TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 7297169.2.1
(545 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BU981676.1|BU981676 HA24E24r HA Hordeum vulgare subsp. v... 349 9e-096
gb|BG343471.1|BG343471 HVSMEg0005N16f Hordeum vulgare pre-a... 345 8e-095
gb|BQ759294.1|BQ759294 EBpi01_SQ004_H04_R pistil, 1 DPA, no... 317 3e-086
gb|BQ764007.1|BQ764007 EBro03_SQ006_C04_R root, 3 week, wat... 275 1e-073
gb|BE231139.2|BE231139 HVSMEg0017A06f Hordeum vulgare pre-a... 251 4e-069
gb|BI949989.1|BI949989 HVSMEl0017I12f Hordeum vulgare spike... 247 2e-065
gb|CA024578.1|CA024578 HZ49L07r HZ Hordeum vulgare subsp. v... 240 4e-063
gb|CA024760.1|CA024760 HZ50D16r HZ Hordeum vulgare subsp. v... 240 4e-063
gb|BU999476.1|BU999476 HI14K04r HI Hordeum vulgare subsp. v... 204 7e-063
gb|BQ470911.1|BQ470911 HX04G15r HX Hordeum vulgare subsp. v... 203 8e-061
gb|CA029600.1|CA029600 HZ65K21r HZ Hordeum vulgare subsp. v... 226 7e-059
gb|CK123808.1|CK123808 BES1824105g17 BES1824 Hordeum vulgar... 226 7e-059
gb|BI958844.1|BI958844 HVSMEn0016N11f Hordeum vulgare rachi... 222 1e-057
gb|BI778455.2|BI778455 EBro07_SQ003_F16_R root, 3 week, red... 187 2e-055
gb|CA023815.1|CA023815 HZ47H19r HZ Hordeum vulgare subsp. v... 200 4e-051
gb|BI956721.1|BI956721 HVSMEn0004P14f Hordeum vulgare rachi... 192 1e-048
gb|CA031998.1|CA031998 HX11L12r HX Hordeum vulgare subsp. v... 190 1e-048
gb|CA028647.1|CA028647 HZ62M08r HZ Hordeum vulgare subsp. v... 190 2e-048
gb|BQ661229.1|BQ661229 HM02I21u HM Hordeum vulgare subsp. v... 160 2e-045
gb|AL507406.1|AL507406 AL507406 Hordeum vulgare Barke devel... 160 3e-045
gb|CA001648.1|CA001648 HS05C24r HS Hordeum vulgare subsp. v... 178 5e-045
gb|CA023721.1|CA023721 HZ47D07r HZ Hordeum vulgare subsp. v... 150 1e-044
gb|BQ762483.1|BQ762483 EBro02_SQ004_B05_R root, 3 week, hyd... 160 2e-044
gb|CK123495.1|CK123495 BES1824104d10 BES1824 Hordeum vulgar... 153 5e-043
gb|CK123284.1|CK123284 BES1824103c21 BES1824 Hordeum vulgar... 153 5e-043
gb|BF260614.2|BF260614 HVSMEf0022H17f Hordeum vulgare seedl... 155 1e-042
gb|BM368109.2|BM368109 EBed01_SQ002_D08_R endosperm, 6 DPA,... 128 1e-042
gb|AL503449.1|AL503449 AL503449 Hordeum vulgare Barke roots... 152 9e-042
gb|BF253678.2|BF253678 HVSMEf0001N02f Hordeum vulgare seedl... 128 2e-041
gb|BE216378.3|BE216378 HV_CEb0010F10f Hordeum vulgare seedl... 129 3e-040
gb|CK124729.1|CK124729 BES1824110c21 BES1824 Hordeum vulgar... 153 2e-039
gb|BF630687.2|BF630687 HVSMEb0013B12f Hordeum vulgare seedl... 80 3e-038
gb|BI948566.1|BI948566 HVSMEl0010B14f Hordeum vulgare spike... 101 4e-037
gb|CV057084.1|CV057084 BNEL23h10 Barley EST endosperm libra... 118 2e-036
gb|BM817291.1|BM817291 HC108C06_SK.ab1 HC Hordeum vulgare s... 75 5e-035
gb|BU975896.1|BU975896 HB32K03r BC Hordeum vulgare subsp. v... 82 9e-034
gb|CV056929.1|CV056929 BNEL22b6 Barley EST endosperm librar... 82 1e-033
gb|BU966719.1|BU966719 HB02C09r BC Hordeum vulgare subsp. v... 82 1e-033
gb|BE454580.2|BE454580 HVSMEh0094F02f Hordeum vulgare 5-45 ... 84 8e-033
gb|BU979636.1|BU979636 HA16M15r HA Hordeum vulgare subsp. v... 82 1e-032
gb|BU996124.1|BU996124 HM12I06r HM Hordeum vulgare subsp. v... 67 2e-031
gb|BI949848.1|BI949848 HVSMEl0016H08f Hordeum vulgare spike... 80 3e-031
gb|BU976117.1|BU976117 HA03C18r HA Hordeum vulgare subsp. v... 112 6e-031
gb|AL504861.1|AL504861 AL504861 Hordeum vulgare Barke roots... 68 6e-029
gb|BU973406.1|BU973406 HB24N05r BC Hordeum vulgare subsp. v... 82 1e-028
gb|BU975588.1|BU975588 HB31K03r BC Hordeum vulgare subsp. v... 82 2e-027
gb|BJ447567.1|BJ447567 BJ447567 K. Sato unpublished cDNA li... 71 3e-027
gb|BQ759134.1|BQ759134 EBma07_SQ003_L21_R maternal, 21 DPA,... 77 3e-026
gb|CA026811.1|CA026811 HZ57A15r HZ Hordeum vulgare subsp. v... 117 6e-026
gb|BQ459843.1|BQ459843 HA07O13r HA Hordeum vulgare subsp. v... 94 4e-025
gb|BQ469305.1|BQ469305 HM04C01r HM Hordeum vulgare subsp. v... 79 2e-023
gb|BG345126.1|BG345126 HVSMEg0018M18f Hordeum vulgare pre-a... 76 8e-023
gb|BI950906.1|BI950906 HVSMEl0023J20f Hordeum vulgare spike... 72 1e-022
gb|BE602701.1|BE602701 HVSMEh0101E04f Hordeum vulgare 5-45 ... 103 6e-022
gb|BI956508.1|BI956508 HVSMEn0003N12f Hordeum vulgare rachi... 68 3e-021
gb|BQ753506.1|BQ753506 EBan01_SQ004_H09_R anther, yellow st... 85 3e-021
>gb|BU981676.1|BU981676 HA24E24r HA Hordeum vulgare subsp. vulgare cDNA clone HA24E24
5-PRIME, mRNA sequence
Length = 521
Score = 349 bits (760), Expect = 9e-096
Identities = 147/166 (88%), Positives = 154/166 (92%)
Frame = +1 / +2
Query: 37 GDKIRYYVQTDPSPTATIVFRGTVIGKSPSAPRVAAFSSRGPNYRAPEILKPDVIAPGVN 216
G +IR YV TDPSPTATIVF GTVIGKSPSAPRVAAFSSRGPNYRA EILKPDV APGVN
Sbjct: 2 GTRIRRYVTTDPSPTATIVFHGTVIGKSPSAPRVAAFSSRGPNYRATEILKPDVTAPGVN 181
Query: 217 ILAAWTGAASPTDLDIDSRRVEFNIISGTSMSCPHVSGLAALLRQAHPEWSPAAIKSALM 396
ILAAWTG ASPTDL+ID RRV FNIISGTSMSCPHVSGLAALLRQAHP+WSPAA+KSALM
Sbjct: 182 ILAAWTGEASPTDLEIDPRRVPFNIISGTSMSCPHVSGLAALLRQAHPDWSPAAVKSALM 361
Query: 397 TTAYNLDNSGETIKDLATGVESTPFVRGAGHVDPNAALDPRLVYDA 534
TTAYNLDNSGE IKDLATG +STPFVRGAGHVDPN+AL+P LVYDA
Sbjct: 362 TTAYNLDNSGEIIKDLATGSQSTPFVRGAGHVDPNSALNPGLVYDA 499
Score = 306 bits (667), Expect = 1e-083
Identities = 142/170 (83%), Positives = 147/170 (86%)
Frame = -1 / -3
Query: 545 SSEPASYTSLGSRAALGST*PAPRTNGVDSTPVARSLMVSPELSRLYAVVMSADLIAAGL 366
S+ ASYTS G A LGST PAPRTNGVD PVARSLM+SPELSRLYAVVMSADL AAGL
Sbjct: 510 SAVSASYTSPGLSALLGSTCPAPRTNGVDWLPVARSLMISPELSRLYAVVMSADLTAAGL 331
Query: 365 HSGCAWRSSAARPLTCGQDMDVPEMMLNSTRLESMSRSVGEAAPVHAASMLTPGAMTSGL 186
SGCA RSSAARPLTCG DMDVPEMMLN TRL S+SRSVGEA+PV AASMLTPGA+TSGL
Sbjct: 330 QSGCACRSSAARPLTCGHDMDVPEMMLNGTRLGSISRSVGEASPVQAASMLTPGAVTSGL 151
Query: 185 RISGAR*LGPRLENAATRGADGDLPMTVPRNTMVAVGDGSVWT*YLILSP 36
RIS AR*LGPRLENAATRGADGD PMTVP TMVAVGDGSV T* LIL P
Sbjct: 150 RISVAR*LGPRLENAATRGADGDFPMTVPWKTMVAVGDGSVVT*RLILVP 1
Score = 128 bits (275), Expect = 2e-029
Identities = 73/152 (48%), Positives = 78/152 (51%)
Frame = -3 / -2
Query: 540 GAGVVHQPWXXXXXXXXXXXXXXERRRLHARREVLDGFPGVVQVVXXXXXXXXXXRGAPL 361
G VVHQP ERRRL +VLD PGVVQVV RGAP+
Sbjct: 505 GVRVVHQPGVERAVGVHVPGAADERRRLAPGGQVLDDLPGVVQVVRRGHERRLDRRGAPV 326
Query: 360 RVRLAEQXXXXXXXXXXXXXXGDDVELHAPRVDVQVXXXXXXGPRREYVDARGDDVGLED 181
RVRL EQ GDDVE APRVD++V GP REYVDA G D+GLED
Sbjct: 325 RVRLPEQRGEAAHVRARHGRPGDDVERDAPRVDLKVGGGGLAGPGREYVDAGGCDIGLED 146
Query: 180 LRCAVVGASAXXXXXXXXXXRLADDCAAEHDG 85
LR AVVGA A RL DDCA E DG
Sbjct: 145 LRRAVVGAPARERRDARRRRRLPDDCAVEDDG 50
Score = 116 bits (250), Expect(4) = 2e-043
Identities = 47/66 (71%), Positives = 53/66 (80%)
Frame = +3 / +1
Query: 36 RRQDQVLRPDGPVANGDHRVPRHSHRQVAVGASSGGVLEPRPQLPRTGDPQARRHRPGRQ 215
R +DQ LR D PV +GDHR+PRHSHR+VAV A+ GVLEP PQLPR GDPQAR H P RQ
Sbjct: 1 RHEDQALRHDRPVPDGDHRLPRHSHREVAVCAARRGVLEPGPQLPRDGDPQARCHSPRRQ 180
Query: 216 HTRGVD 233
HTRG+D
Sbjct: 181 HTRGLD 198
Score = 60.8 bits (127), Expect(4) = 2e-043
Identities = 24/30 (80%), Positives = 25/30 (83%)
Frame = +3 / +1
Query: 381 QVGAHDHGVQPGQLRGNHQGPRDGRGVDAV 470
QVGAHDHGVQPGQLRG+HQGP VDAV
Sbjct: 346 QVGAHDHGVQPGQLRGDHQGPGHREPVDAV 435
Score = 31.2 bits (62), Expect(4) = 2e-043
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = +3 / +1
Query: 270 EARGVQHHLRHVHVL 314
EAR VQHHLR VHV+
Sbjct: 235 EARPVQHHLRDVHVV 279
Score = 21.6 bits (41), Expect(4) = 2e-043
Identities = 6/8 (75%), Positives = 6/8 (75%)
Frame = +2 / +3
Query: 518 GWCTTPAP 541
GWCTT P
Sbjct: 483 GWCTTRTP 506
>gb|BG343471.1|BG343471 HVSMEg0005N16f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0005N16f, mRNA sequence
Length = 915
Score = 345 bits (753), Expect = 8e-095
Identities = 146/163 (89%), Positives = 152/163 (93%)
Frame = +1 / +1
Query: 46 IRYYVQTDPSPTATIVFRGTVIGKSPSAPRVAAFSSRGPNYRAPEILKPDVIAPGVNILA 225
IR YV TDPSPTATIVF GTVIGKSPSAPRVAAFSSRGPNYRA EILKPDV APGVNILA
Sbjct: 1 IRRYVTTDPSPTATIVFHGTVIGKSPSAPRVAAFSSRGPNYRATEILKPDVTAPGVNILA 180
Query: 226 AWTGAASPTDLDIDSRRVEFNIISGTSMSCPHVSGLAALLRQAHPEWSPAAIKSALMTTA 405
AWTG ASPTDL+ID RRV FNIISGTSMSCPHVSGLAALLRQAHP+WSPAA+KSALMTTA
Sbjct: 181 AWTGEASPTDLEIDPRRVPFNIISGTSMSCPHVSGLAALLRQAHPDWSPAAVKSALMTTA 360
Query: 406 YNLDNSGETIKDLATGVESTPFVRGAGHVDPNAALDPRLVYDA 534
YNLDNSGE IKDLATG +STPFVRGAGHVDPN+AL+P LVYDA
Sbjct: 361 YNLDNSGEIIKDLATGSQSTPFVRGAGHVDPNSALNPGLVYDA 489
Score = 300 bits (654), Expect = 9e-082
Identities = 139/166 (83%), Positives = 144/166 (86%)
Frame = -1 / -2
Query: 545 SSEPASYTSLGSRAALGST*PAPRTNGVDSTPVARSLMVSPELSRLYAVVMSADLIAAGL 366
S+ ASYTS G A LGST PAPRTNGVD PVARSLM+SPELSRLYAVVMSADL AAGL
Sbjct: 500 SAVSASYTSPGLSALLGSTCPAPRTNGVDWLPVARSLMISPELSRLYAVVMSADLTAAGL 321
Query: 365 HSGCAWRSSAARPLTCGQDMDVPEMMLNSTRLESMSRSVGEAAPVHAASMLTPGAMTSGL 186
SGCA RSSAARPLTCG DMDVPEMMLN TRL S+SRSVGEA+PV AASMLTPGA+TSGL
Sbjct: 320 QSGCACRSSAARPLTCGHDMDVPEMMLNGTRLGSISRSVGEASPVQAASMLTPGAVTSGL 141
