTMKSTLSSLISPFCCA 931
PGPST + S RSFCWISGWFTSSA HSIDHSVVS+AATLMFSTM TLS LISPF A
Sbjct: 371 VPGPSTATISSRSFCWISGWFTSSARPHSIDHSVVSMAATLMFSTM*RTLSWLISPFLSA 192
Query: 930 SSM*SMAHL 904
S M SMAHL
Sbjct: 191 SRMWSMAHL 165
Score = 95.0 bits (201), Expect = 1e-018
Identities = 44/88 (50%), Positives = 52/88 (59%)
Frame = -3 / -1
Query: 1255 GGDVVXAELGVVEVHVRHQQRDGHPQPQRLLDHRLQVGEXXXXXXXXXXXRPEHRVXXXX 1076
GGDVV ELG+ VHVRHQ+RDGH + +RLL LQVGE R +H
Sbjct: 516 GGDVVTGELGIA*VHVRHQERDGHAEAERLLHDGLQVGEALQVRLRLRRARAQHGDDLLA 337
Query: 1075 XXXXXLRVVHQLSDRPLDRPQRGLDRCN 992
LRVVHQL + PLDRPQR L+ C+
Sbjct: 336 QLLLDLRVVHQLREAPLDRPQRRLNGCD 253
Score = 72.5 bits (152), Expect(3) = 7e-086
Identities = 27/47 (57%), Positives = 37/47 (78%)
Frame = +2 / +1
Query: 728 AQSFEYNYGDFIPILRPFLRGYLRVCKEVKETRLKLFKDFFLEERKK 868
+QSF+YNYGDFIP+LRPFLR YL C +K R+ F+D F+++RK+
Sbjct: 1 SQSFDYNYGDFIPVLRPFLRRYLNRCTNLKTKRM**FEDHFVQQRKE 141
Score = 55.6 bits (115), Expect = 8e-007
Identities = 27/42 (64%), Positives = 27/42 (64%)
Frame = +1 / +3
Query: 904 QVRH*SHTGGTAEG*DQRGQRALHRREH*RCSDRDHAVVDRV 1029
QVRH H G EG DQ QR LHRREH R S D AVVDRV
Sbjct: 165 QVRHGPHPGSRKEGRDQPRQRPLHRREHQRRSH*DDAVVDRV 290
Score = 23.5 bits (45), Expect(3) = 7e-086
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +2 / +2
Query: 1367 ANGNDFRYLPFGVGRR 1414
A+G DFR PFG G++
Sbjct: 629 AHGKDFRGGPFGRGQQ 676
>gb|AV917422.1|AV917422 AV917422 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags18n15 5', mRNA sequence
Length = 619
Score = 182 bits (391), Expect(2) = 4e-085
Identities = 74/123 (60%), Positives = 94/123 (76%)
Frame = +2 / +2
Query: 500 KVVQQYRHGWXXXXXXXXXXXRLDPKAATDGIVLRRRLQLMMYNNVYRIMFDRRFESMDD 679
KVV Q R GW R DP AAT G+V+RRRLQLMMYN+++RIMFDRRFE++ D
Sbjct: 2 KVVAQNRVGWEEEARLVVEDLRADPAAATKGVVVRRRLQLMMYNDMFRIMFDRRFETVAD 181
Query: 680 PLFLRLRALNGERSRLAQSFEYNYGDFIPILRPFLRGYLRVCKEVKETRLKLFKDFFLEE 859
PLF +L+ALN ERS L+QSF+YNYGDFIP+LRPFLR YL C +K R+K+F+D F+++
Sbjct: 182 PLFNQLKALNAERSILSQSFDYNYGDFIPVLRPFLRRYLNRCTNLKTKRMKVFEDHFVQQ 361
Query: 860 RKK 868
RK+
Sbjct: 362 RKE 370
Score = 154 bits (331), Expect(2) = 4e-085
Identities = 61/76 (80%), Positives = 70/76 (92%)
Frame = +2 / +2
Query: 902 LKCAIDHILEAQQKGEINEDNVLFIVENINVAAIETTLWSIEWAVAELVNHPEIQQKLRQ 1081
+KCA+DHILEA++KGEIN DNVL+IVENINVAAIETTLWSIEW +AELVNHPEIQQKLR+
Sbjct: 392 IKCAMDHILEAERKGEINHDNVLYIVENINVAAIETTLWSIEWGLAELVNHPEIQQKLRE 571
Query: 1082 ELDTVLGPGHQITEPD 1129
E+ VLGPG +TEPD
Sbjct: 572 EIVAVLGPGTPVTEPD 619
Score = 128 bits (274), Expect(3) = 6e-048
Identities = 58/75 (77%), Positives = 60/75 (80%)
Frame = -1 / -2
Query: 1128 SGSVIWWPGPSTVSSSCRSFCWISGWFTSSATAHSIDHSVVSIAATLMFSTMKSTLSSLI 949
SGSV PGPST + S RSFCWISGWFTSSA HSIDHSVVS+AATLMFSTM TLS LI
Sbjct: 618 SGSVTGVPGPSTATISSRSFCWISGWFTSSARPHSIDHSVVSMAATLMFSTM*RTLSWLI 439
Query: 948 SPFCCASSM*SMAHL 904
SPF AS M SMAHL
Sbjct: 438 SPFLSASRMWSMAHL 394
Score = 79.9 bits (168), Expect(3) = 6e-048
Identities = 40/87 (45%), Positives = 45/87 (51%)
Frame = -1 / -2
Query: 759 KSP*LYSKLCXXXXXXXXXXXXXRKSGSSMLSKRRSNMIRYTLLYIMSCRRRRSTIPSVA 580
KSP*L SKL KSGS+ +S RRSNM+R LYIMSC RR+T P VA
Sbjct: 261 KSP*L*SKLWERMLRSALSALSWLKSGSATVSNRRSNMMRNMSLYIMSCSLRRTTTPLVA 82
Query: 579 ALGXXXXXXXXXXXXXSQPWRYCCTTL 499
A G S P R+C TTL
Sbjct: 81 AAGSALRSSTTSRASSSHPTRFCATTL 1
Score = 55.6 bits (115), Expect(2) = 5e-011
Identities = 27/42 (64%), Positives = 27/42 (64%)
Frame = +1 / +1
Query: 904 QVRH*SHTGGTAEG*DQRGQRALHRREH*RCSDRDHAVVDRV 1029
QVRH H G EG DQ QR LHRREH R S D AVVDRV
Sbjct: 394 QVRHGPHPGSRKEGRDQPRQRPLHRREHQRRSH*DDAVVDRV 519
Score = 47.8 bits (98), Expect(2) = 9e-010
Identities = 18/32 (56%), Positives = 23/32 (71%)
Frame = -3 / -1
Query: 673 HALEAPVEHDPVYVVVHHELQASAEHDSVGGR 578
H LE VEHD +VVVHHELQ ++ H ++G R
Sbjct: 175 HGLEPAVEHDAEHVVVHHELQPASHHHALGRR 80
Score = 39.6 bits (80), Expect(2) = 9e-010
Identities = 15/22 (68%), Positives = 18/22 (81%)
Frame = -3 / -1
Query: 1057 RVVHQLSDRPLDRPQRGLDRCN 992
RVVHQL + PLDRPQR L+ C+
Sbjct: 547 RVVHQLREAPLDRPQRRLNGCD 482
Score = 35.9 bits (72), Expect(2) = 5e-011
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = +1 / +1
Query: 613 AAHDVQQRIPDHVRPALRE 669
AAHDVQ+ +P HVRP +R+
Sbjct: 115 AAHDVQRHVPHHVRPPVRD 171
Score = 22.6 bits (43), Expect(3) = 6e-048
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -3 / -1
Query: 793 VAAEERTEDGD 761
VAAEE EDGD
Sbjct: 295 VAAEEGAEDGD 263
>gb|AL505149.1|AL505149 AL505149 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW07I21V 5', mRNA sequence
Length = 568
Score = 313 bits (678), Expect = 2e-084
Identities = 130/167 (77%), Positives = 144/167 (86%)
Frame = +2 / +2
Query: 209 GNWLQVGDDLNHRNLAALSRKFGDVFLLRMGQRNLVVVSSPPLAREVLHTQGVEFGSRTR 388
GNWLQVGDDLNHRNL L+++FG+VFLLRMG RNLVVVSSP LA+EVLHTQGVEFGSRTR
Sbjct: 44 GNWLQVGDDLNHRNLMGLAKRFGEVFLLRMGVRNLVVVSSPELAKEVLHTQGVEFGSRTR 223
Query: 389 NVVFDIFTDKGQDMVFTVYGDHWRKMRRIMTVPFFTNKVVQQYRHGWXXXXXXXXXXXRL 568
NVVFDIFT KGQDMVFTVYGDHWRKMRRIMTVPFFTNKVV Q R GW R
Sbjct: 224 NVVFDIFTGKGQDMVFTVYGDHWRKMRRIMTVPFFTNKVVAQNRXGWXEEARLVVEDLRA 403
Query: 569 DPKAATDGIVLRRRLQLMMYNNVYRIMFDRRFESMDDPLFLRLRALN 709
DP AAT G+V+RRRLQLMMYN+++RIMFDRRFE++ DPLF +L+ALN
Sbjct: 404 DPAAATKGVVVRRRLQLMMYNDMFRIMFDRRFETVADPLFNQLKALN 544
Score = 257 bits (555), Expect = 2e-067
Identities = 111/160 (69%), Positives = 118/160 (73%)
Frame = -1 / -2
Query: 687 KSGSSMLSKRRSNMIRYTLLYIMSCRRRRSTIPSVAALGXXXXXXXXXXXXXSQPWRYCC 508
KSGS+ +S RRSNM+R LYIMSC RR+T P VAA G P R+C
Sbjct: 522 KSGSATVSNRRSNMMRNMSLYIMSCSLRRTTTPLVAAAGSALRSSTTSRASSXHPXRFCA 343
Query: 507 TTLLVKKGTVMMRRILRQWSPYTVNTMSCPLSVKMSKTTLRVREPNSTPCVWSTSRASGG 328
TTLLVKKGTVM+RRILRQWSPYTVNTMSCPL VKMSKTTLRVREPNSTP VW TS AS G
Sbjct: 342 TTLLVKKGTVMIRRILRQWSPYTVNTMSCPLPVKMSKTTLRVREPNSTPWVWRTSLASSG 163
Query: 327 DETTTRLRCPIRRRKTSPNLRDSAARLRWLRSSPTCSQFP 208
ETTTRLR P+RRR TSPN RLRWLRSSPTCSQ P
Sbjct: 162 LETTTRLRTPMRRRNTSPNRLARPIRLRWLRSSPTCSQLP 43
Score = 159 bits (342), Expect(2) = 2e-046
Identities = 74/109 (67%), Positives = 78/109 (71%)
Frame = -3 / -1
Query: 508 HDLVGEEGHGHDAAHLAPVVAVHGEHHVLPLVREDVEDHVAGAGAELHALRVEHLPRQRR 329
H LVGEEGH HD HLAPVVAVH EHHVL L EDVED VAGAGAEL AL VE L +
Sbjct: 343 HHLVGEEGHRHDPPHLAPVVAVHREHHVLSLAGEDVEDDVAGAGAELDALGVEDLLGELG 164
Query: 328 RRDHHQVALPHPEEEDVAELAGQRGEVAVVEVVADLQPVPEDGHGDGAG 182
D HQVA H EEE +AE GQ +VAVVEVVADLQPV +DG GAG
Sbjct: 163 AGDDHQVADAHAEEEHLAEPLGQAHQVAVVEVVADLQPVADDGGAGGAG 17
Score = 92.3 bits (195), Expect(2) = 8e-023
Identities = 37/44 (84%), Positives = 37/44 (84%)
Frame = +1 / +1
Query: 370 VRLPHPQRGLRHLHGQGAGHGVHRVRRPLAQDAPHHDRALLHQQ 501
VRLPHPQR LRHLH QG GHGVH VRRPLAQDA HD ALLHQQ
Sbjct: 205 VRLPHPQRRLRHLHRQGTGHGVHGVRRPLAQDAADHDGALLHQQ 336
Score = 47.8 bits (98), Expect(2) = 2e-046
Identities = 18/32 (56%), Positives = 23/32 (71%)
Frame = -3 / -1
Query: 673 HALEAPVEHDPVYVVVHHELQASAEHDSVGGR 578
H LE VEHD +VVVHHELQ ++ H ++G R
Sbjct: 508 HGLEPAVEHDAEHVVVHHELQPASHHHALGRR 413
Score = 35.9 bits (72), Expect(2) = 8e-023
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = +1 / +1
Query: 613 AAHDVQQRIPDHVRPALRE 669
AAHDVQ+ +P HVRP +R+
Sbjct: 448 AAHDVQRHVPHHVRPPVRD 504
Score = 33.1 bits (66), Expect = 4.8
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = +3 / +3
Query: 423 RTWCSPCTATTG 458
RTWCS CTATTG
Sbjct: 258 RTWCSRCTATTG 293
>gb|AV913914.1|AV913914 AV913914 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags23l19 5', mRNA sequence
Length = 561
Score = 259 bits (559), Expect(2) = 4e-084
Identities = 105/127 (82%), Positives = 116/127 (91%)
Frame = +2 / +2
Query: 902 LKCAIDHILEAQQKGEINEDNVLFIVENINVAAIETTLWSIEWAVAELVNHPEIQQKLRQ 1081
+KCA+DHILEA++KGEIN DNVL+IVENINVAAIETTLWSIEW +AELVNHPEIQQKLR+
Sbjct: 179 IKCAMDHILEAERKGEINHDNVLYIVENINVAAIETTLWSIEWGLAELVNHPEIQQKLRE 358
Query: 1082 ELDTVLGPGHQITEPDTHNLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAES 1261
E+ VLGPG +TEPD LPYLQ+V+KETLRLRMAIPLLVPHMNL DAKL GYDIPAES
Sbjct: 359 EIVAVLGPGTPVTEPDLERLPYLQSVVKETLRLRMAIPLLVPHMNLSDAKLAGYDIPAES 538
Query: 1262 KILVNAW 1282
KILVNAW
Sbjct: 539 KILVNAW 559
Score = 203 bits (438), Expect(2) = 5e-052
Identities = 96/126 (76%), Positives = 99/126 (78%)
Frame = -1 / -1
Query: 1281 QALTRILLSAGMSXPPSLASWRFMCGTSSGMAIRSRSVSLITACR*GRLCVSGSVIWWPG 1102
QALTRIL SAGMS P SLAS RFMCGT SGMA+R RSVS T CR*GR SGSV PG
Sbjct: 558 QALTRILDSAGMS*PASLASLRFMCGTRSGMAMRRRSVSFTTDCR*GRRSRSGSVTGVPG 379
Query: 1101 PSTVSSSCRSFCWISGWFTSSATAHSIDHSVVSIAATLMFSTMKSTLSSLISPFCCASSM 922
PST + S RSFCWISGWFTSSA HSIDHSVVS+AATLMFSTM TLS LISPF AS M
Sbjct: 378 PSTATISSRSFCWISGWFTSSARPHSIDHSVVSMAATLMFSTM*RTLSWLISPFLSASRM 199
Query: 921 *SMAHL 904
SMAHL
Sbjct: 198 WSMAHL 181
Score = 99.1 bits (210), Expect = 7e-020
Identities = 45/88 (51%), Positives = 53/88 (60%)
Frame = -3 / -3
Query: 1255 GGDVVXAELGVVEVHVRHQQRDGHPQPQRLLDHRLQVGEXXXXXXXXXXXRPEHRVXXXX 1076
GGDVV ELG+ EVHVRHQ+RDGH + +RLL LQVGE R +H
Sbjct: 532 GGDVVTGELGIAEVHVRHQERDGHAEAERLLHDGLQVGEALQVRLRHRRARAQHGDDLLA 353
Query: 1075 XXXXXLRVVHQLSDRPLDRPQRGLDRCN 992
LRVVHQL + PLDRPQR L+ C+
Sbjct: 352 QLLLDLRVVHQLREAPLDRPQRRLNGCD 269
Score = 74.4 bits (156), Expect(2) = 4e-084
Identities = 26/44 (59%), Positives = 36/44 (81%)
Frame = +2 / +2
Query: 737 FEYNYGDFIPILRPFLRGYLRVCKEVKETRLKLFKDFFLEERKK 868
F+YNYGDFIP+LRPFLR YL C +K R+K+F+D F+++RK+
Sbjct: 26 FDYNYGDFIPVLRPFLRRYLNRCTNLKTKRMKVFEDHFVQQRKE 157
Score = 55.6 bits (115), Expect = 8e-007
Identities = 27/42 (64%), Positives = 27/42 (64%)
Frame = +1 / +1
Query: 904 QVRH*SHTGGTAEG*DQRGQRALHRREH*RCSDRDHAVVDRV 1029
QVRH H G EG DQ QR LHRREH R S D AVVDRV
Sbjct: 181 QVRHGPHPGSRKEGRDQPRQRPLHRREHQRRSH*DDAVVDRV 306
Score = 22.6 bits (43), Expect(2) = 5e-052
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -3 / -3
Query: 793 VAAEERTEDGD 761
VAAEE EDGD
Sbjct: 82 VAAEEGAEDGD 50
>gb|BE519761.3|BE519761 HV_CEb0021C04f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0021C04f, mRNA sequence
Length = 706
Score = 270 bits (584), Expect(3) = 1e-083
Identities = 109/135 (80%), Positives = 122/135 (90%)
Frame = +2 / +1
Query: 902 LKCAIDHILEAQQKGEINEDNVLFIVENINVAAIETTLWSIEWAVAELVNHPEIQQKLRQ 1081
+KCA+DHILEA++KGEIN DNVL+IVENINVAAIETTLWSIEW +AELVNHPEIQQKLR+
Sbjct: 97 IKCAMDHILEAERKGEINHDNVLYIVENINVAAIETTLWSIEWGLAELVNHPEIQQKLRE 276
Query: 1082 ELDTVLGPGHQITEPDTHNLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAES 1261
E+ VLGPG +TEPD LPYLQ+V+KETLRLRMAIPLLVPHMNL DAKL GYDIPAES
Sbjct: 277 EIVAVLGPGTPVTEPDLERLPYLQSVVKETLRLRMAIPLLVPHMNLSDAKLAGYDIPAES 456
Query: 1262 KILVNAWYLANNPDS 1306
KILVNAW+LAN P +
Sbjct: 457 KILVNAWFLANEPQA 501
Score = 206 bits (445), Expect(2) = 2e-067
Identities = 98/129 (75%), Positives = 101/129 (78%)
Frame = -1 / -3
Query: 1290 ARYQALTRILLSAGMSXPPSLASWRFMCGTSSGMAIRSRSVSLITACR*GRLCVSGSVIW 1111
AR QALTRIL SAGMS P SLAS RFMCGT SGMA+R RSVS T CR*GR SGSV
Sbjct: 485 ARNQALTRILDSAGMS*PASLASLRFMCGTRSGMAMRRRSVSFTTDCR*GRRSRSGSVTG 306
Query: 1110 WPGPSTVSSSCRSFCWISGWFTSSATAHSIDHSVVSIAATLMFSTMKSTLSSLISPFCCA 931
PGPST + S RSFCWISGWFTSSA HSIDHSVVS+AATLMFSTM TLS LISPF A
Sbjct: 305 VPGPSTATISSRSFCWISGWFTSSARPHSIDHSVVSMAATLMFSTM*RTLSWLISPFLSA 126
Query: 930 SSM*SMAHL 904
S M SMAHL
Sbjct: 125 SRMWSMAHL 99
Score = 99.1 bits (210), Expect = 7e-020
Identities = 45/88 (51%), Positives = 53/88 (60%)
Frame = -3 / -2
Query: 1255 GGDVVXAELGVVEVHVRHQQRDGHPQPQRLLDHRLQVGEXXXXXXXXXXXRPEHRVXXXX 1076
GGDVV ELG+ EVHVRHQ+RDGH + +RLL LQVGE R +H
Sbjct: 450 GGDVVTGELGIAEVHVRHQERDGHAEAERLLHDGLQVGEALQVRLRHRRARAQHGDDLLA 271
Query: 1075 XXXXXLRVVHQLSDRPLDRPQRGLDRCN 992
LRVVHQL + PLDRPQR L+ C+
Sbjct: 270 QLLLDLRVVHQLREAPLDRPQRRLNGCD 187
Score = 70.7 bits (148), Expect(2) = 2e-067
Identities = 32/50 (64%), Positives = 33/50 (66%)
Frame = -1 / -2
Query: 1503 PGGGSSSKFWTRRPMVMPRMGRARMIPGQLLRPTPKGRYLKSLPLASTCF 1354
P + S F TR P VMP MG ARMIPGQL R TPKG KSLP AST F
Sbjct: 699 PAAAAGSNFCTRGPSVMPMMGSARMIPGQLRRRTPKGTNRKSLPWASTDF 550
Score = 57.0 bits (118), Expect(3) = 1e-083
Identities = 26/64 (40%), Positives = 29/64 (45%)
Frame = +2 / +2
Query: 1295 NPDSWXXXXXXXXXXXXXXXKHVEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLV 1474
NP W K VEA+GNDFR++PFGV RRSCP LV
Sbjct: 491 NPKRWVRADEFMPERFLEEEKSVEAHGNDFRFVPFGVRRRSCPGIILALPIIGITLGPLV 670
Query: 1475 QNFE 1486
Q FE
Sbjct: 671 QKFE 682
Score = 55.6 bits (115), Expect = 8e-007
Identities = 27/42 (64%), Positives = 27/42 (64%)
Frame = +1 / +3
Query: 904 QVRH*SHTGGTAEG*DQRGQRALHRREH*RCSDRDHAVVDRV 1029
QVRH H G EG DQ QR LHRREH R S D AVVDRV
Sbjct: 99 QVRHGPHPGSRKEGRDQPRQRPLHRREHQRRSH*DDAVVDRV 224
Score = 23.5 bits (45), Expect(3) = 1e-083
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +2 / +3
Query: 1475 QNFELLPPPGQ 1507
+N LLPPPGQ
Sbjct: 672 KNSSLLPPPGQ 704
>gb|BJ463086.1|BJ463086 BJ463086 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags25l03 5', mRNA sequence
Length = 570
Score = 178 bits (384), Expect(2) = 2e-079
Identities = 71/91 (78%), Positives = 82/91 (90%)
Frame = +2 / +1
Query: 902 LKCAIDHILEAQQKGEINEDNVLFIVENINVAAIETTLWSIEWAVAELVNHPEIQQKLRQ 1081
+KCA+DHILEA++KGEIN DNVL+IVENINVAAIETTLWSIEW +AELVNHPEIQQKLR+
Sbjct: 298 IKCAMDHILEAERKGEINHDNVLYIVENINVAAIETTLWSIEWGLAELVNHPEIQQKLRE 477
Query: 1082 ELDTVLGPGHQITEPDTHNLPYLQAVIKETL 1174
E+ VLGPG +TEPD LPYLQ+V+KETL
Sbjct: 478 EIVAVLGPGTPVTEPDLERLPYLQSVVKETL 570
Score = 144 bits (308), Expect(3) = 1e-041
Identities = 67/90 (74%), Positives = 69/90 (76%)
Frame = -1 / -2
Query: 1173 SVSLITACR*GRLCVSGSVIWWPGPSTVSSSCRSFCWISGWFTSSATAHSIDHSVVSIAA 994
SVS T CR*GR SGSV PGPST + S RSFCWISGWFTSSA HSIDHSVVS+AA
Sbjct: 569 SVSFTTDCR*GRRSRSGSVTGVPGPSTATISSRSFCWISGWFTSSARPHSIDHSVVSMAA 390
Query: 993 TLMFSTMKSTLSSLISPFCCASSM*SMAHL 904
TLMFSTM TLS LISPF AS M SMAHL
Sbjct: 389 TLMFSTM*RTLSWLISPFLSASRMWSMAHL 300
Score = 138 bits (297), Expect(2) = 2e-079
Identities = 53/83 (63%), Positives = 71/83 (85%)
Frame = +2 / +1
Query: 620 MMYNNVYRIMFDRRFESMDDPLFLRLRALNGERSRLAQSFEYNYGDFIPILRPFLRGYLR 799
MMYN+++RIMFDRRFE++ DPLF +L+ALN ERS L+QSF+YNYGDFIP+LRPFLR YL
Sbjct: 28 MMYNDMFRIMFDRRFETVADPLFNQLKALNAERSILSQSFDYNYGDFIPVLRPFLRRYLN 207
Query: 800 VCKEVKETRLKLFKDFFLEERKK 868
C +K R+K+F+D F+++RK+
Sbjct: 208 RCTNLKTKRMKVFEDHFVQQRKE 276
Score = 55.6 bits (115), Expect(2) = 3e-009
Identities = 27/42 (64%), Positives = 27/42 (64%)
Frame = +1 / +3
Query: 904 QVRH*SHTGGTAEG*DQRGQRALHRREH*RCSDRDHAVVDRV 1029
QVRH H G EG DQ QR LHRREH R S D AVVDRV
Sbjct: 300 QVRHGPHPGSRKEGRDQPRQRPLHRREHQRRSH*DDAVVDRV 425
Score = 48.7 bits (100), Expect(2) = 2e-008
Identities = 26/61 (42%), Positives = 31/61 (50%)
Frame = -3 / -1
Query: 1174 QRLLDHRLQVGEXXXXXXXXXXXRPEHRVXXXXXXXXXLRVVHQLSDRPLDRPQRGLDRC 995
+RLL LQVGE R +H LRVVHQL + PLDRPQR L+ C
Sbjct: 570 ERLLHDGLQVGEALQVRLRHRRARAQHGDDLLAQLLLDLRVVHQLREAPLDRPQRRLNGC 391
Query: 994 N 992
+
Sbjct: 390 D 388
Score = 42.8 bits (87), Expect(3) = 1e-041
Identities = 23/52 (44%), Positives = 28/52 (53%)
Frame = -1 / -2
Query: 759 KSP*LYSKLCXXXXXXXXXXXXXRKSGSSMLSKRRSNMIRYTLLYIMSCRRR 604
KSP*L SKL KSGS+ +S RRSNM+R LYI++ R
Sbjct: 167 KSP*L*SKLWERMLRSALSALSWLKSGSATVSNRRSNMMRNMSLYIIAAAPR 12
Score = 33.6 bits (67), Expect(2) = 2e-008
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = -3 / -1
Query: 673 HALEAPVEHDPVYVVVHHELQAS 605
H LE VEHD +VVVHH S
Sbjct: 81 HGLEPAVEHDAEHVVVHHSCSPS 13
Score = 29.9 bits (59), Expect(2) = 3e-009
Identities = 9/18 (50%), Positives = 15/18 (83%)
Frame = +1 / +3
Query: 616 AHDVQQRIPDHVRPALRE 669
++DVQ+ +P HVRP +R+
Sbjct: 24 SYDVQRHVPHHVRPPVRD 77
Score = 22.6 bits (43), Expect(3) = 1e-041
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -3 / -1
Query: 793 VAAEERTEDGD 761
VAAEE EDGD
Sbjct: 201 VAAEEGAEDGD 169
>gb|CA026572.1|CA026572 HZ56E18r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ56E18
5-PRIME, mRNA sequence
Length = 425
Score = 292 bits (633), Expect = 3e-078
Identities = 121/141 (85%), Positives = 126/141 (89%)
Frame = +2 / +2
Query: 299 GQRNLVVVSSPPLAREVLHTQGVEFGSRTRNVVFDIFTDKGQDMVFTVYGDHWRKMRRIM 478
GQRNLVVVSSPPLAREVLHTQGVEFGSRTRNVVFDIFT +GQDMVFTVYGDHWRKMRRIM
Sbjct: 2 GQRNLVVVSSPPLAREVLHTQGVEFGSRTRNVVFDIFTGEGQDMVFTVYGDHWRKMRRIM 181
Query: 479 TVPFFTNKVVQQYRHGWXXXXXXXXXXXRLDPKAATDGIVLRRRLQLMMYNNVYRIMFDR 658
TVPFFTNKVVQQYR GW R DP+AAT+G+VLRR LQLMMYNN+YRIMFDR
Sbjct: 182 TVPFFTNKVVQQYRPGWEAEAAFVVDNVRADPRAATEGVVLRRHLQLMMYNNMYRIMFDR 361
Query: 659 RFESMDDPLFLRLRALNGERS 721
RFESMDDPLFLRLRALNGERS
Sbjct: 362 RFESMDDPLFLRLRALNGERS 424
Score = 235 bits (508), Expect = 5e-061
Identities = 102/130 (78%), Positives = 105/130 (80%)
Frame = -1 / -3
Query: 687 KSGSSMLSKRRSNMIRYTLLYIMSCRRRRSTIPSVAALGXXXXXXXXXXXXXSQPWRYCC 508
KSGSSMLS RRSNM+RY LLYIMSCR RRST PSVAALG S P RYCC
Sbjct: 390 KSGSSMLSNRRSNMMRYMLLYIMSCRWRRSTTPSVAALGSARTLSTTKAASASHPGRYCC 211
Query: 507 TTLLVKKGTVMMRRILRQWSPYTVNTMSCPLSVKMSKTTLRVREPNSTPCVWSTSRASGG 328
TTLLVKKGTVMMRRILRQWSPYTVNTMS P VKMS TTLRVR+PNSTPCV STSRASGG
Sbjct: 210 TTLLVKKGTVMMRRILRQWSPYTVNTMSWPSPVKMSNTTLRVRDPNSTPCVCSTSRASGG 31
Query: 327 DETTTRLRCP 298
D+TTTRLR P
Sbjct: 30 DDTTTRLRWP 1
Score = 145 bits (311), Expect(2) = 6e-048
Identities = 59/69 (85%), Positives = 60/69 (86%)
Frame = -3 / -2
Query: 508 HDLVGEEGHGHDAAHLAPVVAVHGEHHVLPLVREDVEDHVAGAGAELHALRVEHLPRQRR 329
H LVGEEGHGHDA HLAPVVAVHGEHHVL L EDVE HVAGAG ELHALRV+HLPRQRR
Sbjct: 211 HHLVGEEGHGHDAPHLAPVVAVHGEHHVLALAGEDVEHHVAGAGPELHALRVQHLPRQRR 32
Query: 328 RRDHHQVAL 302
R HHQVAL
Sbjct: 31 GRHHHQVAL 5
Score = 101 bits (215), Expect(2) = 3e-032
Identities = 38/44 (86%), Positives = 41/44 (93%)
Frame = +1 / +1
Query: 370 VRLPHPQRGLRHLHGQGAGHGVHRVRRPLAQDAPHHDRALLHQQ 501
VR+PHPQRG+RHLH +G GHGVHRVRRPLAQDA HHDRALLHQQ
Sbjct: 73 VRVPHPQRGVRHLHRRGPGHGVHRVRRPLAQDAAHHDRALLHQQ 204
Score = 67.0 bits (140), Expect(2) = 6e-048
Identities = 26/35 (74%), Positives = 30/35 (85%)
Frame = -3 / -2
Query: 673 HALEAPVEHDPVYVVVHHELQASAEHDSVGGRLGV 569
HALE PVEHD V+VVVHHELQ +AEHD++GG GV
Sbjct: 376 HALEPPVEHDAVHVVVHHELQVAAEHDALGGGPGV 272
Score = 58.3 bits (121), Expect(2) = 3e-032
Identities = 21/26 (80%), Positives = 23/26 (88%)
Frame = +1 / +1
Query: 595 RAPPTPAAHDVQQRIPDHVRPALREH 672
RAPP PAAHDVQQ +P HVRPA+REH
Sbjct: 298 RAPPPPAAHDVQQHVPHHVRPAVREH 375
Score = 39.1 bits (79), Expect = 0.077
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = -2 / -1
Query: 500 CW*RRARS*CGASCAS 453
CW*RRARS*C ASCAS
Sbjct: 203 CW*RRARS*CAASCAS 156
Score = 37.3 bits (75), Expect = 0.27
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +3 / +3
Query: 423 RTWCSPCTATTG 458
RTWCSPCTATTG
Sbjct: 126 RTWCSPCTATTG 161
>gb|BF258169.3|BF258169 HVSMEf0014P23f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEf0014P23f, mRNA sequence
Length = 574
Score = 181 bits (389), Expect(2) = 3e-077
Identities = 74/95 (77%), Positives = 84/95 (88%)
Frame = +2 / +3
Query: 902 LKCAIDHILEAQQKGEINEDNVLFIVENINVAAIETTLWSIEWAVAELVNHPEIQQKLRQ 1081
+KCA+DHILEA++KGEIN DNVL+IVENINVAAIETTLWSIEW +AELVNHPEIQQKLR+
Sbjct: 288 IKCAMDHILEAERKGEINHDNVLYIVENINVAAIETTLWSIEWGLAELVNHPEIQQKLRE 467
Query: 1082 ELDTVLGPGHQITEPDTHNLPYLQAVIKETLRLRM 1186
E+ VLGPG +TEPD LPYLQ+V KETL LRM
Sbjct: 468 EIVAVLGPGTPVTEPDLERLPYLQSVGKETLPLRM 572
Score = 148 bits (318), Expect(3) = 4e-040
Identities = 70/95 (73%), Positives = 73/95 (76%)
Frame = -1 / -1
Query: 1188 AIRSRSVSLITACR*GRLCVSGSVIWWPGPSTVSSSCRSFCWISGWFTSSATAHSIDHSV 1009
A+RS SVS T CR*GR SGSV PGPST + S RSFCWISGWFTSSA HSIDHSV
Sbjct: 574 AMRSGSVSFPTDCR*GRRSRSGSVTGVPGPSTATISSRSFCWISGWFTSSARPHSIDHSV 395
Query: 1008 VSIAATLMFSTMKSTLSSLISPFCCASSM*SMAHL 904
VS+AATLMFSTM TLS LISPF AS M SMAHL
Sbjct: 394 VSMAATLMFSTM*RTLSWLISPFLSASRMWSMAHL 290
Score = 129 bits (276), Expect(2) = 3e-077
Identities = 52/88 (59%), Positives = 68/88 (77%)
Frame = +2 / +3
Query: 605 RRLQLMMYNNVYRIMFDRRFESMDDPLFLRLRALNGERSRLAQSFEYNYGDFIPILRPFL 784
R LQLMMYN++ IM DRR + DPL+ +LRALN ERS L+QSF+YNYGD IP+LRPFL
Sbjct: 3 RTLQLMMYNDMCHIMLDRRI*TAADPLYSQLRALNAERSILSQSFDYNYGDLIPVLRPFL 182
Query: 785 RGYLRVCKEVKETRLKLFKDFFLEERKK 868
R YL C +K R+K+F+D F+++RK+
Sbjct: 183 RRYLNRCTNLKTKRMKVFEDHFVQQRKE 266
Score = 55.6 bits (115), Expect(2) = 4e-009
Identities = 27/42 (64%), Positives = 27/42 (64%)
Frame = +1 / +2
Query: 904 QVRH*SHTGGTAEG*DQRGQRALHRREH*RCSDRDHAVVDRV 1029
QVRH H G EG DQ QR LHRREH R S D AVVDRV
Sbjct: 290 QVRHGPHPGSRKEGRDQPRQRPLHRREHQRRSH*DDAVVDRV 415
Score = 39.6 bits (80), Expect(2) = 3e-005
Identities = 15/22 (68%), Positives = 18/22 (81%)
Frame = -3 / -3
Query: 1057 RVVHQLSDRPLDRPQRGLDRCN 992
RVVHQL + PLDRPQR L+ C+
Sbjct: 443 RVVHQLREAPLDRPQRRLNGCD 378
Score = 33.1 bits (66), Expect(3) = 4e-040
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = -3 / -3
Query: 667 LEAPVEHDPVYVVVHHELQ 611
L+ V+HD +VVVHHELQ
Sbjct: 65 LDPAVQHDVAHVVVHHELQ 9
Score = 32.2 bits (64), Expect(2) = 3e-005
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = -1 / -1
Query: 684 SGSSMLSKRRSNMIRYTLLYIMSCRRR 604
SGS+ + RRSNM+ + LYIMSC R
Sbjct: 82 SGSAAV*IRRSNMMWHMSLYIMSCSVR 2
Score = 29.5 bits (58), Expect(2) = 4e-009
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +1 / +2
Query: 613 AAHDVQQRIPDHVRP 657
AAHDVQ+ +P HV P
Sbjct: 11 AAHDVQRHVPHHVGP 55
Score = 22.6 bits (43), Expect(3) = 4e-040
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -3 / -3
Query: 793 VAAEERTEDGD 761
VAAEE EDGD
Sbjct: 191 VAAEEGAEDGD 159
>gb|BE216506.2|BE216506 HV_CEb0010K21f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0010K21f, mRNA sequence
Length = 702
Score = 285 bits (617), Expect = 5e-076
Identities = 124/193 (64%), Positives = 145/193 (75%)
Frame = +2 / +2
Query: 122 ASVMVAIAVSKIRGRKLRLXXXXXXXXXFGNWLQVGDDLNHRNLAALSRKFGDVFLLRMG 301
A+ ++AIAV+K+ G++ RL GNWLQVGDDLNHRNL L+++FG+VFLLRMG
Sbjct: 107 AAAVLAIAVAKLAGKRFRLPPGPSGAPIVGNWLQVGDDLNHRNLMGLAKRFGEVFLLRMG 286
Query: 302 QRNLVVVSSPPLAREVLHTQGVEFGSRTRNVVFDIFTDKGQDMVFTVYGDHWRKMRRIMT 481
RNLVVVSSP LA+EVLHTQGVEFGSRTRNVVFDIFT KGQDMVFTVYGDHWRKMRRIMT
Sbjct: 287 VRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGDHWRKMRRIMT 466
Query: 482 VPFFTNKVVQQYRHGWXXXXXXXXXXXRLDPKAATDGIVLRRRLQLMMYNNVYRIMFDRR 661
VPFFTNKVV R GW R P A T G+V+R RL LM N++ RIMF+RR
Sbjct: 467 VPFFTNKVVAXNRVGWEEEARLVVEDLRGRPAAGTKGVVVRPRLALMDDNDLVRIMFERR 646
Query: 662 FESMDDPLFLRLR 700
F ++ P+F L+
Sbjct: 647 F*TVGRPVFNPLK 685
Score = 253 bits (547), Expect = 2e-066
Identities = 119/203 (58%), Positives = 132/203 (65%)
Frame = -1 / -1
Query: 687 KSGSSMLSKRRSNMIRYTLLYIMSCRRRRSTIPSVAALGXXXXXXXXXXXXXSQPWRYCC 508
K+G + RRSN++R L MS R+T P V A G S P R C
Sbjct: 672 KTGRPTV*NRRSNIMRTRSLSSMSASLGRTTTPLVPAAGRPLRSSTTSRASSSHPTRXCA 493
Query: 507 TTLLVKKGTVMMRRILRQWSPYTVNTMSCPLSVKMSKTTLRVREPNSTPCVWSTSRASGG 328
TTLLVKKGTVM+RRILRQWSPYTVNTMSCPL VKMSKTTLRVREPNSTP VW TS AS G
Sbjct: 492 TTLLVKKGTVMIRRILRQWSPYTVNTMSCPLPVKMSKTTLRVREPNSTPWVWRTSLASSG 313
Query: 327 DETTTRLRCPIRRRKTSPNLRDSAARLRWLRSSPTCSQFPKXXXXXXXXGSRSLRPRILD 148
ETTTRLR P+RRR TSPN RLRWLRSSPTCSQ P G R P L
Sbjct: 312 LETTTRLRTPMRRRNTSPNRLARPIRLRWLRSSPTCSQLPTMGAPEGPGGRRKRLPASLA 133
Query: 147 TAMATMTDAKRPTRSFSTKRRTM 79
TAMA+ AKRP+R+FS +R ++
Sbjct: 132 TAMASTAAAKRPSRAFSRRRTSI 64
Score = 179 bits (385), Expect(2) = 9e-048
Identities = 88/155 (56%), Positives = 96/155 (61%)
Frame = -3 / -3
Query: 508 HDLVGEEGHGHDAAHLAPVVAVHGEHHVLPLVREDVEDHVAGAGAELHALRVEHLPRQRR 329
H LVGEEGH HD HLAPVVAVH EHHVL L EDVED VAGAGAEL AL VE L +
Sbjct: 493 HHLVGEEGHRHDPPHLAPVVAVHREHHVLSLAGEDVEDDVAGAGAELDALGVEDLLGELG 314
Query: 328 RRDHHQVALPHPEEEDVAELAGQRGEVAVVEVVADLQPVPEDGHGDGAGRQPELAATDLX 149
D HQVA H EEE +AE GQ +VAVVEVVADLQPV +DG GAG + E A +L
Sbjct: 313 AGDDHQVADAHAEEEHLAEPLGQAHQVAVVEVVADLQPVADDGGAGGAGWEAEALAGELG 134
Query: 148 XXXXXXXXRQEADQELLHEEKDHGDGAEMEGGLAC 44
+EA Q LL EE H + G AC
Sbjct: 133 YGDGQHRRGEEAQQGLLQEEDVHRGVGAVCGSCAC 29
Score = 92.3 bits (195), Expect = 8e-018
Identities = 37/44 (84%), Positives = 37/44 (84%)
Frame = +1 / +1
Query: 370 VRLPHPQRGLRHLHGQGAGHGVHRVRRPLAQDAPHHDRALLHQQ 501
VRLPHPQR LRHLH QG GHGVH VRRPLAQDA HD ALLHQQ
Sbjct: 355 VRLPHPQRRLRHLHRQGTGHGVHGVRRPLAQDAADHDGALLHQQ 486
Score = 33.6 bits (67), Expect = 3.5
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +1 / -2
Query: 61 PSPPRRHGPSLRGEAPGRPLGVRHG 135
P+PPRR GP+ GRP G R G
Sbjct: 122 PAPPRRRGPAGPSPGGGRPSGGRRG 48
Score = 33.1 bits (66), Expect = 4.8
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = +3 / +3
Query: 423 RTWCSPCTATTG 458
RTWCS CTATTG
Sbjct: 408 RTWCSRCTATTG 443
Score = 32.7 bits (65), Expect(2) = 9e-048
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -3 / -3
Query: 673 HALEAPVEHDPVYVVVHHELQASAEHDSVGGR 578
H LE EH+ VVV HE Q + H + G R
Sbjct: 658 HGLEPAFEHNADQVVVIHECQPGSHHHAFGPR 563
>gb|CA026832.1|CA026832 HZ57B14r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ57B14
5-PRIME, mRNA sequence
Length = 400
Score = 281 bits (608), Expect = 8e-075
Identities = 115/130 (88%), Positives = 124/130 (95%)
Frame = +2 / +2
Query: 794 LRVCKEVKETRLKLFKDFFLEERKKLASTKATDSNGLKCAIDHILEAQQKGEINEDNVLF 973
LR+CKEVKETRLKLFKD+FL+ERKKLASTKA D+NGLKCAIDHILEA+QKGEINEDNVL+
Sbjct: 11 LRICKEVKETRLKLFKDYFLDERKKLASTKAMDNNGLKCAIDHILEAEQKGEINEDNVLY 190
Query: 974 IVENINVAAIETTLWSIEWAVAELVNHPEIQQKLRQELDTVLGPGHQITEPDTHNLPYLQ 1153
I+ENINVAAIETTLWSIEW +AELVNHPEIQQKLR E+D VLG GHQITEPDTH LPYLQ
Sbjct: 191 IIENINVAAIETTLWSIEWGLAELVNHPEIQQKLRDEMDAVLGVGHQITEPDTHRLPYLQ 370
Query: 1154 AVIKETLRLR 1183
AVIKETLRLR
Sbjct: 371 AVIKETLRLR 400
Score = 206 bits (444), Expect = 3e-052
Identities = 92/107 (85%), Positives = 94/107 (87%)
Frame = -1 / -2
Query: 1182 RSRSVSLITACR*GRLCVSGSVIWWPGPSTVSSSCRSFCWISGWFTSSATAHSIDHSVVS 1003
RSRSVSLITACR*G LCVSGSVIW P PST S S RSFCWISGWFTSSA+ HSIDHSVVS
Sbjct: 399 RSRSVSLITACR*GSLCVSGSVIWCPTPSTASISSRSFCWISGWFTSSASPHSIDHSVVS 220
Query: 1002 IAATLMFSTMKSTLSSLISPFCCASSM*SMAHLRPLLSVALVLASFF 862
IAATLMFS M TLSSLISPFC AS M*SMAHL PLLS+ALVLASFF
Sbjct: 219 IAATLMFSMM*RTLSSLISPFCSASRM*SMAHLSPLLSMALVLASFF 79
Score = 74.4 bits (156), Expect = 2e-012
Identities = 36/61 (59%), Positives = 36/61 (59%)
Frame = +1 / +1
Query: 847 LPRXXXXXXXXXXXXXXRPQVRH*SHTGGTAEG*DQRGQRALHRREH*RCSDRDHAVVDR 1026
LPR R QVRH*SH G AEG DQRGQR LH REH R DRD AVVDR
Sbjct: 64 LPRREEEAGEHQGHGQQRTQVRH*SHPRGRAEGGDQRGQRPLHHREHQRRRDRDDAVVDR 243
Query: 1027 V 1029
V
Sbjct: 244 V 246
Score = 68.9 bits (144), Expect(2) = 7e-016
Identities = 33/61 (54%), Positives = 36/61 (59%)
Frame = -3 / -1
Query: 1180 QPQRLLDHRLQVGEXXXXXXXXXXXRPEHRVXXXXXXXXXLRVVHQLSDRPLDRPQRGLD 1001
QPQRLLDHRLQVG+ +HRV LRVVHQL + PLDRPQR LD
Sbjct: 397 QPQRLLDHRLQVGQPVRVRLRDLVPDAQHRVHLVPQLLLDLRVVHQLREPPLDRPQRRLD 218
Query: 1000 R 998
R
Sbjct: 217 R 215
Score = 35.9 bits (72), Expect(2) = 7e-016
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = -3 / -1
Query: 922 VINGALEAVAVRGLGARQ 869
VINGALE+V V GLGARQ
Sbjct: 139 VINGALESVVVHGLGARQ 86
>gb|BG308974.1|BG308974 HVSMEc0001C17f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0001C17f, mRNA sequence
Length = 780
Score = 256 bits (554), Expect(2) = 6e-074
Identities = 108/167 (64%), Positives = 126/167 (75%)
Frame = +2 / +2
Query: 122 ASVMVAIAVSKIRGRKLRLXXXXXXXXXFGNWLQVGDDLNHRNLAALSRKFGDVFLLRMG 301
A+ ++AIAV+K+ G++ RL GNWLQ GDDLNHRNL ++++FG+VFLLRMG
Sbjct: 62 AAALLAIAVAKLTGKRFRLPPGPSGAPIVGNWLQGGDDLNHRNLMGMAKRFGEVFLLRMG 241
Query: 302 QRNLVVVSSPPLAREVLHTQGVEFGSRTRNVVFDIFTDKGQDMVFTVYGDHWRKMRRIMT 481
RNLVVVSSP LA+EVLHTQGVEFGSRTRNVVFDIFT KGQDMVFTVYGDHWRKMRRIMT
Sbjct: 242 ARNLVVVSSPELAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGDHWRKMRRIMT 421
Query: 482 VPFFTNKVVQQYRHGWXXXXXXXXXXXRLDPKAATDGIVLRRRLQLM 622
VPFFTNKVV Q R GW + DP +AT ++ RR +M
Sbjct: 422 VPFFTNKVVAQNRVGWEEEARLVVEDLKADPASATGVVIRRRLQLMM 562
Score = 205 bits (442), Expect(2) = 4e-063
Identities = 100/165 (60%), Positives = 106/165 (64%)
Frame = -1 / -1
Query: 585 VAALGXXXXXXXXXXXXXSQPWRYCCTTLLVKKGTVMMRRILRQWSPYTVNTMSCPLSVK 406
VA G S P R+C TTLLVKKGTVM+RRILRQWSP TVNTMS PL VK
Sbjct: 525 VADAGSALRSSTTSLASSSHPTRFCATTLLVKKGTVMIRRILRQWSP*TVNTMSWPLPVK 346
Query: 405 MSKTTLRVREPNSTPCVWSTSRASGGDETTTRLRCPIRRRKTSPNLRDSAARLRWLRSSP 226
MSKTTLRVREPNSTP VW TS AS G ETTTRLR P+RRR TSP RLR LRSSP
Sbjct: 345 MSKTTLRVREPNSTPWVWRTSLASSGLETTTRLRAPMRRRNTSPKRLAMPMRLR*LRSSP 166
Query: 225 TCSQFPKXXXXXXXXGSRSLRPRILDTAMATMTDAKRPTRSFSTK 91
SQ P GSR P L TAMA+ AKRP R+FS +
Sbjct: 165 PWSQLPTIGAPEGPGGSRKRLPVSLATAMASSAAAKRPRRAFSRR 31
Score = 145 bits (312), Expect(2) = 4e-041
Identities = 72/139 (51%), Positives = 83/139 (59%)
Frame = -3 / -3
Query: 508 HDLVGEEGHGHDAAHLAPVVAVHGEHHVLPLVREDVEDHVAGAGAELHALRVEHLPRQRR 329
H LVGEEGH HD HLAPVVAV EHHVL EDVED V GA AEL AL VE L +
Sbjct: 448 HHLVGEEGHRHDTPHLAPVVAVDSEHHVLAFAGEDVEDDVTGARAELDALGVEDLLGELG 269
Query: 328 RRDHHQVALPHPEEEDVAELAGQRGEVAVVEVVADLQPVPEDGHGDGAGRQPELAATDLX 149
D +QVA H +EE +AE G EVAV+EV+A L+PV +D G QPE A +L
Sbjct: 268 AGDDNQVAGAHAQEEHLAETLGHAHEVAVIEVIAPLEPVADDRGAGGPRGQPEALAGELG 89
Query: 148 XXXXXXXXRQEADQELLHE 92
R+EA + LL E
Sbjct: 88 DRDGEQRRREEAQEGLLQE 32
Score = 139 bits (299), Expect(2) = 4e-050
Identities = 55/80 (68%), Positives = 68/80 (85%)
Frame = +2 / +2
Query: 578 AATDGIVLRRRLQLMMYNNVYRIMFDRRFESMDDPLFLRLRALNGERSRLAQSFEYNYGD 757
A+ G+V+RRRLQLMMYN+++RIMFDRRFES+ DPLF +LRALN ERS L+ S +YNYGD
Sbjct: 515 ASATGVVIRRRLQLMMYNDMFRIMFDRRFESLADPLFNKLRALNAERSILSHSLDYNYGD 694
Query: 758 FIPILRPFLRGYLRVCKEVK 817
F+P+LRPFLRGYL C +K
Sbjct: 695 FMPMLRPFLRGYLNRCTNLK 754
Score = 79.9 bits (168), Expect(2) = 4e-050
Identities = 33/44 (75%), Positives = 35/44 (79%)
Frame = +1 / +1
Query: 370 VRLPHPQRGLRHLHGQGAGHGVHRVRRPLAQDAPHHDRALLHQQ 501
VRL HP R LRHLH Q GHGVH +RRPLAQDA +HD ALLHQQ
Sbjct: 310 VRLSHP*RRLRHLHRQRPGHGVHCLRRPLAQDAAYHDGALLHQQ 441
Score = 57.9 bits (120), Expect(2) = 4e-063
Identities = 30/57 (52%), Positives = 32/57 (56%)
Frame = -1 / -1
Query: 759 KSP*LYSKLCXXXXXXXXXXXXXRKSGSSMLSKRRSNMIRYTLLYIMSCRRRRSTIP 589
KSP*L SKL KSGS+ LS RRSNM+R LYIMSC RR T P
Sbjct: 696 KSP*L*SKLWERMLRSALRALSLLKSGSARLSNRRSNMMRNMSLYIMSCSLRRITTP 526
Score = 43.7 bits (89), Expect(2) = 4e-041
Identities = 17/25 (68%), Positives = 20/25 (80%)
Frame = -3 / -3
Query: 670 ALEAPVEHDPVYVVVHHELQASAEH 596
ALE VEHD +VVVHHELQ +A+H
Sbjct: 607 ALEPAVEHDAEHVVVHHELQPAADH 533
Score = 42.8 bits (87), Expect(2) = 6e-074
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = +1 / +1
Query: 601 PPTPAAHDVQQRIPDHVRPALRE 669
PP AAHDVQ+ +P HVRP +RE
Sbjct: 538 PPQAAAHDVQRHVPHHVRPPVRE 606
>gb|BI955765.1|BI955765 HVSMEm0024G17f Hordeum vulgare green seedling EST library HVcDNA0014
(Blumeria infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEm0024G17f, mRNA sequence
Length = 696
Score = 264 bits (571), Expect = 1e-069
Identities = 120/179 (67%), Positives = 128/179 (71%)
Frame = -1 / -3
Query: 1542 NWPPFSVVSTLSCPGGGSSSKFWTRRPMVMPRMGRARMIPGQLLRPTPKGRYLKSLPLAS 1363
N P VVS+LS PG G S+K WTRRPMVMPRMG A M+PGQL RPTPKGRY+KSLPLAS
Sbjct: 538 NPPALPVVSSLSWPGAGVSTKLWTRRPMVMPRMGSASMMPGQLRRPTPKGRYVKSLPLAS 359
Query: 1362 TCFXXXXXXXXXXXXXXXXXXXXLARYQALTRILLSAGMSXPPSLASWRFMCGTSSGMAI 1183
TCF LAR QALTRILLSAGM P SLASWRFM GTSSGMA+
Sbjct: 358 TCFSSSRKRSGRNSSGRFHCSGLLARNQALTRILLSAGML*PASLASWRFMWGTSSGMAM 179
Query: 1182 RSRSVSLITACR*GRLCVSGSVIWWPGPSTVSSSCRSFCWISGWFTSSATAHSIDHSVV 1006
R+ LITACR*G LCVSGSVI P PST S S RSFCWISGWFTSS + HSI +VV
Sbjct: 178 RTPPPPLITACR*GSLCVSGSVICCPTPSTASISSRSFCWISGWFTSSXSPHSIAPTVV 2
Score = 196 bits (422), Expect(2) = 2e-071
Identities = 79/101 (78%), Positives = 87/101 (86%)
Frame = +2 / +3
Query: 1007 TTLWSIEWAVAELVNHPEIQQKLRQELDTVLGPGHQITEPDTHNLPYLQAVIKETLRLRM 1186
TT+ +IEW + ELVNHPEIQQKLR E+D VLG G QITEPDTH LPYLQAVIK +RM
Sbjct: 3 TTVGAIEWGLXELVNHPEIQQKLRDEMDAVLGVGQQITEPDTHRLPYLQAVIKGGGGVRM 182
Query: 1187 AIPLLVPHMNLHDAKLGGYDIPAESKILVNAWYLANNPDSW 1309
AIPLLVPHMNLHDAKL GY+IPAESKILVNAW+LANNP+ W
Sbjct: 183 AIPLLVPHMNLHDAKLAGYNIPAESKILVNAWFLANNPEQW 305
Score = 103 bits (219), Expect = 4e-021
Identities = 48/84 (57%), Positives = 51/84 (60%)
Frame = -3 / -2
Query: 1261 ALGGDVVXAELGVVEVHVRHQQRDGHPQPQRLLDHRLQVGEXXXXXXXXXXXRPEHRVXX 1082
ALGGDVV ELGVVEVHV HQQRDGH P LDHRLQVG+ +HRV
Sbjct: 257 ALGGDVVAGELGVVEVHVGHQQRDGHAHPPPPLDHRLQVGQPVRVRLRDLLPDAQHRVHL 78
Query: 1081 XXXXXXXLRVVHQLSDRPLDRPQR 1010
LRVVHQL + PLDRP R
Sbjct: 77 VPQLLLDLRVVHQLREPPLDRPHR 6
Score = 94.5 bits (200), Expect(2) = 2e-071
Identities = 42/86 (48%), Positives = 49/86 (56%)
Frame = +2 / +3
Query: 1355 KHVEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQDKVDTTEKG 1534
KHVEANGNDF YLPFGVGRRSCP RLV NF L P PGQDK+DTT +
Sbjct: 351 KHVEANGNDFTYLPFGVGRRSCPGIMLALPILGITIGRLVHNFVLTPAPGQDKLDTTGRA 530
Query: 1535 GQFSLHILKHSTIVCKPRTL*EQPTR 1612
G S + + + R +* + R
Sbjct: 531 GGLSSRLWNRAPSWARRRVV*SRRGR 608
>gb|BM817083.1|BM817083 HC01F04_T3.ab1 HC Hordeum vulgare subsp. vulgare cDNA clone
HC01F04_T3.ab1 similar to Steroid
17-alpha-monooxygenase,Unspecific monooxygenase, mRNA
sequence
Length = 786
Score = 227 bits (491), Expect(2) = 8e-070
Identities = 95/132 (71%), Positives = 104/132 (78%)
Frame = +2 / +3
Query: 983 NINVAAIETTLWSIEWAVAELVNHPEIQQKLRQELDTVLGPGHQITEPDTHNLPYLQAVI 1162
NINVAAIETTLWSIEW +AELVNHPEIQQKLR+E+ VLGPG +TEPD LPYLQ+V+
Sbjct: 3 NINVAAIETTLWSIEWGLAELVNHPEIQQKLREEIVAVLGPGTPVTEPDLERLPYLQSVV 182
Query: 1163 KETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWYLANNPDSWXXXXXXXXXXX 1342
KETLRLRMAIPLLVPHMNL DAKL GYDIPAESKILVNAW+LAN+P W
Sbjct: 183 KETLRLRMAIPLLVPHMNLSDAKLAGYDIPAESKILVNAWFLANDPKRWVRADEFRPERF 362
Query: 1343 XXXXKHVEANGN 1378
K VEA+GN
Sbjct: 363 LEEEKSVEAHGN 398
Score = 178 bits (384), Expect(2) = 7e-052
Identities = 87/139 (62%), Positives = 91/139 (65%)
Frame = -1 / -3
Query: 1398 KGRYLKSLPLASTCFXXXXXXXXXXXXXXXXXXXXLARYQALTRILLSAGMSXPPSLASW 1219
+ R LP AST F LAR QALTRIL SAGMS P SLAS
Sbjct: 418 RARTGSXLPWASTDFSSSRKRSGLNSSARTHRLGSLARNQALTRILDSAGMS*PASLASL 239
Query: 1218 RFMCGTSSGMAIRSRSVSLITACR*GRLCVSGSVIWWPGPSTVSSSCRSFCWISGWFTSS 1039
RFMCGT SGMA+R RSVS T CR*GR SGSV PGPST + S RSFCWISGWFTSS
Sbjct: 238 RFMCGTRSGMAMRRRSVSFTTDCR*GRRSRSGSVTGVPGPSTATISSRSFCWISGWFTSS 59
Query: 1038 ATAHSIDHSVVSIAATLMF 982
A HSIDHSVVS+AATLMF
Sbjct: 58 ARPHSIDHSVVSMAATLMF 2
Score = 99.1 bits (210), Expect(2) = 3e-023
Identities = 45/88 (51%), Positives = 53/88 (60%)
Frame = -3 / -2
Query: 1255 GGDVVXAELGVVEVHVRHQQRDGHPQPQRLLDHRLQVGEXXXXXXXXXXXRPEHRVXXXX 1076
GGDVV ELG+ EVHVRHQ+RDGH + +RLL LQVGE R +H
Sbjct: 275 GGDVVTGELGIAEVHVRHQERDGHAEAERLLHDGLQVGEALQVRLRHRRARAQHGDDLLA 96
Query: 1075 XXXXXLRVVHQLSDRPLDRPQRGLDRCN 992
LRVVHQL + PLDRPQR L+ C+
Sbjct: 95 QLLLDLRVVHQLREAPLDRPQRRLNGCD 12
Score = 57.9 bits (120), Expect(2) = 8e-070
Identities = 22/33 (66%), Positives = 27/33 (81%)
Frame = +2 / +2
Query: 1487 LLPPPGQDKVDTTEKGGQFSLHILKHSTIVCKP 1585
LLPP GQDK+DTTEK +FS IL+H+T+ CKP
Sbjct: 518 LLPPAGQDKIDTTEKPREFSNQILQHATLRCKP 616
Score = 46.9 bits (96), Expect(2) = 7e-052
Identities = 20/33 (60%), Positives = 22/33 (66%)
Frame = -1 / -1
Query: 1584 GLHTMVECFKMWRLNWPPFSVVSTLSCPGGGSS 1486
GL V C ++W LN FSVVS LSCP GGSS
Sbjct: 615 GLQRRVAC*RIWLLNSRGFSVVSILSCPAGGSS 517
Score = 34.1 bits (68), Expect(2) = 3e-023
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -2 / -2
Query: 1595 KAFLACTRWWNASRCGD*TGLPSRWCXPCP 1506
K +AC W A G *T + RWC CP
Sbjct: 626 KLGVACNEGWRAEGSGC*TPVVFRWCRSCP 537
Score = 32.2 bits (64), Expect = 9.0
Identities = 16/34 (47%), Positives = 19/34 (55%)
Frame = -3 / -3
Query: 1585 WLAHDGGMLQDVETELASXXXXXXXXLPGRRQQL 1484
WLA GG+L+D+ EL LP RRQQL
Sbjct: 616 WLATKGGVLKDLVAELPWFFGGVDLVLPRRRQQL 515
>gb|BQ758724.1|BQ758724 EBma07_SQ002_J15_R maternal, 21 DPA, no treatment, cv Optic, EBma07
Hordeum vulgare subsp. vulgare cDNA clone
EBma07_SQ002_J15 5', mRNA sequence
Length = 490
Score = 264 bits (572), Expect = 8e-070
Identities = 116/152 (76%), Positives = 121/152 (79%)
Frame = -1 / -3
Query: 1596 *SVLGLHTMVECFKMWRLNWPPFSVVSTLSCPGGGSSSKFWTRRPMVMPRMGRARMIPGQ 1417
*+ LGL TMVECFKMWRLNWPPFSVVS+LS PGGG S+KFWTRRPMVMPRMG ARM+PGQ
Sbjct: 458 *NTLGLATMVECFKMWRLNWPPFSVVSSLSWPGGGESTKFWTRRPMVMPRMGSARMMPGQ 279
Query: 1416 LLRPTPKGRYLKSLPLASTCFXXXXXXXXXXXXXXXXXXXXLARYQALTRILLSAGMSXP 1237
L RPTPKGRYLKSLPLASTCF LAR QALTRILLSAGM P
Sbjct: 278 LRRPTPKGRYLKSLPLASTCFSSSRKRSGRNSSGRFHCSGLLARNQALTRILLSAGML*P 99
Query: 1236 PSLASWRFMCGTSSGMAIRSRSVSLITACR*G 1141
SLASWRFM GTSSGMA+RSRSVSLITACR*G
Sbjct: 98 ASLASWRFMWGTSSGMAMRSRSVSLITACR*G 3
Score = 147 bits (316), Expect(2) = 9e-068
Identities = 62/86 (72%), Positives = 63/86 (73%)
Frame = +2 / +1
Query: 1355 KHVEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQDKVDTTEKG 1534
KHVEANGNDFRYLPFGVGRRSCP RLVQNF L PPPGQDK+DTTEKG
Sbjct: 217 KHVEANGNDFRYLPFGVGRRSCPGIILALPILGITIGRLVQNFVLSPPPGQDKLDTTEKG 396
Query: 1535 GQFSLHILKHSTIVCKPRTL*EQPTR 1612
GQFSLHILKHSTIV KPR * R
Sbjct: 397 GQFSLHILKHSTIVAKPRVF*SSGVR 474
Score = 131 bits (280), Expect(2) = 9e-068
Identities = 52/57 (91%), Positives = 55/57 (96%)
Frame = +2 / +1
Query: 1139 LPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWYLANNPDSW 1309
LPYLQAVIKETLRLRMAIPLLVPHMNLHDAKL GY+IPAESKILVNAW+LANNP+ W
Sbjct: 1 LPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLAGYNIPAESKILVNAWFLANNPEQW 171
Score = 89.0 bits (188), Expect(2) = 5e-026
Identities = 36/41 (87%), Positives = 37/41 (90%)
Frame = -3 / -2
Query: 1261 ALGGDVVXAELGVVEVHVRHQQRDGHPQPQRLLDHRLQVGE 1139
ALGGDVV ELGVVEVHV HQQRDGH QPQRLLDHRLQVG+
Sbjct: 123 ALGGDVVAGELGVVEVHVGHQQRDGHAQPQRLLDHRLQVGQ 1
Score = 59.3 bits (123), Expect(2) = 6e-010
Identities = 24/45 (53%), Positives = 26/45 (57%)
Frame = +1 / +3
Query: 1477 ELXXXXXXXXGQGXHHREGRPVQSPHLEAFHHRVQAKNALRAAHT 1611
EL GQ HH EGRPVQ PHLEA HHR QA++ L T
Sbjct: 339 ELRALAAARPGQARHHGEGRPVQPPHLEALHHRGQAQSVLEQRRT 473
Score = 52.8 bits (109), Expect(2) = 5e-026
Identities = 18/26 (69%), Positives = 19/26 (73%)
Frame = -2 / -1
Query: 1583 ACTRWWNASRCGD*TGLPSRWCXPCP 1506
A RWW+ASRCG *TG PS WC CP
Sbjct: 445 AWPRWWSASRCGG*TGRPSPWCRACP 368
Score = 48.7 bits (100), Expect = 1e-004
Identities = 24/48 (50%), Positives = 29/48 (60%)
Frame = -3 / -2
Query: 1618 EPTCGLLLKRSWLAHDGGMLQDVETELASXXXXXXXXLPGRRQQLEVL 1475
E T L+ S L HDGG+LQDVE ELA+ L GRR++ EVL
Sbjct: 480 ESTYAAALEHSGLGHDGGVLQDVEAELAALLRGVELVLAGRRREHEVL 337
Score = 25.4 bits (49), Expect(2) = 6e-010
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +1 / +3
Query: 1387 VPALRRRPQEL 1419
VPALRRRP EL
Sbjct: 249 VPALRRRPPEL 281
>gb|BF253423.2|BF253423 HVSMEf0001G03f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0001G03f, mRNA sequence
Length = 843
Score = 264 bits (570), Expect = 1e-069
Identities = 115/155 (74%), Positives = 124/155 (80%)
Frame = +2 / +3
Query: 122 ASVMVAIAVSKIRGRKLRLXXXXXXXXXFGNWLQVGDDLNHRNLAALSRKFGDVFLLRMG 301
A+V+ AI VSKIRGRKLRL FGNWLQVGDDLNHRNLAA++RKFG+VFLLRMG
Sbjct: 171 AAVVGAIVVSKIRGRKLRLPPGPIPVPIFGNWLQVGDDLNHRNLAAMARKFGEVFLLRMG 350
Query: 302 QRNLVVVSSPPLAREVLHTQGVEFGSRTRNVVFDIFTDKGQDMVFTVYGDHWRKMRRIMT 481
QRNLVVVSSPPLAREVLHTQGVEFGSRTRNVVFDIFT +GQDMVFTVYGDHWRKMR I+T
Sbjct: 351 QRNLVVVSSPPLAREVLHTQGVEFGSRTRNVVFDIFTGEGQDMVFTVYGDHWRKMRSIVT 530
Query: 482 VPFFTNKVVQQYRHGWXXXXXXXXXXXRLDPKAAT 586
VPF TNKVVQ +R W R +AAT
Sbjct: 531 VPFLTNKVVQLFRSDW*DQADYRVDRKRTYSRAAT 635
Score = 258 bits (558), Expect = 7e-068
Identities = 120/178 (67%), Positives = 128/178 (71%)
Frame = -1 / -3
Query: 609 RRRSTIPSVAALGXXXXXXXXXXXXXSQPWRYCCTTLLVKKGTVMMRRILRQWSPYTVNT 430
R S++ VAAL Q R CTTLLVKKGTV M RILRQWSPYTVNT
Sbjct: 658 RSSSSLSLVAALEYVRFLSTL*SAWSYQSDRNNCTTLLVKKGTVTMLRILRQWSPYTVNT 479
Query: 429 MSCPLSVKMSKTTLRVREPNSTPCVWSTSRASGGDETTTRLRCPIRRRKTSPNLRDSAAR 250
MS P VKMS TTLRVR+PNSTPCV STSRASGGD+TTTRLR P+RRR TSPNLR AAR
Sbjct: 478 MSWPSPVKMSNTTLRVRDPNSTPCVCSTSRASGGDDTTTRLRWPMRRRNTSPNLRAIAAR 299
Query: 249 LRWLRSSPTCSQFPKXXXXXXXXGSRSLRPRILDTAMATMTDAKRPTRSFSTKRRTMA 76
LRW RSSPTCSQ PK GS SLRPRILDT MA T A+RPTRSFSTK ++MA
Sbjct: 298 LRWFRSSPTCSQLPKMGTGMGPGGSLSLRPRILDTTMAPTTAARRPTRSFSTKTKSMA 125
Score = 243 bits (524), Expect = 3e-063
