TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 8010462.2.1
(638 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AL501962.1|AL501962 AL501962 Hordeum vulgare Barke roots... 85 2e-030
gb|BQ767013.1|BQ767013 EBro08_SQ007_A24_R root, 3 week, dro... 83 2e-029
gb|BQ760542.1|BQ760542 EBro03_SQ001_F05_R root, 3 week, wat... 85 2e-029
gb|AJ462386.1|AJ462386 AJ462386 S00002 Hordeum vulgare subs... 85 3e-029
gb|BG310118.1|BG310118 HVSMEc0016N14f Hordeum vulgare seedl... 85 4e-029
gb|CB882049.1|CB882049 HM11L11w HM Hordeum vulgare subsp. v... 85 4e-029
gb|AV918830.1|AV918830 AV918830 K. Sato unpublished cDNA li... 85 4e-029
gb|BU989823.1|BU989823 HF22M18r HF Hordeum vulgare subsp. v... 85 4e-029
gb|BU990169.1|BU990169 HF24E14r HF Hordeum vulgare subsp. v... 85 4e-029
gb|BU990224.1|BU990224 HF24H03r HF Hordeum vulgare subsp. v... 85 4e-029
gb|BF258018.2|BF258018 HVSMEf0014I06f Hordeum vulgare seedl... 85 4e-029
gb|CB858981.1|CB858981 HI08O15w HI Hordeum vulgare subsp. v... 85 4e-029
gb|BQ662656.1|BQ662656 HS03H24u HS Hordeum vulgare subsp. v... 85 4e-029
gb|BQ768383.1|BQ768383 EBro08_SQ011_F13_R root, 3 week, dro... 85 4e-029
gb|AL503163.1|AL503163 AL503163 Hordeum vulgare Barke roots... 85 4e-029
gb|BQ756566.1|BQ756566 EBem09_SQ003_B12_R embryo, 1 Day ger... 85 4e-029
gb|AL500991.1|AL500991 AL500991 Hordeum vulgare Barke roots... 85 4e-029
gb|BI955715.1|BI955715 HVSMEm0024C22f Hordeum vulgare green... 80 2e-027
gb|BI777236.2|BI777236 EBro03_SQ002_I15_R root, 3 week, wat... 85 3e-025
gb|CB881918.1|CB881918 HM11E17w HM Hordeum vulgare subsp. v... 85 8e-025
emb|Z49145.1|HVPAL2MR H.vulgare partial PAL mRNA for phenyl... 79 5e-023
gb|AV919053.1|AV919053 AV919053 K. Sato unpublished cDNA li... 79 5e-023
gb|BQ768801.1|BQ768801 EBro08_SQ012_P15_R root, 3 week, dro... 79 5e-023
gb|AL502364.1|AL502364 AL502364 Hordeum vulgare Barke roots... 79 5e-023
gb|AV919026.1|AV919026 AV919026 K. Sato unpublished cDNA li... 79 5e-023
gb|AV928876.1|AV928876 AV928876 K. Sato unpublished cDNA li... 79 5e-023
gb|AL501352.1|AL501352 AL501352 Hordeum vulgare Barke roots... 79 5e-023
gb|BM370557.2|BM370557 EBro08_SQ004_J10_R root, 3 week, dro... 79 5e-023
gb|BQ468898.1|BQ468898 HM02L09r HM Hordeum vulgare subsp. v... 79 5e-023
gb|BJ466939.1|BJ466939 BJ466939 K. Sato unpublished cDNA li... 79 5e-023
gb|AV921618.1|AV921618 AV921618 K. Sato unpublished cDNA li... 79 5e-023
gb|AV928881.1|AV928881 AV928881 K. Sato unpublished cDNA li... 79 5e-023
gb|BQ767217.1|BQ767217 EBro08_SQ008_E10_R root, 3 week, dro... 79 5e-023
gb|BQ765396.1|BQ765396 EBro03_SQ007_E05_R root, 3 week, wat... 79 5e-023
gb|BU968202.1|BU968202 HB06L24r BC Hordeum vulgare subsp. v... 79 5e-023
gb|BI778700.2|BI778700 EBro01_SQ001_C06_R root, 3 week, hyd... 85 6e-023
gb|BQ762717.1|BQ762717 EBro02_SQ004_I20_R root, 3 week, hyd... 79 7e-022
gb|BF264601.3|BF264601 HV_CEa0009N21f Hordeum vulgare seedl... 79 8e-022
gb|BQ765219.1|BQ765219 EBro03_SQ006_F15_R root, 3 week, wat... 79 8e-022
gb|BJ459164.1|BJ459164 BJ459164 K. Sato unpublished cDNA li... 79 8e-022
gb|AV918666.1|AV918666 AV918666 K. Sato unpublished cDNA li... 79 8e-022
gb|BQ765192.1|BQ765192 EBro03_SQ006_A15_R root, 3 week, wat... 79 8e-022
gb|BE437808.1|BE437808 SFR007.G02F990625 ITEC SFR Barley Le... 79 8e-022
gb|BE438184.1|BE438184 SFR010.H12F990722 ITEC SFR Barley Le... 79 8e-022
gb|BE437962.1|BE437962 SFR009.D04F990512 ITEC SFR Barley Le... 79 8e-022
gb|BQ661267.1|BQ661267 HM02L09u HM Hordeum vulgare subsp. v... 75 8e-022
gb|BJ468382.1|BJ468382 BJ468382 K. Sato unpublished cDNA li... 79 1e-021
gb|AV921319.1|AV921319 AV921319 K. Sato unpublished cDNA li... 79 1e-021
gb|BI947758.1|BI947758 HVSMEl0006M12f Hordeum vulgare spike... 79 1e-021
gb|CA016735.1|CA016735 HV06I16u HV Hordeum vulgare subsp. v... 74 1e-021
gb|BJ467713.1|BJ467713 BJ467713 K. Sato unpublished cDNA li... 85 7e-021
>gb|AL501962.1|AL501962 AL501962 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW06A07u 3', mRNA sequence
Length = 344
Score = 85.4 bits (180), Expect(4) = 2e-030
Identities = 32/41 (78%), Positives = 37/41 (90%)
Frame = +1 / -2
Query: 73 VESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
VE+G PL PNRI++CRSYPLY+FVRE GTEYLTGE+TRSP
Sbjct: 274 VENGTPLAPNRIKDCRSYPLYQFVREVCGTEYLTGEKTRSP 152
Score = 64.8 bits (135), Expect(4) = 2e-026
Identities = 31/54 (57%), Positives = 33/54 (61%)
Frame = -1 / +3
Query: 194 GDLVLSPVRYSVPTSSRTNRYSG*DRHSLILLGTRGXPLSTXARXXXXPWAXRA 33
GD V SPVRYSVP +SRTN SG*+R SLI LG G P ST AR A
Sbjct: 153 GDRVFSPVRYSVPHTSRTNW*SG*ERQSLIRLGASGVPFSTDARAASTSLGSAA 314
Score = 56.1 bits (116), Expect(4) = 2e-030
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +1 / -2
Query: 247 IDPLLECLKEWNGAPLPLC*A 309
IDPLLECLKEWNGAPLPLC*A
Sbjct: 103 IDPLLECLKEWNGAPLPLC*A 41
Score = 55.6 bits (115), Expect(4) = 2e-026
Identities = 24/26 (92%), Positives = 24/26 (92%)
Frame = -1 / +3
Query: 317 LS*AQQSGRGAPFHSLRHSSSGSMVL 240
LS AQQSGRGAPFHSLRHSSSGSM L
Sbjct: 33 LSTAQQSGRGAPFHSLRHSSSGSMCL 110
Score = 26.3 bits (51), Expect(4) = 2e-026
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = -2 / +3
Query: 49 LGXRARTCCSNSATL 5
LG AR CSNSATL
Sbjct: 300 LGSAARMFCSNSATL 344
Score = 24.4 bits (47), Expect(4) = 2e-026
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = -2 / +2
Query: 226 GHEHLVELLAG 194
GH+HLV+LL G
Sbjct: 122 GHQHLVQLLPG 154
Score = 24.0 bits (46), Expect(4) = 2e-030
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +3 / -3
Query: 195 PARSSTRCSWP 227
P RS TRC WP
Sbjct: 153 PGRS*TRCWWP 121
Score = 19.9 bits (37), Expect(4) = 2e-030
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +3 / -2
Query: 6 KVAEFEQQV 32
KVAEFEQ +
Sbjct: 343 KVAEFEQNI 317
>gb|BQ767013.1|BQ767013 EBro08_SQ007_A24_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ007_A24 5', mRNA sequence
Length = 690
Score = 83.1 bits (175), Expect(3) = 2e-029
Identities = 33/41 (80%), Positives = 36/41 (87%)
Frame = +1 / +3
Query: 73 VESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
VESG +PNRI ECRSYPLYRFVREE+GT YLTGE+TRSP
Sbjct: 354 VESGTAEMPNRITECRSYPLYRFVREELGTVYLTGEKTRSP 476
Score = 68.9 bits (144), Expect(3) = 4e-022
Identities = 30/44 (68%), Positives = 34/44 (77%)
Frame = -1 / -3
Query: 194 GDLVLSPVRYSVPTSSRTNRYSG*DRHSLILLGTRGXPLSTXAR 63
GD V SPVRY+VP+SSRTNR G +RHS+ILLG PLST AR
Sbjct: 475 GDRVFSPVRYTVPSSSRTNR*RGYERHSVILLGISAVPLSTAAR 344
Score = 49.6 bits (102), Expect(3) = 2e-029
Identities = 18/22 (81%), Positives = 19/22 (86%)
Frame = +1 / +3
Query: 247 IDPLLECLKEWNGAPLPLC*AQ 312
ID LLECLKEWNG PLP+C* Q
Sbjct: 525 IDALLECLKEWNGEPLPIC*TQ 590
Score = 43.2 bits (88), Expect(3) = 4e-022
Identities = 17/21 (80%), Positives = 18/21 (85%)
Frame = -1 / -3
Query: 302 QSGRGAPFHSLRHSSSGSMVL 240
Q GRG+PFHSLRHSSS SM L
Sbjct: 580 QMGRGSPFHSLRHSSSASMCL 518
Score = 34.1 bits (68), Expect(3) = 2e-029