Query: 185 RISGAR*LGPRLENAATRGADGDLPMTVPRNTMVAVGDGSVWT*YL 48
RIS AR*LGPRLENAATRGADGD PMTVP TMVAVGDGSV T* L
Sbjct: 140 RISVAR*LGPRLENAATRGADGDFPMTVPWKTMVAVGDGSVVT*RL 3
Score = 128 bits (275), Expect = 2e-029
Identities = 73/152 (48%), Positives = 78/152 (51%)
Frame = -3 / -1
Query: 540 GAGVVHQPWXXXXXXXXXXXXXXERRRLHARREVLDGFPGVVQVVXXXXXXXXXXRGAPL 361
G VVHQP ERRRL +VLD PGVVQVV RGAP+
Sbjct: 495 GVRVVHQPGVERAVGVHVPGAADERRRLAPGGQVLDDLPGVVQVVRRGHERRLDRRGAPV 316
Query: 360 RVRLAEQXXXXXXXXXXXXXXGDDVELHAPRVDVQVXXXXXXGPRREYVDARGDDVGLED 181
RVRL EQ GDDVE APRVD++V GP REYVDA G D+GLED
Sbjct: 315 RVRLPEQRGEAAHVRARHGRPGDDVERDAPRVDLKVGGGGLAGPGREYVDAGGCDIGLED 136
Query: 180 LRCAVVGASAXXXXXXXXXXRLADDCAAEHDG 85
LR AVVGA A RL DDCA E DG
Sbjct: 135 LRRAVVGAPARERRDARRRRRLPDDCAVEDDG 40
Score = 110 bits (237), Expect(4) = 5e-041
Identities = 45/62 (72%), Positives = 50/62 (80%)
Frame = +3 / +3
Query: 48 QVLRPDGPVANGDHRVPRHSHRQVAVGASSGGVLEPRPQLPRTGDPQARRHRPGRQHTRG 227
Q LR D PV +GDHR+PRHSHR+VAV A+ GVLEP PQLPR GDPQAR H P RQHTRG
Sbjct: 3 QALRHDRPVPDGDHRLPRHSHREVAVCAARRGVLEPGPQLPRDGDPQARCHSPRRQHTRG 182
Query: 228 VD 233
+D
Sbjct: 183 LD 188
Score = 60.8 bits (127), Expect(4) = 5e-041
Identities = 24/30 (80%), Positives = 25/30 (83%)
Frame = +3 / +3
Query: 381 QVGAHDHGVQPGQLRGNHQGPRDGRGVDAV 470
QVGAHDHGVQPGQLRG+HQGP VDAV
Sbjct: 336 QVGAHDHGVQPGQLRGDHQGPGHREPVDAV 425
Score = 31.2 bits (62), Expect(4) = 5e-041
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = +3 / +3
Query: 270 EARGVQHHLRHVHVL 314
EAR VQHHLR VHV+
Sbjct: 225 EARPVQHHLRDVHVV 269
Score = 21.6 bits (41), Expect(4) = 5e-041
Identities = 6/8 (75%), Positives = 6/8 (75%)
Frame = +2 / +2
Query: 518 GWCTTPAP 541
GWCTT P
Sbjct: 473 GWCTTRTP 496
>gb|BQ759294.1|BQ759294 EBpi01_SQ004_H04_R pistil, 1 DPA, no treatment, cv Optic, EBpi01
Hordeum vulgare subsp. vulgare cDNA clone
EBpi01_SQ004_H04 5', mRNA sequence
Length = 444
Score = 317 bits (691), Expect = 3e-086
Identities = 133/148 (89%), Positives = 138/148 (93%)
Frame = +1 / +1
Query: 58 VQTDPSPTATIVFRGTVIGKSPSAPRVAAFSSRGPNYRAPEILKPDVIAPGVNILAAWTG 237
V TDPSPTATIVF GTVIGKSPSAPRVAAFSSRGPNYRA EILKPDV APGVNILAAWTG
Sbjct: 1 VTTDPSPTATIVFHGTVIGKSPSAPRVAAFSSRGPNYRAAEILKPDVTAPGVNILAAWTG 180
Query: 238 AASPTDLDIDSRRVEFNIISGTSMSCPHVSGLAALLRQAHPEWSPAAIKSALMTTAYNLD 417
ASPTDL+ID RRV FNIISGTSMSCPHVSGLAALLRQAHP+WSPA +KSALMTTAYNLD
Sbjct: 181 EASPTDLEIDPRRVPFNIISGTSMSCPHVSGLAALLRQAHPDWSPAEVKSALMTTAYNLD 360
Query: 418 NSGETIKDLATGVESTPFVRGAGHVDPN 501
NSGE IKDLATG ++TPFVRGAGHVDPN
Sbjct: 361 NSGEIIKDLATGSQTTPFVRGAGHVDPN 444
Score = 281 bits (611), Expect = 8e-076
Identities = 126/146 (86%), Positives = 131/146 (89%)
Frame = -1 / -2
Query: 500 LGST*PAPRTNGVDSTPVARSLMVSPELSRLYAVVMSADLIAAGLHSGCAWRSSAARPLT 321
LGST PAPRTNGV PVARSLM+SPELSRLYAVVMSADL +AGL SGCA RSSAARPLT
Sbjct: 443 LGSTCPAPRTNGVVWLPVARSLMISPELSRLYAVVMSADLTSAGLQSGCACRSSAARPLT 264
Query: 320 CGQDMDVPEMMLNSTRLESMSRSVGEAAPVHAASMLTPGAMTSGLRISGAR*LGPRLENA 141
CG DMDVPEMMLN TRL S+SRSVGEA+PV AASMLTPGA+TSGLRIS AR*LGPRLENA
Sbjct: 263 CGHDMDVPEMMLNGTRLGSISRSVGEASPVQAASMLTPGAVTSGLRISAAR*LGPRLENA 84
Query: 140 ATRGADGDLPMTVPRNTMVAVGDGSV 63
ATRGADGD PMTVP TMVAVGDGSV
Sbjct: 83 ATRGADGDFPMTVPWKTMVAVGDGSV 6
Score = 126 bits (271), Expect(2) = 3e-040
Identities = 54/84 (64%), Positives = 60/84 (71%)
Frame = +3 / +3
Query: 63 DGPVANGDHRVPRHSHRQVAVGASSGGVLEPRPQLPRTGDPQARRHRPGRQHTRGVDXXX 242
D PV +GDHR+PRHSHR+VAV A+ GVLEP PQLPR GDPQAR H P RQHTRG+D
Sbjct: 6 DRPVPDGDHRLPRHSHREVAVCAARRGVLEPGPQLPRGGDPQARCHSPRRQHTRGLDRRG 185
Query: 243 XXXXXXXXXEARGVQHHLRHVHVL 314
EAR VQHHLR VHV+
Sbjct: 186 LPHRPRDRPEARPVQHHLRDVHVV 257
Score = 120 bits (259), Expect = 3e-027
Identities = 66/128 (51%), Positives = 71/128 (55%)
Frame = -3 / -1
Query: 468 RRRLHARREVLDGFPGVVQVVXXXXXXXXXXRGAPLRVRLAEQXXXXXXXXXXXXXXGDD 289
RRRL +VLD PGVVQVV RGAP+RVRL EQ GDD
Sbjct: 411 RRRLAPGGQVLDDLPGVVQVVRRGHERRLDLRGAPVRVRLPEQRGEAAHVRARHGRPGDD 232
Query: 288 VELHAPRVDVQVXXXXXXGPRREYVDARGDDVGLEDLRCAVVGASAXXXXXXXXXXRLAD 109
VE APRVD++V GP REYVDA G D+GLEDLR AVVGA A RL D
Sbjct: 231 VERDAPRVDLEVGGGGLAGPGREYVDAGGCDIGLEDLRRAVVGAPARERRDARRRRRLPD 52
Query: 108 DCAAEHDG 85
DCA E DG
Sbjct: 51 DCAVEDDG 28
Score = 57.6 bits (120), Expect(2) = 3e-040
Identities = 23/30 (76%), Positives = 24/30 (80%)
Frame = +3 / +3
Query: 381 QVGAHDHGVQPGQLRGNHQGPRDGRGVDAV 470
QVGAHDHGVQPGQLRG+HQGP DAV
Sbjct: 324 QVGAHDHGVQPGQLRGDHQGPGHREPDDAV 413
>gb|BQ764007.1|BQ764007 EBro03_SQ006_C04_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ006_C04 5', mRNA sequence
Length = 438
Score = 275 bits (598), Expect = 1e-073
Identities = 111/142 (78%), Positives = 128/142 (90%)
Frame = +1 / +1
Query: 73 SPTATIVFRGTVIGKSPSAPRVAAFSSRGPNYRAPEILKPDVIAPGVNILAAWTGAASPT 252
SPTATI+FRGTV+G +P +PR+AAFSSRGPN RAPEI KPDV APGV+ILAAWTGA SPT
Sbjct: 13 SPTATIIFRGTVVGSTPPSPRMAAFSSRGPNLRAPEIFKPDVTAPGVDILAAWTGANSPT 192
Query: 253 DLDIDSRRVEFNIISGTSMSCPHVSGLAALLRQAHPEWSPAAIKSALMTTAYNLDNSGET 432
+LD D+RRV++NIISGTSMSCPHVSG+AALLRQA PEWSPAAIKSALMTTAYN+DN+G
Sbjct: 193 ELDSDTRRVKYNIISGTSMSCPHVSGIAALLRQARPEWSPAAIKSALMTTAYNVDNTGGV 372
Query: 433 IKDLATGVESTPFVRGAGHVDP 498
I D+++G STPF RGAGH+DP
Sbjct: 373 IGDMSSGDASTPFARGAGHIDP 438
Score = 211 bits (458), Expect = 1e-054
Identities = 98/142 (69%), Positives = 108/142 (76%)
Frame = -1 / -2
Query: 497 GST*PAPRTNGVDSTPVARSLMVSPELSRLYAVVMSADLIAAGLHSGCAWRSSAARPLTC 318
GS PAPR NGVD++P+ S M P LS LYAVV+SADLIAAGLHSG A RSSAA PLTC
Sbjct: 437 GSMCPAPRANGVDASPLDMSPMTPPVLSTLYAVVISADLIAAGLHSGLACRSSAAMPLTC 258
Query: 317 GQDMDVPEMMLNSTRLESMSRSVGEAAPVHAASMLTPGAMTSGLRISGAR*LGPRLENAA 138
G DMDVP+MML TRL S+S SVGE APV AA M TPGA+TSGL+ISGAR GPRLE AA
Sbjct: 257 GHDMDVPDMMLYFTRLVSLSSSVGELAPVQAARMSTPGAVTSGLKISGARKFGPRLEKAA 78
Query: 137 TRGADGDLPMTVPRNTMVAVGD 72
G G P TVPR +VAVG+
Sbjct: 77 ILGEGGVEPTTVPRKMIVAVGE 12
>gb|BE231139.2|BE231139 HVSMEg0017A06f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0017A06f, mRNA sequence
Length = 904
Score = 251 bits (545), Expect(2) = 4e-069
Identities = 106/120 (88%), Positives = 109/120 (90%)
Frame = +1 / +1
Query: 1 HLVPATMVGQKFGDKIRYYVQTDPSPTATIVFRGTVIGKSPSAPRVAAFSSRGPNYRAPE 180
HL+PATMVGQKFGDKIR YV TDPSPTATIVF GTVIGKSPSAPRVAAFSSRGPNYRA E
Sbjct: 190 HLIPATMVGQKFGDKIRRYVTTDPSPTATIVFHGTVIGKSPSAPRVAAFSSRGPNYRATE 369
Query: 181 ILKPDVIAPGVNILAAWTGAASPTDLDIDSRRVEFNIISGTSMSCPHVSGLAALLRQAHP 360
ILKPDV APGVNILAAWTG ASPTDL+ID RRV FNIISGT MSC HVSGLAAL R+AHP
Sbjct: 370 ILKPDVTAPGVNILAAWTGEASPTDLEIDPRRVPFNIISGTFMSCQHVSGLAALFREAHP 549
Score = 222 bits (483), Expect(2) = 8e-062
Identities = 100/119 (84%), Positives = 105/119 (88%)
Frame = -1 / -3
Query: 359 GCAWRSSAARPLTCGQDMDVPEMMLNSTRLESMSRSVGEAAPVHAASMLTPGAMTSGLRI 180
GCA R+SAA PLTC DM+VPEMMLN TRL S+SRSVGEA+PV AASMLTPGA+TSGLRI
Sbjct: 548 GCASRNSAASPLTCWHDMNVPEMMLNGTRLGSISRSVGEASPVQAASMLTPGAVTSGLRI 369
Query: 179 SGAR*LGPRLENAATRGADGDLPMTVPRNTMVAVGDGSVWT*YLILSPNFCPTIVAGTR 3
S AR*LGPRLENAATRGADGD PMTVP TMVAVGDGSV T* LILSPNFCPTIVAG R
Sbjct: 368 SVAR*LGPRLENAATRGADGDFPMTVPWKTMVAVGDGSVVT*RLILSPNFCPTIVAGMR 192
Score = 131 bits (283), Expect(3) = 9e-037
Identities = 55/77 (71%), Positives = 59/77 (76%)
Frame = +3 / +3
Query: 3 PRAGDYGRAEVRRQDQVLRPDGPVANGDHRVPRHSHRQVAVGASSGGVLEPRPQLPRTGD 182
P D G AEVRRQDQ LR D PV +GDHR PRHSHR+VAV A+ GVLEP PQLPR GD
Sbjct: 192 PHPSDNGGAEVRRQDQALRHDRPVPDGDHRFPRHSHREVAVCAARRGVLEPGPQLPRDGD 371
Query: 183 PQARRHRPGRQHTRGVD 233
PQAR H P RQHTRG+D
Sbjct: 372 PQARCHSPRRQHTRGLD 422
Score = 104 bits (222), Expect = 4e-022
Identities = 59/127 (46%), Positives = 68/127 (53%)
Frame = -3 / -2
Query: 465 RRLHARREVLDGFPGVVQVVXXXXXXXXXXRGAPLRVRLAEQXXXXXXXXXXXXXXGDDV 286
R + +R +VL+ PGVVQVV G RVRL +Q GDDV
Sbjct: 654 RLMCSRWQVLNILPGVVQVVPRVMSPYLTPAGFQSRVRLPKQRGEPAHVLARHERPGDDV 475
Query: 285 ELHAPRVDVQVXXXXXXGPRREYVDARGDDVGLEDLRCAVVGASAXXXXXXXXXXRLADD 106
E APRVD++V GP REYVDA G D+GLEDLR AVVGA A RL DD
Sbjct: 474 ERDAPRVDLKVGGGGLAGPGREYVDAGGCDIGLEDLRRAVVGAPARERRDARRRRRLPDD 295
Query: 105 CAAEHDG 85
CA E+DG
Sbjct: 294 CAVENDG 274
Score = 32.5 bits (65), Expect(2) = 8e-062
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = -2 / -1
Query: 451 PSRGP*WFPRSCPGC 407
P GP*+ PRSCPGC
Sbjct: 640 PVAGP*YSPRSCPGC 596
Score = 31.2 bits (62), Expect(3) = 9e-037
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = +3 / +3
Query: 270 EARGVQHHLRHVHVL 314
EAR VQHHLR VHV+
Sbjct: 459 EARPVQHHLRDVHVV 503
Score = 30.3 bits (60), Expect(2) = 4e-069
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = +1 / +1
Query: 409 NLDNSGETIKDLATG 453
NLDNSGE IKDL G
Sbjct: 598 NLDNSGENIKDLPPG 642
Score = 27.1 bits (53), Expect(3) = 9e-037
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +3 / +3
Query: 408 QPGQLRGNHQGPRDG 452
QPGQLRG + GP G
Sbjct: 597 QPGQLRGEY*GPATG 641
