TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 6293482.2.1
(2042 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BM816874.1|BM816874 HB105E09_SK.ab1 HB Hordeum vulgare s... 193 1e-077
gb|AV936726.1|AV936726 AV936726 K. Sato unpublished cDNA li... 280 2e-074
gb|BF628635.2|BF628635 HVSMEb0006N15f Hordeum vulgare seedl... 254 7e-074
gb|BJ546119.1|BJ546119 BJ546119 K. Sato unpublished cDNA li... 274 2e-072
gb|BJ545019.1|BJ545019 BJ545019 K. Sato unpublished cDNA li... 221 2e-072
gb|BG301188.1|BG301188 HVSMEb0019N18f Hordeum vulgare seedl... 154 3e-070
gb|BJ544646.1|BJ544646 BJ544646 K. Sato unpublished cDNA li... 229 6e-070
gb|BJ466861.1|BJ466861 BJ466861 K. Sato unpublished cDNA li... 264 9e-070
gb|BF627742.1|BF627742 HVSMEb0005K21f Hordeum vulgare seedl... 243 6e-069
gb|BM816704.1|BM816704 HB01G04_T3.ab1 HB Hordeum vulgare su... 262 6e-069
gb|BF261803.3|BF261803 HV_CEa0002E08f Hordeum vulgare seedl... 239 2e-066
gb|AV936356.1|AV936356 AV936356 K. Sato unpublished cDNA li... 252 5e-066
gb|AV932347.1|AV932347 AV932347 K. Sato unpublished cDNA li... 251 1e-065
gb|AV930421.1|AV930421 AV930421 K. Sato unpublished cDNA li... 250 2e-065
gb|BJ548006.1|BJ548006 BJ548006 K. Sato unpublished cDNA li... 250 2e-065
gb|AV919647.1|AV919647 AV919647 K. Sato unpublished cDNA li... 248 6e-065
gb|AV921112.1|AV921112 AV921112 K. Sato unpublished cDNA li... 248 1e-064
gb|AV913934.1|AV913934 AV913934 K. Sato unpublished cDNA li... 247 2e-064
gb|AV934261.1|AV934261 AV934261 K. Sato unpublished cDNA li... 247 2e-064
gb|AV936516.1|AV936516 AV936516 K. Sato unpublished cDNA li... 246 4e-064
gb|BE420993.1|BE420993 HWM004.F10 ITEC HWM Barley Leaf Libr... 241 1e-062
gb|AV936349.1|AV936349 AV936349 K. Sato unpublished cDNA li... 239 3e-062
gb|BJ548998.1|BJ548998 BJ548998 K. Sato unpublished cDNA li... 239 3e-062
gb|BJ548386.1|BJ548386 BJ548386 K. Sato unpublished cDNA li... 238 6e-062
gb|BJ547960.1|BJ547960 BJ547960 K. Sato unpublished cDNA li... 237 2e-061
gb|BJ548975.1|BJ548975 BJ548975 K. Sato unpublished cDNA li... 221 2e-061
gb|AV918301.1|AV918301 AV918301 K. Sato unpublished cDNA li... 236 4e-061
gb|AV915851.1|AV915851 AV915851 K. Sato unpublished cDNA li... 165 2e-060
gb|AV915997.1|AV915997 AV915997 K. Sato unpublished cDNA li... 232 8e-060
gb|BU968861.1|BU968861 HB08M23r BC Hordeum vulgare subsp. v... 231 1e-059
gb|BQ471556.1|BQ471556 HV02M13r HV Hordeum vulgare subsp. v... 229 4e-059
gb|AV918176.1|AV918176 AV918176 K. Sato unpublished cDNA li... 222 4e-057
gb|AV916927.1|AV916927 AV916927 K. Sato unpublished cDNA li... 219 5e-056
gb|AV934098.1|AV934098 AV934098 K. Sato unpublished cDNA li... 167 1e-055
gb|BJ546501.1|BJ546501 BJ546501 K. Sato unpublished cDNA li... 217 2e-055
gb|AV917596.1|AV917596 AV917596 K. Sato unpublished cDNA li... 182 7e-054
gb|BJ453643.1|BJ453643 BJ453643 K. Sato unpublished cDNA li... 201 2e-053
gb|AV922405.1|AV922405 AV922405 K. Sato unpublished cDNA li... 209 6e-053
gb|BG344914.2|BG344914 HVSMEg0016N10f Hordeum vulgare pre-a... 199 3e-052
gb|AV914567.1|AV914567 AV914567 K. Sato unpublished cDNA li... 183 6e-052
gb|BE196002.1|BE196002 HVSMEh0091B12f Hordeum vulgare 5-45 ... 204 1e-051
gb|AV935198.1|AV935198 AV935198 K. Sato unpublished cDNA li... 204 2e-051
gb|BE214490.1|BE214490 HV_CEb0003J19f Hordeum vulgare seedl... 162 2e-051
gb|AY989887.1| Hordeum vulgare subsp. vulgare cytochrome P4... 82 4e-051
gb|CA017939.1|CA017939 HV06O02r HV Hordeum vulgare subsp. v... 200 2e-050
gb|BG301073.1|BG301073 HVSMEb0019H09f Hordeum vulgare seedl... 181 2e-050
gb|BJ463196.1|BJ463196 BJ463196 K. Sato unpublished cDNA li... 164 3e-050
emb|AJ495774.1|HVU495774 Hordeum vulgare partial mRNA for p... 82 4e-050
gb|BF621561.1|BF621561 HVSMEa0011G21f Hordeum vulgare seedl... 172 8e-050
gb|BJ464184.1|BJ464184 BJ464184 K. Sato unpublished cDNA li... 198 1e-049
gb|AV925268.1|AV925268 AV925268 K. Sato unpublished cDNA li... 196 3e-049
gb|BJ547149.1|BJ547149 BJ547149 K. Sato unpublished cDNA li... 161 4e-049
gb|BJ452936.1|BJ452936 BJ452936 K. Sato unpublished cDNA li... 196 4e-049
gb|AV912854.1|AV912854 AV912854 K. Sato unpublished cDNA li... 103 5e-048
gb|BF065379.1|BF065379 HV_CEb0012E10f Hordeum vulgare seedl... 191 1e-047
gb|BJ549009.1|BJ549009 BJ549009 K. Sato unpublished cDNA li... 190 3e-047
gb|AV934105.1|AV934105 AV934105 K. Sato unpublished cDNA li... 187 2e-046
gb|BI952196.1|BI952196 HVSMEm0004P09f Hordeum vulgare green... 153 2e-045
gb|AV927306.1|AV927306 AV927306 K. Sato unpublished cDNA li... 182 8e-045
gb|BJ465003.1|BJ465003 BJ465003 K. Sato unpublished cDNA li... 182 8e-045
gb|AV913156.1|AV913156 AV913156 K. Sato unpublished cDNA li... 111 2e-044
gb|BG299744.1|BG299744 HVSMEa0021K06f Hordeum vulgare seedl... 180 2e-044
gb|BE602159.2|BE602159 HVSMEh0102M13f Hordeum vulgare 5-45 ... 174 2e-043
gb|BJ546669.1|BJ546669 BJ546669 K. Sato unpublished cDNA li... 102 3e-043
gb|BQ461073.1|BQ461073 HE01E18r HE Hordeum vulgare subsp. v... 157 5e-043
gb|AV920965.1|AV920965 AV920965 K. Sato unpublished cDNA li... 176 5e-043