Identities = 105/151 (69%), Positives = 115/151 (76%)
Frame = -3 / -2
Query: 508 HDLVGEEGHGHDAAHLAPVVAVHGEHHVLPLVREDVEDHVAGAGAELHALRVEHLPRQRR 329
H LVG++GHGH A HLAPVV VHGEHHVL L EDVE HVAGAG ELHALRV+HLPRQRR
Sbjct: 557 HHLVGQKGHGHYAPHLAPVVTVHGEHHVLALAGEDVEHHVAGAGPELHALRVQHLPRQRR 378
Query: 328 RRDHHQVALPHPEEEDVAELAGQRGEVAVVEVVADLQPVPEDGHGDGAGRQPELAATDLX 149
R HHQVAL H EEE +AELAG R +VAVV+VVADLQPV EDGH DGA RQP+LAA DL
Sbjct: 377 GRHHHQVALAHAEEEHLAELAGHRRQVAVVQVVADLQPVAEDGHRDGARRQPQLAAPDLG 198
Query: 148 XXXXXXXXRQEADQELLHEEKDHGDGAEMEG 56
R+EA QELLHE++ HG G G
Sbjct: 197 HHDGAHHGREEAHQELLHEDEVHGAGRRGNG 105
Score = 87.2 bits (184), Expect(3) = 1e-025
Identities = 34/44 (77%), Positives = 37/44 (84%)
Frame = +1 / +2
Query: 370 VRLPHPQRGLRHLHGQGAGHGVHRVRRPLAQDAPHHDRALLHQQ 501
VR+PHPQRG+RHLH +G GHGVHRVR PLAQDA H DRAL QQ
Sbjct: 419 VRVPHPQRGVRHLHRRGPGHGVHRVR*PLAQDAEHSDRALFDQQ 550
Score = 49.6 bits (102), Expect(3) = 1e-025
Identities = 21/28 (75%), Positives = 21/28 (75%)
Frame = +1 / +2
Query: 73 RRHGPSLRGEAPGRPLGVRHGRHRGVQD 156
RRHG LRGEAPG P R GRHRGVQD
Sbjct: 122 RRHGLRLRGEAPGGPPRGRGGRHRGVQD 205
Score = 35.4 bits (71), Expect = 0.97
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = +3 / +1
Query: 423 RTWCSPCTATTG 458
RTWCSPCT TTG
Sbjct: 472 RTWCSPCTVTTG 507
Score = 33.1 bits (66), Expect = 4.8
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = -2 / -1
Query: 500 CW*RRARS*CGASCAS 453
CW +RARS C ASCAS
Sbjct: 549 CWSKRARSLCSASCAS 502
Score = 24.9 bits (48), Expect(3) = 1e-025
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +3 / +1
Query: 162 AASSGCLPAPSPCP 203
AAS GC APS CP
Sbjct: 211 AAS*GCRRAPSRCP 252
>gb|BI779253.2|BI779253 EBro01_SQ003_H11_R root, 3 week, hydroponic grown, no treatment, cv
Optic, EBro01 Hordeum vulgare subsp. vulgare cDNA clone
EBro01_SQ003_H11 5', mRNA sequence
Length = 489
Score = 259 bits (561), Expect = 3e-068
Identities = 105/136 (77%), Positives = 117/136 (86%)
Frame = +2 / +2
Query: 902 LKCAIDHILEAQQKGEINEDNVLFIVENINVAAIETTLWSIEWAVAELVNHPEIQQKLRQ 1081
++CA+DHILEA++KGEIN DNVL+I ENIN AIETTLWSIEW VAELVNHP+IQ KLRQ
Sbjct: 62 IRCAMDHILEAERKGEINHDNVLYIGENINGGAIETTLWSIEWGVAELVNHPDIQSKLRQ 241
Query: 1082 ELDTVLGPGHQITEPDTHNLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAES 1261
E+ VLGP +TEPD LPYLQAV+KETLRLRM IPLLVPHMNL DAKL GYDIPAES
Sbjct: 242 EIAAVLGPDAAVTEPDLERLPYLQAVVKETLRLRMGIPLLVPHMNLKDAKLTGYDIPAES 421
Query: 1262 KILVNAWYLANNPDSW 1309
KILVNAW+LAN+P W
Sbjct: 422 KILVNAWFLANDPKRW 469
Score = 182 bits (393), Expect = 4e-045
Identities = 92/129 (71%), Positives = 95/129 (73%)
Frame = -1 / -1
Query: 1290 ARYQALTRILLSAGMSXPPSLASWRFMCGTSSGMAIRSRSVSLITACR*GRLCVSGSVIW 1111
AR QALTRIL SAGMS P SLAS RFM GT SGM +R R VSL TACR*GR SGSV
Sbjct: 450 ARNQALTRILDSAGMS*PVSLASLRFMWGTRSGMPMRRRRVSLTTACR*GRRSRSGSVTA 271
Query: 1110 WPGPSTVSSSCRSFCWISGWFTSSATAHSIDHSVVSIAATLMFSTMKSTLSSLISPFCCA 931
GPST + S RSF W+SGWFTSSAT HSIDH VVSIA LMFS M TLS LISPF A
Sbjct: 270 ASGPSTAAIS*RSFDWMSGWFTSSATPHSIDHRVVSIAPPLMFSPMYRTLSWLISPFRSA 91
Query: 930 SSM*SMAHL 904
S M SMAHL
Sbjct: 90 SRMWSMAHL 64
Score = 52.8 bits (109), Expect(2) = 4e-010
Identities = 21/40 (52%), Positives = 28/40 (70%)
Frame = -3 / -3
Query: 1258 LGGDVVXAELGVVEVHVRHQQRDGHPQPQRLLDHRLQVGE 1139
L GDVV +ELG++EVHV H++ D H + + LD LQV E
Sbjct: 418 LSGDVVASELGILEVHVGHEEWDAHAEAEGFLDDGLQVRE 299
Score = 46.9 bits (96), Expect = 3e-004
Identities = 23/42 (54%), Positives = 26/42 (61%)
Frame = +1 / +1
Query: 904 QVRH*SHTGGTAEG*DQRGQRALHRREH*RCSDRDHAVVDRV 1029
Q+RH H G EG*DQ QR +H EH R S+ D VVDRV
Sbjct: 64 QMRHGPHPRGRTEG*DQPRQRPIHWGEHQRRSN*DDPVVDRV 189
Score = 32.2 bits (64), Expect(2) = 4e-010
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = -3 / -3
Query: 1057 RVVHQLSDRPLDRPQRGLD 1001
RVVHQL + PLDRPQ L+
Sbjct: 217 RVVHQLCNSPLDRPQGRLN 161
>gb|BF257476.2|BF257476 HVSMEf0013A08f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0013A08f, mRNA sequence
Length = 493
Score = 155 bits (332), Expect(3) = 1e-066
Identities = 60/92 (65%), Positives = 80/92 (86%)
Frame = +2 / +2
Query: 593 IVLRRRLQLMMYNNVYRIMFDRRFESMDDPLFLRLRALNGERSRLAQSFEYNYGDFIPIL 772
+V+RRRLQLMMYN+++RIMFDRRFE++ DPLF +L+ALN ERS L+QSF+YNYGDFIP+L
Sbjct: 104 LVVRRRLQLMMYNDMFRIMFDRRFETVADPLFNQLKALNAERSILSQSFDYNYGDFIPVL 283
Query: 773 RPFLRGYLRVCKEVKETRLKLFKDFFLEERKK 868
RPFLR YL C +K R+K+F+D F+++RK+
Sbjct: 284 RPFLRRYLNRCTNLKTKRMKVFEDHFVQQRKE 379
Score = 78.0 bits (164), Expect(3) = 1e-066
Identities = 30/37 (81%), Positives = 34/37 (91%)
Frame = +2 / +2
Query: 209 GNWLQVGDDLNHRNLAALSRKFGDVFLLRMGQRNLVV 319
GNWLQVGDDLNHRNL L+++FG+VFLLRMG RNLVV
Sbjct: 2 GNWLQVGDDLNHRNLMGLAKRFGEVFLLRMGVRNLVV 112
Score = 66.1 bits (138), Expect(4) = 4e-029
Identities = 27/37 (72%), Positives = 28/37 (75%)
Frame = -1 / -2
Query: 318 TTRLRCPIRRRKTSPNLRDSAARLRWLRSSPTCSQFP 208
TTRLR P+RRR TSPN RLRWLRSSPTCSQ P
Sbjct: 111 TTRLRTPMRRRNTSPNRLARPIRLRWLRSSPTCSQLP 1
Score = 65.7 bits (137), Expect(3) = 1e-066
Identities = 25/31 (80%), Positives = 30/31 (96%)
Frame = +2 / +2
Query: 902 LKCAIDHILEAQQKGEINEDNVLFIVENINV 994
+KCA+DHILEA++KGEIN DNVL+IVENINV
Sbjct: 401 IKCAMDHILEAERKGEINHDNVLYIVENINV 493
Score = 57.9 bits (120), Expect(2) = 6e-014
Identities = 26/36 (72%), Positives = 28/36 (77%)
Frame = -3 / -1
Query: 319 HHQVALPHPEEEDVAELAGQRGEVAVVEVVADLQPV 212
HHQVA H EEE +AE GQ +VAVVEVVADLQPV
Sbjct: 112 HHQVADAHAEEEHLAEPLGQAHQVAVVEVVADLQPV 5
Score = 55.1 bits (114), Expect(4) = 4e-029
Identities = 28/55 (50%), Positives = 32/55 (58%)
Frame = -1 / -2
Query: 759 KSP*LYSKLCXXXXXXXXXXXXXRKSGSSMLSKRRSNMIRYTLLYIMSCRRRRST 595
KSP*L SKL KSGS+ +S RRSNM+R LYIMSC RR+T
Sbjct: 270 KSP*L*SKLWERMLRSALSALSWLKSGSATVSNRRSNMMRNMSLYIMSCSLRRTT 106
Score = 46.4 bits (95), Expect(4) = 4e-029
Identities = 23/30 (76%), Positives = 23/30 (76%)
Frame = -1 / -2
Query: 993 TLMFSTMKSTLSSLISPFCCASSM*SMAHL 904
TLMFSTM TLS LISPF AS M SMAHL
Sbjct: 492 TLMFSTM*RTLSWLISPFLSASRMWSMAHL 403
Score = 43.2 bits (88), Expect(2) = 6e-014
Identities = 16/26 (61%), Positives = 19/26 (73%)
Frame = -3 / -1
Query: 673 HALEAPVEHDPVYVVVHHELQASAEH 596
H LE VEHD +VVVHHELQ ++ H
Sbjct: 184 HGLEPAVEHDAEHVVVHHELQPASHH 107
Score = 42.8 bits (87), Expect(2) = 2e-007
Identities = 19/30 (63%), Positives = 19/30 (63%)
Frame = +1 / +1
Query: 904 QVRH*SHTGGTAEG*DQRGQRALHRREH*R 993
QVRH H G EG DQ QR LHRREH R
Sbjct: 403 QVRHGPHPGSRKEGRDQPRQRPLHRREHQR 492
Score = 35.9 bits (72), Expect(2) = 2e-007
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = +1 / +1
Query: 613 AAHDVQQRIPDHVRPALRE 669
AAHDVQ+ +P HVRP +R+
Sbjct: 124 AAHDVQRHVPHHVRPPVRD 180
Score = 22.6 bits (43), Expect(4) = 4e-029
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -3 / -1
Query: 793 VAAEERTEDGD 761
VAAEE EDGD
Sbjct: 304 VAAEEGAEDGD 272
>gb|BI778834.2|BI778834 EBro01_SQ001_L02_R root, 3 week, hydroponic grown, no treatment, cv
Optic, EBro01 Hordeum vulgare subsp. vulgare cDNA clone
EBro01_SQ001_L02 5', mRNA sequence
Length = 537
Score = 248 bits (537), Expect = 5e-065
Identities = 103/136 (75%), Positives = 115/136 (84%)
Frame = +2 / +2
Query: 122 ASVMVAIAVSKIRGRKLRLXXXXXXXXXFGNWLQVGDDLNHRNLAALSRKFGDVFLLRMG 301
A+ ++AIAV+K+ G++ RL GNWLQVGDDLNHRNL L+++FG+VFLLRMG
Sbjct: 104 AAAVLAIAVAKLAGKRFRLPPGPSGAPIVGNWLQVGDDLNHRNLMGLAKRFGEVFLLRMG 283
Query: 302 QRNLVVVSSPPLAREVLHTQGVEFGSRTRNVVFDIFTDKGQDMVFTVYGDHWRKMRRIMT 481
RNLVVVSSP LA+EVLHTQGVEFGSRTRNVVFDIFT KGQDMVFTVYGDHWRKMRRIMT
Sbjct: 284 VRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGDHWRKMRRIMT 463
Query: 482 VPFFTNKVVQQYRHGW 529
VPFFTNKVV Q R GW
Sbjct: 464 VPFFTNKVVAQNRVGW 511
Score = 231 bits (498), Expect = 1e-059
Identities = 102/149 (68%), Positives = 111/149 (74%)
Frame = -1 / -1
Query: 525 PWRYCCTTLLVKKGTVMMRRILRQWSPYTVNTMSCPLSVKMSKTTLRVREPNSTPCVWST 346
P R+C TTLLVKKGTVM+RRILRQWSPYTVNTMSCPL VKMSKTTLRVREPNSTP VW T
Sbjct: 507 PTRFCATTLLVKKGTVMIRRILRQWSPYTVNTMSCPLPVKMSKTTLRVREPNSTPWVWRT 328
Query: 345 SRASGGDETTTRLRCPIRRRKTSPNLRDSAARLRWLRSSPTCSQFPKXXXXXXXXGSRSL 166
S AS G ETTTRLR P+RRR TSPN RLRWLRSSPTCSQ P G R
Sbjct: 327 SLASSGLETTTRLRTPMRRRNTSPNRLARPIRLRWLRSSPTCSQLPTMGAPEGPGGRRKR 148
Query: 165 RPRILDTAMATMTDAKRPTRSFSTKRRTM 79
P L TAMA+ AKRP+R+FS +R ++
Sbjct: 147 LPASLATAMASTAAAKRPSRAFSRRRTSI 61
Score = 179 bits (385), Expect = 5e-044
Identities = 88/155 (56%), Positives = 96/155 (61%)
Frame = -3 / -3
Query: 508 HDLVGEEGHGHDAAHLAPVVAVHGEHHVLPLVREDVEDHVAGAGAELHALRVEHLPRQRR 329
H LVGEEGH HD HLAPVVAVH EHHVL L EDVED VAGAGAEL AL VE L +
Sbjct: 490 HHLVGEEGHRHDPPHLAPVVAVHREHHVLSLAGEDVEDDVAGAGAELDALGVEDLLGELG 311
Query: 328 RRDHHQVALPHPEEEDVAELAGQRGEVAVVEVVADLQPVPEDGHGDGAGRQPELAATDLX 149
D HQVA H EEE +AE GQ +VAVVEVVADLQPV +DG GAG + E A +L
Sbjct: 310 AGDDHQVADAHAEEEHLAEPLGQAHQVAVVEVVADLQPVADDGGAGGAGWEAEALAGELG 131
Query: 148 XXXXXXXXRQEADQELLHEEKDHGDGAEMEGGLAC 44
+EA Q LL EE H + G AC
Sbjct: 130 YGDGQHRRGEEAQQGLLQEEDVHRGVGAVCGSCAC 26
Score = 92.3 bits (195), Expect = 8e-018
Identities = 37/44 (84%), Positives = 37/44 (84%)
Frame = +1 / +1
Query: 370 VRLPHPQRGLRHLHGQGAGHGVHRVRRPLAQDAPHHDRALLHQQ 501
VRLPHPQR LRHLH QG GHGVH VRRPLAQDA HD ALLHQQ
Sbjct: 352 VRLPHPQRRLRHLHRQGTGHGVHGVRRPLAQDAADHDGALLHQQ 483
Score = 33.6 bits (67), Expect = 3.5
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +1 / -2
Query: 61 PSPPRRHGPSLRGEAPGRPLGVRHG 135
P+PPRR GP+ GRP G R G
Sbjct: 119 PAPPRRRGPAGPSPGGGRPSGGRRG 45
Score = 33.1 bits (66), Expect = 4.8
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = +3 / +3
Query: 423 RTWCSPCTATTG 458
RTWCS CTATTG
Sbjct: 405 RTWCSRCTATTG 440
>gb|BI960006.1|BI960006 HVSMEn0022N09f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0022N09f, mRNA sequence
Length = 626
Score = 246 bits (532), Expect = 3e-064
Identities = 102/136 (75%), Positives = 114/136 (83%)
Frame = +2 / +3
Query: 122 ASVMVAIAVSKIRGRKLRLXXXXXXXXXFGNWLQVGDDLNHRNLAALSRKFGDVFLLRMG 301
A+ ++AIAV+K+ G++ RL GNWLQVGDDLNHRNL L+++FG+VFLLRMG
Sbjct: 105 AAAVLAIAVAKLAGKRFRLPPGPSGAPIVGNWLQVGDDLNHRNLMGLAKRFGEVFLLRMG 284
Query: 302 QRNLVVVSSPPLAREVLHTQGVEFGSRTRNVVFDIFTDKGQDMVFTVYGDHWRKMRRIMT 481
RNLVVVSSP LA+EVLHTQGVEFGSRTRNVVFDIFT KGQDMVFTVYGDHWRKMRRIMT
Sbjct: 285 VRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGDHWRKMRRIMT 464
Query: 482 VPFFTNKVVQQYRHGW 529
VPFFTNKVV R GW
Sbjct: 465 VPFFTNKVVAHNRVGW 512
Score = 229 bits (494), Expect = 4e-059
Identities = 102/149 (68%), Positives = 110/149 (73%)
Frame = -1 / -2
Query: 525 PWRYCCTTLLVKKGTVMMRRILRQWSPYTVNTMSCPLSVKMSKTTLRVREPNSTPCVWST 346
P R C TTLLVKKGTVM+RRILRQWSPYTVNTMSCPL VKMSKTTLRVREPNSTP VW T
Sbjct: 508 PTRLCATTLLVKKGTVMIRRILRQWSPYTVNTMSCPLPVKMSKTTLRVREPNSTPWVWRT 329
Query: 345 SRASGGDETTTRLRCPIRRRKTSPNLRDSAARLRWLRSSPTCSQFPKXXXXXXXXGSRSL 166
S AS G ETTTRLR P+RRR TSPN RLRWLRSSPTCSQ P G R
Sbjct: 328 SLASSGLETTTRLRTPMRRRNTSPNRLARPIRLRWLRSSPTCSQLPTMGAPEGPGGRRKR 149
Query: 165 RPRILDTAMATMTDAKRPTRSFSTKRRTM 79
P L TAMA+ AKRP+R+FS +R ++
Sbjct: 148 LPASLATAMASTAAAKRPSRAFSRRRTSI 62
Score = 179 bits (385), Expect = 5e-044
Identities = 88/155 (56%), Positives = 96/155 (61%)
Frame = -3 / -1
Query: 508 HDLVGEEGHGHDAAHLAPVVAVHGEHHVLPLVREDVEDHVAGAGAELHALRVEHLPRQRR 329
H LVGEEGH HD HLAPVVAVH EHHVL L EDVED VAGAGAEL AL VE L +
Sbjct: 491 HHLVGEEGHRHDPPHLAPVVAVHREHHVLSLAGEDVEDDVAGAGAELDALGVEDLLGELG 312
Query: 328 RRDHHQVALPHPEEEDVAELAGQRGEVAVVEVVADLQPVPEDGHGDGAGRQPELAATDLX 149
D HQVA H EEE +AE GQ +VAVVEVVADLQPV +DG GAG + E A +L
Sbjct: 311 AGDDHQVADAHAEEEHLAEPLGQAHQVAVVEVVADLQPVADDGGAGGAGWEAEALAGELG 132
Query: 148 XXXXXXXXRQEADQELLHEEKDHGDGAEMEGGLAC 44
+EA Q LL EE H + G AC
Sbjct: 131 YGDGQHRRGEEAQQGLLQEEDVHRGVGAVCGSCAC 27
Score = 92.3 bits (195), Expect = 8e-018
Identities = 37/44 (84%), Positives = 37/44 (84%)
Frame = +1 / +2
Query: 370 VRLPHPQRGLRHLHGQGAGHGVHRVRRPLAQDAPHHDRALLHQQ 501
VRLPHPQR LRHLH QG GHGVH VRRPLAQDA HD ALLHQQ
Sbjct: 353 VRLPHPQRRLRHLHRQGTGHGVHGVRRPLAQDAADHDGALLHQQ 484
Score = 33.6 bits (67), Expect = 3.5
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +1 / -3
Query: 61 PSPPRRHGPSLRGEAPGRPLGVRHG 135
P+PPRR GP+ GRP G R G
Sbjct: 120 PAPPRRRGPAGPSPGGGRPSGGRRG 46
Score = 33.1 bits (66), Expect = 4.8
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = +3 / +1
Query: 423 RTWCSPCTATTG 458
RTWCS CTATTG
Sbjct: 406 RTWCSRCTATTG 441
>gb|CA025677.1|CA025677 HZ52M20r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ52M20
5-PRIME, mRNA sequence
Length = 465
Score = 246 bits (532), Expect = 3e-064
Identities = 103/149 (69%), Positives = 112/149 (75%)
Frame = +2 / +2
Query: 1139 LPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWYLANNPDSWXXX 1318
LPYLQ+V+KETLRLRMAIPLLVPHMNL DAKL GYDIPAESKILVNAW+LAN+P W
Sbjct: 2 LPYLQSVVKETLRLRMAIPLLVPHMNLSDAKLAGYDIPAESKILVNAWFLANDPKRWVRA 181
Query: 1319 XXXXXXXXXXXXKHVEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPP 1498
K VEA+GNDFR++PFGVGRRSCP RLVQNFELLPP
Sbjct: 182 DEFRPERFLEEEKSVEAHGNDFRFVPFGVGRRSCPGIILALPIIGITLGRLVQNFELLPP 361
Query: 1499 PGQDKVDTTEKGGQFSLHILKHSTIVCKP 1585
PGQDK+DTTEK GQFS ILKH+TIVCKP
Sbjct: 362 PGQDKIDTTEKPGQFSNQILKHATIVCKP 448
Score = 210 bits (454), Expect = 1e-053
Identities = 99/149 (66%), Positives = 102/149 (68%)
Frame = -1 / -1
Query: 1584 GLHTMVECFKMWRLNWPPFSVVSTLSCPGGGSSSKFWTRRPMVMPRMGRARMIPGQLLRP 1405
GL TMV C ++W LN P FSVVS LSCPGGGSSSKF TRRP VMP MG ARMIPGQL RP
Sbjct: 447 GLQTMVACLRIWLLNCPGFSVVSILSCPGGGSSSKFCTRRPSVMPMMGSARMIPGQLRRP 268
Query: 1404 TPKGRYLKSLPLASTCFXXXXXXXXXXXXXXXXXXXXLARYQALTRILLSAGMSXPPSLA 1225
TPKG KSLP AST F LAR QALTRIL SAGMS P SLA
Sbjct: 267 TPKGTNRKSLPWASTDFSSSRKRSGLNSSARTHRLGSLARNQALTRILDSAGMS*PASLA 88
Query: 1224 SWRFMCGTSSGMAIRSRSVSLITACR*GR 1138
S RFMCGT SGMA+R RSVS T CR*GR
Sbjct: 87 SLRFMCGTRSGMAMRRRSVSFTTDCR*GR 1
Score = 69.3 bits (145), Expect(2) = 2e-018
Identities = 27/39 (69%), Positives = 31/39 (79%)
Frame = -3 / -3
Query: 1255 GGDVVXAELGVVEVHVRHQQRDGHPQPQRLLDHRLQVGE 1139
GGDVV ELG+ EVHVRHQ+RDGH + +RLL LQVGE
Sbjct: 118 GGDVVTGELGIAEVHVRHQERDGHAEAERLLHDGLQVGE 2
Score = 46.9 bits (96), Expect(2) = 2e-018
Identities = 17/32 (53%), Positives = 20/32 (62%)
Frame = -2 / -2
Query: 1601 ALKAFLACTRWWNASRCGD*TGLPSRWCXPCP 1506
++K +AC RWW A G *T L SRWC CP
Sbjct: 464 SIKPRVACRRWWRA*GSGC*TALASRWCRSCP 369
Score = 46.4 bits (95), Expect = 5e-004
Identities = 19/40 (47%), Positives = 21/40 (52%)
Frame = +1 / +1
Query: 1477 ELXXXXXXXXGQGXHHREGRPVQSPHLEAFHHRVQAKNAL 1596
EL GQ HHRE R VQ P +A HHR+QA L
Sbjct: 340 ELRAAAAAGAGQDRHHREARAVQQPDPQARHHRLQATRGL 459
Score = 42.3 bits (86), Expect = 0.008
Identities = 20/37 (54%), Positives = 23/37 (62%)
Frame = -3 / -3
Query: 1585 WLAHDGGMLQDVETELASXXXXXXXXLPGRRQQLEVL 1475
WLA DGG+L+D+ EL LP RRQQLEVL
Sbjct: 448 WLADDGGVLEDLVAELPWLLGGVDLVLPRRRQQLEVL 338
>gb|BQ471406.1|BQ471406 HV02F12r HV Hordeum vulgare subsp. vulgare cDNA clone HV02F12
5-PRIME, mRNA sequence
Length = 457
Score = 239 bits (516), Expect = 4e-062
Identities = 99/129 (76%), Positives = 111/129 (86%)
Frame = +2 / +3
Query: 122 ASVMVAIAVSKIRGRKLRLXXXXXXXXXFGNWLQVGDDLNHRNLAALSRKFGDVFLLRMG 301
A+ ++AIAV+K+ G++ RL GNWLQVGDDLNHRNL L+++FG+VFLLRMG
Sbjct: 69 AAAVLAIAVAKLAGKRFRLPPGPSGAPIVGNWLQVGDDLNHRNLMGLAKRFGEVFLLRMG 248
Query: 302 QRNLVVVSSPPLAREVLHTQGVEFGSRTRNVVFDIFTDKGQDMVFTVYGDHWRKMRRIMT 481
RNLVVVSSP LA+EVLHTQGVEFGSRTRNVVFDIFT KGQDMVFTVYGDHWRKMRRIMT
Sbjct: 249 VRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGDHWRKMRRIMT 428
Query: 482 VPFFTNKVV 508
VPFFTNKVV
Sbjct: 429 VPFFTNKVV 455
Score = 221 bits (476), Expect = 1e-056
Identities = 99/143 (69%), Positives = 107/143 (74%)
Frame = -1 / -1
Query: 507 TTLLVKKGTVMMRRILRQWSPYTVNTMSCPLSVKMSKTTLRVREPNSTPCVWSTSRASGG 328
TTLLVKKGTVM+RRILRQWSPYTVNTMSCPL VKMSKTTLRVREPNSTP VW TS AS G
Sbjct: 454 TTLLVKKGTVMIRRILRQWSPYTVNTMSCPLPVKMSKTTLRVREPNSTPWVWRTSLASSG 275
Query: 327 DETTTRLRCPIRRRKTSPNLRDSAARLRWLRSSPTCSQFPKXXXXXXXXGSRSLRPRILD 148
ETTTRLR P+RRR TSPN RLRWLRSSPTCSQ P G R P L
Sbjct: 274 LETTTRLRTPMRRRNTSPNRLARPIRLRWLRSSPTCSQLPTMGAPEGPGGRRKRLPASLA 95
Query: 147 TAMATMTDAKRPTRSFSTKRRTM 79
TAMA+ AKRP+R+FS +R ++
Sbjct: 94 TAMASTAAAKRPSRAFSRRRTSI 26
Score = 175 bits (377), Expect = 6e-043
Identities = 85/143 (59%), Positives = 92/143 (64%)
Frame = -3 / -3
Query: 508 HDLVGEEGHGHDAAHLAPVVAVHGEHHVLPLVREDVEDHVAGAGAELHALRVEHLPRQRR 329
H LVGEEGH HD HLAPVVAVH EHHVL L EDVED VAGAGAEL AL VE L +
Sbjct: 455 HHLVGEEGHRHDPPHLAPVVAVHREHHVLSLAGEDVEDDVAGAGAELDALGVEDLLGELG 276
Query: 328 RRDHHQVALPHPEEEDVAELAGQRGEVAVVEVVADLQPVPEDGHGDGAGRQPELAATDLX 149
D HQVA H EEE +AE GQ +VAVVEVVADLQPV +DG GAG + E A +L
Sbjct: 275 AGDDHQVADAHAEEEHLAEPLGQAHQVAVVEVVADLQPVADDGGAGGAGWEAEALAGELG 96
Query: 148 XXXXXXXXRQEADQELLHEEKDH 80
+EA Q LL EE H
Sbjct: 95 YGDGQHRRGEEAQQGLLQEEDVH 27
Score = 92.3 bits (195), Expect = 8e-018
Identities = 37/44 (84%), Positives = 37/44 (84%)
Frame = +1 / +2
Query: 370 VRLPHPQRGLRHLHGQGAGHGVHRVRRPLAQDAPHHDRALLHQQ 501
VRLPHPQR LRHLH QG GHGVH VRRPLAQDA HD ALLHQQ
Sbjct: 317 VRLPHPQRRLRHLHRQGTGHGVHGVRRPLAQDAADHDGALLHQQ 448
Score = 33.1 bits (66), Expect = 4.8
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = +3 / +1
Query: 423 RTWCSPCTATTG 458
RTWCS CTATTG
Sbjct: 370 RTWCSRCTATTG 405
>gb|BF257700.2|BF257700 HVSMEf0013K04f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0013K04f, mRNA sequence
Length = 493
Score = 168 bits (361), Expect(3) = 8e-061
Identities = 66/102 (64%), Positives = 86/102 (84%)
Frame = +2 / +2
Query: 563 RLDPKAATDGIVLRRRLQLMMYNNVYRIMFDRRFESMDDPLFLRLRALNGERSRLAQSFE 742
R DP AAT G+V+RR LQLMMYN+++RIMFDRRFE++ DPLF +L+ALN ERS L+QSF+
Sbjct: 137 RADPAAATKGVVVRRXLQLMMYNDMFRIMFDRRFETVADPLFNQLKALNAERSILSQSFD 316
Query: 743 YNYGDFIPILRPFLRGYLRVCKEVKETRLKLFKDFFLEERKK 868
YNYGDFIP+LRPFLR YL C +K R+K+F+D F+++RK+
Sbjct: 317 YNYGDFIPVLRPFLRRYLNRCTNLKTKRMKVFEDHFVQQRKE 442
Score = 88.1 bits (186), Expect(3) = 8e-061
Identities = 35/43 (81%), Positives = 39/43 (90%)
Frame = +2 / +2
Query: 209 GNWLQVGDDLNHRNLAALSRKFGDVFLLRMGQRNLVVVSSPPL 337
GNWLQVGDDLNHRNL L+++FG+VFLLRMG RNLVVVSSP L
Sbjct: 8 GNWLQVGDDLNHRNLMGLAKRFGEVFLLRMGVRNLVVVSSPDL 136
Score = 72.1 bits (151), Expect(3) = 1e-020
Identities = 31/46 (67%), Positives = 32/46 (69%)
Frame = -1 / -2
Query: 345 SRASGGDETTTRLRCPIRRRKTSPNLRDSAARLRWLRSSPTCSQFP 208
S G ETTTRLR P+RRR TSPN RLRWLRSSPTCSQ P
Sbjct: 144 SALRSGLETTTRLRTPMRRRNTSPNRLARPIRLRWLRSSPTCSQLP 7
Score = 66.1 bits (138), Expect = 6e-010
Identities = 35/81 (43%), Positives = 39/81 (48%)
Frame = -1 / -2
Query: 759 KSP*LYSKLCXXXXXXXXXXXXXRKSGSSMLSKRRSNMIRYTLLYIMSCRRRRSTIPSVA 580
KSP*L SKL KSGS+ +S RRSNM+R LYIMSC RR+T P VA
Sbjct: 333 KSP*L*SKLWERMLRSALSALSWLKSGSATVSNRRSNMMRNMSLYIMSCSXRRTTTPLVA 154
Query: 579 ALGXXXXXXXXXXXXXSQPWR 517
A G P R
Sbjct: 153 AAGSALRSGLETTTRLRTPMR 91
Score = 59.7 bits (124), Expect = 5e-008
Identities = 27/40 (67%), Positives = 30/40 (75%)
Frame = -3 / -1
Query: 322 DHHQVALPHPEEEDVAELAGQRGEVAVVEVVADLQPVPED 203
D HQVA H EEE +AE GQ +VAVVEVVADLQPV +D
Sbjct: 121 DDHQVADAHAEEEHLAEPLGQAHQVAVVEVVADLQPVADD 2
Score = 48.3 bits (99), Expect(3) = 1e-020
Identities = 18/32 (56%), Positives = 23/32 (71%)
Frame = -3 / -1
Query: 673 HALEAPVEHDPVYVVVHHELQASAEHDSVGGR 578
H LE VEHD +VVVHHELQ ++ H ++G R
Sbjct: 247 HGLEPAVEHDAEHVVVHHELQXASHHHALGRR 152
Score = 35.9 bits (72), Expect = 0.71
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = +1 / +1
Query: 613 AAHDVQQRIPDHVRPALRE 669
AAHDVQ+ +P HVRP +R+
Sbjct: 187 AAHDVQRHVPHHVRPPVRD 243
Score = 22.6 bits (43), Expect(3) = 8e-061
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = +2 / +2
Query: 902 LKCAIDHILE 931
+KCA+DHI E
Sbjct: 464 IKCAMDHIXE 493
Score = 22.6 bits (43), Expect(3) = 1e-020
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -3 / -1
Query: 793 VAAEERTEDGD 761
VAAEE EDGD
Sbjct: 367 VAAEEGAEDGD 335
>gb|BE215541.1|BE215541 HV_CEb0008B12f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0008B12f, mRNA sequence
Length = 531
Score = 230 bits (497), Expect = 2e-059
Identities = 101/132 (76%), Positives = 107/132 (81%)
Frame = -1 / -1
Query: 471 RRILRQWSPYTVNTMSCPLSVKMSKTTLRVREPNSTPCVWSTSRASGGDETTTRLRCPIR 292
RRILRQWSPYTVNTMS P VKMS TTLRVR+PNSTPCV STSRASGGD+TTTRLR P+R
Sbjct: 531 RRILRQWSPYTVNTMSWPSPVKMSNTTLRVRDPNSTPCVCSTSRASGGDDTTTRLRWPMR 352
Query: 291 RRKTSPNLRDSAARLRWLRSSPTCSQFPKXXXXXXXXGSRSLRPRILDTAMATMTDAKRP 112
RR TSPNLR AARLRW RSSPTCSQ PK GS SLRPRILDT MA T A+RP
Sbjct: 351 RRNTSPNLRAIAARLRWFRSSPTCSQLPKMGTGMGPGGSLSLRPRILDTTMAPTTAARRP 172
Query: 111 TRSFSTKRRTMA 76
TRSFSTK ++MA
Sbjct: 171 TRSFSTKTKSMA 136
Score = 228 bits (493), Expect = 6e-059
Identities = 97/116 (83%), Positives = 103/116 (88%)
Frame = +2 / +2
Query: 122 ASVMVAIAVSKIRGRKLRLXXXXXXXXXFGNWLQVGDDLNHRNLAALSRKFGDVFLLRMG 301
A+V+ AI VSKIRGRKLRL FGNWLQVGDDLNHRNLAA++RKFG+VFLLRMG
Sbjct: 182 AAVVGAIVVSKIRGRKLRLPPGPIPVPIFGNWLQVGDDLNHRNLAAMARKFGEVFLLRMG 361
Query: 302 QRNLVVVSSPPLAREVLHTQGVEFGSRTRNVVFDIFTDKGQDMVFTVYGDHWRKMR 469
QRNLVVVSSPPLAREVLHT GVEFGSRTRNVVFDIFT +GQDMVFTVYGDHWRKMR
Sbjct: 362 QRNLVVVSSPPLAREVLHTHGVEFGSRTRNVVFDIFTGEGQDMVFTVYGDHWRKMR 529
Score = 220 bits (474), Expect = 3e-056
Identities = 96/137 (70%), Positives = 105/137 (76%)
Frame = -3 / -3
Query: 466 HLAPVVAVHGEHHVLPLVREDVEDHVAGAGAELHALRVEHLPRQRRRRDHHQVALPHPEE 287
HLAPVVAVHGEHHVL L EDVE HVAGAG ELHA+RV+HLPRQRR R HHQVAL H EE
Sbjct: 526 HLAPVVAVHGEHHVLALAGEDVEHHVAGAGPELHAMRVQHLPRQRRGRHHHQVALAHAEE 347
Query: 286 EDVAELAGQRGEVAVVEVVADLQPVPEDGHGDGAGRQPELAATDLXXXXXXXXXRQEADQ 107
E +AELAG R +VAVV+VVADLQPV EDGH DGA RQP+LAA DL R+EA Q
Sbjct: 346 EHLAELAGHRRQVAVVQVVADLQPVTEDGHRDGARRQPQLAAPDLGHHDGAHHGREEAHQ 167
Query: 106 ELLHEEKDHGDGAEMEG 56
ELLHE++ HG G G
Sbjct: 166 ELLHEDEVHGAGRRGNG 116
Score = 75.8 bits (159), Expect(3) = 1e-022
Identities = 28/33 (84%), Positives = 31/33 (93%)
Frame = +1 / +1
Query: 370 VRLPHPQRGLRHLHGQGAGHGVHRVRRPLAQDA 468
VR+PHPQRG+RHLH +G GHGVHRVRRPLAQDA
Sbjct: 430 VRVPHPQRGVRHLHRRGPGHGVHRVRRPLAQDA 528
Score = 49.6 bits (102), Expect(3) = 1e-022
Identities = 21/28 (75%), Positives = 21/28 (75%)
Frame = +1 / +1
Query: 73 RRHGPSLRGEAPGRPLGVRHGRHRGVQD 156
RRHG LRGEAPG P R GRHRGVQD
Sbjct: 133 RRHGLRLRGEAPGGPPRGRGGRHRGVQD 216
Score = 37.3 bits (75), Expect = 0.27
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +3 / +3
Query: 423 RTWCSPCTATTG 458
RTWCSPCTATTG
Sbjct: 483 RTWCSPCTATTG 518
Score = 24.9 bits (48), Expect(3) = 1e-022
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +3 / +3
Query: 162 AASSGCLPAPSPCP 203
AAS GC APS CP
Sbjct: 222 AAS*GCRRAPSRCP 263
>gb|BQ767330.1|BQ767330 EBro08_SQ008_H18_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ008_H18 5', mRNA sequence
Length = 457
Score = 228 bits (493), Expect = 6e-059
Identities = 93/123 (75%), Positives = 105/123 (85%)
Frame = +2 / +2
Query: 941 KGEINEDNVLFIVENINVAAIETTLWSIEWAVAELVNHPEIQQKLRQELDTVLGPGHQIT 1120
+ I+ D+VL I +NINVA IETTLWSIEW +AELVNHPEIQQKLR+E+ VLGPG +T
Sbjct: 26 RARIDHDSVLCIGKNINVAPIETTLWSIEWGLAELVNHPEIQQKLREEIVAVLGPGTPVT 205
Query: 1121 EPDTHNLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWYLANNP 1300
EPD LPYLQ+V+KETLRLRMAIPLLVPHMNL DAKL GYDIPAESKILVNAW+LAN+P
Sbjct: 206 EPDLERLPYLQSVVKETLRLRMAIPLLVPHMNLSDAKLAGYDIPAESKILVNAWFLANDP 385
Query: 1301 DSW 1309
W
Sbjct: 386 KRW 394
Score = 179 bits (385), Expect = 5e-044
Identities = 87/137 (63%), Positives = 91/137 (66%)
Frame = -1 / -2
Query: 1368 ASTCFXXXXXXXXXXXXXXXXXXXXLARYQALTRILLSAGMSXPPSLASWRFMCGTSSGM 1189
AST F LAR QALTRIL SAGMS P SLAS RFMCGT SGM
Sbjct: 453 ASTDFSSSRKHSGLNSSARTHRLGSLARNQALTRILDSAGMS*PASLASLRFMCGTRSGM 274
Query: 1188 AIRSRSVSLITACR*GRLCVSGSVIWWPGPSTVSSSCRSFCWISGWFTSSATAHSIDHSV 1009
A+R RSVS T CR*GR SGSV PGPST + S RSFCWISGWFTSSA HSIDHSV
Sbjct: 273 AMRRRSVSFTTDCR*GRRSRSGSVTGVPGPSTATISSRSFCWISGWFTSSARPHSIDHSV 94
Query: 1008 VSIAATLMFSTMKSTLS 958
VS+ ATLMF M+ TLS
Sbjct: 93 VSMGATLMFFPMQRTLS 43
Score = 99.1 bits (210), Expect = 7e-020
Identities = 45/88 (51%), Positives = 53/88 (60%)
Frame = -3 / -1
Query: 1255 GGDVVXAELGVVEVHVRHQQRDGHPQPQRLLDHRLQVGEXXXXXXXXXXXRPEHRVXXXX 1076
GGDVV ELG+ EVHVRHQ+RDGH + +RLL LQVGE R +H
Sbjct: 340 GGDVVTGELGIAEVHVRHQERDGHAEAERLLHDGLQVGEALQVRLRHRRARAQHGDDLLA 161
Query: 1075 XXXXXLRVVHQLSDRPLDRPQRGLDRCN 992
LRVVHQL + PLDRPQR L+ C+
Sbjct: 160 QLLLDLRVVHQLREAPLDRPQRRLNGCD 77
Score = 35.4 bits (71), Expect = 0.97
Identities = 17/30 (56%), Positives = 20/30 (66%)
Frame = +1 / +1
Query: 940 EG*DQRGQRALHRREH*RCSDRDHAVVDRV 1029
+G D+ QR LHR EH R + D AVVDRV
Sbjct: 25 KGEDRPRQRPLHREEHQRRTH*DDAVVDRV 114
>gb|BF261377.2|BF261377 HV_CEa0001C01f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0001C01f, mRNA sequence
Length = 839
Score = 226 bits (488), Expect = 3e-058
Identities = 109/207 (52%), Positives = 130/207 (62%)
Frame = +2 / +1
Query: 122 ASVMVAIAVSKIRGRKLRLXXXXXXXXXFGNWLQVGDDLNHRNLAALSRKFGDVFLLRMG 301
A+ +AIAV+K+ G++LRL GNWLQVGDDLNHR L + +FG+ FLLRMG
Sbjct: 109 AAAALAIAVTKLAGKRLRLPPGPYGAPIVGNWLQVGDDLNHRILMGPATRFGEEFLLRMG 288
Query: 302 QRNLVVVSSPPLAREVLHTQGVEFGSRTRNVVFDIFTDKGQDMVFTVYGDHWRKMRRIMT 481
RNLVV+S P L +EVLHTQGV F SRTRNVVFDIFT KG DMVFTVY DHWRKM IMT
Sbjct: 289 VRNLVVLSIPELNKEVLHTQGV*FCSRTRNVVFDIFTRKGHDMVFTVYEDHWRKMPGIMT 468
Query: 482 VPFFTNKVVQQYRHGWXXXXXXXXXXXRLDPKAATDGIVLRRRLQLMMYNNVYRIMFDRR 661
V FFTNKVV R W R P T+G LMM ++V I D
Sbjct: 469 VRFFTNKVVAHNRVLWEEEEPLVPEDLRAHPAVETNGEEPATHDDLMMCSDVLPIKLDPP 648
Query: 662 FESMDDPLFLRLRALNGERSRLAQSFE 742
+E++ DP+ RL A+N R+ QS +
Sbjct: 649 YETVRDPVLNRLTAVNAYRNIRLQSLD 729
Score = 210 bits (454), Expect = 1e-053
Identities = 107/221 (48%), Positives = 125/221 (56%)
Frame = -1 / -1
Query: 741 SKLCXXXXXXXXXXXXXRKSGSSMLSKRRSNMIRYTLLYIMSCRRRRSTIPSVAALGXXX 562
SKLC +GS +S S+++ T L+IM + P V+ G
Sbjct: 728 SKLCNRMLR*ALTAVSRFSTGSRTVS*GGSSLMGNTSLHIMRSS*VAGSSPLVSTAGWAL 549
Query: 561 XXXXXXXXXXSQPWRYCCTTLLVKKGTVMMRRILRQWSPYTVNTMSCPLSVKMSKTTLRV 382
S R C TTLLVKK TVM+ ILRQWS YTVNTMSCPL VKMSKTTLRV
Sbjct: 548 RSSGTSGSSSSHSTRLCATTLLVKKRTVMIPGILRQWSSYTVNTMSCPLRVKMSKTTLRV 369
Query: 381 REPNSTPCVWSTSRASGGDETTTRLRCPIRRRKTSPNLRDSAARLRWLRSSPTCSQFPKX 202
RE N TP VW TS S G + TTRLR PIRRR +SPN R+RWLRSSPTCSQ P
Sbjct: 368 REQN*TPWVWRTSLLSSGMDKTTRLRTPIRRRNSSPNRVAGPIRMRWLRSSPTCSQLPTM 189
Query: 201 XXXXXXXGSRSLRPRILDTAMATMTDAKRPTRSFSTKRRTM 79
G R P L TAMA+ AKRP+R+FS +R ++
Sbjct: 188 GAP*GPGGRRKRLPASLVTAMASAAAAKRPSRAFSRRRTSI 66
Score = 143 bits (306), Expect = 4e-033
Identities = 67/109 (61%), Positives = 74/109 (67%)
Frame = -3 / -3
Query: 508 HDLVGEEGHGHDAAHLAPVVAVHGEHHVLPLVREDVEDHVAGAGAELHALRVEHLPRQRR 329
H LVGEE HGHD HLAPVV VH EHHV+ L EDVED VAGAGAEL AL VE L +
Sbjct: 495 HHLVGEEAHGHDPRHLAPVVLVHREHHVMSLAGEDVEDDVAGAGAELDALGVEDLLVELG 316
Query: 328 RRDHHQVALPHPEEEDVAELAGQRGEVAVVEVVADLQPVPEDGHGDGAG 182
HQVA H +EE +AE G+ + AVVEVVADLQPV +DG G G
Sbjct: 315 DGQDHQVADAHTQEELLAEPRGRAHQDAVVEVVADLQPVADDGGAVGTG 169
Score = 84.0 bits (177), Expect(2) = 5e-018
Identities = 35/44 (79%), Positives = 35/44 (79%)
Frame = +1 / +3
Query: 370 VRLPHPQRGLRHLHGQGAGHGVHRVRRPLAQDAPHHDRALLHQQ 501
V LPHPQR LRHLH QG HGVH VR PLAQDA HDRALLHQQ
Sbjct: 357 VLLPHPQRRLRHLHPQGT*HGVHGVRGPLAQDAGDHDRALLHQQ 488
Score = 28.1 bits (55), Expect(2) = 5e-018
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = +1 / +3
Query: 616 AHDVQQRIPDHVRPALRE 669
+HDVQ+R+ RP+LR+
Sbjct: 603 SHDVQRRVTHQARPSLRD 656
>gb|BG300103.1|BG300103 HVSMEb0011H20f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0011H20f, mRNA sequence
Length = 536
Score = 218 bits (470), Expect(2) = 6e-057
Identities = 95/127 (74%), Positives = 102/127 (80%)
Frame = -1 / -2
Query: 456 QWSPYTVNTMSCPLSVKMSKTTLRVREPNSTPCVWSTSRASGGDETTTRLRCPIRRRKTS 277
+WSPYTVNTMS P VKMS TTLRVR+PNSTPCV STSRASGGD+TTTRLR P+RRR TS
Sbjct: 505 KWSPYTVNTMSWPSPVKMSNTTLRVRDPNSTPCVCSTSRASGGDDTTTRLRWPMRRRNTS 326
Query: 276 PNLRDSAARLRWLRSSPTCSQFPKXXXXXXXXGSRSLRPRILDTAMATMTDAKRPTRSFS 97
PNLR AARLRW RSSPTCSQ PK GS SLRPRILDT MA T A+RPTRSFS
Sbjct: 325 PNLRAIAARLRWFRSSPTCSQLPKMGTGMGPGGSLSLRPRILDTTMAPTTAARRPTRSFS 146
Query: 96 TKRRTMA 76
TK ++MA
Sbjct: 145 TKTKSMA 125
Score = 214 bits (461), Expect(2) = 2e-056
Identities = 92/111 (82%), Positives = 98/111 (88%)
Frame = +2 / +3
Query: 122 ASVMVAIAVSKIRGRKLRLXXXXXXXXXFGNWLQVGDDLNHRNLAALSRKFGDVFLLRMG 301
A+V+ AI VSKIRGRKLRL FGNWLQVGDDLNHRNLAA++RKFG+VFLLRMG
Sbjct: 171 AAVVGAIVVSKIRGRKLRLPPGPIPVPIFGNWLQVGDDLNHRNLAAMARKFGEVFLLRMG 350
Query: 302 QRNLVVVSSPPLAREVLHTQGVEFGSRTRNVVFDIFTDKGQDMVFTVYGDH 454
QRNLVVVSSPPLAREVLHTQGVEFGSRTRNVVFDIFT +G DMVFTVYGDH
Sbjct: 351 QRNLVVVSSPPLAREVLHTQGVEFGSRTRNVVFDIFTGEGXDMVFTVYGDH 503
Score = 209 bits (450), Expect(2) = 8e-054
Identities = 93/136 (68%), Positives = 101/136 (74%)
Frame = -3 / -1
Query: 463 LAPVVAVHGEHHVLPLVREDVEDHVAGAGAELHALRVEHLPRQRRRRDHHQVALPHPEEE 284
L VVAVHGEHHV L EDVE HVAGAG ELHALRV+HLPRQRR R HHQVAL H EEE
Sbjct: 512 LRQVVAVHGEHHVXALAGEDVEHHVAGAGPELHALRVQHLPRQRRGRHHHQVALAHAEEE 333
Query: 283 DVAELAGQRGEVAVVEVVADLQPVPEDGHGDGAGRQPELAATDLXXXXXXXXXRQEADQE 104
+AELAG R +VAVV+VVADLQPV EDGH DGA RQP+LAA DL R+EA QE
Sbjct: 332 HLAELAGHRRQVAVVQVVADLQPVAEDGHRDGARRQPQLAAPDLGHHDGAHHGREEAHQE 153
Query: 103 LLHEEKDHGDGAEMEG 56
LLHE++ HG G G
Sbjct: 152 LLHEDEVHGAGRRGNG 105
Score = 63.8 bits (133), Expect(4) = 1e-021
Identities = 23/29 (79%), Positives = 26/29 (89%)
Frame = +1 / +2
Query: 370 VRLPHPQRGLRHLHGQGAGHGVHRVRRPL 456
VR+PHPQRG+RHLH +G HGVHRVRRPL
Sbjct: 419 VRVPHPQRGVRHLHRRGPXHGVHRVRRPL 505
Score = 49.6 bits (102), Expect(4) = 1e-021
Identities = 21/28 (75%), Positives = 21/28 (75%)
Frame = +1 / +2
Query: 73 RRHGPSLRGEAPGRPLGVRHGRHRGVQD 156
RRHG LRGEAPG P R GRHRGVQD
Sbjct: 122 RRHGLRLRGEAPGGPPRGRGGRHRGVQD 205
Score = 32.2 bits (64), Expect = 9.0
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +3 / +1
Query: 426 TWCSPCTATT 455
TWCSPCTATT
Sbjct: 475 TWCSPCTATT 504
Score = 27.2 bits (53), Expect(2) = 2e-056
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +1 / +3
Query: 454 LAQDAPHHDRA 486
LAQDA HHDRA
Sbjct: 504 LAQDAAHHDRA 536
Score = 26.3 bits (51), Expect(4) = 1e-021
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = +2 / +1
Query: 455 WRKMRRIMTV 484
WR+MRRIMTV
Sbjct: 505 WRRMRRIMTV 534
Score = 24.9 bits (48), Expect(4) = 1e-021
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +3 / +1
Query: 162 AASSGCLPAPSPCP 203
AAS GC APS CP
Sbjct: 211 AAS*GCRRAPSRCP 252
Score = 24.4 bits (47), Expect(2) = 6e-057
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = -1 / -1
Query: 483 TVMMRRILRQ 454
TVMMRRILRQ
Sbjct: 533 TVMMRRILRQ 504
Score = 23.1 bits (44), Expect(2) = 8e-054
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -2 / -2
Query: 485 ARS*CGASCA 456
ARS*C ASCA
Sbjct: 535 ARS*CAASCA 506
>gb|BF261518.2|BF261518 HV_CEa0001H23f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0001H23f, mRNA sequence
Length = 602
Score = 221 bits (477), Expect = 1e-056
Identities = 92/128 (71%), Positives = 106/128 (82%)
Frame = +2 / +2
Query: 122 ASVMVAIAVSKIRGRKLRLXXXXXXXXXFGNWLQVGDDLNHRNLAALSRKFGDVFLLRMG 301
A+ ++AIAV+K+ G++ RL GNWLQVGDDLNHRNL L+++FG+VFLLRMG
Sbjct: 119 AAAVLAIAVAKLAGKRFRLPPGPSGAPIVGNWLQVGDDLNHRNLMGLAKRFGEVFLLRMG 298
Query: 302 QRNLVVVSSPPLAREVLHTQGVEFGSRTRNVVFDIFTDKGQDMVFTVYGDHWRKMRRIMT 481
RNLVVVSSP LA+EVLHTQGV+FGSRTRNVVFDI T KGQDM FTVYGDHWRK R IMT
Sbjct: 299 VRNLVVVSSPELAKEVLHTQGVQFGSRTRNVVFDILTGKGQDMGFTVYGDHWRKNRLIMT 478
Query: 482 VPFFTNKV 505
VPFFT+KV
Sbjct: 479 VPFFTSKV 502
Score = 204 bits (440), Expect = 1e-051
Identities = 92/142 (64%), Positives = 101/142 (71%)
Frame = -1 / -3
Query: 504 TLLVKKGTVMMRRILRQWSPYTVNTMSCPLSVKMSKTTLRVREPNSTPCVWSTSRASGGD 325
TLLVKKGTVM+ R LRQWSPYTVN MSCPL VKMS TTLRVREPN TP VW TS AS G
Sbjct: 501 TLLVKKGTVMISRFLRQWSPYTVNPMSCPLPVKMSNTTLRVREPNWTPWVWRTSLASSGL 322
Query: 324 ETTTRLRCPIRRRKTSPNLRDSAARLRWLRSSPTCSQFPKXXXXXXXXGSRSLRPRILDT 145
+TTTRLR P+RRR TSPN RLRWLRSSPTCSQ P G R P L T
Sbjct: 321 DTTTRLRTPMRRRNTSPNRLARPIRLRWLRSSPTCSQLPTMGAPEGPGGRRKRLPASLAT 142
Query: 144 AMATMTDAKRPTRSFSTKRRTM 79
AMA+ AKRP+R+FS +R ++
Sbjct: 141 AMASTAAAKRPSRAFSRRRTSI 76
Score = 150 bits (323), Expect = 2e-035
Identities = 80/153 (52%), Positives = 89/153 (58%)
Frame = -3 / -2
Query: 502 LVGEEGHGHDAAHLAPVVAVHGEHHVLPLVREDVEDHVAGAGAELHALRVEHLPRQRRRR 323
L G+EGH HD LAPVVAVH E HVL L DVE VAGAGAEL AL VE L +
Sbjct: 499 LAGKEGHCHDQPILAPVVAVHREPHVLSLAG*DVEHDVAGAGAELDALGVEDLLGELGAG 320
Query: 322 DHHQVALPHPEEEDVAELAGQRGEVAVVEVVADLQPVPEDGHGDGAGRQPELAATDLXXX 143
HQVA H EEE +AE GQ +VAVVEVVADLQPV +DG GAG + E A +L
Sbjct: 319 YDHQVADAHAEEEHLAEPLGQAHQVAVVEVVADLQPVADDGGAGGAGWEAEALAGELGYG 140
Query: 142 XXXXXXRQEADQELLHEEKDHGDGAEMEGGLAC 44
+EA Q LL EE H + G AC
Sbjct: 139 DGQHRRGEEAQQGLLQEEDVHRGVGAVCGSCAC 41
Score = 82.2 bits (173), Expect = 8e-015
Identities = 32/44 (72%), Positives = 37/44 (84%)
Frame = +1 / +1
Query: 370 VRLPHPQRGLRHLHGQGAGHGVHRVRRPLAQDAPHHDRALLHQQ 501
VRLPHPQR +RHL+ QG GHGVH VRRPLAQ++ HD ALL+QQ
Sbjct: 367 VRLPHPQRRVRHLNRQGTGHGVHGVRRPLAQESADHDSALLYQQ 498
Score = 33.6 bits (67), Expect = 3.5
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +1 / -1
Query: 61 PSPPRRHGPSLRGEAPGRPLGVRHG 135
P+PPRR GP+ GRP G R G
Sbjct: 134 PAPPRRRGPAGPSPGGGRPSGGRRG 60
>gb|CA023650.1|CA023650 HZ46P09r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ46P09
5-PRIME, mRNA sequence
Length = 501
Score = 218 bits (470), Expect = 9e-056
Identities = 94/128 (73%), Positives = 98/128 (76%)
Frame = -1 / -1
Query: 1596 *SVLGLHTMVECFKMWRLNWPPFSVVSTLSCPGGGSSSKFWTRRPMVMPRMGRARMIPGQ 1417
*+ LGL TMVECFKMWRLNWPPFSVVS+LS PGGG S+KFWTRRPMVMPRMG ARM+PGQ
Sbjct: 384 *NTLGLATMVECFKMWRLNWPPFSVVSSLSWPGGGESTKFWTRRPMVMPRMGSARMMPGQ 205
Query: 1416 LLRPTPKGRYLKSLPLASTCFXXXXXXXXXXXXXXXXXXXXLARYQALTRILLSAGMSXP 1237
L RPTPKGRYLKSLPLASTCF LAR QALTRILLSAGM P
Sbjct: 204 LRRPTPKGRYLKSLPLASTCFSSSRKRSGRNSSGRFHCSGLLARNQALTRILLSAGML*P 25
Query: 1236 PSLASWRF 1213
SLASWRF
Sbjct: 24 ASLASWRF 1
Score = 149 bits (319), Expect(2) = 3e-051
Identities = 63/95 (66%), Positives = 65/95 (68%)
Frame = +2 / +2
Query: 1355 KHVEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQDKVDTTEKG 1534
KHVEANGNDFRYLPFGVGRRSCP RLVQNF L PPPGQDK+DTTEKG
Sbjct: 143 KHVEANGNDFRYLPFGVGRRSCPGIILALPILGITIGRLVQNFVLSPPPGQDKLDTTEKG 322
Query: 1535 GQFSLHILKHSTIVCKPRTL*EQPTRRFHAEQSNV 1639
GQFSLHILKHSTIV KPR * R S +
Sbjct: 323 GQFSLHILKHSTIVAKPRVF*SSGVRALGVRASGI 427
Score = 74.4 bits (156), Expect(2) = 3e-051
Identities = 27/32 (84%), Positives = 30/32 (93%)
Frame = +2 / +2
Query: 1214 NLHDAKLGGYDIPAESKILVNAWYLANNPDSW 1309
NLHDAKL GY+IPAESKILVNAW+LANNP+ W
Sbjct: 2 NLHDAKLAGYNIPAESKILVNAWFLANNPEQW 97
Score = 59.3 bits (123), Expect(2) = 6e-010
Identities = 24/45 (53%), Positives = 26/45 (57%)
Frame = +1 / +1
Query: 1477 ELXXXXXXXXGQGXHHREGRPVQSPHLEAFHHRVQAKNALRAAHT 1611
EL GQ HH EGRPVQ PHLEA HHR QA++ L T
Sbjct: 265 ELRALAAARPGQARHHGEGRPVQPPHLEALHHRGQAQSVLEQRRT 399
Score = 52.8 bits (109), Expect(2) = 2e-009
Identities = 18/26 (69%), Positives = 19/26 (73%)
Frame = -2 / -2
Query: 1583 ACTRWWNASRCGD*TGLPSRWCXPCP 1506
A RWW+ASRCG *TG PS WC CP
Sbjct: 371 AWPRWWSASRCGG*TGRPSPWCRACP 294
Score = 48.7 bits (100), Expect = 1e-004
Identities = 24/48 (50%), Positives = 29/48 (60%)
Frame = -3 / -3
Query: 1618 EPTCGLLLKRSWLAHDGGMLQDVETELASXXXXXXXXLPGRRQQLEVL 1475
E T L+ S L HDGG+LQDVE ELA+ L GRR++ EVL
Sbjct: 406 ESTYAAALEHSGLGHDGGVLQDVEAELAALLRGVELVLAGRRREHEVL 263
Score = 33.1 bits (66), Expect(2) = 2e-009
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = -3 / -3
Query: 1261 ALGGDVVXAELGVVEV 1214
ALGGDVV ELGVVEV
Sbjct: 49 ALGGDVVAGELGVVEV 2
Score = 25.4 bits (49), Expect(2) = 6e-010
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +1 / +1
Query: 1387 VPALRRRPQEL 1419
VPALRRRP EL
Sbjct: 175 VPALRRRPPEL 207
>gb|BF253649.2|BF253649 HVSMEf0001L18f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEf0001L18f, mRNA sequence
Length = 530
Score = 215 bits (465), Expect = 4e-055
Identities = 88/112 (78%), Positives = 100/112 (89%)
Frame = +2 / +1
Query: 929 EAQQKGEINEDNVLFIVENINVAAIETTLWSIEWAVAELVNHPEIQQKLRQELDTVLGPG 1108
EA++KGEIN DNVL+IVENINVAAIETTLWSIEW +AELVNHPEIQQKLR+E+ VLGPG
Sbjct: 1 EAERKGEINHDNVLYIVENINVAAIETTLWSIEWGLAELVNHPEIQQKLREEIVAVLGPG 180
Query: 1109 HQITEPDTHNLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESK 1264
+TEPD LPYLQ+V+KETL LRMAIPLL PHMNL+DAKL GYDIPA+S+
Sbjct: 181 TPVTEPDLERLPYLQSVVKETLPLRMAIPLLGPHMNLNDAKLAGYDIPADSR 336
Score = 176 bits (378), Expect = 4e-043
Identities = 82/111 (73%), Positives = 85/111 (76%)
Frame = -1 / -1
Query: 1263 LLSAGMSXPPSLASWRFMCGTSSGMAIRSRSVSLITACR*GRLCVSGSVIWWPGPSTVSS 1084
L SAGMS P SLAS RFMCG SGMA+RS SVS T CR*GR SGSV PGPST +
Sbjct: 335 LESAGMSYPASLASLRFMCGPRSGMAMRSGSVSFTTDCR*GRRSRSGSVTGVPGPSTATI 156
Query: 1083 SCRSFCWISGWFTSSATAHSIDHSVVSIAATLMFSTMKSTLSSLISPFCCA 931
S RSFCWISGWFTSSA HSIDHSVVS+AATLMFSTM TLS LISPF A
Sbjct: 155 SSRSFCWISGWFTSSARPHSIDHSVVSMAATLMFSTM*RTLSWLISPFLSA 3
Score = 95.9 bits (203), Expect = 6e-019
Identities = 45/89 (50%), Positives = 54/89 (60%)
Frame = -3 / -3
Query: 1258 LGGDVVXAELGVVEVHVRHQQRDGHPQPQRLLDHRLQVGEXXXXXXXXXXXRPEHRVXXX 1079
+GGDVV ELG+VEVHVR Q+RDGH + +RLL LQVGE R +H
Sbjct: 330 IGGDVVPGELGIVEVHVRPQERDGHAERERLLHDGLQVGEALQVRLRHRRARAQHGDDLL 151
Query: 1078 XXXXXXLRVVHQLSDRPLDRPQRGLDRCN 992
LRVVHQL + PLDRPQR L+ C+
Sbjct: 150 AQLLLDLRVVHQLREAPLDRPQRRLNGCD 64
Score = 42.8 bits (87), Expect = 0.006
Identities = 21/30 (70%), Positives = 21/30 (70%)
Frame = +1 / +3
Query: 940 EG*DQRGQRALHRREH*RCSDRDHAVVDRV 1029
EG DQ QR LHRREH R S D AVVDRV
Sbjct: 12 EGRDQPRQRPLHRREHQRRSH*DDAVVDRV 101
>gb|AV921527.1|AV921527 AV921527 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags23l19 3', mRNA sequence
Length = 598
Score = 213 bits (459), Expect = 3e-054
Identities = 89/133 (66%), Positives = 96/133 (72%)
Frame = +2 / -1
Query: 1187 AIPLLVPHMNLHDAKLGGYDIPAESKILVNAWYLANNPDSWXXXXXXXXXXXXXXXKHVE 1366
AIPLLVPHMNL DAKL GYDIPAESKILVNAW+LAN+P W K VE
Sbjct: 598 AIPLLVPHMNLSDAKLAGYDIPAESKILVNAWFLANDPKRWVRADEFRPERFLEEEKSVE 419
Query: 1367 ANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQDKVDTTEKGGQFS 1546
A+GNDFR++PFGVGRRSCP RLVQNFELLPPPGQDK+DTTEK GQFS
Sbjct: 418 AHGNDFRFVPFGVGRRSCPGIILALPIIGITLGRLVQNFELLPPPGQDKIDTTEKPGQFS 239
Query: 1547 LHILKHSTIVCKP 1585
ILKH+TIVCKP
Sbjct: 238 NQILKHATIVCKP 200
Score = 186 bits (400), Expect = 4e-046
Identities = 87/132 (65%), Positives = 89/132 (67%)
Frame = -1 / +3
Query: 1584 GLHTMVECFKMWRLNWPPFSVVSTLSCPGGGSSSKFWTRRPMVMPRMGRARMIPGQLLRP 1405
GL TMV C ++W LN P FSVVS LSCPGGGSSSKF TRRP VMP MG ARMIPGQL RP
Sbjct: 201 GLQTMVACLRIWLLNCPGFSVVSILSCPGGGSSSKFCTRRPSVMPMMGSARMIPGQLRRP 380
Query: 1404 TPKGRYLKSLPLASTCFXXXXXXXXXXXXXXXXXXXXLARYQALTRILLSAGMSXPPSLA 1225
TPKG KSLP AST F LAR QALTRIL SAGMS P SLA
Sbjct: 381 TPKGTNRKSLPWASTDFSSSRKRSGLNSSARTHRLGSLARNQALTRILDSAGMS*PASLA 560
Query: 1224 SWRFMCGTSSGM 1189
S RFMCGT SGM
Sbjct: 561 SLRFMCGTRSGM 596
Score = 49.6 bits (102), Expect(2) = 2e-012
Identities = 18/23 (78%), Positives = 20/23 (86%)
Frame = -3 / +2
Query: 1255 GGDVVXAELGVVEVHVRHQQRDG 1187
GGDVV ELG+ EVHVRHQ+RDG
Sbjct: 530 GGDVVTGELGIAEVHVRHQERDG 598
Score = 46.9 bits (96), Expect(2) = 2e-012
Identities = 17/32 (53%), Positives = 20/32 (62%)
Frame = -2 / +1
Query: 1601 ALKAFLACTRWWNASRCGD*TGLPSRWCXPCP 1506
++K +AC RWW A G *T L SRWC CP
Sbjct: 184 SIKPRVACRRWWRA*GSGC*TALASRWCRSCP 279
Score = 46.4 bits (95), Expect = 5e-004
Identities = 19/40 (47%), Positives = 21/40 (52%)
Frame = +1 / -3
Query: 1477 ELXXXXXXXXGQGXHHREGRPVQSPHLEAFHHRVQAKNAL 1596
EL GQ HHRE R VQ P +A HHR+QA L
Sbjct: 308 ELRAAAAAGAGQDRHHREARAVQQPDPQARHHRLQATRGL 189
Score = 42.3 bits (86), Expect = 0.008
Identities = 20/37 (54%), Positives = 23/37 (62%)
Frame = -3 / +2
Query: 1585 WLAHDGGMLQDVETELASXXXXXXXXLPGRRQQLEVL 1475
WLA DGG+L+D+ EL LP RRQQLEVL
Sbjct: 200 WLADDGGVLEDLVAELPWLLGGVDLVLPRRRQQLEVL 310