>gb|BI949989.1|BI949989 HVSMEl0017I12f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0017I12f, mRNA sequence
Length = 450
Score = 248 bits (538), Expect = 2e-065
Identities = 106/128 (82%), Positives = 113/128 (88%)
Frame = +1 / +1
Query: 4 LVPATMVGQKFGDKIRYYVQTDPSPTATIVFRGTVIGKSPSAPRVAAFSSRGPNYRAPEI 183
L T+VGQ FG+KIR YV T+PSPTATIVF GTVIGKSPSAPRVAAFSSRGPNYRA EI
Sbjct: 67 LFQRTLVGQNFGNKIRPYVTTNPSPTATIVFHGTVIGKSPSAPRVAAFSSRGPNYRATEI 246
Query: 184 LKPDVIAPGVNILAAWTGAASPTDLDIDSRRVEFNIISGTSMSCPHVSGLAALLRQAHPE 363
LKPDV APGVNILAA TG ASPTDL+ID RRV FNIISGTSMSCPHVSGL ALLRQAHP+
Sbjct: 247 LKPDVTAPGVNILAA*TGEASPTDLEIDPRRVPFNIISGTSMSCPHVSGLPALLRQAHPD 426
Query: 364 WSPAAIKS 387
W+P A+KS
Sbjct: 427 WNPPAVKS 450
Score = 218 bits (474), Expect = 6e-057
Identities = 100/124 (80%), Positives = 103/124 (83%)
Frame = -1 / -2
Query: 386 DLIAAGLHSGCAWRSSAARPLTCGQDMDVPEMMLNSTRLESMSRSVGEAAPVHAASMLTP 207
DL A G SGCA RSSA RPLTCG DMDVPEMMLN TRL S+SRSVGEA+PV AASMLTP
Sbjct: 449 DLTAGGFQSGCACRSSAGRPLTCGHDMDVPEMMLNGTRLGSISRSVGEASPVQAASMLTP 270
Query: 206 GAMTSGLRISGAR*LGPRLENAATRGADGDLPMTVPRNTMVAVGDGSVWT*YLILSPNFC 27
GA+TSGLRIS AR*LGPRLENAATRGADGD PMTVP TMVAVGDG V T* LIL P F
Sbjct: 269 GAVTSGLRISVAR*LGPRLENAATRGADGDFPMTVPWKTMVAVGDGFVVT*GLILFPKFW 90
Query: 26 PTIV 15
PT V
Sbjct: 89 PTNV 78
Score = 114 bits (246), Expect(2) = 5e-029
Identities = 47/71 (66%), Positives = 55/71 (77%)
Frame = +3 / +3
Query: 21 GRAEVRRQDQVLRPDGPVANGDHRVPRHSHRQVAVGASSGGVLEPRPQLPRTGDPQARRH 200
G + R Q+Q LR D PV +GDHR+PRHSHR+VAV A+ GVLEP PQLPR GDPQAR H
Sbjct: 84 GGPKFREQNQALRHDKPVPDGDHRLPRHSHREVAVCAARRGVLEPGPQLPRDGDPQARCH 263
Query: 201 RPGRQHTRGVD 233
P RQHTRG++
Sbjct: 264 SPRRQHTRGLN 296
Score = 31.2 bits (62), Expect(2) = 5e-029
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = +3 / +3
Query: 270 EARGVQHHLRHVHVL 314
EAR VQHHLR VHV+
Sbjct: 333 EARPVQHHLRDVHVV 377
>gb|CA024578.1|CA024578 HZ49L07r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ49L07
5-PRIME, mRNA sequence
Length = 526
Score = 240 bits (522), Expect = 4e-063
Identities = 100/113 (88%), Positives = 106/113 (93%)
Frame = +1 / +2
Query: 196 VIAPGVNILAAWTGAASPTDLDIDSRRVEFNIISGTSMSCPHVSGLAALLRQAHPEWSPA 375
V APGVNILAAWTG ASPTDL+ID RRV FNIISGTSMSCPHVSGLAALLRQAHP+WSPA
Sbjct: 11 VTAPGVNILAAWTGEASPTDLEIDPRRVPFNIISGTSMSCPHVSGLAALLRQAHPDWSPA 190
Query: 376 AIKSALMTTAYNLDNSGETIKDLATGVESTPFVRGAGHVDPNAALDPRLVYDA 534
A+KSALMTTAYNLDNSGE IKDLATG +STPFVRGAGHVDPN+AL+P LVYDA
Sbjct: 191 AVKSALMTTAYNLDNSGEIIKDLATGSQSTPFVRGAGHVDPNSALNPGLVYDA 349
Score = 212 bits (459), Expect = 7e-055
Identities = 96/117 (82%), Positives = 101/117 (86%)
Frame = -1 / -2
Query: 545 SSEPASYTSLGSRAALGST*PAPRTNGVDSTPVARSLMVSPELSRLYAVVMSADLIAAGL 366
S+ ASYTS G A LGST PAPRTNGVD PVARSLM+SPELSRLYAVVMSADL AAGL
Sbjct: 360 SAVSASYTSPGLSALLGSTCPAPRTNGVDWLPVARSLMISPELSRLYAVVMSADLTAAGL 181
Query: 365 HSGCAWRSSAARPLTCGQDMDVPEMMLNSTRLESMSRSVGEAAPVHAASMLTPGAMT 195
SGCA RSSAARPLTCG DMDVPEMMLN TRL S+SRSVGEA+PV AASMLTPGA+T
Sbjct: 180 QSGCACRSSAARPLTCGHDMDVPEMMLNGTRLGSISRSVGEASPVQAASMLTPGAVT 10
>gb|CA024760.1|CA024760 HZ50D16r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ50D16
5-PRIME, mRNA sequence
Length = 572
Score = 240 bits (522), Expect = 4e-063
Identities = 100/113 (88%), Positives = 106/113 (93%)
Frame = +1 / +2
Query: 196 VIAPGVNILAAWTGAASPTDLDIDSRRVEFNIISGTSMSCPHVSGLAALLRQAHPEWSPA 375
V APGVNILAAWTG ASPTDL+ID RRV FNIISGTSMSCPHVSGLAALLRQAHP+WSPA
Sbjct: 11 VTAPGVNILAAWTGEASPTDLEIDPRRVPFNIISGTSMSCPHVSGLAALLRQAHPDWSPA 190
Query: 376 AIKSALMTTAYNLDNSGETIKDLATGVESTPFVRGAGHVDPNAALDPRLVYDA 534
A+KSALMTTAYNLDNSGE IKDLATG +STPFVRGAGHVDPN+AL+P LVYDA
Sbjct: 191 AVKSALMTTAYNLDNSGEIIKDLATGSQSTPFVRGAGHVDPNSALNPGLVYDA 349
Score = 212 bits (459), Expect = 7e-055
Identities = 96/117 (82%), Positives = 101/117 (86%)
Frame = -1 / -3
Query: 545 SSEPASYTSLGSRAALGST*PAPRTNGVDSTPVARSLMVSPELSRLYAVVMSADLIAAGL 366
S+ ASYTS G A LGST PAPRTNGVD PVARSLM+SPELSRLYAVVMSADL AAGL
Sbjct: 360 SAVSASYTSPGLSALLGSTCPAPRTNGVDWLPVARSLMISPELSRLYAVVMSADLTAAGL 181
Query: 365 HSGCAWRSSAARPLTCGQDMDVPEMMLNSTRLESMSRSVGEAAPVHAASMLTPGAMT 195
SGCA RSSAARPLTCG DMDVPEMMLN TRL S+SRSVGEA+PV AASMLTPGA+T
Sbjct: 180 QSGCACRSSAARPLTCGHDMDVPEMMLNGTRLGSISRSVGEASPVQAASMLTPGAVT 10
>gb|BU999476.1|BU999476 HI14K04r HI Hordeum vulgare subsp. vulgare cDNA clone HI14K04
5-PRIME, mRNA sequence
Length = 569
Score = 204 bits (442), Expect(2) = 7e-063
Identities = 86/130 (66%), Positives = 102/130 (78%)
Frame = +1 / +2
Query: 127 APRVAAFSSRGPNYRAPEILKPDVIAPGVNILAAWTGAASPTDLDIDSRRVEFNIISGTS 306
+P VAAFSSRGPN P ILKPD+IAPGVNILAAW+G+ P+ + D RR FNIISGTS
Sbjct: 179 SPVVAAFSSRGPNTVTPGILKPDLIAPGVNILAAWSGSVGPSGIADDHRRTSFNIISGTS 358
Query: 307 MSCPHVSGLAALLRQAHPEWSPAAIKSALMTTAYNLDNSGETIKDLATGVESTPFVRGAG 486
MSCPHVSGLAA LR AH +WSPAAI+SALMTTAY +G+ + D+AT + +TP GAG
Sbjct: 359 MSCPHVSGLAAFLRSAHQDWSPAAIRSALMTTAYAAYPNGDGLLDVATELAATPLDMGAG 538
Query: 487 HVDPNAALDP 516
HVDP+ A+DP
Sbjct: 539 HVDPSKAVDP 568
Score = 141 bits (305), Expect(2) = 5e-040
Identities = 71/129 (55%), Positives = 82/129 (63%)
Frame = -1 / -3
Query: 515 GSRAALGST*PAPRTNGVDSTPVARSLMVSPELSRLYAVVMSADLIAAGLHSGCAWRSSA 336
GS A LGST PAP ++GV ++ VA S SP YAVV+SAD +AAGL S CA R +A
Sbjct: 567 GSTALLGSTCPAPMSSGVAASSVATSRRPSPLGYAAYAVVISADRMAAGLQSWCAERRNA 388
Query: 335 ARPLTCGQDMDVPEMMLNSTRLESMSRSVGEAAPVHAASMLTPGAMTSGLRISGAR*LGP 156
A PLTCG DMDVP+MML R S + G P HAA M TPGA+ SGLR+ G GP
Sbjct: 387 ASPLTCGHDMDVPDMMLKLVRRWSSAIPDGPTDPDHAARMFTPGAIRSGLRMPGVTVFGP 208
Query: 155 RLENAATRG 129
E AAT G
Sbjct: 207 LDEKAATTG 181
Score = 56.2 bits (117), Expect(2) = 7e-063
Identities = 21/42 (50%), Positives = 28/42 (66%)
Frame = +1 / +2
Query: 1 HLVPATMVGQKFGDKIRYYVQTDPSPTATIVFRGTVIGKSPS 126
H++P VG+K G+ +R Y +DP PTA IVF GT +G PS
Sbjct: 56 HILPGAGVGEKAGNAMRTYASSDPKPTANIVFAGTKVGVQPS 181
Score = 41.2 bits (84), Expect(2) = 5e-040
Identities = 22/48 (45%), Positives = 25/48 (52%)
Frame = -1 / -3
Query: 152 LENAATRGADGDLPMTVPRNTMVAVGDGSVWT*YLILSPNFCPTIVAG 9
L+ A DG P VP NTM+AVG GS * L+ P F PT G
Sbjct: 207 LDEKAATTGDGWTPTFVPANTMLAVGFGSDDA*VLMALPAFSPTPAPG 64
>gb|BQ470911.1|BQ470911 HX04G15r HX Hordeum vulgare subsp. vulgare cDNA clone HX04G15
5-PRIME, mRNA sequence
Length = 545
Score = 203 bits (441), Expect(2) = 8e-061
Identities = 84/123 (68%), Positives = 96/123 (78%)
Frame = +1 / +1
Query: 127 APRVAAFSSRGPNYRAPEILKPDVIAPGVNILAAWTGAASPTDLDIDSRRVEFNIISGTS 306
+P VAAFSSRGPN P+ILKPD+I PGVNILA W+G PT L DSRR FNIISGTS
Sbjct: 175 SPVVAAFSSRGPNTVVPDILKPDMIGPGVNILAGWSGVKGPTGLAKDSRRTSFNIISGTS 354
Query: 307 MSCPHVSGLAALLRQAHPEWSPAAIKSALMTTAYNLDNSGETIKDLATGVESTPFVRGAG 486
MSCPH+SGLAALL+ AHP WSPAAIKSALMTT Y +DN+ +++D A +TPF GAG
Sbjct: 355 MSCPHISGLAALLKAAHPNWSPAAIKSALMTTTYTMDNTNSSLRDAAGSSPATPFGFGAG 534
Query: 487 HVD 495
HVD
Sbjct: 535 HVD 543
Score = 139 bits (299), Expect(2) = 6e-039
Identities = 68/123 (55%), Positives = 77/123 (62%)
Frame = -1 / -1
Query: 497 GST*PAPRTNGVDSTPVARSLMVSPELSRLYAVVMSADLIAAGLHSGCAWRSSAARPLTC 318
GST PAP+ NGV A S LS +Y VV+SADL+AAGL GCA SSAA PL C
Sbjct: 545 GSTWPAPKPNGVAGELPAASRSEELVLSMVYVVVISADLMAAGLQFGCAALSSAASPLMC 366
Query: 317 GQDMDVPEMMLNSTRLESMSRSVGEAAPVHAASMLTPGAMTSGLRISGAR*LGPRLENAA 138
G D+DVPEMML R S++ VG P H A M TPG + SG R+SG LGPR NAA
Sbjct: 365 GHDIDVPEMMLKLVRRLSLASPVGPLTPDHPARMFTPGPIMSGFRMSGTTVLGPRELNAA 186
Query: 137 TRG 129
T G
Sbjct: 185 TTG 177
Score = 49.8 bits (103), Expect(2) = 8e-061
Identities = 21/42 (50%), Positives = 26/42 (61%)
Frame = +1 / +1
Query: 1 HLVPATMVGQKFGDKIRYYVQTDPSPTATIVFRGTVIGKSPS 126
HL+PA VG+ GDKIR Y Q+ P A + F GT +G PS
Sbjct: 52 HLLPAVAVGKSTGDKIRDYAQSGGRPMAMLSFGGTALGIRPS 177
Score = 40.3 bits (82), Expect(2) = 6e-039
Identities = 19/46 (41%), Positives = 23/46 (50%)
Frame = -1 / -1
Query: 140 ATRGADGDLPMTVPRNTMVAVGDGSVWT*YLILSPNFCPTIVAGTR 3
A DG +P VP +A+G +W * ILSP PT AG R
Sbjct: 191 AATTGDGRMPRAVPPKLSIAIGRPPLWA*SRILSPVDFPTATAGRR 54
>gb|CA029600.1|CA029600 HZ65K21r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ65K21
5-PRIME, mRNA sequence
Length = 550
Score = 226 bits (491), Expect = 7e-059
Identities = 96/139 (69%), Positives = 110/139 (79%)
Frame = +1 / +3
Query: 127 APRVAAFSSRGPNYRAPEILKPDVIAPGVNILAAWTGAASPTDLDIDSRRVEFNIISGTS 306
+P VAAFSSRGPNY EILKPD+IAPGVNILAAW+G ASP+ L D RRV FNI+SGTS
Sbjct: 39 SPVVAAFSSRGPNYLTLEILKPDLIAPGVNILAAWSGDASPSSLASDRRRVGFNILSGTS 218
Query: 307 MSCPHVSGLAALLRQAHPEWSPAAIKSALMTTAYNLDNSGETIKDLATGVESTPFVRGAG 486
MSCPHV+G+AALL+ +HP+WSPA IKSALMTTAY DN+ +KD ATG STPF GAG
Sbjct: 219 MSCPHVAGVAALLKASHPDWSPAQIKSALMTTAYVHDNTYHVLKDAATGEASTPFEHGAG 398
Query: 487 HVDPNAALDPRLVYDAGSD 543
H+ P AL P LVYD G +
Sbjct: 399 HIHPVRALSPGLVYDIGQN 455
Score = 162 bits (351), Expect = 6e-040
Identities = 82/136 (60%), Positives = 90/136 (66%)
Frame = -1 / -1
Query: 536 PASYTSLGSRAALGST*PAPRTNGVDSTPVARSLMVSPELSRLYAVVMSADLIAAGLHSG 357