gb|AV921548.1|AV921548 AV921548 K. Sato unpublished cDNA li... 172 6e-042
gb|CA015705.1|CA015705 HV12J09u HV Hordeum vulgare subsp. v... 172 6e-042
gb|AV917238.1|AV917238 AV917238 K. Sato unpublished cDNA li... 171 9e-042
gb|AV913374.1|AV913374 AV913374 K. Sato unpublished cDNA li... 168 1e-040
gb|AV918673.1|AV918673 AV918673 K. Sato unpublished cDNA li... 168 1e-040
gb|BQ471267.1|BQ471267 HV01P03T HV Hordeum vulgare subsp. v... 79 2e-040
gb|BJ461185.1|BJ461185 BJ461185 K. Sato unpublished cDNA li... 166 3e-040
gb|AV930901.1|AV930901 AV930901 K. Sato unpublished cDNA li... 164 1e-039
gb|AV918446.1|AV918446 AV918446 K. Sato unpublished cDNA li... 133 4e-039
gb|AV917230.1|AV917230 AV917230 K. Sato unpublished cDNA li... 88 1e-038
gb|CA018489.1|CA018489 HV08M10r HV Hordeum vulgare subsp. v... 135 1e-038
gb|CA009631.1|CA009631 HU14K18r HU Hordeum vulgare subsp. v... 121 2e-038
gb|BJ464493.1|BJ464493 BJ464493 K. Sato unpublished cDNA li... 160 3e-038
gb|AV919454.1|AV919454 AV919454 K. Sato unpublished cDNA li... 88 4e-038
gb|BJ466813.1|BJ466813 BJ466813 K. Sato unpublished cDNA li... 88 6e-037
gb|BJ464883.1|BJ464883 BJ464883 K. Sato unpublished cDNA li... 79 6e-036
gb|BJ547848.1|BJ547848 BJ547848 K. Sato unpublished cDNA li... 150 3e-035
gb|CA019109.1|CA019109 HV10M21r HV Hordeum vulgare subsp. v... 131 3e-035
gb|BJ464550.1|BJ464550 BJ464550 K. Sato unpublished cDNA li... 149 7e-035
gb|CA013705.1|CA013705 HT09E03r HT Hordeum vulgare subsp. v... 62 9e-035
gb|AV923778.1|AV923778 AV923778 K. Sato unpublished cDNA li... 127 5e-034
gb|BJ460485.1|BJ460485 BJ460485 K. Sato unpublished cDNA li... 138 6e-034
gb|BJ547119.1|BJ547119 BJ547119 K. Sato unpublished cDNA li... 111 6e-034
gb|CA019622.1|CA019622 HV12J09r HV Hordeum vulgare subsp. v... 144 1e-033
gb|CA006248.1|CA006248 HU14K18u HU Hordeum vulgare subsp. v... 121 8e-033
gb|BG300331.1|BG300331 HVSMEb0012I19f Hordeum vulgare seedl... 111 6e-031
gb|BF627303.3|BF627303 HVSMEb0004I01f Hordeum vulgare seedl... 88 1e-030
gb|AV922397.1|AV922397 AV922397 K. Sato unpublished cDNA li... 88 1e-030
gb|BJ466913.1|BJ466913 BJ466913 K. Sato unpublished cDNA li... 88 1e-030
gb|AV919113.1|AV919113 AV919113 K. Sato unpublished cDNA li... 88 2e-030
gb|AV917809.1|AV917809 AV917809 K. Sato unpublished cDNA li... 88 2e-030
gb|BF629412.3|BF629412 HVSMEb0012D18f Hordeum vulgare seedl... 62 2e-030
gb|AV919240.1|AV919240 AV919240 K. Sato unpublished cDNA li... 88 2e-030
gb|AV922497.1|AV922497 AV922497 K. Sato unpublished cDNA li... 88 2e-030
gb|BF253916.1|BF253916 HVSMEf0002H19f Hordeum vulgare seedl... 131 1e-029
gb|BG416486.2|BG416486 HVSMEk0012I14f Hordeum vulgare testa... 80 1e-029
gb|AU252315.1|AU252315 AU252315 salt-stressed barley root c... 84 1e-028
gb|AV917240.1|AV917240 AV917240 K. Sato unpublished cDNA li... 88 2e-027
gb|AV917724.1|AV917724 AV917724 K. Sato unpublished cDNA li... 88 2e-027
gb|AV918924.1|AV918924 AV918924 K. Sato unpublished cDNA li... 88 2e-027
gb|AV922407.1|AV922407 AV922407 K. Sato unpublished cDNA li... 88 2e-027
gb|BJ465805.1|BJ465805 BJ465805 K. Sato unpublished cDNA li... 88 2e-027
gb|BJ463386.1|BJ463386 BJ463386 K. Sato unpublished cDNA li... 67 3e-027
gb|BG301293.2|BG301293 HVSMEb0020I08f Hordeum vulgare seedl... 123 4e-027
gb|BQ664118.1|BQ664118 HV01P03w HV Hordeum vulgare subsp. v... 88 1e-026
gb|AV925764.1|AV925764 AV925764 K. Sato unpublished cDNA li... 102 1e-026
gb|CA029164.1|CA029164 HZ64G11r HZ Hordeum vulgare subsp. v... 121 1e-026
gb|BF066135.3|BF066135 HV_CEb0014P04f Hordeum vulgare seedl... 62 2e-026
gb|BE216646.1|BE216646 HV_CEb0011B08f Hordeum vulgare seedl... 117 2e-026
gb|AV928880.1|AV928880 AV928880 K. Sato unpublished cDNA li... 120 3e-026
gb|BM443957.2|BM443957 EBem09_SQ002_E09_R embryo, 1 Day ger... 101 5e-026
gb|AU252310.1|AU252310 AU252310 salt-stressed barley root c... 73 7e-026
gb|AJ434580.1|AJ434580 AJ434580 S00002 Hordeum vulgare subs... 77 7e-026
gb|AU252324.1|AU252324 AU252324 salt-stressed barley root c... 78 2e-025
gb|BJ545191.1|BJ545191 BJ545191 K. Sato unpublished cDNA li... 95 2e-025
gb|AV923900.1|AV923900 AV923900 K. Sato unpublished cDNA li... 116 4e-025
gb|BM101180.2|BM101180 EBpi01_SQ003_C01_R pistil, 1 DPA, no... 88 5e-025
gb|AV922276.1|AV922276 AV922276 K. Sato unpublished cDNA li... 115 8e-025
gb|BI958239.1|BI958239 HVSMEn0014A11f Hordeum vulgare rachi... 82 9e-025
gb|CA016903.1|CA016903 HV05M12u HV Hordeum vulgare subsp. v... 82 2e-024
gb|BU999462.1|BU999462 HI14J11r HI Hordeum vulgare subsp. v... 65 4e-024
gb|BJ475646.1|BJ475646 BJ475646 K. Sato unpublished cDNA li... 83 6e-024
gb|BF259778.3|BF259778 HVSMEf0020D20f Hordeum vulgare seedl... 74 8e-024
gb|BE519743.1|BE519743 HV_CEb0021A21f Hordeum vulgare seedl... 75 8e-024
gb|BJ466231.1|BJ466231 BJ466231 K. Sato unpublished cDNA li... 88 8e-024
gb|CA012725.1|CA012725 HT06E05r HT Hordeum vulgare subsp. v... 98 2e-023
gb|AV920535.1|AV920535 AV920535 K. Sato unpublished cDNA li... 88 2e-023
gb|BE519751.1|BE519751 HV_CEb0021B09f Hordeum vulgare seedl... 105 3e-023
gb|AU252309.1|AU252309 AU252309 salt-stressed barley root c... 104 4e-023