>gb|AV922603.1|AV922603 AV922603 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags18n15 3', mRNA sequence
Length = 615
Score = 213 bits (459), Expect = 3e-054
Identities = 89/133 (66%), Positives = 96/133 (72%)
Frame = +2 / -1
Query: 1187 AIPLLVPHMNLHDAKLGGYDIPAESKILVNAWYLANNPDSWXXXXXXXXXXXXXXXKHVE 1366
AIPLLVPHMNL DAKL GYDIPAESKILVNAW+LAN+P W K VE
Sbjct: 615 AIPLLVPHMNLSDAKLAGYDIPAESKILVNAWFLANDPKRWVRADEFRPERFLEEEKSVE 436
Query: 1367 ANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQDKVDTTEKGGQFS 1546
A+GNDFR++PFGVGRRSCP RLVQNFELLPPPGQDK+DTTEK GQFS
Sbjct: 435 AHGNDFRFVPFGVGRRSCPGIILALPIIGITLGRLVQNFELLPPPGQDKIDTTEKPGQFS 256
Query: 1547 LHILKHSTIVCKP 1585
ILKH+TIVCKP
Sbjct: 255 NQILKHATIVCKP 217
Score = 186 bits (400), Expect = 4e-046
Identities = 87/132 (65%), Positives = 89/132 (67%)
Frame = -1 / +2
Query: 1584 GLHTMVECFKMWRLNWPPFSVVSTLSCPGGGSSSKFWTRRPMVMPRMGRARMIPGQLLRP 1405
GL TMV C ++W LN P FSVVS LSCPGGGSSSKF TRRP VMP MG ARMIPGQL RP
Sbjct: 218 GLQTMVACLRIWLLNCPGFSVVSILSCPGGGSSSKFCTRRPSVMPMMGSARMIPGQLRRP 397
Query: 1404 TPKGRYLKSLPLASTCFXXXXXXXXXXXXXXXXXXXXLARYQALTRILLSAGMSXPPSLA 1225
TPKG KSLP AST F LAR QALTRIL SAGMS P SLA
Sbjct: 398 TPKGTNRKSLPWASTDFSSSRKRSGLNSSARTHRLGSLARNQALTRILDSAGMS*PASLA 577
Query: 1224 SWRFMCGTSSGM 1189
S RFMCGT SGM
Sbjct: 578 SLRFMCGTRSGM 613
Score = 49.6 bits (102), Expect(2) = 2e-012
Identities = 18/23 (78%), Positives = 20/23 (86%)
Frame = -3 / +1
Query: 1255 GGDVVXAELGVVEVHVRHQQRDG 1187
GGDVV ELG+ EVHVRHQ+RDG
Sbjct: 547 GGDVVTGELGIAEVHVRHQERDG 615
Score = 46.9 bits (96), Expect(2) = 2e-012
Identities = 17/32 (53%), Positives = 20/32 (62%)
Frame = -2 / +3
Query: 1601 ALKAFLACTRWWNASRCGD*TGLPSRWCXPCP 1506
++K +AC RWW A G *T L SRWC CP
Sbjct: 201 SIKPRVACRRWWRA*GSGC*TALASRWCRSCP 296
Score = 46.4 bits (95), Expect = 5e-004
Identities = 19/40 (47%), Positives = 21/40 (52%)
Frame = +1 / -3
Query: 1477 ELXXXXXXXXGQGXHHREGRPVQSPHLEAFHHRVQAKNAL 1596
EL GQ HHRE R VQ P +A HHR+QA L
Sbjct: 325 ELRAAAAAGAGQDRHHREARAVQQPDPQARHHRLQATRGL 206
Score = 42.3 bits (86), Expect = 0.008
Identities = 20/37 (54%), Positives = 23/37 (62%)
Frame = -3 / +1
Query: 1585 WLAHDGGMLQDVETELASXXXXXXXXLPGRRQQLEVL 1475
WLA DGG+L+D+ EL LP RRQQLEVL
Sbjct: 217 WLADDGGVLEDLVAELPWLLGGVDLVLPRRRQQLEVL 327
>gb|AJ436646.1|AJ436646 AJ436646 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200035H01F1, mRNA sequence
Length = 621
Score = 209 bits (451), Expect = 4e-053
Identities = 87/131 (66%), Positives = 94/131 (71%)
Frame = +2 / +3
Query: 1193 PLLVPHMNLHDAKLGGYDIPAESKILVNAWYLANNPDSWXXXXXXXXXXXXXXXKHVEAN 1372
PLLVPHMNL DAKL GYDIPAESKILVNAW+LAN+P W K VEA+
Sbjct: 3 PLLVPHMNLSDAKLAGYDIPAESKILVNAWFLANDPKRWVRADEFRPERFLEEEKSVEAH 182
Query: 1373 GNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQDKVDTTEKGGQFSLH 1552
GNDFR++PFGVGRRSCP RLVQNFELLPPPGQDK+DTTEK GQFS
Sbjct: 183 GNDFRFVPFGVGRRSCPGIILALPIIGITLGRLVQNFELLPPPGQDKIDTTEKPGQFSNQ 362
Query: 1553 ILKHSTIVCKP 1585
ILKH+TIVCKP
Sbjct: 363 ILKHATIVCKP 395
Score = 183 bits (395), Expect = 2e-045
Identities = 86/131 (65%), Positives = 88/131 (67%)
Frame = -1 / -3
Query: 1584 GLHTMVECFKMWRLNWPPFSVVSTLSCPGGGSSSKFWTRRPMVMPRMGRARMIPGQLLRP 1405
GL TMV C ++W LN P FSVVS LSCPGGGSSSKF TRRP VMP MG ARMIPGQL RP
Sbjct: 394 GLQTMVACLRIWLLNCPGFSVVSILSCPGGGSSSKFCTRRPSVMPMMGSARMIPGQLRRP 215
Query: 1404 TPKGRYLKSLPLASTCFXXXXXXXXXXXXXXXXXXXXLARYQALTRILLSAGMSXPPSLA 1225
TPKG KSLP AST F LAR QALTRIL SAGMS P SLA
Sbjct: 214 TPKGTNRKSLPWASTDFSSSRKRSGLNSSARTHRLGSLARNQALTRILDSAGMS*PASLA 35
Query: 1224 SWRFMCGTSSG 1192
S RFMCGT SG
Sbjct: 34 SLRFMCGTRSG 2
Score = 46.9 bits (96), Expect(2) = 7e-011
Identities = 17/32 (53%), Positives = 20/32 (62%)
Frame = -2 / -1
Query: 1601 ALKAFLACTRWWNASRCGD*TGLPSRWCXPCP 1506
++K +AC RWW A G *T L SRWC CP
Sbjct: 411 SIKPRVACRRWWRA*GSGC*TALASRWCRSCP 316
Score = 46.4 bits (95), Expect = 5e-004
Identities = 19/40 (47%), Positives = 21/40 (52%)
Frame = +1 / +2
Query: 1477 ELXXXXXXXXGQGXHHREGRPVQSPHLEAFHHRVQAKNAL 1596
EL GQ HHRE R VQ P +A HHR+QA L
Sbjct: 287 ELRAAAAAGAGQDRHHREARAVQQPDPQARHHRLQATRGL 406
Score = 44.1 bits (90), Expect(2) = 7e-011
Identities = 16/21 (76%), Positives = 18/21 (85%)
Frame = -3 / -2
Query: 1255 GGDVVXAELGVVEVHVRHQQR 1193
GGDVV ELG+ EVHVRHQ+R
Sbjct: 65 GGDVVTGELGIAEVHVRHQER 3
Score = 42.3 bits (86), Expect = 0.008
Identities = 20/37 (54%), Positives = 23/37 (62%)
Frame = -3 / -2
Query: 1585 WLAHDGGMLQDVETELASXXXXXXXXLPGRRQQLEVL 1475
WLA DGG+L+D+ EL LP RRQQLEVL
Sbjct: 395 WLADDGGVLEDLVAELPWLLGGVDLVLPRRRQQLEVL 285
>gb|BJ465891.1|BJ465891 BJ465891 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags27m08 3', mRNA sequence
Length = 577
Score = 206 bits (444), Expect = 3e-052
Identities = 86/130 (66%), Positives = 93/130 (71%)
Frame = +2 / -1
Query: 1196 LLVPHMNLHDAKLGGYDIPAESKILVNAWYLANNPDSWXXXXXXXXXXXXXXXKHVEANG 1375
LLVPHMNL DAKL GYDIPAESKILVNAW+LAN+P W K VEA+G
Sbjct: 577 LLVPHMNLSDAKLAGYDIPAESKILVNAWFLANDPKRWVRADEFRPERFLEEEKSVEAHG 398
Query: 1376 NDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQDKVDTTEKGGQFSLHI 1555
NDFR++PFGVGRRSCP RLVQNFELLPPPGQDK+DTTEK GQFS I
Sbjct: 397 NDFRFVPFGVGRRSCPGIILALPIIGITLGRLVQNFELLPPPGQDKIDTTEKPGQFSNQI 218
Query: 1556 LKHSTIVCKP 1585
LKH+TIVCKP
Sbjct: 217 LKHATIVCKP 188
Score = 179 bits (386), Expect = 3e-044
Identities = 84/128 (65%), Positives = 86/128 (67%)
Frame = -1 / +3
Query: 1584 GLHTMVECFKMWRLNWPPFSVVSTLSCPGGGSSSKFWTRRPMVMPRMGRARMIPGQLLRP 1405
GL TMV C ++W LN P FSVVS LSCPGGGSSSKF TRRP VMP MG ARMIPGQL RP
Sbjct: 189 GLQTMVACLRIWLLNCPGFSVVSILSCPGGGSSSKFCTRRPSVMPMMGSARMIPGQLRRP 368
Query: 1404 TPKGRYLKSLPLASTCFXXXXXXXXXXXXXXXXXXXXLARYQALTRILLSAGMSXPPSLA 1225
TPKG KSLP AST F LAR QALTRIL SAGMS P SLA
Sbjct: 369 TPKGTNRKSLPWASTDFSSSRKRSGLNSSARTHRLGSLARNQALTRILDSAGMS*PASLA 548
Query: 1224 SWRFMCGT 1201
S RFMCGT
Sbjct: 549 SLRFMCGT 572
Score = 46.9 bits (96), Expect(2) = 3e-010
Identities = 17/32 (53%), Positives = 20/32 (62%)
Frame = -2 / +1
Query: 1601 ALKAFLACTRWWNASRCGD*TGLPSRWCXPCP 1506
++K +AC RWW A G *T L SRWC CP
Sbjct: 172 SIKPRVACRRWWRA*GSGC*TALASRWCRSCP 267
Score = 46.4 bits (95), Expect = 5e-004
Identities = 19/40 (47%), Positives = 21/40 (52%)
Frame = +1 / -3
Query: 1477 ELXXXXXXXXGQGXHHREGRPVQSPHLEAFHHRVQAKNAL 1596
EL GQ HHRE R VQ P +A HHR+QA L
Sbjct: 296 ELRAAAAAGAGQDRHHREARAVQQPDPQARHHRLQATRGL 177
Score = 42.3 bits (86), Expect = 0.008
Identities = 20/37 (54%), Positives = 23/37 (62%)
Frame = -3 / +2
Query: 1585 WLAHDGGMLQDVETELASXXXXXXXXLPGRRQQLEVL 1475
WLA DGG+L+D+ EL LP RRQQLEVL
Sbjct: 188 WLADDGGVLEDLVAELPWLLGGVDLVLPRRRQQLEVL 298
Score = 41.8 bits (85), Expect(2) = 3e-010
Identities = 15/20 (75%), Positives = 17/20 (85%)
Frame = -3 / +2
Query: 1255 GGDVVXAELGVVEVHVRHQQ 1196
GGDVV ELG+ EVHVRHQ+
Sbjct: 518 GGDVVTGELGIAEVHVRHQE 577
>gb|BJ467535.1|BJ467535 BJ467535 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags25l03 3', mRNA sequence
Length = 568
Score = 206 bits (444), Expect = 3e-052
Identities = 86/130 (66%), Positives = 93/130 (71%)
Frame = +2 / -3
Query: 1196 LLVPHMNLHDAKLGGYDIPAESKILVNAWYLANNPDSWXXXXXXXXXXXXXXXKHVEANG 1375
LLVPHMNL DAKL GYDIPAESKILVNAW+LAN+P W K VEA+G
Sbjct: 566 LLVPHMNLSDAKLAGYDIPAESKILVNAWFLANDPKRWVRADEFRPERFLEEEKSVEAHG 387
Query: 1376 NDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQDKVDTTEKGGQFSLHI 1555
NDFR++PFGVGRRSCP RLVQNFELLPPPGQDK+DTTEK GQFS I
Sbjct: 386 NDFRFVPFGVGRRSCPGIILALPIIGITLGRLVQNFELLPPPGQDKIDTTEKPGQFSNQI 207
Query: 1556 LKHSTIVCKP 1585
LKH+TIVCKP
Sbjct: 206 LKHATIVCKP 177
Score = 181 bits (389), Expect = 1e-044
Identities = 85/130 (65%), Positives = 87/130 (66%)
Frame = -1 / +1
Query: 1584 GLHTMVECFKMWRLNWPPFSVVSTLSCPGGGSSSKFWTRRPMVMPRMGRARMIPGQLLRP 1405
GL TMV C ++W LN P FSVVS LSCPGGGSSSKF TRRP VMP MG ARMIPGQL RP
Sbjct: 178 GLQTMVACLRIWLLNCPGFSVVSILSCPGGGSSSKFCTRRPSVMPMMGSARMIPGQLRRP 357
Query: 1404 TPKGRYLKSLPLASTCFXXXXXXXXXXXXXXXXXXXXLARYQALTRILLSAGMSXPPSLA 1225
TPKG KSLP AST F LAR QALTRIL SAGMS P SLA
Sbjct: 358 TPKGTNRKSLPWASTDFSSSRKRSGLNSSARTHRLGSLARNQALTRILDSAGMS*PASLA 537
Query: 1224 SWRFMCGTSS 1195
S RFMCGT S
Sbjct: 538 SLRFMCGTRS 567
Score = 46.9 bits (96), Expect(2) = 3e-010
Identities = 17/32 (53%), Positives = 20/32 (62%)
Frame = -2 / +2
Query: 1601 ALKAFLACTRWWNASRCGD*TGLPSRWCXPCP 1506
++K +AC RWW A G *T L SRWC CP
Sbjct: 161 SIKPRVACRRWWRA*GSGC*TALASRWCRSCP 256
Score = 46.4 bits (95), Expect = 5e-004
Identities = 19/40 (47%), Positives = 21/40 (52%)
Frame = +1 / -2
Query: 1477 ELXXXXXXXXGQGXHHREGRPVQSPHLEAFHHRVQAKNAL 1596
EL GQ HHRE R VQ P +A HHR+QA L
Sbjct: 285 ELRAAAAAGAGQDRHHREARAVQQPDPQARHHRLQATRGL 166
Score = 42.3 bits (86), Expect = 0.008
Identities = 20/37 (54%), Positives = 23/37 (62%)
Frame = -3 / +3
Query: 1585 WLAHDGGMLQDVETELASXXXXXXXXLPGRRQQLEVL 1475
WLA DGG+L+D+ EL LP RRQQLEVL
Sbjct: 177 WLADDGGVLEDLVAELPWLLGGVDLVLPRRRQQLEVL 287
Score = 41.8 bits (85), Expect(2) = 3e-010
Identities = 15/20 (75%), Positives = 17/20 (85%)
Frame = -3 / +3
Query: 1255 GGDVVXAELGVVEVHVRHQQ 1196
GGDVV ELG+ EVHVRHQ+
Sbjct: 507 GGDVVTGELGIAEVHVRHQE 566
>gb|BQ471910.1|BQ471910 HV03N12r HV Hordeum vulgare subsp. vulgare cDNA clone HV03N12
5-PRIME, mRNA sequence
Length = 498
Score = 202 bits (435), Expect = 6e-051
Identities = 90/121 (74%), Positives = 96/121 (79%)
Frame = -1 / -1
Query: 438 VNTMSCPLSVKMSKTTLRVREPNSTPCVWSTSRASGGDETTTRLRCPIRRRKTSPNLRDS 259
VNTMS P VKMS TTLRVR+PNSTPCV STSRASGGD+TTTRLR P+RRR TSPNLR
Sbjct: 498 VNTMSWPSPVKMSNTTLRVRDPNSTPCVCSTSRASGGDDTTTRLRWPMRRRNTSPNLRAI 319
Query: 258 AARLRWLRSSPTCSQFPKXXXXXXXXGSRSLRPRILDTAMATMTDAKRPTRSFSTKRRTM 79
AARLRW RSSPTCSQ PK GS SLRPRILDT MA T A+RPTRSFSTK ++M
Sbjct: 318 AARLRWFRSSPTCSQLPKMGTGMGPGGSLSLRPRILDTTMAPTTAARRPTRSFSTKTKSM 139
Query: 78 A 76
A
Sbjct: 138 A 136
Score = 200 bits (431), Expect = 2e-050
Identities = 87/105 (82%), Positives = 93/105 (88%)
Frame = +2 / +2
Query: 122 ASVMVAIAVSKIRGRKLRLXXXXXXXXXFGNWLQVGDDLNHRNLAALSRKFGDVFLLRMG 301
A+V+ AI VSKIRGRKLRL FGNWLQVGDDLNHRNLAA++RKFG+VFLLRMG
Sbjct: 182 AAVVGAIVVSKIRGRKLRLPPGPIPVPIFGNWLQVGDDLNHRNLAAMARKFGEVFLLRMG 361
Query: 302 QRNLVVVSSPPLAREVLHTQGVEFGSRTRNVVFDIFTDKGQDMVF 436
QRNLVVVSSPPLAREVLHTQGVEFGSRTRNVVFDIFT +GQDMVF
Sbjct: 362 QRNLVVVSSPPLAREVLHTQGVEFGSRTRNVVFDIFTGEGQDMVF 496
Score = 196 bits (423), Expect = 3e-049
Identities = 87/127 (68%), Positives = 95/127 (74%)
Frame = -3 / -3
Query: 436 EHHVLPLVREDVEDHVAGAGAELHALRVEHLPRQRRRRDHHQVALPHPEEEDVAELAGQR 257
EHHVL L EDVE HVAGAG ELHALRV+HLPRQRR R HHQVAL H EEE +AELAG R
Sbjct: 496 EHHVLALAGEDVEHHVAGAGPELHALRVQHLPRQRRGRHHHQVALAHAEEEHLAELAGHR 317
Query: 256 GEVAVVEVVADLQPVPEDGHGDGAGRQPELAATDLXXXXXXXXXRQEADQELLHEEKDHG 77
+VAVV+VVADLQPV EDGH DGA RQP+LAA DL R+EA QELLHE++ HG
Sbjct: 316 RQVAVVQVVADLQPVTEDGHRDGARRQPQLAAPDLGHHDGAHHGREEAHQELLHEDEVHG 137
Query: 76 DGAEMEG 56
G G
Sbjct: 136 AGRRGNG 116
Score = 53.3 bits (110), Expect(3) = 3e-016
Identities = 18/23 (78%), Positives = 21/23 (91%)
Frame = +1 / +1
Query: 370 VRLPHPQRGLRHLHGQGAGHGVH 438
VR+PHPQRG+RHLH +G GHGVH
Sbjct: 430 VRVPHPQRGVRHLHRRGPGHGVH 498
Score = 49.6 bits (102), Expect(3) = 3e-016
Identities = 21/28 (75%), Positives = 21/28 (75%)
Frame = +1 / +1
Query: 73 RRHGPSLRGEAPGRPLGVRHGRHRGVQD 156
RRHG LRGEAPG P R GRHRGVQD
Sbjct: 133 RRHGLRLRGEAPGGPPRGRGGRHRGVQD 216
Score = 24.9 bits (48), Expect(3) = 3e-016
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +3 / +3
Query: 162 AASSGCLPAPSPCP 203
AAS GC APS CP
Sbjct: 222 AAS*GCRRAPSRCP 263
>gb|BI777730.2|BI777730 EBro08_SQ001_K12_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ001_K12 5', mRNA sequence
Length = 380
Score = 191 bits (412), Expect = 9e-048
Identities = 79/122 (64%), Positives = 88/122 (72%)
Frame = +2 / +2
Query: 1160 IKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWYLANNPDSWXXXXXXXXXX 1339
++ETLRLRMA+PLLVPHMNL DAKL GYDIPAESKILVNAW+LAN+P W
Sbjct: 14 VRETLRLRMAMPLLVPHMNLSDAKLAGYDIPAESKILVNAWFLANDPKRWVRADEFRPER 193
Query: 1340 XXXXXKHVEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQDKVD 1519
K VEA+GNDFR++PFGVGRRSCP RLVQNFELLPPPGQDK+D
Sbjct: 194 FLEEEKSVEAHGNDFRFVPFGVGRRSCPGIILALPIIGITLGRLVQNFELLPPPGQDKID 373
Query: 1520 TT 1525
TT
Sbjct: 374 TT 379
Score = 167 bits (359), Expect = 2e-040
Identities = 81/120 (67%), Positives = 82/120 (68%)
Frame = -1 / -3
Query: 1524 VVSTLSCPGGGSSSKFWTRRPMVMPRMGRARMIPGQLLRPTPKGRYLKSLPLASTCFXXX 1345
VVS LSCPGGGSSSKF TRRP VMP MG ARMIPGQL RPTPKG KSLP AST F
Sbjct: 378 VVSILSCPGGGSSSKFCTRRPSVMPMMGSARMIPGQLRRPTPKGTNRKSLPWASTDFSSS 199
Query: 1344 XXXXXXXXXXXXXXXXXLARYQALTRILLSAGMSXPPSLASWRFMCGTSSGMAIRSRSVS 1165
LAR QALTRIL SAGMS P SLAS RFMCGT SGMA+R RSVS
Sbjct: 198 RKRSGLNSSARTHRLGSLARNQALTRILDSAGMS*PASLASLRFMCGTRSGMAMRRRSVS 19
Score = 56.5 bits (117), Expect(2) = 2e-007
Identities = 21/32 (65%), Positives = 25/32 (78%)
Frame = -3 / -2
Query: 1255 GGDVVXAELGVVEVHVRHQQRDGHPQPQRLLD 1160
GGDVV ELG+ EVHVRHQ+R GH + +RL D
Sbjct: 109 GGDVVTGELGIAEVHVRHQERHGHAEAERLPD 14
Score = 22.1 bits (42), Expect(2) = 2e-007
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -3 / -2
Query: 1504 PGRRQQLEVL 1475
P RRQQLEVL
Sbjct: 358 PRRRQQLEVL 329
>gb|BF618363.2|BF618363 HVSMEc0005H12f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0005H12f, mRNA sequence
Length = 595
Score = 171 bits (369), Expect(2) = 3e-046
Identities = 79/111 (71%), Positives = 83/111 (74%)
Frame = -1 / -2
Query: 408 KMSKTTLRVREPNSTPCVWSTSRASGGDETTTRLRCPIRRRKTSPNLRDSAARLRWLRSS 229
KMS T LR R NSTPCV STS SGGD+T TRLR PIRRR TSPNLR AARLRW RSS
Sbjct: 447 KMSITRLRGRTRNSTPCVCSTSAPSGGDDTPTRLRWPIRRRNTSPNLRAIAARLRWFRSS 268
Query: 228 PTCSQFPKXXXXXXXXGSRSLRPRILDTAMATMTDAKRPTRSFSTKRRTMA 76
PTCSQFPK GS SLRPRILDT MA T A+RPTRSFSTK ++MA
Sbjct: 267 PTCSQFPKMGTGMGPGGSLSLRPRILDTTMAPTTAARRPTRSFSTKTKSMA 115
Score = 166 bits (357), Expect = 3e-040
Identities = 78/124 (62%), Positives = 85/124 (68%)
Frame = +2 / +2
Query: 122 ASVMVAIAVSKIRGRKLRLXXXXXXXXXFGNWLQVGDDLNHRNLAALSRKFGDVFLLRMG 301
A+V+ AI VSKIRGRKLRL FGNWLQVGDDLNHRNLAA++RKFG+VFLLRMG
Sbjct: 161 AAVVGAIVVSKIRGRKLRLPPGPIPVPIFGNWLQVGDDLNHRNLAAMARKFGEVFLLRMG 340
Query: 302 QRNLVVVSSPPLAREVLHTQGVEFGSRTRNVVFDIFTDKGQDMVFTVYGDHWRKMRRIMT 481
QRNLV VSSPPL EVLHTQGVEF R RN V DI + + WRKMR M
Sbjct: 341 QRNLVGVSSPPLGAEVLHTQGVEFRVRPRNRVIDILPGRARTWC*PCTATTWRKMRGKMD 520
Query: 482 VPFF 493
F
Sbjct: 521 RSLF 532
Score = 152 bits (326), Expect(2) = 2e-038
Identities = 70/117 (59%), Positives = 80/117 (68%)
Frame = -3 / -1
Query: 406 DVEDHVAGAGAELHALRVEHLPRQRRRRDHHQVALPHPEEEDVAELAGQRGEVAVVEVVA 227
+V VAG E HALRV+H +RR R HQVAL HPEEE +AELAG R +VAVV+VVA
Sbjct: 445 NVNHPVAGPDPEFHALRVQHFRAKRRGRHPHQVALAHPEEEHLAELAGHRRQVAVVQVVA 266
Query: 226 DLQPVPEDGHGDGAGRQPELAATDLXXXXXXXXXRQEADQELLHEEKDHGDGAEMEG 56
DLQPV EDGH DGA RQP+LAA DL R+EA QELLHE++ HG G G
Sbjct: 265 DLQPVSEDGHRDGARRQPQLAAPDLGHHDGAHHGREEAHQELLHEDEVHGAGRRGAG 95
Score = 50.1 bits (103), Expect(3) = 4e-011
Identities = 22/32 (68%), Positives = 22/32 (68%)
Frame = +1 / +1
Query: 61 PSPPRRHGPSLRGEAPGRPLGVRHGRHRGVQD 156
P RRHG LRGEAPG P R GRHRGVQD
Sbjct: 100 PLGGRRHGLRLRGEAPGGPPRGRGGRHRGVQD 195
Score = 35.9 bits (72), Expect(3) = 4e-011
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = +2 / +1
Query: 407 FTDKGQDMVFTVYGDH 454
FT +GQDMV TVYGDH
Sbjct: 445 FTREGQDMVLTVYGDH 492
Score = 35.0 bits (70), Expect(2) = 3e-046
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1 / -3
Query: 456 QWSPYTVNTMSCPLSVK 406
+WSPYTVNTMS P VK
Sbjct: 494 KWSPYTVNTMSWPSRVK 444
Score = 28.1 bits (55), Expect(2) = 2e-038
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = -3 / -2
Query: 463 LAPVVAVHGEHHVLPL 416
L VVAVHG HHVL L
Sbjct: 501 LRQVVAVHG*HHVLAL 454
Score = 24.9 bits (48), Expect(3) = 4e-011
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +3 / +3
Query: 162 AASSGCLPAPSPCP 203
AAS GC APS CP
Sbjct: 201 AAS*GCRRAPSRCP 242
>gb|BI959752.1|BI959752 HVSMEn0021E03f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0021E03f, mRNA sequence
Length = 691
Score = 185 bits (398), Expect = 8e-046
Identities = 79/115 (68%), Positives = 92/115 (80%)
Frame = +2 / +3
Query: 122 ASVMVAIAVSKIRGRKLRLXXXXXXXXXFGNWLQVGDDLNHRNLAALSRKFGDVFLLRMG 301
A+ ++AIAV+K+ G++ RL GNWLQVGDDLNHRNL L+++FG+ FLLRMG
Sbjct: 111 AAAVLAIAVAKLAGKRFRLPPGPSGAPIVGNWLQVGDDLNHRNLMGLAKRFGEGFLLRMG 290
Query: 302 QRNLVVVSSPPLAREVLHTQGVEFGSRTRNVVFDIFTDKGQDMVFTVYGDHWRKM 466
RNLVVVSSP LA+EVLHTQGVEF SRTRNVVFDI T KGQDMVFT YG+H RKM
Sbjct: 291 VRNLVVVSSPELAKEVLHTQGVEFXSRTRNVVFDILTGKGQDMVFTGYGNH*RKM 455
Score = 179 bits (386), Expect = 3e-044
Identities = 82/129 (63%), Positives = 89/129 (68%)
Frame = -1 / -1
Query: 465 ILRQWSPYTVNTMSCPLSVKMSKTTLRVREPNSTPCVWSTSRASGGDETTTRLRCPIRRR 286
ILRQW PY VNTMSCPL VKMSKTTLRVRE NSTP VW TS AS G ETTTRLR P+RRR
Sbjct: 454 ILRQWLPYPVNTMSCPLPVKMSKTTLRVREXNSTPWVWRTSLASSGLETTTRLRTPMRRR 275
Query: 285 KTSPNLRDSAARLRWLRSSPTCSQFPKXXXXXXXXGSRSLRPRILDTAMATMTDAKRPTR 106
SPN RLRWLRSSPTCSQ P G R P L TAMA+ AKRP+R
Sbjct: 274 NPSPNRLARPIRLRWLRSSPTCSQLPTMGAPEGPGGRRKRLPASLATAMASTAAAKRPSR 95
Query: 105 SFSTKRRTM 79
+FS +R ++
Sbjct: 94 AFSRRRTSI 68
Score = 142 bits (304), Expect = 7e-033
Identities = 75/143 (52%), Positives = 84/143 (58%)
Frame = -3 / -3
Query: 466 HLAPVVAVHGEHHVLPLVREDVEDHVAGAGAELHALRVEHLPRQRRRRDHHQVALPHPEE 287
HLA VVAV EHHVL L +DVED VAGAGAEL AL VE L + D HQVA H EE
Sbjct: 455 HLASVVAVPREHHVLSLAGQDVEDDVAGAGAELDALGVEDLLGELGAGDDHQVADAHAEE 276
Query: 286 EDVAELAGQRGEVAVVEVVADLQPVPEDGHGDGAGRQPELAATDLXXXXXXXXXRQEADQ 107
E +AE GQ +VAVVEVVADLQPV +DG GAG + E A +L +EA Q
Sbjct: 275 EPLAEPLGQAHQVAVVEVVADLQPVADDGGAGGAGWEAEALAGELGYGDGQHRRGEEAQQ 96
Query: 106 ELLHEEKDHGDGAEMEGGLACCP 38
LL EE H + G A P
Sbjct: 95 GLLQEEDVHRGVGAVCGSCAXVP 27
Score = 63.4 bits (132), Expect = 4e-009
Identities = 25/33 (75%), Positives = 26/33 (78%)
Frame = +1 / +2
Query: 370 VRLPHPQRGLRHLHGQGAGHGVHRVRRPLAQDA 468
V LPHPQR LRHL QG GHGVH VR+PL QDA
Sbjct: 359 VXLPHPQRRLRHLDRQGTGHGVHGVRQPLTQDA 457
Score = 33.6 bits (67), Expect = 3.5
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +1 / -2
Query: 61 PSPPRRHGPSLRGEAPGRPLGVRHG 135
P+PPRR GP+ GRP G R G
Sbjct: 126 PAPPRRRGPAGPSPGGGRPSGGRRG 52
>gb|AJ435273.1|AJ435273 AJ435273 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200083F08F1, mRNA sequence
Length = 538
Score = 179 bits (386), Expect = 3e-044
Identities = 71/81 (87%), Positives = 75/81 (92%)
Frame = -1 / -1
Query: 1596 *SVLGLHTMVECFKMWRLNWPPFSVVSTLSCPGGGSSSKFWTRRPMVMPRMGRARMIPGQ 1417
*+ LGL TMVECFKMWRLNWPPFSVVS+LS PGGG S+KFWTRRPMVMPRMG ARM+PGQ
Sbjct: 289 *NTLGLATMVECFKMWRLNWPPFSVVSSLSWPGGGESTKFWTRRPMVMPRMGSARMMPGQ 110
Query: 1416 LLRPTPKGRYLKSLPLASTCF 1354
L RPTPKGRYLKSLPLASTCF
Sbjct: 109 LRRPTPKGRYLKSLPLASTCF 47
Score = 149 bits (319), Expect = 6e-035
Identities = 63/95 (66%), Positives = 65/95 (68%)
Frame = +2 / +3
Query: 1355 KHVEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQDKVDTTEKG 1534
KHVEANGNDFRYLPFGVGRRSCP RLVQNF L PPPGQDK+DTTEKG
Sbjct: 48 KHVEANGNDFRYLPFGVGRRSCPGIILALPILGITIGRLVQNFVLSPPPGQDKLDTTEKG 227
Query: 1535 GQFSLHILKHSTIVCKPRTL*EQPTRRFHAEQSNV 1639
GQFSLHILKHSTIV KPR * R S +
Sbjct: 228 GQFSLHILKHSTIVAKPRVF*SSGVRALGVRASGI 332
Score = 59.3 bits (123), Expect(2) = 6e-010
Identities = 24/45 (53%), Positives = 26/45 (57%)
Frame = +1 / +2
Query: 1477 ELXXXXXXXXGQGXHHREGRPVQSPHLEAFHHRVQAKNALRAAHT 1611
EL GQ HH EGRPVQ PHLEA HHR QA++ L T
Sbjct: 170 ELRALAAARPGQARHHGEGRPVQPPHLEALHHRGQAQSVLEQRRT 304
Score = 52.8 bits (109), Expect = 6e-006
Identities = 18/26 (69%), Positives = 19/26 (73%)
Frame = -2 / -2
Query: 1583 ACTRWWNASRCGD*TGLPSRWCXPCP 1506
A RWW+ASRCG *TG PS WC CP
Sbjct: 276 AWPRWWSASRCGG*TGRPSPWCRACP 199
Score = 48.7 bits (100), Expect = 1e-004
Identities = 24/48 (50%), Positives = 29/48 (60%)
Frame = -3 / -3
Query: 1618 EPTCGLLLKRSWLAHDGGMLQDVETELASXXXXXXXXLPGRRQQLEVL 1475
E T L+ S L HDGG+LQDVE ELA+ L GRR++ EVL
Sbjct: 311 ESTYAAALEHSGLGHDGGVLQDVEAELAALLRGVELVLAGRRREHEVL 168
Score = 25.4 bits (49), Expect(2) = 6e-010
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +1 / +2
Query: 1387 VPALRRRPQEL 1419
VPALRRRP EL
Sbjct: 80 VPALRRRPPEL 112
>gb|BE216787.2|BE216787 HV_CEb0011J09f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0011J09f, mRNA sequence
Length = 891
Score = 174 bits (375), Expect = 1e-042
Identities = 80/115 (69%), Positives = 85/115 (73%)
Frame = -1 / -1
Query: 420 PLSVKMSKTTLRVREPNSTPCVWSTSRASGGDETTTRLRCPIRRRKTSPNLRDSAARLRW 241
P VKM T V +PNSTPCV STSRASGGD TTTRLR P+RRR TSPNLR AARLRW
Sbjct: 459 PPPVKMLNPTSWVWDPNSTPCVCSTSRASGGDATTTRLRWPMRRRNTSPNLRAIAARLRW 280
Query: 240 LRSSPTCSQFPKXXXXXXXXGSRSLRPRILDTAMATMTDAKRPTRSFSTKRRTMA 76
RSSPTCSQ PK GS SLRPRILDT MA T A+RPTRSFSTK ++MA
Sbjct: 279 FRSSPTCSQLPKMGTGMGPGGSLSLRPRILDTTMAPTTAARRPTRSFSTKTKSMA 115
Score = 174 bits (374), Expect = 2e-042
Identities = 77/122 (63%), Positives = 87/122 (71%)
Frame = -3 / -3
Query: 421 PLVREDVEDHVAGAGAELHALRVEHLPRQRRRRDHHQVALPHPEEEDVAELAGQRGEVAV 242
P +D + HV G G ELHALRV+HLPRQRR R HHQVAL H EEE +AELAG R +VAV
Sbjct: 460 PSPGQDAQPHVLGLGPELHALRVQHLPRQRRGRHHHQVALAHAEEEHLAELAGHRRQVAV 281
Query: 241 VEVVADLQPVPEDGHGDGAGRQPELAATDLXXXXXXXXXRQEADQELLHEEKDHGDGAEM 62
V+VVADLQPV EDGH DGA RQP+LAA DL R+EA QELLHE++ HG G
Sbjct: 280 VQVVADLQPVTEDGHRDGARRQPQLAAPDLGHHDGAHHGREEAHQELLHEDEVHGAGRRG 101
Query: 61 EG 56
G
Sbjct: 100 NG 95
Score = 168 bits (361), Expect = 1e-040
Identities = 74/100 (74%), Positives = 83/100 (83%)
Frame = +2 / +2
Query: 122 ASVMVAIAVSKIRGRKLRLXXXXXXXXXFGNWLQVGDDLNHRNLAALSRKFGDVFLLRMG 301
A+V+ AI VSKIRGRKLRL FGNWLQVGDDLNHRNLAA++RKFG+VFLLRMG
Sbjct: 161 AAVVGAIVVSKIRGRKLRLPPGPIPVPIFGNWLQVGDDLNHRNLAAMARKFGEVFLLRMG 340
Query: 302 QRNLVVVSSPPLAREVLHTQGVEFGSRTRNVVFDIFTDKG 421
QRNLVVV+SPPLAREVLHTQGVEFGS+T++V I T G
Sbjct: 341 QRNLVVVASPPLAREVLHTQGVEFGSQTQDVGLSILTGGG 460
Score = 49.6 bits (102), Expect(2) = 5e-007
Identities = 21/28 (75%), Positives = 21/28 (75%)
Frame = +1 / +1
Query: 73 RRHGPSLRGEAPGRPLGVRHGRHRGVQD 156
RRHG LRGEAPG P R GRHRGVQD
Sbjct: 112 RRHGLRLRGEAPGGPPRGRGGRHRGVQD 195
Score = 24.9 bits (48), Expect(2) = 5e-007
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +3 / +3
Query: 162 AASSGCLPAPSPCP 203
AAS GC APS CP
Sbjct: 201 AAS*GCRRAPSRCP 242
>gb|AU252323.1|AU252323 AU252323 salt-stressed barley root cDNA Hordeum vulgare subsp.
vulgare cDNA clone BR-C15 similar to trans-cinnamic acid
hydroxylase, mRNA sequence
Length = 484
Score = 174 bits (374), Expect = 2e-042
Identities = 69/81 (85%), Positives = 73/81 (90%)
Frame = -1 / +2
Query: 1596 *SVLGLHTMVECFKMWRLNWPPFSVVSTLSCPGGGSSSKFWTRRPMVMPRMGRARMIPGQ 1417
*+ LGL TMVECFKMWRLNWPPFSVVS+LS PGGG S+KFWTRRPMVMPRMG ARM+PGQ
Sbjct: 173 *NTLGLATMVECFKMWRLNWPPFSVVSSLSWPGGGXSTKFWTRRPMVMPRMGSARMMPGQ 352
Query: 1416 LLRPTPKGRYLKSLPLASTCF 1354
L RPTPKGRYLKS LASTCF
Sbjct: 353 LRRPTPKGRYLKSFALASTCF 415
Score = 146 bits (314), Expect = 3e-034
Identities = 62/95 (65%), Positives = 64/95 (67%)
Frame = +2 / -2
Query: 1355 KHVEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQDKVDTTEKG 1534
KHVEAN NDFRYLPFGVGRRSCP RLVQNF L PPPGQDK+DTTEKG
Sbjct: 414 KHVEANANDFRYLPFGVGRRSCPGIILALPILGITIGRLVQNFVLXPPPGQDKLDTTEKG 235
Query: 1535 GQFSLHILKHSTIVCKPRTL*EQPTRRFHAEQSNV 1639
GQFSLHILKHSTIV KPR * R S +
Sbjct: 234 GQFSLHILKHSTIVAKPRVF*SSGVRALGVRASGI 130
Score = 59.3 bits (123), Expect(2) = 6e-010
Identities = 24/45 (53%), Positives = 26/45 (57%)
Frame = +1 / -1
Query: 1477 ELXXXXXXXXGQGXHHREGRPVQSPHLEAFHHRVQAKNALRAAHT 1611
EL GQ HH EGRPVQ PHLEA HHR QA++ L T
Sbjct: 292 ELRALAAARPGQARHHGEGRPVQPPHLEALHHRGQAQSVLEQRRT 158
Score = 52.8 bits (109), Expect = 6e-006
Identities = 18/26 (69%), Positives = 19/26 (73%)
Frame = -2 / +3
Query: 1583 ACTRWWNASRCGD*TGLPSRWCXPCP 1506
A RWW+ASRCG *TG PS WC CP
Sbjct: 186 AWPRWWSASRCGG*TGRPSPWCRACP 263
Score = 47.8 bits (98), Expect = 2e-004
Identities = 24/48 (50%), Positives = 28/48 (58%)
Frame = -3 / +1
Query: 1618 EPTCGLLLKRSWLAHDGGMLQDVETELASXXXXXXXXLPGRRQQLEVL 1475
E T L+ S L HDGG+LQDVE ELA+ L GRR + EVL
Sbjct: 151 ESTYAAALEHSGLGHDGGVLQDVEAELAALLRGVELVLAGRRXEHEVL 294
Score = 25.4 bits (49), Expect(2) = 6e-010
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +1 / -1
Query: 1387 VPALRRRPQEL 1419
VPALRRRP EL
Sbjct: 382 VPALRRRPPEL 350
>gb|BM370693.2|BM370693 EBro04_SQ001_N15_R root, 3 week, salt-stressed, cv Optic, EBro04
Hordeum vulgare subsp. vulgare cDNA clone
EBro04_SQ001_N15 5', mRNA sequence
Length = 386
Score = 161 bits (347), Expect = 8e-039
Identities = 68/97 (70%), Positives = 80/97 (82%)
Frame = +2 / +1
Query: 122 ASVMVAIAVSKIRGRKLRLXXXXXXXXXFGNWLQVGDDLNHRNLAALSRKFGDVFLLRMG 301
A+ ++AIAV+K+ G++ RL GNWLQVGDDLNHRNL L+++FG+VFLLRMG
Sbjct: 94 AAAVLAIAVAKLAGKRFRLPPGPSGAPIVGNWLQVGDDLNHRNLMGLAKRFGEVFLLRMG 273
Query: 302 QRNLVVVSSPPLAREVLHTQGVEFGSRTRNVVFDIFT 412
RNLVVVSSP LA+EVLHTQGVEFGSRTRNVVFDIFT
Sbjct: 274 VRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVFDIFT 384
Score = 148 bits (318), Expect = 8e-035
Identities = 69/111 (62%), Positives = 76/111 (68%)
Frame = -1 / -1
Query: 411 VKMSKTTLRVREPNSTPCVWSTSRASGGDETTTRLRCPIRRRKTSPNLRDSAARLRWLRS 232
VKMSKTTLRVREPNSTP VW TS AS G ETTTRLR P+RRR TSPN RLRWLRS
Sbjct: 383 VKMSKTTLRVREPNSTPWVWRTSLASSGLETTTRLRTPMRRRNTSPNRLARPIRLRWLRS 204
Query: 231 SPTCSQFPKXXXXXXXXGSRSLRPRILDTAMATMTDAKRPTRSFSTKRRTM 79
SPTCSQ P G R P L TAMA+ AKRP+R+FS +R ++
Sbjct: 203 SPTCSQLPTMGAPEGPGGRRKRLPASLATAMASTAAAKRPSRAFSRRRTSI 51
Score = 119 bits (255), Expect = 4e-026
Identities = 63/122 (51%), Positives = 71/122 (58%)
Frame = -3 / -3
Query: 409 EDVEDHVAGAGAELHALRVEHLPRQRRRRDHHQVALPHPEEEDVAELAGQRGEVAVVEVV 230
EDVED VAGAGAEL AL VE L + D HQVA H EEE +AE GQ +VAVVEVV
Sbjct: 381 EDVEDDVAGAGAELDALGVEDLLGELGAGDDHQVADAHAEEEHLAEPLGQAHQVAVVEVV 202
Query: 229 ADLQPVPEDGHGDGAGRQPELAATDLXXXXXXXXXRQEADQELLHEEKDHGDGAEMEGGL 50
ADLQPV +DG GAG + E A +L +EA Q LL EE H + G
Sbjct: 201 ADLQPVADDGGAGGAGWEAEALAGELGYGDGQHRRGEEAQQGLLQEEDVHRGVGAVCGSC 22
Query: 49 AC 44
AC
Sbjct: 21 AC 16
Score = 35.9 bits (72), Expect = 0.71
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = +1 / +3
Query: 370 VRLPHPQRGLRHLH 411
VRLPHPQR LRHLH
Sbjct: 342 VRLPHPQRRLRHLH 383
Score = 33.6 bits (67), Expect = 3.5
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +1 / -2
Query: 61 PSPPRRHGPSLRGEAPGRPLGVRHG 135
P+PPRR GP+ GRP G R G
Sbjct: 109 PAPPRRRGPAGPSPGGGRPSGGRRG 35
>gb|BQ665478.1|BQ665478 HX03M12u HX Hordeum vulgare subsp. vulgare cDNA clone HX03M12
3-PRIME, mRNA sequence
Length = 538
Score = 160 bits (345), Expect = 2e-038
Identities = 67/109 (61%), Positives = 74/109 (67%)
Frame = +2 / -2
Query: 1259 SKILVNAWYLANNPDSWXXXXXXXXXXXXXXXKHVEANGNDFRYLPFGVGRRSCPXXXXX 1438
SKILVNAW+LAN+P W K VEA+GNDFR++PFGVGRRSCP
Sbjct: 537 SKILVNAWFLANDPKRWVRADEFRPERFLEEEKSVEAHGNDFRFVPFGVGRRSCPGIILA 358
Query: 1439 XXXXXXXXXRLVQNFELLPPPGQDKVDTTEKGGQFSLHILKHSTIVCKP 1585
RLVQNFELLPPPGQDK+DTTEK GQFS ILKH+TIVCKP
Sbjct: 357 LPIIGITLGRLVQNFELLPPPGQDKIDTTEKPGQFSNQILKHATIVCKP 211
Score = 147 bits (315), Expect = 2e-034
Identities = 68/108 (62%), Positives = 70/108 (64%)
Frame = -1 / +2
Query: 1584 GLHTMVECFKMWRLNWPPFSVVSTLSCPGGGSSSKFWTRRPMVMPRMGRARMIPGQLLRP 1405
GL TMV C ++W LN P FSVVS LSCPGGGSSSKF TRRP VMP MG ARMIPGQL RP
Sbjct: 212 GLQTMVACLRIWLLNCPGFSVVSILSCPGGGSSSKFCTRRPSVMPMMGSARMIPGQLRRP 391
Query: 1404 TPKGRYLKSLPLASTCFXXXXXXXXXXXXXXXXXXXXLARYQALTRIL 1261
TPKG KSLP AST F LAR QALTRIL
Sbjct: 392 TPKGTNRKSLPWASTDFSSSRKRSGLNSSARTHRLGSLARNQALTRIL 535
Score = 46.9 bits (96), Expect = 3e-004
Identities = 17/32 (53%), Positives = 20/32 (62%)
Frame = -2 / +3
Query: 1601 ALKAFLACTRWWNASRCGD*TGLPSRWCXPCP 1506
++K +AC RWW A G *T L SRWC CP
Sbjct: 195 SIKPRVACRRWWRA*GSGC*TALASRWCRSCP 290
Score = 46.4 bits (95), Expect = 5e-004
Identities = 19/40 (47%), Positives = 21/40 (52%)
Frame = +1 / -1
Query: 1477 ELXXXXXXXXGQGXHHREGRPVQSPHLEAFHHRVQAKNAL 1596
EL GQ HHRE R VQ P +A HHR+QA L
Sbjct: 319 ELRAAAAAGAGQDRHHREARAVQQPDPQARHHRLQATRGL 200
Score = 42.3 bits (86), Expect = 0.008
Identities = 20/37 (54%), Positives = 23/37 (62%)
Frame = -3 / +1
Query: 1585 WLAHDGGMLQDVETELASXXXXXXXXLPGRRQQLEVL 1475
WLA DGG+L+D+ EL LP RRQQLEVL
Sbjct: 211 WLADDGGVLEDLVAELPWLLGGVDLVLPRRRQQLEVL 321
>gb|BG415142.2|BG415142 HVSMEk0005E23f Hordeum vulgare testa/pericarp EST library HVcDNA0013
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEk0005E23f, mRNA sequence
Length = 922
Score = 141 bits (303), Expect(2) = 4e-038
Identities = 54/132 (40%), Positives = 88/132 (66%)
Frame = +2 / +3
Query: 914 IDHILEAQQKGEINEDNVLFIVENINVAAIETTLWSIEWAVAELVNHPEIQQKLRQELDT 1093
+D + ++K ++++D V ++ ++ A ++TT+ S+EWA+AELV +P +QQKL++ELD
Sbjct: 9 VDALFTLREKYDLSDDTVFGLLWDMITAGMDTTVISVEWAMAELVRNPRVQQKLQEELDN 188
Query: 1094 VLGPGHQITEPDTHNLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILV 1273
V+G + E D NLPYL V+KE+LRL PL++PH K+GGY+IP + ++V
Sbjct: 189 VVGRDRVMAETDFQNLPYLMDVVKESLRLHPPTPLMLPHKASASVKVGGYNIPKGANVMV 368
Query: 1274 NAWYLANNPDSW 1309
N W +A +P W
Sbjct: 369 NVWAVARDPKVW 404
Score = 80.3 bits (169), Expect(2) = 3e-019
Identities = 49/117 (41%), Positives = 61/117 (52%)
Frame = -1 / -1
Query: 1290 ARYQALTRILLSAGMSXPPSLASWRFMCGTSSGMAIRSRSVSLITACR*GRLCVSGSVIW 1111
A T L GM PP+L + G+ SG+ R SL T+ R GR S S +
Sbjct: 385 ATAHTFTMTLAPLGML*PPTLTLALALWGSMSGVGGCRRRDSLTTSIRYGRFWKSVSAMT 206
Query: 1110 WPGPSTVSSSCRSFCWISGWFTSSATAHSIDHSVVSIAATLMFSTMKSTLSSLISPF 940
P+T+SSS SFC G+ TSSA AHS D +VVSI A +M T+SSL S F
Sbjct: 205 RSRPTTLSSSSCSFCCTLGFLTSSAMAHSTDMTVVSIPAVIMSHRSPKTVSSLRSYF 35
Score = 37.7 bits (76), Expect(2) = 4e-038
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +2 / +3
Query: 1361 VEANGNDFRYLPFGVGRRSCP 1423
++ G DFR LPFG GRR CP
Sbjct: 450 IDIKGIDFRVLPFGAGRRVCP 512
Score = 35.9 bits (72), Expect(2) = 3e-019
Identities = 14/21 (66%), Positives = 15/21 (71%)
Frame = -1 / -1
Query: 1425 PGQLLRPTPKGRYLKSLPLAS 1363
PG LRP PKG LKS+PL S
Sbjct: 514 PGHTLRPAPKGSTLKSMPLMS 452
>gb|BQ458589.1|BQ458589 HA04M20r HA Hordeum vulgare subsp. vulgare cDNA clone HA04M20
5-PRIME, mRNA sequence
Length = 630
Score = 99.1 bits (210), Expect(2) = 8e-038
Identities = 38/69 (55%), Positives = 47/69 (68%)
Frame = +2 / +2
Query: 1379 DFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQDKVDTTEKGGQFSLHIL 1558
DFR+LPFGVGRRSCP +LV++FE++PPPG DK+D +EKGGQFSLHI
Sbjct: 209 DFRFLPFGVGRRSCPGIILALPILALIVGKLVRSFEMVPPPGVDKLDVSEKGGQFSLHIA 388
Query: 1559 KHSTIVCKP 1585
HS + P
Sbjct: 389 NHSLVAFHP 415
Score = 93.6 bits (198), Expect(2) = 2e-025
Identities = 40/70 (57%), Positives = 47/70 (67%)
Frame = -1 / -1
Query: 1587 LGLHTMVECFKMWRLNWPPFSVVSTLSCPGGGSSSKFWTRRPMVMPRMGRARMIPGQLLR 1408
+G + E MWRLN PPFS+ S+LS PGGG+ SK T P + RMG ARM+PGQL R
Sbjct: 417 MGWNATREWLAMWRLNCPPFSLTSSLSTPGGGTISKLLTSFPTMSARMGSARMMPGQLRR 238
Query: 1407 PTPKGRYLKS 1378
PTP GR KS
Sbjct: 237 PTPNGRNRKS 208
Score = 79.4 bits (167), Expect(2) = 8e-038
Identities = 29/40 (72%), Positives = 34/40 (85%)
Frame = +2 / +2
Query: 1190 IPLLVPHMNLHDAKLGGYDIPAESKILVNAWYLANNPDSW 1309
IPLLVPHMNL +A LGGY IP SK++VNAW+LANNP+ W
Sbjct: 11 IPLLVPHMNLEEASLGGYTIPEGSKVVVNAWWLANNPELW 130
Score = 43.2 bits (88), Expect(2) = 2e-025
Identities = 21/34 (61%), Positives = 23/34 (67%)
Frame = -1 / -1
Query: 1290 ARYQALTRILLSAGMSXPPSLASWRFMCGTSSGM 1189
A +QALT L +GM PP LAS RFM GT SGM
Sbjct: 111 ASHQALTTTLEPSGMV*PPRLASSRFMWGTRSGM 10
>gb|BM370681.2|BM370681 EBro04_SQ001_M14_R root, 3 week, salt-stressed, cv Optic, EBro04
Hordeum vulgare subsp. vulgare cDNA clone
EBro04_SQ001_M14 5', mRNA sequence
Length = 377
Score = 155 bits (332), Expect = 1e-036
Identities = 65/94 (69%), Positives = 77/94 (81%)
Frame = +2 / +1
Query: 122 ASVMVAIAVSKIRGRKLRLXXXXXXXXXFGNWLQVGDDLNHRNLAALSRKFGDVFLLRMG 301
A+ ++AIAV+K+ G++ RL GNWLQVGDDLNHRNL L+++FG+VFLLRMG
Sbjct: 94 AAAVLAIAVAKLAGKRFRLPPGPSGAPIVGNWLQVGDDLNHRNLMGLAKRFGEVFLLRMG 273
Query: 302 QRNLVVVSSPPLAREVLHTQGVEFGSRTRNVVFD 403
RNLVVVSSP LA+EVLHTQGVEFGSRTRNVVFD
Sbjct: 274 VRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVFD 375
Score = 144 bits (309), Expect = 1e-033
Identities = 67/109 (61%), Positives = 74/109 (67%)
Frame = -1 / -1
Query: 405 MSKTTLRVREPNSTPCVWSTSRASGGDETTTRLRCPIRRRKTSPNLRDSAARLRWLRSSP 226
MSKTTLRVREPNSTP VW TS AS G ETTTRLR P+RRR TSPN RLRWLRSSP
Sbjct: 377 MSKTTLRVREPNSTPWVWRTSLASSGLETTTRLRTPMRRRNTSPNRLARPIRLRWLRSSP 198
Query: 225 TCSQFPKXXXXXXXXGSRSLRPRILDTAMATMTDAKRPTRSFSTKRRTM 79
TCSQ P G R P L TAMA+ AKRP+R+FS +R ++
Sbjct: 197 TCSQLPTMGAPEGPGGRRKRLPASLATAMASTAAAKRPSRAFSRRRTSI 51
Score = 114 bits (244), Expect = 1e-024
Identities = 61/120 (50%), Positives = 69/120 (57%)
Frame = -3 / -3
Query: 403 VEDHVAGAGAELHALRVEHLPRQRRRRDHHQVALPHPEEEDVAELAGQRGEVAVVEVVAD 224
VED VAGAGAEL AL VE L + D HQVA H EEE +AE GQ +VAVVEVVAD
Sbjct: 375 VEDDVAGAGAELDALGVEDLLGELGAGDDHQVADAHAEEEHLAEPLGQAHQVAVVEVVAD 196
Query: 223 LQPVPEDGHGDGAGRQPELAATDLXXXXXXXXXRQEADQELLHEEKDHGDGAEMEGGLAC 44
LQPV +DG GAG + E A +L +EA Q LL EE H + G AC
Sbjct: 195 LQPVADDGGAGGAGWEAEALAGELGYGDGQHRRGEEAQQGLLQEEDVHRGVGAVCGSCAC 16
Score = 33.6 bits (67), Expect = 3.5
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +1 / -2
Query: 61 PSPPRRHGPSLRGEAPGRPLGVRHG 135
P+PPRR GP+ GRP G R G
Sbjct: 109 PAPPRRRGPAGPSPGGGRPSGGRRG 35
>gb|BU973663.1|BU973663 HB25J24r BC Hordeum vulgare subsp. vulgare cDNA clone HB25J24
5-PRIME, mRNA sequence
Length = 485
Score = 148 bits (318), Expect = 8e-035
Identities = 58/68 (85%), Positives = 62/68 (91%)
Frame = -1 / -1
Query: 1596 *SVLGLHTMVECFKMWRLNWPPFSVVSTLSCPGGGSSSKFWTRRPMVMPRMGRARMIPGQ 1417
*+ LGL TMVECFKMWRLNWPPFSVVS+LS PGGG S+KFWTRRPMVMPRMG ARM+PGQ
Sbjct: 215 *NTLGLATMVECFKMWRLNWPPFSVVSSLSWPGGGESTKFWTRRPMVMPRMGSARMMPGQ 36
Query: 1416 LLRPTPKG 1393
L RPTPKG
Sbjct: 35 LRRPTPKG 12
Score = 116 bits (248), Expect = 4e-025
Identities = 50/83 (60%), Positives = 53/83 (63%)
Frame = +2 / +1
Query: 1391 LPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQDKVDTTEKGGQFSLHILKHST 1570
+PFGVGRRSCP RLVQNF L PPPGQDK+DTTEKGGQFSLHILKHST
Sbjct: 10 VPFGVGRRSCPGIILALPILGITIGRLVQNFVLSPPPGQDKLDTTEKGGQFSLHILKHST 189
Query: 1571 IVCKPRTL*EQPTRRFHAEQSNV 1639
IV KPR * R S +
Sbjct: 190 IVAKPRVF*SSGVRALGVRASGI 258
Score = 59.3 bits (123), Expect = 7e-008
Identities = 24/45 (53%), Positives = 26/45 (57%)
Frame = +1 / +3
Query: 1477 ELXXXXXXXXGQGXHHREGRPVQSPHLEAFHHRVQAKNALRAAHT 1611
EL GQ HH EGRPVQ PHLEA HHR QA++ L T
Sbjct: 96 ELRALAAARPGQARHHGEGRPVQPPHLEALHHRGQAQSVLEQRRT 230
Score = 52.8 bits (109), Expect = 6e-006
Identities = 18/26 (69%), Positives = 19/26 (73%)
Frame = -2 / -2
Query: 1583 ACTRWWNASRCGD*TGLPSRWCXPCP 1506
A RWW+ASRCG *TG PS WC CP
Sbjct: 202 AWPRWWSASRCGG*TGRPSPWCRACP 125
Score = 48.7 bits (100), Expect = 1e-004
Identities = 24/48 (50%), Positives = 29/48 (60%)
Frame = -3 / -3
Query: 1618 EPTCGLLLKRSWLAHDGGMLQDVETELASXXXXXXXXLPGRRQQLEVL 1475
E T L+ S L HDGG+LQDVE ELA+ L GRR++ EVL
Sbjct: 237 ESTYAAALEHSGLGHDGGVLQDVEAELAALLRGVELVLAGRRREHEVL 94
>gb|BF253422.2|BF253422 HVSMEf0001G02f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEf0001G02f, mRNA sequence
Length = 617
Score = 145 bits (311), Expect(2) = 8e-035
Identities = 55/132 (41%), Positives = 90/132 (68%)
Frame = +2 / +1
Query: 914 IDHILEAQQKGEINEDNVLFIVENINVAAIETTLWSIEWAVAELVNHPEIQQKLRQELDT 1093
+D + ++K ++++D V ++ ++ A ++TT+ S+EWA+AELV +P +QQKL++ELD
Sbjct: 130 VDALFTLREKYDLSDDTVFGLLWDMITAGMDTTVISVEWAMAELVRNPRVQQKLQEELDN 309
Query: 1094 VLGPGHQITEPDTHNLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILV 1273
V+G + E D NLPYL AV+KE+LRL PL++PH K+GGY+IP + ++V
Sbjct: 310 VVGRDRVMAETDFQNLPYLMAVVKESLRLHPPTPLMLPHKASASVKVGGYNIPKGANVMV 489
Query: 1274 NAWYLANNPDSW 1309
N W +A +P+ W
Sbjct: 490 NVWAVARDPNVW 525
Score = 81.7 bits (172), Expect(2) = 7e-016
Identities = 50/117 (42%), Positives = 61/117 (52%)
Frame = -1 / -1
Query: 1290 ARYQALTRILLSAGMSXPPSLASWRFMCGTSSGMAIRSRSVSLITACR*GRLCVSGSVIW 1111
A T L GM PP+L + G+ SG+ R SL TA R GR S S +
Sbjct: 506 ATAHTFTMTLAPLGML*PPTLTLALALWGSMSGVGGCRRRDSLTTAIRYGRFWKSVSAMT 327
Query: 1110 WPGPSTVSSSCRSFCWISGWFTSSATAHSIDHSVVSIAATLMFSTMKSTLSSLISPF 940
P+T+SSS SFC G+ TSSA AHS D +VVSI A +M T+SSL S F
Sbjct: 326 RSRPTTLSSSSCSFCCTLGFLTSSAMAHSTDMTVVSIPAVIMSHRSPKTVSSLRSYF 156
Score = 23.1 bits (44), Expect(2) = 8e-035
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +2 / +1
Query: 1361 VEANGNDFRYLPF 1399
++ G+DFR LPF
Sbjct: 571 IDIKGSDFRVLPF 609
Score = 23.1 bits (44), Expect(2) = 7e-016
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -1 / -1
Query: 1407 PTPKGRYLKSLPLAS 1363
P KG LKSLPL S
Sbjct: 617 PAXKGSTLKSLPLMS 573
>gb|BQ762245.1|BQ762245 EBro01_SQ005_B10_R root, 3 week, hydroponic grown, no treatment, cv
Optic, EBro01 Hordeum vulgare subsp. vulgare cDNA clone
EBro01_SQ005_B10 5', mRNA sequence
Length = 537
Score = 146 bits (313), Expect = 4e-034
Identities = 60/108 (55%), Positives = 70/108 (64%)
Frame = +2 / +1
Query: 1262 KILVNAWYLANNPDSWXXXXXXXXXXXXXXXKHVEANGNDFRYLPFGVGRRSCPXXXXXX 1441
KILVNAW+LAN+P W + VEANGNDFR++PFGVGRRSCP
Sbjct: 1 KILVNAWFLANDPKRWVRADEFRPERFLEEERAVEANGNDFRFVPFGVGRRSCPGIILAL 180
Query: 1442 XXXXXXXXRLVQNFELLPPPGQDKVDTTEKGGQFSLHILKHSTIVCKP 1585
RLVQNF+LLPP G+DK+DTTEK GQFS I H+T+VCKP
Sbjct: 181 PIIGITLGRLVQNFQLLPPLGKDKIDTTEKPGQFSNQIRNHATVVCKP 324
Score = 133 bits (286), Expect = 2e-030
Identities = 65/111 (58%), Positives = 69/111 (62%)
Frame = -1 / -2
Query: 1596 *SVLGLHTMVECFKMWRLNWPPFSVVSTLSCPGGGSSSKFWTRRPMVMPRMGRARMIPGQ 1417
*++ GL T V ++W LN P FSVVS LS P GGSS KF TRRP VMP MGRARMIPGQ
Sbjct: 335 *ALSGLQTTVAWLRIWLLNCPGFSVVSILSFPSGGSSWKFCTRRPSVMPMMGRARMIPGQ 156
Query: 1416 LLRPTPKGRYLKSLPLASTCFXXXXXXXXXXXXXXXXXXXXLARYQALTRI 1264
LLRPTPKG KSLPLAST LAR QALTRI
Sbjct: 155 LLRPTPKGTNRKSLPLASTALSSSRNRSGRNSSARTQRLGSLARNQALTRI 3
Score = 40.9 bits (83), Expect = 0.021
Identities = 20/43 (46%), Positives = 25/43 (58%)
Frame = -3 / -1
Query: 1603 LLLKRSWLAHDGGMLQDVETELASXXXXXXXXLPGRRQQLEVL 1475
+LL WLA DGG++ D+ EL+ LP RRQ LEVL
Sbjct: 342 VLLSLEWLADDGGVVADLVAELSGLFRGINLVLPQRRQ*LEVL 214
>gb|BI776301.2|BI776301 EBem04_SQ001_H10_R embryo, 12 DPA, no treatment, cv Optic, EBem04
Hordeum vulgare subsp. vulgare cDNA clone
EBem04_SQ001_H10 5', mRNA sequence
Length = 537
Score = 144 bits (309), Expect = 1e-033
Identities = 55/132 (41%), Positives = 89/132 (67%)
Frame = +2 / +1
Query: 914 IDHILEAQQKGEINEDNVLFIVENINVAAIETTLWSIEWAVAELVNHPEIQQKLRQELDT 1093
+D + ++K ++++D V ++ ++ A ++TT+ S+EWA+AELV +P +QQKL++ELD
Sbjct: 73 VDALFTLREKYDLSDDTVFGLLWDMITAGMDTTVISVEWAMAELVRNPRVQQKLQEELDN 252
Query: 1094 VLGPGHQITEPDTHNLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILV 1273
V+G + E D NLPYL AV+KE+LRL PL++PH K+GGY+IP + ++V
Sbjct: 253 VVGRDRVMAETDFQNLPYLMAVVKESLRLHPPTPLMLPHKASASVKVGGYNIPKGANVMV 432
Query: 1274 NAWYLANNPDSW 1309
N W +A +P W
Sbjct: 433 NVWAVARDPKVW 468
Score = 81.7 bits (172), Expect = 1e-014
Identities = 50/117 (42%), Positives = 61/117 (52%)
Frame = -1 / -2
Query: 1290 ARYQALTRILLSAGMSXPPSLASWRFMCGTSSGMAIRSRSVSLITACR*GRLCVSGSVIW 1111
A T L GM PP+L + G+ SG+ R SL TA R GR S S +
Sbjct: 449 ATAHTFTMTLAPLGML*PPTLTLALALWGSMSGVGGCRRRDSLTTAIRYGRFWKSVSAMT 270
Query: 1110 WPGPSTVSSSCRSFCWISGWFTSSATAHSIDHSVVSIAATLMFSTMKSTLSSLISPF 940
P+T+SSS SFC G+ TSSA AHS D +VVSI A +M T+SSL S F
Sbjct: 269 RSRPTTLSSSSCSFCCTLGFLTSSAMAHSTDMTVVSIPAVIMSHRSPKTVSSLRSYF 99
>emb|AJ234782.1|HVU234782 Hordeum vulgare genomic DNA fragment; clone MWG2112.rev
Length = 358
Score = 140 bits (300), Expect = 3e-032
Identities = 54/83 (65%), Positives = 71/83 (85%)
Frame = +2 / +1
Query: 617 LMMYNNVYRIMFDRRFESMDDPLFLRLRALNGERSRLAQSFEYNYGDFIPILRPFLRGYL 796
LMMYN+++RIMFDRRFE++ DPLF +L+ALN ERS L+QSF+YNYGDFIP+LRPFLR YL
Sbjct: 1 LMMYNDMFRIMFDRRFETVADPLFNQLKALNAERSILSQSFDYNYGDFIPVLRPFLRRYL 180
Query: 797 RVCKEVKETRLKLFKDFFLEERK 865
C +K R+K+F+D F+++RK
Sbjct: 181 NRCTNLKTKRMKVFEDHFVQQRK 249
Score = 43.2 bits (88), Expect(2) = 2e-004