P S T G A G PAP +NGVD++PVA S LS AVVMSADLI AGL SG
Sbjct: 448 PMS*TRPGLSARTGCMWPAPCSNGVDASPVAASFSTW*VLSWT*AVVMSADLICAGLQSG 269
Query: 356 CAWRSSAARPLTCGQDMDVPEMMLNSTRLESMSRSVGEAAPVHAASMLTPGAMTSGLRIS 177
SSAA P TCG DMDVP+ MLN TR S++R G A+P+HAA M TPGAM SGLRIS
Sbjct: 268 WLALSSAATPATCGHDMDVPDRMLNPTRRRSLARLDGLASPLHAARMFTPGAMRSGLRIS 89
Query: 176 GAR*LGPRLENAATRG 129
R* GPR ENAAT G
Sbjct: 88 RVR*FGPREENAATTG 41
>gb|CK123808.1|CK123808 BES1824105g17 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010G175 5-PRIME, mRNA sequence
Length = 782
Score = 226 bits (491), Expect = 7e-059
Identities = 96/139 (69%), Positives = 110/139 (79%)
Frame = +1 / +1
Query: 127 APRVAAFSSRGPNYRAPEILKPDVIAPGVNILAAWTGAASPTDLDIDSRRVEFNIISGTS 306
+P VAAFSSRGPNY EILKPD+IAPGVNILAAW+G ASP+ L D RRV FNI+SGTS
Sbjct: 52 SPVVAAFSSRGPNYLTLEILKPDLIAPGVNILAAWSGDASPSSLASDRRRVGFNILSGTS 231
Query: 307 MSCPHVSGLAALLRQAHPEWSPAAIKSALMTTAYNLDNSGETIKDLATGVESTPFVRGAG 486
MSCPHV+G+AALL+ +HP+WSPA IKSALMTTAY DN+ +KD ATG STPF GAG
Sbjct: 232 MSCPHVAGVAALLKASHPDWSPAQIKSALMTTAYVHDNTYHVLKDAATGEASTPFEHGAG 411
Query: 487 HVDPNAALDPRLVYDAGSD 543
H+ P AL P LVYD G +
Sbjct: 412 HIHPVRALSPGLVYDIGQN 468
Score = 162 bits (351), Expect = 6e-040
Identities = 82/136 (60%), Positives = 90/136 (66%)
Frame = -1 / -1
Query: 536 PASYTSLGSRAALGST*PAPRTNGVDSTPVARSLMVSPELSRLYAVVMSADLIAAGLHSG 357
P S T G A G PAP +NGVD++PVA S LS AVVMSADLI AGL SG
Sbjct: 461 PMS*TRPGLSARTGCMWPAPCSNGVDASPVAASFSTW*VLSWT*AVVMSADLICAGLQSG 282
Query: 356 CAWRSSAARPLTCGQDMDVPEMMLNSTRLESMSRSVGEAAPVHAASMLTPGAMTSGLRIS 177
SSAA P TCG DMDVP+ MLN TR S++R G A+P+HAA M TPGAM SGLRIS
Sbjct: 281 WLALSSAATPATCGHDMDVPDRMLNPTRRRSLARLDGLASPLHAARMFTPGAMRSGLRIS 102
Query: 176 GAR*LGPRLENAATRG 129
R* GPR ENAAT G
Sbjct: 101 RVR*FGPREENAATTG 54
>gb|BI958844.1|BI958844 HVSMEn0016N11f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0016N11f, mRNA sequence
Length = 658
Score = 222 bits (482), Expect = 1e-057
Identities = 92/139 (66%), Positives = 106/139 (76%)
Frame = +1 / +1
Query: 127 APRVAAFSSRGPNYRAPEILKPDVIAPGVNILAAWTGAASPTDLDIDSRRVEFNIISGTS 306
+P VAAFSSRGPN P+ILKPD+I PGVNILA W+G PT L DSRR FNIISGTS
Sbjct: 28 SPVVAAFSSRGPNTVVPDILKPDMIGPGVNILAGWSGVKGPTGLAKDSRRTSFNIISGTS 207
Query: 307 MSCPHVSGLAALLRQAHPEWSPAAIKSALMTTAYNLDNSGETIKDLATGVESTPFVRGAG 486
MSCPH+SGLAALL+ AHP WSPAAIKSALMTT Y +DN+ +++D A +TPF GAG
Sbjct: 208 MSCPHISGLAALLKAAHPNWSPAAIKSALMTTTYTMDNTNSSLRDAAGSSPATPFGFGAG 387
Query: 487 HVDPNAALDPRLVYDAGSD 543
HVDP AL P LVYD ++
Sbjct: 388 HVDPQKALSPGLVYDISTN 444
Score = 147 bits (317), Expect = 3e-035
Identities = 73/134 (54%), Positives = 82/134 (61%)
Frame = -1 / -3
Query: 530 SYTSLGSRAALGST*PAPRTNGVDSTPVARSLMVSPELSRLYAVVMSADLIAAGLHSGCA 351
SYT G A GST PAP+ NGV A S LS +Y VV+SADL+AAGL GCA
Sbjct: 431 SYTRPGESAFCGSTWPAPKPNGVAGELPAASRSEELVLSMVYVVVISADLMAAGLQFGCA 252
Query: 350 WRSSAARPLTCGQDMDVPEMMLNSTRLESMSRSVGEAAPVHAASMLTPGAMTSGLRISGA 171
SSAA PL CG D+DVPEMML R S++ VG P H A M TPG + SG R+SG
Sbjct: 251 ALSSAASPLMCGHDIDVPEMMLKLVRRLSLASPVGPLTPDHPARMFTPGPIMSGFRMSGT 72
Query: 170 R*LGPRLENAATRG 129
LGPR NAAT G
Sbjct: 71 TVLGPRELNAATTG 30
>gb|BI778455.2|BI778455 EBro07_SQ003_F16_R root, 3 week, reduced light, cv Optic, EBro07
Hordeum vulgare subsp. vulgare cDNA clone
EBro07_SQ003_F16 5', mRNA sequence
Length = 588
Score = 187 bits (405), Expect(2) = 2e-055
Identities = 78/100 (78%), Positives = 84/100 (84%)
Frame = +1 / +1
Query: 127 APRVAAFSSRGPNYRAPEILKPDVIAPGVNILAAWTGAASPTDLDIDSRRVEFNIISGTS 306
+P VAAFSSRGPN PEILKPD+I PGVNILAAWTG A PT L D+RRV FNIISGTS
Sbjct: 289 SPLVAAFSSRGPNMITPEILKPDIIGPGVNILAAWTGKAGPTGLAADTRRVSFNIISGTS 468
Query: 307 MSCPHVSGLAALLRQAHPEWSPAAIKSALMTTAYNLDNSG 426
MSCPHVSGLAALLR AHPEWSPAA++SALMTTAY+ G
Sbjct: 469 MSCPHVSGLAALLRSAHPEWSPAAVRSALMTTAYSTYTGG 588
Score = 150 bits (325), Expect(2) = 2e-039
Identities = 69/92 (75%), Positives = 71/92 (77%)
Frame = -1 / -2
Query: 404 AVVMSADLIAAGLHSGCAWRSSAARPLTCGQDMDVPEMMLNSTRLESMSRSVGEAAPVHA 225
AVVMSA+ AAGLHSGCA RSSAARPLTCG DMDVPEMML TR S +R VG A PVHA
Sbjct: 566 AVVMSAERTAAGLHSGCALRSSAARPLTCGHDMDVPEMMLKLTRRVSAARPVGPALPVHA 387
Query: 224 ASMLTPGAMTSGLRISGAR*LGPRLENAATRG 129
A MLTPG M SGLRISG GPR ENAAT G
Sbjct: 386 ARMLTPGPMMSGLRISGVIMFGPRDENAATNG 291
Score = 48.0 bits (99), Expect(2) = 2e-055
Identities = 20/42 (47%), Positives = 26/42 (61%)
Frame = +1 / +1
Query: 1 HLVPATMVGQKFGDKIRYYVQTDPSPTATIVFRGTVIGKSPS 126
HL+PA VG+K G I+ Y+ + PTATIV GT + PS
Sbjct: 166 HLLPAAGVGEKEGSAIKSYIASAAKPTATIVIAGTQVNVRPS 291
Score = 30.3 bits (60), Expect(2) = 2e-039
Identities = 18/46 (39%), Positives = 22/46 (47%)
Frame = -1 / -2
Query: 140 ATRGADGDLPMTVPRNTMVAVGDGSVWT*YLILSPNFCPTIVAGTR 3
A +G VP T+VAVG + * I P+F PT AG R
Sbjct: 305 AATNGEGRTFTCVPAITIVAVGLAADAM*DFIAEPSFSPTPAAGRR 168
>gb|CA023815.1|CA023815 HZ47H19r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ47H19
5-PRIME, mRNA sequence
Length = 473
Score = 200 bits (434), Expect = 4e-051
Identities = 84/122 (68%), Positives = 97/122 (79%)
Frame = +1 / +2
Query: 178 EILKPDVIAPGVNILAAWTGAASPTDLDIDSRRVEFNIISGTSMSCPHVSGLAALLRQAH 357
EILKPD+IAPGVNILAAW+G ASP+ L D RRV FNI+SGTSMSCPHV+G+AALL+ +H
Sbjct: 8 EILKPDLIAPGVNILAAWSGDASPSSLASDRRRVGFNILSGTSMSCPHVAGVAALLKASH 187
Query: 358 PEWSPAAIKSALMTTAYNLDNSGETIKDLATGVESTPFVRGAGHVDPNAALDPRLVYDAG 537
P+WSPA IKSALMTTAY DN+ +KD ATG STPF GAGH+ P AL P LVYD G
Sbjct: 188 PDWSPAQIKSALMTTAYVHDNTYHVLKDAATGEASTPFEHGAGHIHPVRALSPGLVYDIG 367
Query: 538 SD 543
+
Sbjct: 368 QN 373
Score = 140 bits (303), Expect = 2e-033
Identities = 71/120 (59%), Positives = 79/120 (65%)
Frame = -1 / -3
Query: 536 PASYTSLGSRAALGST*PAPRTNGVDSTPVARSLMVSPELSRLYAVVMSADLIAAGLHSG 357
P S T G A G PAP +NGVD++PVA S LS AVVMSADLI AGL SG
Sbjct: 366 PMS*TRPGLSARTGCMWPAPCSNGVDASPVAASFSTW*VLSWT*AVVMSADLICAGLQSG 187
Query: 356 CAWRSSAARPLTCGQDMDVPEMMLNSTRLESMSRSVGEAAPVHAASMLTPGAMTSGLRIS 177
SSAA P TCG DMDVP+ MLN TR S++R G A+P+HAA M TPGAM SGLRIS
Sbjct: 186 WLALSSAATPATCGHDMDVPDRMLNPTRRRSLARLDGLASPLHAARMFTPGAMRSGLRIS 7
>gb|BI956721.1|BI956721 HVSMEn0004P14f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0004P14f, mRNA sequence
Length = 820
Score = 192 bits (417), Expect = 1e-048
Identities = 81/98 (82%), Positives = 88/98 (89%)
Frame = +1 / +1
Query: 241 ASPTDLDIDSRRVEFNIISGTSMSCPHVSGLAALLRQAHPEWSPAAIKSALMTTAYNLDN 420
A+ DL+ID RRV FNIISGTSMSCPHVSGLAALLRQAHP+WSPAA+KSALMT NLDN
Sbjct: 7 AAGADLEIDPRRVPFNIISGTSMSCPHVSGLAALLRQAHPDWSPAAVKSALMTGGGNLDN 186
Query: 421 SGETIKDLATGVESTPFVRGAGHVDPNAALDPRLVYDA 534
SGE IKDLATG +STPFVRGAGHVDPN+AL+P LVYDA
Sbjct: 187 SGEIIKDLATGSQSTPFVRGAGHVDPNSALNPGLVYDA 300
Score = 166 bits (360), Expect = 3e-041
Identities = 78/103 (75%), Positives = 82/103 (79%)
Frame = -1 / -3
Query: 545 SSEPASYTSLGSRAALGST*PAPRTNGVDSTPVARSLMVSPELSRLYAVVMSADLIAAGL 366
S+ ASYTS G A LGST PAPRTNGVD PVARSLM+SPELSRL VMSADL AAGL
Sbjct: 311 SAVSASYTSPGLSALLGSTCPAPRTNGVDWLPVARSLMISPELSRLPPPVMSADLTAAGL 132
Query: 365 HSGCAWRSSAARPLTCGQDMDVPEMMLNSTRLESMSRSVGEAA 237
SGCA RSSAARPLTCG DMDVPEMMLN TRL S+SRS A+
Sbjct: 131 QSGCACRSSAARPLTCGHDMDVPEMMLNGTRLGSISRSAPAAS 3
>gb|CA031998.1|CA031998 HX11L12r HX Hordeum vulgare subsp. vulgare cDNA clone HX11L12
5-PRIME, mRNA sequence
Length = 637
Score = 190 bits (412), Expect(2) = 1e-048
Identities = 80/123 (65%), Positives = 95/123 (77%)
Frame = +1 / +2
Query: 163 NYRAPEILKPDVIAPGVNILAAWTGAASPTDLDIDSRRVEFNIISGTSMSCPHVSGLAAL 342
N P ILKPD+IAPGVNILAAW+G+ P+ + D RR FNIISGTSMSCPHVSGLAA
Sbjct: 11 NTVTPGILKPDLIAPGVNILAAWSGSVGPSGIADDHRRTSFNIISGTSMSCPHVSGLAAF 190
Query: 343 LRQAHPEWSPAAIKSALMTTAYNLDNSGETIKDLATGVESTPFVRGAGHVDPNAALDPRL 522
LR AH +WSPAAI+SALMTTAY +G+ + D+AT + +TP GAGHVDP+ A+DP L
Sbjct: 191 LRSAHQDWSPAAIRSALMTTAYAAYPNGDGLLDVATELAATPLDMGAGHVDPSKAVDPGL 370
Query: 523 VYD 531
VYD
Sbjct: 371 VYD 379
Score = 138 bits (298), Expect = 1e-032
Identities = 69/124 (55%), Positives = 81/124 (65%)
Frame = -1 / -2
Query: 545 SSEPASYTSLGSRAALGST*PAPRTNGVDSTPVARSLMVSPELSRLYAVVMSADLIAAGL 366
S+ SYTS GS A LGST PAP ++GV ++ VA S SP YAVV+SAD +AAGL
Sbjct: 393 SAAVRSYTSPGSTALLGSTCPAPMSSGVAASSVATSRRPSPLGYAAYAVVISADRMAAGL 214
Query: 365 HSGCAWRSSAARPLTCGQDMDVPEMMLNSTRLESMSRSVGEAAPVHAASMLTPGAMTSGL 186
S CA R +AA PLTCG DMDVP+MML R S + G P HAA M TPGA+ SGL
Sbjct: 213 QSWCAERRNAASPLTCGHDMDVPDMMLKLVRRWSSAIPDGPTDPDHAARMFTPGAIRSGL 34
Query: 185 RISG 174
R+ G
Sbjct: 33 RMPG 22
Score = 22.1 bits (42), Expect(2) = 1e-048
Identities = 6/9 (66%), Positives = 7/9 (77%)
Frame = +2 / +3
Query: 515 QGWCTTPAP 541
+GWCTT P
Sbjct: 363 RGWCTTSPP 389
>gb|CA028647.1|CA028647 HZ62M08r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ62M08
5-PRIME, mRNA sequence
Length = 487
Score = 190 bits (411), Expect(2) = 2e-048
Identities = 79/119 (66%), Positives = 94/119 (78%)
Frame = +1 / +2
Query: 175 PEILKPDVIAPGVNILAAWTGAASPTDLDIDSRRVEFNIISGTSMSCPHVSGLAALLRQA 354