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = +3 / +1
Query: 195 PARSSTRCSWPINQ 236
PARSSTRCSWP+ +
Sbjct: 475 PARSSTRCSWPLTK 516
Score = 29.5 bits (58), Expect(3) = 4e-022
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = -2 / -2
Query: 226 GHEHLVELLAG 194
GHEHLVELLAG
Sbjct: 506 GHEHLVELLAG 474
>gb|BQ760542.1|BQ760542 EBro03_SQ001_F05_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ001_F05 5', mRNA sequence
Length = 321
Score = 85.4 bits (180), Expect(3) = 2e-029
Identities = 32/41 (78%), Positives = 37/41 (90%)
Frame = +1 / +2
Query: 73 VESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
VE+G PL PNRI++CRSYPLY+FVRE GTEYLTGE+TRSP
Sbjct: 53 VENGTPLAPNRIKDCRSYPLYQFVREVCGTEYLTGEKTRSP 175
Score = 64.8 bits (135), Expect(3) = 2e-023
Identities = 31/54 (57%), Positives = 33/54 (61%)
Frame = -1 / -1
Query: 194 GDLVLSPVRYSVPTSSRTNRYSG*DRHSLILLGTRGXPLSTXARXXXXPWAXRA 33
GD V SPVRYSVP +SRTN SG*+R SLI LG G P ST AR A
Sbjct: 174 GDRVFSPVRYSVPHTSRTNW*SG*ERQSLIRLGASGVPFSTDARAASTSLGSAA 13
Score = 56.1 bits (116), Expect(3) = 2e-029
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +1 / +2
Query: 247 IDPLLECLKEWNGAPLPLC*A 309
IDPLLECLKEWNGAPLPLC*A
Sbjct: 224 IDPLLECLKEWNGAPLPLC*A 286
Score = 55.6 bits (115), Expect(3) = 2e-023
Identities = 24/26 (92%), Positives = 24/26 (92%)
Frame = -1 / -1
Query: 317 LS*AQQSGRGAPFHSLRHSSSGSMVL 240
LS AQQSGRGAPFHSLRHSSSGSM L
Sbjct: 294 LSTAQQSGRGAPFHSLRHSSSGSMCL 217
Score = 24.4 bits (47), Expect(3) = 2e-023
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = -2 / -3
Query: 226 GHEHLVELLAG 194
GH+HLV+LL G
Sbjct: 205 GHQHLVQLLPG 173
Score = 24.0 bits (46), Expect(3) = 2e-029
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +3 / +3
Query: 195 PARSSTRCSWP 227
P RS TRC WP
Sbjct: 174 PGRS*TRCWWP 206
>gb|AJ462386.1|AJ462386 AJ462386 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200074D09F1, mRNA sequence
Length = 360
Score = 85.4 bits (180), Expect(3) = 3e-029
Identities = 32/41 (78%), Positives = 37/41 (90%)
Frame = +1 / +2
Query: 73 VESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
VE+G PL PNRI++CRSYPLY+FVRE GTEYLTGE+TRSP
Sbjct: 23 VENGTPLAPNRIKDCRSYPLYQFVREVCGTEYLTGEKTRSP 145
Score = 64.3 bits (134), Expect(3) = 4e-023
Identities = 30/44 (68%), Positives = 32/44 (72%)
Frame = -1 / -1
Query: 194 GDLVLSPVRYSVPTSSRTNRYSG*DRHSLILLGTRGXPLSTXAR 63
GD V SPVRYSVP +SRTN SG*+R SLI LG G P ST AR
Sbjct: 144 GDRVFSPVRYSVPHTSRTNW*SG*ERQSLIRLGASGVPFSTDAR 13
Score = 56.1 bits (116), Expect(3) = 3e-029
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +1 / +2
Query: 247 IDPLLECLKEWNGAPLPLC*A 309
IDPLLECLKEWNGAPLPLC*A
Sbjct: 194 IDPLLECLKEWNGAPLPLC*A 256
Score = 55.6 bits (115), Expect(3) = 4e-023
Identities = 24/26 (92%), Positives = 24/26 (92%)
Frame = -1 / -1
Query: 317 LS*AQQSGRGAPFHSLRHSSSGSMVL 240
LS AQQSGRGAPFHSLRHSSSGSM L
Sbjct: 264 LSTAQQSGRGAPFHSLRHSSSGSMCL 187
Score = 24.4 bits (47), Expect(3) = 4e-023
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = -2 / -3
Query: 226 GHEHLVELLAG 194
GH+HLV+LL G
Sbjct: 175 GHQHLVQLLPG 143
Score = 24.0 bits (46), Expect(3) = 3e-029
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +3 / +3
Query: 195 PARSSTRCSWP 227
P RS TRC WP
Sbjct: 144 PGRS*TRCWWP 176
>gb|BG310118.1|BG310118 HVSMEc0016N14f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0016N14f, mRNA sequence
Length = 809
Score = 85.4 bits (180), Expect(3) = 4e-029
Identities = 32/41 (78%), Positives = 37/41 (90%)
Frame = +1 / +1
Query: 73 VESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
VE+G PL PNRI++CRSYPLY+FVRE GTEYLTGE+TRSP
Sbjct: 286 VENGTPLAPNRIKDCRSYPLYQFVREVCGTEYLTGEKTRSP 408
Score = 64.8 bits (135), Expect(4) = 1e-025
Identities = 31/54 (57%), Positives = 33/54 (61%)
Frame = -1 / -1
Query: 194 GDLVLSPVRYSVPTSSRTNRYSG*DRHSLILLGTRGXPLSTXARXXXXPWAXRA 33
GD V SPVRYSVP +SRTN SG*+R SLI LG G P ST AR A
Sbjct: 407 GDRVFSPVRYSVPHTSRTNW*SG*ERQSLIRLGASGVPFSTDARAASTSLGSAA 246
Score = 56.1 bits (116), Expect(3) = 4e-029
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +1 / +1
Query: 247 IDPLLECLKEWNGAPLPLC*A 309
IDPLLECLKEWNGAPLPLC*A
Sbjct: 457 IDPLLECLKEWNGAPLPLC*A 519
Score = 55.6 bits (115), Expect(4) = 1e-025
Identities = 24/26 (92%), Positives = 24/26 (92%)
Frame = -1 / -1
Query: 317 LS*AQQSGRGAPFHSLRHSSSGSMVL 240
LS AQQSGRGAPFHSLRHSSSGSM L
Sbjct: 527 LSTAQQSGRGAPFHSLRHSSSGSMCL 450
Score = 26.3 bits (51), Expect(4) = 1e-025
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = -2 / -1
Query: 49 LGXRARTCCSNSATL 5
LG AR CSNSATL
Sbjct: 260 LGSAARMFCSNSATL 216
Score = 24.4 bits (47), Expect(4) = 1e-025
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = -2 / -3
Query: 226 GHEHLVELLAG 194
GH+HLV+LL G
Sbjct: 438 GHQHLVQLLPG 406
Score = 24.0 bits (46), Expect(3) = 4e-029
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +3 / +2
Query: 195 PARSSTRCSWP 227
P RS TRC WP
Sbjct: 407 PGRS*TRCWWP 439
>gb|CB882049.1|CB882049 HM11L11w HM Hordeum vulgare subsp. vulgare cDNA clone HM11L11
3-PRIME, mRNA sequence
Length = 658
Score = 85.4 bits (180), Expect(3) = 4e-029
Identities = 32/41 (78%), Positives = 37/41 (90%)
Frame = +1 / -3
Query: 73 VESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
VE+G PL PNRI++CRSYPLY+FVRE GTEYLTGE+TRSP
Sbjct: 314 VENGTPLAPNRIKDCRSYPLYQFVREVCGTEYLTGEKTRSP 192
Score = 64.8 bits (135), Expect(4) = 1e-025
Identities = 31/54 (57%), Positives = 33/54 (61%)
Frame = -1 / +1
Query: 194 GDLVLSPVRYSVPTSSRTNRYSG*DRHSLILLGTRGXPLSTXARXXXXPWAXRA 33
GD V SPVRYSVP +SRTN SG*+R SLI LG G P ST AR A
Sbjct: 193 GDRVFSPVRYSVPHTSRTNW*SG*ERQSLIRLGASGVPFSTDARAASTSLGSAA 354
Score = 56.1 bits (116), Expect(3) = 4e-029
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +1 / -3
Query: 247 IDPLLECLKEWNGAPLPLC*A 309
IDPLLECLKEWNGAPLPLC*A
Sbjct: 143 IDPLLECLKEWNGAPLPLC*A 81
Score = 55.6 bits (115), Expect(4) = 1e-025
Identities = 24/26 (92%), Positives = 24/26 (92%)
Frame = -1 / +1
Query: 317 LS*AQQSGRGAPFHSLRHSSSGSMVL 240
LS AQQSGRGAPFHSLRHSSSGSM L
Sbjct: 73 LSTAQQSGRGAPFHSLRHSSSGSMCL 150
Score = 26.3 bits (51), Expect(4) = 1e-025
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = -2 / +1
Query: 49 LGXRARTCCSNSATL 5
LG AR CSNSATL
Sbjct: 340 LGSAARMFCSNSATL 384
Score = 24.4 bits (47), Expect(4) = 1e-025
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = -2 / +3
Query: 226 GHEHLVELLAG 194
GH+HLV+LL G
Sbjct: 162 GHQHLVQLLPG 194
Score = 24.0 bits (46), Expect(3) = 4e-029
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +3 / -1
Query: 195 PARSSTRCSWP 227
P RS TRC WP
Sbjct: 193 PGRS*TRCWWP 161
>gb|AV918830.1|AV918830 AV918830 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags22g18 3', mRNA sequence
Length = 605
Score = 85.4 bits (180), Expect(3) = 4e-029
Identities = 32/41 (78%), Positives = 37/41 (90%)
Frame = +1 / -1
Query: 73 VESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