gb|CA019349.1|CA019349 HV11L11r HV Hordeum vulgare subsp. v... 67 2e-022
gb|CA017757.1|CA017757 HV06C16r HV Hordeum vulgare subsp. v... 88 2e-022
gb|BF260074.2|BF260074 HVSMEf0021A16f Hordeum vulgare seedl... 107 2e-022
gb|AV912967.1|AV912967 AV912967 K. Sato unpublished cDNA li... 60 3e-022
gb|BQ471971.1|BQ471971 HV04A16r HV Hordeum vulgare subsp. v... 88 5e-022
gb|BF627396.2|BF627396 HVSMEb0004L24f Hordeum vulgare seedl... 77 8e-022
gb|BF628382.2|BF628382 HVSMEb0003O04f Hordeum vulgare seedl... 56 8e-022
gb|BI956493.1|BI956493 HVSMEn0003M04f Hordeum vulgare rachi... 74 8e-022
gb|BE215637.1|BE215637 HV_CEb0007H18f Hordeum vulgare seedl... 84 2e-021
gb|BF624213.1|BF624213 HVSMEa0012L22f Hordeum vulgare seedl... 77 2e-021
gb|CA017637.1|CA017637 HV05M12r HV Hordeum vulgare subsp. v... 104 2e-021
gb|CB880227.1|CB880227 HM05O04w HM Hordeum vulgare subsp. v... 69 3e-021
gb|BF618482.2|BF618482 HVSMEc0005N02f Hordeum vulgare seedl... 82 3e-021
gb|AU252316.1|AU252316 AU252316 salt-stressed barley root c... 57 9e-021
>gb|BM816874.1|BM816874 HB105E09_SK.ab1 HB Hordeum vulgare subsp. vulgare cDNA clone
HB105E09_SK.ab1 similar to Steroid
17-alpha-monooxygenase,Unspecific monooxygenase, mRNA
sequence
Length = 884
Score = 193 bits (416), Expect(2) = 1e-077
Identities = 70/121 (57%), Positives = 95/121 (78%)
Frame = -2 / +2
Query: 640 VAGYTIPANTRVVVNAWALGRHSGYWERENEFVPERFLSGDVAGGVDLKPNEFQFLAFGS 461
+ GY +PA T V++N WA+GR S YWE EF+PERFL A GV+ K N+FQFL FG+
Sbjct: 374 IDGYMVPAGTHVLINVWAIGRDSSYWEEAEEFIPERFLDEGSAAGVNFKGNDFQFLPFGA 553
Query: 460 GRRMCPGVHSASATIEAMLSNLMYRFDWQLPAGMKAEDVDMTEVFGITVSRKEKLLLVPQ 281
GRRMCPG++ AT+E ML+NLMY FDW+LP G++ +D++MTE+FG+T+ RKEKL+LVP+
Sbjct: 554 GRRMCPGINLGIATVELMLANLMYHFDWELPLGVERKDINMTELFGLTMRRKEKLMLVPK 733
Query: 280 A 278
+
Sbjct: 734 S 736
Score = 118 bits (252), Expect(2) = 1e-077
Identities = 51/91 (56%), Positives = 71/91 (78%)
Frame = -2 / +2
Query: 967 DFIYVLLSLQKEYGLTRDHIKAILIDMFEAGTDTSYMTLEFAMTELIRKPHLMKKLQEEV 788
+F+ +LLS+Q EYGLT++ +KA+L D+F T+TS TLEF + EL+R P L+ KLQ+EV
Sbjct: 47 NFVDILLSVQMEYGLTKEDMKALLTDVFFGSTETSSNTLEFTLAELVRSPCLIGKLQDEV 226
Query: 787 RRNVPAGQEMVTEDNLPGMTDLKAVIKETLR 695
R VP+GQE+VTE ++ MT L+AVIKE+LR
Sbjct: 227 RSIVPSGQEVVTEADISKMTYLRAVIKESLR 319
Score = 109 bits (233), Expect(2) = 1e-041
Identities = 55/118 (46%), Positives = 68/118 (57%)
Frame = +3 / -3
Query: 285 GTRSSFSFLETVIPNTSVMSTSSAFIPAGSCQSNRYMRLDSIASMVADAEWTPGHILRPD 464
GT SFSF V PN SV+ S P+G+ QS Y++ +I+S VA + PGHILRP
Sbjct: 729 GTNISFSFRRMVSPNNSVILISFLSTPSGNSQSKWYIKFANISSTVAIPRFIPGHILRPA 550
Query: 465 PNARNWNSLGLRSTPPATSPLRNLSGTNSFSRSQ*PLWRPSAQALTTTRVLAGMV*PA 638
PN +NW S L+ TP A RNLSG NS + SQ* P A L T V AG + P+
Sbjct: 549 PNGKNWKSFPLKLTPAALPSSRNLSGMNSSASSQ*LESLPMAHTLIKTCVPAGTMYPS 376
Score = 91.3 bits (193), Expect(2) = 7e-023
Identities = 39/76 (51%), Positives = 51/76 (67%)
Frame = +2 / -2
Query: 287 D*EQLLLPRDRDPKHLGHVHVLRLHPRRQLPVEPVHEVGQHRLDGRGRRVDPRAHPPPGP 466
+* + LLP PK L H+ + L+P+RQLPVE VH+V QH+L+GR V R HP P
Sbjct: 727 N*HKFLLPAHG*PK*LCHIDIFPLNPKRQLPVEMVHQVCQHKLNGRDSEVYTRTHPASCP 548
Query: 467 ERQELELVGLEVDAAG 514
ERQELE++ LE+D G
Sbjct: 547 ERQELEIIPLEIDTRG 500
Score = 82.2 bits (173), Expect(2) = 1e-041
Identities = 42/85 (49%), Positives = 51/85 (60%)
Frame = +3 / -3
Query: 711 MTALRSVMPGRLSSVTISCPAGTFRRTSSCSFFIRCGFRMSSVMANSNVMYEVSVPASNM 890
MTALR V+ +SVT SCP GT TSSCSF I+ G SS NS V+ +VSV N
Sbjct: 303 MTALRYVILLMSASVTTSCPLGTILLTSSCSFPIKHGLLTSSAKVNSRVLDDVSVEPKNT 124
Query: 891 SIKIALIWSLVRPYSF*RDSNTYMK 965
S++ A + S VRPYS * D+ K
Sbjct: 123 SVRRAFMSSFVRPYSI*TDNRISTK 49
Score = 41.4 bits (84), Expect(2) = 7e-023
Identities = 20/50 (40%), Positives = 26/50 (52%)
Frame = +2 / -2
Query: 704 LLDDGLEVGHAGEVVLGDHLLPRRHVPPHFFLQLLHQVWLPYELRHGELQ 853
LL D V H V GD+ L R+ P+ L L +Q W P+EL GE +
Sbjct: 310 LLYDCS*VCHFANVSFGDNFLSTRYDTPYLVL*LPNQAWAPHELSQGEFE 161
>gb|AV936726.1|AV936726 AV936726 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal5k12 3', mRNA sequence
Length = 774
Score = 280 bits (605), Expect = 2e-074
Identities = 115/219 (52%), Positives = 155/219 (70%)
Frame = -2 / -3
Query: 934 EYGLTRDHIKAILIDMFEAGTDTSYMTLEFAMTELIRKPHLMKKLQEEVRRNVPAGQEMV 755
EY LTR+H+KA+L D+F DTS LEF + EL+R+PH+M+KLQ+EVR +P GQE++
Sbjct: 772 EYALTREHMKALLTDVFFGAIDTSANVLEFTLAELMRRPHMMEKLQDEVRGILPQGQEII 593
Query: 754 TEDNLPGMTDLKAVIKETLRXXXXXXXXXXHYSLDACEVAGYTIPANTRVVVNAWALGRH 575
+E ++ MT L+AVIKE+LR H ++ C + GY +PA TRVVVNAWA+GR
Sbjct: 592 SETDMNNMTYLRAVIKESLRLHPVAPLLAPHLAMADCIIDGYIVPAGTRVVVNAWAIGRD 413
Query: 574 SGYWERENEFVPERFLSGDVAGGVDLKPNEFQFLAFGSGRRMCPGVHSASATIEAMLSNL 395
WE EF+PERF ++ K N+FQFL FG+GRRMCPG++ A +E ML+NL
Sbjct: 412 PSSWEYPEEFIPERFTDEGSTMHINFKGNDFQFLPFGAGRRMCPGMNLGIANVELMLANL 233
Query: 394 MYRFDWQLPAGMKAEDVDMTEVFGITVSRKEKLLLVPQA 278
+ FDW+LP G+ +D+DMTEVFG+TV RKEKLLLVP++
Sbjct: 232 VCHFDWELPLGVGRKDIDMTEVFGLTVRRKEKLLLVPKS 116
Score = 94.1 bits (199), Expect(2) = 2e-036
Identities = 49/118 (41%), Positives = 60/118 (50%)
Frame = +3 / +3
Query: 582 PSAQALTTTRVLAGMV*PATSQAXXXXXXXXXXXXXXXXXXXLMTALRSVMPGRLSSVTI 761