P ILKPD+IAPGVNILAAW+G+ P+ + D RR FNIISGTSMSCPHVSGLAA LR A
Sbjct: 17 PGILKPDLIAPGVNILAAWSGSVGPSGIADDHRRTSFNIISGTSMSCPHVSGLAAFLRSA 196
Query: 355 HPEWSPAAIKSALMTTAYNLDNSGETIKDLATGVESTPFVRGAGHVDPNAALDPRLVYD 531
H +WSPAAI+SALMTTAY +G+ + D+AT + +TP GAGHVDP+ A+DP LVYD
Sbjct: 197 HQDWSPAAIRSALMTTAYAAYPNGDGLLDVATELAATPLDMGAGHVDPSKAVDPGLVYD 373
Score = 138 bits (298), Expect = 1e-032
Identities = 69/124 (55%), Positives = 81/124 (65%)
Frame = -1 / -2
Query: 545 SSEPASYTSLGSRAALGST*PAPRTNGVDSTPVARSLMVSPELSRLYAVVMSADLIAAGL 366
S+ SYTS GS A LGST PAP ++GV ++ VA S SP YAVV+SAD +AAGL
Sbjct: 387 SAAVRSYTSPGSTALLGSTCPAPMSSGVAASSVATSRRPSPLGYAAYAVVISADRMAAGL 208
Query: 365 HSGCAWRSSAARPLTCGQDMDVPEMMLNSTRLESMSRSVGEAAPVHAASMLTPGAMTSGL 186
S CA R +AA PLTCG DMDVP+MML R S + G P HAA M TPGA+ SGL
Sbjct: 207 QSWCAERRNAASPLTCGHDMDVPDMMLKLVRRWSSAIPDGPTDPDHAARMFTPGAIRSGL 28
Query: 185 RISG 174
R+ G
Sbjct: 27 RMPG 16
Score = 22.1 bits (42), Expect(2) = 2e-048
Identities = 6/9 (66%), Positives = 7/9 (77%)
Frame = +2 / +3
Query: 515 QGWCTTPAP 541
+GWCTT P
Sbjct: 357 RGWCTTSPP 383
>gb|BQ661229.1|BQ661229 HM02I21u HM Hordeum vulgare subsp. vulgare cDNA clone HM02I21
3-PRIME, mRNA sequence
Length = 541
Score = 160 bits (346), Expect(2) = 2e-045
Identities = 65/100 (65%), Positives = 81/100 (81%)
Frame = +1 / +2
Query: 136 VAAFSSRGPNYRAPEILKPDVIAPGVNILAAWTGAASPTDLDIDSRRVEFNIISGTSMSC 315
+AAFSS+GPN PEILKPD+ APGV ++AA+T A +PT+L D RRV F +SGTSMSC
Sbjct: 23 MAAFSSQGPNPVNPEILKPDITAPGVGVIAAFTRAMAPTELAFDERRVAFTTMSGTSMSC 202
Query: 316 PHVSGLAALLRQAHPEWSPAAIKSALMTTAYNLDNSGETI 435
PHVSGL LL+ HP+WSP+AIKSA+MTTA ++DN GE+I
Sbjct: 203 PHVSGLVGLLKALHPDWSPSAIKSAMMTTATDVDNKGESI 322
Score = 108 bits (231), Expect = 2e-023
Identities = 55/99 (55%), Positives = 65/99 (65%)
Frame = -1 / -2
Query: 434 MVSPELSRLYAVVMSADLIAAGLHSGCAWRSSAARPLTCGQDMDVPEMMLNSTRLESMSR 255
M SP LS AVV+ ADL+A GL SG + S RP TCG DMDVP+M++ +TR S +
Sbjct: 321 MDSPLLSTSVAVVIIADLMAEGLQSGWSALRSPTRPETCGHDMDVPDMVVKATRRSSKAS 142
Query: 254 SVGEAAPVHAASMLTPGAMTSGLRISGAR*LGPRLENAA 138
SVG A V+AA TPGA+ SGLRISG LGP E AA
Sbjct: 141 SVGAMARVNAAITPTPGAVMSGLRISGLTGLGPCEEKAA 25
Score = 41.6 bits (85), Expect(2) = 2e-045
Identities = 16/26 (61%), Positives = 19/26 (73%)
Frame = +1 / +2
Query: 466 PFVRGAGHVDPNAALDPRLVYDAGSD 543
PF GAGHV P+ A++P LVYD G D
Sbjct: 350 PFAYGAGHVWPSRAMNPGLVYDLGPD 427
>gb|AL507406.1|AL507406 AL507406 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY05H13V 5',
mRNA sequence
Length = 645
Score = 160 bits (346), Expect(2) = 3e-045
Identities = 69/102 (67%), Positives = 80/102 (78%)
Frame = +1 / +3
Query: 151 SRGPNYRAPEILKPDVIAPGVNILAAWTGAASPTDLDIDSRRVEFNIISGTSMSCPHVSG 330
S GPN APEILKPDVIAPGVNILAAW+GAASP+ D D RRVE+NIISGTSM+CPHV+G
Sbjct: 3 SXGPNPIAPEILKPDVIAPGVNILAAWSGAASPSRSDKDPRRVEYNIISGTSMACPHVAG 182
Query: 331 LAALLRQAHPEWSPAAIKSALMTTAYNLDNSGETIKDLATGV 456
AAL+++ H W+PA I+SALMTTA LD G I D + V
Sbjct: 183 AAALIKKRHGGWTPAMIRSALMTTAGPLDKDGRDIVDSGSAV 308
Score = 109 bits (235), Expect(2) = 3e-029
Identities = 56/100 (56%), Positives = 63/100 (63%)
Frame = -1 / -3
Query: 455 TPVARSLMVSPELSRLYAVVMSADLIAAGLHSGCAWRSSAARPLTCGQDMDVPEMMLNST 276
T + S M P LS AVV+SA+ I AG+ C + AA P TCG MDVP+MML ST
Sbjct: 307 TALPLSTMSLPSLSSGPAVVISAERIMAGVQPPCRFLIRAAAPATCGHAMDVPDMMLYST 128
Query: 275 RLESMSRSVGEAAPVHAASMLTPGAMTSGLRISGAR*LGP 156
S+S GEAAP AA M TPGAMTSG RISGA LGP
Sbjct: 127 LRGSLSERDGEAAPDQAARMFTPGAMTSGFRISGAIGLGP 8
Score = 40.7 bits (83), Expect(2) = 3e-045
Identities = 17/32 (53%), Positives = 21/32 (65%)
Frame = +1 / +3
Query: 445 ATGVESTPFVRGAGHVDPNAALDPRLVYDAGS 540
A + +TP GAG V P A+DP LVYDAG+
Sbjct: 312 AANMGATPLTAGAGLVLPRLAMDPGLVYDAGT 407
Score = 37.1 bits (75), Expect(2) = 3e-029
Identities = 17/28 (60%), Positives = 19/28 (67%)
Frame = -1 / -3
Query: 545 SSEPASYTSLGSRAALGST*PAPRTNGV 462
S PASYT GS A+ GST PAP +GV
Sbjct: 412 SCVPASYTRPGSMASRGSTSPAPAVSGV 329
>gb|CA001648.1|CA001648 HS05C24r HS Hordeum vulgare subsp. vulgare cDNA clone HS05C24
5-PRIME, mRNA sequence
Length = 455
Score = 178 bits (386), Expect(2) = 5e-045
Identities = 74/113 (65%), Positives = 89/113 (78%)
Frame = +1 / +3
Query: 193 DVIAPGVNILAAWTGAASPTDLDIDSRRVEFNIISGTSMSCPHVSGLAALLRQAHPEWSP 372
D+IAPGVNILAAW+G+ P+ + D RR FNIISGTSMSCPHVSGLAA LR AH +WSP
Sbjct: 3 DLIAPGVNILAAWSGSVGPSGIADDHRRTSFNIISGTSMSCPHVSGLAAFLRSAHQDWSP 182
Query: 373 AAIKSALMTTAYNLDNSGETIKDLATGVESTPFVRGAGHVDPNAALDPRLVYD 531
AAI+SALMTTAY +G+ + D+AT + +TP GAGHVDP+ A+DP LVYD
Sbjct: 183 AAIRSALMTTAYAAYPNGDGLLDVATELAATPLDMGAGHVDPSKAVDPGLVYD 341
Score = 129 bits (277), Expect = 9e-030
Identities = 65/118 (55%), Positives = 76/118 (64%)
Frame = -1 / -2
Query: 545 SSEPASYTSLGSRAALGST*PAPRTNGVDSTPVARSLMVSPELSRLYAVVMSADLIAAGL 366
S+ SYTS GS A LGST PAP ++GV ++ VA S SP YAVV+SAD +AAGL
Sbjct: 355 SAAVRSYTSPGSTALLGSTCPAPMSSGVAASSVATSRRPSPLGYAAYAVVISADRMAAGL 176
Query: 365 HSGCAWRSSAARPLTCGQDMDVPEMMLNSTRLESMSRSVGEAAPVHAASMLTPGAMTS 192
S CA R +AA PLTCG DMDVP+MML R S + G P HAA M TPGA+ S
Sbjct: 175 QSWCAERRNAASPLTCGHDMDVPDMMLKLVRRWSSAIPDGPTDPDHAARMFTPGAIRS 2
Score = 22.1 bits (42), Expect(2) = 5e-045
Identities = 6/9 (66%), Positives = 7/9 (77%)
Frame = +2 / +1
Query: 515 QGWCTTPAP 541
+GWCTT P
Sbjct: 325 RGWCTTSPP 351
>gb|CA023721.1|CA023721 HZ47D07r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ47D07
5-PRIME, mRNA sequence
Length = 521
Score = 150 bits (324), Expect(2) = 1e-044
Identities = 61/82 (74%), Positives = 71/82 (86%)
Frame = +1 / +2
Query: 127 APRVAAFSSRGPNYRAPEILKPDVIAPGVNILAAWTGAASPTDLDIDSRRVEFNIISGTS 306
+P VAAFSSRGPNY EILKPD+IAPGVNILAAW+G ASP+ L D RRV FNI+SGTS
Sbjct: 275 SPVVAAFSSRGPNYLTLEILKPDLIAPGVNILAAWSGDASPSSLASDRRRVGFNILSGTS 454
Query: 307 MSCPHVSGLAALLRQAHPEWSP 372
MSCPHV+G+AALL+ +HP+WSP
Sbjct: 455 MSCPHVAGVAALLKASHPDWSP 520
Score = 115 bits (248), Expect = 9e-026
Identities = 53/81 (65%), Positives = 58/81 (71%)
Frame = -1 / -3
Query: 371 GLHSGCAWRSSAARPLTCGQDMDVPEMMLNSTRLESMSRSVGEAAPVHAASMLTPGAMTS 192
GL SG SSAA P TCG DMDVP+ MLN TR S++R G A+P+HAA M TPGAM S
Sbjct: 519 GLQSGWLALSSAATPATCGHDMDVPDRMLNPTRRRSLARLDGLASPLHAARMFTPGAMRS 340
Query: 191 GLRISGAR*LGPRLENAATRG 129
GLRIS R* GPR ENAAT G
Sbjct: 339 GLRISRVR*FGPREENAATTG 277
Score = 48.9 bits (101), Expect(2) = 1e-044
Identities = 20/42 (47%), Positives = 26/42 (61%)
Frame = +1 / +2
Query: 1 HLVPATMVGQKFGDKIRYYVQTDPSPTATIVFRGTVIGKSPS 126
HL+PA VG+ G + Y +T P PTAT+ F GT +G PS
Sbjct: 152 HLLPAVAVGESEGVAAKKYTRTAPKPTATLSFAGTKLGIRPS 277
>gb|BQ762483.1|BQ762483 EBro02_SQ004_B05_R root, 3 week, hydroponic grown, low nitrogen, cv
Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone
EBro02_SQ004_B05 5', mRNA sequence
Length = 599
Score = 160 bits (346), Expect(2) = 2e-044
Identities = 66/84 (78%), Positives = 76/84 (90%)
Frame = +1 / +3
Query: 103 TVIGKSPSAPRVAAFSSRGPNYRAPEILKPDVIAPGVNILAAWTGAASPTDLDIDSRRVE 282
TV+G +P +PR+AAFSSRGPN RAPEI KPDV APGV+ILAAWTGA SPT+LD D+RRV+
Sbjct: 348 TVVGSTPPSPRMAAFSSRGPNLRAPEIFKPDVTAPGVDILAAWTGANSPTELDSDTRRVK 527
Query: 283 FNIISGTSMSCPHVSGLAALLRQA 354
+NIISGTSMSC HVSG+AALLRQA
Sbjct: 528 YNIISGTSMSCXHVSGIAALLRQA 599
Score = 123 bits (264), Expect(2) = 1e-028
Identities = 58/84 (69%), Positives = 62/84 (73%)
Frame = -1 / -2
Query: 353 AWRSSAARPLTCGQDMDVPEMMLNSTRLESMSRSVGEAAPVHAASMLTPGAMTSGLRISG 174
A RSSAA PLTC DMDVP+MML TRL S+S SVGE APV AA M TPGA+TSGL+ISG
Sbjct: 598 ACRSSAAMPLTCXHDMDVPDMMLYFTRLVSLSSSVGELAPVQAARMSTPGAVTSGLKISG 419
Query: 173 AR*LGPRLENAATRGADGDLPMTV 102
AR GPRLE AA G G P TV
Sbjct: 418 ARKFGPRLEKAAILGEGGVEPTTV 347
Score = 38.5 bits (78), Expect(2) = 2e-044
Identities = 17/33 (51%), Positives = 21/33 (63%)
Frame = +1 / +1
Query: 1 HLVPATMVGQKFGDKIRYYVQTDPSPTATIVFR 99
H+ PAT V G KI Y++ SPTATI+FR
Sbjct: 247 HVHPATAVAFVDGAKIFKYIRAQASPTATIIFR 345
Score = 22.1 bits (42), Expect(2) = 1e-028
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -1 / -1
Query: 98 RNTMVAVGDGSVWT*YLILSPNFCPTIVAG 9
R +VAVG+ IL+P+ T VAG
Sbjct: 344 RKMIVAVGEACARMYLKILAPSTNATAVAG 255
>gb|CK123495.1|CK123495 BES1824104d10 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010D104 5-PRIME, mRNA sequence
Length = 588
Score = 153 bits (330), Expect(2) = 5e-043
Identities = 65/95 (68%), Positives = 76/95 (80%)
Frame = +1 / +2
Query: 172 APEILKPDVIAPGVNILAAWTGAASPTDLDIDSRRVEFNIISGTSMSCPHVSGLAALLRQ 351
APEILKPDVIAPGVNILAAW+GAASP+ D D RRVE+NIISGTSM+CPHV+G AAL+++
Sbjct: 8 APEILKPDVIAPGVNILAAWSGAASPSRSDKDPRRVEYNIISGTSMACPHVAGAAALIKK 187
Query: 352 AHPEWSPAAIKSALMTTAYNLDNSGETIKDLATGV 456
H W+PA I+SALMTTA LD G I D + V
Sbjct: 188 RHGGWTPAMIRSALMTTAGPLDKDGRDIVDSGSAV 292
Score = 105 bits (225), Expect(2) = 7e-028
Identities = 53/95 (55%), Positives = 60/95 (63%)
Frame = -1 / -1
Query: 455 TPVARSLMVSPELSRLYAVVMSADLIAAGLHSGCAWRSSAARPLTCGQDMDVPEMMLNST 276