VE+G PL PNRI++CRSYPLY+FVRE GTEYLTGE+TRSP
Sbjct: 431 VENGTPLAPNRIKDCRSYPLYQFVREVCGTEYLTGEKTRSP 309
Score = 64.8 bits (135), Expect(4) = 1e-025
Identities = 31/54 (57%), Positives = 33/54 (61%)
Frame = -1 / +1
Query: 194 GDLVLSPVRYSVPTSSRTNRYSG*DRHSLILLGTRGXPLSTXARXXXXPWAXRA 33
GD V SPVRYSVP +SRTN SG*+R SLI LG G P ST AR A
Sbjct: 310 GDRVFSPVRYSVPHTSRTNW*SG*ERQSLIRLGASGVPFSTDARAASTSLGSAA 471
Score = 56.1 bits (116), Expect(3) = 4e-029
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +1 / -1
Query: 247 IDPLLECLKEWNGAPLPLC*A 309
IDPLLECLKEWNGAPLPLC*A
Sbjct: 260 IDPLLECLKEWNGAPLPLC*A 198
Score = 55.6 bits (115), Expect(4) = 1e-025
Identities = 24/26 (92%), Positives = 24/26 (92%)
Frame = -1 / +1
Query: 317 LS*AQQSGRGAPFHSLRHSSSGSMVL 240
LS AQQSGRGAPFHSLRHSSSGSM L
Sbjct: 190 LSTAQQSGRGAPFHSLRHSSSGSMCL 267
Score = 26.3 bits (51), Expect(4) = 1e-025
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = -2 / +1
Query: 49 LGXRARTCCSNSATL 5
LG AR CSNSATL
Sbjct: 457 LGSAARMFCSNSATL 501
Score = 24.4 bits (47), Expect(4) = 1e-025
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = -2 / +3
Query: 226 GHEHLVELLAG 194
GH+HLV+LL G
Sbjct: 279 GHQHLVQLLPG 311
Score = 24.0 bits (46), Expect(3) = 4e-029
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +3 / -2
Query: 195 PARSSTRCSWP 227
P RS TRC WP
Sbjct: 310 PGRS*TRCWWP 278
>gb|BU989823.1|BU989823 HF22M18r HF Hordeum vulgare subsp. vulgare cDNA clone HF22M18
5-PRIME, mRNA sequence
Length = 592
Score = 85.4 bits (180), Expect(3) = 4e-029
Identities = 32/41 (78%), Positives = 37/41 (90%)
Frame = +1 / +1
Query: 73 VESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
VE+G PL PNRI++CRSYPLY+FVRE GTEYLTGE+TRSP
Sbjct: 337 VENGTPLAPNRIKDCRSYPLYQFVREVCGTEYLTGEKTRSP 459
Score = 64.8 bits (135), Expect(4) = 1e-025
Identities = 31/54 (57%), Positives = 33/54 (61%)
Frame = -1 / -3
Query: 194 GDLVLSPVRYSVPTSSRTNRYSG*DRHSLILLGTRGXPLSTXARXXXXPWAXRA 33
GD V SPVRYSVP +SRTN SG*+R SLI LG G P ST AR A
Sbjct: 458 GDRVFSPVRYSVPHTSRTNW*SG*ERQSLIRLGASGVPFSTDARAASTSLGSAA 297
Score = 56.1 bits (116), Expect(3) = 4e-029
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +1 / +1
Query: 247 IDPLLECLKEWNGAPLPLC*A 309
IDPLLECLKEWNGAPLPLC*A
Sbjct: 508 IDPLLECLKEWNGAPLPLC*A 570
Score = 55.6 bits (115), Expect(4) = 1e-025
Identities = 24/26 (92%), Positives = 24/26 (92%)
Frame = -1 / -3
Query: 317 LS*AQQSGRGAPFHSLRHSSSGSMVL 240
LS AQQSGRGAPFHSLRHSSSGSM L
Sbjct: 578 LSTAQQSGRGAPFHSLRHSSSGSMCL 501
Score = 26.3 bits (51), Expect(4) = 1e-025
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = -2 / -3
Query: 49 LGXRARTCCSNSATL 5
LG AR CSNSATL
Sbjct: 311 LGSAARMFCSNSATL 267
Score = 24.4 bits (47), Expect(4) = 1e-025
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = -2 / -2
Query: 226 GHEHLVELLAG 194
GH+HLV+LL G
Sbjct: 489 GHQHLVQLLPG 457
Score = 24.0 bits (46), Expect(3) = 4e-029
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +3 / +2
Query: 195 PARSSTRCSWP 227
P RS TRC WP
Sbjct: 458 PGRS*TRCWWP 490
>gb|BU990169.1|BU990169 HF24E14r HF Hordeum vulgare subsp. vulgare cDNA clone HF24E14
5-PRIME, mRNA sequence
Length = 592
Score = 85.4 bits (180), Expect(3) = 4e-029
Identities = 32/41 (78%), Positives = 37/41 (90%)
Frame = +1 / +1
Query: 73 VESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
VE+G PL PNRI++CRSYPLY+FVRE GTEYLTGE+TRSP
Sbjct: 337 VENGTPLAPNRIKDCRSYPLYQFVREVCGTEYLTGEKTRSP 459
Score = 64.8 bits (135), Expect(4) = 1e-025
Identities = 31/54 (57%), Positives = 33/54 (61%)
Frame = -1 / -3
Query: 194 GDLVLSPVRYSVPTSSRTNRYSG*DRHSLILLGTRGXPLSTXARXXXXPWAXRA 33
GD V SPVRYSVP +SRTN SG*+R SLI LG G P ST AR A
Sbjct: 458 GDRVFSPVRYSVPHTSRTNW*SG*ERQSLIRLGASGVPFSTDARAASTSLGSAA 297
Score = 56.1 bits (116), Expect(3) = 4e-029
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +1 / +1
Query: 247 IDPLLECLKEWNGAPLPLC*A 309
IDPLLECLKEWNGAPLPLC*A
Sbjct: 508 IDPLLECLKEWNGAPLPLC*A 570
Score = 55.6 bits (115), Expect(4) = 1e-025
Identities = 24/26 (92%), Positives = 24/26 (92%)
Frame = -1 / -3
Query: 317 LS*AQQSGRGAPFHSLRHSSSGSMVL 240
LS AQQSGRGAPFHSLRHSSSGSM L
Sbjct: 578 LSTAQQSGRGAPFHSLRHSSSGSMCL 501
Score = 26.3 bits (51), Expect(4) = 1e-025
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = -2 / -3
Query: 49 LGXRARTCCSNSATL 5
LG AR CSNSATL
Sbjct: 311 LGSAARMFCSNSATL 267
Score = 24.4 bits (47), Expect(4) = 1e-025
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = -2 / -2
Query: 226 GHEHLVELLAG 194
GH+HLV+LL G
Sbjct: 489 GHQHLVQLLPG 457
Score = 24.0 bits (46), Expect(3) = 4e-029
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +3 / +2
Query: 195 PARSSTRCSWP 227
P RS TRC WP
Sbjct: 458 PGRS*TRCWWP 490
>gb|BU990224.1|BU990224 HF24H03r HF Hordeum vulgare subsp. vulgare cDNA clone HF24H03
5-PRIME, mRNA sequence
Length = 591
Score = 85.4 bits (180), Expect(3) = 4e-029
Identities = 32/41 (78%), Positives = 37/41 (90%)
Frame = +1 / +3
Query: 73 VESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
VE+G PL PNRI++CRSYPLY+FVRE GTEYLTGE+TRSP
Sbjct: 336 VENGTPLAPNRIKDCRSYPLYQFVREVCGTEYLTGEKTRSP 458
Score = 64.8 bits (135), Expect(4) = 1e-025
Identities = 31/54 (57%), Positives = 33/54 (61%)
Frame = -1 / -3
Query: 194 GDLVLSPVRYSVPTSSRTNRYSG*DRHSLILLGTRGXPLSTXARXXXXPWAXRA 33
GD V SPVRYSVP +SRTN SG*+R SLI LG G P ST AR A
Sbjct: 457 GDRVFSPVRYSVPHTSRTNW*SG*ERQSLIRLGASGVPFSTDARAASTSLGSAA 296
Score = 56.1 bits (116), Expect(3) = 4e-029
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +1 / +3
Query: 247 IDPLLECLKEWNGAPLPLC*A 309
IDPLLECLKEWNGAPLPLC*A
Sbjct: 507 IDPLLECLKEWNGAPLPLC*A 569
Score = 55.6 bits (115), Expect(4) = 1e-025
Identities = 24/26 (92%), Positives = 24/26 (92%)
Frame = -1 / -3
Query: 317 LS*AQQSGRGAPFHSLRHSSSGSMVL 240
LS AQQSGRGAPFHSLRHSSSGSM L
Sbjct: 577 LSTAQQSGRGAPFHSLRHSSSGSMCL 500
Score = 26.3 bits (51), Expect(4) = 1e-025
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = -2 / -3
Query: 49 LGXRARTCCSNSATL 5
LG AR CSNSATL
Sbjct: 310 LGSAARMFCSNSATL 266
Score = 24.4 bits (47), Expect(4) = 1e-025
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = -2 / -2
Query: 226 GHEHLVELLAG 194
GH+HLV+LL G
Sbjct: 488 GHQHLVQLLPG 456
Score = 24.0 bits (46), Expect(3) = 4e-029
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +3 / +1
Query: 195 PARSSTRCSWP 227
P RS TRC WP
Sbjct: 457 PGRS*TRCWWP 489
>gb|BF258018.2|BF258018 HVSMEf0014I06f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0014I06f, mRNA sequence
Length = 570
Score = 85.4 bits (180), Expect(3) = 4e-029
Identities = 32/41 (78%), Positives = 37/41 (90%)
Frame = +1 / -2
Query: 73 VESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
VE+G PL PNRI++CRSYPLY+FVRE GTEYLTGE+TRSP
Sbjct: 296 VENGTPLAPNRIKDCRSYPLYQFVREVCGTEYLTGEKTRSP 174
Score = 64.8 bits (135), Expect(4) = 1e-025
Identities = 31/51 (60%), Positives = 33/51 (64%)
Frame = -1 / +1
Query: 194 GDLVLSPVRYSVPTSSRTNRYSG*DRHSLILLGTRGXPLSTXARXXXXPWA 42