P A ALTTTRV AG + P+ Q+ MTALR V+ S+ I
Sbjct: 420 PMAHALTTTRVPAGTMYPSMMQSAMARCGARRGATGCSRSDSFMTALRYVILFMSVSLII 599
Query: 762 SCPAGTFRRTSSCSFFIRCGFRMSSVMANSNVMYEVSVPASNMSIKIALIWSLVRPYS 935
SCP G TSSCSF I CG MSS NS + +VS+ S++ A + SLVR YS
Sbjct: 600 SCPWGKIPLTSSCSFSIMCGLLMSSAKVNSRTLADVSIAPKKTSVRRAFMCSLVRAYS 773
Score = 80.3 bits (169), Expect(2) = 2e-036
Identities = 34/74 (45%), Positives = 48/74 (64%)
Frame = +2 / +2
Query: 284 WD*EQLLLPRDRDPKHLGHVHVLRLHPRRQLPVEPVHEVGQHRLDGRGRRVDPRAHPPPG 463
W+ + LLP D PKHL H++V +P+ + PV+ H+V QH+LD R V RAHPP
Sbjct: 122 WNQQ*FLLPTDG*PKHLCHINVFSPNPKGKFPVKMAHKVCQHKLDIRDSEVHTRAHPPSC 301
Query: 464 PERQELELVGLEVD 505
+ QEL+++ LEVD
Sbjct: 302 SKWQELKIIPLEVD 343
>gb|BF628635.2|BF628635 HVSMEb0006N15f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0006N15f, mRNA sequence
Length = 710
Score = 254 bits (550), Expect(2) = 7e-074
Identities = 107/203 (52%), Positives = 141/203 (69%)
Frame = -2 / +2
Query: 976 DDKDFIYVLLSLQKEYGLTRDHIKAILIDMFEAGTDTSYMTLEFAMTELIRKPHLMKKLQ 797
DD D+I+ LLS+QKEY LTR+ +KA L+ MF AGTDTSY+ +E+AM L++ P LM KLQ
Sbjct: 101 DDTDYIHDLLSIQKEYNLTREQVKAQLVIMFGAGTDTSYIVMEYAMARLMQNPDLMTKLQ 280
Query: 796 EEVRRNVPAGQEMVTEDNLPGMTDLKAVIKETLRXXXXXXXXXXHYSLDACEVAGYTIPA 617
EVR ++P G+ MVTED+L + LKAVIKETLR H ++ C + GYTIP+
Sbjct: 281 AEVRSSIPKGKHMVTEDDLNHLAYLKAVIKETLRLHMPAPLLVPHLAMADCVINGYTIPS 460
Query: 616 NTRVVVNAWALGRHSGYWERENEFVPERFLSGDVAGGVDLKPNEFQFLAFGSGRRMCPGV 437
TRV+VN+ A+ R WE EF+PERF+ G A +D K N F +L FG+GRR+CPG+
Sbjct: 461 GTRVIVNSRAIARDPNSWESAEEFLPERFMQGGSAAAMDYKGNGFLYLPFGTGRRICPGI 640
Query: 436 HSASATIEAMLSNLMYRFDWQLP 368
+ A IE ML+NL+Y FDW+LP
Sbjct: 641 NLAIGAIEIMLTNLVYHFDWKLP 709
Score = 96.4 bits (204), Expect(3) = 6e-034
Identities = 56/125 (44%), Positives = 67/125 (53%)
Frame = +3 / -3
Query: 588 AQALTTTRVLAGMV*PATSQAXXXXXXXXXXXXXXXXXXXLMTALRSVMPGRLSSVTISC 767
A+ LT TRV GMV*P +Q+ L+TA R R SSVT+
Sbjct: 489 ARLLTMTRVPDGMV*PFMTQSAMARWGTRSGAGM*SRSVSLITAFR*ARWLRSSSVTMCF 310
Query: 768 PAGTFRRTSSCSFFIRCGFRMSSVMANSNVMYEVSVPASNMSIKIALIWSLVRPYSF*RD 947
P G TS+CS +R GF MS MA S MY+VSVPA NM AL SLVR YSF* +
Sbjct: 309 PLGMLLLTSACSLVMRSGFCMSRAMAYSITMYDVSVPAPNMITN*ALTCSLVRLYSF*IE 130
Query: 948 SNTYM 962
S ++M
Sbjct: 129 SKSWM 115
Score = 56.5 bits (117), Expect(3) = 6e-034
Identities = 27/59 (45%), Positives = 31/59 (52%)
Frame = +2 / -2
Query: 371 QLPVEPVHEVGQHRLDGRGRRVDPRAHPPPGPERQELELVGLEVDAAGHVPAEEPLRDE 547
QLPVE VHE+G H +G V A+PPP PERQ E V L + E LR E
Sbjct: 706 QLPVEVVHEIG*HDFNGANGEVYTGAYPPPRPERQVEETVPLIIHGRSTAALHEALRQE 530
Score = 44.6 bits (91), Expect(2) = 7e-074
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = -2 / +2
Query: 1081 VACAKTRRVRKRWDDLLDKLIDDHAARMATHQDEDDD 971
+ C + RRV K WDDLL+ LI +H ++ A +D D
Sbjct: 2 MVCGRARRVNKMWDDLLESLIHEHESKPAPALGDDTD 112
Score = 30.9 bits (61), Expect(3) = 6e-034
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +2 / -2
Query: 1010 MVVDELVEEVVPALPDSPGLGARH 1081
M +DE E+VVP L SPG A H
Sbjct: 73 MFMDEAFEQVVPHLVHSPGPAANH 2
>gb|BJ546119.1|BJ546119 BJ546119 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak33l17 3', mRNA sequence
Length = 689
Score = 274 bits (592), Expect = 2e-072
Identities = 113/215 (52%), Positives = 151/215 (70%)
Frame = -2 / -1
Query: 937 KEYGLTRDHIKAILIDMFEAGTDTSYMTLEFAMTELIRKPHLMKKLQEEVRRNVPAGQEM 758
+EY LTR+H+KA+L D+F DTS LEF + EL+R+PH+M+KLQ+EVR VP GQE+
Sbjct: 689 QEYALTREHMKALLTDVFFGAIDTSANVLEFTLAELMRRPHMMEKLQDEVRGIVPQGQEI 510
Query: 757 VTEDNLPGMTDLKAVIKETLRXXXXXXXXXXHYSLDACEVAGYTIPANTRVVVNAWALGR 578
++E ++ MT L+AVIKE+LR H ++ C + GY +PA TRVVVNAWA+GR
Sbjct: 509 ISETDMNNMTYLRAVIKESLRLRPVAPLLAPHLAMADCIIDGYIVPAGTRVVVNAWAIGR 330
Query: 577 HSGYWERENEFVPERFLSGDVAGGVDLKPNEFQFLAFGSGRRMCPGVHSASATIEAMLSN 398
WE EF+PERF ++ K N+FQFL FG+GRRMCPG++ A +E ML+N
Sbjct: 329 DPSSWEYPEEFIPERFTDEGSTMHINFKGNDFQFLPFGAGRRMCPGMNLGIANVELMLAN 150
Query: 397 LMYRFDWQLPAGMKAEDVDMTEVFGITVSRKEKLL 293
L+ FDW+LP G+ +D+DMTEVFG+TV RKEKLL
Sbjct: 149 LVCHFDWELPLGVGRKDIDMTEVFGLTVRRKEKLL 45
Score = 97.3 bits (206), Expect(2) = 1e-036
Identities = 50/118 (42%), Positives = 61/118 (51%)
Frame = +3 / +1
Query: 582 PSAQALTTTRVLAGMV*PATSQAXXXXXXXXXXXXXXXXXXXLMTALRSVMPGRLSSVTI 761
P A ALTTTRV AG + P+ Q+ MTALR V+ S+ I
Sbjct: 334 PMAHALTTTRVPAGTMYPSMMQSAMARCGARRGATGRSRSDSFMTALRYVILFMSVSLII 513
Query: 762 SCPAGTFRRTSSCSFFIRCGFRMSSVMANSNVMYEVSVPASNMSIKIALIWSLVRPYS 935
SCP GT TSSCSF I CG MSS NS + +VS+ S++ A + SLVR YS
Sbjct: 514 SCPWGTIPLTSSCSFSIMCGLLMSSAKVNSRTLADVSIAPKKTSVRRAFMCSLVRAYS 687
Score = 77.6 bits (163), Expect(2) = 1e-036
Identities = 33/68 (48%), Positives = 45/68 (66%)
Frame = +2 / +3
Query: 302 LLPRDRDPKHLGHVHVLRLHPRRQLPVEPVHEVGQHRLDGRGRRVDPRAHPPPGPERQEL 481
LLP D PKHL H++V +P+ + PV+ H+V QH+LD R V RAHPP + QEL
Sbjct: 54 LLPTDG*PKHLCHINVFSPNPKGKFPVKMAHKVCQHKLDIRDSEVHTRAHPPSCSKWQEL 233
Query: 482 ELVGLEVD 505
+++ LEVD
Sbjct: 234 KIIPLEVD 257
>gb|BJ545019.1|BJ545019 BJ545019 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak42e08 5', mRNA sequence
Length = 688
Score = 221 bits (478), Expect(2) = 2e-072
Identities = 91/180 (50%), Positives = 125/180 (69%)