T + S M P LS AVV+SA+ I AG+ C + AA P TCG MDVP+MML ST
Sbjct: 291 TALPLSTMSLPSLSSGPAVVISAERIMAGVQPPCRFLIRAAAPATCGHAMDVPDMMLYST 112
Query: 275 RLESMSRSVGEAAPVHAASMLTPGAMTSGLRISGA 171
S+S GEAAP AA M TPGAMTSG RISGA
Sbjct: 111 LRGSLSERDGEAAPDQAARMFTPGAMTSGFRISGA 7
Score = 40.7 bits (83), Expect(2) = 5e-043
Identities = 17/32 (53%), Positives = 21/32 (65%)
Frame = +1 / +2
Query: 445 ATGVESTPFVRGAGHVDPNAALDPRLVYDAGS 540
A + +TP GAG V P A+DP LVYDAG+
Sbjct: 296 AANMGATPLTAGAGLVLPRLAMDPGLVYDAGT 391
Score = 37.1 bits (75), Expect(2) = 7e-028
Identities = 17/28 (60%), Positives = 19/28 (67%)
Frame = -1 / -1
Query: 545 SSEPASYTSLGSRAALGST*PAPRTNGV 462
S PASYT GS A+ GST PAP +GV
Sbjct: 396 SCVPASYTRPGSMASRGSTSPAPAVSGV 313
>gb|CK123284.1|CK123284 BES1824103c21 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010C213 5-PRIME, mRNA sequence
Length = 567
Score = 153 bits (330), Expect(2) = 5e-043
Identities = 65/95 (68%), Positives = 76/95 (80%)
Frame = +1 / +2
Query: 172 APEILKPDVIAPGVNILAAWTGAASPTDLDIDSRRVEFNIISGTSMSCPHVSGLAALLRQ 351
APEILKPDVIAPGVNILAAW+GAASP+ D D RRVE+NIISGTSM+CPHV+G AAL+++
Sbjct: 11 APEILKPDVIAPGVNILAAWSGAASPSRSDKDPRRVEYNIISGTSMACPHVAGAAALIKK 190
Query: 352 AHPEWSPAAIKSALMTTAYNLDNSGETIKDLATGV 456
H W+PA I+SALMTTA LD G I D + V
Sbjct: 191 RHGGWTPAMIRSALMTTAGPLDKDGRDIVDSGSAV 295
Score = 105 bits (225), Expect(2) = 7e-028
Identities = 53/95 (55%), Positives = 60/95 (63%)
Frame = -1 / -1
Query: 455 TPVARSLMVSPELSRLYAVVMSADLIAAGLHSGCAWRSSAARPLTCGQDMDVPEMMLNST 276
T + S M P LS AVV+SA+ I AG+ C + AA P TCG MDVP+MML ST
Sbjct: 294 TALPLSTMSLPSLSSGPAVVISAERIMAGVQPPCRFLIRAAAPATCGHAMDVPDMMLYST 115
Query: 275 RLESMSRSVGEAAPVHAASMLTPGAMTSGLRISGA 171
S+S GEAAP AA M TPGAMTSG RISGA
Sbjct: 114 LRGSLSERDGEAAPDQAARMFTPGAMTSGFRISGA 10
Score = 40.7 bits (83), Expect(2) = 5e-043
Identities = 17/32 (53%), Positives = 21/32 (65%)
Frame = +1 / +2
Query: 445 ATGVESTPFVRGAGHVDPNAALDPRLVYDAGS 540
A + +TP GAG V P A+DP LVYDAG+
Sbjct: 299 AANMGATPLTAGAGLVLPRLAMDPGLVYDAGT 394
Score = 37.1 bits (75), Expect(2) = 7e-028
Identities = 17/28 (60%), Positives = 19/28 (67%)
Frame = -1 / -1
Query: 545 SSEPASYTSLGSRAALGST*PAPRTNGV 462
S PASYT GS A+ GST PAP +GV
Sbjct: 399 SCVPASYTRPGSMASRGSTSPAPAVSGV 316
>gb|BF260614.2|BF260614 HVSMEf0022H17f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0022H17f, mRNA sequence
Length = 804
Score = 155 bits (334), Expect(2) = 1e-042
Identities = 64/93 (68%), Positives = 77/93 (82%)
Frame = +1 / +2
Query: 127 APRVAAFSSRGPNYRAPEILKPDVIAPGVNILAAWTGAASPTDLDIDSRRVEFNIISGTS 306
+P +A FSSRGPN P ILKPDV APG+NILAAW+ A+SPT LD D+R V++NI+SGTS
Sbjct: 56 SPVMAQFSSRGPNVLEPSILKPDVTAPGLNILAAWSEASSPTKLDGDNRVVKYNIMSGTS 235
Query: 307 MSCPHVSGLAALLRQAHPEWSPAAIKSALMTTA 405
MSCPHVS A LL+ AHP+WS AAI+SA+MTTA
Sbjct: 236 MSCPHVSATAVLLKSAHPDWSAAAIRSAIMTTA 334
Score = 38.0 bits (77), Expect(2) = 1e-042
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = +1 / +2
Query: 451 GVESTPFVRGAGHVDPNAALDPRLVYDA 534
G + P G+GH+ P ALDP LVYDA
Sbjct: 377 GTVAEPMDYGSGHIRPRHALDPGLVYDA 460
>gb|BM368109.2|BM368109 EBed01_SQ002_D08_R endosperm, 6 DPA, no treatment, cv Optic, EBed01
Hordeum vulgare subsp. vulgare cDNA clone
EBed01_SQ002_D08 5', mRNA sequence
Length = 506
Score = 128 bits (275), Expect(3) = 1e-042
Identities = 54/82 (65%), Positives = 64/82 (78%)
Frame = +1 / +1
Query: 127 APRVAAFSSRGPNYRAPEILKPDVIAPGVNILAAWTGAASPTDLDIDSRRVEFNIISGTS 306
AP +AAFSS+GPN P+ILKPD+ APGV+ILAA+TG A PT L DSRRV FN SGTS
Sbjct: 58 APFMAAFSSQGPNTVTPQILKPDITAPGVSILAAFTGLAGPTGLTFDSRRVLFNSESGTS 237
Query: 307 MSCPHVSGLAALLRQAHPEWSP 372
MSCPHV+G+A LL+ HP +P
Sbjct: 238 MSCPHVAGIAGLLKALHPTGAP 303
Score = 42.1 bits (86), Expect(3) = 1e-042
Identities = 16/24 (66%), Positives = 17/24 (70%)
Frame = +1 / +2
Query: 460 STPFVRGAGHVDPNAALDPRLVYD 531
+TPF AGHV PN A DP LVYD
Sbjct: 386 ATPFAYSAGHVQPNRAADPGLVYD 457
Score = 40.7 bits (83), Expect(3) = 1e-042
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +1 / +3
Query: 358 PEWSPAAIKSALMTTAYNLDNS 423
P+WSPAAIKSA+MTTA DN+
Sbjct: 288 PDWSPAAIKSAIMTTAKVQDNT 353
>gb|AL503449.1|AL503449 AL503449 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW02D01T 5', mRNA sequence
Length = 700
Score = 152 bits (328), Expect(2) = 9e-042
Identities = 63/89 (70%), Positives = 74/89 (83%)
Frame = +1 / +1
Query: 139 AAFSSRGPNYRAPEILKPDVIAPGVNILAAWTGAASPTDLDIDSRRVEFNIISGTSMSCP 318
A FSSRGPN P ILKPDV APG+NILAAW+ A+SPT LD D+R V++NI+SGTSMSCP
Sbjct: 16 AQFSSRGPNVLEPSILKPDVTAPGLNILAAWSEASSPTKLDGDNRVVKYNIMSGTSMSCP 195
Query: 319 HVSGLAALLRQAHPEWSPAAIKSALMTTA 405
HVS A LL+ AHP+WS AAI+SA+MTTA
Sbjct: 196 HVSATAVLLKSAHPDWSAAAIRSAIMTTA 282
Score = 37.5 bits (76), Expect(2) = 9e-042
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = +1 / +1
Query: 451 GVESTPFVRGAGHVDPNAALDPRLVYDA 534
G + P G+GH+ P ALDP LVYDA
Sbjct: 325 GTVAGPMDYGSGHIRPRHALDPGLVYDA 408
>gb|BF253678.2|BF253678 HVSMEf0001N02f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0001N02f, mRNA sequence
Length = 554
Score = 128 bits (275), Expect(2) = 2e-041
Identities = 53/86 (61%), Positives = 65/86 (75%)
Frame = +1 / +3
Query: 1 HLVPATMVGQKFGDKIRYYVQTDPSPTATIVFRGTVIGKSPSAPRVAAFSSRGPNYRAPE 180
H++PAT V G+KI+ Y++ SPTATIVFR TV+G +PS PR+A+FSSRGPN RA E
Sbjct: 138 HVLPATGVPFSXGEKIKMYIRAQASPTATIVFRSTVVGPTPSYPRMASFSSRGPNTRAAE 317
Query: 181 ILKPDVIAPGVNILAAWTGAASPTDL 258
I KPDV PGV+ILA WTG PT+L
Sbjct: 318 IFKPDVNRPGVDILAGWTGGNLPTEL 395
Score = 60.8 bits (127), Expect(2) = 2e-041
Identities = 25/57 (43%), Positives = 34/57 (59%)
Frame = +1 / +1
Query: 238 AASPTDLDIDSRRVEFNIISGTSMSCPHVSGLAALLRQAHPEWSPAAIKSALMTTAY 408
A P D+ V+++II GT + CPH S + L+RQ PEW+P K LMTTA+
Sbjct: 376 ATYPRSFRTDTMGVQYHIILGTFILCPHESRIVGLVRQKKPEWNPGMNKIRLMTTAF 546
>gb|BE216378.3|BE216378 HV_CEb0010F10f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0010F10f, mRNA sequence
Length = 873
Score = 129 bits (278), Expect(3) = 3e-040
Identities = 55/74 (74%), Positives = 58/74 (78%)
Frame = +1 / +2
Query: 127 APRVAAFSSRGPNYRAPEILKPDVIAPGVNILAAWTGAASPTDLDIDSRRVEFNIISGTS 306
+P VAAFSSRGPN PEILKPD+I P VNILAAWTG A PT L D+RRV FNII GTS
Sbjct: 578 SPLVAAFSSRGPNMITPEILKPDIIGPXVNILAAWTGKAGPTGLAADTRRVSFNIIXGTS 757
Query: 307 MSCPHVSGLAALLR 348
MSCPHV LA LLR
Sbjct: 758 MSCPHVKRLAXLLR 799
Score = 101 bits (216), Expect(3) = 3e-026
Identities = 48/73 (65%), Positives = 49/73 (67%)
Frame = -1 / -1
Query: 347 RSSAARPLTCGQDMDVPEMMLNSTRLESMSRSVGEAAPVHAASMLTPGAMTSGLRISGAR 168
RSS A TCG DMDVP MML TR S +R VG A PVHAA MLT G M SGLRISG
Sbjct: 798 RSSXASRFTCGHDMDVPXMMLKLTRRVSAARPVGPALPVHAARMLTXGPMMSGLRISGVI 619
Query: 167 *LGPRLENAATRG 129
GPR ENAAT G
Sbjct: 618 MFGPRDENAATNG 580
Score = 48.0 bits (99), Expect(3) = 3e-040
Identities = 20/42 (47%), Positives = 26/42 (61%)
Frame = +1 / +2
Query: 1 HLVPATMVGQKFGDKIRYYVQTDPSPTATIVFRGTVIGKSPS 126
HL+PA VG+K G I+ Y+ + PTATIV GT + PS
Sbjct: 455 HLLPAAGVGEKEGSAIKSYIASAAKPTATIVIAGTQVNVRPS 580
Score = 30.3 bits (60), Expect(3) = 3e-026
Identities = 18/46 (39%), Positives = 22/46 (47%)
Frame = -1 / -1
Query: 140 ATRGADGDLPMTVPRNTMVAVGDGSVWT*YLILSPNFCPTIVAGTR 3
A +G VP T+VAVG + * I P+F PT AG R
Sbjct: 594 AATNGEGRTFTCVPAITIVAVGLAADAM*DFIAEPSFSPTPAAGRR 457
Score = 25.2 bits (49), Expect(3) = 3e-040
Identities = 9/19 (47%), Positives = 10/19 (52%)
Frame = +1 / +1
Query: 352 AHPEWSPAAIKSALMTTAY 408
AHPEWSP A T +
Sbjct: 802 AHPEWSPPPALGAXETATH 858
Score = 23.0 bits (44), Expect(3) = 3e-026
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = -1 / -2
Query: 398 VMSADLIAAGLHSGCA 351
V A GLHSGCA
Sbjct: 848 VSXAPSAGGGLHSGCA 801
>gb|CK124729.1|CK124729 BES1824110c21 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010C2110 5-PRIME, mRNA sequence
Length = 524
Score = 153 bits (330), Expect(2) = 2e-039
Identities = 65/95 (68%), Positives = 76/95 (80%)
Frame = +1 / +1
Query: 172 APEILKPDVIAPGVNILAAWTGAASPTDLDIDSRRVEFNIISGTSMSCPHVSGLAALLRQ 351
APEILKPDVIAPGVNILAAW+GAASP+ D D RRVE+NIISGTSM+CPHV+G AAL+++
Sbjct: 7 APEILKPDVIAPGVNILAAWSGAASPSRSDKDPRRVEYNIISGTSMACPHVAGAAALIKK 186
Query: 352 AHPEWSPAAIKSALMTTAYNLDNSGETIKDLATGV 456
H W+PA I+SALMTTA LD G I D + V
Sbjct: 187 RHGGWTPAMIRSALMTTAGPLDKDGRDIVDSGSAV 291
Score = 105 bits (225), Expect(2) = 2e-025
Identities = 53/95 (55%), Positives = 60/95 (63%)
Frame = -1 / -1
Query: 455 TPVARSLMVSPELSRLYAVVMSADLIAAGLHSGCAWRSSAARPLTCGQDMDVPEMMLNST 276
T + S M P LS AVV+SA+ I AG+ C + AA P TCG MDVP+MML ST
Sbjct: 290 TALPLSTMSLPSLSSGPAVVISAERIMAGVQPPCRFLIRAAAPATCGHAMDVPDMMLYST 111
Query: 275 RLESMSRSVGEAAPVHAASMLTPGAMTSGLRISGA 171
S+S GEAAP AA M TPGAMTSG RISGA
Sbjct: 110 LRGSLSERDGEAAPDQAARMFTPGAMTSGFRISGA 6
Score = 28.9 bits (57), Expect(2) = 2e-025
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = -1 / -3
Query: 545 SSEPASYTSLGSRAALGST*PAP 477
S PASYT G A+ GST P P
Sbjct: 396 SCVPASYTRPGXMASRGSTSPGP 328