GD V SPVRYSVP +SRTN SG*+R SLI LG G P ST AR A
Sbjct: 175 GDRVFSPVRYSVPHTSRTNW*SG*ERQSLIRLGASGVPFSTDARAAFTSLA 327
Score = 56.1 bits (116), Expect(3) = 4e-029
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +1 / -2
Query: 247 IDPLLECLKEWNGAPLPLC*A 309
IDPLLECLKEWNGAPLPLC*A
Sbjct: 125 IDPLLECLKEWNGAPLPLC*A 63
Score = 55.6 bits (115), Expect(4) = 1e-025
Identities = 24/26 (92%), Positives = 24/26 (92%)
Frame = -1 / +1
Query: 317 LS*AQQSGRGAPFHSLRHSSSGSMVL 240
LS AQQSGRGAPFHSLRHSSSGSM L
Sbjct: 55 LSTAQQSGRGAPFHSLRHSSSGSMCL 132
Score = 26.3 bits (51), Expect(4) = 1e-025
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = -2 / +3
Query: 58 LHLLGXRARTCCSNSATL 5
LHLLG AR SNS TL
Sbjct: 312 LHLLGSAARMFWSNSRTL 365
Score = 24.4 bits (47), Expect(4) = 1e-025
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = -2 / +3
Query: 226 GHEHLVELLAG 194
GH+HLV+LL G
Sbjct: 144 GHQHLVQLLPG 176
Score = 24.0 bits (46), Expect(3) = 4e-029
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +3 / -3
Query: 195 PARSSTRCSWP 227
P RS TRC WP
Sbjct: 175 PGRS*TRCWWP 143
>gb|CB858981.1|CB858981 HI08O15w HI Hordeum vulgare subsp. vulgare cDNA clone HI08O15
3-PRIME, mRNA sequence
Length = 572
Score = 85.4 bits (180), Expect(3) = 4e-029
Identities = 32/41 (78%), Positives = 37/41 (90%)
Frame = +1 / -3
Query: 73 VESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
VE+G PL PNRI++CRSYPLY+FVRE GTEYLTGE+TRSP
Sbjct: 513 VENGTPLAPNRIKDCRSYPLYQFVREVCGTEYLTGEKTRSP 391
Score = 64.8 bits (135), Expect(3) = 5e-023
Identities = 31/54 (57%), Positives = 33/54 (61%)
Frame = -1 / +2
Query: 194 GDLVLSPVRYSVPTSSRTNRYSG*DRHSLILLGTRGXPLSTXARXXXXPWAXRA 33
GD V SPVRYSVP +SRTN SG*+R SLI LG G P ST AR A
Sbjct: 392 GDRVFSPVRYSVPHTSRTNW*SG*ERQSLIRLGASGVPFSTDARAASTSLGSAA 553
Score = 56.1 bits (116), Expect(3) = 4e-029
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +1 / -3
Query: 247 IDPLLECLKEWNGAPLPLC*A 309
IDPLLECLKEWNGAPLPLC*A
Sbjct: 342 IDPLLECLKEWNGAPLPLC*A 280
Score = 55.6 bits (115), Expect(3) = 5e-023
Identities = 24/26 (92%), Positives = 24/26 (92%)
Frame = -1 / +2
Query: 317 LS*AQQSGRGAPFHSLRHSSSGSMVL 240
LS AQQSGRGAPFHSLRHSSSGSM L
Sbjct: 272 LSTAQQSGRGAPFHSLRHSSSGSMCL 349
Score = 24.4 bits (47), Expect(3) = 5e-023
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = -2 / +1
Query: 226 GHEHLVELLAG 194
GH+HLV+LL G
Sbjct: 361 GHQHLVQLLPG 393
Score = 24.0 bits (46), Expect(3) = 4e-029
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +3 / -1
Query: 195 PARSSTRCSWP 227
P RS TRC WP
Sbjct: 392 PGRS*TRCWWP 360
>gb|BQ662656.1|BQ662656 HS03H24u HS Hordeum vulgare subsp. vulgare cDNA clone HS03H24
3-PRIME, mRNA sequence
Length = 557
Score = 85.4 bits (180), Expect(3) = 4e-029
Identities = 32/41 (78%), Positives = 37/41 (90%)
Frame = +1 / -3
Query: 73 VESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
VE+G PL PNRI++CRSYPLY+FVRE GTEYLTGE+TRSP
Sbjct: 486 VENGTPLAPNRIKDCRSYPLYQFVREVCGTEYLTGEKTRSP 364
Score = 64.8 bits (135), Expect(4) = 1e-025
Identities = 31/54 (57%), Positives = 33/54 (61%)
Frame = -1 / +2
Query: 194 GDLVLSPVRYSVPTSSRTNRYSG*DRHSLILLGTRGXPLSTXARXXXXPWAXRA 33
GD V SPVRYSVP +SRTN SG*+R SLI LG G P ST AR A
Sbjct: 365 GDRVFSPVRYSVPHTSRTNW*SG*ERQSLIRLGASGVPFSTDARAASTSLGSAA 526
Score = 56.1 bits (116), Expect(3) = 4e-029
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +1 / -3
Query: 247 IDPLLECLKEWNGAPLPLC*A 309
IDPLLECLKEWNGAPLPLC*A
Sbjct: 315 IDPLLECLKEWNGAPLPLC*A 253
Score = 55.6 bits (115), Expect(4) = 1e-025
Identities = 24/26 (92%), Positives = 24/26 (92%)
Frame = -1 / +2
Query: 317 LS*AQQSGRGAPFHSLRHSSSGSMVL 240
LS AQQSGRGAPFHSLRHSSSGSM L
Sbjct: 245 LSTAQQSGRGAPFHSLRHSSSGSMCL 322
Score = 26.3 bits (51), Expect(4) = 1e-025
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = -2 / +2
Query: 49 LGXRARTCCSNSATL 5
LG AR CSNSATL
Sbjct: 512 LGSAARMFCSNSATL 556
Score = 24.4 bits (47), Expect(4) = 1e-025
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = -2 / +1
Query: 226 GHEHLVELLAG 194
GH+HLV+LL G
Sbjct: 334 GHQHLVQLLPG 366
Score = 24.0 bits (46), Expect(3) = 4e-029
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +3 / -1
Query: 195 PARSSTRCSWP 227
P RS TRC WP
Sbjct: 365 PGRS*TRCWWP 333
>gb|BQ768383.1|BQ768383 EBro08_SQ011_F13_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ011_F13 5', mRNA sequence
Length = 513
Score = 85.4 bits (180), Expect(3) = 4e-029
Identities = 32/41 (78%), Positives = 37/41 (90%)
Frame = +1 / +3
Query: 73 VESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
VE+G PL PNRI++CRSYPLY+FVRE GTEYLTGE+TRSP
Sbjct: 246 VENGTPLAPNRIKDCRSYPLYQFVREVCGTEYLTGEKTRSP 368
Score = 64.8 bits (135), Expect(4) = 1e-025
Identities = 31/54 (57%), Positives = 33/54 (61%)
Frame = -1 / -3
Query: 194 GDLVLSPVRYSVPTSSRTNRYSG*DRHSLILLGTRGXPLSTXARXXXXPWAXRA 33
GD V SPVRYSVP +SRTN SG*+R SLI LG G P ST AR A
Sbjct: 367 GDRVFSPVRYSVPHTSRTNW*SG*ERQSLIRLGASGVPFSTDARAASTSLGSAA 206
Score = 56.1 bits (116), Expect(3) = 4e-029
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +1 / +3
Query: 247 IDPLLECLKEWNGAPLPLC*A 309
IDPLLECLKEWNGAPLPLC*A
Sbjct: 417 IDPLLECLKEWNGAPLPLC*A 479
Score = 55.6 bits (115), Expect(4) = 1e-025
Identities = 24/26 (92%), Positives = 24/26 (92%)
Frame = -1 / -3
Query: 317 LS*AQQSGRGAPFHSLRHSSSGSMVL 240
LS AQQSGRGAPFHSLRHSSSGSM L
Sbjct: 487 LSTAQQSGRGAPFHSLRHSSSGSMCL 410
Score = 26.3 bits (51), Expect(4) = 1e-025
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = -2 / -3
Query: 49 LGXRARTCCSNSATL 5
LG AR CSNSATL
Sbjct: 220 LGSAARMFCSNSATL 176
Score = 24.4 bits (47), Expect(4) = 1e-025
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = -2 / -2
Query: 226 GHEHLVELLAG 194
GH+HLV+LL G
Sbjct: 398 GHQHLVQLLPG 366
Score = 24.0 bits (46), Expect(3) = 4e-029
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +3 / +1
Query: 195 PARSSTRCSWP 227
P RS TRC WP
Sbjct: 367 PGRS*TRCWWP 399
>gb|AL503163.1|AL503163 AL503163 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW09O20u 3', mRNA sequence
Length = 431
Score = 85.4 bits (180), Expect(3) = 4e-029
Identities = 32/41 (78%), Positives = 37/41 (90%)
Frame = +1 / -2
Query: 73 VESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
VE+G PL PNRI++CRSYPLY+FVRE GTEYLTGE+TRSP
Sbjct: 274 VENGTPLAPNRIKDCRSYPLYQFVREVCGTEYLTGEKTRSP 152
Score = 64.8 bits (135), Expect(4) = 9e-026
Identities = 31/54 (57%), Positives = 33/54 (61%)
Frame = -1 / +3
Query: 194 GDLVLSPVRYSVPTSSRTNRYSG*DRHSLILLGTRGXPLSTXARXXXXPWAXRA 33
GD V SPVRYSVP +SRTN SG*+R SLI LG G P ST AR A
Sbjct: 153 GDRVFSPVRYSVPHTSRTNW*SG*ERQSLIRLGASGVPFSTDARAASTSLGSAA 314
Score = 56.1 bits (116), Expect(3) = 4e-029
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +1 / -2
Query: 247 IDPLLECLKEWNGAPLPLC*A 309
IDPLLECLKEWNGAPLPLC*A
Sbjct: 103 IDPLLECLKEWNGAPLPLC*A 41
Score = 55.6 bits (115), Expect(4) = 9e-026
Identities = 24/26 (92%), Positives = 24/26 (92%)