Identities = 23/47 (48%), Positives = 26/47 (55%)
Frame = -1 / -3
Query: 759 KSP*LYSKLCXXXXXXXXXXXXXRKSGSSMLSKRRSNMIRYTLLYIM 619
KSP*L SKL KSGS+ +S RRSNM+R LYIM
Sbjct: 143 KSP*L*SKLWERMLRSALSALSWLKSGSATVSNRRSNMMRNMSLYIM 3
Score = 35.0 bits (70), Expect = 1.3
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = -3 / -2
Query: 673 HALEAPVEHDPVYVVVHHE 617
H LE VEHD +VVVHHE
Sbjct: 57 HGLEPAVEHDAEHVVVHHE 1
Score = 32.2 bits (64), Expect = 9.0
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +1 / +3
Query: 619 HDVQQRIPDHVRPALRE 669
HDVQ+ +P HVRP +R+
Sbjct: 3 HDVQRHVPHHVRPPVRD 53
Score = 22.6 bits (43), Expect(2) = 2e-004
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -3 / -2
Query: 793 VAAEERTEDGD 761
VAAEE EDGD
Sbjct: 177 VAAEEGAEDGD 145
>gb|AY989887.1| Hordeum vulgare subsp. vulgare cytochrome P450 monooxygenase
CYP71U4v2 mRNA, complete cds
Length = 1578
Score = 83.5 bits (176), Expect(5) = 1e-031
Identities = 34/91 (37%), Positives = 54/91 (59%)
Frame = +2 / +1
Query: 242 HRNLAALSRKFGDVFLLRMGQRNLVVVSSPPLAREVLHTQGVEFGSRTRNVVFDIFTDKG 421
HR L +LSR++G V LLR+G+ V+VS+P A VL T + F +RT D+
Sbjct: 169 HRALLSLSRRYGPVMLLRLGEVPNVIVSTPEAAMLVLKTNDLTFATRTSGPTLDVVGSAS 348
Query: 422 QDMVFTVYGDHWRKMRRIMTVPFFTNKVVQQ 514
+ ++F YG+HWR+MR++ V + V++
Sbjct: 349 EGIIFAPYGEHWRQMRKVCVVELLSAMQVRR 441
Score = 42.8 bits (87), Expect(3) = 1e-006
Identities = 21/53 (39%), Positives = 28/53 (52%)
Frame = -3 / -1
Query: 493 EEGHGHDAAHLAPVVAVHGEHHVLPLVREDVEDHVAGAGAELHALRVEHLPRQ 335
E+ H D AHL PV+AV E L +DV+ AG G E + +EH R+
Sbjct: 420 EQLHDADLAHLPPVLAVGREDDALAGAADDVQRGAAGTGGEGEVVGLEHQHRR 262
Score = 36.8 bits (74), Expect(5) = 1e-031
Identities = 15/42 (35%), Positives = 27/42 (64%)
Frame = +2 / +1
Query: 974 IVENINVAAIETTLWSIEWAVAELVNHPEIQQKLRQELDTVL 1099
++ +I AA +TT ++EWA+AELV +P + + E+ +L
Sbjct: 916 VIFDIFSAATDTTAATLEWAMAELVRNPRAMARAKLEVRQML 1041
Score = 35.4 bits (71), Expect(5) = 1e-031
Identities = 16/29 (55%), Positives = 19/29 (65%)
Frame = +2 / +1
Query: 1115 ITEPDTHNLPYLQAVIKETLRLRMAIPLL 1201
IT D L YL+ VIKETLRL + PL+
Sbjct: 1063 ITSADLAGLHYLRMVIKETLRLHPSAPLI 1149
Score = 35.0 bits (70), Expect(5) = 1e-031
Identities = 13/47 (27%), Positives = 20/47 (42%)
Frame = +2 / +1
Query: 1367 ANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQ 1507
+ G ++PFG GRR CP L+ +F+ P G+
Sbjct: 1315 SQGPHMEFVPFGAGRRQCPGALFATTMLELVLANLLYHFDWAIPGGE 1455
Score = 32.7 bits (65), Expect(5) = 1e-031
Identities = 10/37 (27%), Positives = 22/37 (59%)
Frame = +2 / +1
Query: 1199 LVPHMNLHDAKLGGYDIPAESKILVNAWYLANNPDSW 1309
L+ + + ++ GYDIP + +++NA+ + +P W
Sbjct: 1144 LIHRASQENCRVMGYDIPKGTAVMINAFAVGRDPAHW 1254
Score = 28.6 bits (56), Expect(3) = 1e-006
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = -1 / -2
Query: 1503 PGGGSSSKFWTRRPMVMPRMGRARMIPGQLLRPTPKG 1393
P G + SK ++R M A PG LRP P G
Sbjct: 1451 PPGIAQSK*YSRLASTSSSMVVANRAPGHCLRPAPNG 1341
Score = 26.7 bits (52), Expect(3) = 1e-006
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -1 / -2
Query: 1056 GWFTSSATAHSIDHSVVSIAATLM 985
G TSSA AHS +VVS+AA M
Sbjct: 998 GLRTSSAMAHSSVAAVVSVAAEKM 927
>emb|AJ495774.1|HVU495774 Hordeum vulgare partial mRNA for putative cytochrome P450
Length = 1790
Score = 82.6 bits (174), Expect(5) = 2e-031
Identities = 34/91 (37%), Positives = 54/91 (59%)
Frame = +2 / +2
Query: 242 HRNLAALSRKFGDVFLLRMGQRNLVVVSSPPLAREVLHTQGVEFGSRTRNVVFDIFTDKG 421
HR L +LSR++G V LLR+G+ V+VS+P A VL T + F +RT D+
Sbjct: 233 HRALLSLSRRYGPVMLLRLGEVPNVIVSTPEAAVLVLKTNDLTFATRTSGPTLDVVGSAS 412
Query: 422 QDMVFTVYGDHWRKMRRIMTVPFFTNKVVQQ 514
+ ++F YG+HWR+MR++ V + V++
Sbjct: 413 EGIIFAPYGEHWRQMRKVCVVELLSAMQVRR 505
Score = 42.8 bits (87), Expect(3) = 8e-007
Identities = 21/53 (39%), Positives = 28/53 (52%)
Frame = -3 / -2
Query: 493 EEGHGHDAAHLAPVVAVHGEHHVLPLVREDVEDHVAGAGAELHALRVEHLPRQ 335
E+ H D AHL PV+AV E L +DV+ AG G E + +EH R+
Sbjct: 484 EQLHDADLAHLPPVLAVGREDDALAGAADDVQRGAAGTGGEGEVVGLEHQHRR 326
Score = 37.3 bits (75), Expect(5) = 2e-031
Identities = 15/42 (35%), Positives = 28/42 (66%)
Frame = +2 / +2
Query: 974 IVENINVAAIETTLWSIEWAVAELVNHPEIQQKLRQELDTVL 1099
++ +I AA +TT ++EWA+AELV +P+ + + E+ +L
Sbjct: 980 VIFDIFSAATDTTAATLEWAMAELVXNPQAMARAKLEVRQML 1105
Score = 35.4 bits (71), Expect(5) = 2e-031
Identities = 16/29 (55%), Positives = 19/29 (65%)
Frame = +2 / +2
Query: 1115 ITEPDTHNLPYLQAVIKETLRLRMAIPLL 1201
IT D L YL+ VIKETLRL + PL+
Sbjct: 1127 ITSADLAGLHYLRMVIKETLRLHPSAPLI 1213
Score = 35.0 bits (70), Expect(5) = 2e-031
Identities = 13/47 (27%), Positives = 20/47 (42%)
Frame = +2 / +2
Query: 1367 ANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQ 1507
+ G ++PFG GRR CP L+ +F+ P G+
Sbjct: 1379 SQGPHMEFVPFGAGRRQCPGALFATTMLELVLANLLYHFDWAIPGGE 1519
Score = 32.7 bits (65), Expect(5) = 2e-031
Identities = 10/37 (27%), Positives = 22/37 (59%)
Frame = +2 / +2
Query: 1199 LVPHMNLHDAKLGGYDIPAESKILVNAWYLANNPDSW 1309
L+ + + ++ GYDIP + +++NA+ + +P W
Sbjct: 1208 LIHRASQENCRVMGYDIPKGTAVMINAFAVGRDPAHW 1318
Score = 28.6 bits (56), Expect(3) = 8e-007
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = -1 / -3
Query: 1503 PGGGSSSKFWTRRPMVMPRMGRARMIPGQLLRPTPKG 1393
P G + SK ++R M A PG LRP P G
Sbjct: 1515 PPGIAQSK*YSRLASTSSSMVVANRAPGHCLRPAPNG 1405
Score = 27.6 bits (54), Expect(3) = 8e-007
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -1 / -3
Query: 1056 GWFTSSATAHSIDHSVVSIAATLM 985
G TSSA AHS +VVS+AA M
Sbjct: 1062 GLXTSSAMAHSSVAAVVSVAAEKM 991
>gb|BG345061.2|BG345061 HVSMEg0018H23f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0018H23f, mRNA sequence
Length = 481
Score = 135 bits (289), Expect = 8e-031
Identities = 58/77 (75%), Positives = 60/77 (77%)
Frame = -1 / -1
Query: 1584 GLHTMVECFKMWRLNWPPFSVVSTLSCPGGGSSSKFWTRRPMVMPRMGRARMIPGQLLRP 1405
GL TMV C ++W LN P FSVVS LSCPGGGSSSKF TRRP VMP MG ARMIPGQL RP
Sbjct: 244 GLQTMVACLRIWLLNCPGFSVVSILSCPGGGSSSKFCTRRPSVMPMMGSARMIPGQLRRP 65
Query: 1404 TPKGRYLKSLPLASTCF 1354
TPKG KSLP AST F
Sbjct: 64 TPKGTNRKSLPWASTDF 14
Score = 133 bits (284), Expect = 4e-030
Identities = 54/77 (70%), Positives = 59/77 (76%)
Frame = +2 / +3
Query: 1355 KHVEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQDKVDTTEKG 1534
K VEA+GNDFR++PFGVGRRSCP RLVQNFELLPPPGQDK+DTTEK
Sbjct: 15 KSVEAHGNDFRFVPFGVGRRSCPGIILALPIIGITLGRLVQNFELLPPPGQDKIDTTEKP 194
Query: 1535 GQFSLHILKHSTIVCKP 1585
GQFS ILKH+TIVCKP
Sbjct: 195 GQFSNQILKHATIVCKP 245
Score = 46.9 bits (96), Expect = 3e-004
Identities = 17/32 (53%), Positives = 20/32 (62%)
Frame = -2 / -2
Query: 1601 ALKAFLACTRWWNASRCGD*TGLPSRWCXPCP 1506
++K +AC RWW A G *T L SRWC CP
Sbjct: 261 SIKPRVACRRWWRA*GSGC*TALASRWCRSCP 166
Score = 46.4 bits (95), Expect = 5e-004
Identities = 19/40 (47%), Positives = 21/40 (52%)
Frame = +1 / +2
Query: 1477 ELXXXXXXXXGQGXHHREGRPVQSPHLEAFHHRVQAKNAL 1596
EL GQ HHRE R VQ P +A HHR+QA L
Sbjct: 137 ELRAAAAAGAGQDRHHREARAVQQPDPQARHHRLQATRGL 256
Score = 42.3 bits (86), Expect = 0.008
Identities = 20/37 (54%), Positives = 23/37 (62%)
Frame = -3 / -3
Query: 1585 WLAHDGGMLQDVETELASXXXXXXXXLPGRRQQLEVL 1475
WLA DGG+L+D+ EL LP RRQQLEVL
Sbjct: 245 WLADDGGVLEDLVAELPWLLGGVDLVLPRRRQQLEVL 135
>gb|BQ767241.1|BQ767241 EBro08_SQ008_I11_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ008_I11 5', mRNA sequence
Length = 492
Score = 135 bits (289), Expect = 8e-031
Identities = 58/77 (75%), Positives = 60/77 (77%)
Frame = -1 / -3
Query: 1584 GLHTMVECFKMWRLNWPPFSVVSTLSCPGGGSSSKFWTRRPMVMPRMGRARMIPGQLLRP 1405
GL TMV C ++W LN P FSVVS LSCPGGGSSSKF TRRP VMP MG ARMIPGQL RP
Sbjct: 253 GLQTMVACLRIWLLNCPGFSVVSILSCPGGGSSSKFCTRRPSVMPMMGSARMIPGQLRRP 74
Query: 1404 TPKGRYLKSLPLASTCF 1354
TPKG KSLP AST F
Sbjct: 73 TPKGTNRKSLPWASTDF 23
Score = 133 bits (284), Expect = 4e-030
Identities = 54/77 (70%), Positives = 59/77 (76%)
Frame = +2 / +3
Query: 1355 KHVEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQDKVDTTEKG 1534
K VEA+GNDFR++PFGVGRRSCP RLVQNFELLPPPGQDK+DTTEK
Sbjct: 24 KSVEAHGNDFRFVPFGVGRRSCPGIILALPIIGITLGRLVQNFELLPPPGQDKIDTTEKP 203
Query: 1535 GQFSLHILKHSTIVCKP 1585
GQFS ILKH+TIVCKP
Sbjct: 204 GQFSNQILKHATIVCKP 254
Score = 46.9 bits (96), Expect = 3e-004
Identities = 17/32 (53%), Positives = 20/32 (62%)
Frame = -2 / -1
Query: 1601 ALKAFLACTRWWNASRCGD*TGLPSRWCXPCP 1506
++K +AC RWW A G *T L SRWC CP
Sbjct: 270 SIKPRVACRRWWRA*GSGC*TALASRWCRSCP 175
Score = 46.4 bits (95), Expect = 5e-004
Identities = 19/40 (47%), Positives = 21/40 (52%)
Frame = +1 / +2
Query: 1477 ELXXXXXXXXGQGXHHREGRPVQSPHLEAFHHRVQAKNAL 1596
EL GQ HHRE R VQ P +A HHR+QA L
Sbjct: 146 ELRAAAAAGAGQDRHHREARAVQQPDPQARHHRLQATRGL 265
Score = 42.3 bits (86), Expect = 0.008
Identities = 20/37 (54%), Positives = 23/37 (62%)
Frame = -3 / -2
Query: 1585 WLAHDGGMLQDVETELASXXXXXXXXLPGRRQQLEVL 1475
WLA DGG+L+D+ EL LP RRQQLEVL
Sbjct: 254 WLADDGGVLEDLVAELPWLLGGVDLVLPRRRQQLEVL 144
>gb|BJ465823.1|BJ465823 BJ465823 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags27h18 3', mRNA sequence
Length = 426
Score = 131 bits (281), Expect = 1e-029
Identities = 56/74 (75%), Positives = 58/74 (78%)
Frame = -1 / +3
Query: 1584 GLHTMVECFKMWRLNWPPFSVVSTLSCPGGGSSSKFWTRRPMVMPRMGRARMIPGQLLRP 1405
GL TMV C ++W LN P FSVVS LSCPGGGSSSKF TRRP VMP MG ARMIPGQL RP
Sbjct: 204 GLQTMVACLRIWLLNCPGFSVVSILSCPGGGSSSKFCTRRPSVMPMMGSARMIPGQLRRP 383
Query: 1404 TPKGRYLKSLPLAS 1363
TPKG KSLP AS
Sbjct: 384 TPKGTNRKSLPWAS 425
Score = 129 bits (276), Expect = 5e-029
Identities = 52/74 (70%), Positives = 57/74 (77%)
Frame = +2 / -3
Query: 1364 EANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQDKVDTTEKGGQF 1543
EA+GNDFR++PFGVGRRSCP RLVQNFELLPPPGQDK+DTTEK GQF
Sbjct: 424 EAHGNDFRFVPFGVGRRSCPGIILALPIIGITLGRLVQNFELLPPPGQDKIDTTEKPGQF 245
Query: 1544 SLHILKHSTIVCKP 1585
S ILKH+TIVCKP
Sbjct: 244 SNQILKHATIVCKP 203
Score = 46.9 bits (96), Expect = 3e-004
Identities = 17/32 (53%), Positives = 20/32 (62%)
Frame = -2 / +1
Query: 1601 ALKAFLACTRWWNASRCGD*TGLPSRWCXPCP 1506
++K +AC RWW A G *T L SRWC CP
Sbjct: 187 SIKPRVACRRWWRA*GSGC*TALASRWCRSCP 282
Score = 46.4 bits (95), Expect = 5e-004
Identities = 19/40 (47%), Positives = 21/40 (52%)
Frame = +1 / -2
Query: 1477 ELXXXXXXXXGQGXHHREGRPVQSPHLEAFHHRVQAKNAL 1596
EL GQ HHRE R VQ P +A HHR+QA L
Sbjct: 311 ELRAAAAAGAGQDRHHREARAVQQPDPQARHHRLQATRGL 192
Score = 42.3 bits (86), Expect = 0.008
Identities = 20/37 (54%), Positives = 23/37 (62%)
Frame = -3 / +2
Query: 1585 WLAHDGGMLQDVETELASXXXXXXXXLPGRRQQLEVL 1475
WLA DGG+L+D+ EL LP RRQQLEVL
Sbjct: 203 WLADDGGVLEDLVAELPWLLGGVDLVLPRRRQQLEVL 313
>gb|AL502425.1|AL502425 AL502425 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW07I21u 3', mRNA sequence
Length = 554
Score = 131 bits (280), Expect = 1e-029
Identities = 56/75 (74%), Positives = 58/75 (77%)
Frame = -1 / +2
Query: 1584 GLHTMVECFKMWRLNWPPFSVVSTLSCPGGGSSSKFWTRRPMVMPRMGRARMIPGQLLRP 1405
GL TMV C ++W LN P FSVVS LSCPGGGSSSKF TRRP VMP MG ARMIPGQL RP
Sbjct: 269 GLQTMVACLRIWLLNCPGFSVVSILSCPGGGSSSKFCTRRPSVMPMMGSARMIPGQLRRP 448
Query: 1404 TPKGRYLKSLPLAST 1360
TP G KSLP AST
Sbjct: 449 TPXGTNRKSLPWAST 493
Score = 131 bits (280), Expect = 1e-029
Identities = 53/75 (70%), Positives = 58/75 (77%)
Frame = +2 / -3
Query: 1361 VEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQDKVDTTEKGGQ 1540
VEA+GNDFR++PFGVGRRSCP RLVQNFELLPPPGQDK+DTTEK GQ
Sbjct: 492 VEAHGNDFRFVPFGVGRRSCPGIILALPIIGITLGRLVQNFELLPPPGQDKIDTTEKPGQ 313
Query: 1541 FSLHILKHSTIVCKP 1585
FS ILKH+TIVCKP
Sbjct: 312 FSNQILKHATIVCKP 268
Score = 46.9 bits (96), Expect = 3e-004
Identities = 17/32 (53%), Positives = 20/32 (62%)
Frame = -2 / +3
Query: 1601 ALKAFLACTRWWNASRCGD*TGLPSRWCXPCP 1506
++K +AC RWW A G *T L SRWC CP
Sbjct: 252 SIKPRVACRRWWRA*GSGC*TALASRWCRSCP 347
Score = 46.4 bits (95), Expect = 5e-004
Identities = 19/40 (47%), Positives = 21/40 (52%)
Frame = +1 / -2
Query: 1477 ELXXXXXXXXGQGXHHREGRPVQSPHLEAFHHRVQAKNAL 1596
EL GQ HHRE R VQ P +A HHR+QA L
Sbjct: 376 ELRAAAAAGAGQDRHHREARAVQQPDPQARHHRLQATRGL 257
Score = 42.3 bits (86), Expect = 0.008
Identities = 20/37 (54%), Positives = 23/37 (62%)
Frame = -3 / +1
Query: 1585 WLAHDGGMLQDVETELASXXXXXXXXLPGRRQQLEVL 1475
WLA DGG+L+D+ EL LP RRQQLEVL
Sbjct: 268 WLADDGGVLEDLVAELPWLLGGVDLVLPRRRQQLEVL 378
>gb|BI960513.1|BI960513 HVSMEn0024N22f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0024N22f,
mRNA sequence
Length = 653
Score = 105 bits (223), Expect(2) = 2e-028
Identities = 40/86 (46%), Positives = 57/86 (66%)
Frame = +2 / +2
Query: 1052 HPEIQQKLRQELDTVLGPGHQITEPDTHNLPYLQAVIKETLRLRMAIPLLVPHMNLHDAK 1231
+P +QQKL++ELD V+G + E D NLPYL AV+KE+LRL PL++PH K
Sbjct: 5 NPXVQQKLQEELDNVVGRDRVMAETDFQNLPYLMAVVKESLRLHPPTPLMLPHKASASVK 184
Query: 1232 LGGYDIPAESKILVNAWYLANNPDSW 1309
+GGY+IP + ++VN W +A +P W
Sbjct: 185 VGGYNIPKGANVMVNVWAVARDPKVW 262
Score = 45.1 bits (92), Expect(2) = 4e-009
Identities = 29/80 (36%), Positives = 37/80 (46%)
Frame = -1 / -3
Query: 1290 ARYQALTRILLSAGMSXPPSLASWRFMCGTSSGMAIRSRSVSLITACR*GRLCVSGSVIW 1111
A T L GM PP+ + G+ SG+ R SL TA R GR S S +
Sbjct: 243 ATAHTFTMTLAPLGML*PPTFTLALALWGSMSGVGGCRRRDSLTTAIRYGRFWKSVSAMT 64
Query: 1110 WPGPSTVSSSCRSFCWISGW 1051
P+T+SSS SFC G+
Sbjct: 63 RSRPTTLSSSSCSFCCTXGF 4
Score = 41.8 bits (85), Expect(2) = 2e-028
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +2 / +2
Query: 1361 VEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPG 1504
++ G+DFR LPFG GRR CP ++ +F+ P G
Sbjct: 308 IDIKGSDFRVLPFGAGRRVCPGAQLGINLVASMIGHMLHHFKWSLPEG 451
Score = 36.8 bits (74), Expect(2) = 4e-009
Identities = 15/21 (71%), Positives = 15/21 (71%)
Frame = -1 / -3
Query: 1425 PGQLLRPTPKGRYLKSLPLAS 1363
PG LRP PKG LKSLPL S
Sbjct: 372 PGHTLRPAPKGSTLKSLPLMS 310
>gb|BQ764131.1|BQ764131 EBro03_SQ006_I11_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ006_I11 5', mRNA sequence
Length = 435
Score = 122 bits (262), Expect = 4e-027
Identities = 55/79 (69%), Positives = 60/79 (75%)
Frame = -1 / -1
Query: 1596 *SVLGLHTMVECFKMWRLNWPPFSVVSTLSCPGGGSSSKFWTRRPMVMPRMGRARMIPGQ 1417
*++ GL T V ++W +N P FSVVS LS P GGSS KF TRRP VMP MGRARMIPGQ
Sbjct: 240 *ALSGLQTTVAWLRIWLMNCPGFSVVSILSFPSGGSSWKFCTRRPSVMPMMGRARMIPGQ 61
Query: 1416 LLRPTPKGRYLKSLPLAST 1360
LLRPTPKG KSLPLAST
Sbjct: 60 LLRPTPKGTNRKSLPLAST 4
Score = 117 bits (250), Expect = 2e-025
Identities = 47/75 (62%), Positives = 54/75 (72%)
Frame = +2 / +2
Query: 1361 VEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQDKVDTTEKGGQ 1540
VEANGNDFR++PFGVGRRSCP RLVQNF+LLPP G+DK+DTTEK GQ
Sbjct: 5 VEANGNDFRFVPFGVGRRSCPGIILALPIIGITLGRLVQNFQLLPPLGKDKIDTTEKPGQ 184
Query: 1541 FSLHILKHSTIVCKP 1585
F I H+T+VCKP
Sbjct: 185 FINQIRNHATVVCKP 229
Score = 39.6 bits (80), Expect = 0.056
Identities = 19/43 (44%), Positives = 25/43 (58%)
Frame = -3 / -3
Query: 1603 LLLKRSWLAHDGGMLQDVETELASXXXXXXXXLPGRRQQLEVL 1475
+L+ WLA DGG++ D+ EL+ LP RRQ LEVL
Sbjct: 247 VLISLEWLADDGGVVADLVDELSGLFRGINLVLPQRRQ*LEVL 119
>gb|BJ545191.1|BJ545191 BJ545191 K. Sato unpublished cDNA library, cv. Akashinriki vegetative
stage leaves Hordeum vulgare subsp. vulgare cDNA clone
baak45m01 5', mRNA sequence
Length = 603
Score = 104 bits (222), Expect(2) = 5e-027
Identities = 43/105 (40%), Positives = 65/105 (61%)
Frame = +2 / +3
Query: 995 AAIETTLWSIEWAVAELVNHPEIQQKLRQELDTVLGPGHQITEPDTHNLPYLQAVIKETL 1174
A ET+ +++WA++EL+ +P + K + E+ L ++TE D NL YL+ VIKET+
Sbjct: 165 AGSETSATTLQWAMSELMRYPNVMLKAQAEVRNNLQGKSKVTEDDLANLKYLRLVIKETM 344
Query: 1175 RLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWYLANNPDSW 1309
RL A PLL+P + K+ GYDIP + +LVNAW + +P W
Sbjct: 345 RLHPAAPLLLPREAMEACKILGYDIPEGTTVLVNAWAIGRDPKYW 479
Score = 37.7 bits (76), Expect(2) = 5e-027
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +2 / +3
Query: 1361 VEANGNDFRYLPFGVGRRSCP 1423
V+ G +F Y+PFG GRR CP
Sbjct: 525 VDFKGTNFEYIPFGAGRRMCP 587
Score = 36.3 bits (73), Expect(2) = 8e-006
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = -1 / -3
Query: 1437 ARMIPGQLLRPTPKGRYLKSLPLAST 1360
A +IPG +L P P G Y K +PL ST
Sbjct: 601 ANVIPGHILLPAPNGMYSKFVPLKST 524
Score = 34.1 bits (68), Expect(2) = 8e-006
Identities = 21/54 (38%), Positives = 30/54 (55%)
Frame = -1 / -3
Query: 1278 ALTRILLSAGMSXPPSLASWRFMCGTSSGMAIRSRSVSLITACR*GRLCVSGSV 1117
A T+ ++ +GMS P L + G S+G A + VSL+T+ R RL S SV
Sbjct: 448 AFTKTVVPSGMSYPRILQASMASLGRSNGAAGCNLIVSLMTSLRYLRLAKSSSV 287
>gb|BI958239.1|BI958239 HVSMEn0014A11f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0014A11f,
mRNA sequence
Length = 674
Score = 122 bits (261), Expect = 6e-027
Identities = 51/131 (38%), Positives = 80/131 (61%)
Frame = +2 / +1
Query: 917 DHILEAQQKGEINEDNVLFIVENINVAAIETTLWSIEWAVAELVNHPEIQQKLRQELDTV 1096
D L ++ +I + +V ++ N+ VA ETT +EWAVAEL+ HP++ ++ ++ELD V
Sbjct: 76 DKSLTGGEEDKITDTDVKALILNLFVAGTETTSTMVEWAVAELIRHPDMLKRAQEELDAV 255
Query: 1097 LGPGHQITEPDTHNLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVN 1276
+G + E D L +L AVIKET RL + PL +P M + ++ GY IP +++LVN
Sbjct: 256 VGRDKLVAESDLPRLAFLGAVIKETFRLHPSTPLSLPRMASEECEVAGYRIPKGTELLVN 435
Query: 1277 AWYLANNPDSW 1309
W +A +P W
Sbjct: 436 VWGIARDPALW 468
Score = 58.8 bits (122), Expect = 9e-008
Identities = 44/109 (40%), Positives = 56/109 (51%)
Frame = -1 / -1
Query: 1275 LTRILLSAGMSXPPSLASWRFMCGTSSGMAIRSRSVSLITACR*GRLCVSGSVIWWPGPS 1096
LT + GM P + S + G+ SG+ SR+VSL+TA R R S S P+
Sbjct: 434 LTSSSVPLGMR*PATSHSSEAIRGSDSGVDGCSRNVSLMTAPRKARRGRSDSATSLSRPT 255
Query: 1095 TVSSSCRSFCWISGWFTSSATAHSIDHSVVSIAATLMFSTMKSTLSSLI 949
T SSS + +SG SSATAHS VVS+ AT FS T S+I
Sbjct: 254 TASSSSCARFSMSGCRISSATAHSTIVDVVSVPATNKFSMSALTSVSVI 108
Score = 40.5 bits (82), Expect = 0.030
Identities = 17/38 (44%), Positives = 23/38 (60%)
Frame = -3 / -3
Query: 1252 GDVVXAELGVVEVHVRHQQRDGHPQPQRLLDHRLQVGE 1139
GD V +L ++ H R +QR QP+RLLD R + GE
Sbjct: 411 GDAVAGDLALLGGHPRQRQRRRRVQPERLLDDRAEEGE 298
>gb|BF628382.2|BF628382 HVSMEb0003O04f Hordeum vulgare seedling shoot EST library HVcDNA0002
(Dehydration stress) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEb0003O04f, mRNA sequence
Length = 507
Score = 122 bits (260), Expect = 8e-027
Identities = 44/119 (36%), Positives = 76/119 (63%)
Frame = +2 / +1
Query: 947 EINEDNVLFIVENINVAAIETTLWSIEWAVAELVNHPEIQQKLRQELDTVLGPGHQITEP 1126
++N + V +++ E++ ++EWA++EL+ PE+ K +ELD V+G G +TE
Sbjct: 148 KLNREGVKAFTQDLIAGGTESSAVTVEWALSELLKKPEVLAKATEELDRVVGRGRWVTEK 327
Query: 1127 DTHNLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWYLANNPD 1303
D +LPY+ A++KET+RL P+LVP ++ D + GYDIPA +++LV W + +P+
Sbjct: 328 DMPSLPYVDAIVKETMRLHPVAPMLVPRLSREDTSINGYDIPAGTRVLVMVWSIGRDPE 504
Score = 56.5 bits (117), Expect = 4e-007
Identities = 38/92 (41%), Positives = 49/92 (53%)
Frame = -1 / -2
Query: 1275 LTRILLSAGMSXPPSLASWRFMCGTSSGMAIRSRSVSLITACR*GRLCVSGSVIWWPGPS 1096
+T + AGMS P S R GTS G +R VSL A *GRL +S SV P P+
Sbjct: 476 MTSTRVPAGMS*PLMDVSSRERRGTSIGATGCNRMVSLTMAST*GRLGMSFSVTHRPRPT 297
Query: 1095 TVSSSCRSFCWISGWFTSSATAHSIDHSVVSI 1000
T S+S + SG+F SS AHS + +S+
Sbjct: 296 TRSNSSVALASTSGFFRSSERAHSTVTAELSV 201
>gb|BI956493.1|BI956493 HVSMEn0003M04f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0003M04f,
mRNA sequence
Length = 942
Score = 119 bits (255), Expect = 4e-026
Identities = 50/131 (38%), Positives = 78/131 (59%)
Frame = +2 / +2
Query: 917 DHILEAQQKGEINEDNVLFIVENINVAAIETTLWSIEWAVAELVNHPEIQQKLRQELDTV 1096
D L ++ +I + +V ++ N+ VA ETT +EWAVAEL+ HP++ ++ +ELD V
Sbjct: 17 DKSLTGGEEDKITDTDVKALILNLFVAGTETTSTIVEWAVAELIRHPDMLKRAHEELDAV 196
Query: 1097 LGPGHQITEPDTHNLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVN 1276
+G + E D L +L AVIKET RL + PL +P M + ++ GY IP +++LVN
Sbjct: 197 VGRDKLVAESDLPRLAFLGAVIKETFRLHPSTPLSLPRMASQECEVAGYRIPKGTELLVN 376
Query: 1277 AWYLANNPDSW 1309
W + +P W
Sbjct: 377 VWGITRDPALW 409
Score = 65.2 bits (136), Expect = 1e-009
Identities = 45/109 (41%), Positives = 57/109 (52%)
Frame = -1 / -1
Query: 1275 LTRILLSAGMSXPPSLASWRFMCGTSSGMAIRSRSVSLITACR*GRLCVSGSVIWWPGPS 1096
LT + GM P + SW + G+ SG+ SR+VSL+TA R R S S P+
Sbjct: 375 LTSSSVPLGMR*PATSHSWEAIRGSDSGVDGCSRNVSLMTAPRKARRGRSDSATSLSRPT 196
Query: 1095 TVSSSCRSFCWISGWFTSSATAHSIDHSVVSIAATLMFSTMKSTLSSLI 949
T SSS + +SG SSATAHS VVS+ AT FS T S+I
Sbjct: 195 TASSSSCARFSMSGCRISSATAHSTIVDVVSVPATNKFSMSALTSVSVI 49
Score = 38.6 bits (78), Expect = 0.11
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = -3 / -3
Query: 1252 GDVVXAELGVVEVHVRHQQRDGHPQPQRLLDHRLQVGE 1139
GD V + ++ H R +QR QP+RLLD R + GE
Sbjct: 352 GDAVAGDFALLGGHPRQRQRRRRVQPERLLDDRAEEGE 239
>gb|BQ471267.1|BQ471267 HV01P03T HV Hordeum vulgare subsp. vulgare cDNA clone HV01P03
5-PRIME, mRNA sequence
Length = 610
Score = 99.6 bits (211), Expect(2) = 2e-025
Identities = 41/117 (35%), Positives = 64/117 (54%)
Frame = +2 / +2
Query: 959 DNVLFIVENINVAAIETTLWSIEWAVAELVNHPEIQQKLRQELDTVLGPGHQITEPDTHN 1138
D+ I+ + +AA +T+ S W + EL+ HP + K + E+ G Q+ D
Sbjct: 14 DHAKSILFDTFMAATDTSSISSYWVMTELIRHPRVLHKAQAEVRAAAGGAPQVRISDMPK 193
Query: 1139 LPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWYLANNPDSW 1309
L YL+ V+ ET R+ +LVP + +LGGYDIPA + ++VNAW + +P SW
Sbjct: 194 LKYLRMVLSETFRMHPPATMLVPRETMRPIRLGGYDIPANTMLMVNAWAIGRDPASW 364
Score = 37.3 bits (75), Expect(2) = 2e-025
Identities = 17/53 (32%), Positives = 20/53 (37%)
Frame = +2 / +2
Query: 1361 VEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQDKVD 1519
V+ NG + LPFG GRR CP L+ F P G D
Sbjct: 410 VDFNGGHYELLPFGAGRRICPGLAMGVANTEFILANLLYCFNWALPQGMRSED 568
>gb|BJ466813.1|BJ466813 BJ466813 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags34b17 3', mRNA sequence
Length = 729
Score = 98.7 bits (209), Expect(2) = 4e-025
Identities = 39/106 (36%), Positives = 59/106 (55%)
Frame = +2 / -1
Query: 992 VAAIETTLWSIEWAVAELVNHPEIQQKLRQELDTVLGPGHQITEPDTHNLPYLQAVIKET 1171
+AA +T+ S W + EL+ HP + K + E+ G Q+ D L YL+ V+ ET
Sbjct: 729 MAATDTSSISSYWVMTELIRHPRVLHKAQAEVRAAAGGAPQVRISDMPKLKYLRMVLSET 550
Query: 1172 LRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWYLANNPDSW 1309
R+ +LVP + +LGGYDIPA + ++VNAW + +P SW
Sbjct: 549 FRMHPPATMLVPRETMRPIRLGGYDIPANTMLMVNAWAIGRDPASW 412
Score = 37.3 bits (75), Expect(2) = 4e-025
Identities = 17/53 (32%), Positives = 20/53 (37%)
Frame = +2 / -1
Query: 1361 VEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQDKVD 1519
V+ NG + LPFG GRR CP L+ F P G D
Sbjct: 366 VDFNGGHYELLPFGAGRRICPGLAMGVANTEFILANLLYCFNWALPQGMRSED 208
>gb|AV919454.1|AV919454 AV919454 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags6b21 3', mRNA sequence
Length = 712
Score = 98.7 bits (209), Expect(2) = 4e-025
Identities = 39/106 (36%), Positives = 59/106 (55%)
Frame = +2 / -1
Query: 992 VAAIETTLWSIEWAVAELVNHPEIQQKLRQELDTVLGPGHQITEPDTHNLPYLQAVIKET 1171
+AA +T+ S W + EL+ HP + K + E+ G Q+ D L YL+ V+ ET
Sbjct: 700 MAATDTSSISSYWVMTELIRHPRVLHKAQAEVRAAAGGAPQVRISDMPKLKYLRMVLSET 521
Query: 1172 LRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWYLANNPDSW 1309
R+ +LVP + +LGGYDIPA + ++VNAW + +P SW
Sbjct: 520 FRMHPPATMLVPRETMRPIRLGGYDIPANTMLMVNAWAIGRDPASW 383
Score = 37.3 bits (75), Expect(2) = 4e-025
Identities = 17/53 (32%), Positives = 20/53 (37%)
Frame = +2 / -1
Query: 1361 VEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQDKVD 1519
V+ NG + LPFG GRR CP L+ F P G D
Sbjct: 337 VDFNGGHYELLPFGAGRRICPGLAMGVANTEFILANLLYCFNWALPQGMRSED 179
>gb|AV917230.1|AV917230 AV917230 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags18a18 5', mRNA sequence
Length = 619
Score = 98.7 bits (209), Expect(2) = 4e-025
Identities = 39/106 (36%), Positives = 59/106 (55%)
Frame = +2 / +3
Query: 992 VAAIETTLWSIEWAVAELVNHPEIQQKLRQELDTVLGPGHQITEPDTHNLPYLQAVIKET 1171
+AA +T+ S W + EL+ HP + K + E+ G Q+ D L YL+ V+ ET
Sbjct: 18 MAATDTSSISSYWVMTELIRHPRVLHKAQAEVRAAAGGAPQVRISDMPKLKYLRMVLSET 197
Query: 1172 LRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWYLANNPDSW 1309
R+ +LVP + +LGGYDIPA + ++VNAW + +P SW
Sbjct: 198 FRMHPPATMLVPRETMRPIRLGGYDIPANTMLMVNAWAIGRDPASW 335
Score = 37.3 bits (75), Expect(2) = 4e-025
Identities = 17/53 (32%), Positives = 20/53 (37%)
Frame = +2 / +3
Query: 1361 VEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQDKVD 1519
V+ NG + LPFG GRR CP L+ F P G D
Sbjct: 381 VDFNGGHYELLPFGAGRRICPGLAMGVANTEFILANLLYCFNWALPQGMRSED 539
>gb|BJ464883.1|BJ464883 BJ464883 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags36h03 5', mRNA sequence
Length = 582
Score = 98.7 bits (209), Expect(2) = 4e-025
Identities = 39/106 (36%), Positives = 59/106 (55%)
Frame = +2 / +3
Query: 992 VAAIETTLWSIEWAVAELVNHPEIQQKLRQELDTVLGPGHQITEPDTHNLPYLQAVIKET 1171
+AA +T+ S W + EL+ HP + K + E+ G Q+ D L YL+ V+ ET
Sbjct: 18 MAATDTSSISSYWVMTELIRHPRVLHKAQAEVRAAAGGAPQVRISDMPKLKYLRMVLSET 197
Query: 1172 LRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWYLANNPDSW 1309
R+ +LVP + +LGGYDIPA + ++VNAW + +P SW
Sbjct: 198 FRMHPPATMLVPRETMRPIRLGGYDIPANTMLMVNAWAIGRDPASW 335
Score = 37.3 bits (75), Expect(2) = 4e-025
Identities = 17/53 (32%), Positives = 20/53 (37%)
Frame = +2 / +3
Query: 1361 VEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQDKVD 1519
V+ NG + LPFG GRR CP L+ F P G D
Sbjct: 381 VDFNGGHYELLPFGAGRRICPGLAMGVANTEFILANLLYCFNWALPQGMRSED 539
>gb|AJ433404.1|AJ433404 AJ433404 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200022D10F1, mRNA sequence
Length = 363
Score = 109 bits (232), Expect(2) = 4e-025
Identities = 45/65 (69%), Positives = 49/65 (75%)
Frame = -1 / -3
Query: 1587 LGLHTMVECFKMWRLNWPPFSVVSTLSCPGGGSSSKFWTRRPMVMPRMGRARMIPGQLLR 1408
+ LH MV C ++W LN P FSVVS LSCPGGGSSSKF TR P VMP MG ARMIPGQL R
Sbjct: 295 VSLHNMVACLRIWLLNCPGFSVVSILSCPGGGSSSKFCTRCPSVMPMMGSARMIPGQLRR 116
Query: 1407 PTPKG 1393
P +G
Sbjct: 115 PDAEG 101
Score = 93.2 bits (197), Expect(2) = 1e-023
Identities = 38/63 (60%), Positives = 42/63 (66%)
Frame = +2 / +3
Query: 1394 PFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQDKVDTTEKGGQFSLHILKHSTI 1573
P GRRSCP LVQN ELLPPPGQDK+DTTEK GQFS HILKH+T+
Sbjct: 102 PSASGRRSCPGIILALPIIGITLGHLVQNLELLPPPGQDKIDTTEKPGQFSNHILKHATM 281
Query: 1574 VCK 1582
+CK
Sbjct: 282 LCK 290
Score = 44.6 bits (91), Expect = 0.002
Identities = 20/47 (42%), Positives = 24/47 (51%)
Frame = +1 / +2
Query: 1477 ELXXXXXXXXGQGXHHREGRPVQSPHLEAFHHRVQAKNALRAAHTSV 1617
EL GQ HHRE R VQ P+ +A HH +QA + L SV
Sbjct: 185 ELRAAAAAGAGQDRHHREARAVQQPYPQARHHVMQAHSRLD*GQISV 325
Score = 41.4 bits (84), Expect = 0.016
Identities = 15/26 (57%), Positives = 15/26 (57%)
Frame = -2 / -1
Query: 1583 ACTRWWNASRCGD*TGLPSRWCXPCP 1506
AC WW A G *T L SRWC CP
Sbjct: 291 ACITWWRA*GYGC*TALASRWCRSCP 214
Score = 37.7 bits (76), Expect(2) = 1e-023
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +2 / +2
Query: 1295 NPDSWXXXXXXXXXXXXXXXKHVEANGNDFRYLPFGV 1405
+P W K VEA+GNDFR++PFGV
Sbjct: 2 SPKRWVRADEFRPERFLEEEKSVEAHGNDFRFVPFGV 112
Score = 26.7 bits (52), Expect(2) = 4e-025
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = -1 / -1
Query: 1404 TPKGRYLKSLPLASTCF 1354
TPKG KSLP AST F
Sbjct: 111 TPKGTNRKSLPWASTDF 61
>gb|BE519743.1|BE519743 HV_CEb0021A21f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0021A21f, mRNA sequence
Length = 627
Score = 77.6 bits (163), Expect(3) = 8e-025
Identities = 31/60 (51%), Positives = 43/60 (71%)
Frame = +2 / +2
Query: 1022 IEWAVAELVNHPEIQQKLRQELDTVLGPGHQITEPDTHNLPYLQAVIKETLRLRMAIPLL 1201
IEW + +L+ +PE+ +K+++EL TVLG + E D LPYLQAV KE LRLRM +PL+
Sbjct: 17 IEWGMVDLLQNPEVMRKVKEELTTVLGEKPLMEESDIGRLPYLQAVAKEILRLRMVVPLV 196
Score = 40.5 bits (82), Expect(3) = 8e-025
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +2 / +2
Query: 1199 LVPHMNLHDAKLGGYDIPAESKILVNAWYLANNPDSW 1309
LVP D ++ GY IP + +++NAW + N D+W
Sbjct: 191 LVPRKAEADIEVNGYRIPKGTNVILNAWAINRNADAW 301
Score = 34.5 bits (69), Expect(3) = 8e-025
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +2 / +2
Query: 1373 GNDFRYLPFGVGRRSCP 1423
G DF +PFG+GRR CP
Sbjct: 374 GQDFEMIPFGLGRRICP 424
Score = 34.1 bits (68), Expect = 2.5
Identities = 17/42 (40%), Positives = 20/42 (47%)
Frame = -1 / -1
Query: 1497 GGSSSKFWTRRPMVMPRMGRARMIPGQLLRPTPKGRYLKSLP 1372
G S S W+ P + A IPGQ+ RP P G KS P
Sbjct: 498 GSSHSNRWSSVPRIRGISF*ASGIPGQMRRPRPNGIISKSCP 373
>gb|BF256412.2|BF256412 HVSMEf0009I22f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEf0009I22f, mRNA sequence
Length = 765
Score = 92.7 bits (196), Expect(2) = 1e-024
Identities = 36/44 (81%), Positives = 41/44 (93%)
Frame = +2 / +2
Query: 902 LKCAIDHILEAQQKGEINEDNVLFIVENINVAAIETTLWSIEWA 1033
+KCA+DHILEA++KGEIN DNVL+IVENINVA I TTLWSIEWA
Sbjct: 509 IKCAMDHILEAERKGEINHDNVLYIVENINVATIGTTLWSIEWA 640
Score = 69.3 bits (145), Expect(2) = 4e-019
Identities = 33/43 (76%), Positives = 34/43 (79%)
Frame = -1 / -1
Query: 1032 AHSIDHSVVSIAATLMFSTMKSTLSSLISPFCCASSM*SMAHL 904
AHSIDHSVV + ATLMFSTM TLS LISPF AS M SMAHL
Sbjct: 639 AHSIDHSVVPMVATLMFSTM*RTLSWLISPFLSASRMWSMAHL 511
Score = 54.7 bits (113), Expect = 2e-006
Identities = 26/42 (61%), Positives = 27/42 (64%)
Frame = +1 / +1
Query: 904 QVRH*SHTGGTAEG*DQRGQRALHRREH*RCSDRDHAVVDRV 1029
QVRH H G EG DQ QR LHRREH R + D AVVDRV
Sbjct: 511 QVRHGPHPGSRKEGRDQPRQRPLHRREHQRRNHWDDAVVDRV 636
Score = 46.4 bits (95), Expect(2) = 4e-019
Identities = 17/25 (68%), Positives = 18/25 (72%)
Frame = -1 / -2
Query: 1110 WPGPSTVSSSCRSFCWISGWFTSSA 1036
WPGPST + F WISGWFTSSA
Sbjct: 716 WPGPSTGTFPWAGFWWISGWFTSSA 642
Score = 41.8 bits (85), Expect(2) = 1e-024
Identities = 18/26 (69%), Positives = 19/26 (73%)
Frame = +2 / +1
Query: 1034 VAELVNHPEIQQKLRQELDTVLGPGH 1111
+AELVNHPEI QK Q VLGPGH
Sbjct: 640 LAELVNHPEIHQKPAQGNVPVLGPGH 717
>gb|BF624750.2|BF624750 HVSMEa0017K07f Hordeum vulgare seedling shoot EST library HVcDNA0001
(Cold stress) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEa0017K07f, mRNA sequence
Length = 763
Score = 110 bits (235), Expect(2) = 1e-024
Identities = 43/109 (39%), Positives = 69/109 (63%)
Frame = +2 / +1
Query: 983 NINVAAIETTLWSIEWAVAELVNHPEIQQKLRQELDTVLGPGHQITEPDTHNLPYLQAVI 1162
N+ A ETT + EWA++ L+NHP +K + E+D +G +T D L YLQ ++
Sbjct: 184 NLFGAGTETTSSTTEWAMSLLLNHPAALRKAQAEIDVAVGTCRLVTADDVPRLAYLQCIV 363
Query: 1163 KETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWYLANNPDSW 1309
ETLRL A P+L+PH + D K+GGY++P+ + ++VNA+ + +P +W
Sbjct: 364 SETLRLYPAAPMLLPHQSSADCKVGGYNVPSGTMLMVNAYAIHRDPAAW 510
Score = 67.5 bits (141), Expect = 2e-010
Identities = 39/100 (39%), Positives = 52/100 (52%)
Frame = -1 / -3
Query: 1278 ALTRILLSAGMSXPPSLASWRFMCGTSSGMAIRSRSVSLITACR*GRLCVSGSVIWWPGP 1099
A T ++ G PP+L S CG+S G A SRSVSL CR* S +V P
Sbjct: 479 AFTISIVPLGTL*PPTLQSADDWCGSSIGAAGYSRSVSLTMHCR*ASRGTSSAVTSRQVP 300
Query: 1098 STVSSSCRSFCWISGWFTSSATAHSIDHSVVSIAATLMFS 979
+ S S +F +GWF+S+ AHS+ VVS+ A F+
Sbjct: 299 TATSISACAFLSAAGWFSSNDMAHSVVDDVVSVPAPNKFA 180
Score = 35.0 bits (70), Expect = 1.3
Identities = 19/36 (52%), Positives = 19/36 (52%)
Frame = -3 / -2
Query: 1246 VVXAELGVVEVHVRHQQRDGHPQPQRLLDHRLQVGE 1139
VV A L V VR Q R QPQRL LQVGE
Sbjct: 447 VVAANLAVRRRLVRQQHRRRRVQPQRLAHDALQVGE 340
Score = 24.0 bits (46), Expect(2) = 1e-024
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = +2 / +1
Query: 1391 LPFGVGRRSCP 1423
+PFG+G R CP
Sbjct: 574 IPFGMGLRRCP 606
>gb|BJ546119.1|BJ546119 BJ546119 K. Sato unpublished cDNA library, cv. Akashinriki vegetative
stage leaves Hordeum vulgare subsp. vulgare cDNA clone
baak33l17 3', mRNA sequence
Length = 689
Score = 86.8 bits (183), Expect(2) = 1e-024
Identities = 32/65 (49%), Positives = 47/65 (72%)
Frame = +2 / -1
Query: 1115 ITEPDTHNLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWYLAN 1294
I+E D +N+ YL+AVIKE+LRLR PLL PH+ + D + GY +PA ++++VNAW +
Sbjct: 509 ISETDMNNMTYLRAVIKESLRLRPVAPLLAPHLAMADCIIDGYIVPAGTRVVVNAWAIGR 330
Query: 1295 NPDSW 1309
+P SW
Sbjct: 329 DPSSW 315
Score = 49.6 bits (102), Expect(2) = 8e-010
Identities = 23/55 (41%), Positives = 28/55 (50%)
Frame = -1 / +1
Query: 1521 VSTLSCPGGGSSSKFWTRRPMVMPRMGRARMIPGQLLRPTPKGRYLKSLPLASTC 1357
+S L P G S SK+ TR + R IPG +LRP P G+ KS PL C
Sbjct: 97 MSFLPTPRGSSQSKWHTRFANISSTFAIPRFIPGHILRPAPNGKN*KSFPLKLIC 261
Score = 47.8 bits (98), Expect(2) = 1e-024
Identities = 20/54 (37%), Positives = 26/54 (48%)
Frame = +2 / -1
Query: 1358 HVEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQDKVD 1519
H+ GNDF++LPFG GRR CP LV +F+ P G + D
Sbjct: 260 HINFKGNDFQFLPFGAGRRMCPGMNLGIANVELMLANLVCHFDWELPLGVGRKD 99
Score = 34.5 bits (69), Expect(2) = 8e-010
Identities = 22/55 (40%), Positives = 27/55 (49%)
Frame = -1 / +1
Query: 1278 ALTRILLSAGMSXPPSLASWRFMCGTSSGMAIRSRSVSLITACR*GRLCVSGSVI 1114
ALT + AG P + S CG G RSRS S +TA R L +S S+I
Sbjct: 346 ALTTTRVPAGTMYPSMMQSAMARCGARRGATGRSRSDSFMTALRYVILFMSVSLI 510
>gb|BJ546501.1|BJ546501 BJ546501 K. Sato unpublished cDNA library, cv. Akashinriki vegetative
stage leaves Hordeum vulgare subsp. vulgare cDNA clone
baak42e08 3', mRNA sequence
Length = 594
Score = 86.8 bits (183), Expect(2) = 1e-024
Identities = 32/65 (49%), Positives = 47/65 (72%)
Frame = +2 / -1
Query: 1115 ITEPDTHNLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWYLAN 1294
I+E D +N+ YL+AVIKE+LRLR PLL PH+ + D + GY +PA ++++VNAW +
Sbjct: 513 ISETDMNNMTYLRAVIKESLRLRPVAPLLAPHLAMADCIIDGYIVPAGTRVVVNAWAIGR 334
Query: 1295 NPDSW 1309
+P SW
Sbjct: 333 DPSSW 319
Score = 49.6 bits (102), Expect(2) = 8e-010
Identities = 23/55 (41%), Positives = 28/55 (50%)
Frame = -1 / +2
Query: 1521 VSTLSCPGGGSSSKFWTRRPMVMPRMGRARMIPGQLLRPTPKGRYLKSLPLASTC 1357
+S L P G S SK+ TR + R IPG +LRP P G+ KS PL C
Sbjct: 101 MSFLPTPRGSSQSKWHTRFANISSTFAIPRFIPGHILRPAPNGKN*KSFPLKLIC 265
Score = 47.8 bits (98), Expect(2) = 1e-024
Identities = 20/54 (37%), Positives = 26/54 (48%)
Frame = +2 / -1
Query: 1358 HVEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQDKVD 1519
H+ GNDF++LPFG GRR CP LV +F+ P G + D
Sbjct: 264 HINFKGNDFQFLPFGAGRRMCPGMNLGIANVELMLANLVCHFDWELPLGVGRKD 103
Score = 34.5 bits (69), Expect(2) = 8e-010
Identities = 22/55 (40%), Positives = 27/55 (49%)
Frame = -1 / +2
Query: 1278 ALTRILLSAGMSXPPSLASWRFMCGTSSGMAIRSRSVSLITACR*GRLCVSGSVI 1114
ALT + AG P + S CG G RSRS S +TA R L +S S+I
Sbjct: 350 ALTTTRVPAGTMYPSMMQSAMARCGARRGATGRSRSDSFMTALRYVILFMSVSLI 514
>gb|BJ463386.1|BJ463386 BJ463386 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags27g14 5', mRNA sequence
Length = 528
Score = 99.6 bits (211), Expect(2) = 1e-024
Identities = 41/117 (35%), Positives = 64/117 (54%)
Frame = +2 / +2
Query: 959 DNVLFIVENINVAAIETTLWSIEWAVAELVNHPEIQQKLRQELDTVLGPGHQITEPDTHN 1138
D+ I+ + +AA +T+ S W + EL+ HP + K + E+ G Q+ D
Sbjct: 62 DHAKSILFDTFMAATDTSSISSYWVMTELIRHPRVLHKAQAEVRAAAGGAPQVRISDMPK 241
Query: 1139 LPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWYLANNPDSW 1309
L YL+ V+ ET R+ +LVP + +LGGYDIPA + ++VNAW + +P SW
Sbjct: 242 LKYLRMVLSETFRMHPPATMLVPRETMRPIRLGGYDIPANTMLMVNAWAIGRDPASW 412
Score = 35.0 bits (70), Expect(2) = 1e-024
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +2 / +2
Query: 1361 VEANGNDFRYLPFGVGRRSCP 1423
V+ NG + LPFG GRR CP
Sbjct: 458 VDFNGGHYELLPFGAGRRICP 520
>gb|BF629412.3|BF629412 HVSMEb0012D18f Hordeum vulgare seedling shoot EST library HVcDNA0002
(Dehydration stress) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEb0012D18f, mRNA sequence
Length = 846
Score = 99.6 bits (211), Expect(2) = 1e-024
Identities = 41/117 (35%), Positives = 64/117 (54%)
Frame = +2 / +2
Query: 959 DNVLFIVENINVAAIETTLWSIEWAVAELVNHPEIQQKLRQELDTVLGPGHQITEPDTHN 1138
D+ I+ + +AA +T+ S W + EL+ HP + K + E+ G Q+ D
Sbjct: 143 DHAKSILFDTFMAATDTSSISSYWVMTELIRHPRVLHKAQAEVRAAAGGAPQVRISDMPK 322
Query: 1139 LPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWYLANNPDSW 1309
L YL+ V+ ET R+ +LVP + +LGGYDIPA + ++VNAW + +P SW
Sbjct: 323 LKYLRMVLSETFRMHPPATMLVPRETMRPIRLGGYDIPANTMLMVNAWAIGRDPASW 493
Score = 34.5 bits (69), Expect(2) = 1e-024
Identities = 16/48 (33%), Positives = 19/48 (39%)
Frame = +2 / +2
Query: 1361 VEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPG 1504
V+ NG + LPF GRR CP L+ PP G
Sbjct: 539 VDFNGGHYELLPFXAGRRICPVLAMGVANTEFILXNLLYCLNWAPPSG 682
>gb|BF628981.3|BF628981 HVSMEb0009G20f Hordeum vulgare seedling shoot EST library HVcDNA0002
(Dehydration stress) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEb0009G20f, mRNA sequence
Length = 359
Score = 114 bits (243), Expect = 2e-024
Identities = 49/71 (69%), Positives = 52/71 (73%)
Frame = +2 / +2
Query: 1385 RYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQDKVDTTEKGGQFSLHILKH 1564
R LPFGVGRRSCP RLVQNFELLPP GQ K+DT+EKGGQFSLHILKH
Sbjct: 5 RDLPFGVGRRSCPGIILALPILGITLGRLVQNFELLPPKGQSKLDTSEKGGQFSLHILKH 184
Query: 1565 STIVCKPRTL* 1597
STIV KPR +*
Sbjct: 185 STIVAKPRMI* 217
Score = 113 bits (241), Expect = 3e-024
Identities = 45/67 (67%), Positives = 55/67 (82%)
Frame = -1 / -3
Query: 1590 VLGLHTMVECFKMWRLNWPPFSVVSTLSCPGGGSSSKFWTRRPMVMPRMGRARMIPGQLL 1411
+LG TMVECF++ RLN PPFS VS+L CP GG+SSKF T+RP V+PR+G A++IPGQLL
Sbjct: 210 ILGFATMVECFRICRLNCPPFSDVSSLDCPFGGNSSKFCTKRPNVIPRIGSAKIIPGQLL 31
Query: 1410 RPTPKGR 1390
PTP GR
Sbjct: 30 LPTPNGR 10
>gb|AV921112.1|AV921112 AV921112 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags1a14 3', mRNA sequence
Length = 746
Score = 87.2 bits (184), Expect(2) = 2e-024
Identities = 33/67 (49%), Positives = 48/67 (71%)
Frame = +2 / -1
Query: 1109 HQITEPDTHNLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWYL 1288
H + E D ++L YL+AVIKETLRL M PLLVPH+ + D + GY IP+ ++++VN+ +
Sbjct: 623 HMVIEDDLNHLAYLKAVIKETLRLHMPAPLLVPHLAMADCVINGYTIPSGTRVIVNSRAI 444
Query: 1289 ANNPDSW 1309
A +P SW
Sbjct: 443 ARDPSSW 423
Score = 49.2 bits (101), Expect(2) = 3e-009
Identities = 20/45 (44%), Positives = 26/45 (57%)
Frame = -1 / +1
Query: 1503 PGGGSSSKFWTRRPMVMPRMGRARMIPGQLLRPTPKGRYLKSLPL 1369
PGG SK++TR ++ A+ IPG +LRP P GR K PL
Sbjct: 223 PGGSFQSKWYTRLASMISMAAMAKFIPGHILRPVPNGR*RKPFPL 357
Score = 46.4 bits (95), Expect(2) = 2e-024
Identities = 19/48 (39%), Positives = 23/48 (47%)
Frame = +2 / -1
Query: 1361 VEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPG 1504
++ GN F YLPFG GRR CP LV +F+ PPG
Sbjct: 365 MDYKGNGFLYLPFGTGRRICPGINFAIAAIEIMLANLVYHFDWKLPPG 222
Score = 33.1 bits (66), Expect(2) = 3e-009
Identities = 23/53 (43%), Positives = 27/53 (50%)
Frame = -1 / +1
Query: 1275 LTRILLSAGMSXPPSLASWRFMCGTSSGMAIRSRSVSLITACR*GRLCVSGSV 1117
LT + GM P S GT SG + SRSVSL+TA R* R S S+
Sbjct: 457 LTMTRVPDGMV*PFMTQSAMARWGTRSGAGM*SRSVSLMTAFR*ARWLRSSSM 615
>gb|BU999462.1|BU999462 HI14J11r HI Hordeum vulgare subsp. vulgare cDNA clone HI14J11
5-PRIME, mRNA sequence
Length = 595
Score = 100 bits (213), Expect(2) = 3e-024
Identities = 40/101 (39%), Positives = 60/101 (59%)
Frame = +2 / +2
Query: 1007 TTLWSIEWAVAELVNHPEIQQKLRQELDTVLGPGHQITEPDTHNLPYLQAVIKETLRLRM 1186
T+ +I WA+ EL+ HP + K++ E+ V G ++ D L YL+ V+KETLRL
Sbjct: 32 TSSVTINWAMTELIRHPRVLSKVQGEIRAVGGRSDRMQHDDMPKLQYLRMVVKETLRLHP 211
Query: 1187 AIPLLVPHMNLHDAKLGGYDIPAESKILVNAWYLANNPDSW 1309
LLVP + ++ GYDIPA++KI+VN W + +P W
Sbjct: 212 PATLLVPRETIRRIQVAGYDIPAKTKIIVNTWAIGRDPSVW 334
Score = 32.7 bits (65), Expect(2) = 3e-024
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +2 / +2
Query: 1361 VEANGNDFRYLPFGVGRRSCP 1423
++ +G F LPFG GRR CP
Sbjct: 383 IDFSGAHFELLPFGTGRRVCP 445
Score = 28.1 bits (55), Expect(2) = 0.10
Identities = 18/42 (42%), Positives = 20/42 (47%)
Frame = -1 / -2
Query: 1272 TRILLSAGMSXPPSLASWRFMCGTSSGMAIRSRSVSLITACR 1147
T I + AGMS P + GTSS SRSVS T R
Sbjct: 297 TMIFVLAGMSYPAT*IRRMVSLGTSSVAGGCSRSVSFTTILR 172
Score = 28.1 bits (55), Expect(2) = 0.10
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = -1 / -2
Query: 1425 PGQLLRPTPKGRYLKSLPLAS 1363
PG RP PKG+ K PL S
Sbjct: 447 PGHTRRPVPKGKSSKCAPLKS 385
>gb|AV936726.1|AV936726 AV936726 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal5k12 3', mRNA sequence
Length = 774
Score = 84.5 bits (178), Expect(2) = 5e-024
Identities = 31/65 (47%), Positives = 46/65 (70%)
Frame = +2 / -3
Query: 1115 ITEPDTHNLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWYLAN 1294