Score = 28.4 bits (56), Expect(2) = 2e-039
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +1 / +2
Query: 478 GAGHVDPNAALDPRLVYDAGS 540
G G V P A+ P LVYDAG+
Sbjct: 329 GPGLVLPRLAMXPGLVYDAGT 391
>gb|BF630687.2|BF630687 HVSMEb0013B12f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0013B12f, mRNA sequence
Length = 775
Score = 80.4 bits (170), Expect(4) = 3e-038
Identities = 33/60 (55%), Positives = 45/60 (75%)
Frame = +1 / +1
Query: 262 IDSRRVEFNIISGTSMSCPHVSGLAALLRQAHPEWSPAAIKSALMTTAYNLDNSGETIKD 441
ID + F + SGTSMS PH+SG+AA+++ HP WSPAAIKSALMT++ D++G +KD
Sbjct: 229 IDDVSLAFFMESGTSMSTPHLSGIAAVIKSLHPSWSPAAIKSALMTSSDIADHAGVPVKD 408
Score = 60.3 bits (126), Expect(4) = 3e-038
Identities = 24/35 (68%), Positives = 28/35 (80%)
Frame = +1 / +1
Query: 127 APRVAAFSSRGPNYRAPEILKPDVIAPGVNILAAW 231
AP VA FSSRGP+ +P ILKPD+ PG+NILAAW
Sbjct: 97 APTVAFFSSRGPSKASPGILKPDISGPGMNILAAW 201
Score = 37.5 bits (76), Expect(4) = 3e-038
Identities = 13/24 (54%), Positives = 20/24 (83%)
Frame = +1 / +1
Query: 55 YVQTDPSPTATIVFRGTVIGKSPS 126
Y ++ P+PTA+I F+GTV+G SP+
Sbjct: 28 YFKSTPNPTASITFKGTVLGISPA 99
Score = 35.7 bits (72), Expect(4) = 3e-038
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +1 / +1
Query: 469 FVRGAGHVDPNAALDPRLVYD 531
F GAG+V+P+ A+DP LVYD
Sbjct: 433 FTMGAGYVNPSRAVDPGLVYD 495
>gb|BI948566.1|BI948566 HVSMEl0010B14f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0010B14f, mRNA sequence
Length = 837
Score = 101 bits (217), Expect(2) = 4e-037
Identities = 43/53 (81%), Positives = 44/53 (83%)
Frame = +1 / +1
Query: 1 HLVPATMVGQKFGDKIRYYVQTDPSPTATIVFRGTVIGKSPSAPRVAAFSSRG 159
HL+PATMVGQKFGDKI YV TDPSPTATIVF GTVIGKSPSAPRVA G
Sbjct: 424 HLIPATMVGQKFGDKIMRYVTTDPSPTATIVFHGTVIGKSPSAPRVAGVLEPG 582
Score = 91.3 bits (194), Expect(2) = 5e-031
Identities = 40/52 (76%), Positives = 41/52 (78%)
Frame = -1 / -2
Query: 158 PRLENAATRGADGDLPMTVPRNTMVAVGDGSVWT*YLILSPNFCPTIVAGTR 3
P ATRGADGD PMTVP TMVAVGDGSV T* +ILSPNFCPTIVAG R
Sbjct: 581 PGSRTPATRGADGDFPMTVPWKTMVAVGDGSVVT*RMILSPNFCPTIVAGMR 426
Score = 72.6 bits (153), Expect(2) = 4e-037
Identities = 29/36 (80%), Positives = 29/36 (80%)
Frame = +1 / +2
Query: 142 AFSSRGPNYRAPEILKPDVIAPGVNILAAWTGAASP 249
AFSSRGPNYRA EILKPDV APGVNIL WTG P
Sbjct: 566 AFSSRGPNYRATEILKPDVTAPGVNILGGWTGGGLP 673
Score = 72.2 bits (152), Expect(2) = 7e-025
Identities = 30/47 (63%), Positives = 34/47 (72%)
Frame = +3 / +3
Query: 3 PRAGDYGRAEVRRQDQVLRPDGPVANGDHRVPRHSHRQVAVGASSGG 143
P D G AEVRRQD LR D PV +GDHR+PRHSHR+VAV A+ G
Sbjct: 426 PHPSDNGGAEVRRQDHALRHDRPVPDGDHRLPRHSHREVAVCAARRG 566
Score = 61.7 bits (129), Expect(2) = 5e-031
Identities = 28/36 (77%), Positives = 29/36 (80%)
Frame = -1 / -1
Query: 248 GEAAPVHAASMLTPGAMTSGLRISGAR*LGPRLENA 141
G PV SMLTPGA+TSGLRIS AR*LGPRLENA
Sbjct: 672 GRPPPVQPPSMLTPGAVTSGLRISVAR*LGPRLENA 565
Score = 60.3 bits (126), Expect(2) = 7e-025
Identities = 24/31 (77%), Positives = 25/31 (80%)
Frame = +3 / +1
Query: 141 GVLEPRPQLPRTGDPQARRHRPGRQHTRGVD 233
GVLEP QLPR GDPQAR H P RQHTRG+D
Sbjct: 565 GVLEPGAQLPRDGDPQARCHSPRRQHTRGLD 657
>gb|CV057084.1|CV057084 BNEL23h10 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL23h10 5' similar to putative
serine protease, mRNA sequence
Length = 607
Score = 118 bits (254), Expect(2) = 2e-036
Identities = 50/70 (71%), Positives = 56/70 (80%)
Frame = +1 / +1
Query: 127 APRVAAFSSRGPNYRAPEILKPDVIAPGVNILAAWTGAASPTDLDIDSRRVEFNIISGTS 306
+P VAAFSSRGPN P ILKPD+IAP VNILAAW+G+ P+ + D RR FNIISGTS
Sbjct: 397 SPVVAAFSSRGPNTVTPGILKPDLIAPXVNILAAWSGSVGPSGIADDHRRTSFNIISGTS 576
Query: 307 MSCPHVSGLA 336
MSCPHVSGLA
Sbjct: 577 MSCPHVSGLA 606
Score = 53.0 bits (110), Expect(2) = 2e-036
Identities = 20/42 (47%), Positives = 27/42 (64%)
Frame = +1 / +1
Query: 1 HLVPATMVGQKFGDKIRYYVQTDPSPTATIVFRGTVIGKSPS 126
H++P VG+K G+ +R Y +DP PTA IVF GT + PS
Sbjct: 274 HILPGAGVGEKAGNAMRTYASSDPKPTANIVFAGTKVXVQPS 399
>gb|BM817291.1|BM817291 HC108C06_SK.ab1 HC Hordeum vulgare subsp. vulgare cDNA clone
HC108C06_SK.ab1 similar to Endopeptidase
La,Myeloblastin,Pycnoporopepsin,Trimerelysin
II,Endopeptidase Clp,Proteinase
K,Subtilisin,Aspergillopepsin
I,Cucumisin,Aspergillopepsin II,Omptin,, mRNA sequence
Length = 923
Score = 74.9 bits (158), Expect(3) = 5e-035
Identities = 30/46 (65%), Positives = 36/46 (78%)
Frame = +1 / +1
Query: 103 TVIGKSPSAPRVAAFSSRGPNYRAPEILKPDVIAPGVNILAAWTGA 240
TV+GK +PRVA+FSSRGP+ P ILKPD+ APGV ILAAW G+
Sbjct: 82 TVVGKGVLSPRVASFSSRGPSMLFPNILKPDIAAPGVGILAAWDGS 219
Score = 73.1 bits (154), Expect(3) = 5e-035
Identities = 29/48 (60%), Positives = 36/48 (75%)
Frame = +1 / +1
Query: 295 SGTSMSCPHVSGLAALLRQAHPEWSPAAIKSALMTTAYNLDNSGETIK 438
SGTSM+CPHVS + ALL+ HP+WSPA IKSA++TTA D G I+
Sbjct: 232 SGTSMACPHVSAVTALLKSVHPDWSPAMIKSAIVTTASVTDRFGMPIQ 375
Score = 37.1 bits (75), Expect(3) = 5e-035
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = +1 / +1
Query: 466 PFVRGAGHVDPNAALDPRLVYD 531
PF G GH++P+ A+DP LVYD
Sbjct: 406 PFDFGGGHINPDRAVDPGLVYD 471
>gb|BU975896.1|BU975896 HB32K03r BC Hordeum vulgare subsp. vulgare cDNA clone HB32K03
5-PRIME, mRNA sequence
Length = 475
Score = 81.7 bits (173), Expect(3) = 9e-034
Identities = 32/51 (62%), Positives = 43/51 (84%)
Frame = +1 / +2
Query: 283 FNIISGTSMSCPHVSGLAALLRQAHPEWSPAAIKSALMTTAYNLDNSGETI 435
F IISGTSM+ PHVSG+AAL++ HP+WSPAAIKSA++TT+ ++N G +I
Sbjct: 197 FKIISGTSMATPHVSGVAALIKSLHPDWSPAAIKSAILTTSDAVNNIGTSI 349
Score = 59.4 bits (124), Expect(3) = 9e-034
Identities = 23/37 (62%), Positives = 31/37 (83%)
Frame = +1 / +2
Query: 127 APRVAAFSSRGPNYRAPEILKPDVIAPGVNILAAWTG 237
+P VA+FSSRGP+ + +LKPD++APG+NILAAW G
Sbjct: 80 SPVVASFSSRGPSSISLGVLKPDILAPGLNILAAWPG 190
Score = 39.8 bits (81), Expect(3) = 9e-034
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +1 / +2
Query: 457 ESTPFVRGAGHVDPNAALDPRLVYDAG 537
+++ + RGAGHV+P A DP LVYD G
Sbjct: 368 KASAYDRGAGHVNPAXAADPGLVYDLG 448
>gb|CV056929.1|CV056929 BNEL22b6 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL22b6 5' similar to Oryza sativa,
mRNA sequence
Length = 542
Score = 81.7 bits (173), Expect(3) = 1e-033
Identities = 32/51 (62%), Positives = 43/51 (84%)
Frame = +1 / +3
Query: 283 FNIISGTSMSCPHVSGLAALLRQAHPEWSPAAIKSALMTTAYNLDNSGETI 435
F IISGTSM+ PHVSG+AAL++ HP+WSPAAIKSA++TT+ ++N G +I
Sbjct: 219 FKIISGTSMATPHVSGVAALIKSLHPDWSPAAIKSAILTTSDAVNNIGTSI 371
Score = 59.4 bits (124), Expect(3) = 1e-033
Identities = 23/37 (62%), Positives = 31/37 (83%)
Frame = +1 / +3
Query: 127 APRVAAFSSRGPNYRAPEILKPDVIAPGVNILAAWTG 237
+P VA+FSSRGP+ + +LKPD++APG+NILAAW G
Sbjct: 102 SPVVASFSSRGPSSISLGVLKPDILAPGLNILAAWPG 212
Score = 39.4 bits (80), Expect(3) = 1e-033
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +1 / +3
Query: 457 ESTPFVRGAGHVDPNAALDPRLVYDAG 537
+++ + RGAGHV+P A DP LVYD G
Sbjct: 390 KASAYDRGAGHVNPAKAADPGLVYDLG 470
>gb|BU966719.1|BU966719 HB02C09r BC Hordeum vulgare subsp. vulgare cDNA clone HB02C09
5-PRIME, mRNA sequence
Length = 508
Score = 81.7 bits (173), Expect(3) = 1e-033
Identities = 32/51 (62%), Positives = 43/51 (84%)
Frame = +1 / +2
Query: 283 FNIISGTSMSCPHVSGLAALLRQAHPEWSPAAIKSALMTTAYNLDNSGETI 435
F IISGTSM+ PHVSG+AAL++ HP+WSPAAIKSA++TT+ ++N G +I
Sbjct: 167 FKIISGTSMATPHVSGVAALIKSLHPDWSPAAIKSAILTTSDAVNNIGTSI 319
Score = 59.4 bits (124), Expect(3) = 1e-033
Identities = 23/37 (62%), Positives = 31/37 (83%)
Frame = +1 / +2
Query: 127 APRVAAFSSRGPNYRAPEILKPDVIAPGVNILAAWTG 237
+P VA+FSSRGP+ + +LKPD++APG+NILAAW G
Sbjct: 50 SPVVASFSSRGPSSISLGVLKPDILAPGLNILAAWPG 160
Score = 39.4 bits (80), Expect(3) = 1e-033
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +1 / +2
Query: 457 ESTPFVRGAGHVDPNAALDPRLVYDAG 537
+++ + RGAGHV+P A DP LVYD G
Sbjct: 338 KASAYDRGAGHVNPAKAADPGLVYDLG 418
>gb|BE454580.2|BE454580 HVSMEh0094F02f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0094F02f, mRNA sequence
Length = 690
Score = 84.0 bits (178), Expect(3) = 8e-033
Identities = 36/49 (73%), Positives = 40/49 (81%)
Frame = +1 / +2
Query: 127 APRVAAFSSRGPNYRAPEILKPDVIAPGVNILAAWTGAASPTDLDIDSR 273
+P VAAFSSRGPNY EILKPD+IAPGVNILAAW+G ASP+ L D R
Sbjct: 473 SPVVAAFSSRGPNYLTLEILKPDLIAPGVNILAAWSGDASPSSLASDRR 619
Score = 48.9 bits (101), Expect(3) = 8e-033
Identities = 20/42 (47%), Positives = 26/42 (61%)
Frame = +1 / +2
Query: 1 HLVPATMVGQKFGDKIRYYVQTDPSPTATIVFRGTVIGKSPS 126
HL+PA VG+ G + Y +T P PTAT+ F GT +G PS
Sbjct: 350 HLLPAVAVGESEGVAAKKYTRTAPKPTATLSFAGTKLGIRPS 475
Score = 44.8 bits (92), Expect(3) = 8e-033
Identities = 18/23 (78%), Positives = 21/23 (91%)
Frame = +1 / +3
Query: 274 RVEFNIISGTSMSCPHVSGLAAL 342
RV FNI+SGTSMSCP V+G+AAL
Sbjct: 621 RVGFNILSGTSMSCPDVAGVAAL 689
>gb|BU979636.1|BU979636 HA16M15r HA Hordeum vulgare subsp. vulgare cDNA clone HA16M15
5-PRIME, mRNA sequence
Length = 520
Score = 82.2 bits (174), Expect(2) = 1e-032
Identities = 34/79 (43%), Positives = 48/79 (60%)