Frame = -1 / +3
Query: 317 LS*AQQSGRGAPFHSLRHSSSGSMVL 240
LS AQQSGRGAPFHSLRHSSSGSM L
Sbjct: 33 LSTAQQSGRGAPFHSLRHSSSGSMCL 110
Score = 26.3 bits (51), Expect(4) = 9e-026
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = -2 / +3
Query: 49 LGXRARTCCSNSATL 5
LG AR CSNSATL
Sbjct: 300 LGSAARMFCSNSATL 344
Score = 24.4 bits (47), Expect(4) = 9e-026
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = -2 / +2
Query: 226 GHEHLVELLAG 194
GH+HLV+LL G
Sbjct: 122 GHQHLVQLLPG 154
Score = 24.0 bits (46), Expect(3) = 4e-029
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +3 / -3
Query: 195 PARSSTRCSWP 227
P RS TRC WP
Sbjct: 153 PGRS*TRCWWP 121
>gb|BQ756566.1|BQ756566 EBem09_SQ003_B12_R embryo, 1 Day germination, no treatment, cv
Optic, EBem09 Hordeum vulgare subsp. vulgare cDNA clone
EBem09_SQ003_B12 5', mRNA sequence
Length = 389
Score = 85.4 bits (180), Expect(3) = 4e-029
Identities = 32/41 (78%), Positives = 37/41 (90%)
Frame = +1 / +1
Query: 73 VESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
VE+G PL PNRI++CRSYPLY+FVRE GTEYLTGE+TRSP
Sbjct: 145 VENGTPLAPNRIKDCRSYPLYQFVREVCGTEYLTGEKTRSP 267
Score = 64.8 bits (135), Expect(4) = 7e-026
Identities = 31/54 (57%), Positives = 33/54 (61%)
Frame = -1 / -1
Query: 194 GDLVLSPVRYSVPTSSRTNRYSG*DRHSLILLGTRGXPLSTXARXXXXPWAXRA 33
GD V SPVRYSVP +SRTN SG*+R SLI LG G P ST AR A
Sbjct: 266 GDRVFSPVRYSVPHTSRTNW*SG*ERQSLIRLGASGVPFSTDARAASTSLGSAA 105
Score = 56.1 bits (116), Expect(3) = 4e-029
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +1 / +1
Query: 247 IDPLLECLKEWNGAPLPLC*A 309
IDPLLECLKEWNGAPLPLC*A
Sbjct: 316 IDPLLECLKEWNGAPLPLC*A 378
Score = 55.6 bits (115), Expect(4) = 7e-026
Identities = 24/26 (92%), Positives = 24/26 (92%)
Frame = -1 / -1
Query: 317 LS*AQQSGRGAPFHSLRHSSSGSMVL 240
LS AQQSGRGAPFHSLRHSSSGSM L
Sbjct: 386 LSTAQQSGRGAPFHSLRHSSSGSMCL 309
Score = 26.3 bits (51), Expect(4) = 7e-026
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = -2 / -1
Query: 49 LGXRARTCCSNSATL 5
LG AR CSNSATL
Sbjct: 119 LGSAARMFCSNSATL 75
Score = 24.4 bits (47), Expect(4) = 7e-026
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = -2 / -3
Query: 226 GHEHLVELLAG 194
GH+HLV+LL G
Sbjct: 297 GHQHLVQLLPG 265
Score = 24.0 bits (46), Expect(3) = 4e-029
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +3 / +2
Query: 195 PARSSTRCSWP 227
P RS TRC WP
Sbjct: 266 PGRS*TRCWWP 298
>gb|AL500991.1|AL500991 AL500991 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW02K13u 3', mRNA sequence
Length = 385
Score = 85.4 bits (180), Expect(3) = 4e-029
Identities = 32/41 (78%), Positives = 37/41 (90%)
Frame = +1 / -1
Query: 73 VESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
VE+G PL PNRI++CRSYPLY+FVRE GTEYLTGE+TRSP
Sbjct: 274 VENGTPLAPNRIKDCRSYPLYQFVREVCGTEYLTGEKTRSP 152
Score = 66.1 bits (138), Expect(4) = 3e-026
Identities = 31/54 (57%), Positives = 33/54 (61%)
Frame = -1 / +3
Query: 194 GDLVLSPVRYSVPTSSRTNRYSG*DRHSLILLGTRGXPLSTXARXXXXPWAXRA 33
GD V SPVRYSVP +SRTN SG*+R SLI LG G P ST AR A
Sbjct: 153 GDRVFSPVRYSVPHTSRTNWXSG*ERQSLIRLGASGVPFSTDARAASTSLGSAA 314
Score = 56.1 bits (116), Expect(3) = 4e-029
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +1 / -1
Query: 247 IDPLLECLKEWNGAPLPLC*A 309
IDPLLECLKEWNGAPLPLC*A
Sbjct: 103 IDPLLECLKEWNGAPLPLC*A 41
Score = 55.6 bits (115), Expect(4) = 3e-026
Identities = 24/26 (92%), Positives = 24/26 (92%)
Frame = -1 / +3
Query: 317 LS*AQQSGRGAPFHSLRHSSSGSMVL 240
LS AQQSGRGAPFHSLRHSSSGSM L
Sbjct: 33 LSTAQQSGRGAPFHSLRHSSSGSMCL 110
Score = 26.3 bits (51), Expect(4) = 3e-026
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = -2 / +3
Query: 49 LGXRARTCCSNSATL 5
LG AR CSNSATL
Sbjct: 300 LGSAARMFCSNSATL 344
Score = 24.4 bits (47), Expect(4) = 3e-026
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = -2 / +2
Query: 226 GHEHLVELLAG 194
GH+HLV+LL G
Sbjct: 122 GHQHLVQLLPG 154
Score = 24.0 bits (46), Expect(3) = 4e-029
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +3 / -2
Query: 195 PARSSTRCSWP 227
P RS TRC WP
Sbjct: 153 PGRS*TRCWWP 121
>gb|BI955715.1|BI955715 HVSMEm0024C22f Hordeum vulgare green seedling EST library
HVcDNA0014 (Blumeria infected) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEm0024C22f, mRNA sequence
Length = 517
Score = 79.9 bits (168), Expect(3) = 2e-027
Identities = 30/40 (75%), Positives = 35/40 (87%)
Frame = +1 / +1
Query: 76 ESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
E+G L PNRI++CRSYPLY+FVRE GTEYLTGE+TRSP
Sbjct: 1 ENGTALAPNRIKDCRSYPLYQFVREVCGTEYLTGEKTRSP 120
Score = 55.6 bits (115), Expect(3) = 2e-027
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = +1 / +1
Query: 247 IDPLLECLKEWNGAPLPLC*A 309
+DPLLECLKEWNGAPLPLC*A
Sbjct: 169 VDPLLECLKEWNGAPLPLC*A 231
Score = 24.0 bits (46), Expect(3) = 2e-027
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +3 / +2
Query: 195 PARSSTRCSWP 227
P RS TRC WP
Sbjct: 119 PGRS*TRCWWP 151
>gb|BI777236.2|BI777236 EBro03_SQ002_I15_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ002_I15 5', mRNA sequence
Length = 445
Score = 85.4 bits (180), Expect(3) = 3e-025
Identities = 32/41 (78%), Positives = 37/41 (90%)
Frame = +1 / +3
Query: 73 VESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
VE+G PL PNRI++CRSYPLY+FVRE GTEYLTGE+TRSP
Sbjct: 228 VENGTPLAPNRIKDCRSYPLYQFVREVCGTEYLTGEKTRSP 350
Score = 64.8 bits (135), Expect(4) = 5e-022
Identities = 31/54 (57%), Positives = 33/54 (61%)
Frame = -1 / -1
Query: 194 GDLVLSPVRYSVPTSSRTNRYSG*DRHSLILLGTRGXPLSTXARXXXXPWAXRA 33
GD V SPVRYSVP +SRTN SG*+R SLI LG G P ST AR A
Sbjct: 349 GDRVFSPVRYSVPHTSRTNW*SG*ERQSLIRLGASGVPFSTDARAASTSLGSAA 188
Score = 42.8 bits (87), Expect(3) = 3e-025
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +1 / +3
Query: 247 IDPLLECLKEWNGAP 291
IDPLLECLKEWNGAP
Sbjct: 399 IDPLLECLKEWNGAP 443
Score = 42.8 bits (87), Expect(4) = 5e-022
Identities = 17/18 (94%), Positives = 17/18 (94%)
Frame = -1 / -1
Query: 293 RGAPFHSLRHSSSGSMVL 240
RGAPFHSLRHSSSGSM L
Sbjct: 445 RGAPFHSLRHSSSGSMCL 392
Score = 26.3 bits (51), Expect(4) = 5e-022
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = -2 / -1
Query: 49 LGXRARTCCSNSATL 5
LG AR CSNSATL
Sbjct: 202 LGSAARMFCSNSATL 158
Score = 24.4 bits (47), Expect(4) = 5e-022
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = -2 / -3
Query: 226 GHEHLVELLAG 194
GH+HLV+LL G
Sbjct: 380 GHQHLVQLLPG 348
Score = 24.0 bits (46), Expect(3) = 3e-025
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +3 / +1
Query: 195 PARSSTRCSWP 227
P RS TRC WP
Sbjct: 349 PGRS*TRCWWP 381
>gb|CB881918.1|CB881918 HM11E17w HM Hordeum vulgare subsp. vulgare cDNA clone HM11E17
3-PRIME, mRNA sequence
Length = 620
Score = 85.4 bits (180), Expect(4) = 8e-025
Identities = 32/41 (78%), Positives = 37/41 (90%)
Frame = +1 / -3
Query: 73 VESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
VE+G PL PNRI++CRSYPLY+FVRE GTEYLTGE+TRSP