I+E D +N+ YL+AVIKE+LRL PLL PH+ + D + GY +PA ++++VNAW +
Sbjct: 595 ISETDMNNMTYLRAVIKESLRLHPVAPLLAPHLAMADCIIDGYIVPAGTRVVVNAWAIGR 416
Query: 1295 NPDSW 1309
+P SW
Sbjct: 415 DPSSW 401
Score = 49.6 bits (102), Expect(2) = 9e-009
Identities = 23/55 (41%), Positives = 28/55 (50%)
Frame = -1 / +3
Query: 1521 VSTLSCPGGGSSSKFWTRRPMVMPRMGRARMIPGQLLRPTPKGRYLKSLPLASTC 1357
+S L P G S SK+ TR + R IPG +LRP P G+ KS PL C
Sbjct: 183 MSFLPTPRGSSQSKWHTRFANISSTFAIPRFIPGHILRPAPNGKN*KSFPLKLIC 347
Score = 47.8 bits (98), Expect(2) = 5e-024
Identities = 20/54 (37%), Positives = 26/54 (48%)
Frame = +2 / -3
Query: 1358 HVEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQDKVD 1519
H+ GNDF++LPFG GRR CP LV +F+ P G + D
Sbjct: 346 HINFKGNDFQFLPFGAGRRMCPGMNLGIANVELMLANLVCHFDWELPLGVGRKD 185
Score = 30.9 bits (61), Expect(2) = 9e-009
Identities = 21/55 (38%), Positives = 26/55 (47%)
Frame = -1 / +3
Query: 1278 ALTRILLSAGMSXPPSLASWRFMCGTSSGMAIRSRSVSLITACR*GRLCVSGSVI 1114
ALT + AG P + S CG G SRS S +TA R L +S S+I
Sbjct: 432 ALTTTRVPAGTMYPSMMQSAMARCGARRGATGCSRSDSFMTALRYVILFMSVSLI 596
>gb|AV936516.1|AV936516 AV936516 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal11k15 3', mRNA sequence
Length = 707
Score = 84.5 bits (178), Expect(2) = 5e-024
Identities = 31/65 (47%), Positives = 46/65 (70%)
Frame = +2 / -2
Query: 1115 ITEPDTHNLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWYLAN 1294
I+E D +N+ YL+AVIKE+LRL PLL PH+ + D + GY +PA ++++VNAW +
Sbjct: 586 ISETDMNNMTYLRAVIKESLRLHPVAPLLAPHLAMADCIIDGYIVPAGTRVVVNAWAIGR 407
Query: 1295 NPDSW 1309
+P SW
Sbjct: 406 DPSSW 392
Score = 49.6 bits (102), Expect(2) = 9e-009
Identities = 23/55 (41%), Positives = 28/55 (50%)
Frame = -1 / +3
Query: 1521 VSTLSCPGGGSSSKFWTRRPMVMPRMGRARMIPGQLLRPTPKGRYLKSLPLASTC 1357
+S L P G S SK+ TR + R IPG +LRP P G+ KS PL C
Sbjct: 174 MSFLPTPRGSSQSKWHTRFANISSTFAIPRFIPGHILRPAPNGKN*KSFPLKLIC 338
Score = 47.8 bits (98), Expect(2) = 5e-024
Identities = 20/54 (37%), Positives = 26/54 (48%)
Frame = +2 / -2
Query: 1358 HVEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQDKVD 1519
H+ GNDF++LPFG GRR CP LV +F+ P G + D
Sbjct: 337 HINFKGNDFQFLPFGAGRRMCPGMNLGIANVELMLANLVCHFDWELPLGVGRKD 176
Score = 30.9 bits (61), Expect(2) = 9e-009
Identities = 21/55 (38%), Positives = 26/55 (47%)
Frame = -1 / +3
Query: 1278 ALTRILLSAGMSXPPSLASWRFMCGTSSGMAIRSRSVSLITACR*GRLCVSGSVI 1114
ALT + AG P + S CG G SRS S +TA R L +S S+I
Sbjct: 423 ALTTTRVPAGTMYPSMMQSAMARCGARRGATGCSRSDSFMTALRYVILFMSVSLI 587
>gb|BJ548975.1|BJ548975 BJ548975 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal40l11 3', mRNA sequence
Length = 696
Score = 84.5 bits (178), Expect(2) = 5e-024
Identities = 31/65 (47%), Positives = 46/65 (70%)
Frame = +2 / -1
Query: 1115 ITEPDTHNLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWYLAN 1294
I+E D +N+ YL+AVIKE+LRL PLL PH+ + D + GY +PA ++++VNAW +
Sbjct: 579 ISETDMNNMTYLRAVIKESLRLHPVAPLLAPHLAMADCIIDGYIVPAGTRVVVNAWAIGR 400
Query: 1295 NPDSW 1309
+P SW
Sbjct: 399 DPSSW 385
Score = 49.6 bits (102), Expect(2) = 9e-009
Identities = 23/55 (41%), Positives = 28/55 (50%)
Frame = -1 / +2
Query: 1521 VSTLSCPGGGSSSKFWTRRPMVMPRMGRARMIPGQLLRPTPKGRYLKSLPLASTC 1357
+S L P G S SK+ TR + R IPG +LRP P G+ KS PL C
Sbjct: 167 MSFLPTPRGSSQSKWHTRFANISSTFAIPRFIPGHILRPAPNGKN*KSFPLKLIC 331
Score = 47.8 bits (98), Expect(2) = 5e-024
Identities = 20/54 (37%), Positives = 26/54 (48%)
Frame = +2 / -1
Query: 1358 HVEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQDKVD 1519
H+ GNDF++LPFG GRR CP LV +F+ P G + D
Sbjct: 330 HINFKGNDFQFLPFGAGRRMCPGMNLGIANVELMLANLVCHFDWELPLGVGRKD 169
Score = 30.9 bits (61), Expect(2) = 9e-009
Identities = 21/55 (38%), Positives = 26/55 (47%)
Frame = -1 / +2
Query: 1278 ALTRILLSAGMSXPPSLASWRFMCGTSSGMAIRSRSVSLITACR*GRLCVSGSVI 1114
ALT + AG P + S CG G SRS S +TA R L +S S+I
Sbjct: 416 ALTTTRVPAGTMYPSMMQSAMARCGARRGATGCSRSDSFMTALRYVILFMSVSLI 580
>gb|BJ548006.1|BJ548006 BJ548006 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal15n22 3', mRNA sequence
Length = 684
Score = 84.5 bits (178), Expect(2) = 5e-024
Identities = 31/65 (47%), Positives = 46/65 (70%)
Frame = +2 / -3
Query: 1115 ITEPDTHNLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWYLAN 1294
I+E D +N+ YL+AVIKE+LRL PLL PH+ + D + GY +PA ++++VNAW +
Sbjct: 565 ISETDMNNMTYLRAVIKESLRLHPVAPLLAPHLAMADCIIDGYIVPAGTRVVVNAWAIGR 386
Query: 1295 NPDSW 1309
+P SW
Sbjct: 385 DPSSW 371
Score = 49.6 bits (102), Expect(2) = 9e-009
Identities = 23/55 (41%), Positives = 28/55 (50%)
Frame = -1 / +3
Query: 1521 VSTLSCPGGGSSSKFWTRRPMVMPRMGRARMIPGQLLRPTPKGRYLKSLPLASTC 1357
+S L P G S SK+ TR + R IPG +LRP P G+ KS PL C
Sbjct: 153 MSFLPTPRGSSQSKWHTRFANISSTFAIPRFIPGHILRPAPNGKN*KSFPLKLIC 317
Score = 47.8 bits (98), Expect(2) = 5e-024
Identities = 20/54 (37%), Positives = 26/54 (48%)
Frame = +2 / -3
Query: 1358 HVEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQDKVD 1519
H+ GNDF++LPFG GRR CP LV +F+ P G + D
Sbjct: 316 HINFKGNDFQFLPFGAGRRMCPGMNLGIANVELMLANLVCHFDWELPLGVGRKD 155
Score = 30.9 bits (61), Expect(2) = 9e-009
Identities = 21/55 (38%), Positives = 26/55 (47%)
Frame = -1 / +3
Query: 1278 ALTRILLSAGMSXPPSLASWRFMCGTSSGMAIRSRSVSLITACR*GRLCVSGSVI 1114
ALT + AG P + S CG G SRS S +TA R L +S S+I
Sbjct: 402 ALTTTRVPAGTMYPSMMQSAMARCGARRGATGCSRSDSFMTALRYVILFMSVSLI 566
>gb|AV936356.1|AV936356 AV936356 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal11a15 3', mRNA sequence
Length = 683
Score = 84.5 bits (178), Expect(2) = 5e-024
Identities = 31/65 (47%), Positives = 46/65 (70%)
Frame = +2 / -2
Query: 1115 ITEPDTHNLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWYLAN 1294
I+E D +N+ YL+AVIKE+LRL PLL PH+ + D + GY +PA ++++VNAW +
Sbjct: 565 ISETDMNNMTYLRAVIKESLRLHPVAPLLAPHLAMADCIIDGYIVPAGTRVVVNAWAIGR 386
Query: 1295 NPDSW 1309
+P SW
Sbjct: 385 DPSSW 371
Score = 49.6 bits (102), Expect(2) = 9e-009
Identities = 23/55 (41%), Positives = 28/55 (50%)
Frame = -1 / +3
Query: 1521 VSTLSCPGGGSSSKFWTRRPMVMPRMGRARMIPGQLLRPTPKGRYLKSLPLASTC 1357
+S L P G S SK+ TR + R IPG +LRP P G+ KS PL C
Sbjct: 153 MSFLPTPRGSSQSKWHTRFANISSTFAIPRFIPGHILRPAPNGKN*KSFPLKLIC 317
Score = 47.8 bits (98), Expect(2) = 5e-024
Identities = 20/54 (37%), Positives = 26/54 (48%)
Frame = +2 / -2
Query: 1358 HVEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQDKVD 1519
H+ GNDF++LPFG GRR CP LV +F+ P G + D
Sbjct: 316 HINFKGNDFQFLPFGAGRRMCPGMNLGIANVELMLANLVCHFDWELPLGVGRKD 155
Score = 30.9 bits (61), Expect(2) = 9e-009
Identities = 21/55 (38%), Positives = 26/55 (47%)
Frame = -1 / +3
Query: 1278 ALTRILLSAGMSXPPSLASWRFMCGTSSGMAIRSRSVSLITACR*GRLCVSGSVI 1114
ALT + AG P + S CG G SRS S +TA R L +S S+I
Sbjct: 402 ALTTTRVPAGTMYPSMMQSAMARCGARRGATGCSRSDSFMTALRYVILFMSVSLI 566
>gb|BJ547960.1|BJ547960 BJ547960 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal12i23 3', mRNA sequence
Length = 669
Score = 84.5 bits (178), Expect(2) = 5e-024
Identities = 31/65 (47%), Positives = 46/65 (70%)
Frame = +2 / -3
Query: 1115 ITEPDTHNLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWYLAN 1294
I+E D +N+ YL+AVIKE+LRL PLL PH+ + D + GY +PA ++++VNAW +
Sbjct: 592 ISETDMNNMTYLRAVIKESLRLHPVAPLLAPHLAMADCIIDGYIVPAGTRVVVNAWAIGR 413
Query: 1295 NPDSW 1309
+P SW
Sbjct: 412 DPSSW 398
Score = 49.6 bits (102), Expect(2) = 9e-009
Identities = 23/55 (41%), Positives = 28/55 (50%)
Frame = -1 / +3
Query: 1521 VSTLSCPGGGSSSKFWTRRPMVMPRMGRARMIPGQLLRPTPKGRYLKSLPLASTC 1357
+S L P G S SK+ TR + R IPG +LRP P G+ KS PL C
Sbjct: 180 MSFLPTPRGSSQSKWHTRFANISSTFAIPRFIPGHILRPAPNGKN*KSFPLKLIC 344
Score = 47.8 bits (98), Expect(2) = 5e-024
Identities = 20/54 (37%), Positives = 26/54 (48%)
Frame = +2 / -3
Query: 1358 HVEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQDKVD 1519
H+ GNDF++LPFG GRR CP LV +F+ P G + D
Sbjct: 343 HINFKGNDFQFLPFGAGRRMCPGMNLGIANVELMLANLVCHFDWELPLGVGRKD 182
Score = 30.9 bits (61), Expect(2) = 9e-009
Identities = 21/55 (38%), Positives = 26/55 (47%)
Frame = -1 / +3
Query: 1278 ALTRILLSAGMSXPPSLASWRFMCGTSSGMAIRSRSVSLITACR*GRLCVSGSVI 1114
ALT + AG P + S CG G SRS S +TA R L +S S+I
Sbjct: 429 ALTTTRVPAGTMYPSMMQSAMARCGARRGATGCSRSDSFMTALRYVILFMSVSLI 593
>gb|BJ548998.1|BJ548998 BJ548998 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal16j19 3', mRNA sequence
Length = 669
Score = 84.5 bits (178), Expect(2) = 5e-024
Identities = 31/65 (47%), Positives = 46/65 (70%)
Frame = +2 / -2
Query: 1115 ITEPDTHNLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWYLAN 1294
I+E D +N+ YL+AVIKE+LRL PLL PH+ + D + GY +PA ++++VNAW +
Sbjct: 587 ISETDMNNMTYLRAVIKESLRLHPVAPLLAPHLAMADCIIDGYIVPAGTRVVVNAWAIGR 408
Query: 1295 NPDSW 1309
+P SW
Sbjct: 407 DPSSW 393
Score = 49.6 bits (102), Expect(2) = 9e-009
Identities = 23/55 (41%), Positives = 28/55 (50%)
Frame = -1 / +1
Query: 1521 VSTLSCPGGGSSSKFWTRRPMVMPRMGRARMIPGQLLRPTPKGRYLKSLPLASTC 1357
+S L P G S SK+ TR + R IPG +LRP P G+ KS PL C
Sbjct: 175 MSFLPTPRGSSQSKWHTRFANISSTFAIPRFIPGHILRPAPNGKN*KSFPLKLIC 339
Score = 47.8 bits (98), Expect(2) = 5e-024
Identities = 20/54 (37%), Positives = 26/54 (48%)
Frame = +2 / -2
Query: 1358 HVEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQDKVD 1519
H+ GNDF++LPFG GRR CP LV +F+ P G + D
Sbjct: 338 HINFKGNDFQFLPFGAGRRMCPGMNLGIANVELMLANLVCHFDWELPLGVGRKD 177
Score = 30.9 bits (61), Expect(2) = 9e-009
Identities = 21/55 (38%), Positives = 26/55 (47%)
Frame = -1 / +1
Query: 1278 ALTRILLSAGMSXPPSLASWRFMCGTSSGMAIRSRSVSLITACR*GRLCVSGSVI 1114
ALT + AG P + S CG G SRS S +TA R L +S S+I
Sbjct: 424 ALTTTRVPAGTMYPSMMQSAMARCGARRGATGCSRSDSFMTALRYVILFMSVSLI 588
>gb|AV936349.1|AV936349 AV936349 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal11a04 3', mRNA sequence
Length = 668
Score = 84.5 bits (178), Expect(2) = 5e-024
Identities = 31/65 (47%), Positives = 46/65 (70%)
Frame = +2 / -1
Query: 1115 ITEPDTHNLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWYLAN 1294
I+E D +N+ YL+AVIKE+LRL PLL PH+ + D + GY +PA ++++VNAW +
Sbjct: 587 ISETDMNNMTYLRAVIKESLRLHPVAPLLAPHLAMADCIIDGYIVPAGTRVVVNAWAIGR 408
Query: 1295 NPDSW 1309
+P SW
Sbjct: 407 DPSSW 393
Score = 49.6 bits (102), Expect(2) = 9e-009
Identities = 23/55 (41%), Positives = 28/55 (50%)
Frame = -1 / +1
Query: 1521 VSTLSCPGGGSSSKFWTRRPMVMPRMGRARMIPGQLLRPTPKGRYLKSLPLASTC 1357
+S L P G S SK+ TR + R IPG +LRP P G+ KS PL C
Sbjct: 175 MSFLPTPRGSSQSKWHTRFANISSTFAIPRFIPGHILRPAPNGKN*KSFPLKLIC 339
Score = 47.8 bits (98), Expect(2) = 5e-024
Identities = 20/54 (37%), Positives = 26/54 (48%)
Frame = +2 / -1
Query: 1358 HVEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQDKVD 1519
H+ GNDF++LPFG GRR CP LV +F+ P G + D
Sbjct: 338 HINFKGNDFQFLPFGAGRRMCPGMNLGIANVELMLANLVCHFDWELPLGVGRKD 177
Score = 30.9 bits (61), Expect(2) = 9e-009
Identities = 21/55 (38%), Positives = 26/55 (47%)
Frame = -1 / +1
Query: 1278 ALTRILLSAGMSXPPSLASWRFMCGTSSGMAIRSRSVSLITACR*GRLCVSGSVI 1114
ALT + AG P + S CG G SRS S +TA R L +S S+I
Sbjct: 424 ALTTTRVPAGTMYPSMMQSAMARCGARRGATGCSRSDSFMTALRYVILFMSVSLI 588
>gb|BJ548386.1|BJ548386 BJ548386 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal24a03 3', mRNA sequence
Length = 645
Score = 84.5 bits (178), Expect(2) = 5e-024
Identities = 31/65 (47%), Positives = 46/65 (70%)
Frame = +2 / -2
Query: 1115 ITEPDTHNLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWYLAN 1294
I+E D +N+ YL+AVIKE+LRL PLL PH+ + D + GY +PA ++++VNAW +
Sbjct: 566 ISETDMNNMTYLRAVIKESLRLHPVAPLLAPHLAMADCIIDGYIVPAGTRVVVNAWAIGR 387
Query: 1295 NPDSW 1309
+P SW
Sbjct: 386 DPSSW 372
Score = 49.6 bits (102), Expect(2) = 9e-009
Identities = 23/55 (41%), Positives = 28/55 (50%)
Frame = -1 / +1
Query: 1521 VSTLSCPGGGSSSKFWTRRPMVMPRMGRARMIPGQLLRPTPKGRYLKSLPLASTC 1357
+S L P G S SK+ TR + R IPG +LRP P G+ KS PL C
Sbjct: 154 MSFLPTPRGSSQSKWHTRFANISSTFAIPRFIPGHILRPAPNGKN*KSFPLKLIC 318
Score = 47.8 bits (98), Expect(2) = 5e-024
Identities = 20/54 (37%), Positives = 26/54 (48%)
Frame = +2 / -2
Query: 1358 HVEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQDKVD 1519
H+ GNDF++LPFG GRR CP LV +F+ P G + D
Sbjct: 317 HINFKGNDFQFLPFGAGRRMCPGMNLGIANVELMLANLVCHFDWELPLGVGRKD 156
Score = 30.9 bits (61), Expect(2) = 9e-009
Identities = 21/55 (38%), Positives = 26/55 (47%)
Frame = -1 / +1
Query: 1278 ALTRILLSAGMSXPPSLASWRFMCGTSSGMAIRSRSVSLITACR*GRLCVSGSVI 1114
ALT + AG P + S CG G SRS S +TA R L +S S+I
Sbjct: 403 ALTTTRVPAGTMYPSMMQSAMARCGARRGATGCSRSDSFMTALRYVILFMSVSLI 567
>gb|AV930421.1|AV930421 AV930421 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp. vulgare
cDNA clone basd22h15 3', mRNA sequence
Length = 640
Score = 84.5 bits (178), Expect(2) = 5e-024
Identities = 31/65 (47%), Positives = 46/65 (70%)
Frame = +2 / -1
Query: 1115 ITEPDTHNLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWYLAN 1294
I+E D +N+ YL+AVIKE+LRL PLL PH+ + D + GY +PA ++++VNAW +
Sbjct: 499 ISETDMNNMTYLRAVIKESLRLHPVAPLLAPHLAMADCIIDGYIVPAGTRVVVNAWAIGR 320
Query: 1295 NPDSW 1309
+P SW
Sbjct: 319 DPSSW 305
Score = 49.6 bits (102), Expect(2) = 9e-009
Identities = 23/55 (41%), Positives = 28/55 (50%)
Frame = -1 / +3
Query: 1521 VSTLSCPGGGSSSKFWTRRPMVMPRMGRARMIPGQLLRPTPKGRYLKSLPLASTC 1357
+S L P G S SK+ TR + R IPG +LRP P G+ KS PL C
Sbjct: 87 MSFLPTPRGSSQSKWHTRFANISSTFAIPRFIPGHILRPAPNGKN*KSFPLKLIC 251
Score = 47.8 bits (98), Expect(2) = 5e-024
Identities = 20/54 (37%), Positives = 26/54 (48%)
Frame = +2 / -1
Query: 1358 HVEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQDKVD 1519
H+ GNDF++LPFG GRR CP LV +F+ P G + D
Sbjct: 250 HINFKGNDFQFLPFGAGRRMCPGMNLGIANVELMLANLVCHFDWELPLGVGRKD 89
Score = 30.9 bits (61), Expect(2) = 9e-009
Identities = 21/55 (38%), Positives = 26/55 (47%)
Frame = -1 / +3
Query: 1278 ALTRILLSAGMSXPPSLASWRFMCGTSSGMAIRSRSVSLITACR*GRLCVSGSVI 1114
ALT + AG P + S CG G SRS S +TA R L +S S+I
Sbjct: 336 ALTTTRVPAGTMYPSMMQSAMARCGARRGATGCSRSDSFMTALRYVILFMSVSLI 500
>gb|AV935198.1|AV935198 AV935198 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal3e02 3', mRNA sequence
Length = 597
Score = 84.5 bits (178), Expect(2) = 5e-024
Identities = 31/65 (47%), Positives = 46/65 (70%)
Frame = +2 / -3
Query: 1115 ITEPDTHNLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWYLAN 1294
I+E D +N+ YL+AVIKE+LRL PLL PH+ + D + GY +PA ++++VNAW +
Sbjct: 586 ISETDMNNMTYLRAVIKESLRLHPVAPLLAPHLAMADCIIDGYIVPAGTRVVVNAWAIGR 407
Query: 1295 NPDSW 1309
+P SW
Sbjct: 406 DPSSW 392
Score = 49.6 bits (102), Expect(2) = 1e-008
Identities = 23/55 (41%), Positives = 28/55 (50%)
Frame = -1 / +3
Query: 1521 VSTLSCPGGGSSSKFWTRRPMVMPRMGRARMIPGQLLRPTPKGRYLKSLPLASTC 1357
+S L P G S SK+ TR + R IPG +LRP P G+ KS PL C
Sbjct: 174 MSFLPTPRGSSQSKWHTRFANISSTFAIPRFIPGHILRPAPNGKN*KSFPLKLIC 338
Score = 47.8 bits (98), Expect(2) = 5e-024
Identities = 20/54 (37%), Positives = 26/54 (48%)
Frame = +2 / -3
Query: 1358 HVEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQDKVD 1519
H+ GNDF++LPFG GRR CP LV +F+ P G + D
Sbjct: 337 HINFKGNDFQFLPFGAGRRMCPGMNLGIANVELMLANLVCHFDWELPLGVGRKD 176
Score = 30.9 bits (61), Expect(2) = 1e-008
Identities = 21/55 (38%), Positives = 26/55 (47%)
Frame = -1 / +3
Query: 1278 ALTRILLSAGMSXPPSLASWRFMCGTSSGMAIRSRSVSLITACR*GRLCVSGSVI 1114
ALT + AG P + S CG G SRS S +TA R L +S S+I
Sbjct: 423 ALTTTRVPAGTMYPSMMQSAMARCGARRGATGCSRSDSFMTALRYVILFMSVSLI 587
>gb|BJ544646.1|BJ544646 BJ544646 K. Sato unpublished cDNA library, cv. Akashinriki vegetative
stage leaves Hordeum vulgare subsp. vulgare cDNA clone
baak33l17 5', mRNA sequence
Length = 689
Score = 86.8 bits (183), Expect(2) = 9e-024
Identities = 32/65 (49%), Positives = 47/65 (72%)
Frame = +2 / +2
Query: 1115 ITEPDTHNLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWYLAN 1294
I+E D +N+ YL+AVIKE+LRLR PLL PH+ + D + GY +PA ++++VNAW +
Sbjct: 332 ISETDMNNMTYLRAVIKESLRLRPVAPLLAPHLAMADCIIDGYIVPAGTRVVVNAWAIGR 511
Query: 1295 NPDSW 1309
+P SW
Sbjct: 512 DPSSW 526
Score = 44.6 bits (91), Expect(2) = 9e-024
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = +2 / +2
Query: 1358 HVEANGNDFRYLPFGVGRRSCP 1423
H+ GNDF++LPFG GRR CP
Sbjct: 581 HINFKGNDFQFLPFGAGRRMCP 646
Score = 36.8 bits (74), Expect(2) = 4e-006
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = -1 / -3
Query: 1434 RMIPGQLLRPTPKGRYLKSLPLASTC 1357
R IPG +LRP P G+ KS PL C
Sbjct: 657 RFIPGHILRPAPNGKN*KSFPLKLIC 580
Score = 34.5 bits (69), Expect(2) = 4e-006
Identities = 22/55 (40%), Positives = 27/55 (49%)
Frame = -1 / -3
Query: 1278 ALTRILLSAGMSXPPSLASWRFMCGTSSGMAIRSRSVSLITACR*GRLCVSGSVI 1114
ALT + AG P + S CG G RSRS S +TA R L +S S+I
Sbjct: 495 ALTTTRVPAGTMYPSMMQSAMARCGARRGATGRSRSDSFMTALRYVILFMSVSLI 331
>gb|BJ545019.1|BJ545019 BJ545019 K. Sato unpublished cDNA library, cv. Akashinriki vegetative
stage leaves Hordeum vulgare subsp. vulgare cDNA clone
baak42e08 5', mRNA sequence
Length = 688
Score = 86.8 bits (183), Expect(2) = 9e-024
Identities = 32/65 (49%), Positives = 47/65 (72%)
Frame = +2 / +2
Query: 1115 ITEPDTHNLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWYLAN 1294
I+E D +N+ YL+AVIKE+LRLR PLL PH+ + D + GY +PA ++++VNAW +
Sbjct: 362 ISETDMNNMTYLRAVIKESLRLRPVAPLLAPHLAMADCIIDGYIVPAGTRVVVNAWAIGR 541
Query: 1295 NPDSW 1309
+P SW
Sbjct: 542 DPSSW 556
Score = 44.6 bits (91), Expect(2) = 9e-024
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = +2 / +2
Query: 1358 HVEANGNDFRYLPFGVGRRSCP 1423
H+ GNDF++LPFG GRR CP
Sbjct: 611 HINFKGNDFQFLPFGAGRRMCP 676
Score = 36.8 bits (74), Expect(2) = 4e-006
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = -1 / -2
Query: 1434 RMIPGQLLRPTPKGRYLKSLPLASTC 1357
R IPG +LRP P G+ KS PL C
Sbjct: 687 RFIPGHILRPAPNGKN*KSFPLKLIC 610
Score = 34.5 bits (69), Expect(2) = 4e-006
Identities = 22/55 (40%), Positives = 27/55 (49%)
Frame = -1 / -2
Query: 1278 ALTRILLSAGMSXPPSLASWRFMCGTSSGMAIRSRSVSLITACR*GRLCVSGSVI 1114
ALT + AG P + S CG G RSRS S +TA R L +S S+I
Sbjct: 525 ALTTTRVPAGTMYPSMMQSAMARCGARRGATGRSRSDSFMTALRYVILFMSVSLI 361
>gb|BE215637.1|BE215637 HV_CEb0007H18f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0007H18f, mRNA sequence
Length = 531
Score = 95.0 bits (201), Expect(2) = 1e-023
Identities = 39/105 (37%), Positives = 62/105 (59%)
Frame = +2 / +3
Query: 995 AAIETTLWSIEWAVAELVNHPEIQQKLRQELDTVLGPGHQITEPDTHNLPYLQAVIKETL 1174
A ET+ ++ WA++EL+ +P K + E+ L ++TE D +L Y++ VIKETL
Sbjct: 72 AGSETSATTLAWAMSELMRNPGAMAKAQAEVRNNLQGKPRVTEDDLADLKYMRLVIKETL 251
Query: 1175 RLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWYLANNPDSW 1309
RL ++PLL+P K+ GYD+P + + VNAW + +P W
Sbjct: 252 RLHTSVPLLLPREPTEACKVLGYDVPKGATVFVNAWAICRDPKHW 386
Score = 36.8 bits (74), Expect(2) = 1e-004
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = -1 / -3
Query: 1425 PGQLLRPTPKGRYLKSLPLAST 1360
PGQ+LRP P G Y K +PL ST
Sbjct: 496 PGQILRPAPNGVYSKLVPLKST 431
Score = 35.9 bits (72), Expect(2) = 1e-023
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +2 / +3
Query: 1361 VEANGNDFRYLPFGVGRRSCP 1423
V+ G +F Y PFG GRR CP
Sbjct: 432 VDFKGTNFEYTPFGAGRRICP 494
Score = 29.9 bits (59), Expect(2) = 1e-004
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = -1 / -3
Query: 1278 ALTRILLSAGMSXPPSLASWRFMCGTSSGMAIRSRSVSLIT 1156
A T + G S P +L + G+SSG + SRSVSL+T
Sbjct: 355 AFTNTVAPLGTSYPRTLHASVGSRGSSSGTDVCSRSVSLMT 233
>gb|BF628635.2|BF628635 HVSMEb0006N15f Hordeum vulgare seedling shoot EST library HVcDNA0002
(Dehydration stress) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEb0006N15f, mRNA sequence
Length = 710
Score = 90.4 bits (191), Expect(2) = 2e-023
Identities = 34/67 (50%), Positives = 50/67 (74%)
Frame = +2 / +2
Query: 1109 HQITEPDTHNLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWYL 1288
H +TE D ++L YL+AVIKETLRL M PLLVPH+ + D + GY IP+ ++++VN+ +
Sbjct: 314 HMVTEDDLNHLAYLKAVIKETLRLHMPAPLLVPHLAMADCVINGYTIPSGTRVIVNSRAI 493
Query: 1289 ANNPDSW 1309
A +P+SW
Sbjct: 494 ARDPNSW 514
Score = 43.2 bits (88), Expect(2) = 2e-008
Identities = 19/43 (44%), Positives = 24/43 (55%)
Frame = -1 / -3
Query: 1497 GGSSSKFWTRRPMVMPRMGRARMIPGQLLRPTPKGRYLKSLPL 1369
G SK++TR ++ AR IPG +LRP P GR K PL
Sbjct: 708 GSFQSKWYTRLVSMISMAPMARFIPGHILRPVPNGR*RKPFPL 580
Score = 40.0 bits (81), Expect(2) = 2e-023
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = +2 / +2
Query: 1361 VEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFE 1486
++ GN F YLPFG GRR CP LV +F+
Sbjct: 572 MDYKGNGFLYLPFGTGRRICPGINLAIGAIEIMLTNLVYHFD 697
Score = 35.9 bits (72), Expect(2) = 2e-008
Identities = 25/53 (47%), Positives = 27/53 (50%)
Frame = -1 / -3
Query: 1275 LTRILLSAGMSXPPSLASWRFMCGTSSGMAIRSRSVSLITACR*GRLCVSGSV 1117
LT + GM P S GT SG + SRSVSLITA R* R S SV
Sbjct: 480 LTMTRVPDGMV*PFMTQSAMARWGTRSGAGM*SRSVSLITAFR*ARWLRSSSV 322
>gb|BJ453643.1|BJ453643 BJ453643 K. Sato unpublished cDNA library, cv. Akashinriki vegetative
stage leaves Hordeum vulgare subsp. vulgare cDNA clone
baak43p03 5', mRNA sequence
Length = 589
Score = 86.3 bits (182), Expect(2) = 4e-023
Identities = 33/73 (45%), Positives = 49/73 (67%)
Frame = +2 / +2
Query: 1091 TVLGPGHQITEPDTHNLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKIL 1270
T+ +TE D + YL+AVIKETLRL M PLLVPH+++ + + GY IP+ +++
Sbjct: 53 TITKGKEMVTEADLDSXAYLKAVIKETLRLHMPGPLLVPHLSMAECNVNGYIIPSGIRVI 232
Query: 1271 VNAWYLANNPDSW 1309
+N+W LA +P SW
Sbjct: 233 INSWALARDPGSW 271
Score = 46.0 bits (94), Expect(2) = 2e-009
Identities = 18/43 (41%), Positives = 27/43 (62%)
Frame = -1 / -2
Query: 1497 GGSSSKFWTRRPMVMPRMGRARMIPGQLLRPTPKGRYLKSLPL 1369
G K++ R ++ + A++IPGQ+LRP P G+Y KS PL
Sbjct: 465 GSFQLKWYMRFASMISMVAIAKLIPGQILRPVPNGKYEKSFPL 337
Score = 42.8 bits (87), Expect(2) = 4e-023
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = +2 / +2
Query: 1361 VEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNF 1483
++ GNDF YLPFG GRR CP L+ +F
Sbjct: 329 MDYKGNDFSYLPFGTGRRICPGINFAIATIEIMLANLIYHF 451
Score = 36.8 bits (74), Expect(2) = 2e-009
Identities = 26/58 (44%), Positives = 29/58 (50%)
Frame = -1 / -2
Query: 1290 ARYQALTRILLSAGMSXPPSLASWRFMCGTSSGMAIRSRSVSLITACR*GRLCVSGSV 1117
AR Q L + G+ P +L S GT SG I S SVSLITA R L S SV
Sbjct: 252 ARAQLLMMTRIPDGIMYPFTLHSAMERWGTRSGPGIWSLSVSLITAFRYAXLSRSASV 79
>gb|BJ452936.1|BJ452936 BJ452936 K. Sato unpublished cDNA library, cv. Akashinriki vegetative
stage leaves Hordeum vulgare subsp. vulgare cDNA clone
baak40p23 5', mRNA sequence
Length = 502
Score = 86.3 bits (182), Expect(2) = 4e-023
Identities = 33/73 (45%), Positives = 49/73 (67%)
Frame = +2 / +1
Query: 1091 TVLGPGHQITEPDTHNLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKIL 1270
T+ +TE D +L YL+A IKETLRL M PLLVPH+++ + + GY IP+ +++
Sbjct: 10 TITKGKEMVTEADLDSLAYLKAXIKETLRLHMPGPLLVPHLSMAECNVNGYIIPSGIRVI 189
Query: 1271 VNAWYLANNPDSW 1309
+N+W LA +P SW
Sbjct: 190 INSWALARDPGSW 228
Score = 46.0 bits (94), Expect = 7e-004
Identities = 18/43 (41%), Positives = 27/43 (62%)
Frame = -1 / -3
Query: 1497 GGSSSKFWTRRPMVMPRMGRARMIPGQLLRPTPKGRYLKSLPL 1369
G K++ R ++ + A++IPGQ+LRP P G+Y KS PL
Sbjct: 422 GSFQLKWYMRFASMISMVAIAKLIPGQILRPVPNGKYEKSFPL 294
Score = 42.8 bits (87), Expect(2) = 4e-023
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = +2 / +1
Query: 1361 VEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNF 1483
++ GNDF YLPFG GRR CP L+ +F
Sbjct: 286 MDYKGNDFSYLPFGTGRRICPGINFAIATIEIMLANLIYHF 408
>gb|BJ466861.1|BJ466861 BJ466861 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags34j09 3', mRNA sequence
Length = 719
Score = 83.5 bits (176), Expect(2) = 6e-023
Identities = 29/65 (44%), Positives = 46/65 (70%)
Frame = +2 / -3
Query: 1115 ITEPDTHNLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWYLAN 1294
+T+ D H LPYL+AVIKETLRL M PL+VPH+++ + + GY IP+ ++ +N + +
Sbjct: 567 VTQDDLHGLPYLKAVIKETLRLHMPGPLMVPHLSMDECIINGYTIPSGTRTFINTYAIQR 388
Query: 1295 NPDSW 1309
+P +W
Sbjct: 387 DPSNW 373
Score = 46.4 bits (95), Expect(2) = 7e-009
Identities = 19/44 (43%), Positives = 27/44 (61%)
Frame = -1 / +2
Query: 1500 GGGSSSKFWTRRPMVMPRMGRARMIPGQLLRPTPKGRYLKSLPL 1369
GG SK++ R + + A++IPG +LRP P G+Y KS PL
Sbjct: 176 GGSFQSKWYMRFVSMS*MVAVAKLIPGHILRPDPNGKYWKSFPL 307
Score = 45.1 bits (92), Expect(2) = 6e-023
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = +2 / -3
Query: 1361 VEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQDK 1513
++ GNDF+Y PFG GRR CP L+ +F+ PP ++
Sbjct: 315 MDYKGNDFQYFPFGSGRRICPGINFATATIQLMLTNLMYHFDWKLPPESEE 163
Score = 34.5 bits (69), Expect(2) = 7e-009
Identities = 21/46 (45%), Positives = 27/46 (58%)
Frame = -1 / +2
Query: 1275 LTRILLSAGMSXPPSLASWRFMCGTSSGMAIRSRSVSLITACR*GR 1138
L ++ + G+ P + S GT SG + SRSVSLITA R*GR
Sbjct: 407 LMKVRVPDGIV*PFMMHSSMERWGTMSGPGM*SRSVSLITAFR*GR 544
>gb|AV919647.1|AV919647 AV919647 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags6p16 3', mRNA sequence
Length = 703
Score = 83.5 bits (176), Expect(2) = 6e-023
Identities = 29/65 (44%), Positives = 46/65 (70%)
Frame = +2 / -2
Query: 1115 ITEPDTHNLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWYLAN 1294
+T+ D H LPYL+AVIKETLRL M PL+VPH+++ + + GY IP+ ++ +N + +
Sbjct: 585 VTQDDLHGLPYLKAVIKETLRLHMPGPLMVPHLSMDECIINGYTIPSGTRTFINTYAIQR 406
Query: 1295 NPDSW 1309
+P +W
Sbjct: 405 DPSNW 391
Score = 46.4 bits (95), Expect(2) = 7e-009
Identities = 19/44 (43%), Positives = 27/44 (61%)
Frame = -1 / +2
Query: 1500 GGGSSSKFWTRRPMVMPRMGRARMIPGQLLRPTPKGRYLKSLPL 1369
GG SK++ R + + A++IPG +LRP P G+Y KS PL
Sbjct: 194 GGSFQSKWYMRFVSMS*MVAVAKLIPGHILRPDPNGKYWKSFPL 325
Score = 45.1 bits (92), Expect(2) = 6e-023
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = +2 / -2
Query: 1361 VEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQDK 1513
++ GNDF+Y PFG GRR CP L+ +F+ PP ++
Sbjct: 333 MDYKGNDFQYFPFGSGRRICPGINFATATIQLMLTNLMYHFDWKLPPESEE 181
Score = 34.5 bits (69), Expect(2) = 7e-009
Identities = 21/46 (45%), Positives = 27/46 (58%)
Frame = -1 / +2
Query: 1275 LTRILLSAGMSXPPSLASWRFMCGTSSGMAIRSRSVSLITACR*GR 1138
L ++ + G+ P + S GT SG + SRSVSLITA R*GR
Sbjct: 425 LMKVRVPDGIV*PFMMHSSMERWGTMSGPGM*SRSVSLITAFR*GR 562
>gb|AV913934.1|AV913934 AV913934 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags23m23 5', mRNA sequence
Length = 660
Score = 83.5 bits (176), Expect(2) = 6e-023
Identities = 29/65 (44%), Positives = 46/65 (70%)
Frame = +2 / +2
Query: 1115 ITEPDTHNLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWYLAN 1294
+T+ D H LPYL+AVIKETLRL M PL+VPH+++ + + GY IP+ ++ +N + +
Sbjct: 134 VTQDDLHGLPYLKAVIKETLRLHMPGPLMVPHLSMDECIINGYTIPSGTRTFINTYAIQR 313
Query: 1295 NPDSW 1309
+P +W
Sbjct: 314 DPSNW 328
Score = 46.4 bits (95), Expect(2) = 7e-009
Identities = 19/44 (43%), Positives = 27/44 (61%)
Frame = -1 / -1
Query: 1500 GGGSSSKFWTRRPMVMPRMGRARMIPGQLLRPTPKGRYLKSLPL 1369
GG SK++ R + + A++IPG +LRP P G+Y KS PL
Sbjct: 525 GGSFQSKWYMRFVSMS*MVAVAKLIPGHILRPDPNGKYWKSFPL 394
Score = 45.1 bits (92), Expect(2) = 6e-023
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = +2 / +2
Query: 1361 VEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQDK 1513
++ GNDF+Y PFG GRR CP L+ +F+ PP ++
Sbjct: 386 MDYKGNDFQYFPFGSGRRICPGINFATATIQLMLTNLMYHFDWKLPPESEE 538
Score = 34.5 bits (69), Expect(2) = 7e-009
Identities = 21/46 (45%), Positives = 27/46 (58%)
Frame = -1 / -1
Query: 1275 LTRILLSAGMSXPPSLASWRFMCGTSSGMAIRSRSVSLITACR*GR 1138
L ++ + G+ P + S GT SG + SRSVSLITA R*GR
Sbjct: 294 LMKVRVPDGIV*PFMMHSSMERWGTMSGPGM*SRSVSLITAFR*GR 157
>gb|AV918301.1|AV918301 AV918301 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags20j07 3', mRNA sequence
Length = 660
Score = 83.5 bits (176), Expect(2) = 6e-023
Identities = 29/65 (44%), Positives = 46/65 (70%)
Frame = +2 / -3
Query: 1115 ITEPDTHNLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWYLAN 1294
+T+ D H LPYL+AVIKETLRL M PL+VPH+++ + + GY IP+ ++ +N + +
Sbjct: 568 VTQDDLHGLPYLKAVIKETLRLHMPGPLMVPHLSMDECIINGYTIPSGTRTFINTYAIQR 389
Query: 1295 NPDSW 1309
+P +W
Sbjct: 388 DPSNW 374
Score = 46.4 bits (95), Expect(2) = 7e-009
Identities = 19/44 (43%), Positives = 27/44 (61%)
Frame = -1 / +3
Query: 1500 GGGSSSKFWTRRPMVMPRMGRARMIPGQLLRPTPKGRYLKSLPL 1369
GG SK++ R + + A++IPG +LRP P G+Y KS PL
Sbjct: 177 GGSFQSKWYMRFVSMS*MVAVAKLIPGHILRPDPNGKYWKSFPL 308
Score = 45.1 bits (92), Expect(2) = 6e-023
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = +2 / -3
Query: 1361 VEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQDK 1513
++ GNDF+Y PFG GRR CP L+ +F+ PP ++
Sbjct: 316 MDYKGNDFQYFPFGSGRRICPGINFATATIQLMLTNLMYHFDWKLPPESEE 164
Score = 34.5 bits (69), Expect(2) = 7e-009
Identities = 21/46 (45%), Positives = 27/46 (58%)
Frame = -1 / +3
Query: 1275 LTRILLSAGMSXPPSLASWRFMCGTSSGMAIRSRSVSLITACR*GR 1138
L ++ + G+ P + S GT SG + SRSVSLITA R*GR
Sbjct: 408 LMKVRVPDGIV*PFMMHSSMERWGTMSGPGM*SRSVSLITAFR*GR 545
>gb|AV918176.1|AV918176 AV918176 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags20c01 3', mRNA sequence
Length = 655
Score = 83.5 bits (176), Expect(2) = 6e-023
Identities = 29/65 (44%), Positives = 46/65 (70%)
Frame = +2 / -2
Query: 1115 ITEPDTHNLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWYLAN 1294
+T+ D H LPYL+AVIKETLRL M PL+VPH+++ + + GY IP+ ++ +N + +
Sbjct: 603 VTQDDLHGLPYLKAVIKETLRLHMPGPLMVPHLSMDECIINGYTIPSGTRTFINTYAIQR 424
Query: 1295 NPDSW 1309
+P +W
Sbjct: 423 DPSNW 409
Score = 46.4 bits (95), Expect(2) = 7e-009
Identities = 19/44 (43%), Positives = 27/44 (61%)
Frame = -1 / +2
Query: 1500 GGGSSSKFWTRRPMVMPRMGRARMIPGQLLRPTPKGRYLKSLPL 1369
GG SK++ R + + A++IPG +LRP P G+Y KS PL
Sbjct: 212 GGSFQSKWYMRFVSMS*MVAVAKLIPGHILRPDPNGKYWKSFPL 343
Score = 45.1 bits (92), Expect(2) = 6e-023
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = +2 / -2
Query: 1361 VEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQDK 1513
++ GNDF+Y PFG GRR CP L+ +F+ PP ++
Sbjct: 351 MDYKGNDFQYFPFGSGRRICPGINFATATIQLMLTNLMYHFDWKLPPESEE 199
Score = 34.5 bits (69), Expect(2) = 7e-009
Identities = 21/46 (45%), Positives = 27/46 (58%)
Frame = -1 / +2
Query: 1275 LTRILLSAGMSXPPSLASWRFMCGTSSGMAIRSRSVSLITACR*GR 1138
L ++ + G+ P + S GT SG + SRSVSLITA R*GR
Sbjct: 443 LMKVRVPDGIV*PFMMHSSMERWGTMSGPGM*SRSVSLITAFR*GR 580
>gb|AV922405.1|AV922405 AV922405 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags18b09 3', mRNA sequence
Length = 618
Score = 83.5 bits (176), Expect(2) = 6e-023
Identities = 29/65 (44%), Positives = 46/65 (70%)
Frame = +2 / -3
Query: 1115 ITEPDTHNLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWYLAN 1294
+T+ D H LPYL+AVIKETLRL M PL+VPH+++ + + GY IP+ ++ +N + +
Sbjct: 604 VTQDDLHGLPYLKAVIKETLRLHMPGPLMVPHLSMDECIINGYTIPSGTRTFINTYAIQR 425
Query: 1295 NPDSW 1309
+P +W
Sbjct: 424 DPSNW 410
Score = 46.4 bits (95), Expect(2) = 7e-009
Identities = 19/44 (43%), Positives = 27/44 (61%)
Frame = -1 / +3
Query: 1500 GGGSSSKFWTRRPMVMPRMGRARMIPGQLLRPTPKGRYLKSLPL 1369
GG SK++ R + + A++IPG +LRP P G+Y KS PL
Sbjct: 213 GGSFQSKWYMRFVSMS*MVAVAKLIPGHILRPDPNGKYWKSFPL 344
Score = 45.1 bits (92), Expect(2) = 6e-023
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = +2 / -3
Query: 1361 VEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQDK 1513
++ GNDF+Y PFG GRR CP L+ +F+ PP ++
Sbjct: 352 MDYKGNDFQYFPFGSGRRICPGINFATATIQLMLTNLMYHFDWKLPPESEE 200
Score = 34.5 bits (69), Expect(2) = 7e-009
Identities = 21/46 (45%), Positives = 27/46 (58%)
Frame = -1 / +3
Query: 1275 LTRILLSAGMSXPPSLASWRFMCGTSSGMAIRSRSVSLITACR*GR 1138
L ++ + G+ P + S GT SG + SRSVSLITA R*GR
Sbjct: 444 LMKVRVPDGIV*PFMMHSSMERWGTMSGPGM*SRSVSLITAFR*GR 581
>gb|CA030582.1|CA030582 HX07H18r HX Hordeum vulgare subsp. vulgare cDNA clone HX07H18
5-PRIME, mRNA sequence
Length = 616
Score = 74.4 bits (156), Expect(3) = 1e-022
Identities = 36/106 (33%), Positives = 59/106 (55%)
Frame = +2 / +2
Query: 884 ATDSNGLKCAIDHILEAQQKGEINEDNVLFIVENINVAAIETTLWSIEWAVAELVNHPEI 1063
A S G+K D +L Q ++ + +++ ++ + +T +EW +A LV H ++
Sbjct: 47 AAASAGVKDFTDVLLSLQGGDKLADADMIAVLWEMVFRGTDTVAVLMEWVLARLVLHRDV 226
Query: 1064 QQKLRQELDTVLGPGHQITEPDTHNLPYLQAVIKETLRLRMAIPLL 1201
Q ++ +ELD V+G + E D +L YL AVIKETLR+ PLL
Sbjct: 227 QARVHEELDRVVGRDRAVDESDAASLAYLHAVIKETLRVHPPGPLL 364
Score = 43.2 bits (88), Expect(2) = 6e-007
Identities = 29/67 (43%), Positives = 36/67 (53%)
Frame = -1 / -2
Query: 1200 SSGMAIRSRSVSLITACR*GRLCVSGSVIWWPGPSTVSSSCRSFCWISGWFTSSATAHSI 1021
SSG +RSVSL+TA R* R S S P+T SSS + S TS A+ HSI
Sbjct: 363 SSGPGGCTRSVSLMTAWR*AREAASDSSTARSRPTTRSSSSCTRACTSRCSTSRASTHSI 184
Query: 1020 DHSVVSI 1000
+ VS+
Sbjct: 183 STATVSV 163
Score = 35.4 bits (71), Expect(3) = 1e-022
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +2 / +2
Query: 1373 GNDFRYLPFGVGRRSCP 1423
G+D R PFG GRRSCP
Sbjct: 545 GSDLRLAPFGAGRRSCP 595
Score = 35.4 bits (71), Expect(3) = 1e-022
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +2 / +2
Query: 1223 DAKLGGYDIPAESKILVNAWYLANNPDSW 1309
D ++ G+ IPA + +VN W + ++PD W
Sbjct: 389 DVRVDGFLIPAGTTAMVNMWAITHDPDVW 475
Score = 35.0 bits (70), Expect = 1.3
Identities = 19/59 (32%), Positives = 23/59 (38%)
Frame = -3 / -1
Query: 1201 QQRDGHPQPQRLLDHRLQVGEXXXXXXXXXXXRPEHRVXXXXXXXXXLRVVHQLSDRPL 1025
+QR PQRLLD ++VGE P H V + V HQ PL
Sbjct: 364 EQRAWRVHPQRLLDDGVEVGEGGRIGLVDGAVAPHHAVKLLVHPRLHVPVQHQPGQHPL 188
Score = 34.5 bits (69), Expect(2) = 6e-007
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -1 / -2
Query: 1437 ARMIPGQLLRPTPKGRYLKSLPLAST 1360
AR+ PGQLLRP P G +S P+ +
Sbjct: 609 ARLFPGQLLRPAPNGARRRSDPITES 532
>gb|AL500947.1|AL500947 AL500947 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW02H20u 3', mRNA sequence
Length = 393
Score = 107 bits (228), Expect = 2e-022
Identities = 42/106 (39%), Positives = 67/106 (63%)
Frame = +2 / +1
Query: 983 NINVAAIETTLWSIEWAVAELVNHPEIQQKLRQELDTVLGPGHQITEPDTHNLPYLQAVI 1162
N+ A ETT + EWA++ L+NHP +K + E+D +G +T D L YLQ ++
Sbjct: 70 NLFGAGTETTSSTTEWAMSLLLNHPAALRKAQAEIDVAVGTSRLVTADDVPRLAYLQCIV 249
Query: 1163 KETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWYLANNP 1300
ETLRL A P+L+PH + D K+GGY++P+ + ++VNA+ + +P
Sbjct: 250 SETLRLYPAAPMLLPHQSSADCKVGGYNVPSGTMLMVNAYAIHRDP 387
Score = 67.5 bits (141), Expect = 2e-010
Identities = 39/100 (39%), Positives = 52/100 (52%)
Frame = -1 / -2
Query: 1278 ALTRILLSAGMSXPPSLASWRFMCGTSSGMAIRSRSVSLITACR*GRLCVSGSVIWWPGP 1099
A T ++ G PP+L S CG+S G A SRSVSL CR* S +V P
Sbjct: 365 AFTISIVPLGTL*PPTLQSADDWCGSSIGAAGYSRSVSLTMHCR*ASRGTSSAVTSREVP 186
Query: 1098 STVSSSCRSFCWISGWFTSSATAHSIDHSVVSIAATLMFS 979
+ S S +F +GWF+S+ AHS+ VVS+ A F+
Sbjct: 185 TATSISACAFLSAAGWFSSNDMAHSVVDDVVSVPAPNKFA 66
Score = 35.0 bits (70), Expect = 1.3
Identities = 19/36 (52%), Positives = 19/36 (52%)
Frame = -3 / -1
Query: 1246 VVXAELGVVEVHVRHQQRDGHPQPQRLLDHRLQVGE 1139
VV A L V VR Q R QPQRL LQVGE
Sbjct: 333 VVAANLAVRRRLVRQQHRRRRVQPQRLAHDALQVGE 226
>gb|BJ546669.1|BJ546669 BJ546669 K. Sato unpublished cDNA library, cv. Akashinriki vegetative
stage leaves Hordeum vulgare subsp. vulgare cDNA clone
baak45m01 3', mRNA sequence
Length = 730
Score = 85.4 bits (180), Expect(2) = 3e-022
Identities = 36/86 (41%), Positives = 51/86 (59%)
Frame = +2 / -2
Query: 1052 HPEIQQKLRQELDTVLGPGHQITEPDTHNLPYLQAVIKETLRLRMAIPLLVPHMNLHDAK 1231
+P + K + E+ L ++TE D NL YL+ VIKET+RL A PLL+P + K
Sbjct: 726 YPNVMLKAQAEVRNNLQGKSKVTEDDLANLKYLRLVIKETMRLHPAAPLLLPREAMEACK 547
Query: 1232 LGGYDIPAESKILVNAWYLANNPDSW 1309
+ GYDIP + +LVNAW + +P W
Sbjct: 546 ILGYDIPEGTTVLVNAWAIGRDPKYW 469
Score = 42.3 bits (86), Expect(2) = 2e-007
Identities = 19/48 (39%), Positives = 25/48 (52%)
Frame = -1 / +2
Query: 1503 PGGGSSSKFWTRRPMVMPRMGRARMIPGQLLRPTPKGRYLKSLPLAST 1360
P G S SK+ + + A +IPG +L P P G Y K +PL ST
Sbjct: 281 PLGSSQSKW*RSEASTISMLACANVIPGHILLPAPNGMYSKFVPLKST 424
Score = 40.9 bits (83), Expect(2) = 3e-022
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = +2 / -2
Query: 1361 VEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPG 1504
V+ G +F Y+PFG GRR CP L+ +F+ P G
Sbjct: 423 VDFKGTNFEYIPFGAGRRMCPGMTFAQASMEIVLASLLYHFDWELPSG 280
Score = 34.1 bits (68), Expect(2) = 2e-007
Identities = 21/54 (38%), Positives = 30/54 (55%)
Frame = -1 / +2
Query: 1278 ALTRILLSAGMSXPPSLASWRFMCGTSSGMAIRSRSVSLITACR*GRLCVSGSV 1117
A T+ ++ +GMS P L + G S+G A + VSL+T+ R RL S SV
Sbjct: 500 AFTKTVVPSGMSYPRILQASMASLGRSNGAAGCNLIVSLMTSLRYLRLAKSSSV 661
>gb|AY551434.1| Hordeum vulgare subsp. vulgare ent-kaurene oxidase 1 (KO1) mRNA,
partial cds
Length = 1595
Score = 65.2 bits (136), Expect(3) = 6e-022
Identities = 27/65 (41%), Positives = 36/65 (55%)
Frame = +2 / +2
Query: 1115 ITEPDTHNLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWYLAN 1294
+TE LPYL AV ETLRL +PL+ P KL GYD+PA ++I++N +
Sbjct: 980 VTEDHVPRLPYLSAVFHETLRLHSPVPLVPPRFVHETTKLAGYDVPAGTEIVINLYGCNM 1159
Query: 1295 NPDSW 1309
N W
Sbjct: 1160 NKKDW 1174
Score = 44.6 bits (91), Expect(3) = 6e-022
Identities = 18/51 (35%), Positives = 31/51 (60%)
Frame = +2 / +2
Query: 950 INEDNVLFIVENINVAAIETTLWSIEWAVAELVNHPEIQQKLRQELDTVLG 1102
+ ++ ++ +V + A +TTL + EWA+ EL +PE Q +L QE+ V G
Sbjct: 818 LTDEQLMMLVWEAVIEAADTTLVTTEWAMYELAKNPEKQDRLYQEIREVCG 970
Score = 41.4 bits (84), Expect(3) = 6e-022
Identities = 20/104 (19%), Positives = 48/104 (46%)
Frame = +2 / +2
Query: 209 GNWLQVGDDLNHRNLAALSRKFGDVFLLRMGQRNLVVVSSPPLAREVLHTQGVEFGSRTR 388
GN Q+ + H+ A S +G ++ ++ G ++ V++S +A+E + + +R
Sbjct: 80 GNLHQLKEKKPHKTFAKWSDIYGPIYTIKTGASSVAVLNSSEVAKEAMVAKYSSISTRKL 259
Query: 389 NVVFDIFTDKGQDMVFTVYGDHWRKMRRIMTVPFFTNKVVQQYR 520
+ T + + YGD + ++R++ + +Q+R
Sbjct: 260 PKALSVLTRDKTMVATSDYGDFHKMVKRLVMSGMLGSSAQRQFR 391
Score = 27.2 bits (53), Expect(2) = 1.1
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = -3 / -2
Query: 1255 GGDVVXAELGVVEVHVRHQQRDGHPQPQRLLDHRLQV 1145
G DVV + G + Q D +P+RL++H +V
Sbjct: 1120 GWDVVAGQFGGLMDEPWRHQWDRRMEPERLMEHGAEV 1010
Score = 25.4 bits (49), Expect(2) = 1.1
Identities = 18/50 (36%), Positives = 22/50 (44%)
Frame = -1 / -3
Query: 1101 PSTVSSSCRSFCWISGWFTSSATAHSIDHSVVSIAATLMFSTMKSTLSSL 952
P T S S SG+ SS AHS+ VVS A+ T SS+
Sbjct: 969 PHTSRISW*SRSCFSGFLASSYIAHSVVTKVVSAASMTASHTSIINCSSV 820
>gb|AV915997.1|AV915997 AV915997 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags1a14 5', mRNA sequence
Length = 606
Score = 87.2 bits (184), Expect(2) = 7e-022
Identities = 33/67 (49%), Positives = 48/67 (71%)
Frame = +2 / +3
Query: 1109 HQITEPDTHNLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWYL 1288
H + E D ++L YL+AVIKETLRL M PLLVPH+ + D + GY IP+ ++++VN+ +
Sbjct: 234 HMVIEDDLNHLAYLKAVIKETLRLHMPAPLLVPHLAMADCVINGYTIPSGTRVIVNSRAI 413
Query: 1289 ANNPDSW 1309
A +P SW
Sbjct: 414 ARDPSSW 434
Score = 37.7 bits (76), Expect(2) = 7e-022
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +2 / +3
Query: 1361 VEANGNDFRYLPFGVGRRSCP 1423
++ GN F YLPFG GRR CP
Sbjct: 492 MDYKGNGFLYLPFGTGRRICP 554
Score = 33.1 bits (66), Expect(2) = 0.001
Identities = 23/53 (43%), Positives = 27/53 (50%)
Frame = -1 / -3
Query: 1275 LTRILLSAGMSXPPSLASWRFMCGTSSGMAIRSRSVSLITACR*GRLCVSGSV 1117
LT + GM P S GT SG + SRSVSL+TA R* R S S+
Sbjct: 400 LTMTRVPDGMV*PFMTQSAMARWGTRSGAGM*SRSVSLMTAFR*ARWLRSSSM 242
Score = 29.9 bits (59), Expect(2) = 0.001
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -1 / -3
Query: 1434 RMIPGQLLRPTPKGRYLKSLPL 1369
+ PG +LRP P GR K PL
Sbjct: 565 KFXPGHILRPVPNGR*RKPFPL 500
>gb|AV916927.1|AV916927 AV916927 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags20c01 5', mRNA sequence
Length = 533
Score = 83.5 bits (176), Expect(2) = 7e-022
Identities = 29/65 (44%), Positives = 46/65 (70%)
Frame = +2 / +1
Query: 1115 ITEPDTHNLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWYLAN 1294
+T+ D H LPYL+AVIKETLRL M PL+VPH+++ + + GY IP+ ++ +N + +
Sbjct: 148 VTQDDLHGLPYLKAVIKETLRLHMPGPLMVPHLSMDECIINGYTIPSGTRTFINTYAIQR 327
Query: 1295 NPDSW 1309
+P +W
Sbjct: 328 DPSNW 342
Score = 41.8 bits (85), Expect(2) = 2e-007
Identities = 17/39 (43%), Positives = 25/39 (64%)
Frame = -1 / -1