Frame = -2 / +2
Query: 973 DKDFIYVLLSLQKEYGLTRDHIKAILIDMFEAGTDTSYMTLEFAMTELIRKPHLMKKLQE 794
D DF+ ++LS+Q+EY LTR+H+KA+L D+F DTS LEF + EL+R+PH+M+KLQ+
Sbjct: 146 DDDFVDIMLSVQQEYALTREHMKALLTDVFFGAIDTSANVLEFTLAELMRRPHMMEKLQD 325
Query: 793 EVRRNVPAGQEMVTEDNLPGMTDLKAVIKETLRXXXXXXXXXXHYSLDACEVAGYTIPAN 614
EVR VP GQE+++E ++ MT L+AVIKE+LR H ++ C + GY +PA
Sbjct: 326 EVRGIVPQGQEIISETDMNNMTYLRAVIKESLRLRPVAPLLAPHLAMADCIIDGYIVPAG 505
Query: 613 TRVVVNAWALGRHSGYWERENEFVPERFLSGDVAGGVDLKPNEFQFLAFGSGRRMCPGVH 434
TRVVVNAWA+GR WE EF+PERF ++ K N+FQFL FG+GRRMCPG++
Sbjct: 506 TRVVVNAWAIGRDPSSWEYPEEFIPERFTDEGSTMHINFKGNDFQFLPFGAGRRMCPGMN 685
Score = 97.3 bits (206), Expect(3) = 3e-028
Identities = 50/118 (42%), Positives = 61/118 (51%)
Frame = +3 / -2
Query: 582 PSAQALTTTRVLAGMV*PATSQAXXXXXXXXXXXXXXXXXXXLMTALRSVMPGRLSSVTI 761
P A ALTTTRV AG + P+ Q+ MTALR V+ S+ I
Sbjct: 537 PMAHALTTTRVPAGTMYPSMMQSAMARCGARRGATGRSRSDSFMTALRYVILFMSVSLII 358
Query: 762 SCPAGTFRRTSSCSFFIRCGFRMSSVMANSNVMYEVSVPASNMSIKIALIWSLVRPYS 935
SCP GT TSSCSF I CG MSS NS + +VS+ S++ A + SLVR YS
Sbjct: 357 SCPWGTIPLTSSCSFSIMCGLLMSSAKVNSRTLADVSIAPKKTSVRRAFMCSLVRAYS 184
Score = 73.0 bits (153), Expect(2) = 2e-072
Identities = 26/50 (52%), Positives = 35/50 (70%)
Frame = -2 / +2
Query: 1120 YFPRLGRIELVRKVACAKTRRVRKRWDDLLDKLIDDHAARMATHQDEDDD 971
YFP LGR+ +++K CAK +RVR RW DLLD++IDDH ++ D DD
Sbjct: 2 YFPALGRVGVLKKAVCAKAKRVRNRWADLLDQVIDDHVSKRKLASDHKDD 151
Score = 35.0 bits (70), Expect(3) = 3e-028
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = +2 / -1
Query: 1010 MVVDELVEEVVPALPDSPGLGARHLPDELDPAQPREV 1120
M+VD LV+++ P +P S GLG L Q REV
Sbjct: 112 MIVDHLVQQIRPPVPHSFGLGTNRLLKHTYSTQCREV 2
Score = 32.2 bits (64), Expect(3) = 3e-028
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +3 / -2
Query: 441 PGHILRPDPNARNWNSLGLR 500
PGHILRP PN +N S L+
Sbjct: 678 PGHILRPAPNGKN*KSFPLK 619
>gb|BG301188.1|BG301188 HVSMEb0019N18f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0019N18f, mRNA sequence
Length = 925
Score = 154 bits (331), Expect(3) = 3e-070
Identities = 68/126 (53%), Positives = 89/126 (70%)
Frame = -2 / +3
Query: 976 DDKDFIYVLLSLQKEYGLTRDHIKAILIDMFEAGTDTSYMTLEFAMTELIRKPHLMKKLQ 797
DD D+I+ LLS+QKEY LTR+ +KA L+ MF AGTDTSY+ +E+AM L++ P LM KLQ
Sbjct: 297 DDTDYIHDLLSIQKEYNLTREQVKAQLVIMFGAGTDTSYIVMEYAMARLMQNPDLMTKLQ 476
Query: 796 EEVRRNVPAGQEMVTEDNLPGMTDLKAVIKETLRXXXXXXXXXXHYSLDACEVAGYTIPA 617
EVR ++P G+ MVTED+L + LKAVIKETLR H ++ C + GYTIP+
Sbjct: 477 AEVRSSIPKGKHMVTEDDLNHLAYLKAVIKETLRLHMPAPLLVPHLAMADCVINGYTIPS 656
Query: 616 NTRVVV 599
TRV+V
Sbjct: 657 GTRVIV 674
Score = 114 bits (243), Expect(3) = 3e-070
Identities = 44/101 (43%), Positives = 68/101 (67%)
Frame = -2 / +3
Query: 1273 VDMSELLHSFVNNLVCRAVSGKFSMEEGRNRLFRELTDINAGLLGGFHIQDYFPRLGRIE 1094
+D+ ELL +F N+V AV GK ++G +LFREL + N+ L+GGF++ DYFP L +++
Sbjct: 6 LDLGELLSAFSTNIVGHAVCGKSFRQKGHEKLFRELVETNSLLIGGFNVGDYFPELLKLD 185
Query: 1093 LVRKVACAKTRRVRKRWDDLLDKLIDDHAARMATHQDEDDD 971
++R + C + RRV K WDDLL+ LI +H ++ A +D D
Sbjct: 186 IIRWMVCGRARRVNKMWDDLLESLIHEHESKPAPALGDDTD 308
Score = 94.5 bits (200), Expect(3) = 4e-038
Identities = 55/122 (45%), Positives = 65/122 (53%)
Frame = +3 / -1
Query: 597 LTTTRVLAGMV*PATSQAXXXXXXXXXXXXXXXXXXXLMTALRSVMPGRLSSVTISCPAG 776
LT TRV GMV*P +Q+ L+TA R R SSVT+ P G
Sbjct: 676 LTMTRVPDGMV*PFMTQSAMARWGTRSGAGM*SRSVSLITAFR*ARWLRSSSVTMCFPLG 497
Query: 777 TFRRTSSCSFFIRCGFRMSSVMANSNVMYEVSVPASNMSIKIALIWSLVRPYSF*RDSNT 956
TS+CS +R GF MS MA S MY+VSVPA NM AL SLVR YSF* +S +
Sbjct: 496 MLLLTSACSLVMRSGFCMSRAMAYSITMYDVSVPAPNMITN*ALTCSLVRLYSF*IESKS 317
Query: 957 YM 962
+M
Sbjct: 316 WM 311
Score = 81.7 bits (172), Expect(3) = 4e-038
Identities = 41/89 (46%), Positives = 53/89 (59%)
Frame = +2 / -3
Query: 1010 MVVDELVEEVVPALPDSPGLGARHLPDELDPAQPREVVLDVEPSEEARVDVGELPEQPVA 1189
M +DE E+VVP L SPG A H PD++ Q REVV VE + E V + +LPE+ +
Sbjct: 269 MFMDEAFEQVVPHLVHSPGPAANHPPDDVQLQQLREVVPHVEAANEQGVGLHQLPEELLV 90
Query: 1190 AFLHGELAGDGAADEVVDEGVQELAHVDG 1276
AFL LA G A +V EG ++LA V G
Sbjct: 89 AFLPEGLAAHGVAHDVGGEGTEQLAQV*G 3
Score = 44.6 bits (91), Expect(3) = 3e-070
Identities = 17/32 (53%), Positives = 23/32 (71%)
Frame = -2 / +3
Query: 478 FLAFGSGRRMCPGVHSASATIEAMLSNLMYRF 383
+L FG+GRR CPG++ A I ML+NL Y+F
Sbjct: 798 YLPFGTGRRYCPGINLRIAAIGIMLTNLGYQF 893
Score = 29.0 bits (57), Expect(3) = 4e-038
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +2 / -3
Query: 389 VHEVGQHRLDGRGRRVDPRAHPPPGPERQ 475
V ++G+H +G +V A PPP PE Q
Sbjct: 887 VTKIGKHDSNGGNAKVYTGAIPPPXPEGQ 801
>gb|BJ544646.1|BJ544646 BJ544646 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak33l17 5', mRNA sequence
Length = 689
Score = 229 bits (495), Expect(2) = 6e-070
Identities = 95/191 (49%), Positives = 131/191 (68%)
Frame = -2 / +2
Query: 973 DKDFIYVLLSLQKEYGLTRDHIKAILIDMFEAGTDTSYMTLEFAMTELIRKPHLMKKLQE 794
D DF+ ++LS+Q+EY LTR+H+KA+L D+F DTS LEF + EL+R+PH+M+KLQ+
Sbjct: 116 DDDFVDIMLSVQQEYALTREHMKALLTDVFFGAIDTSANVLEFTLAELMRRPHMMEKLQD 295
Query: 793 EVRRNVPAGQEMVTEDNLPGMTDLKAVIKETLRXXXXXXXXXXHYSLDACEVAGYTIPAN 614
EVR VP GQE+++E ++ MT L+AVIKE+LR H ++ C + GY +PA