Sbjct: 255 VENGTPLAPNRIKDCRSYPLYQFVREVCGTEYLTGEKTRSP 133
Score = 64.8 bits (135), Expect(5) = 2e-021
Identities = 31/54 (57%), Positives = 33/54 (61%)
Frame = -1 / +2
Query: 194 GDLVLSPVRYSVPTSSRTNRYSG*DRHSLILLGTRGXPLSTXARXXXXPWAXRA 33
GD V SPVRYSVP +SRTN SG*+R SLI LG G P ST AR A
Sbjct: 134 GDRVFSPVRYSVPHTSRTNW*SG*ERQSLIRLGASGVPFSTDARAASTSLGSAA 295
Score = 35.0 bits (70), Expect(4) = 8e-025
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = +1 / -3
Query: 247 IDPLLECLKEWNGAP 291
IDPLLECLKEW P
Sbjct: 84 IDPLLECLKEWTARP 40
Score = 31.8 bits (63), Expect(5) = 2e-021
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = -1 / +2
Query: 293 RGAPFHSLRHSSSGSMVL 240
+G HSLRHSSSGSM L
Sbjct: 38 QGRAVHSLRHSSSGSMCL 91
Score = 26.3 bits (51), Expect(5) = 2e-021
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = -2 / +2
Query: 49 LGXRARTCCSNSATL 5
LG AR CSNSATL
Sbjct: 281 LGSAARMFCSNSATL 325
Score = 25.8 bits (50), Expect(5) = 2e-021
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = -1 / +3
Query: 317 LS*AQQSGRGAP 282
LS AQQSGRGAP
Sbjct: 15 LSTAQQSGRGAP 50
Score = 24.4 bits (47), Expect(5) = 2e-021
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = -2 / +1
Query: 226 GHEHLVELLAG 194
GH+HLV+LL G
Sbjct: 103 GHQHLVQLLPG 135
Score = 24.0 bits (46), Expect(4) = 8e-025
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +3 / -1
Query: 195 PARSSTRCSWP 227
P RS TRC WP
Sbjct: 134 PGRS*TRCWWP 102
Score = 23.5 bits (45), Expect(4) = 8e-025
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +2 / -3
Query: 281 TARPCRSAELS 313
TARPC SAE S
Sbjct: 51 TARPCHSAEQS 19
>emb|Z49145.1|HVPAL2MR H.vulgare partial PAL mRNA for phenylalanine ammonia-lyase (1670 bp)
Length = 1670
Score = 79.0 bits (166), Expect(2) = 5e-023
Identities = 31/41 (75%), Positives = 35/41 (85%)
Frame = +1 / +3
Query: 73 VESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
VE+G NRI ECRSYPLYRFVR+E+GTEYLTGE+TRSP
Sbjct: 1200 VENGTAAQQNRISECRSYPLYRFVRKELGTEYLTGEKTRSP 1322
Score = 48.3 bits (99), Expect(2) = 5e-023
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = +1 / +3
Query: 247 IDPLLECLKEWNGAPLPLC*AQ 312
ID LLECLKEWNG PLP+C* +
Sbjct: 1371 IDALLECLKEWNGEPLPIC*TE 1436
>gb|AV919053.1|AV919053 AV919053 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags4d18 3', mRNA sequence
Length = 717
Score = 79.0 bits (166), Expect(2) = 5e-023
Identities = 31/41 (75%), Positives = 35/41 (85%)
Frame = +1 / -3
Query: 73 VESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
VE+G NRI ECRSYPLYRFVR+E+GTEYLTGE+TRSP
Sbjct: 460 VENGTAAQQNRITECRSYPLYRFVRKELGTEYLTGEKTRSP 338
Score = 48.3 bits (99), Expect(2) = 5e-023
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = +1 / -3
Query: 247 IDPLLECLKEWNGAPLPLC*AQ 312
ID LLECLKEWNG PLP+C* +
Sbjct: 289 IDALLECLKEWNGEPLPIC*TE 224
>gb|BQ768801.1|BQ768801 EBro08_SQ012_P15_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ012_P15 5', mRNA sequence
Length = 679
Score = 79.0 bits (166), Expect(2) = 5e-023
Identities = 31/41 (75%), Positives = 35/41 (85%)
Frame = +1 / +1
Query: 73 VESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
VE+G NRI ECRSYPLYRFVR+E+GTEYLTGE+TRSP
Sbjct: 439 VENGTAAQQNRISECRSYPLYRFVRKELGTEYLTGEKTRSP 561
Score = 48.3 bits (99), Expect(2) = 5e-023
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = +1 / +1
Query: 247 IDPLLECLKEWNGAPLPLC*AQ 312
ID LLECLKEWNG PLP+C* +
Sbjct: 610 IDALLECLKEWNGEPLPIC*TE 675
>gb|AL502364.1|AL502364 AL502364 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW07F11u 3', mRNA sequence
Length = 661
Score = 79.0 bits (166), Expect(2) = 5e-023
Identities = 31/41 (75%), Positives = 35/41 (85%)
Frame = +1 / -1
Query: 73 VESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
VE+G NRI ECRSYPLYRFVR+E+GTEYLTGE+TRSP
Sbjct: 505 VENGTAAQQNRISECRSYPLYRFVRKELGTEYLTGEKTRSP 383
Score = 48.3 bits (99), Expect(2) = 5e-023
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = +1 / -1
Query: 247 IDPLLECLKEWNGAPLPLC*AQ 312
ID LLECLKEWNG PLP+C* +
Sbjct: 334 IDALLECLKEWNGEPLPIC*TE 269
>gb|AV919026.1|AV919026 AV919026 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags4b16 3', mRNA sequence
Length = 659
Score = 79.0 bits (166), Expect(2) = 5e-023
Identities = 31/41 (75%), Positives = 35/41 (85%)
Frame = +1 / -2
Query: 73 VESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
VE+G NRI ECRSYPLYRFVR+E+GTEYLTGE+TRSP
Sbjct: 463 VENGTAAQQNRITECRSYPLYRFVRKELGTEYLTGEKTRSP 341
Score = 48.3 bits (99), Expect(2) = 5e-023
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = +1 / -2
Query: 247 IDPLLECLKEWNGAPLPLC*AQ 312
ID LLECLKEWNG PLP+C* +
Sbjct: 292 IDALLECLKEWNGEPLPIC*TE 227
>gb|AV928876.1|AV928876 AV928876 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd20a10 3', mRNA sequence
Length = 644
Score = 79.0 bits (166), Expect(2) = 5e-023
Identities = 31/41 (75%), Positives = 35/41 (85%)
Frame = +1 / -2
Query: 73 VESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
VE+G NRI ECRSYPLYRFVR+E+GTEYLTGE+TRSP
Sbjct: 451 VENGTAAQQNRISECRSYPLYRFVRKELGTEYLTGEKTRSP 329
Score = 48.3 bits (99), Expect(2) = 5e-023
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = +1 / -2
Query: 247 IDPLLECLKEWNGAPLPLC*AQ 312
ID LLECLKEWNG PLP+C* +
Sbjct: 280 IDALLECLKEWNGEPLPIC*TE 215
>gb|AL501352.1|AL501352 AL501352 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW03O13u 3', mRNA sequence
Length = 626
Score = 79.0 bits (166), Expect(2) = 5e-023
Identities = 31/41 (75%), Positives = 35/41 (85%)
Frame = +1 / -3
Query: 73 VESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
VE+G NRI ECRSYPLYRFVR+E+GTEYLTGE+TRSP
Sbjct: 435 VENGTAAQQNRITECRSYPLYRFVRKELGTEYLTGEKTRSP 313
Score = 48.3 bits (99), Expect(2) = 5e-023
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = +1 / -3
Query: 247 IDPLLECLKEWNGAPLPLC*AQ 312
ID LLECLKEWNG PLP+C* +
Sbjct: 264 IDALLECLKEWNGEPLPIC*TE 199
>gb|BM370557.2|BM370557 EBro08_SQ004_J10_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ004_J10 5', mRNA sequence
Length = 620
Score = 79.0 bits (166), Expect(2) = 5e-023
Identities = 31/41 (75%), Positives = 35/41 (85%)
Frame = +1 / +2
Query: 73 VESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
VE+G PNRI +CRSYPLYRFVREE+GT YLTGE+TRSP
Sbjct: 188 VENGTAAEPNRIVDCRSYPLYRFVREELGTVYLTGEKTRSP 310
Score = 48.3 bits (99), Expect(2) = 5e-023
Identities = 18/20 (90%), Positives = 18/20 (90%)
Frame = +1 / +2
Query: 247 IDPLLECLKEWNGAPLPLC* 306
ID LLECLKEWNG PLPLC*
Sbjct: 359 IDALLECLKEWNGEPLPLC* 418
>gb|BQ468898.1|BQ468898 HM02L09r HM Hordeum vulgare subsp. vulgare cDNA clone HM02L09
5-PRIME, mRNA sequence
Length = 579
Score = 79.0 bits (166), Expect(2) = 5e-023
Identities = 31/41 (75%), Positives = 35/41 (85%)
Frame = +1 / +1
Query: 73 VESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
VE+G NRI ECRSYPLYRFVR+E+GTEYLTGE+TRSP
Sbjct: 100 VENGTAAQQNRITECRSYPLYRFVRKELGTEYLTGEKTRSP 222