Query: 1485 SKFWTRRPMVMPRMGRARMIPGQLLRPTPKGRYLKSLPL 1369
SK++ R + + A++IPG +LRP P G+Y KS PL
Sbjct: 524 SKWYMRFVSMS*MVAVAKLIPGHILRPDPNGKYWKSFPL 408
Score = 41.4 bits (84), Expect(2) = 7e-022
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +2 / +1
Query: 1361 VEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFE 1486
++ GNDF+Y PFG GRR CP L+ +F+
Sbjct: 400 MDYKGNDFQYFPFGSGRRICPGINFATATIQLMLTNLMYHFD 525
Score = 34.5 bits (69), Expect(2) = 2e-007
Identities = 21/46 (45%), Positives = 27/46 (58%)
Frame = -1 / -1
Query: 1275 LTRILLSAGMSXPPSLASWRFMCGTSSGMAIRSRSVSLITACR*GR 1138
L ++ + G+ P + S GT SG + SRSVSLITA R*GR
Sbjct: 308 LMKVRVPDGIV*PFMMHSSMERWGTMSGPGM*SRSVSLITAFR*GR 171
>gb|AL501446.1|AL501446 AL501446 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW04D19u 3', mRNA sequence
Length = 451
Score = 88.6 bits (187), Expect(2) = 7e-022
Identities = 35/40 (87%), Positives = 37/40 (92%)
Frame = +2 / -1
Query: 1466 RLVQNFELLPPPGQDKVDTTEKGGQFSLHILKHSTIVCKP 1585
RLVQNFELLPPPGQDK+DTTEK GQFS ILKH+TIVCKP
Sbjct: 355 RLVQNFELLPPPGQDKIDTTEKPGQFSNQILKHATIVCKP 236
Score = 80.3 bits (169), Expect = 3e-014
Identities = 35/55 (63%), Positives = 38/55 (69%)
Frame = -1 / +3
Query: 1584 GLHTMVECFKMWRLNWPPFSVVSTLSCPGGGSSSKFWTRRPMVMPRMGRARMIPG 1420
GL TMV C ++W LN P FSVVS LSCPGGGSSSKF TRRPM G+ PG
Sbjct: 237 GLQTMVACLRIWLLNCPGFSVVSILSCPGGGSSSKFCTRRPMRDADDGQREDDPG 401
Score = 46.9 bits (96), Expect(2) = 2e-012
Identities = 17/32 (53%), Positives = 20/32 (62%)
Frame = -2 / +1
Query: 1601 ALKAFLACTRWWNASRCGD*TGLPSRWCXPCP 1506
++K +AC RWW A G *T L SRWC CP
Sbjct: 220 SIKPRVACRRWWRA*GSGC*TALASRWCRSCP 315
Score = 46.4 bits (95), Expect = 5e-004
Identities = 19/40 (47%), Positives = 21/40 (52%)
Frame = +1 / -3
Query: 1477 ELXXXXXXXXGQGXHHREGRPVQSPHLEAFHHRVQAKNAL 1596
EL GQ HHRE R VQ P +A HHR+QA L
Sbjct: 344 ELRAAAAAGAGQDRHHREARAVQQPDPQARHHRLQATRGL 225
Score = 46.0 bits (94), Expect(2) = 2e-012
Identities = 20/28 (71%), Positives = 21/28 (75%)
Frame = -1 / +1
Query: 1458 VMPRMGRARMIPGQLLRPTPKGRYLKSL 1375
VMP MG ARMIPGQL R TPKG KS+
Sbjct: 364 VMPMMGSARMIPGQLRRXTPKGTNRKSV 447
Score = 42.3 bits (86), Expect = 0.008
Identities = 20/37 (54%), Positives = 23/37 (62%)
Frame = -3 / +2
Query: 1585 WLAHDGGMLQDVETELASXXXXXXXXLPGRRQQLEVL 1475
WLA DGG+L+D+ EL LP RRQQLEVL
Sbjct: 236 WLADDGGVLEDLVAELPWLLGGVDLVLPRRRQQLEVL 346
Score = 36.3 bits (73), Expect(2) = 7e-022
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = +2 / -3
Query: 1379 DFRYLPFGVGRRSCP 1423
DFR++PFGV RRSCP
Sbjct: 443 DFRFVPFGVXRRSCP 399
>gb|BJ465003.1|BJ465003 BJ465003 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags36o23 5', mRNA sequence
Length = 664
Score = 77.6 bits (163), Expect(2) = 1e-021
Identities = 30/57 (52%), Positives = 42/57 (73%)
Frame = +2 / +3
Query: 1139 LPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWYLANNPDSW 1309
L YL+AVIKETLRL M PLLVPH+ + D + GY IP+ ++++VN+ +A +P SW
Sbjct: 33 LAYLKAVIKETLRLHMPAPLLVPHLAMADCVINGYTIPSGTRVIVNSRAIARDPSSW 203
Score = 49.2 bits (101), Expect(2) = 7e-009
Identities = 20/45 (44%), Positives = 26/45 (57%)
Frame = -1 / -1
Query: 1503 PGGGSSSKFWTRRPMVMPRMGRARMIPGQLLRPTPKGRYLKSLPL 1369
PGG SK++TR ++ A+ IPG +LRP P GR K PL
Sbjct: 403 PGGSFQSKWYTRLASMISMAAMAKFIPGHILRPVPNGR*RKPFPL 269
Score = 46.4 bits (95), Expect(2) = 1e-021
Identities = 19/48 (39%), Positives = 23/48 (47%)
Frame = +2 / +3
Query: 1361 VEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPG 1504
++ GN F YLPFG GRR CP LV +F+ PPG
Sbjct: 261 MDYKGNGFLYLPFGTGRRICPGINFAIAAIEIMLANLVYHFDWKLPPG 404
Score = 31.8 bits (63), Expect(2) = 7e-009
Identities = 21/46 (45%), Positives = 24/46 (52%)
Frame = -1 / -1
Query: 1275 LTRILLSAGMSXPPSLASWRFMCGTSSGMAIRSRSVSLITACR*GR 1138
LT + GM P S GT SG + SRSVSL+TA R* R
Sbjct: 169 LTMTRVPDGMV*PFMTQSAMARWGTRSGAGM*SRSVSLMTAFR*AR 32
>gb|BU968861.1|BU968861 HB08M23r BC Hordeum vulgare subsp. vulgare cDNA clone HB08M23
5-PRIME, mRNA sequence
Length = 624
Score = 89.5 bits (189), Expect(2) = 1e-021
Identities = 34/67 (50%), Positives = 49/67 (73%)
Frame = +2 / +2
Query: 1109 HQITEPDTHNLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWYL 1288
H +TE D ++L YL+AVIKETLRL M PLLVPH+ + D + GY IP+ ++++VN+ +
Sbjct: 257 HMVTEDDLNHLAYLKAVIKETLRLHMPAPLLVPHLAMADCIINGYTIPSGTRVIVNSRAI 436
Query: 1289 ANNPDSW 1309
A +P SW
Sbjct: 437 ARDPSSW 457
Score = 37.3 bits (75), Expect(2) = 7e-005
Identities = 25/53 (47%), Positives = 28/53 (52%)
Frame = -1 / -1
Query: 1275 LTRILLSAGMSXPPSLASWRFMCGTSSGMAIRSRSVSLITACR*GRLCVSGSV 1117
LT + GM P + S GT SG + SRSVSLITA R* R S SV
Sbjct: 423 LTMTRVPDGMV*PFMMQSAMARWGTRSGAGM*SRSVSLITAFR*ARWLRSSSV 265
Score = 34.5 bits (69), Expect(2) = 1e-021
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +2 / +2
Query: 1361 VEANGNDFRYLPFGVGRRSCP 1423
++ GN F YLPFG RR CP
Sbjct: 515 MDYKGNGFLYLPFGTXRRICP 577
Score = 29.9 bits (59), Expect(2) = 7e-005
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -1 / -1
Query: 1437 ARMIPGQLLRPTPKGRYLKSLPL 1369
A+ IPG +LR P GR K PL
Sbjct: 591 AKFIPGHILRXVPNGR*RKPFPL 523
>gb|BJ549009.1|BJ549009 BJ549009 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal38d04 3', mRNA sequence
Length = 552
Score = 76.2 bits (160), Expect(2) = 1e-021
Identities = 27/59 (45%), Positives = 41/59 (69%)
Frame = +2 / -1
Query: 1133 HNLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWYLANNPDSW 1309
+N+ YL+ VIKE+LRL PLL PH+ + D + GY +PA ++++VNAW + +P SW
Sbjct: 552 NNMXYLRXVIKESLRLHPVAPLLAPHLXMADCIIDGYIVPAGTRVVVNAWAIGRDPSSW 376
Score = 49.6 bits (102), Expect(2) = 6e-008
Identities = 23/55 (41%), Positives = 28/55 (50%)
Frame = -1 / +2
Query: 1521 VSTLSCPGGGSSSKFWTRRPMVMPRMGRARMIPGQLLRPTPKGRYLKSLPLASTC 1357
+S L P G S SK+ TR + R IPG +LRP P G+ KS PL C
Sbjct: 158 MSFLPTPRGSSQSKWHTRFANISSTFAIPRFIPGHILRPAPNGKN*KSFPLKLIC 322
Score = 47.8 bits (98), Expect(2) = 1e-021
Identities = 20/54 (37%), Positives = 26/54 (48%)
Frame = +2 / -1
Query: 1358 HVEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQDKVD 1519
H+ GNDF++LPFG GRR CP LV +F+ P G + D
Sbjct: 321 HINFKGNDFQFLPFGAGRRMCPGMNLGIANVELMLANLVCHFDWELPLGVGRKD 160
Score = 28.1 bits (55), Expect(2) = 6e-008
Identities = 16/44 (36%), Positives = 19/44 (43%)
Frame = -1 / +2
Query: 1278 ALTRILLSAGMSXPPSLASWRFMCGTSSGMAIRSRSVSLITACR 1147
ALT + AG P + S CG G SRS S +T R
Sbjct: 407 ALTTTRVPAGTMYPSMMQSAMXRCGARRGATGCSRSDSFMTXLR 538
>gb|AV917596.1|AV917596 AV917596 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags10j16 3', mRNA sequence
Length = 644
Score = 52.4 bits (108), Expect(3) = 2e-021
Identities = 21/54 (38%), Positives = 27/54 (50%)
Frame = +2 / -3
Query: 1358 HVEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQDKVD 1519
HV GNDF++LPFG GRR CP L+ +F+ P G D+ D
Sbjct: 303 HVNFKGNDFQFLPFGAGRRMCPGINLGITNVELMLANLIYHFDWELPVGVDRKD 142
Score = 49.2 bits (101), Expect = 7e-005
Identities = 23/54 (42%), Positives = 30/54 (55%)
Frame = -1 / +2
Query: 1521 VSTLSCPGGGSSSKFWTRRPMVMPRMGRARMIPGQLLRPTPKGRYLKSLPLAST 1360
+S LS P G S SK++ R + + R IPG +LRP P G+ KS PL T
Sbjct: 140 MSFLSTPTGSSQSKWYMRFANISSTLVIPRFIPGHILRPAPNGKN*KSFPLKLT 301
Score = 46.9 bits (96), Expect(3) = 2e-021
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +2 / -3
Query: 1193 PLLVPHMNLHDAKLGGYDIPAESKILVNAWYLANNPDSW 1309
P L PH+ + D + GY +PA + ILVN W + + +SW
Sbjct: 474 PFLPPHLAMGDCNIVGYMVPAGTHILVNVWAIGRDSNSW 358
Score = 41.8 bits (85), Expect(3) = 2e-021
Identities = 18/52 (34%), Positives = 32/52 (61%)
Frame = +2 / -2
Query: 1025 EWAVAELVNHPEIQQKLRQELDTVLGPGHQITEPDTHNLPYLQAVIKETLRL 1180
E+ +AEL+ P + KL+ E+ +++ G + + YL+AVIKE+LR+
Sbjct: 643 EFTLAELMRRPSLMGKLQDEVRSIVPLGQETVIETDIKMVYLRAVIKESLRV 488
>gb|BF254550.2|BF254550 HVSMEf0004F12f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEf0004F12f, mRNA sequence
Length = 799
Score = 103 bits (220), Expect = 3e-021
Identities = 40/92 (43%), Positives = 60/92 (65%)
Frame = +2 / +3
Query: 1034 VAELVNHPEIQQKLRQELDTVLGPGHQITEPDTHNLPYLQAVIKETLRLRMAIPLLVPHM 1213
V ++V +P +Q K+++ELD V+G ++E D +LPYLQAV+KE+LRL PL++PH
Sbjct: 3 VKDVVRNPRVQHKVQEELDRVVGRDRVLSETDLPSLPYLQAVVKESLRLHPPTPLMLPHK 182
Query: 1214 NLHDAKLGGYDIPAESKILVNAWYLANNPDSW 1309
D K+ GY IP + + N W +A NP +W
Sbjct: 183 ASADVKVAGYYIPKGASVTENVWAIARNPYAW 278
Score = 51.0 bits (105), Expect = 2e-005
Identities = 32/77 (41%), Positives = 40/77 (51%)
Frame = -1 / -1
Query: 1263 LLSAGMSXPPSLASWRFMCGTSSGMAIRSRSVSLITACR*GRLCVSGSVIWWPGPSTVSS 1084
L GM P + S +CG+ SG+ SRS S TACR GRL S S P+T SS
Sbjct: 232 LAPLGM**PATFTSALALCGSISGVGGCSRSDSFTTACRYGRLGKSVSDSTRSRPTTRSS 53
Query: 1083 SCRSFCWISGWFTSSAT 1033
S + C G+ T+S T
Sbjct: 52 SSCTLCCTLGFLTTSFT 2
Score = 33.6 bits (67), Expect = 3.5
Identities = 18/36 (50%), Positives = 20/36 (55%)
Frame = -3 / -3
Query: 1252 GDVVXAELGVVEVHVRHQQRDGHPQPQRLLDHRLQV 1145
GDVV +L V VR QR QP+RLL LQV
Sbjct: 221 GDVVAGDLHVGAGLVREHQRRRRVQPERLLHDGLQV 114
>gb|BM816874.1|BM816874 HB105E09_SK.ab1 HB Hordeum vulgare subsp. vulgare cDNA clone
HB105E09_SK.ab1 similar to Steroid
17-alpha-monooxygenase,Unspecific monooxygenase, mRNA
sequence
Length = 884
Score = 76.2 bits (160), Expect(2) = 5e-021
Identities = 28/65 (43%), Positives = 41/65 (63%)
Frame = +2 / +2
Query: 1115 ITEPDTHNLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWYLAN 1294
+TE D + YL+AVIKE+LRL PLLVPH+ + D + GY +PA + +L+N W +
Sbjct: 257 VTEADISKMTYLRAVIKESLRLHPVAPLLVPHLAMIDGNIDGYMVPAGTHVLINVWAIGR 436
Query: 1295 NPDSW 1309
+ W
Sbjct: 437 DSSYW 451
Score = 51.9 bits (107), Expect(2) = 2e-010
Identities = 22/55 (40%), Positives = 31/55 (56%)
Frame = -1 / -3
Query: 1524 VVSTLSCPGGGSSSKFWTRRPMVMPRMGRARMIPGQLLRPTPKGRYLKSLPLAST 1360
++S LS P G S SK++ + + + R IPG +LRP P G+ KS PL T
Sbjct: 672 LISFLSTPSGNSQSKWYIKFANISSTVAIPRFIPGHILRPAPNGKNWKSFPLKLT 508
Score = 46.0 bits (94), Expect(2) = 5e-021
Identities = 19/53 (35%), Positives = 26/53 (49%)
Frame = +2 / +2
Query: 1361 VEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQDKVD 1519
V GNDF++LPFG GRR CP L+ +F+ P G ++ D
Sbjct: 509 VNFKGNDFQFLPFGAGRRMCPGINLGIATVELMLANLMYHFDWELPLGVERKD 667
Score = 34.1 bits (68), Expect(2) = 2e-010
Identities = 22/53 (41%), Positives = 26/53 (49%)
Frame = -1 / -3
Query: 1275 LTRILLSAGMSXPPSLASWRFMCGTSSGMAIRSRSVSLITACR*GRLCVSGSV 1117
L + + AG P L S CGTS G SRS S +TA R L +S SV
Sbjct: 417 LIKTCVPAGTMYPSMLPSIIARCGTSKGATG*SRSDSFMTALRYVILLMSASV 259
>gb|BG416486.2|BG416486 HVSMEk0012I14f Hordeum vulgare testa/pericarp EST library HVcDNA0013
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEk0012I14f, mRNA sequence
Length = 898
Score = 102 bits (218), Expect = 5e-021
Identities = 42/105 (40%), Positives = 65/105 (61%)
Frame = +2 / +2
Query: 995 AAIETTLWSIEWAVAELVNHPEIQQKLRQELDTVLGPGHQITEPDTHNLPYLQAVIKETL 1174
A ET+ +++WA++EL+ +P + +K + E+ L ++TE D NL YL+ VIKET+
Sbjct: 86 AGSETSATTLQWAMSELMRNPNVMRKAQAEVRDNLQNKPKVTEDDLVNLKYLKLVIKETM 265
Query: 1175 RLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWYLANNPDSW 1309
RL A PLL+P K+ GYD+P + +LVNAW + +P W
Sbjct: 266 RLHPAAPLLLPREAREPCKILGYDVPKGTTVLVNAWAIGRDPKHW 400
>gb|BI960706.1|BI960706 HVSMEn0001B07f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0001B07f,
mRNA sequence
Length = 1300
Score = 101 bits (215), Expect = 1e-020
Identities = 40/115 (34%), Positives = 69/115 (60%)
Frame = +2 / +3
Query: 965 VLFIVENINVAAIETTLWSIEWAVAELVNHPEIQQKLRQELDTVLGPGHQITEPDTHNLP 1144
+L ++ ++ A +T+ ++EWA+AEL+ +P + R+ELD V+G Q+ E D L
Sbjct: 135 LLSLLSDLFSAGTDTSSATVEWAMAELLLNPSSMSRAREELDQVIGSKEQVEESDIGQLK 314
Query: 1145 YLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWYLANNPDSW 1309
YLQA++KET RL P L+PH+ ++ GY + +++LVN W + ++ W
Sbjct: 315 YLQAIVKETFRLHPPAPFLLPHVAETTTQVQGYTVAKGTRLLVNVWAIGHDXKVW 479
Score = 29.9 bits (59), Expect(2) = 0.59
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = -1 / -1
Query: 1101 PSTVSSSCRSFCWISGWFTSSATAHSIDHSVVSIAA 994
P T SSS R+ G+ +SSA AHS +VS+ A
Sbjct: 271 PITWSSSSRALDMDDGFSSSSAIAHSTVAELVSVPA 164
Score = 23.5 bits (45), Expect(2) = 0.59
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -3 / -3
Query: 1213 HVRHQQRDGHPQPQRLLDHRLQVGE 1139
HVR Q+ +P+RLL L+V E
Sbjct: 383 HVRQQEWCRRMEPERLLHDGLEVLE 309
>gb|AV912967.1|AV912967 AV912967 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags11c24 5', mRNA sequence
Length = 489
Score = 80.3 bits (169), Expect(3) = 2e-020
Identities = 35/105 (33%), Positives = 56/105 (53%)
Frame = +2 / +1
Query: 959 DNVLFIVENINVAAIETTLWSIEWAVAELVNHPEIQQKLRQELDTVLGPGHQITEPDTHN 1138
D+ I+ + +AA +T+ S W + EL+ HP + K + E+ G Q+ D
Sbjct: 28 DHAKSILFDTFMAATDTSSISSYWVMTELIRHPRVLHKAQAEVRAAAGGAPQVRISDMPK 207
Query: 1139 LPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILV 1273
L YL+ V+ ET R+ +LVP + +LGGYDIPA + ++V
Sbjct: 208 LKYLRMVLSETFRMHPPATMLVPRETMRPIRLGGYDIPANTMLMV 342
Score = 35.0 bits (70), Expect(3) = 2e-020
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +2 / +2
Query: 1361 VEANGNDFRYLPFGVGRRSCP 1423
V+ NG + LPFG GRR CP
Sbjct: 425 VDFNGGHYELLPFGAGRRICP 487
Score = 22.1 bits (42), Expect(3) = 2e-020
Identities = 6/12 (50%), Positives = 8/12 (66%)
Frame = +2 / +2
Query: 1274 NAWYLANNPDSW 1309
NAW + +P SW
Sbjct: 344 NAWAIGRDPASW 379
>gb|BI948978.1|BI948978 HVSMEl0011O14f Hordeum vulgare spike EST library HVcDNA0012 (Fusarium
infected) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEl0011O14f, mRNA sequence
Length = 813
Score = 100 bits (213), Expect = 3e-020
Identities = 40/97 (41%), Positives = 59/97 (60%)
Frame = +2 / +1
Query: 965 VLFIVENINVAAIETTLWSIEWAVAELVNHPEIQQKLRQELDTVLGPGHQITEPDTHNLP 1144
++ + N V ETT +IEWA++ L+NHP +K + E+D +G + D L
Sbjct: 130 IIALCANRGVGGTETTSTTIEWAMSLLLNHPAALKKAQAEIDASIGTSRMVAADDVPRLS 309
Query: 1145 YLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPA 1255
YLQ +I ETLR+ A PLL+PH + D K+GGYD+P+
Sbjct: 310 YLQCIINETLRMYPAAPLLLPHESSADCKVGGYDLPS 420
Score = 67.0 bits (140), Expect = 3e-010
Identities = 39/95 (41%), Positives = 51/95 (53%)
Frame = -1 / -2
Query: 1263 LLSAGMSXPPSLASWRFMCGTSSGMAIRSRSVSLITACR*GRLCVSGSVIWWPGPSTVSS 1084
++ G S PP+L S CG+SSG A RSVSL+ R* R S + P S
Sbjct: 428 MVPLGKS*PPTLQSAEDSCGSSSGAAGYMRSVSLMMHWR*LRRGTSSAATMREVPMDASI 249
Query: 1083 SCRSFCWISGWFTSSATAHSIDHSVVSIAATLMFS 979
S +F +GWF+SS AHSI VVS+ T +F+
Sbjct: 248 SAWAFLSAAGWFSSSDIAHSIVVEVVSVPPTPLFA 144
>gb|AV927306.1|AV927306 AV927306 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp. vulgare
cDNA clone basd1h15 3', mRNA sequence
Length = 586
Score = 73.0 bits (153), Expect(2) = 3e-020
Identities = 28/54 (51%), Positives = 40/54 (74%)
Frame = +2 / -3
Query: 1148 LQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWYLANNPDSW 1309
L+AVIKETLRL M PLLVPH+ + D + GY IP+ ++++VN+ +A +P SW
Sbjct: 584 LKAVIKETLRLHMPAPLLVPHLAMADCVINGYTIPSGTRVIVNSRAIARDPSSW 423
Score = 49.2 bits (101), Expect(2) = 4e-008
Identities = 20/45 (44%), Positives = 26/45 (57%)
Frame = -1 / +1
Query: 1503 PGGGSSSKFWTRRPMVMPRMGRARMIPGQLLRPTPKGRYLKSLPL 1369
PGG SK++TR ++ A+ IPG +LRP P GR K PL
Sbjct: 223 PGGSFQSKWYTRLASMISMAAMAKFIPGHILRPVPNGR*RKPFPL 357
Score = 46.4 bits (95), Expect(2) = 3e-020
Identities = 19/48 (39%), Positives = 23/48 (47%)
Frame = +2 / -3
Query: 1361 VEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPG 1504
++ GN F YLPFG GRR CP LV +F+ PPG
Sbjct: 365 MDYKGNGFLYLPFGTGRRICPGINFAIAAIEIMLANLVYHFDWKLPPG 222
Score = 29.0 bits (57), Expect(2) = 4e-008
Identities = 19/43 (44%), Positives = 22/43 (51%)
Frame = -1 / +1
Query: 1275 LTRILLSAGMSXPPSLASWRFMCGTSSGMAIRSRSVSLITACR 1147
LT + GM P S GT SG + SRSVSL+TA R
Sbjct: 457 LTMTRVPDGMV*PFMTQSAMARWGTRSGAGM*SRSVSLMTAFR 585
>gb|CA019349.1|CA019349 HV11L11r HV Hordeum vulgare subsp. vulgare cDNA clone HV11L11
5-PRIME, mRNA sequence
Length = 495
Score = 99.6 bits (211), Expect = 5e-020
Identities = 41/117 (35%), Positives = 64/117 (54%)
Frame = +2 / +3
Query: 959 DNVLFIVENINVAAIETTLWSIEWAVAELVNHPEIQQKLRQELDTVLGPGHQITEPDTHN 1138
D+ I+ + +AA +T+ S W + EL+ HP + K + E+ G Q+ D
Sbjct: 54 DHAKSILFDTFMAATDTSSISSYWVMTELIRHPRVLHKAQAEVRAAAGGAPQVRISDMPK 233
Query: 1139 LPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWYLANNPDSW 1309
L YL+ V+ ET R+ +LVP + +LGGYDIPA + ++VNAW + +P SW
Sbjct: 234 LKYLRMVLSETFRMHPPATMLVPRETMRPIRLGGYDIPANTMLMVNAWAIGRDPASW 404
>gb|CA028447.1|CA028447 HZ61P23r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ61P23
5-PRIME, mRNA sequence
Length = 580
Score = 99.6 bits (211), Expect = 5e-020
Identities = 39/120 (32%), Positives = 72/120 (60%)
Frame = +2 / +1
Query: 950 INEDNVLFIVENINVAAIETTLWSIEWAVAELVNHPEIQQKLRQELDTVLGPGHQITEPD 1129
+ D++ ++ +I +A+ ET+ +++WA+AEL+ +P + +K ++E+ L ++TE
Sbjct: 220 LTNDDIKAVIVDIFIASSETSATALQWAMAELLRNPRVMRKAQEEVRRALDGRDRVTEES 399
Query: 1130 THNLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWYLANNPDSW 1309
+L YL VIKE LRL +L+P ++ G+D+PA + +LVNAW + +P W
Sbjct: 400 VASLRYLNLVIKEVLRLHPPATMLLPRECRAPCRVLGFDVPAGAMVLVNAWAIGRDPAHW 579
>emb|AJ234781.1|HVU234781 Hordeum vulgare genomic DNA fragment; clone MWG2112.uni
Length = 392
Score = 99.6 bits (211), Expect = 5e-020
Identities = 39/51 (76%), Positives = 43/51 (84%)
Frame = +2 / -3
Query: 995 AAIETTLWSIEWAVAELVNHPEIQQKLRQELDTVLGPGHQITEPDTHNLPY 1147
AAIETTLWSIEW +AELVNHPEIQQKLR+E+ VLGPG +TEPD LPY
Sbjct: 153 AAIETTLWSIEWGLAELVNHPEIQQKLREEIVAVLGPGTPVTEPDLERLPY 1
Score = 87.7 bits (185), Expect = 2e-016
Identities = 38/51 (74%), Positives = 40/51 (78%)
Frame = -1 / +2
Query: 1146 *GRLCVSGSVIWWPGPSTVSSSCRSFCWISGWFTSSATAHSIDHSVVSIAA 994
*GR SGSV PGPST + S RSFCWISGWFTSSA HSIDHSVVS+AA
Sbjct: 2 *GRRSRSGSVTGVPGPSTATISSRSFCWISGWFTSSARPHSIDHSVVSMAA 154
Score = 39.1 bits (79), Expect = 0.077
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = -3 / +1
Query: 1057 RVVHQLSDRPLDRPQRGLDRC 995
RVVHQL + PLDRPQR L+ C
Sbjct: 91 RVVHQLREAPLDRPQRRLNGC 153
>gb|AJ463481.1|AJ463481 AJ463481 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200025H07F1, mRNA sequence
Length = 240
Score = 99.1 bits (210), Expect = 7e-020
Identities = 39/62 (62%), Positives = 44/62 (70%)
Frame = +2 / +3
Query: 1238 GYDIPAESKILVNAWYLANNPDSWXXXXXXXXXXXXXXXKHVEANGNDFRYLPFGVGRRS 1417
GYDIPAESKILVNAW+LAN+P W K VEA+GNDFR++PFGVGRRS
Sbjct: 3 GYDIPAESKILVNAWFLANDPKRWVRADEFRPERFLEEEKSVEAHGNDFRFVPFGVGRRS 182
Query: 1418 CP 1423
CP
Sbjct: 183 CP 188
Score = 92.7 bits (196), Expect = 6e-018
Identities = 47/79 (59%), Positives = 47/79 (59%)
Frame = -1 / -3
Query: 1473 TRRPMVMPRMGRARMIPGQLLRPTPKGRYLKSLPLASTCFXXXXXXXXXXXXXXXXXXXX 1294
TRRP VMP MG ARMIPGQL RPTPKG KSLP AST F
Sbjct: 238 TRRPSVMPMMGSARMIPGQLRRPTPKGTNRKSLPWASTDFSSSRKRSGLNSSARTHRLGS 59
Query: 1293 LARYQALTRILLSAGMSXP 1237
LAR QALTRIL SAGMS P
Sbjct: 58 LARNQALTRILDSAGMS*P 2
>gb|BQ656344.1|BQ656344 HA04M20u HA Hordeum vulgare subsp. vulgare cDNA clone HA04M20
3-PRIME, mRNA sequence
Length = 480
Score = 99.1 bits (210), Expect = 7e-020
Identities = 38/69 (55%), Positives = 47/69 (68%)
Frame = +2 / -1
Query: 1379 DFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQDKVDTTEKGGQFSLHIL 1558
DFR+LPFGVGRRSCP +LV++FE++PPPG DK+D +EKGGQFSLHI
Sbjct: 465 DFRFLPFGVGRRSCPGIILALPILALIVGKLVRSFEMVPPPGVDKLDVSEKGGQFSLHIA 286
Query: 1559 KHSTIVCKP 1585
HS + P
Sbjct: 285 NHSLVAFHP 259
Score = 93.6 bits (198), Expect = 3e-018
Identities = 40/70 (57%), Positives = 47/70 (67%)
Frame = -1 / +2
Query: 1587 LGLHTMVECFKMWRLNWPPFSVVSTLSCPGGGSSSKFWTRRPMVMPRMGRARMIPGQLLR 1408
+G + E MWRLN PPFS+ S+LS PGGG+ SK T P + RMG ARM+PGQL R
Sbjct: 257 MGWNATREWLAMWRLNCPPFSLTSSLSTPGGGTISKLLTSFPTMSARMGSARMMPGQLRR 436
Query: 1407 PTPKGRYLKS 1378
PTP GR KS
Sbjct: 437 PTPNGRNRKS 466
>gb|AL501837.1|AL501837 AL501837 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW05I23u 3', mRNA sequence
Length = 473
Score = 98.2 bits (208), Expect = 1e-019
Identities = 41/57 (71%), Positives = 43/57 (75%)
Frame = -1 / +3
Query: 1584 GLHTMVECFKMWRLNWPPFSVVSTLSCPGGGSSSKFWTRRPMVMPRMGRARMIPGQL 1414
GL TM C ++W LN P F V S LSCPGGGSSSKF TRRP VMP MG ARMIPGQL
Sbjct: 297 GLXTMGACLRIWLLNCPGFXVGSILSCPGGGSSSKFCTRRPSVMPMMGSARMIPGQL 467
Score = 85.8 bits (181), Expect = 7e-016
Identities = 36/58 (62%), Positives = 38/58 (65%)
Frame = +2 / -2
Query: 1412 RSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQDKVDTTEKGGQFSLHILKHSTIVCKP 1585
RSCP RLVQNFELLPPPGQDK+D T K GQFS ILKH+ IVCKP
Sbjct: 469 RSCPGIILALPIIGITLGRLVQNFELLPPPGQDKIDPTXKPGQFSNQILKHAPIVCKP 296
Score = 39.6 bits (80), Expect = 0.056
Identities = 20/37 (54%), Positives = 23/37 (62%)
Frame = -3 / +2
Query: 1585 WLAHDGGMLQDVETELASXXXXXXXXLPGRRQQLEVL 1475
WLA DGG+L+D+ EL LP RR QLEVL
Sbjct: 296 WLAXDGGVLEDLVAELPWLXGGVDLVLPRRRXQLEVL 406
Score = 35.9 bits (72), Expect = 0.71
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = -2 / +1
Query: 1601 ALKAFLACTRWWNASRCGD*TGLPSRWCXPCP 1506
++K +AC RW A G *T L SRW CP
Sbjct: 280 SIKPRVACXRWGRA*GSGC*TALASRWGRSCP 375
Score = 35.9 bits (72), Expect = 0.71
Identities = 18/40 (45%), Positives = 19/40 (47%)
Frame = +1 / -1
Query: 1477 ELXXXXXXXXGQGXHHREGRPVQSPHLEAFHHRVQAKNAL 1596
EL GQ HRE R VQ P +A HR QA L
Sbjct: 404 ELRAAXAAGAGQDRPHREARAVQQPDPQARPHRXQATRGL 285
>gb|BI957225.1|BI957225 HVSMEn0008D16f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0008D16f,
mRNA sequence
Length = 622
Score = 98.2 bits (208), Expect = 1e-019
Identities = 38/116 (32%), Positives = 70/116 (60%)
Frame = +2 / +1
Query: 950 INEDNVLFIVENINVAAIETTLWSIEWAVAELVNHPEIQQKLRQELDTVLGPGHQITEPD 1129
I E N+ ++ ++ A +T+ +EWA+AE++N+P I + ++E+D V+G G ++ E D
Sbjct: 151 ITEVNIKGLIFDMFTAGTDTSSIIVEWAMAEMINNPSIMARAQEEMDRVVGRGRRLEESD 330
Query: 1130 THNLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWYLANN 1297
NLPYLQA+ KE +RL + P +P + ++ G+ +P ++ L+ + A N
Sbjct: 331 IANLPYLQAICKEAMRLHPSTPFSLPDXFFEECEVDGHHVPGNTRFLITSGPSAAN 498
Score = 46.4 bits (95), Expect = 5e-004
Identities = 34/97 (35%), Positives = 45/97 (46%)
Frame = -1 / -3
Query: 1239 PPSLASWRFMCGTSSGMAIRSRSVSLITACR*GRLCVSGSVIWWPGPSTVSSSCRSFCWI 1060
P + S + G +G+ R SL ACR*GRL +S S P P+T S S + I
Sbjct: 440 PSTSHSSKXKSGRLNGVEGWRRIASLQMACR*GRLAMSDSSSRRPRPTTRSISSCARAMI 261
Query: 1059 SGWFTSSATAHSIDHSVVSIAATLMFSTMKSTLSSLI 949
G SA AHS VS+ A M L+S++
Sbjct: 260 DGLLIISAIAHSTMIDDVSVPAVNMSKMRPLMLTSVM 150
>gb|AV912854.1|AV912854 AV912854 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags10j16 5', mRNA sequence
Length = 617
Score = 98.2 bits (208), Expect = 1e-019
Identities = 41/132 (31%), Positives = 76/132 (57%)
Frame = +2 / +3
Query: 914 IDHILEAQQKGEINEDNVLFIVENINVAAIETTLWSIEWAVAELVNHPEIQQKLRQELDT 1093
+D +L AQ++ + D++ ++ ++ T+ ++E+ +AEL+ P + KL+ E+ +
Sbjct: 141 LDILLSAQEEYGLTRDHIKALLTDVFFGLTNTSSNTLEFTLAELMRRPSLMGKLQDEVRS 320
Query: 1094 VLGPGHQITEPDTHNLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILV 1273
++ G + + YL+AVIKE+LRL P L PH+ + D + GY +PA + ILV
Sbjct: 321 IVPLGQETVIETDIKMVYLRAVIKESLRLYPVAPFLPPHLAMGDCNIVGYMVPAGTHILV 500
Query: 1274 NAWYLANNPDSW 1309
N W + + +SW
Sbjct: 501 NVWAIGRDSNSW 536
Score = 35.4 bits (71), Expect = 0.97
Identities = 28/84 (33%), Positives = 36/84 (42%)
Frame = -1 / -2
Query: 1275 LTRILLSAGMSXPPSLASWRFMCGTSSGMAIRSRSVSLITACR*GRLCVSGSVIWWPGPS 1096
LTR+ + AG P L S CG G +RS S ITA R L + P +
Sbjct: 502 LTRMCVPAGTM*PTMLQSPMARCGGRKGATGYNRSDSFITALRYTILMSVSMTVSCPRGT 323
Query: 1095 TVSSSCRSFCWISGWFTSSATAHS 1024
+ +S SF G SSA +S
Sbjct: 322 ILLTSSCSFPIRDGLLMSSAKVNS 251
>gb|AV922397.1|AV922397 AV922397 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags18a18 3', mRNA sequence
Length = 718
Score = 79.9 bits (168), Expect(2) = 1e-019
Identities = 31/86 (36%), Positives = 46/86 (53%)
Frame = +2 / -2
Query: 1052 HPEIQQKLRQELDTVLGPGHQITEPDTHNLPYLQAVIKETLRLRMAIPLLVPHMNLHDAK 1231
HP + K + + G Q+ D L YL+ V+ ET R+ +LVP + +
Sbjct: 717 HPRVLHKAQAXVRAAAGGAPQVRISDMPKLKYLRMVLSETFRMHPPATMLVPRETMRPIR 538
Query: 1232 LGGYDIPAESKILVNAWYLANNPDSW 1309
LGGYDIPA + ++VNAW + +P SW
Sbjct: 537 LGGYDIPANTMLMVNAWAIGRDPASW 460
Score = 37.3 bits (75), Expect(2) = 1e-019
Identities = 17/53 (32%), Positives = 20/53 (37%)
Frame = +2 / -2
Query: 1361 VEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQDKVD 1519
V+ NG + LPFG GRR CP L+ F P G D
Sbjct: 414 VDFNGGHYELLPFGAGRRICPGLAMGVANTEFILANLLYCFNWALPQGMRSED 256
>gb|BJ466913.1|BJ466913 BJ466913 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags35a04 3', mRNA sequence
Length = 719
Score = 79.9 bits (168), Expect(2) = 1e-019
Identities = 31/86 (36%), Positives = 46/86 (53%)
Frame = +2 / -2
Query: 1052 HPEIQQKLRQELDTVLGPGHQITEPDTHNLPYLQAVIKETLRLRMAIPLLVPHMNLHDAK 1231
HP + K + + G Q+ D L YL+ V+ ET R+ +LVP + +
Sbjct: 718 HPRVLHKAQAXVRAAAGGAPQVRISDMPKLKYLRMVLSETFRMHPPATMLVPRETMRPIR 539
Query: 1232 LGGYDIPAESKILVNAWYLANNPDSW 1309
LGGYDIPA + ++VNAW + +P SW
Sbjct: 538 LGGYDIPANTMLMVNAWAIGRDPASW 461
Score = 37.3 bits (75), Expect(2) = 1e-019
Identities = 17/53 (32%), Positives = 20/53 (37%)
Frame = +2 / -2
Query: 1361 VEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQDKVD 1519
V+ NG + LPFG GRR CP L+ F P G D
Sbjct: 415 VDFNGGHYELLPFGAGRRICPGLAMGVANTEFILANLLYCFNWALPQGMRSED 257
>gb|AV914567.1|AV914567 AV914567 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags6p16 5', mRNA sequence
Length = 618
Score = 83.5 bits (176), Expect(2) = 2e-019
Identities = 29/65 (44%), Positives = 46/65 (70%)
Frame = +2 / +1
Query: 1115 ITEPDTHNLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWYLAN 1294
+T+ D H LPYL+AVIKETLRL M PL+VPH+++ + + GY IP+ ++ +N + +
Sbjct: 313 VTQDDLHGLPYLKAVIKETLRLHMPGPLMVPHLSMDECIINGYTIPSGTRTFINTYAIQR 492
Query: 1295 NPDSW 1309
+P +W
Sbjct: 493 DPSNW 507
Score = 34.5 bits (69), Expect(2) = 0.001
Identities = 21/46 (45%), Positives = 27/46 (58%)
Frame = -1 / -2
Query: 1275 LTRILLSAGMSXPPSLASWRFMCGTSSGMAIRSRSVSLITACR*GR 1138
L ++ + G+ P + S GT SG + SRSVSLITA R*GR
Sbjct: 473 LMKVRVPDGIV*PFMMHSSMERWGTMSGPGM*SRSVSLITAFR*GR 336
Score = 33.1 bits (66), Expect(2) = 2e-019
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +2 / +1
Query: 1361 VEANGNDFRYLPFGVGRR 1414
++ GNDF+Y PFG GRR
Sbjct: 565 MDYKGNDFQYFPFGSGRR 618
Score = 28.1 bits (55), Expect(2) = 0.001
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -1 / -2
Query: 1413 LRPTPKGRYLKSLPL 1369
LRP P G+Y KS PL
Sbjct: 617 LRPDPNGKYWKSFPL 573
>gb|CA013705.1|CA013705 HT09E03r HT Hordeum vulgare subsp. vulgare cDNA clone HT09E03
5-PRIME, mRNA sequence
Length = 609
Score = 65.2 bits (136), Expect(3) = 2e-019
Identities = 32/81 (39%), Positives = 43/81 (53%)
Frame = +2 / +2
Query: 959 DNVLFIVENINVAAIETTLWSIEWAVAELVNHPEIQQKLRQELDTVLGPGHQITEPDTHN 1138
D + ++ +I A ET ++EWA+AELV +P K E+ G + E D
Sbjct: 11 DAIKSVIMDILGAGSETAATTLEWAMAELVKNPRAMHKATAEVRRAFHAGGTVAEQDLTE 190
Query: 1139 LPYLQAVIKETLRLRMAIPLL 1201
L YL+ VI ETLRL IPLL
Sbjct: 191 LAYLRLVIWETLRLHPPIPLL 253
Score = 36.8 bits (74), Expect(2) = 8e-005
Identities = 27/72 (37%), Positives = 34/72 (47%)
Frame = -1 / -1
Query: 1200 SSGMAIRSRSVSLITACR*GRLCVSGSVIWWPGPSTVSSSCRSFCWISGWFTSSATAHSI 1021
SSGM SR+VS +T R S S P +S + C G+ TSSA AHS
Sbjct: 252 SSGMGGCSRNVSQMTRRRYASSVRSCSATVPPAWKARRTSAVALCMALGFLTSSAMAHSS 73
Query: 1020 DHSVVSIAATLM 985
+ VS+ A M
Sbjct: 72 VVAAVSLPAPNM 37
Score = 34.5 bits (69), Expect(3) = 2e-019
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +2 / +2
Query: 1238 GYDIPAESKILVNAWYLANNPDSW 1309
GYD+P +++LVNAW L + W
Sbjct: 287 GYDVPRGTQVLVNAWALGRDERYW 358
Score = 34.1 bits (68), Expect(3) = 2e-019
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +2 / +2
Query: 1361 VEANGNDFRYLPFGVGRRSCP 1423
V+ DF +LPFG GRR CP
Sbjct: 410 VDLGAVDFVFLPFGAGRRMCP 472
Score = 33.6 bits (67), Expect(2) = 8e-005
Identities = 20/64 (31%), Positives = 28/64 (43%)
Frame = -1 / -1
Query: 1551 WRLNWPPFSVVSTLSCPGGGSSSKFWTRRPMVMPRMGRARMIPGQLLRPTPKGRYLKSLP 1372
+RL P + V + S SK+ ++ + IPG +LRP P GR KS
Sbjct: 600 FRLAVRPNASVMSTFAEHAHSQSKWKSKLASGSSTLATPNAIPGHILRPAPNGRNTKSTA 421
Query: 1371 LAST 1360
ST
Sbjct: 420 PKST 409
>gb|AV920965.1|AV920965 AV920965 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags16e06 3', mRNA sequence
Length = 594
Score = 68.9 bits (144), Expect(2) = 5e-019
Identities = 26/51 (50%), Positives = 37/51 (72%)
Frame = +2 / -2
Query: 1157 VIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWYLANNPDSW 1309
VIKETLRL M PLLVPH+ + D + GY IP+ ++++VN+ +A +P SW
Sbjct: 593 VIKETLRLHMPAPLLVPHLAMADCVINGYTIPSGTRVIVNSRAIARDPSSW 441
Score = 49.2 bits (101), Expect(2) = 4e-007
Identities = 20/45 (44%), Positives = 26/45 (57%)
Frame = -1 / +1
Query: 1503 PGGGSSSKFWTRRPMVMPRMGRARMIPGQLLRPTPKGRYLKSLPL 1369
PGG SK++TR ++ A+ IPG +LRP P GR K PL
Sbjct: 241 PGGSFQSKWYTRLASMISMAAMAKFIPGHILRPVPNGR*RKPFPL 375
Score = 46.4 bits (95), Expect(2) = 5e-019
Identities = 19/48 (39%), Positives = 23/48 (47%)
Frame = +2 / -2
Query: 1361 VEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPG 1504
++ GN F YLPFG GRR CP LV +F+ PPG
Sbjct: 383 MDYKGNGFLYLPFGTGRRICPGINFAIAAIEIMLANLVYHFDWKLPPG 240
Score = 25.8 bits (50), Expect(2) = 4e-007
Identities = 17/40 (42%), Positives = 20/40 (50%)
Frame = -1 / +1
Query: 1275 LTRILLSAGMSXPPSLASWRFMCGTSSGMAIRSRSVSLIT 1156
LT + GM P S GT SG + SRSVSL+T
Sbjct: 475 LTMTRVPDGMV*PFMTQSAMARWGTRSGAGM*SRSVSLMT 594
>gb|AV934098.1|AV934098 AV934098 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal11a04 5', mRNA sequence
Length = 638
Score = 84.5 bits (178), Expect(2) = 7e-019
Identities = 31/65 (47%), Positives = 46/65 (70%)
Frame = +2 / +3
Query: 1115 ITEPDTHNLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWYLAN 1294
I+E D +N+ YL+AVIKE+LRL PLL PH+ + D + GY +PA ++++VNAW +
Sbjct: 339 ISETDMNNMTYLRAVIKESLRLHPVAPLLAPHLAMADCIIDGYIVPAGTRVVVNAWAIGR 518
Query: 1295 NPDSW 1309
+P SW
Sbjct: 519 DPSSW 533
Score = 30.4 bits (60), Expect(2) = 7e-019
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +2 / +1
Query: 1358 HVEANGNDFRYLPFG 1402
H+ GNDF++LPFG
Sbjct: 589 HINFKGNDFQFLPFG 633
>gb|CA020031.1|CA020031 HV14C06r HV Hordeum vulgare subsp. vulgare cDNA clone HV14C06
5-PRIME, mRNA sequence
Length = 453
Score = 95.5 bits (202), Expect = 8e-019
Identities = 41/108 (37%), Positives = 62/108 (57%)
Frame = +2 / +2
Query: 986 INVAAIETTLWSIEWAVAELVNHPEIQQKLRQELDTVLGPGHQITEPDTHNLPYLQAVIK 1165
IN+AA++ + EWA+AE+V +PE+ + +ELD V+G + E D L Y++A I+
Sbjct: 107 INLAAVDNPSNAAEWALAEMVKNPELLGRAAEELDRVVGRERXVQESDIPQLNYVKACIR 286
Query: 1166 ETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWYLANNPDSW 1309
E RL P VPH+ L D + GY +P S +L++ L NP W
Sbjct: 287 EAFRLHPIAPFNVPHVALADTVVAGYRVPKGSHVLLSRLGLGRNPAIW 430
Score = 37.7 bits (76), Expect = 0.20
Identities = 26/76 (34%), Positives = 31/76 (40%)
Frame = -3 / -3
Query: 1252 GDVVXAELGVVEVHVRHQQRDGHPQPQRLLDHRLQVGEXXXXXXXXXXXRPEHRVXXXXX 1073
G V + GV E VRH + Q +RL D L V E P H V
Sbjct: 373 GHAVAGDDGVGEGDVRHVEGGDGVQSERLPDAGLDVVELGDVRLLHLXLPPHHPVQLLRR 194
Query: 1072 XXXXLRVVHQLSDRPL 1025
LR++H L RPL
Sbjct: 193 PPQQLRILHHLRQRPL 146
Score = 33.1 bits (66), Expect = 4.8
Identities = 19/39 (48%), Positives = 24/39 (61%)
Frame = -1 / -1
Query: 1101 PSTVSSSCRSFCWISGWFTSSATAHSIDHSVVSIAATLM 985
P+T SSS + SG+FT SA+AHS +S AA LM
Sbjct: 222 PTTRSSSSAARPSSSGFFTISASAHSAALDGLSTAARLM 106
>gb|CB880227.1|CB880227 HM05O04w HM Hordeum vulgare subsp. vulgare cDNA clone HM05O04
3-PRIME, mRNA sequence
Length = 604
Score = 77.1 bits (162), Expect(2) = 2e-018
Identities = 28/61 (45%), Positives = 42/61 (68%)
Frame = +2 / -2
Query: 1127 DTHNLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWYLANNPDS 1306
D L +L+ V+KETLRL P+L+P + D ++GGYD+PA+++I VNAW + +P S
Sbjct: 585 DLAKLGHLKMVVKETLRLHPPAPMLLPREAMRDIQIGGYDVPAKTRIYVNAWAIGRDPTS 406
Query: 1307 W 1309
W
Sbjct: 405 W 403
Score = 36.3 bits (73), Expect(2) = 2e-018
Identities = 14/48 (29%), Positives = 18/48 (37%)
Frame = +2 / -2
Query: 1361 VEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPG 1504
++ G F PFG GRR CP L+ F+ P G
Sbjct: 354 IDFKGTHFELTPFGAGRRICPALSMSTATVEFTLANLLYRFQWTLPEG 211
>gb|AV918446.1|AV918446 AV918446 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags21b10 3', mRNA sequence
Length = 604
Score = 73.0 bits (153), Expect(2) = 2e-018
Identities = 28/54 (51%), Positives = 40/54 (74%)
Frame = +2 / -2
Query: 1148 LQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWYLANNPDSW 1309
L+AVIKETLRL M PLLVPH+ + D + GY IP+ ++++VN+ +A +P SW
Sbjct: 603 LKAVIKETLRLHMPAPLLVPHLAMADCVINGYTIPSGTRVIVNSRAIARDPSSW 442
Score = 44.6 bits (91), Expect(2) = 1e-006
Identities = 19/45 (42%), Positives = 25/45 (55%)
Frame = -1 / +2
Query: 1503 PGGGSSSKFWTRRPMVMPRMGRARMIPGQLLRPTPKGRYLKSLPL 1369
P SS K++TR ++ A+ IPG +LRP P GR K PL
Sbjct: 242 PVAASSMKWYTRLASMISMAAMAKFIPGHILRPVPNGR*RKPFPL 376
Score = 40.0 bits (81), Expect(2) = 2e-018
Identities = 17/43 (39%), Positives = 20/43 (46%)
Frame = +2 / -2
Query: 1361 VEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFEL 1489
++ GN F YLPFG GRR CP LV +F L
Sbjct: 384 MDYKGNGFLYLPFGTGRRICPGINFAIAAIEIMLANLVYHFIL 256
Score = 29.0 bits (57), Expect(2) = 1e-006
Identities = 19/43 (44%), Positives = 22/43 (51%)
Frame = -1 / +2
Query: 1275 LTRILLSAGMSXPPSLASWRFMCGTSSGMAIRSRSVSLITACR 1147
LT + GM P S GT SG + SRSVSL+TA R
Sbjct: 476 LTMTRVPDGMV*PFMTQSAMARWGTRSGAGM*SRSVSLMTAFR 604
>gb|BF631513.2|BF631513 HVSMEb0016D19f Hordeum vulgare seedling shoot EST library HVcDNA0002
(Dehydration stress) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEb0016D19f, mRNA sequence
Length = 823
Score = 93.2 bits (197), Expect = 4e-018
Identities = 40/116 (34%), Positives = 63/116 (54%)
Frame = +2 / +2
Query: 959 DNVLFIVENINVAAIETTLWSIEWAVAELVNHPEIQQKLRQELDTVLGPGHQITEPDTHN 1138
D+ I+ + +AA +T+ S W + EL+ HP + K + E+ G Q+ D
Sbjct: 386 DHAKSILFDTFMAATDTSSISSYWVMTELIRHPRVLHKAQAEVRAAAGGAPQVRISDMPK 565
Query: 1139 LPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWYLANNPDS 1306
L YL+ V+ ET R+ +LVP + +LGGYDIPA + ++VNAW + +P S
Sbjct: 566 LKYLRMVLSETFRMHPPGTMLVPRETMRPIRLGGYDIPANTMLMVNAWAIGRDPAS 733
>gb|BE216646.1|BE216646 HV_CEb0011B08f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0011B08f, mRNA sequence
Length = 994
Score = 47.8 bits (98), Expect(4) = 6e-018
Identities = 17/37 (45%), Positives = 25/37 (67%)
Frame = +2 / +2
Query: 1115 ITEPDTHNLPYLQAVIKETLRLRMAIPLLVPHMNLHD 1225
+ EPD +L YLQAV+KE +RL P+++PH + D
Sbjct: 98 LEEPDAASLQYLQAVVKEVMRLHPVAPIMLPHQAVED 208
Score = 40.0 bits (81), Expect(4) = 6e-018
Identities = 18/50 (36%), Positives = 22/50 (44%)
Frame = +2 / +2
Query: 1355 KHVEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPG 1504
K VE G D+ ++PFG GRR CP L+ FE P G
Sbjct: 347 KAVEFRGKDYEFIPFGSGRRLCPGLPMAERVVPFVLASLLHAFEWRLPDG 496
Score = 34.1 bits (68), Expect(4) = 6e-018
Identities = 8/27 (29%), Positives = 18/27 (66%)
Frame = +2 / +2
Query: 1229 KLGGYDIPAESKILVNAWYLANNPDSW 1309
++GG+ +P +S ++ N W + +P +W
Sbjct: 215 EIGGFAVPRDSTVIFNVWAIMRDPAAW 295
Score = 31.8 bits (63), Expect(2) = 3.5
Identities = 18/40 (45%), Positives = 19/40 (47%)
Frame = -1 / -2
Query: 1239 PPSLASWRFMCGTSSGMAIRSRSVSLITACR*GRLCVSGS 1120
P S S CG+ G SR S TACR RL SGS
Sbjct: 222 PISTPSSTAWCGSMIGATGCSRITSFTTACRYCRLAASGS 103
Score = 24.0 bits (46), Expect(4) = 6e-018
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +2 / +2
Query: 1046 VNHPEIQQKLRQELDTVLG 1102
+ HP K+R E++ VLG
Sbjct: 23 LRHPRAMAKVRAEMEDVLG 79
Score = 23.1 bits (44), Expect(2) = 3.5
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -1 / -2
Query: 1425 PGQLLRPTPKGRYLKSLPLAST 1360
PG RP P G SLP ST
Sbjct: 417 PGHSRRPDPNGMNS*SLPRNST 352
>gb|BJ460485.1|BJ460485 BJ460485 K. Sato unpublished cDNA library, cv. Akashinriki vegetative
stage leaves Hordeum vulgare subsp. vulgare cDNA clone
baak40p23 3', mRNA sequence
Length = 461
Score = 76.2 bits (160), Expect(2) = 9e-018
Identities = 28/58 (48%), Positives = 43/58 (74%)
Frame = +2 / -2
Query: 1136 NLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWYLANNPDSW 1309
+L YL++VIKETLRL M PLLVPH+++ + + G IP+ ++++N+W LA +P SW
Sbjct: 457 SLAYLKSVIKETLRLHMXGPLLVPHLSMAECNVNGXIIPSGIRVIINSWALARDPGSW 284
Score = 37.3 bits (75), Expect(2) = 1e-005
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = -1 / +3
Query: 1437 ARMIPGQLLRPTPKGRYLKSLPL 1369
A++IPGQ+LRP P G KS PL
Sbjct: 150 AKLIPGQILRPVPNGXXEKSXPL 218
Score = 35.0 bits (70), Expect(2) = 9e-018
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = +2 / -2
Query: 1373 GNDFRYLPFGVGRRSCP 1423
GNDF PFG GRR CP
Sbjct: 214 GNDFSXXPFGTGRRICP 164
Score = 32.7 bits (65), Expect(2) = 1e-005
Identities = 23/52 (44%), Positives = 27/52 (51%)
Frame = -1 / +3
Query: 1290 ARYQALTRILLSAGMSXPPSLASWRFMCGTSSGMAIRSRSVSLITACR*GRL 1135
AR Q L + G+ P +L S GT SG I S SVSLIT R +L
Sbjct: 303 ARAQLLMMTRIPDGIMXPXTLHSAMERWGTRSGPXIWSLSVSLITDFRYAKL 458
>gb|BF627303.3|BF627303 HVSMEb0004I01f Hordeum vulgare seedling shoot EST library HVcDNA0002
(Dehydration stress) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEb0004I01f, mRNA sequence
Length = 741
Score = 73.5 bits (154), Expect(2) = 1e-017
Identities = 29/76 (38%), Positives = 42/76 (55%)
Frame = +2 / +2
Query: 1082 ELDTVLGPGHQITEPDTHNLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAES 1261
E+ G Q+ D L YL+ V+ ET R+ +LVP + +LGGYDIPA +
Sbjct: 8 EVRAAAGGAPQVRISDMPKLKYLRMVLSETFRMHPPATMLVPRETMRPIRLGGYDIPANT 187
Query: 1262 KILVNAWYLANNPDSW 1309
++VNAW + +P SW
Sbjct: 188 MLMVNAWAIGRDPASW 235
Score = 37.3 bits (75), Expect(2) = 1e-017
Identities = 17/53 (32%), Positives = 20/53 (37%)
Frame = +2 / +2
Query: 1361 VEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQDKVD 1519
V+ NG + LPFG GRR CP L+ F P G D
Sbjct: 281 VDFNGGHYELLPFGAGRRICPGLAMGVANTEFILANLLYCFNWALPQGMRSED 439
>gb|BE213800.1|BE213800 HV_CEb0001F01f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0001F01f, mRNA sequence
Length = 956
Score = 83.5 bits (176), Expect(2) = 2e-017
Identities = 36/89 (40%), Positives = 56/89 (62%)
Frame = +2 / +3
Query: 935 QQKGEINEDNVLFIVENINVAAIETTLWSIEWAVAELVNHPEIQQKLRQELDTVLGPGHQ 1114
Q+ ++ D + ++ ++ A TT IEW + +L+ +PE+ +K+++EL TVLG
Sbjct: 174 QEGSLLSHDVMRALLSDLYGAGASTTAALIEWGMVDLLQNPEVMRKVKEELTTVLGEKPL 353
Query: 1115 ITEPDTHNLPYLQAVIKETLRLRMAIPLL 1201
+ E D LPYLQAV KE LRLRM +PL+
Sbjct: 354 MEESDIGRLPYLQAVAKEILRLRMVVPLV 440
Score = 26.7 bits (52), Expect(2) = 2e-017
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = +2 / +2
Query: 1250 PAESKILVNAWYLANNPDSW 1309
P + +++NAW + N D+W
Sbjct: 485 P*STNVILNAWAINRNADAW 544
>gb|CV056681.1|CV056681 BNEL1E1 Barley EST endosperm library Hordeum vulgare subsp. vulgare
cDNA clone BNEL1E1 5' similar to ent-kaurene oxidase,
mRNA sequence
Length = 627
Score = 65.2 bits (136), Expect(2) = 2e-017
Identities = 27/65 (41%), Positives = 36/65 (55%)
Frame = +2 / +3
Query: 1115 ITEPDTHNLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWYLAN 1294
+TE LPYL AV ETLRL +PL+ P KL GYD+PA ++I++N +
Sbjct: 267 VTEDHVPRLPYLSAVFHETLRLHSPVPLVPPRFVHETTKLAGYDVPAGTEIVINLYGCNM 446
Query: 1295 NPDSW 1309
N W
Sbjct: 447 NKKDW 461
Score = 44.6 bits (91), Expect(2) = 2e-017
Identities = 18/51 (35%), Positives = 31/51 (60%)
Frame = +2 / +3
Query: 950 INEDNVLFIVENINVAAIETTLWSIEWAVAELVNHPEIQQKLRQELDTVLG 1102
+ ++ ++ +V + A +TTL + EWA+ EL +PE Q +L QE+ V G
Sbjct: 105 LTDEQLMMLVWEAVIEAADTTLVTTEWAMYELAKNPEKQDRLYQEIREVCG 257
Score = 27.2 bits (53), Expect(2) = 1.1
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = -3 / -2
Query: 1255 GGDVVXAELGVVEVHVRHQQRDGHPQPQRLLDHRLQV 1145
G DVV + G + Q D +P+RL++H +V
Sbjct: 407 GWDVVAGQFGGLMDEPWRHQWDRRMEPERLMEHGAEV 297
Score = 25.4 bits (49), Expect(2) = 1.1
Identities = 18/50 (36%), Positives = 22/50 (44%)
Frame = -1 / -3
Query: 1101 PSTVSSSCRSFCWISGWFTSSATAHSIDHSVVSIAATLMFSTMKSTLSSL 952
P T S S SG+ SS AHS+ VVS A+ T SS+
Sbjct: 256 PHTSRISW*SRSCFSGFLASSYIAHSVVTKVVSAASMTASHTSIINCSSV 107
>gb|AU252315.1|AU252315 AU252315 salt-stressed barley root cDNA Hordeum vulgare subsp.