Sbjct: 296 EVRGIVPQGQEIISETDMNNMTYLRAVIKESLRLRPVAPLLAPHLAMADCIIDGYIVPAG 475
Query: 613 TRVVVNAWALGRHSGYWERENEFVPERFLSGDVAGGVDLKPNEFQFLAFGSGRRMCPGVH 434
TRVVVNAWA+GR WE EF+PERF ++ K N+FQFL FG+GRRMCPG++
Sbjct: 476 TRVVVNAWAIGRDPSSWEYPEEFIPERFTDEGSTMHINFKGNDFQFLPFGAGRRMCPGMN 655
Query: 433 SASATIEAMLS 401
A +E ML+
Sbjct: 656 LGIANVELMLA 688
Score = 97.3 bits (206), Expect(3) = 2e-030
Identities = 50/118 (42%), Positives = 61/118 (51%)
Frame = +3 / -3
Query: 582 PSAQALTTTRVLAGMV*PATSQAXXXXXXXXXXXXXXXXXXXLMTALRSVMPGRLSSVTI 761
P A ALTTTRV AG + P+ Q+ MTALR V+ S+ I
Sbjct: 507 PMAHALTTTRVPAGTMYPSMMQSAMARCGARRGATGRSRSDSFMTALRYVILFMSVSLII 328
Query: 762 SCPAGTFRRTSSCSFFIRCGFRMSSVMANSNVMYEVSVPASNMSIKIALIWSLVRPYS 935
SCP GT TSSCSF I CG MSS NS + +VS+ S++ A + SLVR YS
Sbjct: 327 SCPWGTIPLTSSCSFSIMCGLLMSSAKVNSRTLADVSIAPKKTSVRRAFMCSLVRAYS 154
Score = 56.5 bits (117), Expect(2) = 6e-070
Identities = 20/40 (50%), Positives = 27/40 (67%)
Frame = -2 / +2
Query: 1090 VRKVACAKTRRVRKRWDDLLDKLIDDHAARMATHQDEDDD 971
++K CAK +RVR RW DLLD++IDDH ++ D DD
Sbjct: 2 LKKAVCAKAKRVRNRWADLLDQVIDDHVSKRKLASDHKDD 121
Score = 42.8 bits (87), Expect(3) = 2e-030
Identities = 18/34 (52%), Positives = 23/34 (67%)
Frame = +2 / -2
Query: 404 QHRLDGRGRRVDPRAHPPPGPERQELELVGLEVD 505
QH+LD R V RAHPP + QEL+++ LEVD
Sbjct: 685 QHKLDIRDSEVHTRAHPPSCSKWQELKIIPLEVD 584
Score = 31.8 bits (63), Expect(3) = 2e-030
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +2 / -2
Query: 1010 MVVDELVEEVVPALPDSPGLGARHL 1084
M+VD LV+++ P +P S GLG L
Sbjct: 82 MIVDHLVQQIRPPVPHSFGLGTNRL 8
>gb|BJ466861.1|BJ466861 BJ466861 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags34j09 3', mRNA sequence
Length = 719
Score = 264 bits (572), Expect = 9e-070
Identities = 111/208 (53%), Positives = 145/208 (69%)
Frame = -2 / -3
Query: 907 KAILIDMFEAGTDTSYMTLEFAMTELIRKPHLMKKLQEEVRRNVPAGQEMVTEDNLPGMT 728
KA L+ MFEAGTDTS + LE+AM L++ P +M LQ EVR +P G++ VT+D+L G+
Sbjct: 717 KAQLLIMFEAGTDTSTIVLEYAMVRLMQNPRVMAMLQAEVRSTIPKGKDTVTQDDLHGLP 538
Query: 727 DLKAVIKETLRXXXXXXXXXXHYSLDACEVAGYTIPANTRVVVNAWALGRHSGYWERENE 548
LKAVIKETLR H S+D C + GYTIP+ TR +N +A+ R WE E
Sbjct: 537 YLKAVIKETLRLHMPGPLMVPHLSMDECIINGYTIPSGTRTFINTYAIQRDPSNWESPEE 358
Query: 547 FVPERFLSGDVAGGVDLKPNEFQFLAFGSGRRMCPGVHSASATIEAMLSNLMYRFDWQLP 368
F+PERF+ G A +D K N+FQ+ FGSGRR+CPG++ A+ATI+ ML+NLMY FDW+LP
Sbjct: 357 FMPERFMEGGSAAAMDYKGNDFQYFPFGSGRRICPGINFATATIQLMLTNLMYHFDWKLP 178
Query: 367 AGMKAEDVDMTEVFGITVSRKEKLLLVP 284
+ E ++MTE FG+TV RKEKLLLVP
Sbjct: 177 PESEEEGINMTETFGLTVHRKEKLLLVP 94
Score = 90.4 bits (191), Expect(2) = 1e-028
Identities = 47/94 (50%), Positives = 53/94 (56%)
Frame = +3 / +2
Query: 285 GTRSSFSFLETVIPNTSVMSTSSAFIPAGSCQSNRYMRLDSIASMVADAEWTPGHILRPD 464
GT SFS TV PN SV+ S+ GS QS YMR S++ MVA A+ PGHILRPD
Sbjct: 95 GTSRSFSLRCTVSPNVSVIFMPSSSDSGGSFQSKWYMRFVSMS*MVAVAKLIPGHILRPD 274
Query: 465 PNARNWNSLGLRSTPPATSPLRNLSGTNSFSRSQ 566
PN + W S L S A P N SG NS SQ
Sbjct: 275 PNGKYWKSFPL*SMAAALPPSMNRSGMNSSGLSQ 376
Score = 61.1 bits (127), Expect(2) = 1e-028
Identities = 31/61 (50%), Positives = 38/61 (62%)
Frame = +3 / +2
Query: 708 LMTALRSVMPGRLSSVTISCPAGTFRRTSSCSFFIRCGFRMSSVMANSNVMYEVSVPASN 887
L+TA R P R S VT+S P G TS+CS + GF +S MA S+ M +VSVPASN
Sbjct: 518 LITAFR*GRPWRSSWVTVSFPLGMVLLTSACSMAMTRGFCISRTMAYSSTMVDVSVPASN 697
Query: 888 M 890
M
Sbjct: 698 M 700
>gb|BF627742.1|BF627742 HVSMEb0005K21f Hordeum vulgare seedling shoot EST library HVcDNA0002
(Dehydration stress) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEb0005K21f, mRNA sequence
Length = 818
Score = 243 bits (524), Expect(2) = 6e-069
Identities = 101/192 (52%), Positives = 135/192 (70%)
Frame = -2 / +3
Query: 1582 LMLLRLGAVPTVVVSSPRVAEAVLRTYDHVFSSRPRSLVSDIIMYGATDSCFAPYGDHFR 1403
LML+RLGAVPT+VVS+P A+AVLRT+DHVF+SRP S V+ I+ YG+ D FAPYG H+R
Sbjct: 234 LMLVRLGAVPTLVVSTPAAAQAVLRTHDHVFASRPHSPVAHILFYGSADVVFAPYGHHWR 413
Query: 1402 KARKLVTVHLLNASKVRSQRPAREEEVXXXXXXXXXXXXXREPVDMSELLHSFVNNLVCR 1223
+ +K+ T HLL A KV S R AR+ EV +DMSELL++FV ++VC
Sbjct: 414 QVKKISTTHLLTARKVHSYRHARQHEVNLVLAKVRDAMRAGVALDMSELLNAFVFDIVCH 593
Query: 1222 AVSGKFSMEEGRNRLFRELTDINAGLLGGFHIQDYFPRLGRIELVRKVACAKTRRVRKRW 1043
AV+G E G + FREL + NA L+GGF+++D+FP L ++E+ R + CAK RRV K+W
Sbjct: 594 AVAGNSFRERGTQQHFRELVEANASLIGGFNLEDHFPALVKLEIFRXIVCAKARRVNKQW 773
Query: 1042 DDLLDKLIDDHA 1007
LLD+LID+HA
Sbjct: 774 GRLLDRLIDEHA 809
Score = 84.5 bits (178), Expect(2) = 1e-034
Identities = 42/76 (55%), Positives = 48/76 (63%)
Frame = +3 / -2
Query: 1356 TLLALSRCTVTSFRALRKWSP*GAKHESVAPYMMMSDTRERGREEKTWS*VRSTASATRG 1535
T LA+SR V F R+W P*GAK S P M T E G + TWS VRSTA A G
Sbjct: 460 TFLAVSRWVVEIFLTWRQWWP*GAKTTSAEP*KRMWATGEWGLDANTWSCVRSTACAAAG 281
Query: 1536 DETTTVGTAPRRSSIR 1583
ETT+VGTAPRR+S+R
Sbjct: 280 VETTSVGTAPRRTSMR 233
Score = 83.5 bits (176), Expect(2) = 1e-034
Identities = 42/99 (42%), Positives = 58/99 (58%)
Frame = +2 / -1
Query: 1004 GRMVVDELVEEVVPALPDSPGLGARHLPDELDPAQPREVVLDVEPSEEARVDVGELPEQP 1183
GRM +DE +E+ P SPGLGA + ++ Q REVVL VE ++E V + +LPE
Sbjct: 812 GRMFIDEPIEQSSPLFVYSPGLGANNXSEDFQLHQCREVVLQVEAADERGVGLHQLPEVL 633