Score = 48.3 bits (99), Expect(2) = 5e-023
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = +1 / +1
Query: 247 IDPLLECLKEWNGAPLPLC*AQ 312
ID LLECLKEWNG PLP+C* +
Sbjct: 271 IDALLECLKEWNGEPLPIC*TE 336
>gb|BJ466939.1|BJ466939 BJ466939 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags35c02 3', mRNA sequence
Length = 575
Score = 79.0 bits (166), Expect(2) = 5e-023
Identities = 31/41 (75%), Positives = 35/41 (85%)
Frame = +1 / -3
Query: 73 VESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
VE+G NRI ECRSYPLYRFVR+E+GTEYLTGE+TRSP
Sbjct: 474 VENGTAAQQNRITECRSYPLYRFVRKELGTEYLTGEKTRSP 352
Score = 48.3 bits (99), Expect(2) = 5e-023
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = +1 / -3
Query: 247 IDPLLECLKEWNGAPLPLC*AQ 312
ID LLECLKEWNG PLP+C* +
Sbjct: 303 IDALLECLKEWNGEPLPIC*TE 238
>gb|AV921618.1|AV921618 AV921618 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags12a21 3', mRNA sequence
Length = 548
Score = 79.0 bits (166), Expect(2) = 5e-023
Identities = 31/41 (75%), Positives = 35/41 (85%)
Frame = +1 / -3
Query: 73 VESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
VE+G NRI ECRSYPLYRFVR+E+GTEYLTGE+TRSP
Sbjct: 441 VENGTAAQQNRISECRSYPLYRFVRKELGTEYLTGEKTRSP 319
Score = 48.3 bits (99), Expect(2) = 5e-023
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = +1 / -3
Query: 247 IDPLLECLKEWNGAPLPLC*AQ 312
ID LLECLKEWNG PLP+C* +
Sbjct: 270 IDALLECLKEWNGEPLPIC*TE 205
>gb|AV928881.1|AV928881 AV928881 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd20a21 3', mRNA sequence
Length = 538
Score = 79.0 bits (166), Expect(2) = 5e-023
Identities = 31/41 (75%), Positives = 35/41 (85%)
Frame = +1 / -1
Query: 73 VESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
VE+G NRI ECRSYPLYRFVR+E+GTEYLTGE+TRSP
Sbjct: 451 VENGTAAQQNRISECRSYPLYRFVRKELGTEYLTGEKTRSP 329
Score = 48.3 bits (99), Expect(2) = 5e-023
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = +1 / -1
Query: 247 IDPLLECLKEWNGAPLPLC*AQ 312
ID LLECLKEWNG PLP+C* +
Sbjct: 280 IDALLECLKEWNGEPLPIC*TE 215
>gb|BQ767217.1|BQ767217 EBro08_SQ008_E10_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ008_E10 5', mRNA sequence
Length = 511
Score = 79.0 bits (166), Expect(2) = 5e-023
Identities = 31/41 (75%), Positives = 35/41 (85%)
Frame = +1 / +1
Query: 73 VESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
VE+G NRI ECRSYPLYRFVR+E+GTEYLTGE+TRSP
Sbjct: 247 VENGTAAQQNRITECRSYPLYRFVRKELGTEYLTGEKTRSP 369
Score = 48.3 bits (99), Expect(2) = 5e-023
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = +1 / +1
Query: 247 IDPLLECLKEWNGAPLPLC*AQ 312
ID LLECLKEWNG PLP+C* +
Sbjct: 418 IDALLECLKEWNGEPLPIC*TE 483
>gb|BQ765396.1|BQ765396 EBro03_SQ007_E05_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ007_E05 5', mRNA sequence
Length = 478
Score = 79.0 bits (166), Expect(2) = 5e-023
Identities = 31/41 (75%), Positives = 35/41 (85%)
Frame = +1 / -1
Query: 73 VESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
VE+G PNRI +CRSYPLYRFVREE+GT YLTGE+TRSP
Sbjct: 406 VENGTAAEPNRIVDCRSYPLYRFVREELGTVYLTGEKTRSP 284
Score = 48.3 bits (99), Expect(2) = 5e-023
Identities = 18/20 (90%), Positives = 18/20 (90%)
Frame = +1 / -1
Query: 247 IDPLLECLKEWNGAPLPLC* 306
ID LLECLKEWNG PLPLC*
Sbjct: 235 IDALLECLKEWNGEPLPLC* 176
>gb|BU968202.1|BU968202 HB06L24r BC Hordeum vulgare subsp. vulgare cDNA clone HB06L24
5-PRIME, mRNA sequence
Length = 402
Score = 79.0 bits (166), Expect(2) = 5e-023
Identities = 31/41 (75%), Positives = 35/41 (85%)
Frame = +1 / +2
Query: 73 VESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
VE+G NRI ECRSYPLYRFVR+E+GTEYLTGE+TRSP
Sbjct: 98 VENGTAAQQNRITECRSYPLYRFVRKELGTEYLTGEKTRSP 220
Score = 48.3 bits (99), Expect(2) = 5e-023
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = +1 / +2
Query: 247 IDPLLECLKEWNGAPLPLC*AQ 312
ID LLECLKEWNG PLP+C* +
Sbjct: 269 IDALLECLKEWNGEPLPIC*TE 334
>gb|BI778700.2|BI778700 EBro01_SQ001_C06_R root, 3 week, hydroponic grown, no treatment, cv
Optic, EBro01 Hordeum vulgare subsp. vulgare cDNA clone
EBro01_SQ001_C06 5', mRNA sequence
Length = 586
Score = 85.4 bits (180), Expect(3) = 6e-023
Identities = 32/41 (78%), Positives = 37/41 (90%)
Frame = +1 / +2
Query: 73 VESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
VE+G PL PNRI++CRSYPLY+FVRE GTEYLTGE+TRSP
Sbjct: 380 VENGTPLAPNRIKDCRSYPLYQFVREVCGTEYLTGEKTRSP 502
Score = 35.0 bits (70), Expect(3) = 6e-023
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +1 / +2
Query: 247 IDPLLECLKEWN 282
IDPLLECLKEWN
Sbjct: 551 IDPLLECLKEWN 586
Score = 24.0 bits (46), Expect(3) = 6e-023
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +3 / +3
Query: 195 PARSSTRCSWP 227
P RS TRC WP
Sbjct: 501 PGRS*TRCWWP 533
>gb|BQ762717.1|BQ762717 EBro02_SQ004_I20_R root, 3 week, hydroponic grown, low nitrogen, cv
Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone
EBro02_SQ004_I20 5', mRNA sequence
Length = 368
Score = 79.0 bits (166), Expect(2) = 7e-022
Identities = 31/41 (75%), Positives = 35/41 (85%)
Frame = +1 / +3
Query: 73 VESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
VE+G NRI ECRSYPLYRFVR+E+GTEYLTGE+TRSP
Sbjct: 96 VENGTATQQNRITECRSYPLYRFVRKELGTEYLTGEKTRSP 218
Score = 44.1 bits (90), Expect(2) = 7e-022
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = +1 / +3
Query: 247 IDPLLECLKEWNGAPLPLC* 306
ID LLECLK WNG PLP+C*
Sbjct: 267 IDALLECLKGWNGEPLPIC* 326
>gb|BF264601.3|BF264601 HV_CEa0009N21f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0009N21f, mRNA sequence
Length = 872
Score = 79.0 bits (166), Expect(2) = 8e-022
Identities = 31/41 (75%), Positives = 35/41 (85%)
Frame = +1 / +1
Query: 73 VESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
VE+G NRI ECRSYPLYRFVR+E+GTEYLTGE+TRSP
Sbjct: 412 VENGTATQQNRITECRSYPLYRFVRKELGTEYLTGEKTRSP 534
Score = 44.1 bits (90), Expect(2) = 8e-022
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = +1 / +1
Query: 247 IDPLLECLKEWNGAPLPLC* 306
ID LLECLK WNG PLP+C*
Sbjct: 583 IDALLECLKGWNGEPLPIC* 642
>gb|BQ765219.1|BQ765219 EBro03_SQ006_F15_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ006_F15 5', mRNA sequence
Length = 714
Score = 79.0 bits (166), Expect(2) = 8e-022
Identities = 31/41 (75%), Positives = 35/41 (85%)
Frame = +1 / +2
Query: 73 VESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
VE+G NRI ECRSYPLYRFVR+E+GTEYLTGE+TRSP
Sbjct: 299 VENGTATQQNRITECRSYPLYRFVRKELGTEYLTGEKTRSP 421
Score = 44.1 bits (90), Expect(2) = 8e-022
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = +1 / +2
Query: 247 IDPLLECLKEWNGAPLPLC* 306
ID LLECLK WNG PLP+C*
Sbjct: 470 IDALLECLKGWNGEPLPIC* 529
>gb|BJ459164.1|BJ459164 BJ459164 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak34p05 3', mRNA sequence
Length = 691
Score = 79.0 bits (166), Expect(2) = 8e-022
Identities = 31/41 (75%), Positives = 35/41 (85%)
Frame = +1 / -1
Query: 73 VESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