vulgare cDNA clone BR-C08 similar to cytochrome P450
CYP99A1, mRNA sequence
Length = 540
Score = 71.2 bits (149), Expect(2) = 2e-017
Identities = 25/58 (43%), Positives = 41/58 (70%)
Frame = +2 / +1
Query: 1136 NLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWYLANNPDSW 1309
+L Y++ +IKET+RL +PLLVPH+ +GG++I +++LVNAW +A +P+ W
Sbjct: 13 DLHYIKMMIKETMRLNPVVPLLVPHLCRETCDVGGFEIKEGTRVLVNAWAMARSPEYW 186
Score = 38.6 bits (78), Expect(2) = 2e-017
Identities = 16/41 (39%), Positives = 18/41 (43%)
Frame = +2 / +1
Query: 1382 FRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPG 1504
F YLPFG GRR CP RL+ F+ P G
Sbjct: 253 FEYLPFGTGRRKCPGDTFGLATLDLIVARLLYYFDWSLPAG 375
Score = 26.3 bits (51), Expect(2) = 1.1
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = -1 / -2
Query: 1278 ALTRILLSAGMSXPPSLASWRFMCGTSSGMAIRSRSVSLI 1159
ALT+ L+ + +S PP+ R GTS+G + VSLI
Sbjct: 155 ALTKTLVPSLISNPPTSQVSRQR*GTSNGTTGFNLMVSLI 36
Score = 26.3 bits (51), Expect(2) = 1.1
Identities = 12/39 (30%), Positives = 16/39 (41%)
Frame = -1 / -2
Query: 1503 PGGGSSSKFWTRRPMVMPRMGRARMIPGQLLRPTPKGRY 1387
P G SK R + + + PG L P P G+Y
Sbjct: 374 PAGRLQSK**RSRATMRSSVASPNVSPGHFLLPVPNGKY 258
>gb|AV913057.1|AV913057 AV913057 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags11k05 5', mRNA sequence
Length = 567
Score = 90.4 bits (191), Expect = 3e-017
Identities = 38/113 (33%), Positives = 61/113 (53%)
Frame = +2 / +2
Query: 959 DNVLFIVENINVAAIETTLWSIEWAVAELVNHPEIQQKLRQELDTVLGPGHQITEPDTHN 1138
D+ I+ + +AA +T+ S W + EL+ HP + K + E+ G Q+ D
Sbjct: 227 DHAKSILFDTFMAATDTSSISSYWVMTELIRHPRVLHKAQAEVRAAAGGAPQVRISDMPK 406
Query: 1139 LPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWYLANN 1297
L YL+ V+ ET R+ +LVP + +LGGYDIPA + ++VNAW + +
Sbjct: 407 LKYLRMVLSETFRMHPPATMLVPRETMRPIRLGGYDIPANTMLMVNAWAIGRD 565
>gb|AV919240.1|AV919240 AV919240 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags5c10 3', mRNA sequence
Length = 669
Score = 72.1 bits (151), Expect(2) = 3e-017
Identities = 28/70 (40%), Positives = 40/70 (57%)
Frame = +2 / -1
Query: 1100 GPGHQITEPDTHNLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNA 1279
G Q+ D L YL+ V+ ET R+ +LVP + +LGGYDIPA + ++VNA
Sbjct: 669 GGAPQVRISDMPKLKYLRMVLSETFRMHPPATMLVPRETMRPIRLGGYDIPANTMLMVNA 490
Query: 1280 WYLANNPDSW 1309
W + +P SW
Sbjct: 489 WAIGRDPASW 460
Score = 37.3 bits (75), Expect(2) = 3e-017
Identities = 17/53 (32%), Positives = 20/53 (37%)
Frame = +2 / -1
Query: 1361 VEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQDKVD 1519
V+ NG + LPFG GRR CP L+ F P G D
Sbjct: 414 VDFNGGHYELLPFGAGRRICPGLAMGVANTEFILANLLYCFNWALPQGMRSED 256
>gb|AV922497.1|AV922497 AV922497 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags18g21 3', mRNA sequence
Length = 670
Score = 72.1 bits (151), Expect(2) = 3e-017
Identities = 28/70 (40%), Positives = 40/70 (57%)
Frame = +2 / -1
Query: 1100 GPGHQITEPDTHNLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNA 1279
G Q+ D L YL+ V+ ET R+ +LVP + +LGGYDIPA + ++VNA
Sbjct: 670 GGAPQVRISDMPKLKYLRMVLSETFRMHPPATMLVPRETMRPIRLGGYDIPANTMLMVNA 491
Query: 1280 WYLANNPDSW 1309
W + +P SW
Sbjct: 490 WAIGRDPASW 461
Score = 37.3 bits (75), Expect(2) = 3e-017
Identities = 17/53 (32%), Positives = 20/53 (37%)
Frame = +2 / -1
Query: 1361 VEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQDKVD 1519
V+ NG + LPFG GRR CP L+ F P G D
Sbjct: 415 VDFNGGHYELLPFGAGRRICPGLAMGVANTEFILANLLYCFNWALPQGMRSED 257
>gb|BQ767980.1|BQ767980 EBro08_SQ010_I12_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ010_I12 5', mRNA sequence
Length = 420
Score = 90.0 bits (190), Expect = 4e-017
Identities = 34/41 (82%), Positives = 37/41 (90%)
Frame = -1 / -1
Query: 1596 *SVLGLHTMVECFKMWRLNWPPFSVVSTLSCPGGGSSSKFW 1474
*+ LGL TMVECFKMWRLNWPPFSVVS+LS PGGG S+KFW
Sbjct: 123 *NTLGLATMVECFKMWRLNWPPFSVVSSLSWPGGGESTKFW 1
Score = 89.0 bits (188), Expect = 7e-017
Identities = 37/55 (67%), Positives = 39/55 (70%)
Frame = +2 / +2
Query: 1475 QNFELLPPPGQDKVDTTEKGGQFSLHILKHSTIVCKPRTL*EQPTRRFHAEQSNV 1639
QNF L PPPGQDK+DTTEKGGQFSLHILKHSTIV KPR * R S +
Sbjct: 2 QNFVLSPPPGQDKLDTTEKGGQFSLHILKHSTIVAKPRVF*SSGVRALGVRASGI 166
Score = 59.3 bits (123), Expect = 7e-008
Identities = 24/45 (53%), Positives = 26/45 (57%)
Frame = +1 / +1
Query: 1477 ELXXXXXXXXGQGXHHREGRPVQSPHLEAFHHRVQAKNALRAAHT 1611
EL GQ HH EGRPVQ PHLEA HHR QA++ L T
Sbjct: 4 ELRALAAARPGQARHHGEGRPVQPPHLEALHHRGQAQSVLEQRRT 138
Score = 52.8 bits (109), Expect = 6e-006
Identities = 18/26 (69%), Positives = 19/26 (73%)
Frame = -2 / -2
Query: 1583 ACTRWWNASRCGD*TGLPSRWCXPCP 1506
A RWW+ASRCG *TG PS WC CP
Sbjct: 110 AWPRWWSASRCGG*TGRPSPWCRACP 33
Score = 48.7 bits (100), Expect = 1e-004
Identities = 24/48 (50%), Positives = 29/48 (60%)
Frame = -3 / -3
Query: 1618 EPTCGLLLKRSWLAHDGGMLQDVETELASXXXXXXXXLPGRRQQLEVL 1475
E T L+ S L HDGG+LQDVE ELA+ L GRR++ EVL
Sbjct: 145 ESTYAAALEHSGLGHDGGVLQDVEAELAALLRGVELVLAGRRREHEVL 2
>gb|BF259778.3|BF259778 HVSMEf0020D20f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEf0020D20f, mRNA sequence
Length = 675
Score = 69.3 bits (145), Expect(2) = 4e-017
Identities = 26/71 (36%), Positives = 41/71 (57%)
Frame = +2 / +1
Query: 1097 LGPGHQITEPDTHNLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVN 1276
+G Q+ E D L YLQA++KET RL P L+PH+ ++ GY +P +++LVN
Sbjct: 1 IGSKEQVEESDIGQLKYLQAIVKETFRLHPPAPFLLPHVAETTTQVQGYTVPKGTRLLVN 180
Query: 1277 AWYLANNPDSW 1309
W + ++ W
Sbjct: 181 VWAIGHDGKVW 213
Score = 39.6 bits (80), Expect(2) = 4e-017
Identities = 18/53 (33%), Positives = 22/53 (41%)
Frame = +2 / +1
Query: 1355 KHVEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQDK 1513
K V+ G DF LPFG GRR CP L+ F+ P +K
Sbjct: 253 KEVDFKGRDFELLPFGSGRRMCPGTPLAVRIVHLMLASLLHRFQWRLPVDVEK 411
Score = 38.6 bits (78), Expect(2) = 0.020
Identities = 17/31 (54%), Positives = 19/31 (61%)
Frame = -1 / -2
Query: 1446 MGRARMIPGQLLRPTPKGRYLKSLPLASTCF 1354
M A +PG +L P PKGR KS PL ST F
Sbjct: 344 MRTASGVPGHILLPDPKGRSSKSRPLKSTSF 252
Score = 23.5 bits (45), Expect(2) = 0.020
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -3 / -1
Query: 1213 HVRHQQRDGHPQPQRLLDHRLQVGE 1139
HVR Q+ +P+RLL L+V E
Sbjct: 117 HVRQQEWCRRMEPERLLHDGLEVLE 43
>gb|CV060077.1|CV060077 BNEL54b3 Barley EST endosperm library Hordeum vulgare subsp. vulgare
cDNA clone BNEL54b3 5' similar to ent-kaurene oxidase,
mRNA sequence
Length = 589
Score = 64.3 bits (134), Expect(2) = 4e-017
Identities = 27/65 (41%), Positives = 36/65 (55%)
Frame = +2 / +3
Query: 1115 ITEPDTHNLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWYLAN 1294
+TE LPYL AV ETLRL +PL+ P KL GYD+PA ++I++N +
Sbjct: 267 VTEDHVPRLPYLSAVFHETLRLHSPVPLVPPRFVHETTKLAGYDVPAGTEIVINLYGCNM 446
Query: 1295 NPDSW 1309
N W
Sbjct: 447 NKMDW 461
Score = 44.6 bits (91), Expect(2) = 4e-017
Identities = 18/51 (35%), Positives = 31/51 (60%)
Frame = +2 / +3
Query: 950 INEDNVLFIVENINVAAIETTLWSIEWAVAELVNHPEIQQKLRQELDTVLG 1102
+ ++ ++ +V + A +TTL + EWA+ EL +PE Q +L QE+ V G
Sbjct: 105 LTDEQLMMLVWEAVIEAADTTLVTTEWAMYELAKNPEKQDRLYQEIREVCG 257
Score = 27.2 bits (53), Expect(2) = 1.1
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = -3 / -3
Query: 1255 GGDVVXAELGVVEVHVRHQQRDGHPQPQRLLDHRLQV 1145
G DVV + G + Q D +P+RL++H +V
Sbjct: 407 GWDVVAGQFGGLMDEPWRHQWDRRMEPERLMEHGAEV 297
Score = 25.4 bits (49), Expect(2) = 1.1
Identities = 18/50 (36%), Positives = 22/50 (44%)
Frame = -1 / -1
Query: 1101 PSTVSSSCRSFCWISGWFTSSATAHSIDHSVVSIAATLMFSTMKSTLSSL 952
P T S S SG+ SS AHS+ VVS A+ T SS+
Sbjct: 256 PHTSRISW*SRSCFSGFLASSYIAHSVVTKVVSAASMTASHTSIINCSSV 107
>gb|BE195199.3|BE195199 HVSMEh0088J02f Hordeum vulgare 5-45 DAP spike EST library HVcDNA0009
(5 to 45 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEh0088J02f, mRNA sequence
Length = 624
Score = 57.0 bits (118), Expect(3) = 6e-017
Identities = 27/59 (45%), Positives = 32/59 (54%)
Frame = +2 / +2
Query: 1025 EWAVAELVNHPEIQQKLRQELDTVLGPGHQITEPDTHNLPYLQAVIKETLRLRMAIPLL 1201
EWA+AELV +P K E+ G + E D L YL+ VI ETLRL IPLL
Sbjct: 2 EWAMAELVKNPRAMHKATAEVRRAFHAGGTVAEQDLTELAYLRLVIWETLRLHPPIPLL 178
Score = 34.5 bits (69), Expect(3) = 6e-017
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +2 / +2
Query: 1238 GYDIPAESKILVNAWYLANNPDSW 1309
GYD+P +++LVNAW L + W
Sbjct: 212 GYDVPRGTQVLVNAWALGRDERYW 283
Score = 34.1 bits (68), Expect(3) = 6e-017
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +2 / +2
Query: 1361 VEANGNDFRYLPFGVGRRSCP 1423
V+ DF +LPFG GRR CP
Sbjct: 335 VDLGAVDFVFLPFGAGRRMCP 397
Score = 33.6 bits (67), Expect(2) = 0.046
Identities = 23/59 (38%), Positives = 28/59 (47%)
Frame = -1 / -1
Query: 1200 SSGMAIRSRSVSLITACR*GRLCVSGSVIWWPGPSTVSSSCRSFCWISGWFTSSATAHS 1024
SSGM SR+VS +T R S S P +S + C G+ TSSA AHS
Sbjct: 177 SSGMGGCSRNVSQMTRRRYASSVRSCSATVPPAWKARRTSAVALCMALGFLTSSAMAHS 1
Score = 27.2 bits (53), Expect(2) = 0.046
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = -1 / -1
Query: 1428 IPGQLLRPTPKGRYLKSLPLAST 1360
I G +LRP P GR KS ST
Sbjct: 402 IXGHILRPAPNGRNTKSTAPKST 334
>gb|AV919113.1|AV919113 AV919113 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags4j07 3', mRNA sequence
Length = 646
Score = 69.8 bits (146), Expect(2) = 1e-016
Identities = 26/61 (42%), Positives = 37/61 (60%)
Frame = +2 / -3
Query: 1127 DTHNLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWYLANNPDS 1306
D L YL+ V+ ET R+ +LVP + +LGGYDIPA + ++VNAW + +P S
Sbjct: 605 DMPKLKYLRMVLSETFRMHPPATMLVPRETMRPIRLGGYDIPANTMLMVNAWAIGRDPAS 426
Query: 1307 W 1309
W
Sbjct: 425 W 423
Score = 37.3 bits (75), Expect(2) = 1e-016
Identities = 17/53 (32%), Positives = 20/53 (37%)
Frame = +2 / -3
Query: 1361 VEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQDKVD 1519
V+ NG + LPFG GRR CP L+ F P G D
Sbjct: 377 VDFNGGHYELLPFGAGRRICPGLAMGVANTEFILANLLYCFNWALPQGMRSED 219
>gb|AV917809.1|AV917809 AV917809 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags11k05 3', mRNA sequence
Length = 630
Score = 69.8 bits (146), Expect(2) = 1e-016
Identities = 26/61 (42%), Positives = 37/61 (60%)
Frame = +2 / -1
Query: 1127 DTHNLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWYLANNPDS 1306
D L YL+ V+ ET R+ +LVP + +LGGYDIPA + ++VNAW + +P S
Sbjct: 606 DMPKLKYLRMVLSETFRMHPPATMLVPRETMRPIRLGGYDIPANTMLMVNAWAIGRDPAS 427
Query: 1307 W 1309
W
Sbjct: 426 W 424
Score = 37.3 bits (75), Expect(2) = 1e-016
Identities = 17/53 (32%), Positives = 20/53 (37%)
Frame = +2 / -1
Query: 1361 VEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQDKVD 1519
V+ NG + LPFG GRR CP L+ F P G D
Sbjct: 378 VDFNGGHYELLPFGAGRRICPGLAMGVANTEFILANLLYCFNWALPQGMRSED 220
>gb|AV918673.1|AV918673 AV918673 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags21n09 3', mRNA sequence
Length = 583
Score = 60.6 bits (126), Expect(2) = 1e-016
Identities = 22/47 (46%), Positives = 33/47 (70%)
Frame = +2 / -3
Query: 1169 TLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWYLANNPDSW 1309
TLRL M PLLVPH+ + D + GY IP+ ++++VN+ +A +P SW
Sbjct: 581 TLRLHMPAPLLVPHLAMADCVINGYTIPSGTRVIVNSRAIARDPSSW 441
Score = 49.2 bits (101), Expect = 7e-005
Identities = 20/45 (44%), Positives = 26/45 (57%)
Frame = -1 / +1
Query: 1503 PGGGSSSKFWTRRPMVMPRMGRARMIPGQLLRPTPKGRYLKSLPL 1369
PGG SK++TR ++ A+ IPG +LRP P GR K PL
Sbjct: 241 PGGSFQSKWYTRLASMISMAAMAKFIPGHILRPVPNGR*RKPFPL 375
Score = 46.4 bits (95), Expect(2) = 1e-016
Identities = 19/48 (39%), Positives = 23/48 (47%)
Frame = +2 / -3
Query: 1361 VEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPG 1504
++ GN F YLPFG GRR CP LV +F+ PPG
Sbjct: 383 MDYKGNGFLYLPFGTGRRICPGINFAIAAIEIMLANLVYHFDWKLPPG 240
>gb|AV913374.1|AV913374 AV913374 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags21n09 5', mRNA sequence
Length = 522
Score = 60.6 bits (126), Expect(2) = 1e-016
Identities = 22/47 (46%), Positives = 33/47 (70%)
Frame = +2 / +1
Query: 1169 TLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWYLANNPDSW 1309
TLRL M PLLVPH+ + D + GY IP+ ++++VN+ +A +P SW
Sbjct: 13 TLRLHMPAPLLVPHLAMADCVINGYTIPSGTRVIVNSRAIARDPSSW 153
Score = 49.2 bits (101), Expect = 7e-005
Identities = 20/45 (44%), Positives = 26/45 (57%)
Frame = -1 / -2
Query: 1503 PGGGSSSKFWTRRPMVMPRMGRARMIPGQLLRPTPKGRYLKSLPL 1369
PGG SK++TR ++ A+ IPG +LRP P GR K PL
Sbjct: 353 PGGSFQSKWYTRLASMISMAAMAKFIPGHILRPVPNGR*RKPFPL 219
Score = 46.4 bits (95), Expect(2) = 1e-016
Identities = 19/48 (39%), Positives = 23/48 (47%)
Frame = +2 / +1
Query: 1361 VEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPG 1504
++ GN F YLPFG GRR CP LV +F+ PPG
Sbjct: 211 MDYKGNGFLYLPFGTGRRICPGINFAIAAIEIMLANLVYHFDWKLPPG 354
>gb|BM100938.2|BM100938 EBpi01_SQ002_G18_R pistil, 1 DPA, no treatment, cv Optic, EBpi01
Hordeum vulgare subsp. vulgare cDNA clone
EBpi01_SQ002_G18 5', mRNA sequence
Length = 365
Score = 65.2 bits (136), Expect(2) = 1e-016
Identities = 27/65 (41%), Positives = 36/65 (55%)
Frame = +2 / +1
Query: 1115 ITEPDTHNLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWYLAN 1294
+TE LPYL AV ETLRL +PL+ P KL GYD+PA ++I++N +
Sbjct: 151 VTEDHVPRLPYLSAVFHETLRLHSPVPLVPPRFVHETTKLAGYDVPAGTEIVINLYGCNM 330
Query: 1295 NPDSW 1309
N W
Sbjct: 331 NKKDW 345
Score = 41.8 bits (85), Expect(2) = 1e-016
Identities = 18/46 (39%), Positives = 28/46 (60%)
Frame = +2 / +1
Query: 965 VLFIVENINVAAIETTLWSIEWAVAELVNHPEIQQKLRQELDTVLG 1102
++ +V + A +TTL + EWA+ EL +PE Q +L QE+ V G
Sbjct: 4 LMMLVWEAVIEAADTTLVTTEWAMYELAKNPEKQDRLYQEIREVCG 141
Score = 26.7 bits (52), Expect(2) = 2.1
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = -3 / -3
Query: 1255 GGDVVXAELGVVEVHVRHQQRDGHPQPQRLLDHRLQV 1145
G DVV + G + Q D +P+RL++H +V
Sbjct: 291 GWDVVAGQFGGLMDKPWRHQWDRRMEPERLMEHGAEV 181
Score = 24.9 bits (48), Expect(2) = 2.1
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = -1 / -1
Query: 1101 PSTVSSSCRSFCWISGWFTSSATAHSIDHSVVSIAA 994
P T S S SG+ SS AHS+ VVS A+
Sbjct: 140 PHTSRISW*SRSCFSGFLASSYIAHSVVTKVVSAAS 33
>gb|CA009631.1|CA009631 HU14K18r HU Hordeum vulgare subsp. vulgare cDNA clone HU14K18
5-PRIME, mRNA sequence
Length = 630
Score = 49.6 bits (102), Expect(3) = 2e-016
Identities = 19/35 (54%), Positives = 26/35 (74%)
Frame = +2 / +1
Query: 1115 ITEPDTHNLPYLQAVIKETLRLRMAIPLLVPHMNL 1219
+ E D N+ YL+AV+KETLRL PLLVPH+++
Sbjct: 28 VKEDDLGNMSYLKAVVKETLRLHPPAPLLVPHLSM 132
Score = 44.6 bits (91), Expect(2) = 4e-006
Identities = 20/47 (42%), Positives = 26/47 (55%)
Frame = -1 / -2
Query: 1503 PGGGSSSKFWTRRPMVMPRMGRARMIPGQLLRPTPKGRYLKSLPLAS 1363
P G S SK TR + + + +PG +LRP P G+ KSLPL S
Sbjct: 425 PSGSSQSKQ*TRLASMTSTVANPKPMPGHILRPAPNGKN*KSLPLKS 285
Score = 41.8 bits (85), Expect(3) = 2e-016
Identities = 18/49 (36%), Positives = 22/49 (44%)
Frame = +2 / +1
Query: 1373 GNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQDKVD 1519
G DF++LPFG GRR CP LV F+ P G + D
Sbjct: 295 GRDFQFLPFGAGRRMCPGMGFGLATVEVMLANLVYCFDWELPDGMKEED 441
Score = 32.7 bits (65), Expect(3) = 2e-016
Identities = 9/26 (34%), Positives = 17/26 (65%)
Frame = +2 / +1
Query: 1232 LGGYDIPAESKILVNAWYLANNPDSW 1309
+ GY +PA ++ ++NAW L + + W
Sbjct: 148 VNGYLVPARTRAIINAWALCRDTELW 225
Score = 30.4 bits (60), Expect(2) = 4e-006
Identities = 17/31 (54%), Positives = 18/31 (58%)
Frame = -1 / -2
Query: 1209 CGTSSGMAIRSRSVSLITACR*GRLCVSGSV 1117
CGT SG SRSVS TA R* L S S+
Sbjct: 122 CGTRSGAGG*SRSVSFTTALR*DMLPKSSSL 30
>gb|BJ463196.1|BJ463196 BJ463196 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags26d07 5', mRNA sequence
Length = 578
Score = 87.2 bits (184), Expect = 3e-016
Identities = 33/67 (49%), Positives = 48/67 (71%)
Frame = +2 / +2
Query: 1109 HQITEPDTHNLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWYL 1288
H + E D ++L YL+AVIKETLRL M PLLVPH+ + D + GY IP+ ++++VN+ +
Sbjct: 368 HMVIEDDLNHLAYLKAVIKETLRLHMPAPLLVPHLAMADCVINGYTIPSGTRVIVNSRAI 547
Query: 1289 ANNPDSW 1309
A +P SW
Sbjct: 548 ARDPSSW 568
Score = 33.1 bits (66), Expect = 4.8
Identities = 23/53 (43%), Positives = 27/53 (50%)
Frame = -1 / -3
Query: 1275 LTRILLSAGMSXPPSLASWRFMCGTSSGMAIRSRSVSLITACR*GRLCVSGSV 1117
LT + GM P S GT SG + SRSVSL+TA R* R S S+
Sbjct: 534 LTMTRVPDGMV*PFMTQSAMARWGTRSGAGM*SRSVSLMTAFR*ARWLRSSSM 376
>gb|BG301188.1|BG301188 HVSMEb0019N18f Hordeum vulgare seedling shoot EST library HVcDNA0002
(Dehydration stress) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEb0019N18f, mRNA sequence
Length = 925
Score = 75.8 bits (159), Expect(2) = 3e-016
Identities = 29/55 (52%), Positives = 41/55 (74%)
Frame = +2 / +3
Query: 1109 HQITEPDTHNLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILV 1273
H +TE D ++L YL+AVIKETLRL M PLLVPH+ + D + GY IP+ ++++V
Sbjct: 510 HMVTEDDLNHLAYLKAVIKETLRLHMPAPLLVPHLAMADCVINGYTIPSGTRVIV 674
Score = 40.0 bits (81), Expect(2) = 2e-007
Identities = 18/41 (43%), Positives = 23/41 (56%)
Frame = -1 / -1
Query: 1491 SSSKFWTRRPMVMPRMGRARMIPGQLLRPTPKGRYLKSLPL 1369
SS + R ++P R IPGQ LRP PKGR + +PL
Sbjct: 901 SSGNW*PRLVSMIPMAAMRRFIPGQYLRPVPKGR*KEXVPL 779
Score = 35.9 bits (72), Expect(2) = 2e-007
Identities = 25/53 (47%), Positives = 27/53 (50%)
Frame = -1 / -1
Query: 1275 LTRILLSAGMSXPPSLASWRFMCGTSSGMAIRSRSVSLITACR*GRLCVSGSV 1117
LT + GM P S GT SG + SRSVSLITA R* R S SV
Sbjct: 676 LTMTRVPDGMV*PFMTQSAMARWGTRSGAGM*SRSVSLITAFR*ARWLRSSSV 518
Score = 30.4 bits (60), Expect(2) = 3e-016
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = +2 / +3
Query: 1388 YLPFGVGRRSCP 1423
YLPFG GRR CP
Sbjct: 798 YLPFGTGRRYCP 833
>gb|BU995653.1|BU995653 HM10O21r HM Hordeum vulgare subsp. vulgare cDNA clone HM10O21
5-PRIME, mRNA sequence
Length = 367
Score = 86.3 bits (182), Expect = 5e-016
Identities = 34/97 (35%), Positives = 55/97 (56%)
Frame = +2 / +1
Query: 1019 SIEWAVAELVNHPEIQQKLRQELDTVLGPGHQITEPDTHNLPYLQAVIKETLRLRMAIPL 1198
++EW + L+ P Q+++ E+ G +ITE D +LPYLQAV+KET R
Sbjct: 22 ALEWVMMHLILDPAAQERVYDEVVAKAGKTARITEADVESLPYLQAVVKETFRRHPPSHF 201
Query: 1199 LVPHMNLHDAKLGGYDIPAESKILVNAWYLANNPDSW 1309
++ H DA+LGGY +PA + + ++ NP++W
Sbjct: 202 VLSHAATRDAELGGYRVPANASVEFYTAWVTENPETW 312
Score = 40.5 bits (82), Expect = 0.030
Identities = 24/61 (39%), Positives = 32/61 (52%)
Frame = -1 / -3
Query: 1263 LLSAGMSXPPSLASWRFMCGTSSGMAIRSRSVSLITACR*GRLCVSGSVIWWPGPSTVSS 1084
L AG PPS AS C ++ + R+VS TACR*G+ S SVI P+ ++
Sbjct: 266 LAFAGTLYPPSSASLVAACDSTKWLGGCRRNVSFTTACR*GKDSTSASVIRAVLPALATT 87
Query: 1083 S 1081
S
Sbjct: 86 S 84
Score = 36.3 bits (73), Expect = 0.51
Identities = 17/35 (48%), Positives = 21/35 (60%)
Frame = -3 / -2
Query: 1243 VXAELGVVEVHVRHQQRDGHPQPQRLLDHRLQVGE 1139
V A+LGV VR + P+RLL HRLQVG+
Sbjct: 246 VPAQLGVPRRRVRQHEVARRVPPERLLHHRLQVGQ 142
>gb|BI959145.1|BI959145 HVSMEn0018G02f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0018G02f,
mRNA sequence
Length = 682
Score = 61.6 bits (128), Expect(2) = 5e-016
Identities = 30/50 (60%), Positives = 31/50 (62%)
Frame = -1 / +2
Query: 1503 PGGGSSSKFWTRRPMVMPRMGRARMIPGQLLRPTPKGRYLKSLPLASTCF 1354
P S KF TRR VMP MG A+MIPG L TPKG KSLP AST F
Sbjct: 350 PRPWSPPKFCTRRASVMPMMGSAKMIPGHLPGATPKGTNRKSLPRASTGF 499
Score = 54.2 bits (112), Expect(2) = 1e-014
Identities = 21/26 (80%), Positives = 23/26 (88%)
Frame = +2 / -3
Query: 1508 DKVDTTEKGGQFSLHILKHSTIVCKP 1585
DK+DTTEK GQFS ILKH+TIVCKP
Sbjct: 314 DKIDTTEKPGQFSNQILKHATIVCKP 237
Score = 46.4 bits (95), Expect(2) = 1e-014
Identities = 20/43 (46%), Positives = 22/43 (51%)
Frame = +2 / -2
Query: 1355 KHVEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNF 1483
K VEA GNDFR++P GV CP RLVQNF
Sbjct: 498 KPVEARGNDFRFVPLGVAPGRCPGIIFALPIIGITLARLVQNF 370
Score = 43.7 bits (89), Expect(2) = 5e-016
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = -2 / +2
Query: 1601 ALKAFLACTRWWNASRCGD*TGLPSRWCXPC 1509
++K +AC RWW A G *T L SRWC C
Sbjct: 221 SIKPRVACRRWWRA*GSGC*TALASRWCRSC 313
Score = 42.3 bits (86), Expect(2) = 3e-005
Identities = 17/26 (65%), Positives = 19/26 (73%)
Frame = -1 / +1
Query: 1584 GLHTMVECFKMWRLNWPPFSVVSTLS 1507
GL TMV C ++W LN P FSVVS LS
Sbjct: 238 GLQTMVACLRIWLLNCPGFSVVSILS 315
Score = 40.5 bits (82), Expect(2) = 9e-007
Identities = 16/29 (55%), Positives = 18/29 (62%)
Frame = +1 / -2
Query: 1510 QGXHHREGRPVQSPHLEAFHHRVQAKNAL 1596
Q HHRE R VQ P +A HHR+QA L
Sbjct: 312 QDRHHREARAVQQPDPQARHHRLQATRGL 226
Score = 36.8 bits (74), Expect(2) = 9e-007
Identities = 14/19 (73%), Positives = 18/19 (94%)
Frame = +2 / -3
Query: 578 AATDGIVLRRRLQLMMYNN 634
AAT G+V++RRLQLMMYN+
Sbjct: 368 AATKGVVVQRRLQLMMYND 312
Score = 29.9 bits (59), Expect(2) = 3e-005
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -3 / +3
Query: 634 VVVHHELQASAEHDSVGGR 578
VVVHHELQ + H ++G R
Sbjct: 312 VVVHHELQPALHHHALGRR 368
Score = 29.0 bits (57), Expect(2) = 0.75
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -3 / +3
Query: 1585 WLAHDGGMLQDVETEL 1538
WLA DGG+L+D+ EL
Sbjct: 237 WLADDGGVLEDLVAEL 284
Score = 27.6 bits (54), Expect(2) = 0.75
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = -1 / +1
Query: 630 LYIMSCRRRRSTIPSVAA 577
LYIMSC R +T P VAA
Sbjct: 316 LYIMSCSLRCTTTPLVAA 369
>gb|AV916579.1|AV916579 AV916579 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags17n10 5', mRNA sequence
Length = 563
Score = 51.5 bits (106), Expect(3) = 5e-016
Identities = 20/33 (60%), Positives = 24/33 (72%)
Frame = +2 / +1
Query: 1115 ITEPDTHNLPYLQAVIKETLRLRMAIPLLVPHM 1213
ITE D LPYLQA +KE++RL PLL+PHM
Sbjct: 100 ITEADVAKLPYLQAAVKESMRLHPVAPLLLPHM 198
Score = 39.1 bits (79), Expect(3) = 5e-016
Identities = 10/27 (37%), Positives = 20/27 (74%)
Frame = +2 / +1
Query: 1229 KLGGYDIPAESKILVNAWYLANNPDSW 1309
++GGYD+P + I+ N+W + +P++W
Sbjct: 217 EIGGYDVPMGATIIFNSWSIMRDPEAW 297
Score = 36.3 bits (73), Expect(2) = 0.10
Identities = 20/42 (47%), Positives = 21/42 (50%)
Frame = -1 / -1
Query: 1239 PPSLASWRFMCGTSSGMAIRSRSVSLITACR*GRLCVSGSVI 1114
P S S MCG+SSG SR S ACR G S SVI
Sbjct: 224 PISTPSSTTMCGSSSGATGCSRIDSFTAACRYGSFATSASVI 99
Score = 31.8 bits (63), Expect(3) = 5e-016
Identities = 13/44 (29%), Positives = 18/44 (40%)
Frame = +2 / +1
Query: 1373 GNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPG 1504
G D +++P G GRR CP ++ FE P G
Sbjct: 358 GKDVKFIPLGTGRRLCPALPMVELVVPFMVASMLHAFEWRLPQG 489
Score = 23.1 bits (44), Expect(2) = 0.10
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = -1 / -1
Query: 1422 GQLLRPTPKGRYLKSLP 1372
G LRP P G L S P
Sbjct: 407 GHSLRPVPSGMNLTSFP 357
>gb|CA012057.1|CA012057 HT04F04r HT Hordeum vulgare subsp. vulgare cDNA clone HT04F04
5-PRIME, mRNA sequence
Length = 399
Score = 72.1 bits (151), Expect(2) = 7e-016
Identities = 32/81 (39%), Positives = 48/81 (59%)
Frame = +2 / +3
Query: 959 DNVLFIVENINVAAIETTLWSIEWAVAELVNHPEIQQKLRQELDTVLGPGHQITEPDTHN 1138
D V I+ ++ A ETT ++EWA++EL+N+P+ QK E+ ++E
Sbjct: 12 DAVKAIILDVFAAGSETTTTTLEWAISELINNPKAMQKATTEVRQAFHGHGAVSEDALSE 191
Query: 1139 LPYLQAVIKETLRLRMAIPLL 1201
LPYL+ VI+ETLRL +PLL
Sbjct: 192 LPYLRIVIRETLRLHAPLPLL 254
Score = 32.7 bits (65), Expect(2) = 7e-016
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +2 / +3
Query: 1238 GYDIPAESKILVNAWYLANNPDSW 1309
GYD+P +++LVN W L + W
Sbjct: 288 GYDVPRGTQVLVNGWALCRDERYW 359
>gb|AV934105.1|AV934105 AV934105 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal11a15 5', mRNA sequence
Length = 544
Score = 84.5 bits (178), Expect = 2e-015
Identities = 31/65 (47%), Positives = 46/65 (70%)
Frame = +2 / +1
Query: 1115 ITEPDTHNLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWYLAN 1294
I+E D +N+ YL+AVIKE+LRL PLL PH+ + D + GY +PA ++++VNAW +
Sbjct: 268 ISETDMNNMTYLRAVIKESLRLHPVAPLLAPHLAMADCIIDGYIVPAGTRVVVNAWAIGR 447
Query: 1295 NPDSW 1309
+P SW
Sbjct: 448 DPSSW 462
>gb|BF262413.2|BF262413 HV_CEa0004D05f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0004D05f, mRNA sequence
Length = 866
Score = 83.5 bits (176), Expect = 3e-015
Identities = 33/81 (40%), Positives = 50/81 (61%)
Frame = +2 / +3
Query: 242 HRNLAALSRKFGDVFLLRMGQRNLVVVSSPPLAREVLHTQGVEFGSRTRNVVFDIFTDKG 421
HR L +LSR++G V LLR+G+ V+VS+P A VL T + F +RT D+
Sbjct: 204 HRALLSLSRRYGPVMLLRLGEVPNVIVSTPEAAMLVLKTNDLTFATRTSGPTLDVVCSAS 383
Query: 422 QDMVFTVYGDHWRKMRRIMTV 484
+ ++F YG+HWR+MR++ V
Sbjct: 384 EGIIFAPYGEHWRQMRKVCVV 446
Score = 38.6 bits (78), Expect = 0.11
Identities = 20/53 (37%), Positives = 27/53 (50%)
Frame = -3 / -1
Query: 493 EEGHGHDAAHLAPVVAVHGEHHVLPLVREDVEDHVAGAGAELHALRVEHLPRQ 335
E+ H D AHL PV+AV E L + V+ AG G E + +EH R+
Sbjct: 455 EQLHDADLAHLPPVLAVGREDDALAGAADYVQRGAAGTGGEGEVVGLEHQHRR 297
>gb|BJ464184.1|BJ464184 BJ464184 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags33d19 5', mRNA sequence
Length = 597
Score = 83.5 bits (176), Expect = 3e-015
Identities = 29/65 (44%), Positives = 46/65 (70%)
Frame = +2 / +1
Query: 1115 ITEPDTHNLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWYLAN 1294
+T+ D H LPYL+AVIKETLRL M PL+VPH+++ + + GY IP+ ++ +N + +
Sbjct: 349 VTQDDLHGLPYLKAVIKETLRLHMPGPLMVPHLSMDECIINGYTIPSGTRTFINTYAIQR 528
Query: 1295 NPDSW 1309
+P +W
Sbjct: 529 DPSNW 543
Score = 34.5 bits (69), Expect = 1.8
Identities = 21/46 (45%), Positives = 27/46 (58%)
Frame = -1 / -2
Query: 1275 LTRILLSAGMSXPPSLASWRFMCGTSSGMAIRSRSVSLITACR*GR 1138
L ++ + G+ P + S GT SG + SRSVSLITA R*GR
Sbjct: 509 LMKVRVPDGIV*PFMMHSSMERWGTMSGPGM*SRSVSLITAFR*GR 372
>gb|BF630963.2|BF630963 HVSMEb0014J02f Hordeum vulgare seedling shoot EST library HVcDNA0002
(Dehydration stress) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEb0014J02f, mRNA sequence
Length = 746
Score = 83.1 bits (175), Expect = 4e-015
Identities = 36/89 (40%), Positives = 56/89 (62%)
Frame = +2 / +2
Query: 935 QQKGEINEDNVLFIVENINVAAIETTLWSIEWAVAELVNHPEIQQKLRQELDTVLGPGHQ 1114
Q+ ++ D + ++ ++ A TT IEW + +L+ +PE+ +K+++EL TVLG
Sbjct: 392 QEGSLLSHDVMRALLSDLYGAGASTTAALIEWGMVDLLQNPEVMRKVKEELTTVLGEKPL 571
Query: 1115 ITEPDTHNLPYLQAVIKETLRLRMAIPLL 1201
+ E D LPYLQAV KE LRLRM +PL+
Sbjct: 572 MEEXDIGRLPYLQAVAKEILRLRMVVPLV 658
>gb|BG367227.1|BG367227 HVSMEi0011F22f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0011F22f, mRNA sequence
Length = 517
Score = 83.1 bits (175), Expect = 4e-015
Identities = 38/93 (40%), Positives = 53/93 (56%)
Frame = +2 / +1
Query: 218 LQVGDDLNHRNLAALSRKFGDVFLLRMGQRNLVVVSSPPLAREVLHTQGVEFGSRTRNVV 397
L + L HR L L+R+ G LLR+G+ N VVVSS AREVL F +R +
Sbjct: 238 LVLAGKLPHRALRELARRHGPAMLLRLGEVNAVVVSSREGAREVLKNHDTMFATRPLSTT 417
Query: 398 FDIFTDKGQDMVFTVYGDHWRKMRRIMTVPFFT 496
+ + GQD+VF YG++WR++R+I FT
Sbjct: 418 MRVLSYGGQDIVFAPYGEYWRQLRKIAVSELFT 516
Score = 46.4 bits (95), Expect = 5e-004
Identities = 30/84 (35%), Positives = 35/84 (41%)
Frame = -1 / -3
Query: 495 VKKGTVMMRRILRQWSPYTVNTMSCPLSVKMSKTTLRVREPNSTPCVWSTSRASGGDETT 316
VK + R RQ+SP TMS P LR R N STSRA ++TT
Sbjct: 515 VKSSDTAILRSWRQYSP*GAKTMSWPP*ESTRMVVLRGRVANMVSWFLSTSRAPSREDTT 336
Query: 315 TRLRCPIRRRKTSPNLRDSAARLR 244
T L P R P R S+ R
Sbjct: 335 TALTSPSRSSMAGPWRRASSRSAR 264
Score = 45.1 bits (92), Expect = 0.001
Identities = 33/100 (33%), Positives = 42/100 (42%)
Frame = -3 / -2
Query: 496 GEEGHGHDAAHLAPVVAVHGEHHVLPLVREDVEDHVAGAGAELHALRVEHLPRQRRRRDH 317
GEE D A LAPV+AV E VL V E G E + +EHL R H
Sbjct: 516 GEELGHGDLAELAPVLAVGREDDVLAAVGEHAHGGAQGPRREHGVVVLEHLARPLPGGHH 337
Query: 316 HQVALPHPEEEDVAELAGQRGEVAVVEVVADLQPVPEDGH 197
V L PE+ Q + AV E+ ++ + V H
Sbjct: 336 DGVDLTEPEQHGRPVAPRQLAQRAVRELPSEDEVVQAADH 217
>gb|AV931728.1|AV931728 AV931728 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp. vulgare
cDNA clone basd23p07 3', mRNA sequence
Length = 610
Score = 60.2 bits (125), Expect(2) = 4e-015
Identities = 21/50 (42%), Positives = 32/50 (64%)
Frame = +2 / -2
Query: 1160 IKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWYLANNPDSW 1309
+KE+LRL PL++PH K+GGY+IP + ++VN W +A +P W
Sbjct: 609 VKESLRLHPPTPLMLPHKASASVKVGGYNIPKGANVMVNVWAVARDPKVW 460
Score = 41.8 bits (85), Expect(2) = 4e-015
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +2 / -2
Query: 1361 VEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPG 1504
++ G+DFR LPFG GRR CP ++ +F+ P G
Sbjct: 414 IDIKGSDFRVLPFGAGRRVCPGAQLGINLVASMIGHMLHHFKWSLPEG 271
Score = 36.8 bits (74), Expect = 0.37
Identities = 15/21 (71%), Positives = 15/21 (71%)
Frame = -1 / +2
Query: 1425 PGQLLRPTPKGRYLKSLPLAS 1363
PG LRP PKG LKSLPL S
Sbjct: 350 PGHTLRPAPKGSTLKSLPLMS 412
>gb|AV836496.1|AV836496 AV836496 K. Sato unpublished cDNA library: Hordeum vulgare subsp.
vulgare seedling leaves second leaf stage Hordeum vulgare
subsp. vulgare cDNA clone basd22b21, mRNA sequence
Length = 521
Score = 82.2 bits (173), Expect = 8e-015
Identities = 37/92 (40%), Positives = 57/92 (61%)
Frame = +2 / +2
Query: 962 NVLFIVENINVAAIETTLWSIEWAVAELVNHPEIQQKLRQELDTVLGPGHQITEPDTHNL 1141
NV ++ ++ V ETT ++EWA+AE++ + I +K+++ELD V+G + E L
Sbjct: 245 NVKALLMDMVVGGTETTSNTVEWAMAEMLQNLRILRKVQEELDEVVGIDGVVEESHLPQL 424
Query: 1142 PYLQAVIKETLRLRMAIPLLVPHMNLHDAKLG 1237
YL V+KETLRL A+PL+VPH D +G
Sbjct: 425 HYLHLVVKETLRLHPALPLMVPHCPNEDTTVG 520
Score = 39.1 bits (79), Expect = 0.077
Identities = 21/69 (30%), Positives = 29/69 (42%)
Frame = -3 / -2
Query: 1210 VRHQQRDGHPQPQRLLDHRLQVGEXXXXXXXXXXXRPEHRVXXXXXXXXXLRVVHQLSDR 1031
VRH +R QP+RLLDH++Q+ + P H V +V+ L
Sbjct: 493 VRHHERQRRMQPERLLDHQMQIVQLREMRFLHHAVDPNHLVEFLLHLPQYPQVL*HLRHG 314
Query: 1030 PLDRPQRGL 1004
P R R L
Sbjct: 313 PFHRV*RRL 287
Score = 36.3 bits (73), Expect(2) = 3e-004
Identities = 18/31 (58%), Positives = 20/31 (64%)
Frame = -1 / -3
Query: 1236 PSLASWRFMCGTSSGMAIRSRSVSLITACR* 1144
P++ S CGT SG A SRSVSL T CR*
Sbjct: 519 PTVVSSLGQCGTMSGSAGCSRSVSLTTRCR* 427
Score = 28.6 bits (56), Expect(2) = 3e-004
Identities = 18/47 (38%), Positives = 24/47 (51%)
Frame = -1 / -3
Query: 1101 PSTVSSSCRSFCWISGWFTSSATAHSIDHSVVSIAATLMFSTMKSTL 961
P+T SSS +F I + + SA AHS VVS+ T + TL
Sbjct: 384 PTTSSSSSCTFRSIRRFCSISAMAHSTVFDVVSVPPTTISMRRAFTL 244
>gb|AV929028.1|AV929028 AV929028 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp. vulgare
cDNA clone basd20l03 3', mRNA sequence
Length = 557
Score = 82.2 bits (173), Expect = 8e-015
Identities = 33/116 (28%), Positives = 61/116 (52%)
Frame = +2 / -1
Query: 950 INEDNVLFIVENINVAAIETTLWSIEWAVAELVNHPEIQQKLRQELDTVLGPGHQITEPD 1129
+ DN+ I+ + I+T + W ++EL+ +P + +K + E+ V+ ++ E D
Sbjct: 422 LTRDNIKGILMDTFTGGIDTCAVTTIWIMSELMRNPRVMRKAQSEVRAVVRNKSRVDEED 243
Query: 1130 THNLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWYLANN 1297
L YL+ V+KE RL LL+P + ++ GY +PA ++I V+ W + N
Sbjct: 242 AQGLKYLKMVVKENFRLHPPGTLLIPRETMQSCEIAGYSVPAGTRIHVDVWAMGRN 75
>gb|BE519751.1|BE519751 HV_CEb0021B09f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0021B09f, mRNA sequence
Length = 713
Score = 81.7 bits (172), Expect = 1e-014
Identities = 36/92 (39%), Positives = 55/92 (59%)
Frame = +2 / +1
Query: 242 HRNLAALSRKFGDVFLLRMGQRNLVVVSSPPLAREVLHTQGVEFGSRTRNVVFDIFTDKG 421
H L L++K G V LR GQ + VV+SSP A+EVL + + F SR +V +IF G
Sbjct: 202 HVALRDLAKKHGPVMYLRFGQIDTVVISSPAAAQEVLRDKDLAFASRPNILVSEIFCYGG 381
Query: 422 QDMVFTVYGDHWRKMRRIMTVPFFTNKVVQQY 517
+D+V YG +WR R++ T+ + + V+Q+
Sbjct: 382 RDVVLAPYGPYWRTTRKLCTMELLSERKVRQF 477
Score = 49.2 bits (101), Expect = 7e-005
Identities = 32/75 (42%), Positives = 35/75 (46%)
Frame = -3 / -3
Query: 484 HGHDAAHLAPVVAVHGEHHVLPLVREDVEDHVAGAGAELHALRVEHLPRQRRRRDHHQVA 305
H + A PV AV E V V ED+ D G E L EHL R+RRR D V
Sbjct: 444 HRAELARRPPVGAVGREDDVATSVAEDL*DQDVGP*REGKVLVPEHLLRRRRR*DDDGVD 265
Query: 304 LPHPEEEDVAELAGQ 260
L PE D A L GQ
Sbjct: 264 LAEPEVHDRAVLLGQ 220
Score = 44.1 bits (90), Expect = 0.002
Identities = 28/80 (35%), Positives = 37/80 (46%)
Frame = -1 / -1
Query: 513 CCTTLLVKKGTVMMRRILRQWSPYTVNTMSCPLSVKMSKTTLRVREPNSTPCVWSTSRAS 334
C T + V R++RQ P T S P K+S+T + R+ + STS A+
Sbjct: 473 CRTFRSLSSSIVQSLRVVRQ*GP*GARTTSRPP*QKISETRMLGRDAKARSLSRSTSCAA 294
Query: 333 GGDETTTRLRCPIRRRKTSP 274
GDE TT P RR T P
Sbjct: 293 AGDEMTTVSIWPNRRYMTGP 234
>gb|BM443441.2|BM443441 EBro02_SQ005_C13_R root, 3 week, hydroponic grown, low nitrogen, cv
Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone
EBro02_SQ005_C13 5', mRNA sequence
Length = 492
Score = 81.7 bits (172), Expect = 1e-014
Identities = 36/92 (39%), Positives = 55/92 (59%)
Frame = +2 / +1
Query: 242 HRNLAALSRKFGDVFLLRMGQRNLVVVSSPPLAREVLHTQGVEFGSRTRNVVFDIFTDKG 421
H L L++K G V LR GQ + VV+SSP A+EVL + + F SR +V +IF G
Sbjct: 190 HVALRDLAKKHGPVMYLRFGQIDTVVISSPAAAQEVLRDKDLAFASRPNILVSEIFCYGG 369
Query: 422 QDMVFTVYGDHWRKMRRIMTVPFFTNKVVQQY 517
+D+V YG +WR R++ T+ + + V+Q+
Sbjct: 370 RDVVLAPYGPYWRTTRKLCTMELLSERKVRQF 465
Score = 49.2 bits (101), Expect = 7e-005
Identities = 32/75 (42%), Positives = 35/75 (46%)
Frame = -3 / -1
Query: 484 HGHDAAHLAPVVAVHGEHHVLPLVREDVEDHVAGAGAELHALRVEHLPRQRRRRDHHQVA 305
H + A PV AV E V V ED+ D G E L EHL R+RRR D V
Sbjct: 432 HRAELARRPPVGAVGREDDVATSVAEDL*DQDVGP*REGKVLVPEHLLRRRRR*DDDGVD 253
Query: 304 LPHPEEEDVAELAGQ 260
L PE D A L GQ
Sbjct: 252 LAEPEVHDRAVLLGQ 208
Score = 44.1 bits (90), Expect = 0.002
Identities = 28/80 (35%), Positives = 37/80 (46%)
Frame = -1 / -2
Query: 513 CCTTLLVKKGTVMMRRILRQWSPYTVNTMSCPLSVKMSKTTLRVREPNSTPCVWSTSRAS 334
C T + V R++RQ P T S P K+S+T + R+ + STS A+
Sbjct: 461 CRTFRSLSSSIVQSLRVVRQ*GP*GARTTSRPP*QKISETRMLGRDAKARSLSRSTSCAA 282
Query: 333 GGDETTTRLRCPIRRRKTSP 274
GDE TT P RR T P
Sbjct: 281 AGDEMTTVSIWPNRRYMTGP 222
>gb|BF257896.3|BF257896 HVSMEf0014C17f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEf0014C17f, mRNA sequence
Length = 568
Score = 59.7 bits (124), Expect(2) = 2e-014
Identities = 29/89 (32%), Positives = 50/89 (56%)
Frame = +2 / +1
Query: 935 QQKGEINEDNVLFIVENINVAAIETTLWSIEWAVAELVNHPEIQQKLRQELDTVLGPGHQ 1114
Q+ ++ D + ++ + A TT IEW + +L+++P + K+++EL T +G
Sbjct: 70 QEGSLLSHDVMRALLSDWYGAGASTTAALIEWGMEDLLHNP*VMLKVKEELTTDVGEKPL 249
Query: 1115 ITEPDTHNLPYLQAVIKETLRLRMAIPLL 1201
+ E D + YLQA E LRLRM +PL+
Sbjct: 250 MEESDIGRIAYLQADAIEILRLRMVVPLV 336
Score = 40.5 bits (82), Expect(2) = 2e-014
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +2 / +1
Query: 1199 LVPHMNLHDAKLGGYDIPAESKILVNAWYLANNPDSW 1309
LVP M + D + GY IP + +++NAW + DSW
Sbjct: 331 LVPFMAVADIDVNGYRIPKGAGVILNAWTINRYADSW 441
>gb|BE558465.1|BE558465 HV_CEb0017M13f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0017M13f, mRNA sequence
Length = 723
Score = 81.3 bits (171), Expect = 2e-014
Identities = 31/93 (33%), Positives = 55/93 (59%)
Frame = +2 / +2
Query: 950 INEDNVLFIVENINVAAIETTLWSIEWAVAELVNHPEIQQKLRQELDTVLGPGHQITEPD 1129
+ + ++ ++ A ETT +++W +A LV P++QQKLR E+D + G G + E +
Sbjct: 266 VTDGELVSLISEFLGAGTETTASALQWTMANLVKRPDLQQKLRVEVDAIAGNGQVVEETE 445
Query: 1130 THNLPYLQAVIKETLRLRMAIPLLVPHMNLHDA 1228
+PYL+AV+ E+LR +P ++ HM +A
Sbjct: 446 LSRMPYLKAVVLESLRRHPPLPFVLRHMEGEEA 544
Score = 41.4 bits (84), Expect = 0.016
Identities = 25/59 (42%), Positives = 30/59 (50%)
Frame = -1 / -1
Query: 1170 VSLITACR*GRLCVSGSVIWWPGPSTVSSSCRSFCWISGWFTSSATAHSIDHSVVSIAA 994
+S TA R G S S P P+ S+S RSFC SG FT A H +VVS+ A
Sbjct: 486 LSSTTALRYGMRDSSVSSTTCPLPAMASTSTRSFCCRSGRFTRLAIVHCSAEAVVSVPA 310
>gb|CA017637.1|CA017637 HV05M12r HV Hordeum vulgare subsp. vulgare cDNA clone HV05M12
5-PRIME, mRNA sequence
Length = 500
Score = 81.3 bits (171), Expect = 2e-014
Identities = 35/89 (39%), Positives = 54/89 (60%)
Frame = +2 / +1
Query: 251 LAALSRKFGDVFLLRMGQRNLVVVSSPPLAREVLHTQGVEFGSRTRNVVFDIFTDKGQDM 430
L L++K G V LR GQ + VVVSSP A+EVL + + F SR +V +IF G+++
Sbjct: 106 LRDLAKKHGPVMYLRFGQMDTVVVSSPAAAQEVLRDKDLSFASRPNILVSEIFCYGGRNL 285
Query: 431 VFTVYGDHWRKMRRIMTVPFFTNKVVQQY 517
+ YG +WR R++ TV + + V+Q+
Sbjct: 286 ILAPYGPYWRMTRKLCTVELLSERKVRQF 372
Score = 46.4 bits (95), Expect = 5e-004
Identities = 28/80 (35%), Positives = 38/80 (47%)
Frame = -1 / -1
Query: 513 CCTTLLVKKGTVMMRRILRQWSPYTVNTMSCPLSVKMSKTTLRVREPNSTPCVWSTSRAS 334
C T ++ TV R++RQ P P K+S+T + R+ N STS A+
Sbjct: 368 CRTLRSLRSSTVQSLRVIRQ*GP*GARIRLRPP*QKISETRMLGRDANERSLSRSTSCAA 189
Query: 333 GGDETTTRLRCPIRRRKTSP 274
G+ETTT P RR T P
Sbjct: 188 AGEETTTVSIWPNRRYMTGP 129
>gb|CA005397.1|CA005397 HU10K20u HU Hordeum vulgare subsp. vulgare cDNA clone HU10K20
3-PRIME, mRNA sequence
Length = 520
Score = 50.6 bits (104), Expect(3) = 3e-014
Identities = 20/66 (30%), Positives = 35/66 (53%)
Frame = +2 / +1
Query: 1112 QITEPDTHNLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWYLA 1291
+++E D H +PYL+AV+ E LR ++PH D ++GGY IP + + ++
Sbjct: 181 EVSEVDVHKMPYLKAVVLEGLRKHPPAHFVLPHKAAEDMEVGGYLIPKGATVNFMVAEMS 360
Query: 1292 NNPDSW 1309
+ W
Sbjct: 361 RDEREW 378
Score = 39.6 bits (80), Expect(3) = 3e-014
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +2 / +1
Query: 995 AAIETTLWSIEWAVAELVNHPEIQQKLRQELDTVLG 1102
A +TT ++W +AELV +P IQ+KL +E+ G
Sbjct: 61 AGTDTTSTGLQWIMAELVKNPAIQEKLYKEISATKG 168
Score = 34.5 bits (69), Expect(3) = 0.003
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = -1 / -3
Query: 1074 SFCWISGWFTSSATAHSIDHSVVSIAAT 991
SF W++G+FTSSA H VVS+ A+
Sbjct: 140 SFSWMAGFFTSSAMIHCKPVEVVSVPAS 57
Score = 26.3 bits (51), Expect(3) = 3e-014
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = +2 / +1
Query: 1379 DFRYLPFGVGRRSC 1420
+ + +PFGVGRR C
Sbjct: 457 EIKMMPFGVGRRIC 498
Score = 25.4 bits (49), Expect(3) = 0.003
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -1 / -3
Query: 1425 PGQLLRPTPKGRYLKS 1378
P Q+LRPTP G L S
Sbjct: 503 PAQILRPTPNGIILIS 456
Score = 22.6 bits (43), Expect(3) = 0.003
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = -1 / -3
Query: 1251 GMSXPPSLASWRFMCGTSSGMAIRSRSVSLITACR*GRLCVSGS 1120
G+ PP+ S +CG++ R S TA R G L S S
Sbjct: 320 GIRYPPTSMSSAALCGSTKCAGGCFRRPSRTTAFRYGILWTSTS 189
>gb|BF260074.2|BF260074 HVSMEf0021A16f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0021A16f, mRNA sequence
Length = 778
Score = 79.9 bits (168), Expect = 4e-014
Identities = 35/89 (39%), Positives = 53/89 (59%)
Frame = +2 / +3
Query: 251 LAALSRKFGDVFLLRMGQRNLVVVSSPPLAREVLHTQGVEFGSRTRNVVFDIFTDKGQDM 430
L L++K G V LR GQ + VVVSSP A+EVL + + F SR +V IF G+++
Sbjct: 213 LRDLAKKHGPVMYLRFGQMDTVVVSSPAAAQEVLRDKDLSFASRPNILVSQIFCYGGRNV 392
Query: 431 VFTVYGDHWRKMRRIMTVPFFTNKVVQQY 517
+ YG +WR R++ TV + + V+Q+
Sbjct: 393 ILAPYGPYWRMTRKLCTVELLSERKVRQF 479
Score = 40.9 bits (83), Expect = 0.021
Identities = 26/80 (32%), Positives = 36/80 (45%)
Frame = -1 / -1
Query: 513 CCTTLLVKKGTVMMRRILRQWSPYTVNTMSCPLSVKMSKTTLRVREPNSTPCVWSTSRAS 334
C T ++ TV R++RQ P P K+ +T + + N STS A+
Sbjct: 475 CRTLRSLRSSTVQSLRVIRQ*GP*GARMTLRPP*QKICETRMLGLDANERSLSRSTSCAA 296
Query: 333 GGDETTTRLRCPIRRRKTSP 274
G+ETTT P RR T P
Sbjct: 295 AGEETTTVSIWPNRRYMTGP 236
>gb|AU252309.1|AU252309 AU252309 salt-stressed barley root cDNA Hordeum vulgare subsp.
vulgare cDNA clone BR-C02 similar to cytochrome P450
CYP99A1, mRNA sequence
Length = 633
Score = 79.9 bits (168), Expect = 4e-014
Identities = 35/92 (38%), Positives = 54/92 (58%)
Frame = +2 / +3
Query: 242 HRNLAALSRKFGDVFLLRMGQRNLVVVSSPPLAREVLHTQGVEFGSRTRNVVFDIFTDKG 421
H L L++K G V LR GQ + VV+SSP A+EVL + + F R +V +IF G
Sbjct: 102 HVALRDLAKKHGPVMYLRFGQIDTVVISSPAAAQEVLRDKDLAFAXRPNILVSEIFCYGG 281
Query: 422 QDMVFTVYGDHWRKMRRIMTVPFFTNKVVQQY 517
+D+V YG +WR R++ T+ + + V+Q+
Sbjct: 282 RDVVLAPYGPYWRTTRKLCTMELLSERKVRQF 377
Score = 50.6 bits (104), Expect = 3e-005
Identities = 32/75 (42%), Positives = 35/75 (46%)
Frame = -3 / -2
Query: 484 HGHDAAHLAPVVAVHGEHHVLPLVREDVEDHVAGAGAELHALRVEHLPRQRRRRDHHQVA 305
H + A PV AV E V V ED+ D G E L EHL R+RRR D V
Sbjct: 344 HRAELARRPPVGAVGREDDVATSVAEDL*DQDVGPXREGKVLVPEHLLRRRRR*DDDGVD 165
Query: 304 LPHPEEEDVAELAGQ 260
L PE D A L GQ
Sbjct: 164 LAEPEVHDRAVLLGQ 120
Score = 42.8 bits (87), Expect = 0.006
Identities = 28/80 (35%), Positives = 36/80 (45%)
Frame = -1 / -3
Query: 513 CCTTLLVKKGTVMMRRILRQWSPYTVNTMSCPLSVKMSKTTLRVREPNSTPCVWSTSRAS 334
C T + V R++RQ P T S P K+S+T + R + STS A+
Sbjct: 373 CRTFRSLSSSIVQSLRVVRQ*GP*GARTTSRPP*QKISETRMLGRXAKARSLSRSTSCAA 194
Query: 333 GGDETTTRLRCPIRRRKTSP 274
GDE TT P RR T P
Sbjct: 193 AGDEMTTVSIWPNRRYMTGP 134
>gb|AJ434580.1|AJ434580 AJ434580 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200005G01F1, mRNA sequence
Length = 486
Score = 62.9 bits (131), Expect(2) = 5e-014
Identities = 24/55 (43%), Positives = 32/55 (58%)
Frame = +2 / +3
Query: 1145 YLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWYLANNPDSW 1309
Y+QA+IKET RL PLL+P K+ GY IP S++ VN W + + D W
Sbjct: 6 YIQAIIKETFRLHPPAPLLLPRQPEATLKIAGYTIPKGSRVFVNVWAIGRDKDVW 170
Score = 37.3 bits (75), Expect = 0.27
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = -1 / -3
Query: 1437 ARMIPGQLLRPTPKGRYLKSLPLAS 1363
A +IPGQ+ RP P GR KS PL S
Sbjct: 292 ANVIPGQIRRPAPNGRSSKSTPLKS 218
Score = 35.4 bits (71), Expect(2) = 5e-014
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = +2 / +3
Query: 1361 VEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFE 1486
++ G DF LPFG GRR CP L+ F+
Sbjct: 216 IDFRGVDFELLPFGAGRRICPGMTLAARMVHLMLASLLHQFK 341
>gb|BJ475646.1|BJ475646 BJ475646 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal29b02 3', mRNA sequence
Length = 617
Score = 62.0 bits (129), Expect(2) = 7e-014
Identities = 20/50 (40%), Positives = 32/50 (64%)
Frame = +2 / -2
Query: 1160 IKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWYLANNPDSW 1309
+KETLRL +PLL+P ++ + GY+IP +++LVN W + +P W
Sbjct: 616 VKETLRLHPVVPLLIPRVSREHTSIAGYEIPVGTRVLVNVWAIGRDPTVW 467
Score = 35.9 bits (72), Expect(2) = 7e-014
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +2 / -2
Query: 1361 VEANGNDFRYLPFGVGRRSCP 1423
V+ G+D LPFG GRR CP
Sbjct: 418 VDVKGHDLELLPFGAGRRMCP 356
>gb|CA018489.1|CA018489 HV08M10r HV Hordeum vulgare subsp. vulgare cDNA clone HV08M10
5-PRIME, mRNA sequence
Length = 550
Score = 79.0 bits (166), Expect = 8e-014
Identities = 35/81 (43%), Positives = 49/81 (60%)
Frame = +2 / +1
Query: 281 VFLLRMGQRNLVVVSSPPLAREVLHTQGVEFGSRTRNVVFDIFTDKGQDMVFTVYGDHWR 460
+ LLR+G +VVSSP A+ VL T F SR ++V +I D+ F+ YG+HWR
Sbjct: 301 LMLLRLGAVPTLVVSSPSAAQAVLRTHDHVFASRPYSLVSEILFYGPSDVAFSPYGEHWR 480
Query: 461 KMRRIMTVPFFTNKVVQQYRH 523
++R+I T TNK V+ YRH
Sbjct: 481 QVRKIATTHLLTNKKVRSYRH 543
>gb|BQ763910.1|BQ763910 EBro03_SQ005_A24_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ005_A24 5', mRNA sequence
Length = 585
Score = 78.5 bits (165), Expect = 1e-013
Identities = 34/91 (37%), Positives = 54/91 (59%)
Frame = +2 / +1
Query: 242 HRNLAALSRKFGDVFLLRMGQRNLVVVSSPPLAREVLHTQGVEFGSRTRNVVFDIFTDKG 421
HR L LSR+ G + L+ +G+ +VVSSP A+EVL T + F +R DI + G
Sbjct: 79 HRALLRLSRRHGPLMLVWLGEVPSIVVSSPEAAKEVLKTNDLVFANRPCGPTMDIVSCGG 258
Query: 422 QDMVFTVYGDHWRKMRRIMTVPFFTNKVVQQ 514
+ ++ YGDHWR+MR++ V + + V++
Sbjct: 259 KGILLAPYGDHWRQMRKVCVVEVLSARQVRR 351
Score = 46.9 bits (96), Expect = 3e-004
Identities = 29/88 (32%), Positives = 37/88 (42%)
Frame = -1 / -2
Query: 507 TTLLVKKGTVMMRRILRQWSPYTVNTMSCPLSVKMSKTTLRVREPNSTPCVWSTSRASGG 328
T L + T RI RQWSP M P + MS R + V STS A+ G
Sbjct: 344 TCLALSTSTTQTLRICRQWSP*GAKRMPLPPQLTMSIVGPHGRLAKTRSFVLSTSFAASG 165
Query: 327 DETTTRLRCPIRRRKTSPNLRDSAARLR 244
++TT P + P RDS + R
Sbjct: 164 EDTTMLGTSPSHTSMSGPCRRDSRSSAR 81
Score = 43.7 bits (89), Expect = 0.003
Identities = 29/94 (30%), Positives = 39/94 (41%)
Frame = -3 / -1
Query: 493 EEGHGHDAAHLAPVVAVHGEHHVLPLVREDVEDHVAGAGAELHALRVEHLPRQRRRRDHH 314
E H + HL PVVAV + +DV A E +R+EHL R R
Sbjct: 330 EHLHDANLTHLPPVVAVGCQEDAFAAAADDVHRGAARTVGEDEVVRLEHLLRSLRGGHDD 151
Query: 313 QVALPHPEEEDVAELAGQRGEVAVVEVVADLQPV 212
L P + + A AGQ + AV + D + V
Sbjct: 150 AGNLAEPHQHERAVPAGQSEQRAVRRQLCDHEVV 49
>gb|BE559455.1|BE559455 HV_CEb0024M12f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0024M12f, mRNA sequence
Length = 515
Score = 77.6 bits (163), Expect = 2e-013
Identities = 35/89 (39%), Positives = 52/89 (58%)
Frame = +2 / +2
Query: 251 LAALSRKFGDVFLLRMGQRNLVVVSSPPLAREVLHTQGVEFGSRTRNVVFDIFTDKGQDM 430
L L++K G V LR GQ + VVVSSP A+EVL + + F SR +V +IF G+++
Sbjct: 215 LRDLAKKHGPVMYLRFGQMDTVVVSSPAAAQEVLRDKDLSFASRPNILVSEIFCYGGRNV 394
Query: 431 VFTVYGDHWRKMRRIMTVPFFTNKVVQQY 517
+ YG +WR R++ TV V+Q+
Sbjct: 395 ILAPYGPYWRMTRKL*TVELLNEPKVRQF 481
Score = 41.4 bits (84), Expect = 0.016
Identities = 27/80 (33%), Positives = 36/80 (45%)
Frame = -1 / -3
Query: 513 CCTTLLVKKGTVMMRRILRQWSPYTVNTMSCPLSVKMSKTTLRVREPNSTPCVWSTSRAS 334
C T + TV R++RQ P P K+S+T + + N STS A+
Sbjct: 477 CRTLGSFRSSTVQSLRVIRQ*GP*GARMTLRPP*QKISETKMLGLDANERSLSRSTSCAA 298
Query: 333 GGDETTTRLRCPIRRRKTSP 274
G+ETTT P RR T P
Sbjct: 297 AGEETTTVSIWPNRRYMTGP 238
>gb|BJ547149.1|BJ547149 BJ547149 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal16j19 5', mRNA sequence
Length = 524
Score = 77.6 bits (163), Expect = 2e-013
Identities = 29/62 (46%), Positives = 44/62 (70%)
Frame = +2 / +2
Query: 1115 ITEPDTHNLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWYLAN 1294
I+E D +N+ YL+AVIKE+LRL PLL PH+ + D + GY +PA ++++VNAW +
Sbjct: 338 ISETDMNNMTYLRAVIKESLRLHPVAPLLAPHLAMADCIIDGYIVPAGTRVVVNAWAIGR 517
Query: 1295 NP 1300
+P
Sbjct: 518 DP 523
>gb|BM371202.2|BM371202 EBro04_SQ003_N08_R root, 3 week, salt-stressed, cv Optic, EBro04
Hordeum vulgare subsp. vulgare cDNA clone
EBro04_SQ003_N08 5', mRNA sequence
Length = 647
Score = 77.1 bits (162), Expect = 3e-013
Identities = 33/91 (36%), Positives = 52/91 (57%)
Frame = +2 / +2
Query: 929 EAQQKGEINEDNVLFIVENINVAAIETTLWSIEWAVAELVNHPEIQQKLRQELDTVLGPG 1108
+ Q + DN+ ++ ++ ET IEWA+AE++ P ++L++EL V+G
Sbjct: 245 DLQNTLRLTRDNIKAMIMDVMFGGTETVASGIEWAMAEMMQSPNELRRLQEELADVVGLD 424
Query: 1109 HQITEPDTHNLPYLQAVIKETLRLRMAIPLL 1201
+ E D LP+L+ VIKETLRL IP+L
Sbjct: 425 RNVDESDLDKLPFLKCVIKETLRLHPPIPIL 517
Score = 46.4 bits (95), Expect = 5e-004
Identities = 35/90 (38%), Positives = 42/90 (46%)
Frame = -1 / -3
Query: 1194 GMAIRSRSVSLITACR*GRLCVSGSVIWWPGPSTVSSSCRSFCWISGWFTSSATAHSIDH 1015
GM SRSVSLIT R G L S S + P+T +SS S G SA AHSI
Sbjct: 510 GMGGCSRSVSLITHLRKGSLSRSDSSTFRSRPTTSASSSCSRRSSLGLCIISAIAHSIPD 331
Query: 1014 SVVSIAATLMFSTMKSTLSSLISPFCCASS 925
+ VS+ + M LS + C SS
Sbjct: 330 ATVSVPPNITSMIMALMLSRVRRSVFCRSS 241
>gb|AL504160.1|AL504160 AL504160 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW04G02V 5', mRNA sequence
Length = 606
Score = 43.7 bits (89), Expect(3) = 4e-013
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +2 / -2
Query: 1202 VPHMNLHDAKLGGYDIPAESKILVNAWYLANNPDSW 1309
+PH K+GGY+IP + ++VN W +A +P W
Sbjct: 542 LPHKASASVKVGGYNIPKGANVMVNVWAVARDPKVW 435
Score = 41.8 bits (85), Expect(3) = 4e-013
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +2 / -2
Query: 1361 VEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPG 1504
++ G+DFR LPFG GRR CP ++ +F+ P G
Sbjct: 389 IDIKGSDFRVLPFGAGRRVCPGAQLGINLVASMIGHMLHHFKWSLPEG 246
Score = 36.8 bits (74), Expect = 0.37
Identities = 15/21 (71%), Positives = 15/21 (71%)
Frame = -1 / +1
Query: 1425 PGQLLRPTPKGRYLKSLPLAS 1363
PG LRP PKG LKSLPL S
Sbjct: 325 PGHTLRPAPKGSTLKSLPLMS 387
Score = 26.7 bits (52), Expect(3) = 4e-013
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +2 / -1
Query: 1145 YLQAVIKETLRLRMAIPLLV 1204
YL V+KE+LRL PL++
Sbjct: 600 YLMXVVKESLRLHPQTPLML 541
>gb|AL503971.1|AL503971 AL503971 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW01A09V 5', mRNA sequence
Length = 108
Score = 76.2 bits (160), Expect = 5e-013
Identities = 29/30 (96%), Positives = 29/30 (96%)
Frame = +2 / +1
Query: 416 KGQDMVFTVYGDHWRKMRRIMTVPFFTNKV 505
KG DMVFTVYGDHWRKMRRIMTVPFFTNKV
Sbjct: 19 KGXDMVFTVYGDHWRKMRRIMTVPFFTNKV 108
Score = 63.4 bits (132), Expect = 4e-009
Identities = 27/30 (90%), Positives = 28/30 (93%)
Frame = -1 / -2
Query: 504 TLLVKKGTVMMRRILRQWSPYTVNTMSCPL 415
TLLVKKGTVM+RRILRQWSP TVNTMS PL
Sbjct: 107 TLLVKKGTVMIRRILRQWSP*TVNTMSWPL 18
Score = 57.0 bits (118), Expect = 3e-007
Identities = 22/31 (70%), Positives = 23/31 (74%)
Frame = -3 / -1
Query: 502 LVGEEGHGHDAAHLAPVVAVHGEHHVLPLVR 410
LVGEEGH HD AHLAPVVA+ EHHV R
Sbjct: 105 LVGEEGHRHDPAHLAPVVAIDSEHHVXAFAR 13
Score = 50.6 bits (104), Expect = 3e-005
Identities = 20/25 (80%), Positives = 21/25 (84%)
Frame = +1 / +3
Query: 427 HGVHRVRRPLAQDAPHHDRALLHQQ 501
HGVH + RPLAQDAP HD ALLHQQ
Sbjct: 30 HGVHCLWRPLAQDAPDHDGALLHQQ 104
Score = 34.1 bits (68), Expect = 2.5
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = -2 / -3
Query: 500 CW*RRARS*CGASCAS 453
CW*RRA S* GASCAS
Sbjct: 103 CW*RRAPS*SGASCAS 56
>gb|CV063618.1|CV063618 BNEL91c9 Barley EST endosperm library Hordeum vulgare subsp. vulgare
cDNA clone BNEL91c9 5' similar to ent-kaurene oxidase,
mRNA sequence
Length = 730
Score = 65.2 bits (136), Expect(2) = 9e-013
Identities = 27/65 (41%), Positives = 36/65 (55%)
Frame = +2 / -2
Query: 1115 ITEPDTHNLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWYLAN 1294
+TE LPYL AV ETLRL +PL+ P KL GYD+PA ++I++N +
Sbjct: 630 VTEDHVPRLPYLSAVFHETLRLHSPVPLVPPRFVHETTKLAGYDVPAGTEIVINLYGCNM 451
Query: 1295 NPDSW 1309
N W
Sbjct: 450 NKKDW 436
Score = 29.0 bits (57), Expect(2) = 9e-013
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2 / -2
Query: 1013 LWSIEWAVAELVNHPEIQQKLRQELDTVLG 1102
L + EW + EL +PE Q +L Q + V G
Sbjct: 729 LLTTEWPMYELAKNPEKQDRLYQXIRXVCG 640
>gb|BF263362.2|BF263362 HV_CEa0006I19f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0006I19f, mRNA sequence
Length = 587
Score = 74.8 bits (157), Expect = 1e-012
Identities = 37/104 (35%), Positives = 54/104 (51%)
Frame = +2 / +3
Query: 209 GNWLQVGDDLNHRNLAALSRKFGDVFLLRMGQRNLVVVSSPPLAREVLHTQGVEFGSRTR 388
G+ V L HR + LSR+ G + LLR+ + +VV SS AREV+ F SR
Sbjct: 189 GHLHHVAGALPHRAMRDLSRRHGPLMLLRLCELRVVVASSSDAAREVMKNP*PAFASRPM 368
Query: 389 NVVFDIFTDKGQDMVFTVYGDHWRKMRRIMTVPFFTNKVVQQYR 520
+VF YGD WR++R+I T+ FT++ V+ +R
Sbjct: 369 TPTGTALLGDSPGIVFAPYGDAWRQLRKICTLELFTSRRVRSFR 500
Score = 41.4 bits (84), Expect = 0.016
Identities = 31/99 (31%), Positives = 38/99 (38%)
Frame = -3 / -1
Query: 496 GEEGHGHDAAHLAPVVAVHGEHHVLPLVREDVEDHVAGAGAELHALRVEHLPRQRRRRDH 317
GEE G D A L P VAV EH + E G E + + LPR R
Sbjct: 476 GEELEGADLAELPPRVAVGREHDARAVAEEGRPRRGHGPRRERRSWVLHDLPRGVGRGGD 297
Query: 316 HQVALPHPEEEDVAELAGQRGEVAVVEVVADLQPVPEDG 200
L E+ + AGQ AV E + V +DG
Sbjct: 296 DDAELAEAEQHERPVAAGQVPHRAVRERACHVVEVADDG 180
>gb|AV917238.1|AV917238 AV917238 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags18b09 5', mRNA sequence
Length = 615
Score = 74.8 bits (157), Expect = 1e-012
Identities = 27/56 (48%), Positives = 41/56 (73%)
Frame = +2 / +1
Query: 1115 ITEPDTHNLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAW 1282
+T+ D H LPYL+AVIKETLRL M PL+VPH+++ + + GY IP+ ++ +N +
Sbjct: 442 VTQDDLHGLPYLKAVIKETLRLHMPGPLMVPHLSMDECIINGYTIPSGTRTFINTY 609
Score = 34.5 bits (69), Expect = 1.8
Identities = 21/46 (45%), Positives = 27/46 (58%)
Frame = -1 / -2
Query: 1275 LTRILLSAGMSXPPSLASWRFMCGTSSGMAIRSRSVSLITACR*GR 1138
L ++ + G+ P + S GT SG + SRSVSLITA R*GR
Sbjct: 602 LMKVRVPDGIV*PFMMHSSMERWGTMSGPGM*SRSVSLITAFR*GR 465
>gb|BU995588.1|BU995588 HM10L15r HM Hordeum vulgare subsp. vulgare cDNA clone HM10L15
5-PRIME, mRNA sequence
Length = 615
Score = 74.8 bits (157), Expect = 1e-012
Identities = 35/96 (36%), Positives = 54/96 (56%)
Frame = +2 / +2
Query: 236 LNHRNLAALSRKFGDVFLLRMGQRNLVVVSSPPLAREVLHTQGVEFGSRTRNVVFDIFTD 415
L HR L L+ G + +L++GQ LVVVSS AR VL T F +R + + +I
Sbjct: 224 LPHRKLRDLADAHGPLMMLQLGQTPLVVVSSKETARLVLKTHDTNFATRPKLLAGEIVGY 403
Query: 416 KGQDMVFTVYGDHWRKMRRIMTVPFFTNKVVQQYRH 523
+ D++F+ GD+WRK+R++ + K V +RH
Sbjct: 404 EWADILFSPSGDYWRKLRQLCAAEILSPKRVLSFRH 511
Score = 63.4 bits (132), Expect = 4e-009
Identities = 36/93 (38%), Positives = 47/93 (50%)
Frame = -3 / -3
Query: 508 HDLVGEEGHGHDAAHLAPVVAVHGEHHVLPLVREDVEDHVAGAGAELHALRVEHLPRQRR 329
H L E+ G + A LAPVVA GE V PLV +D+ G G E+ + +EH R+
Sbjct: 496 HALGAEDLGGAELAELAPVVAGGGEEDVGPLVADDLAGEELGPGGEVGVVGLEHQTRRLL 317
Query: 328 RRDHHQVALPHPEEEDVAELAGQRGEVAVVEVV 230
R HHQ LP + A Q ++AV E V
Sbjct: 316 GRHHHQRRLPELQHHQRAVRVRQVPQLAVREHV 218
>gb|BF255383.2|BF255383 HVSMEf0006L09f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0006L09f, mRNA sequence
Length = 585
Score = 74.4 bits (156), Expect = 2e-012
Identities = 35/94 (37%), Positives = 53/94 (56%)
Frame = +2 / +1
Query: 233 DLNHRNLAALSRKFGDVFLLRMGQRNLVVVSSPPLAREVLHTQGVEFGSRTRNVVFDIFT 412
DL HR + +SR+ G + LR+G+ V+VSS A V+ T + F SR + DI
Sbjct: 193 DLPHRRMMKMSRQHGPLMHLRLGEVPTVIVSSAEAAALVMKTNDLNFASRPCSPSQDIIG 372
Query: 413 DKGQDMVFTVYGDHWRKMRRIMTVPFFTNKVVQQ 514
G ++F YGD WR+MR+I V ++K V++
Sbjct: 373 CGGTGIIFGPYGDRWRQMRKICIVELLSSKQVRR 474
>gb|AV926418.1|AV926418 AV926418 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp. vulgare
cDNA clone basd19e21 5', mRNA sequence
Length = 220
Score = 73.9 bits (155), Expect = 3e-012
Identities = 27/61 (44%), Positives = 41/61 (67%)
Frame = +2 / +1
Query: 1127 DTHNLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWYLANNPDS 1306
D L +L+ V+KETLRL P+L+P + D ++GGY +PA+++I VNAW + +P S
Sbjct: 25 DLAKLGHLKMVVKETLRLHPPAPMLLPREAMRDIQIGGYHVPAKTRIYVNAWAIGRDPTS 204
Query: 1307 W 1309
W
Sbjct: 205 W 207
>gb|BF065379.1|BF065379 HV_CEb0012E10f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0012E10f, mRNA sequence
Length = 620
Score = 69.3 bits (145), Expect(3) = 3e-012
Identities = 32/81 (39%), Positives = 46/81 (56%)
Frame = +2 / +1
Query: 278 DVFLLRMGQRNLVVVSSPPLAREVLHTQGVEFGSRTRNVVFDIFTDKGQDMVFTVYGDHW 457
D+ LLR+G +VVSSP A VL T SR R++V DI D+ F YG++W
Sbjct: 301 DLMLLRLGAVPTLVVSSPRAAEAVLRTHDHVLASRPRSLVPDIIMHGSSDIGFAPYGEYW 480
Query: 458 RKMRRIMTVPFFTNKVVQQYR 520
R+ R+++T + K VQ +R
Sbjct: 481 RQARKLVTTHMLSVKKVQSFR 543
Score = 24.0 bits (46), Expect(3) = 3e-012
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +1 / +1
Query: 34 RKDSKQALPPSPP 72
R + Q+LPPSPP
Sbjct: 178 RSSTGQSLPPSPP 216
Score = 21.7 bits (41), Expect(3) = 3e-012
Identities = 8/20 (40%), Positives = 10/20 (50%)
Frame = +1 / +3
Query: 55 LPPSPPRRHGPSLRGEAPGR 114
+PP P + P L PGR
Sbjct: 267 IPPPPRQETRPRLDAPPPGR 326
>gb|AV917240.1|AV917240 AV917240 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags18b11 5', mRNA sequence
Length = 586
Score = 54.7 bits (113), Expect(2) = 4e-012
Identities = 19/45 (42%), Positives = 28/45 (62%)
Frame = +2 / +3
Query: 1175 RLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWYLANNPDSW 1309
R+ +LVP + +LGGYDIPA + ++VNAW + +P SW
Sbjct: 3 RMHPPATMLVPRETMRPIRLGGYDIPANTMLMVNAWAIGRDPASW 137
Score = 37.3 bits (75), Expect(2) = 4e-012
Identities = 17/53 (32%), Positives = 20/53 (37%)
Frame = +2 / +3
Query: 1361 VEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQDKVD 1519
V+ NG + LPFG GRR CP L+ F P G D
Sbjct: 183 VDFNGGHYELLPFGAGRRICPGLAMGVANTEFILANLLYCFNWALPQGMRSED 341
>gb|AV922407.1|AV922407 AV922407 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags18b11 3', mRNA sequence
Length = 560
Score = 54.7 bits (113), Expect(2) = 4e-012
Identities = 19/45 (42%), Positives = 28/45 (62%)
Frame = +2 / -3
Query: 1175 RLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWYLANNPDSW 1309
R+ +LVP + +LGGYDIPA + ++VNAW + +P SW
Sbjct: 558 RMHPPATMLVPRETMRPIRLGGYDIPANTMLMVNAWAIGRDPASW 424
Score = 37.3 bits (75), Expect(2) = 4e-012
Identities = 17/53 (32%), Positives = 20/53 (37%)
Frame = +2 / -3
Query: 1361 VEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQDKVD 1519
V+ NG + LPFG GRR CP L+ F P G D
Sbjct: 378 VDFNGGHYELLPFGAGRRICPGLAMGVANTEFILANLLYCFNWALPQGMRSED 220
>gb|BE214490.1|BE214490 HV_CEb0003J19f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0003J19f, mRNA sequence
Length = 707
Score = 73.0 bits (153), Expect = 5e-012
Identities = 33/82 (40%), Positives = 46/82 (56%)
Frame = +2 / +3
Query: 278 DVFLLRMGQRNLVVVSSPPLAREVLHTQGVEFGSRTRNVVFDIFTDKGQDMVFTVYGDHW 457
D+ LLR+G N VVSSP A VL T SR+R+ V DI K D+ F YG+ W
Sbjct: 240 DLMLLRLGAVNTGVVSSPRAAAAVLRTHDHALASRSRSAVDDIIFYKRTDVAFAPYGEPW 419
Query: 458 RKMRRIMTVPFFTNKVVQQYRH 523
R+ R+++T + + V +RH
Sbjct: 420 RQARKVVTTHMLSARKVNSFRH 485
>gb|AV928038.1|AV928038 AV928038 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp. vulgare
cDNA clone basd13l05 3', mRNA sequence
Length = 622
Score = 54.7 bits (113), Expect(2) = 8e-012
Identities = 17/39 (43%), Positives = 28/39 (71%)
Frame = +2 / -2
Query: 1193 PLLVPHMNLHDAKLGGYDIPAESKILVNAWYLANNPDSW 1309
P+L+P + D ++GGY +PA+++I VNAW + +P SW
Sbjct: 579 PMLLPREAMRDIQIGGYHVPAKTRIYVNAWAIGRDPTSW 463
Score = 36.3 bits (73), Expect(2) = 8e-012
Identities = 14/48 (29%), Positives = 18/48 (37%)
Frame = +2 / -2
Query: 1361 VEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPG 1504
++ G F PFG GRR CP L+ F+ P G
Sbjct: 414 IDFKGTHFELTPFGAGRRICPALSMSTATVEFTLANLLYRFQWTLPEG 271
>gb|AV917724.1|AV917724 AV917724 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags11c24 3', mRNA sequence
Length = 578
Score = 53.8 bits (111), Expect(2) = 8e-012
Identities = 18/38 (47%), Positives = 26/38 (68%)
Frame = +2 / -2
Query: 1196 LLVPHMNLHDAKLGGYDIPAESKILVNAWYLANNPDSW 1309
+LVP + +LGGYDIPA + ++VNAW + +P SW
Sbjct: 559 MLVPRETMRPIRLGGYDIPANTMLMVNAWAIGRDPASW 446
Score = 37.3 bits (75), Expect(2) = 8e-012
Identities = 17/53 (32%), Positives = 20/53 (37%)
Frame = +2 / -2
Query: 1361 VEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQDKVD 1519
V+ NG + LPFG GRR CP L+ F P G D
Sbjct: 400 VDFNGGHYELLPFGAGRRICPGLAMGVANTEFILANLLYCFNWALPQGMRSED 242
>gb|CA009374.1|CA009374 HU13P05r HU Hordeum vulgare subsp. vulgare cDNA clone HU13P05
5-PRIME, mRNA sequence
Length = 537
Score = 38.2 bits (77), Expect(3) = 9e-012
Identities = 17/50 (34%), Positives = 20/50 (40%)
Frame = +2 / +1
Query: 1361 VEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQD 1510
V G+D R PFG GRR CP +L+ FE P D
Sbjct: 232 VSVLGSDLRLAPFGAGRRVCPGKMLALATVHLWLAQLLHRFEWAPSGSVD 381
Score = 36.8 bits (74), Expect(3) = 9e-012
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = +2 / +1
Query: 1217 LHDAKLGGYDIPAESKILVNAWYLANNPDSW 1309
+HDA +GG+ +PA + +VN W +A++ W
Sbjct: 94 VHDAHVGGHLVPAGTTAMVNMWAIAHDAAVW 186
Score = 32.7 bits (65), Expect(3) = 9e-012
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +2 / +1
Query: 1139 LPYLQAVIKETLRLRMAIPLL 1201
LPY+Q ++KETLR+ PLL
Sbjct: 13 LPYIQCIVKETLRMHPPGPLL 75
>gb|BJ466231.1|BJ466231 BJ466231 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags31e07 3', mRNA sequence
Length = 580
Score = 53.3 bits (110), Expect(2) = 1e-011
Identities = 19/48 (39%), Positives = 29/48 (60%)
Frame = +2 / -1
Query: 1157 VIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWYLANNP 1300
V+ T R+ +LVP + +LGGYDIPA + ++VNAW + +P
Sbjct: 577 VLSXTFRMHPPATMLVPRETMRPIRLGGYDIPANTMLMVNAWAIGRDP 434
Score = 37.3 bits (75), Expect(2) = 1e-011
Identities = 17/53 (32%), Positives = 20/53 (37%)
Frame = +2 / -2
Query: 1361 VEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQDKVD 1519
V+ NG + LPFG GRR CP L+ F P G D
Sbjct: 378 VDFNGGHYELLPFGAGRRICPGLAMGVANTEFILANLLYCFNWALPQGMRSED 220
>gb|BE420941.1|BE420941 HWM004.B06 ITEC HWM Barley Leaf Library Hordeum vulgare subsp.