Query: 1184 VAAFLHGELAGDGAADEVVDEGVQELAHVDGLPRGGGAA 1300
++ L +A G A +V DEGV++LAHV G G A
Sbjct: 632 LSPSLPERIACHGVAHDVEDEGVEQLAHV*GNACAHGVA 516
Score = 40.0 bits (81), Expect(2) = 6e-069
Identities = 15/30 (50%), Positives = 22/30 (73%)
Frame = -2 / +3
Query: 1660 IIGHLHLMGDIPYVSLAALATRYGPDLMLL 1571
+IGHLH +G +P+VSL LA +G D ++L
Sbjct: 153 VIGHLHQVGPLPHVSLRHLAAEHGRDGLML 242
>gb|BM816704.1|BM816704 HB01G04_T3.ab1 HB Hordeum vulgare subsp. vulgare cDNA clone
HB01G04_T3.ab1 similar to Steroid
17-alpha-monooxygenase,Unspecific monooxygenase, mRNA
sequence
Length = 840
Score = 262 bits (566), Expect = 6e-069
Identities = 109/221 (49%), Positives = 152/221 (68%)
Frame = -2 / +1
Query: 1393 KLVTVHLLNASKVRSQRPAREEEVXXXXXXXXXXXXXREPVDMSELLHSFVNNLVCRAVS 1214
+LVT H+L+ KVRS R A EE VDMSELL++F N + CR VS
Sbjct: 1 ELVTTHMLSVKKVRSFRSAAIEEASMAMAKINEAAIAGATVDMSELLNAFSNGMACRIVS 180
Query: 1213 GKFSMEEGRNRLFRELTDINAGLLGGFHIQDYFPRLGRIELVRKVACAKTRRVRKRWDDL 1034
GKF ++ GR++LFREL + ++ LLGGF++++YFP LGR+ ++++ CAK RVR RW DL
Sbjct: 181 GKFFLQNGRSKLFRELIEDSSRLLGGFNLEEYFPSLGRVGVLKRAVCAKAERVRDRWADL 360
Query: 1033 LDKLIDDHAARMATHQDEDDDKDFIYVLLSLQKEYGLTRDHIKAILIDMFEAGTDTSYMT 854
LDK+ID +++ + D + D DF+ +LLS+Q+EY LTR+H+KA+L D+F GTDTS
Sbjct: 361 LDKVIDHRVSKLKSAVDHNKDGDFVDILLSVQQEYDLTREHMKALLTDVFIGGTDTSSNV 540
Query: 853 LEFAMTELIRKPHLMKKLQEEVRRNVPAGQEMVTEDNLPGM 731
LEF M EL+R+P M KLQ+EVR VP GQE+V+E ++ M
Sbjct: 541 LEFTMAELMRRPEFMGKLQDEVRSIVPRGQEIVSETDMNNM 663
Score = 79.4 bits (167), Expect(3) = 5e-028
Identities = 38/72 (52%), Positives = 45/72 (62%)
Frame = +3 / -2
Query: 750 SVTISCPAGTFRRTSSCSFFIRCGFRMSSVMANSNVMYEVSVPASNMSIKIALIWSLVRP 929
S+TISCP GT TSSCSF + G MSS M NS + +VSVP N S++ A + SLVR
Sbjct: 644 SLTISCPRGTILLTSSCSFPMNSGLLMSSAMVNSRTLDDVSVPPINTSVRRAFMCSLVRS 465
Query: 930 YSF*RDSNTYMK 965
YS * DS K
Sbjct: 464 YSC*TDSRISTK 429
Score = 63.8 bits (133), Expect(3) = 3e-021
Identities = 31/82 (37%), Positives = 45/82 (54%)
Frame = +2 / -1
Query: 719 LEVGHAGEVVLGDHLLPRRHVPPHFFLQLLHQVWLPYELRHGELQRHVRGVGSGLEHVYQ 898
L H V + L + PHF L L H++W P+EL HGE + V S +++ +
Sbjct: 675 LRYTHVVHVSFAHNFLSPGYNTPHFVL*LPHELWPPHELSHGEFEDVR*CVSSTNKYIRE 496
Query: 899 DSLDMVSGEAILLLKRQQYVYE 964
+S ++S E ILLL RQQ +YE
Sbjct: 495 ESFHVLSCEIILLLNRQQNIYE 430
Score = 60.6 bits (126), Expect(3) = 5e-028
Identities = 34/87 (39%), Positives = 49/87 (56%)
Frame = +2 / -1
Query: 1013 VVDELVEEVVPALPDSPGLGARHLPDELDPAQPREVVLDVEPSEEARVDVGELPEQPVAA 1192
+VD LV+ + P++P S GLG P Q +V+L VE +E+ R + E PEQ ++
Sbjct: 381 MVDYLVQ*IGPSVPHSFGLGTNRPFKHSYPTQ*WKVLLQVEAAEKPRGVLDEFPEQLASS 202
Query: 1193 FLHGELAGDGAADEVVDEGVQELAHVD 1273
L ELA A + E V++LAHVD
Sbjct: 201 ILQEELA*YDTARHAI*ECVEQLAHVD 121
Score = 52.8 bits (109), Expect(3) = 3e-021
Identities = 28/67 (41%), Positives = 35/67 (52%)
Frame = +3 / -2
Query: 1068 LAHATFLTSSIRPSLGK*SWMWNPPRRPALMSVSSRNSLLRPSSMENLPETARQTRLLTK 1247
LA L++ P+ GK S PPR S+SSRN+LLRP +NLP+T R
Sbjct: 326 LAQTALLSTPTLPNDGKYSSKLKPPRSREESSMSSRNNLLRPFCRKNLPDTIRHAMPFEN 147
Query: 1248 ECRSSLM 1268
SSLM
Sbjct: 146 ALSSSLM 126
Score = 24.0 bits (46), Expect(3) = 3e-021
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +2 / -1
Query: 1013 VVDELVEEVVPALPDSPGLG 1072
+VD LV+ + P++P S GLG
Sbjct: 381 MVDYLVQ*IGPSVPHSFGLG 322
Score = 23.5 bits (45), Expect(3) = 5e-028
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +3 / -2
Query: 1350 DRTLLALSRCTVTS 1391
DRT LS C VTS
Sbjct: 44 DRTFFTLSMCVVTS 3
>gb|BF261803.3|BF261803 HV_CEa0002E08f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0002E08f, mRNA sequence
Length = 850
Score = 239 bits (517), Expect(3) = 2e-066
Identities = 98/195 (50%), Positives = 134/195 (68%)
Frame = -2 / +1
Query: 1549 VVVSSPRVAEAVLRTYDHVFSSRPRSLVSDIIMYGATDSCFAPYGDHFRKARKLVTVHLL 1370
+VVSSPR AEAVLRT DHVF+SRP + V D ++ G D F PYG+ +R+AR+LVT HLL
Sbjct: 13 LVVSSPRAAEAVLRTQDHVFASRPTNAVVDALLDGGADIAFVPYGEFWRQARRLVTTHLL 192
Query: 1369 NASKVRSQRPAREEEVXXXXXXXXXXXXXREPVDMSELLHSFVNNLVCRAVSGKFSMEEG 1190
+A KV S R REEE VDM+ LL +F N++VCRAVSGKF EEG
Sbjct: 193 SARKVHSLRRGREEEARLVMAKIQGAAAAGATVDMTRLLGAFTNDIVCRAVSGKFFREEG 372
Query: 1189 RNRLFRELTDINAGLLGGFHIQDYFPRLGRIELVRKVACAKTRRVRKRWDDLLDKLIDDH 1010
RN LFRE+ D N GGF++ DY+P L ++ ++R++ AKT R++++WDDLLDK+I DH
Sbjct: 373 RNELFREVIDGNVAAFGGFNLLDYYPGLAKVSMLRRLVFAKTNRLKRKWDDLLDKIIVDH 552
Query: 1009 AARMATHQDEDDDKD 965
++ A+ +++ D+D
Sbjct: 553 VSQKASPREQHRDRD 597
Score = 85.4 bits (180), Expect(3) = 3e-038
Identities = 42/94 (44%), Positives = 52/94 (55%)
Frame = +2 / -2
Query: 995 CHPGRMVVDELVEEVVPALPDSPGLGARHLPDELDPAQPREVVLDVEPSEEARVDVGELP 1174
C M+ D+L+E+VVP GLG P+ Q R VV VEP++ V V +LP
Sbjct: 567 CFLADMIDDDLIEQVVPFPLQPVGLGKHQSPEHAHLGQARVVVQQVEPAKRGHVPVDDLP 388
Query: 1175 EQPVAAFLHGELAGDGAADEVVDEGVQELAHVDG 1276
EQ V AFL EL G GAA VV EG ++ HV G
Sbjct: 387 EQLVPAFLPEELPGHGAAHYVVGEGAEQPRHVHG 286
Score = 78.5 bits (165), Expect(3) = 3e-038
Identities = 39/64 (60%), Positives = 41/64 (64%)
Frame = +3 / -3
Query: 1356 TLLALSRCTVTSFRALRKWSP*GAKHESVAPYMMMSDTRERGREEKTWS*VRSTASATRG 1535
T LALSRC VTS A R+ SP*G K S P S T GRE KTWS VR TASA RG