VE+G NRI ECRSYPLYRFVR+E+GTEYLTGE+TRSP
Sbjct: 499 VENGTATQQNRITECRSYPLYRFVRKELGTEYLTGEKTRSP 377
Score = 44.1 bits (90), Expect(2) = 8e-022
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = +1 / -1
Query: 247 IDPLLECLKEWNGAPLPLC* 306
ID LLECLK WNG PLP+C*
Sbjct: 328 IDALLECLKGWNGEPLPIC* 269
>gb|AV918666.1|AV918666 AV918666 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags21n01 3', mRNA sequence
Length = 670
Score = 79.0 bits (166), Expect(2) = 8e-022
Identities = 31/41 (75%), Positives = 35/41 (85%)
Frame = +1 / -2
Query: 73 VESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
VE+G NRI ECRSYPLYRFVR+E+GTEYLTGE+TRSP
Sbjct: 474 VENGTATQQNRITECRSYPLYRFVRKELGTEYLTGEKTRSP 352
Score = 44.1 bits (90), Expect(2) = 8e-022
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = +1 / -2
Query: 247 IDPLLECLKEWNGAPLPLC* 306
ID LLECLK WNG PLP+C*
Sbjct: 303 IDALLECLKGWNGEPLPIC* 244
>gb|BQ765192.1|BQ765192 EBro03_SQ006_A15_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ006_A15 5', mRNA sequence
Length = 617
Score = 79.0 bits (166), Expect(2) = 8e-022
Identities = 31/41 (75%), Positives = 35/41 (85%)
Frame = +1 / +1
Query: 73 VESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
VE+G NRI ECRSYPLYRFVR+E+GTEYLTGE+TRSP
Sbjct: 283 VENGTATQQNRITECRSYPLYRFVRKELGTEYLTGEKTRSP 405
Score = 44.1 bits (90), Expect(2) = 8e-022
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = +1 / +1
Query: 247 IDPLLECLKEWNGAPLPLC* 306
ID LLECLK WNG PLP+C*
Sbjct: 454 IDALLECLKGWNGEPLPIC* 513
>gb|BE437808.1|BE437808 SFR007.G02F990625 ITEC SFR Barley Leaf Epidermis Library Hordeum
vulgare subsp. vulgare cDNA clone SF, mRNA sequence
Length = 546
Score = 79.0 bits (166), Expect(2) = 8e-022
Identities = 31/41 (75%), Positives = 35/41 (85%)
Frame = +1 / +2
Query: 73 VESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
VE+G NRI ECRSYPLYRFVR+E+GTEYLTGE+TRSP
Sbjct: 77 VENGTATQQNRITECRSYPLYRFVRKELGTEYLTGEKTRSP 199
Score = 44.1 bits (90), Expect(2) = 8e-022
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = +1 / +2
Query: 247 IDPLLECLKEWNGAPLPLC* 306
ID LLECLK WNG PLP+C*
Sbjct: 248 IDALLECLKGWNGEPLPIC* 307
>gb|BE438184.1|BE438184 SFR010.H12F990722 ITEC SFR Barley Leaf Epidermis Library Hordeum
vulgare subsp. vulgare cDNA clone SFR010.H12, mRNA
sequence
Length = 534
Score = 79.0 bits (166), Expect(2) = 8e-022
Identities = 31/41 (75%), Positives = 35/41 (85%)
Frame = +1 / +2
Query: 73 VESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
VE+G NRI ECRSYPLYRFVR+E+GTEYLTGE+TRSP
Sbjct: 179 VENGTATQQNRITECRSYPLYRFVRKELGTEYLTGEKTRSP 301
Score = 44.1 bits (90), Expect(2) = 8e-022
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = +1 / +2
Query: 247 IDPLLECLKEWNGAPLPLC* 306
ID LLECLK WNG PLP+C*
Sbjct: 350 IDALLECLKGWNGEPLPIC* 409
>gb|BE437962.1|BE437962 SFR009.D04F990512 ITEC SFR Barley Leaf Epidermis Library Hordeum
vulgare subsp. vulgare cDNA clone SF, mRNA sequence
Length = 520
Score = 79.0 bits (166), Expect(2) = 8e-022
Identities = 31/41 (75%), Positives = 35/41 (85%)
Frame = +1 / +2
Query: 73 VESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
VE+G NRI ECRSYPLYRFVR+E+GTEYLTGE+TRSP
Sbjct: 77 VENGTATQQNRITECRSYPLYRFVRKELGTEYLTGEKTRSP 199
Score = 44.1 bits (90), Expect(2) = 8e-022
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = +1 / +2
Query: 247 IDPLLECLKEWNGAPLPLC* 306
ID LLECLK WNG PLP+C*
Sbjct: 248 IDALLECLKGWNGEPLPIC* 307
>gb|BQ661267.1|BQ661267 HM02L09u HM Hordeum vulgare subsp. vulgare cDNA clone HM02L09
3-PRIME, mRNA sequence
Length = 475
Score = 74.8 bits (157), Expect(2) = 8e-022
Identities = 29/39 (74%), Positives = 33/39 (84%)
Frame = +1 / -2
Query: 79 SGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
+G NRI ECRSYPLYRFVR+E+GTEYLTGE+TRSP
Sbjct: 474 NGTAAQQNRITECRSYPLYRFVRKELGTEYLTGEKTRSP 358
Score = 48.3 bits (99), Expect(2) = 8e-022
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = +1 / -2
Query: 247 IDPLLECLKEWNGAPLPLC*AQ 312
ID LLECLKEWNG PLP+C* +
Sbjct: 309 IDALLECLKEWNGEPLPIC*TE 244
>gb|BJ468382.1|BJ468382 BJ468382 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags38i22 3', mRNA sequence
Length = 602
Score = 79.0 bits (166), Expect(2) = 1e-021
Identities = 31/41 (75%), Positives = 35/41 (85%)
Frame = +1 / -1
Query: 73 VESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
VE+G PNRI +CRSYPLYRFVREE+GT YLTGE+TRSP
Sbjct: 455 VENGTAAEPNRIVDCRSYPLYRFVREELGTVYLTGEKTRSP 333
Score = 43.2 bits (88), Expect(2) = 1e-021
Identities = 16/21 (76%), Positives = 18/21 (85%)
Frame = +1 / -1
Query: 247 IDPLLECLKEWNGAPLPLC*A 309
ID LLECLKEWNG PLP+ *+
Sbjct: 284 IDALLECLKEWNGEPLPIS*S 222
>gb|AV921319.1|AV921319 AV921319 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags23a16 3', mRNA sequence
Length = 586
Score = 79.0 bits (166), Expect(2) = 1e-021
Identities = 31/41 (75%), Positives = 35/41 (85%)
Frame = +1 / -2
Query: 73 VESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
VE+G PNRI +CRSYPLYRFVREE+GT YLTGE+TRSP
Sbjct: 360 VENGTAAEPNRIVDCRSYPLYRFVREELGTVYLTGEKTRSP 238
Score = 43.2 bits (88), Expect(2) = 1e-021
Identities = 16/21 (76%), Positives = 18/21 (85%)
Frame = +1 / -2
Query: 247 IDPLLECLKEWNGAPLPLC*A 309
ID LLECLKEWNG PLP+ *+
Sbjct: 189 IDALLECLKEWNGEPLPIS*S 127
>gb|BI947758.1|BI947758 HVSMEl0006M12f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0006M12f, mRNA sequence
Length = 476
Score = 79.0 bits (166), Expect(2) = 1e-021
Identities = 31/41 (75%), Positives = 35/41 (85%)
Frame = +1 / +2
Query: 73 VESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
VE+G PNRI +CRSYPLYRFVREE+GT YLTGE+TRSP
Sbjct: 65 VENGTAAEPNRIVDCRSYPLYRFVREELGTVYLTGEKTRSP 187
Score = 43.2 bits (88), Expect(2) = 1e-021
Identities = 16/21 (76%), Positives = 18/21 (85%)
Frame = +1 / +2
Query: 247 IDPLLECLKEWNGAPLPLC*A 309
ID LLECLKEWNG PLP+ *+
Sbjct: 236 IDALLECLKEWNGEPLPIS*S 298
>gb|CA016735.1|CA016735 HV06I16u HV Hordeum vulgare subsp. vulgare cDNA clone HV06I16
3-PRIME, mRNA sequence
Length = 467
Score = 73.9 bits (155), Expect(2) = 1e-021
Identities = 28/32 (87%), Positives = 31/32 (96%)
Frame = +1 / -1
Query: 100 NRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
NRI ECRSYPLYRFVR+E+GTEYLTGE+TRSP
Sbjct: 452 NRITECRSYPLYRFVRKELGTEYLTGEKTRSP 357
Score = 48.3 bits (99), Expect(2) = 1e-021
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = +1 / -1
Query: 247 IDPLLECLKEWNGAPLPLC*AQ 312
ID LLECLKEWNG PLP+C* +
Sbjct: 308 IDALLECLKEWNGEPLPIC*TE 243
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 306,298,357
Number of Sequences: 312970
Number of extensions: 5352239
Number of successful extensions: 102649
Number of sequences better than 1.0e-020: 69
length of database: 58,378,179
effective HSP length: 51
effective length of database: 42,416,709
effective search space used: 6829090149
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)