vulgare cDNA clone HWM004.B06, mRNA sequence
Length = 1155
Score = 71.6 bits (150), Expect = 1e-011
Identities = 30/46 (65%), Positives = 32/46 (69%)
Frame = +2 / +2
Query: 1502 GQDKVDTTEKGGQFSLHILKHSTIVCKPRTL*EQPTRRFHAEQSNV 1639
GQDK+DTTEKGGQFSLHILKHSTIV KPR * R S +
Sbjct: 110 GQDKLDTTEKGGQFSLHILKHSTIVAKPRVF*SSGVRALGVRASGI 247
Score = 69.3 bits (145), Expect = 6e-011
Identities = 27/32 (84%), Positives = 29/32 (90%)
Frame = -1 / -1
Query: 1596 *SVLGLHTMVECFKMWRLNWPPFSVVSTLSCP 1501
*+ LGL TMVECFKMWRLNWPPFSVVS+LS P
Sbjct: 204 *NTLGLATMVECFKMWRLNWPPFSVVSSLSWP 109
Score = 57.4 bits (119), Expect = 2e-007
Identities = 22/35 (62%), Positives = 24/35 (68%)
Frame = +1 / +1
Query: 1507 GQGXHHREGRPVQSPHLEAFHHRVQAKNALRAAHT 1611
GQ HH EGRPVQ PHLEA HHR QA++ L T
Sbjct: 115 GQARHHGEGRPVQPPHLEALHHRGQAQSVLEQRRT 219
Score = 52.8 bits (109), Expect = 6e-006
Identities = 18/26 (69%), Positives = 19/26 (73%)
Frame = -2 / -2
Query: 1583 ACTRWWNASRCGD*TGLPSRWCXPCP 1506
A RWW+ASRCG *TG PS WC CP
Sbjct: 191 AWPRWWSASRCGG*TGRPSPWCRACP 114
Score = 40.0 bits (81), Expect = 0.041
Identities = 17/29 (58%), Positives = 20/29 (68%)
Frame = -3 / -3
Query: 1618 EPTCGLLLKRSWLAHDGGMLQDVETELAS 1532
E T L+ S L HDGG+LQDVE ELA+
Sbjct: 226 ESTYAAALEHSGLGHDGGVLQDVEAELAA 140
>gb|BI950331.1|BI950331 HVSMEl0020E12f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0020E12f, mRNA sequence
Length = 985
Score = 71.6 bits (150), Expect = 1e-011
Identities = 32/82 (39%), Positives = 44/82 (53%)
Frame = +2 / +1
Query: 224 VGDDLNHRNLAALSRKFGDVFLLRMGQRNLVVVSSPPLAREVLHTQGVEFGSRTRNVVFD 403
VG + HR + L R+ G + LLR+G+ VVVSS A V++T F R + D
Sbjct: 25 VGGGVPHRKITELCRRHGPLMLLRLGEVPAVVVSSAEAAALVMNTNDPVFADRPSSATVD 204
Query: 404 IFTDKGQDMVFTVYGDHWRKMR 469
I ++F +YGDHWR MR
Sbjct: 205 IAGXGATGIIFALYGDHWRHMR 270
Score = 51.5 bits (106), Expect = 1e-005
Identities = 31/87 (35%), Positives = 37/87 (42%)
Frame = -3 / -2
Query: 484 HGHDAAHLAPVVAVHGEHHVLPLVREDVEDHVAGAGAELHALRVEHLPRQRRRRDHHQVA 305
H AH+APVVAV GE DV A E + V H R+ DHH
Sbjct: 285 HDGHLAHVAPVVAVEGEDDARGAAPGDVHRGAARPVREHGVVGVHHQRRRLGAGDHHGGD 106
Query: 304 LPHPEEEDVAELAGQRGEVAVVEVVAD 224
LP PEE A Q ++ V + AD
Sbjct: 105 LPEPEEHQRPVPAAQLRDLPVRDAAAD 25
>gb|BM098719.2|BM098719 EBem08_SQ003_O03_R embryo, 40 DPA, no treatment, cv Optic, EBem08
Hordeum vulgare subsp. vulgare cDNA clone
EBem08_SQ003_O03 5', mRNA sequence
Length = 424
Score = 71.2 bits (149), Expect = 2e-011
Identities = 30/96 (31%), Positives = 52/96 (54%)
Frame = +2 / +3
Query: 950 INEDNVLFIVENINVAAIETTLWSIEWAVAELVNHPEIQQKLRQELDTVLGPGHQITEPD 1129
+ E+ ++ + + A +T+ ++EW + L+ P Q+++ E+ G +ITE D
Sbjct: 135 LGEEELVTLCSEVMSAGTDTSATALEWVMMHLILDPAAQERVYDEVVAKAGKTARITEAD 314
Query: 1130 THNLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLG 1237
+LPYLQAV+KET R ++ H DA+LG
Sbjct: 315 VESLPYLQAVVKETFRRHPPSHFVLSHAATRDAELG 422
Score = 42.3 bits (86), Expect = 0.008
Identities = 29/95 (30%), Positives = 45/95 (47%)
Frame = -1 / -1
Query: 1239 PPSLASWRFMCGTSSGMAIRSRSVSLITACR*GRLCVSGSVIWWPGPSTVSSSCRSFCWI 1060
PPS AS C ++ + R+VS TACR*G+ S SVI P+ ++S +
Sbjct: 424 PPSSASLVAACDSTKWLGGCRRNVSFTTACR*GKDSTSASVIRAVLPALATTSS*TLSCA 245
Query: 1059 SGWFTSSATAHSIDHSVVSIAATLMFSTMKSTLSS 955
+G HS ++VS+ A + ++ SS
Sbjct: 244 AGSRMRCIMTHSSAVALVSVPALITSEQSVTSSSS 140
Score = 35.4 bits (71), Expect = 0.97
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = -3 / -3
Query: 1237 AELGVVEVHVRHQQRDGHPQPQRLLDHRLQVGE 1139
A+LGV VR + P+RLL HRLQVG+
Sbjct: 422 AQLGVPRRRVRQHEVARRVPPERLLHHRLQVGQ 324
>gb|CA016903.1|CA016903 HV05M12u HV Hordeum vulgare subsp. vulgare cDNA clone HV05M12
3-PRIME, mRNA sequence
Length = 467
Score = 41.4 bits (84), Expect(3) = 2e-011
Identities = 17/44 (38%), Positives = 20/44 (45%)
Frame = +2 / -2
Query: 1373 GNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPG 1504
G+ F YLPFG GRR CP RL+ F+ P G
Sbjct: 277 GSRFEYLPFGTGRRKCPGDTFGLATLELAVTRLLYYFDWSLPAG 146
Score = 35.4 bits (71), Expect(3) = 2e-011
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = +2 / -3
Query: 1157 VIKETLRLRMAIPLLVPHM 1213
VIKET+RL +PLLVPH+
Sbjct: 462 VIKETMRLNPVVPLLVPHL 406
Score = 29.5 bits (58), Expect(3) = 2e-011
Identities = 8/17 (47%), Positives = 14/17 (82%)
Frame = +2 / -2
Query: 1259 SKILVNAWYLANNPDSW 1309
+++LVNAW +A +P+ W
Sbjct: 385 TRVLVNAWAMARSPEYW 335
>gb|BE420993.1|BE420993 HWM004.F10 ITEC HWM Barley Leaf Library Hordeum vulgare subsp.
vulgare cDNA clone HWM004.F10, mRNA sequence
Length = 1299
Score = 70.3 bits (147), Expect = 3e-011
Identities = 30/70 (42%), Positives = 42/70 (60%)
Frame = +2 / +2
Query: 314 VVVSSPPLAREVLHTQGVEFGSRTRNVVFDIFTDKGQDMVFTVYGDHWRKMRRIMTVPFF 493
+VVSSP + VL T F SR ++V +I D+ F+ YG+HWR++R+I T
Sbjct: 107 LVVSSPSAGQAVLRTHDHVFASRPYSLVSEILFYGPSDVAFSPYGEHWRQVRKIATTHLL 286
Query: 494 TNKVVQQYRH 523
TNK V+ YRH
Sbjct: 287 TNKKVRSYRH 316
>gb|BJ464493.1|BJ464493 BJ464493 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags34j09 5', mRNA sequence
Length = 523
Score = 69.8 bits (146), Expect = 4e-011
Identities = 26/47 (55%), Positives = 36/47 (76%)
Frame = +2 / +1
Query: 1115 ITEPDTHNLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPA 1255
+T+ D H LPYL+AVIKETLRL M PL+VPH+++ + + GY IP+
Sbjct: 349 VTQDDLHGLPYLKAVIKETLRLHMPGPLMVPHLSMDECIINGYTIPS 489
Score = 34.1 bits (68), Expect = 2.5
Identities = 17/23 (73%), Positives = 18/23 (78%)
Frame = -1 / -3
Query: 1206 GTSSGMAIRSRSVSLITACR*GR 1138
GT SG + SRSVSLITA R*GR
Sbjct: 440 GTMSGPGM*SRSVSLITAFR*GR 372
>gb|BE196002.1|BE196002 HVSMEh0091B12f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0091B12f, mRNA sequence
Length = 904
Score = 68.9 bits (144), Expect(2) = 6e-011
Identities = 32/81 (39%), Positives = 46/81 (56%)
Frame = +2 / +3
Query: 278 DVFLLRMGQRNLVVVSSPPLAREVLHTQGVEFGSRTRNVVFDIFTDKGQDMVFTVYGDHW 457
DV LLR+G +VVSSP A VL T SR R++V DI D+ F YG++W
Sbjct: 210 DVMLLRLGAVPTLVVSSPRAAEAVLRTHDHVLASRPRSLVTDIIMYGSSDIGFAPYGEYW 389
Query: 458 RKMRRIMTVPFFTNKVVQQYR 520
R+ R+++T + K V+ +R
Sbjct: 390 RQARKLVTTHMLSVKKVRSFR 452
Score = 23.1 bits (44), Expect(2) = 6e-011
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +1 / +3
Query: 34 RKDSKQALPPSPP 72
R + Q LPPSPP
Sbjct: 87 RSSTGQRLPPSPP 125
>gb|BI952693.1|BI952693 HVSMEm0007G18f Hordeum vulgare green seedling EST library HVcDNA0014
(Blumeria infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEm0007G18f, mRNA sequence
Length = 426
Score = 69.3 bits (145), Expect = 6e-011
Identities = 30/85 (35%), Positives = 52/85 (61%)
Frame = +2 / +1
Query: 950 INEDNVLFIVENINVAAIETTLWSIEWAVAELVNHPEIQQKLRQELDTVLGPGHQITEPD 1129
+ DN+ ++ ++ + ET +I WA+AE+++ P+ ++L++EL +G + E D
Sbjct: 67 LRRDNIKAMMMDVMLGGTETAACAIYWAMAEMMHRPDDLRRLQKELFYTVGLDRNVNE*D 246
Query: 1130 THNLPYLQAVIKETLRLRMAIPLLV 1204
L +L+ VIKETLRL IPLL+
Sbjct: 247 LDKLHFLKCVIKETLRLHPPIPLLL 321
Score = 41.4 bits (84), Expect = 0.016
Identities = 38/102 (37%), Positives = 45/102 (44%)
Frame = -1 / -2
Query: 1200 SSGMAIRSRSVSLITACR*GRLCVSGSVIWWPGPSTVSSSCRSFCWISGWFTSSATAHSI 1021
SSGM SRSVSL+T R L S S + P+ SS + SG SA A I
Sbjct: 317 SSGMGGCSRSVSLMTHLRKWSLSRSHSFTFRSRPTV*KSSFCNRRRSSGLCIISAMAQ*I 138
Query: 1020 DHSVVSIAATLMFSTMKSTLSSLISPFCCASSM*SMAHLRPL 895
H+ VS+ + M LS L SS S A L PL
Sbjct: 137 AHAAVSVPPNITSIIMALMLSRLSRSVFYTSSPRSQAALDPL 12
>gb|AV836678.1|AV836678 AV836678 K. Sato unpublished cDNA library: Hordeum vulgare subsp.
vulgare seedling leaves second leaf stage Hordeum vulgare
subsp. vulgare cDNA clone basd23p07, mRNA sequence
Length = 501
Score = 68.9 bits (144), Expect = 8e-011
Identities = 25/63 (39%), Positives = 47/63 (74%)
Frame = +2 / +2
Query: 914 IDHILEAQQKGEINEDNVLFIVENINVAAIETTLWSIEWAVAELVNHPEIQQKLRQELDT 1093
+D + ++K ++++D V ++ ++ A ++TT+ S+EWA+AELV +P +QQKL++ELD
Sbjct: 248 VDALFTLREKYDLSDDTVFGLLWDMITAGMDTTVISVEWAMAELVRNPRVQQKLQEELDN 427
Query: 1094 VLG 1102
V+G
Sbjct: 428 VVG 436
Score = 58.3 bits (121), Expect = 1e-007
Identities = 29/54 (53%), Positives = 35/54 (64%)
Frame = -1 / -1
Query: 1101 PSTVSSSCRSFCWISGWFTSSATAHSIDHSVVSIAATLMFSTMKSTLSSLISPF 940
P+T+SSS SFC G+ TSSA AHS D +VVSI A +M T+SSL S F
Sbjct: 435 PTTLSSSSCSFCCTLGFLTSSAMAHSTDMTVVSIPAVIMSHRSPKTVSSLRSYF 274
>gb|BF627063.2|BF627063 HVSMEb0002G10f Hordeum vulgare seedling shoot EST library HVcDNA0002
(Dehydration stress) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEb0002G10f, mRNA sequence
Length = 683
Score = 68.9 bits (144), Expect = 8e-011
Identities = 30/77 (38%), Positives = 42/77 (54%)
Frame = +2 / +1
Query: 1079 QELDTVLGPGHQITEPDTHNLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAE 1258
+ELD V+G Q+ E D L Y++A I+E RL P VPH+ L D + GY +P
Sbjct: 19 EELDRVVGRERQVQESDIPQLNYVKACIREAFRLHPIAPFNVPHVALADTVVAGYRVPKG 198
Query: 1259 SKILVNAWYLANNPDSW 1309
S +L++ L NP W
Sbjct: 199 SHVLLSRLGLGRNPAIW 249
>gb|BF261803.3|BF261803 HV_CEa0002E08f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0002E08f, mRNA sequence
Length = 850
Score = 68.9 bits (144), Expect = 8e-011
Identities = 31/75 (41%), Positives = 39/75 (52%)
Frame = +2 / +1
Query: 302 QRNLVVVSSPPLAREVLHTQGVEFGSRTRNVVFDIFTDKGQDMVFTVYGDHWRKMRRIMT 481
Q +VVSSP A VL TQ F SR N V D D G D+ F YG+ WR+ RR++T
Sbjct: 1 QTRALVVSSPRAAEAVLRTQDHVFASRPTNAVVDALLDGGADIAFVPYGEFWRQARRLVT 180
Query: 482 VPFFTNKVVQQYRHG 526
+ + V R G
Sbjct: 181 THLLSARKVHSLRRG 225
>gb|BJ471507.1|BJ471507 BJ471507 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal18p14 5', mRNA sequence
Length = 341
Score = 68.4 bits (143), Expect = 1e-010
Identities = 29/66 (43%), Positives = 44/66 (66%)
Frame = +2 / +1
Query: 1007 TTLWSIEWAVAELVNHPEIQQKLRQELDTVLGPGHQITEPDTHNLPYLQAVIKETLRLRM 1186
T +IEWA+AE+++ P+ ++L++EL +G + E D LP+L+ VIKETLRL
Sbjct: 25 TVASAIEWAMAEMMHSPDDLRRLQKELVDTVGLDRNVNESDLDKLPFLKCVIKETLRLHP 204
Query: 1187 AIPLLV 1204
IPLL+
Sbjct: 205 PIPLLL 222
Score = 38.6 bits (78), Expect = 0.11
Identities = 28/65 (43%), Positives = 34/65 (52%)
Frame = -1 / -1
Query: 1200 SSGMAIRSRSVSLITACR*GRLCVSGSVIWWPGPSTVSSSCRSFCWISGWFTSSATAHSI 1021
SSGM SRSVSL+T R G L S S + P+ +SS + SG SA AHSI
Sbjct: 218 SSGMGGCSRSVSLMTHLRKGSLSRSDSFTFRSRPTVSTSSFCNRRRSSGLCIISAIAHSI 39
Query: 1020 DHSVV 1006
+ V
Sbjct: 38 ADATV 24
>gb|BG299722.1|BG299722 HVSMEa0021I20f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0021I20f, mRNA sequence
Length = 828
Score = 68.0 bits (142), Expect = 2e-010
Identities = 33/94 (35%), Positives = 50/94 (53%)
Frame = +2 / +3
Query: 242 HRNLAALSRKFGDVFLLRMGQRNLVVVSSPPLAREVLHTQGVEFGSRTRNVVFDIFTDKG 421
HR+L L+R G V L++G +VVSSP A+EVL T V SR + + T
Sbjct: 204 HRSLQRLARSLGPVVHLQLGGVAAIVVSSPEAAKEVLKTHDVHCCSRPSSPGAKLITYGN 383
Query: 422 QDMVFTVYGDHWRKMRRIMTVPFFTNKVVQQYRH 523
QD+ F+ Y WR+ R++ ++K VQ + +
Sbjct: 384 QDIAFSPYNASWRERRKLFVSELVSSKRVQSFAY 485
Score = 41.4 bits (84), Expect = 0.016
Identities = 20/42 (47%), Positives = 22/42 (52%)
Frame = -1 / -3
Query: 366 TPCVWSTSRASGGDETTTRLRCPIRRRKTSPNLRDSAARLRW 241
T CV STS A+ GD+TT P R T P LR S RW
Sbjct: 328 TSCVLSTSLAASGDDTTMAATPPSCRWTTGPRLRASLCSDRW 203
Score = 36.3 bits (73), Expect = 0.51
Identities = 24/70 (34%), Positives = 31/70 (44%)
Frame = -3 / -2
Query: 469 AHLAPVVAVHGEHHVLPLVREDVEDHVAGAGAELHALRVEHLPRQRRRRDHHQVALPHPE 290
A LAP V E VL V + G+ A + +R+EHL RRR H +
Sbjct: 431 APLAPACVVRRERDVLVAVGDQFCTW*RGSAAAMDIMRLEHLLGSLRRRHHDGRDAAKLQ 252
Query: 289 EEDVAELAGQ 260
+D A AGQ
Sbjct: 251 VDDGA*AAGQ 222
>gb|BF627742.1|BF627742 HVSMEb0005K21f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0005K21f, mRNA sequence
Length = 818
Score = 68.0 bits (142), Expect = 2e-010
Identities = 31/81 (38%), Positives = 44/81 (54%)
Frame = +2 / +3
Query: 281 VFLLRMGQRNLVVVSSPPLAREVLHTQGVEFGSRTRNVVFDIFTDKGQDMVFTVYGDHWR 460
+ L+R+G +VVS+P A+ VL T F SR + V I D+VF YG HWR
Sbjct: 234 LMLVRLGAVPTLVVSTPAAAQAVLRTHDHVFASRPHSPVAHILFYGSADVVFAPYGHHWR 413
Query: 461 KMRRIMTVPFFTNKVVQQYRH 523
++++I T T + V YRH
Sbjct: 414 QVKKISTTHLLTARKVHSYRH 476
Score = 49.6 bits (102), Expect = 5e-005
Identities = 25/59 (42%), Positives = 33/59 (55%)
Frame = -3 / -1
Query: 496 GEEGHGHDAAHLAPVVAVHGEHHVLPLVREDVEDHVAGAGAELHALRVEHLPRQRRRRD 320
GE+ G + LAPVVAV E V + EDV D G+G E +R +H R+ RRR+
Sbjct: 449 GEQVGGGNLLDLAPVVAVGSEDDVRGTIEEDVGDGGVGSGREHVVVRAQHCLRRSRRRN 273
Score = 35.0 bits (70), Expect = 1.3
Identities = 26/77 (33%), Positives = 34/77 (44%)
Frame = -1 / -2
Query: 522 WRYCCTTLLVKKGTVMMRRILRQWSPYTVNTMSCPLSVKMSKTTLRVREPNSTPCVWSTS 343
WR T L V + V + RQW P T S +M T + N+ CV ST+
Sbjct: 475 WR*EWTFLAVSRWVVEIFLTWRQWWP*GAKTTSAEP*KRMWATGEWGLDANTWSCVRSTA 296
Query: 342 RASGGDETTTRLRCPIR 292
A+ G ETT+ P R
Sbjct: 295 CAAAGVETTSVGTAPRR 245
>gb|BE195103.3|BE195103 HVSMEh0088E21f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0088E21f, mRNA sequence
Length = 610
Score = 68.0 bits (142), Expect = 2e-010
Identities = 33/94 (35%), Positives = 50/94 (53%)
Frame = +2 / +2
Query: 242 HRNLAALSRKFGDVFLLRMGQRNLVVVSSPPLAREVLHTQGVEFGSRTRNVVFDIFTDKG 421
HR+L L+R G V L++G +VVSSP A+EVL T V SR + + T
Sbjct: 203 HRSLQRLARSLGPVVHLQLGGVAAIVVSSPEAAKEVLKTHDVHCCSRPSSPGAKLITYGN 382
Query: 422 QDMVFTVYGDHWRKMRRIMTVPFFTNKVVQQYRH 523
QD+ F+ Y WR+ R++ ++K VQ + +
Sbjct: 383 QDIAFSPYNASWRERRKLFVSELVSSKRVQSFAY 484
Score = 41.4 bits (84), Expect = 0.016
Identities = 20/42 (47%), Positives = 22/42 (52%)
Frame = -1 / -2
Query: 366 TPCVWSTSRASGGDETTTRLRCPIRRRKTSPNLRDSAARLRW 241
T CV STS A+ GD+TT P R T P LR S RW
Sbjct: 327 TSCVLSTSLAASGDDTTMAATPPSCRWTTGPRLRASLCSDRW 202
Score = 36.3 bits (73), Expect = 0.51
Identities = 24/70 (34%), Positives = 31/70 (44%)
Frame = -3 / -1
Query: 469 AHLAPVVAVHGEHHVLPLVREDVEDHVAGAGAELHALRVEHLPRQRRRRDHHQVALPHPE 290
A LAP V E VL V + G+ A + +R+EHL RRR H +
Sbjct: 430 APLAPACVVRRERDVLVAVGDQFCTW*RGSAAAMDIMRLEHLLGSLRRRHHDGRDAAKLQ 251
Query: 289 EEDVAELAGQ 260
+D A AGQ
Sbjct: 250 VDDGA*AAGQ 221
>gb|BJ452702.1|BJ452702 BJ452702 K. Sato unpublished cDNA library, cv. Akashinriki vegetative
stage leaves Hordeum vulgare subsp. vulgare cDNA clone
baak40b01 5', mRNA sequence
Length = 205
Score = 68.0 bits (142), Expect = 2e-010
Identities = 23/53 (43%), Positives = 35/53 (66%)
Frame = +2 / +1
Query: 1151 QAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWYLANNPDSW 1309
QAV+KETLRL +PLL+P ++ + GY+IP +++LVN W + +P W
Sbjct: 34 QAVVKETLRLHPVVPLLIPRVSREHTSIAGYEIPVGTRVLVNVWAIGRDPTVW 192
>gb|BQ664118.1|BQ664118 HV01P03w HV Hordeum vulgare subsp. vulgare cDNA clone HV01P03
3-PRIME, mRNA sequence
Length = 591
Score = 49.2 bits (101), Expect(2) = 2e-010
Identities = 17/38 (44%), Positives = 25/38 (65%)
Frame = +2 / -2
Query: 1196 LLVPHMNLHDAKLGGYDIPAESKILVNAWYLANNPDSW 1309
+LVP + +LGGYDI A + ++VNAW + +P SW
Sbjct: 584 MLVPRETMRPIRLGGYDIXANTMLVVNAWAIGRDPASW 471
Score = 37.3 bits (75), Expect(2) = 2e-010
Identities = 17/53 (32%), Positives = 20/53 (37%)
Frame = +2 / -2
Query: 1361 VEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQDKVD 1519
V+ NG + LPFG GRR CP L+ F P G D
Sbjct: 425 VDFNGGHYELLPFGAGRRICPGLAMGVANTEFILANLLYCFNWALPQGMRSED 267
>gb|CA012725.1|CA012725 HT06E05r HT Hordeum vulgare subsp. vulgare cDNA clone HT06E05
5-PRIME, mRNA sequence
Length = 700
Score = 36.8 bits (74), Expect(3) = 3e-010
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = +2 / +1
Query: 1115 ITEPDTHNLPYLQAVIKETLRLRMAIPLL 1201
++E LPYL+ VI+ETLRL +PLL
Sbjct: 28 VSEDALSELPYLRIVIRETLRLHAPLPLL 114
Score = 36.3 bits (73), Expect = 0.51
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = -1 / -3
Query: 1497 GGSSSKFWTRRPMVMPRMGRARMIPGQLLRPTPKGRYLKSLP 1372
G S SK+ +R R +PG +LRP PKG KS P
Sbjct: 413 GSSQSKWKSRLASGSSTPARPNAMPGHILRPAPKGTNAKSPP 288
Score = 32.7 bits (65), Expect(3) = 3e-010
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +2 / +1
Query: 1373 GNDFRYLPFGVGRRSCP 1423
G D ++PFG GRR CP
Sbjct: 289 GGDLAFVPFGAGRRMCP 339
Score = 32.7 bits (65), Expect(3) = 3e-010
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +2 / +1
Query: 1238 GYDIPAESKILVNAWYLANNPDSW 1309
GYD+P +++LVN W L + W
Sbjct: 148 GYDVPRGTQVLVNGWALCRDERYW 219
>gb|CA020248.1|CA020248 HV14M03r HV Hordeum vulgare subsp. vulgare cDNA clone HV14M03
5-PRIME, mRNA sequence
Length = 578
Score = 66.6 bits (139), Expect = 4e-010
Identities = 27/77 (35%), Positives = 44/77 (57%)
Frame = +2 / +2
Query: 290 LRMGQRNLVVVSSPPLAREVLHTQGVEFGSRTRNVVFDIFTDKGQDMVFTVYGDHWRKMR 469
L+ Q ++V +SP ARE++ T V F SR + +F + +VF YGD WR++R
Sbjct: 11 LKFCQLPVLVATSPDAAREIMKTHDVAFASRPLSPTMQLFLRGSEGLVFAPYGDGWRQLR 190
Query: 470 RIMTVPFFTNKVVQQYR 520
+I T+ +N+ V +R
Sbjct: 191 KICTLELLSNRRVHSFR 241
>gb|BG301073.1|BG301073 HVSMEb0019H09f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0019H09f, mRNA sequence
Length = 578
Score = 66.1 bits (138), Expect = 6e-010
Identities = 30/81 (37%), Positives = 43/81 (53%)
Frame = +2 / +3
Query: 281 VFLLRMGQRNLVVVSSPPLAREVLHTQGVEFGSRTRNVVFDIFTDKGQDMVFTVYGDHWR 460
+ L+R+G +VVS+P A+ VL T F R + V I D+VF YG HWR
Sbjct: 123 LMLVRLGAVPTLVVSTPAAAQAVLRTHDHVFAXRPHSPVAHILFYGSADVVFAPYGHHWR 302
Query: 461 KMRRIMTVPFFTNKVVQQYRH 523
++++I T T + V YRH
Sbjct: 303 QVKKISTTHLLTARKVHSYRH 365
Score = 46.4 bits (95), Expect = 5e-004
Identities = 24/59 (40%), Positives = 32/59 (54%)
Frame = -3 / -1
Query: 496 GEEGHGHDAAHLAPVVAVHGEHHVLPLVREDVEDHVAGAGAELHALRVEHLPRQRRRRD 320
GE+ G + LAPVVAV E V + EDV D G+ E +R +H R+ RRR+
Sbjct: 338 GEQVGGGNLLDLAPVVAVGSEDDVRGTIEEDVGDGGVGSXREHVVVRAQHCLRRSRRRN 162
>gb|BE196643.3|BE196643 HVSMEh0092N21f Hordeum vulgare 5-45 DAP spike EST library HVcDNA0009
(5 to 45 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEh0092N21f, mRNA sequence
Length = 903
Score = 61.6 bits (128), Expect(2) = 6e-010
Identities = 30/84 (35%), Positives = 44/84 (52%)
Frame = +2 / +2
Query: 950 INEDNVLFIVENINVAAIETTLWSIEWAVAELVNHPEIQQKLRQELDTVLGPGHQITEPD 1129
++ D + ++ +I A ET ++EWA+AELV +P K E+ G + E D
Sbjct: 215 LDMDAIKSVIMDILGAGSETAATTLEWAMAELVKNPRAMHKATAEVRRAFHAGGTVAEQD 394
Query: 1130 THNLPYLQAVIKETLRLRMAIPLL 1201
L YL+ VI ETLR IPL+
Sbjct: 395 LTELAYLRLVILETLRADPPIPLV 466
Score = 35.0 bits (70), Expect = 1.3
Identities = 25/72 (34%), Positives = 34/72 (47%)
Frame = -1 / -1
Query: 1200 SSGMAIRSRSVSLITACR*GRLCVSGSVIWWPGPSTVSSSCRSFCWISGWFTSSATAHSI 1021
+SGM +R+VS +T R S S P +S + C G+ TSSA AHS
Sbjct: 465 TSGMGGSARNVSKMTRRRYASSVRSCSATVPPAWKARRTSAVALCMALGFLTSSAMAHSS 286
Query: 1020 DHSVVSIAATLM 985
+ VS+ A M
Sbjct: 285 VVAAVSLPAPNM 250
Score = 23.1 bits (44), Expect(2) = 6e-010
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = +2 / +2
Query: 1238 GYDIPAESKILVNAWYLANNPDSW 1309
G D+ +++LVNAW + W
Sbjct: 500 GDDVARGTQVLVNAWAPGRDERYW 571
>gb|BF066135.3|BF066135 HV_CEb0014P04f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0014P04f, mRNA sequence
Length = 900
Score = 50.6 bits (104), Expect(2) = 8e-010
Identities = 23/54 (42%), Positives = 34/54 (62%)
Frame = +2 / +3
Query: 236 LNHRNLAALSRKFGDVFLLRMGQRNLVVVSSPPLAREVLHTQGVEFGSRTRNVV 397
L HR + +L+ G V LLR+G+ +VVVSSP A EV+ + + F SR R+ +
Sbjct: 273 LPHRAMRSLAAAHGPVLLLRLGRVPVVVVSSPAAAEEVMRIRDLTFASRPRSAM 434
Score = 33.6 bits (67), Expect(2) = 8e-010
Identities = 10/34 (29%), Positives = 20/34 (58%)
Frame = +2 / +3
Query: 419 GQDMVFTVYGDHWRKMRRIMTVPFFTNKVVQQYR 520
G+D+ F YG++WR+ RR+ + + + +R
Sbjct: 453 GRDVAFAPYGEYWRQARRVCVIHLLSPLRILSFR 554
>gb|AV918924.1|AV918924 AV918924 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags22l15 3', mRNA sequence
Length = 566
Score = 46.9 bits (96), Expect(2) = 8e-010
Identities = 15/27 (55%), Positives = 21/27 (77%)
Frame = +2 / -1
Query: 1229 KLGGYDIPAESKILVNAWYLANNPDSW 1309
+LGGYDIPA + ++VNAW + +P SW
Sbjct: 548 RLGGYDIPANTMLMVNAWAIGRDPASW 468
Score = 37.3 bits (75), Expect(2) = 8e-010
Identities = 17/53 (32%), Positives = 20/53 (37%)
Frame = +2 / -1
Query: 1361 VEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQDKVD 1519
V+ NG + LPFG GRR CP L+ F P G D
Sbjct: 422 VDFNGGHYELLPFGAGRRICPGLAMGVANTEFILANLLYCFNWALPQGMRSED 264
>gb|BJ465805.1|BJ465805 BJ465805 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags27g14 3', mRNA sequence
Length = 511
Score = 46.9 bits (96), Expect(2) = 8e-010
Identities = 15/27 (55%), Positives = 21/27 (77%)
Frame = +2 / -1
Query: 1229 KLGGYDIPAESKILVNAWYLANNPDSW 1309
+LGGYDIPA + ++VNAW + +P SW
Sbjct: 505 RLGGYDIPANTMLMVNAWAIGRDPASW 425
Score = 37.3 bits (75), Expect(2) = 8e-010
Identities = 17/53 (32%), Positives = 20/53 (37%)
Frame = +2 / -1
Query: 1361 VEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQDKVD 1519
V+ NG + LPFG GRR CP L+ F P G D
Sbjct: 379 VDFNGGHYELLPFGAGRRICPGLAMGVANTEFILANLLYCFNWALPQGMRSED 221
>gb|CA017939.1|CA017939 HV06O02r HV Hordeum vulgare subsp. vulgare cDNA clone HV06O02
5-PRIME, mRNA sequence
Length = 500
Score = 65.2 bits (136), Expect = 1e-009
Identities = 30/77 (38%), Positives = 41/77 (53%)
Frame = +2 / +2
Query: 293 RMGQRNLVVVSSPPLAREVLHTQGVEFGSRTRNVVFDIFTDKGQDMVFTVYGDHWRKMRR 472
R+G +VVS+P A+ VL T F SR + V I D+VF YG HWR++++
Sbjct: 8 RLGAVPTLVVSTPAAAQAVLRTHDHVFASRPHSPVAHILFYGSADVVFAPYGHHWRQVKK 187
Query: 473 IMTVPFFTNKVVQQYRH 523
I T T + V YRH
Sbjct: 188 ISTTHLLTARKVHSYRH 238
Score = 49.6 bits (102), Expect = 5e-005
Identities = 25/59 (42%), Positives = 33/59 (55%)
Frame = -3 / -2
Query: 496 GEEGHGHDAAHLAPVVAVHGEHHVLPLVREDVEDHVAGAGAELHALRVEHLPRQRRRRD 320
GE+ G + LAPVVAV E V + EDV D G+G E +R +H R+ RRR+
Sbjct: 211 GEQVGGGNLLDLAPVVAVGSEDDVRGTIEEDVGDGGVGSGREHVVVRAQHCLRRSRRRN 35
Score = 34.5 bits (69), Expect = 1.8
Identities = 24/70 (34%), Positives = 32/70 (45%)
Frame = -1 / -3
Query: 522 WRYCCTTLLVKKGTVMMRRILRQWSPYTVNTMSCPLSVKMSKTTLRVREPNSTPCVWSTS 343
WR T L V + V + RQW P T S +M T + N+ CV ST+
Sbjct: 237 WR*EWTFLAVSRWVVEIFLTWRQWWP*GAKTTSAEP*KRMWATGEWGLDANTWSCVRSTA 58
Query: 342 RASGGDETTT 313
A+ G ETT+
Sbjct: 57 CAAAGVETTS 28
>gb|BG344914.2|BG344914 HVSMEg0016N10f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0016N10f, mRNA sequence
Length = 633
Score = 64.8 bits (135), Expect = 1e-009
Identities = 31/81 (38%), Positives = 44/81 (54%)
Frame = +2 / +1
Query: 278 DVFLLRMGQRNLVVVSSPPLAREVLHTQGVEFGSRTRNVVFDIFTDKGQDMVFTVYGDHW 457
D+ LLR+G +VVSSP A VL T SR R++V I ++ F YG HW
Sbjct: 232 DLMLLRLGAVPTLVVSSPRAAEAVLRTHDHVLASRPRSIVPHIIMYGSSNIGFAPYGRHW 411
Query: 458 RKMRRIMTVPFFTNKVVQQYR 520
R+ R+++T + K VQ +R
Sbjct: 412 RQARKLVTTHMLSVKKVQSFR 474
>gb|BQ763851.1|BQ763851 EBro03_SQ005_G18_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ005_G18 5', mRNA sequence
Length = 650
Score = 61.1 bits (127), Expect = 2e-008
Identities = 28/68 (41%), Positives = 38/68 (55%)
Frame = -3 / -1
Query: 493 EEGHGHDAAHLAPVVAVHGEHHVLPLVREDVEDHVAGAGAELHALRVEHLPRQRRRRDHH 314
+E H D AHLAPV+AV E HVL VR+ + A + + +EHL R+RRRR +
Sbjct: 497 DELHDEDLAHLAPVLAVGSERHVLEPVRQPLGPRARRPTAAVGVVHLEHLTRRRRRRHNQ 318
Query: 313 QVALPHPE 290
V P+
Sbjct: 317 HVRRAQPQ 294
Score = 45.5 bits (93), Expect(2) = 1e-009
Identities = 21/49 (42%), Positives = 30/49 (61%)
Frame = +2 / +3
Query: 236 LNHRNLAALSRKFGDVFLLRMGQRNLVVVSSPPLAREVLHTQGVEFGSR 382
L HR+L L+ + G V +LR+G +++VVSS AREVL + SR
Sbjct: 240 LPHRSLRELAHRHGPVMMLRLGATHMLVVSSASAAREVLKVHDADCCSR 386
Score = 37.7 bits (76), Expect(2) = 1e-009
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +2 / +3
Query: 422 QDMVFTVYGDHWRKMRRIMTVPFFTNKVVQ 511
+DM F YG+HWR+MR+I V + + V+
Sbjct: 426 KDMAFAPYGEHWREMRKIFIVELVSMRRVK 515
Score = 34.5 bits (69), Expect = 1.8
Identities = 18/42 (42%), Positives = 22/42 (52%)
Frame = -1 / -2
Query: 369 STPCVWSTSRASGGDETTTRLRCPIRRRKTSPNLRDSAARLR 244
S C STSRA+ D+TT+ P R T P S+ RLR
Sbjct: 373 SASCTLSTSRAADADDTTSMCVAPSRSIITGPCRCASSRRLR 248
>gb|BF621561.1|BF621561 HVSMEa0011G21f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0011G21f, mRNA sequence
Length = 860
Score = 64.3 bits (134), Expect = 2e-009
Identities = 30/80 (37%), Positives = 41/80 (51%)
Frame = +2 / +3
Query: 281 VFLLRMGQRNLVVVSSPPLAREVLHTQGVEFGSRTRNVVFDIFTDKGQDMVFTVYGDHWR 460
+ LLR+G ++V+S AR VL T F SR N DI D+ F YGDHWR
Sbjct: 249 LMLLRLGSVPTLIVTSSNAARAVLRTHDDVFASRPHNPATDIIFYGPSDIAFCPYGDHWR 428
Query: 461 KMRRIMTVPFFTNKVVQQYR 520
++++I T V+ YR
Sbjct: 429 QVKKIAMTHLLTANKVRSYR 488
Score = 49.6 bits (102), Expect(2) = 3e-006
Identities = 29/72 (40%), Positives = 34/72 (47%)
Frame = -3 / -1
Query: 496 GEEGHGHDAAHLAPVVAVHGEHHVLPLVREDVEDHVAGAGAELHALRVEHLPRQRRRRDH 317
GEE D HL PVVAV E V V DV V G +E +R EH PR RR D+
Sbjct: 464 GEEVRHGDLLHLPPVVAVGAEGDVTGAVEYDVGGGVVGPRSEDVIVRAEHRPRGVRRGDN 285
Query: 316 HQVALPHPEEED 281
+ EE +
Sbjct: 284 ERRDRAEAEEHE 249
Score = 34.1 bits (68), Expect = 2.5
Identities = 26/78 (33%), Positives = 36/78 (46%)
Frame = -1 / -2
Query: 522 WRYCCTTLLVKKGTVMMRRILRQWSPYTVNTMSCPLSVKMSKTTLRVREPNSTPCVWSTS 343
WR T L V++ + + QWSP MS MS L RE ++ CV ST+
Sbjct: 490 WR*ERTLLAVRRCVMAIFFTCLQWSP*GQKAMSLGP*NMMSVAGLWGREAKTSSCVRSTA 311
Query: 342 RASGGDETTTRLRCPIRR 289
RA+ + T + P RR
Sbjct: 310 RAAFDEVTMSVGTEPRRR 257
Score = 22.1 bits (42), Expect(2) = 3e-006
Identities = 16/42 (38%), Positives = 19/42 (45%)
Frame = -3 / -1
Query: 289 EEDVAELAGQRGEVAVVEVVADLQPVPEDGHGDGAGRQPELA 164
EE A A GEVA +V V HG A R+ +LA
Sbjct: 260 EEHEAVAAVLGGEVAKGDVWLGANHVQVADHGKPAARRWQLA 135
>gb|BF623074.2|BF623074 HVSMEa0014B04f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0014B04f, mRNA sequence
Length = 820
Score = 64.3 bits (134), Expect = 2e-009
Identities = 31/81 (38%), Positives = 41/81 (50%)
Frame = +2 / +2
Query: 242 HRNLAALSRKFGDVFLLRMGQRNLVVVSSPPLAREVLHTQGVEFGSRTRNVVFDIFTDKG 421
H L L+ + G VF LR+G R VVVSS ARE V F +R R + + G
Sbjct: 212 HAALGRLAARLGPVFSLRLGSRRAVVVSSAECARECFTEHDVTFANRPRFPSQLLVSFNG 391
Query: 422 QDMVFTVYGDHWRKMRRIMTV 484
+ + YG HWR +RR+ V
Sbjct: 392 AALATSSYGPHWRNLRRVAAV 454
Score = 36.3 bits (73), Expect = 0.51
Identities = 25/70 (35%), Positives = 28/70 (40%)
Frame = -1 / -2
Query: 483 TVMMRRILRQWSPYTVNTMSCPLSVKMSKTTLRVREPNSTPCVWSTSRASGGDETTTRLR 304
T RR LRQ P + PL S R R T C S A ++TTT R
Sbjct: 453 TAATRRRLRQCGP*LDVASAAPLKDTSSCDGNRGRLAKVTSCSVKHSLAHSAEDTTTARR 274
Query: 303 CPIRRRKTSP 274
P R KT P
Sbjct: 273 EPRRSEKTGP 244
>gb|BG299547.1|BG299547 HVSMEa0020L03f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0020L03f, mRNA sequence
Length = 811
Score = 64.3 bits (134), Expect = 2e-009
Identities = 31/81 (38%), Positives = 41/81 (50%)
Frame = +2 / +1
Query: 242 HRNLAALSRKFGDVFLLRMGQRNLVVVSSPPLAREVLHTQGVEFGSRTRNVVFDIFTDKG 421
H L L+ + G VF LR+G R VVVSS ARE V F +R R + + G
Sbjct: 208 HAALGRLAARLGPVFSLRLGSRRAVVVSSAECARECFTEHDVTFANRPRFPSQLLVSFNG 387
Query: 422 QDMVFTVYGDHWRKMRRIMTV 484
+ + YG HWR +RR+ V
Sbjct: 388 AALATSSYGPHWRNLRRVAAV 450
Score = 36.3 bits (73), Expect = 0.51
Identities = 25/70 (35%), Positives = 28/70 (40%)
Frame = -1 / -3
Query: 483 TVMMRRILRQWSPYTVNTMSCPLSVKMSKTTLRVREPNSTPCVWSTSRASGGDETTTRLR 304
T RR LRQ P + PL S R R T C S A ++TTT R
Sbjct: 449 TAATRRRLRQCGP*LDVASAAPLKDTSSCDGNRGRLAKVTSCSVKHSLAHSAEDTTTARR 270
Query: 303 CPIRRRKTSP 274
P R KT P
Sbjct: 269 EPRRSEKTGP 240
>gb|BG299744.1|BG299744 HVSMEa0021K06f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0021K06f, mRNA sequence
Length = 785
Score = 64.3 bits (134), Expect = 2e-009
Identities = 31/81 (38%), Positives = 44/81 (54%)
Frame = +2 / +1
Query: 278 DVFLLRMGQRNLVVVSSPPLAREVLHTQGVEFGSRTRNVVFDIFTDKGQDMVFTVYGDHW 457
DV LLR+G VVSS A VL T SR R++V DI D+ F YG++W
Sbjct: 208 DVILLRLGVVPTFVVSSARAAEAVLRTHDHVMASRPRSLVNDIIMYGASDVAFAPYGEYW 387
Query: 458 RKMRRIMTVPFFTNKVVQQYR 520
R+ R++ T ++ + VQ +R
Sbjct: 388 RQARKLATTHMWSAEKVQTFR 450
Score = 41.8 bits (85), Expect = 0.011
Identities = 28/81 (34%), Positives = 36/81 (44%)
Frame = -1 / -1
Query: 519 RYCCTTLLVKKGTVMMRRILRQWSPYTVNTMSCPLSVKMSKTTLRVREPNSTPCVWSTSR 340
R CT + V RQ+SPY S + MS T R R+ + CV ST+
Sbjct: 449 RKVCTFSALHMWVVASFLACRQYSPYGAKATSDAPYMMMSLTRERGRDAMT*SCVRSTAS 270
Query: 339 ASGGDETTTRLRCPIRRRKTS 277
A+ D+TT P RR TS
Sbjct: 269 AARADDTTNVGTTPRRRSITS 207
>gb|BF618151.2|BF618151 HVSMEc0004L02f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0004L02f, mRNA sequence
Length = 562
Score = 64.3 bits (134), Expect = 2e-009
Identities = 31/81 (38%), Positives = 41/81 (50%)
Frame = +2 / +1
Query: 242 HRNLAALSRKFGDVFLLRMGQRNLVVVSSPPLAREVLHTQGVEFGSRTRNVVFDIFTDKG 421
H L L+ + G VF LR+G R VVVSS ARE V F +R R + + G
Sbjct: 217 HAALGRLAARLGPVFSLRLGSRRAVVVSSAECARECFTEHDVTFANRPRFPSQLLVSFNG 396
Query: 422 QDMVFTVYGDHWRKMRRIMTV 484
+ + YG HWR +RR+ V
Sbjct: 397 AALATSSYGPHWRNLRRVAAV 459
Score = 36.3 bits (73), Expect = 0.51
Identities = 25/70 (35%), Positives = 28/70 (40%)
Frame = -1 / -3
Query: 483 TVMMRRILRQWSPYTVNTMSCPLSVKMSKTTLRVREPNSTPCVWSTSRASGGDETTTRLR 304
T RR LRQ P + PL S R R T C S A ++TTT R
Sbjct: 458 TAATRRRLRQCGP*LDVASAAPLKDTSSCDGNRGRLAKVTSCSVKHSLAHSAEDTTTARR 279
Query: 303 CPIRRRKTSP 274
P R KT P
Sbjct: 278 EPRRSEKTGP 249
>gb|AV923778.1|AV923778 AV923778 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd1h15 5', mRNA sequence
Length = 566
Score = 64.3 bits (134), Expect = 2e-009
Identities = 30/80 (37%), Positives = 41/80 (51%)
Frame = +2 / +1
Query: 281 VFLLRMGQRNLVVVSSPPLAREVLHTQGVEFGSRTRNVVFDIFTDKGQDMVFTVYGDHWR 460
+ LLR+G ++V+S AR VL T F SR N DI D+ F YGDHWR
Sbjct: 265 LMLLRLGSVPTLIVTSSNAARAVLRTHDDVFASRPHNPATDIIFYGPSDIAFCPYGDHWR 444
Query: 461 KMRRIMTVPFFTNKVVQQYR 520
++++I T V+ YR
Sbjct: 445 QVKKIAMTHLLTANKVRSYR 504
Score = 49.6 bits (102), Expect = 5e-005
Identities = 29/72 (40%), Positives = 34/72 (47%)
Frame = -3 / -3
Query: 496 GEEGHGHDAAHLAPVVAVHGEHHVLPLVREDVEDHVAGAGAELHALRVEHLPRQRRRRDH 317
GEE D HL PVVAV E V V DV V G +E +R EH PR RR D+
Sbjct: 480 GEEVRHGDLLHLPPVVAVGAEGDVTGAVEYDVGGGVVGPRSEDVIVRAEHRPRGVRRGDN 301
Query: 316 HQVALPHPEEED 281
+ EE +
Sbjct: 300 ERRDRAEAEEHE 265
Score = 34.1 bits (68), Expect = 2.5
Identities = 26/78 (33%), Positives = 36/78 (46%)
Frame = -1 / -1
Query: 522 WRYCCTTLLVKKGTVMMRRILRQWSPYTVNTMSCPLSVKMSKTTLRVREPNSTPCVWSTS 343
WR T L V++ + + QWSP MS MS L RE ++ CV ST+
Sbjct: 506 WR*ERTLLAVRRCVMAIFFTCLQWSP*GQKAMSLGP*NMMSVAGLWGREAKTSSCVRSTA 327
Query: 342 RASGGDETTTRLRCPIRR 289
RA+ + T + P RR
Sbjct: 326 RAAFDEVTMSVGTEPRRR 273
>gb|CA019109.1|CA019109 HV10M21r HV Hordeum vulgare subsp. vulgare cDNA clone HV10M21
5-PRIME, mRNA sequence
Length = 610
Score = 64.3 bits (134), Expect = 2e-009
Identities = 30/80 (37%), Positives = 41/80 (51%)
Frame = +2 / +3
Query: 281 VFLLRMGQRNLVVVSSPPLAREVLHTQGVEFGSRTRNVVFDIFTDKGQDMVFTVYGDHWR 460
+ LLR+G ++V+S AR VL T F SR N DI D+ F YGDHWR
Sbjct: 273 LMLLRLGSVPTLIVTSSNAARAVLRTHDDVFASRPHNPATDIIFYGPSDIAFCPYGDHWR 452
Query: 461 KMRRIMTVPFFTNKVVQQYR 520
++++I T V+ YR
Sbjct: 453 QVKKIAMTHLLTANKVRSYR 512
Score = 49.6 bits (102), Expect = 5e-005
Identities = 29/72 (40%), Positives = 34/72 (47%)
Frame = -3 / -3
Query: 496 GEEGHGHDAAHLAPVVAVHGEHHVLPLVREDVEDHVAGAGAELHALRVEHLPRQRRRRDH 317
GEE D HL PVVAV E V V DV V G +E +R EH PR RR D+
Sbjct: 488 GEEVRHGDLLHLPPVVAVGAEGDVTGAVEYDVGGGVVGPRSEDVIVRAEHRPRGVRRGDN 309
Query: 316 HQVALPHPEEED 281
+ EE +
Sbjct: 308 ERRDRAEAEEHE 273
Score = 34.1 bits (68), Expect = 2.5
Identities = 26/78 (33%), Positives = 36/78 (46%)
Frame = -1 / -1
Query: 522 WRYCCTTLLVKKGTVMMRRILRQWSPYTVNTMSCPLSVKMSKTTLRVREPNSTPCVWSTS 343
WR T L V++ + + QWSP MS MS L RE ++ CV ST+
Sbjct: 514 WR*ERTLLAVRRCVMAIFFTCLQWSP*GQKAMSLGP*NMMSVAGLWGREAKTSSCVRSTA 335
Query: 342 RASGGDETTTRLRCPIRR 289
RA+ + T + P RR
Sbjct: 334 RAAFDEVTMSVGTEPRRR 281
>gb|BG365432.1|BG365432 HVSMEi0002K17f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0002K17f, mRNA sequence
Length = 772
Score = 51.0 bits (105), Expect(2) = 2e-009
Identities = 20/66 (30%), Positives = 35/66 (53%)
Frame = +2 / +2
Query: 1112 QITEPDTHNLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWYLA 1291
+++E D H +PYL+AV+ E LR ++PH D ++GGY IP + + ++
Sbjct: 14 EVSEEDVHKMPYLKAVVLEGLRKHPPAHFVLPHKAAEDMEVGGYLIPKGATVNFMVAEMS 193
Query: 1292 NNPDSW 1309
+ W
Sbjct: 194 RDEREW 211
Score = 31.8 bits (63), Expect(2) = 2e-009
Identities = 12/44 (27%), Positives = 20/44 (45%)
Frame = +2 / +2
Query: 1379 DFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQD 1510
+ + +PFGVGR+ C +V+ FE PG++
Sbjct: 290 EIKMMPFGVGRKICAGLGIAMLHLEYFVANMVREFEWQEVPGEE 421
Score = 29.9 bits (59), Expect(2) = 6.7
Identities = 17/44 (38%), Positives = 18/44 (40%)
Frame = -1 / -2
Query: 1509 SCPGGGSSSKFWTRRPMVMPRMGRARMIPGQLLRPTPKGRYLKS 1378
S PG S T R A P Q+LRPTP G L S
Sbjct: 420 SSPGTSCHSNSLTMLATKYSRWSMAMPSPAQILRPTPNGIILIS 289
Score = 23.5 bits (45), Expect(2) = 6.7
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = -1 / -2
Query: 1251 GMSXPPSLASWRFMCGTSSGMAIRSRSVSLITACR*GRLCVSGS 1120
G+ PP+ S +CG++ R S TA R G L S S
Sbjct: 153 GIRYPPTSMSSAALCGSTKCAGGCFRRPSRTTAFRYGILWTSSS 22
>gb|AU252316.1|AU252316 AU252316 salt-stressed barley root cDNA Hordeum vulgare subsp.
vulgare cDNA clone BR-C09 similar to putative cytochrome
P450, mRNA sequence
Length = 1066
Score = 46.0 bits (94), Expect(2) = 2e-009
Identities = 17/46 (36%), Positives = 27/46 (58%)
Frame = +2 / +3
Query: 950 INEDNVLFIVENINVAAIETTLWSIEWAVAELVNHPEIQQKLRQEL 1087
+ + + + + VA +TT EW +AELVNHP++Q KL E+
Sbjct: 285 LTDAEITTLTAEVMVAGTDTTATLFEWIMAELVNHPDVQAKLYDEV 422
Score = 40.9 bits (83), Expect(2) = 2e-009
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = +2 / +3
Query: 1379 DFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQDKVDTTE 1528
+ + +PFG GRR CP L++ F+ LP KVD TE
Sbjct: 711 EVKMMPFGAGRRLCPGYSLATLHLEYFVGTLIKEFQWLPAVQGQKVDMTE 860
Score = 36.8 bits (74), Expect(3) = 9e-005
Identities = 16/29 (55%), Positives = 19/29 (65%)
Frame = -1 / -1
Query: 1074 SFCWISGWFTSSATAHSIDHSVVSIAATL 988
S SGWFTSSA HS +VVS+ AT+
Sbjct: 409 SLACTSGWFTSSAMIHSNKVAVVSVPATM 323
Score = 29.0 bits (57), Expect(3) = 9e-005
Identities = 20/51 (39%), Positives = 22/51 (43%)
Frame = -1 / -1
Query: 1527 SVVSTLSCPGGGSSSKFWTRRPMVMPRMGRARMIPGQLLRPTPKGRYLKSL 1375
SV+ST GS R P + AR PG RP PKG L SL
Sbjct: 859 SVMSTFCP*TAGSHWNSLMRVPTKYSKCRVARE*PGHNRRPAPKGIILTSL 707
Score = 24.4 bits (47), Expect(3) = 9e-005
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -1 / -1
Query: 138 ATMTDAKRPTRSFSTKRRTMATGRR 64
ATMT A S S K R+ ++GRR
Sbjct: 331 ATMTSAVSVVISASVKARSPSSGRR 257
>gb|CA018612.1|CA018612 HV09C09r HV Hordeum vulgare subsp. vulgare cDNA clone HV09C09
5-PRIME, mRNA sequence
Length = 653
Score = 45.1 bits (92), Expect(2) = 2e-009
Identities = 17/38 (44%), Positives = 24/38 (63%)
Frame = +2 / +2
Query: 974 IVENINVAAIETTLWSIEWAVAELVNHPEIQQKLRQEL 1087
+ + VA +TT EW +AELVNHP++Q KL E+
Sbjct: 14 LTAEVMVAGTDTTATLFEWIMAELVNHPDVQAKLYDEV 127
Score = 40.9 bits (83), Expect(2) = 2e-009
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = +2 / +2
Query: 1379 DFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQDKVDTTE 1528
+ + +PFG GRR CP L++ F+ LP KVD TE
Sbjct: 416 EVKMMPFGAGRRLCPGYSLATLHLEYFVGTLIKEFQWLPAVQGQKVDMTE 565
Score = 36.8 bits (74), Expect(2) = 0.002
Identities = 16/29 (55%), Positives = 19/29 (65%)
Frame = -1 / -3
Query: 1074 SFCWISGWFTSSATAHSIDHSVVSIAATL 988
S SGWFTSSA HS +VVS+ AT+
Sbjct: 114 SLACTSGWFTSSAMIHSNKVAVVSVPATM 28
Score = 29.0 bits (57), Expect(2) = 0.002
Identities = 20/51 (39%), Positives = 22/51 (43%)
Frame = -1 / -3
Query: 1527 SVVSTLSCPGGGSSSKFWTRRPMVMPRMGRARMIPGQLLRPTPKGRYLKSL 1375
SV+ST GS R P + AR PG RP PKG L SL
Sbjct: 564 SVMSTFCP*TAGSHWNSLMRVPTKYSKCRVARE*PGHNRRPAPKGIILTSL 412
>gb|BF623024.2|BF623024 HVSMEa0012K14f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0012K14f, mRNA sequence
Length = 888
Score = 63.8 bits (133), Expect = 3e-009
Identities = 31/81 (38%), Positives = 41/81 (50%)
Frame = +2 / +1
Query: 242 HRNLAALSRKFGDVFLLRMGQRNLVVVSSPPLAREVLHTQGVEFGSRTRNVVFDIFTDKG 421
H L L+ + G VF LR+G R VVVSS ARE V F +R R + + G
Sbjct: 214 HAALGRLAARLGPVFSLRLGSRRAVVVSSAECARECFTEHDVTFANRPRFPSQLLVSFNG 393
Query: 422 QDMVFTVYGDHWRKMRRIMTV 484
+ + YG HWR +RR+ V
Sbjct: 394 AALATSSYGPHWRNLRRVADV 456
Score = 35.4 bits (71), Expect = 0.97
Identities = 25/70 (35%), Positives = 28/70 (40%)
Frame = -1 / -2
Query: 483 TVMMRRILRQWSPYTVNTMSCPLSVKMSKTTLRVREPNSTPCVWSTSRASGGDETTTRLR 304
T RR LRQ P + PL S R R T C S A ++TTT R
Sbjct: 455 TSATRRRLRQCGP*LDVASAAPLKDTSSCDGNRGRLAKVTSCSVKHSLAHSAEDTTTARR 276
Query: 303 CPIRRRKTSP 274
P R KT P
Sbjct: 275 EPRRSEKTGP 246
>gb|BE193332.3|BE193332 HVSMEh0080J21f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0080J21f, mRNA sequence
Length = 679
Score = 63.8 bits (133), Expect = 3e-009
Identities = 32/94 (34%), Positives = 49/94 (52%)
Frame = +2 / +2
Query: 242 HRNLAALSRKFGDVFLLRMGQRNLVVVSSPPLAREVLHTQGVEFGSRTRNVVFDIFTDKG 421
HR+L L+R V L++G +VVSSP A+EVL T V SR + + T
Sbjct: 203 HRSLQRLARSLCPVVHLQLGGVAAIVVSSPEAAKEVLKTHDVHCCSRPSSPGAKLITYGN 382
Query: 422 QDMVFTVYGDHWRKMRRIMTVPFFTNKVVQQYRH 523
QD+ F+ Y WR+ R++ ++K VQ + +
Sbjct: 383 QDIAFSPYNASWRERRKLFVSDLVSSKRVQSFAY 484
Score = 37.3 bits (75), Expect = 0.27
Identities = 19/42 (45%), Positives = 21/42 (50%)
Frame = -1 / -2
Query: 366 TPCVWSTSRASGGDETTTRLRCPIRRRKTSPNLRDSAARLRW 241
T CV STS A+ GD+TT P R T LR S RW
Sbjct: 327 TSCVLSTSLAASGDDTTMAATPPSCRWTTGHRLRASLCSDRW 202
Score = 36.3 bits (73), Expect = 0.51
Identities = 24/70 (34%), Positives = 31/70 (44%)
Frame = -3 / -1
Query: 469 AHLAPVVAVHGEHHVLPLVREDVEDHVAGAGAELHALRVEHLPRQRRRRDHHQVALPHPE 290
A LAP V E VL V + G+ A + +R+EHL RRR H +
Sbjct: 430 APLAPACVVRRERDVLVAVGDQFCTW*RGSAAAMDIMRLEHLLGSLRRRHHDGRDAAKLQ 251
Query: 289 EEDVAELAGQ 260
+D A AGQ
Sbjct: 250 VDDGA*AAGQ 221
Database: Hordeum_nucl_with_EST.fasta
Posted date: May 2, 2006 2:38 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 577,807,315
Number of Sequences: 312970
Number of extensions: 8826687
Number of successful extensions: 107893
Number of sequences better than 10.0: 1049
length of database: 58,378,179
effective HSP length: 54
effective length of database: 41,477,799
effective search space used: 22522444857
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)