Frame = +1 / +2
Query: 10 PATMVGQKFGDKIRYYVQTDPSPTATIVFRGTVIGKSPSAPRVAAFSSRGPNYRAPEILK 189
PA +G+ D + Y+ + P ++F + AP+V FSSRGP+ A E+LK
Sbjct: 152 PALFLGRAARDVLINYLSSTAYPVGRLIFECATVIGKNRAPKVVGFSSRGPSSAAVELLK 331
Query: 190 PDVIAPGVNILAAWTGAAS 246
PDV+APG+N+LAAWTG S
Sbjct: 332 PDVVAPGLNVLAAWTGDRS 388
Score = 77.2 bits (163), Expect(2) = 1e-032
Identities = 28/39 (71%), Positives = 37/39 (94%)
Frame = +1 / +2
Query: 280 EFNIISGTSMSCPHVSGLAALLRQAHPEWSPAAIKSALM 396
+FNIISGTSM+CPHV+G+AALL++ HP+W+PA I+SALM
Sbjct: 404 DFNIISGTSMACPHVAGVAALLKKKHPDWTPAMIRSALM 520
>gb|BU996124.1|BU996124 HM12I06r HM Hordeum vulgare subsp. vulgare cDNA clone HM12I06
5-PRIME, mRNA sequence
Length = 622
Score = 67.2 bits (141), Expect(4) = 2e-031
Identities = 26/35 (74%), Positives = 31/35 (88%)
Frame = +1 / +3
Query: 127 APRVAAFSSRGPNYRAPEILKPDVIAPGVNILAAW 231
AP VAAFSSRGPN +P +LKPD++APG+NILAAW
Sbjct: 207 APIVAAFSSRGPNAASPGVLKPDIMAPGLNILAAW 311
Score = 59.9 bits (125), Expect(4) = 2e-031
Identities = 21/38 (55%), Positives = 31/38 (81%)
Frame = +1 / +1
Query: 328 GLAALLRQAHPEWSPAAIKSALMTTAYNLDNSGETIKD 441
G+ AL+++AHP+WSP+A+KSA+MTT+ DN+G I D
Sbjct: 397 GVVALVKKAHPDWSPSAVKSAIMTTSSTADNAGNPIMD 510
Score = 35.7 bits (72), Expect(4) = 2e-031
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = +1 / +1
Query: 478 GAGHVDPNAALDPRLVYDAG 537
GAGHVD A+DP LVYD G
Sbjct: 544 GAGHVDAAKAVDPGLVYDLG 603
Score = 28.0 bits (55), Expect(4) = 2e-031
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +1 / +3
Query: 283 FNIISGTSMSCPHVS 327
+N+ SGTSM+ PHV+
Sbjct: 351 YNVASGTSMATPHVT 395
>gb|BI949848.1|BI949848 HVSMEl0016H08f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0016H08f, mRNA sequence
Length = 612
Score = 80.4 bits (170), Expect(3) = 3e-031
Identities = 32/51 (62%), Positives = 42/51 (82%)
Frame = +1 / +3
Query: 283 FNIISGTSMSCPHVSGLAALLRQAHPEWSPAAIKSALMTTAYNLDNSGETI 435
F IISGTSM+ PHVSG+AAL++ HP+WSPAAIKSA++TT+ ++N G I
Sbjct: 267 FKIISGTSMATPHVSGVAALIKSLHPDWSPAAIKSAILTTSDAVNNIGTYI 419
Score = 57.1 bits (119), Expect(3) = 3e-031
Identities = 22/37 (59%), Positives = 31/37 (83%)
Frame = +1 / +3
Query: 127 APRVAAFSSRGPNYRAPEILKPDVIAPGVNILAAWTG 237
+P VA+FSSRGP+ + +LKP+++APG+NILAAW G
Sbjct: 150 SPVVASFSSRGPSSISLGVLKPNILAPGLNILAAWPG 260
Score = 34.8 bits (70), Expect(3) = 3e-031
Identities = 13/27 (48%), Positives = 20/27 (74%)
Frame = +1 / +3
Query: 457 ESTPFVRGAGHVDPNAALDPRLVYDAG 537
+++ + RGAGHV+P A +P LVY+ G
Sbjct: 438 KASAYNRGAGHVNPAKAANPGLVYNLG 518
>gb|BU976117.1|BU976117 HA03C18r HA Hordeum vulgare subsp. vulgare cDNA clone HA03C18
5-PRIME, mRNA sequence
Length = 528
Score = 112 bits (241), Expect(2) = 6e-031
Identities = 47/77 (61%), Positives = 58/77 (75%)
Frame = +1 / +1
Query: 226 AWTGAASPTDLDIDSRRVEFNIISGTSMSCPHVSGLAALLRQAHPEWSPAAIKSALMTTA 405
AW+GAASP+ D D RRVE+NIISGTSM+CPHV+G AAL+++ H W+PA I+SALMTTA
Sbjct: 10 AWSGAASPSRSDKDPRRVEYNIISGTSMACPHVAGAAALIKKRHGGWTPAMIRSALMTTA 189
Query: 406 YNLDNSGETIKDLATGV 456
LD G I D + V
Sbjct: 190 GPLDKDGRDIVDSGSAV 240
Score = 40.7 bits (83), Expect(2) = 6e-031
Identities = 17/32 (53%), Positives = 21/32 (65%)
Frame = +1 / +1
Query: 445 ATGVESTPFVRGAGHVDPNAALDPRLVYDAGS 540
A + +TP GAG V P A+DP LVYDAG+
Sbjct: 244 AANMGATPLTAGAGLVLPRLAMDPGLVYDAGT 339
>gb|AL504861.1|AL504861 AL504861 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW06J24V 5', mRNA sequence
Length = 700
Score = 68.1 bits (143), Expect(3) = 6e-029
Identities = 27/48 (56%), Positives = 35/48 (72%)
Frame = +1 / +1
Query: 295 SGTSMSCPHVSGLAALLRQAHPEWSPAAIKSALMTTAYNLDNSGETIK 438
SGTSM+CPHVS + A+L+ H +WSPA IKSA++TTA D G I+
Sbjct: 190 SGTSMACPHVSAVTAMLKSVHRDWSPAMIKSAIVTTASVTDRFGMPIQ 333
Score = 58.5 bits (122), Expect(3) = 6e-029
Identities = 27/52 (51%), Positives = 34/52 (65%)
Frame = +1 / +1
Query: 73 SPTATIVFRGTVIGKSPSAPRVAAFSSRGPNYRAPEILKPDVIAPGVNILAA 228
+P I +++G +P VA FSSRGP+ P ILKPDV APGV+ILAA
Sbjct: 10 NPVVKISPAESIVGNGVLSPIVAMFSSRGPSPAFPGILKPDVTAPGVSILAA 165
Score = 38.0 bits (77), Expect(3) = 6e-029
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +1 / +1
Query: 466 PFVRGAGHVDPNAALDPRLVYD 531
PF G GH+DP A+DP LVYD
Sbjct: 364 PFDFGGGHMDPERAVDPGLVYD 429
>gb|BU973406.1|BU973406 HB24N05r BC Hordeum vulgare subsp. vulgare cDNA clone HB24N05
5-PRIME, mRNA sequence
Length = 554
Score = 81.7 bits (173), Expect(3) = 1e-028
Identities = 32/51 (62%), Positives = 43/51 (84%)
Frame = +1 / +2
Query: 283 FNIISGTSMSCPHVSGLAALLRQAHPEWSPAAIKSALMTTAYNLDNSGETI 435
F IISGTSM+ PHVSG+AAL++ HP+WSPAAIKSA++TT+ ++N G +I
Sbjct: 341 FKIISGTSMATPHVSGVAALIKSLHPDWSPAAIKSAILTTSDAVNNIGTSI 493
Score = 59.4 bits (124), Expect(3) = 1e-028
Identities = 23/37 (62%), Positives = 31/37 (83%)
Frame = +1 / +2
Query: 127 APRVAAFSSRGPNYRAPEILKPDVIAPGVNILAAWTG 237
+P VA+FSSRGP+ + +LKPD++APG+NILAAW G
Sbjct: 224 SPVVASFSSRGPSSISLGVLKPDILAPGLNILAAWPG 334
Score = 22.5 bits (43), Expect(3) = 1e-028
Identities = 7/14 (50%), Positives = 12/14 (85%)
Frame = +1 / +2
Query: 457 ESTPFVRGAGHVDP 498
+++ + RGAGHV+P
Sbjct: 512 KASAYDRGAGHVNP 553
>gb|BU975588.1|BU975588 HB31K03r BC Hordeum vulgare subsp. vulgare cDNA clone HB31K03
5-PRIME, mRNA sequence
Length = 341
Score = 81.7 bits (173), Expect(2) = 2e-027
Identities = 32/51 (62%), Positives = 43/51 (84%)
Frame = +1 / +3
Query: 283 FNIISGTSMSCPHVSGLAALLRQAHPEWSPAAIKSALMTTAYNLDNSGETI 435
F IISGTSM+ PHVSG+AAL++ HP+WSPAAIKSA++TT+ ++N G +I
Sbjct: 177 FKIISGTSMATPHVSGVAALIKSLHPDWSPAAIKSAILTTSDAVNNIGTSI 329
Score = 59.4 bits (124), Expect(2) = 2e-027
Identities = 23/37 (62%), Positives = 31/37 (83%)
Frame = +1 / +3
Query: 127 APRVAAFSSRGPNYRAPEILKPDVIAPGVNILAAWTG 237
+P VA+FSSRGP+ + +LKPD++APG+NILAAW G
Sbjct: 60 SPVVASFSSRGPSSISLGVLKPDILAPGLNILAAWPG 170
>gb|BJ447567.1|BJ447567 BJ447567 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak16f04 5', mRNA sequence
Length = 628
Score = 71.3 bits (150), Expect(2) = 3e-027
Identities = 30/59 (50%), Positives = 39/59 (66%)
Frame = +1 / +2
Query: 52 YYVQTDPSPTATIVFRGTVIGKSPSAPRVAAFSSRGPNYRAPEILKPDVIAPGVNILAA 228
Y++ SP A I TV GK P+VA+FSSRGP+ P+++KPD+ APG NILAA
Sbjct: 269 YFLDATSSPVAKIEPARTVTGKEILGPKVASFSSRGPSRDYPDVIKPDIAAPGANILAA 445
Score = 69.9 bits (147), Expect(2) = 3e-027
Identities = 26/40 (65%), Positives = 33/40 (82%)
Frame = +1 / +2
Query: 283 FNIISGTSMSCPHVSGLAALLRQAHPEWSPAAIKSALMTT 402
+ +SGTSM+ PHVSG+ ALL+ HP WSPAAIKSA++TT
Sbjct: 458 YKFMSGTSMAAPHVSGIVALLKAQHPHWSPAAIKSAIITT 577
>gb|BQ759134.1|BQ759134 EBma07_SQ003_L21_R maternal, 21 DPA, no treatment, cv Optic, EBma07
Hordeum vulgare subsp. vulgare cDNA clone
EBma07_SQ003_L21 5', mRNA sequence
Length = 363
Score = 76.7 bits (162), Expect(2) = 3e-026
Identities = 28/47 (59%), Positives = 40/47 (85%)
Frame = +1 / +3
Query: 280 EFNIISGTSMSCPHVSGLAALLRQAHPEWSPAAIKSALMTTAYNLDN 420
+FN++SGTSM+CPHV+G AA ++ +P WSPAAI+SA+MTT+ L+N
Sbjct: 213 QFNLVSGTSMACPHVAGAAATVKAWNPTWSPAAIRSAIMTTSTQLNN 353
Score = 60.3 bits (126), Expect(2) = 3e-026
Identities = 26/40 (65%), Positives = 30/40 (75%)
Frame = +1 / +3
Query: 127 APRVAAFSSRGPNYRAPEILKPDVIAPGVNILAAWTGAAS 246
AP VA FSSRGP+ + ILKPDV APGVNILA+W +S
Sbjct: 66 APVVAYFSSRGPSAQTGNILKPDVAAPGVNILASWIPTSS 185
>gb|CA026811.1|CA026811 HZ57A15r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ57A15
5-PRIME, mRNA sequence
Length = 449
Score = 117 bits (251), Expect = 6e-026
Identities = 46/79 (58%), Positives = 61/79 (77%)
Frame = +1 / +3
Query: 1 HLVPATMVGQKFGDKIRYYVQTDPSPTATIVFRGTVIGKSPSAPRVAAFSSRGPNYRAPE 180
H++P + V +KI+ Y++T SP AT+VF GTV+G+SP +PR+A+FSSRGP+ PE
Sbjct: 213 HVIPVSAVTFSAAEKIKKYLRTQASPVATMVFHGTVVGRSPPSPRMASFSSRGPSRLVPE 392
Query: 181 ILKPDVIAPGVNILAAWTG 237
ILKPDV APGV+ILAAW G
Sbjct: 393 ILKPDVTAPGVDILAAWAG 449
>gb|BQ459843.1|BQ459843 HA07O13r HA Hordeum vulgare subsp. vulgare cDNA clone HA07O13
5-PRIME, mRNA sequence
Length = 561
Score = 94.5 bits (201), Expect(2) = 4e-025
Identities = 36/54 (66%), Positives = 47/54 (87%)
Frame = +1 / +1
Query: 280 EFNIISGTSMSCPHVSGLAALLRQAHPEWSPAAIKSALMTTAYNLDNSGETIKD 441
+FNIISGTSM+CPHV+G+AALL++ HP+W+PA I+SALMTTA +DN+G I D
Sbjct: 34 DFNIISGTSMACPHVAGVAALLKKKHPDWTPAMIRSALMTTAKTVDNTGAPIVD 195
Score = 39.4 bits (80), Expect(2) = 4e-025
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = +1 / +1
Query: 460 STPFVRGAGHVDPNAALDPRLVYDAGS 540
+TP V GAG V P +A+ P LVYDAG+
Sbjct: 220 ATPLVAGAGMVLPQSAMHPGLVYDAGT 300
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.316 0.132 0.393
Matrix: BLOSUM62
Number of Hits to DB: 196,994,948
Number of Sequences: 312970
Number of extensions: 2717079
Number of successful extensions: 76884
Number of sequences better than 1.0e-020: 80
length of database: 58,378,179
effective HSP length: 51
effective length of database: 42,416,709
effective search space used: 5514172170
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.6 bits)