Sbjct: 206 TFLALSRCVVTSLLACRQNSP*GTKAMSAPPSRRASTTAFVGREAKTWSCVRRTASAARG 27
Query: 1536 DETT 1547
+ETT
Sbjct: 26 EETT 15
Score = 34.5 bits (69), Expect(3) = 3e-038
Identities = 16/29 (55%), Positives = 18/29 (62%)
Frame = +3 / -1
Query: 822 FRMSSVMANSNVMYEVSVPASNMSIKIAL 908
F MSS MA+S MY+VSVP I AL
Sbjct: 769 FGMSSAMAHSRTMYKVSVPPKTSPINRAL 683
Score = 29.9 bits (59), Expect(3) = 2e-066
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -1 / +2
Query: 911 YQGYLDRHVRGRNRHLVHDVGVRHDGAHTE 822
++G +D GR+R+ +H VRH AH E
Sbjct: 680 FKGPIDGTCFGRHRNFIHSS*VRHG*AHAE 769
Score = 23.5 bits (45), Expect(3) = 2e-066
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -2 / +2
Query: 949 LSLQKEYGLTRDHIK 905
L LQ+EY LT +H K
Sbjct: 641 LGLQEEYILTTEHFK 685
>gb|AV936356.1|AV936356 AV936356 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal11a15 3', mRNA sequence
Length = 683
Score = 252 bits (545), Expect = 5e-066
Identities = 104/198 (52%), Positives = 140/198 (70%)
Frame = -2 / -2
Query: 871 DTSYMTLEFAMTELIRKPHLMKKLQEEVRRNVPAGQEMVTEDNLPGMTDLKAVIKETLRX 692
DTS LEF + EL+R+PH+M+KLQ+EVR +P GQE+++E ++ MT L+AVIKE+LR
Sbjct: 679 DTSANVLEFTLAELMRRPHMMEKLQDEVRGILPQGQEIISETDMNNMTYLRAVIKESLRL 500
Query: 691 XXXXXXXXXHYSLDACEVAGYTIPANTRVVVNAWALGRHSGYWERENEFVPERFLSGDVA 512
H ++ C + GY +PA TRVVVNAWA+GR WE EF+PERF
Sbjct: 499 HPVAPLLAPHLAMADCIIDGYIVPAGTRVVVNAWAIGRDPSSWEYPEEFIPERFTDEGST 320
Query: 511 GGVDLKPNEFQFLAFGSGRRMCPGVHSASATIEAMLSNLMYRFDWQLPAGMKAEDVDMTE 332
++ K N+FQFL FG+GRRMCPG++ A +E ML+NL+ FDW+LP G+ +D+DMTE
Sbjct: 319 MHINFKGNDFQFLPFGAGRRMCPGMNLGIANVELMLANLVCHFDWELPLGVGRKDIDMTE 140
Query: 331 VFGITVSRKEKLLLVPQA 278
VFG+TV RKEKLLLVP++
Sbjct: 139 VFGLTVRRKEKLLLVPKS 86
Score = 80.3 bits (169), Expect(2) = 5e-032
Identities = 34/74 (45%), Positives = 48/74 (64%)
Frame = +2 / +2
Query: 284 WD*EQLLLPRDRDPKHLGHVHVLRLHPRRQLPVEPVHEVGQHRLDGRGRRVDPRAHPPPG 463
W+ + LLP D PKHL H++V +P+ + PV+ H+V QH+LD R V RAHPP
Sbjct: 92 WNQQ*FLLPTDG*PKHLCHINVFSPNPKGKFPVKMAHKVCQHKLDIRDSEVHTRAHPPSC 271
Query: 464 PERQELELVGLEVD 505
+ QEL+++ LEVD
Sbjct: 272 SKWQELKIIPLEVD 313
Score = 79.0 bits (166), Expect(2) = 5e-032
Identities = 41/98 (41%), Positives = 49/98 (50%)
Frame = +3 / +3
Query: 582 PSAQALTTTRVLAGMV*PATSQAXXXXXXXXXXXXXXXXXXXLMTALRSVMPGRLSSVTI 761
P A ALTTTRV AG + P+ Q+ MTALR V+ S+ I
Sbjct: 390 PMAHALTTTRVPAGTMYPSMMQSAMARCGARRGATGCSRSDSFMTALRYVILFMSVSLII 569
Query: 762 SCPAGTFRRTSSCSFFIRCGFRMSSVMANSNVMYEVSV 875
SCP G TSSCSF I CG MSS NS + +VS+
Sbjct: 570 SCPWGKIPLTSSCSFSIMCGLLMSSAKVNSRTLADVSI 683
>gb|AV932347.1|AV932347 AV932347 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal3e02 5', mRNA sequence
Length = 606
Score = 251 bits (542), Expect = 1e-065
Identities = 104/190 (54%), Positives = 138/190 (72%)
Frame = -2 / +1
Query: 1642 LMGDIPYVSLAALATRYGPDLMLLRLGAVPTVVVSSPRVAEAVLRTYDHVFSSRPRSLVS 1463
L+G +P+VSL LA ++GPD+MLLRLGAVP +VVSS AEAVLRT+DHVF+SRP S+VS
Sbjct: 37 LIGSLPHVSLRNLAKKHGPDVMLLRLGAVPNLVVSSSHAAEAVLRTHDHVFASRPHSVVS 216
Query: 1462 DIIMYGATDSCFAPYGDHFRKARKLVTVHLLNASKVRSQRPAREEEVXXXXXXXXXXXXX 1283
D IMYG+ D FAPYG+++R+A+KLVT H+L+ KV S R A EE+
Sbjct: 217 DTIMYGSCDIGFAPYGEYWRQAKKLVTTHMLSVKKV*SFRSAAAEEISIVVAKINEAAAA 396
Query: 1282 REPVDMSELLHSFVNNLVCRAVSGKFSMEEGRNRLFRELTDINAGLLGGFHIQDYFPRLG 1103
VDMSELLH+F N++ CR VSGKF + +GR++LFREL + LLGGF +++YFP LG
Sbjct: 397 DGEVDMSELLHTFANDMACRIVSGKFFLRDGRSKLFRELIKDTSRLLGGFSLEEYFPALG 576
Query: 1102 RIELVRKVAC 1073
R+ +++K C
Sbjct: 577 RVGVLKKAVC 606
Score = 164 bits (352), Expect = 2e-039
Identities = 83/186 (44%), Positives = 100/186 (53%)
Frame = +3 / -2
Query: 1083 FLTSSIRPSLGK*SWMWNPPRRPALMSVSSRNSLLRPSSMENLPETARQTRLLTKECRSS 1262
FL++ P+ GK S NPP + +SSRN+LLRPS +N P+T R SS
Sbjct: 596 FLSTPTLPNAGKYSSKLNPPSSREVSLMSSRNNLLRPSRKKNFPDTMRHAMSFANVWSSS 417
Query: 1263 LMXXXXXXXXXXXXXXXXXXXXXXXXXXCDRTLLALSRCTVTSFRALRKWSP*GAKHESV 1442
LM D T L LS VTSF A R++SP GAK S
Sbjct: 416 LMSTSPSAAAASLILATTMLISSAAALRNDYTFLTLSMWVVTSFFACRQYSPYGAKPMSQ 237
Query: 1443 APYMMMSDTRERGREEKTWS*VRSTASATRGDETTTVGTAPRRSSIRSGPYLVASAARDT 1622
PYMM+S+T E GRE KTWS*VRSTASA ++TT +GTAPRR SI SGP A R+T
Sbjct: 236 EPYMMVSETTEWGREAKTWS*VRSTASAACEEDTTRLGTAPRRRSITSGPCFFARLRRET 57
Query: 1623 *GMSPI 1640
G P+
Sbjct: 56 WGREPM 39
>gb|AV930421.1|AV930421 AV930421 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd22h15 3', mRNA sequence
Length = 640
Score = 250 bits (540), Expect = 2e-065
Identities = 104/202 (51%), Positives = 139/202 (68%)
Frame = -2 / -1
Query: 898 LIDMFEAGTDTSYMTLEFAMTELIRKPHLMKKLQEEVRRNVPAGQEMVTEDNLPGMTDLK 719
L D+F DTS LEF + EL+R+PH+M+KLQ+EVR +P GQE+++E ++ MT L+
Sbjct: 640 LTDVFFGAIDTSANVLEFTLAELMRRPHMMEKLQDEVRGILPQGQEIISETDMNNMTYLR 461
Query: 718 AVIKETLRXXXXXXXXXXHYSLDACEVAGYTIPANTRVVVNAWALGRHSGYWERENEFVP 539
AVIKE+LR H ++ C + GY +PA TRVVVNAWA+GR WE EF+P
Sbjct: 460 AVIKESLRLHPVAPLLAPHLAMADCIIDGYIVPAGTRVVVNAWAIGRDPSSWEYPEEFIP 281
Query: 538 ERFLSGDVAGGVDLKPNEFQFLAFGSGRRMCPGVHSASATIEAMLSNLMYRFDWQLPAGM 359
ERF ++ K N+FQFL FG+GRRMCPG++ A +E ML+NL+ FDW+LP G+
Sbjct: 280 ERFTDEGSTMHINFKGNDFQFLPFGAGRRMCPGMNLGIANVELMLANLVCHFDWELPLGV 101
Query: 358 KAEDVDMTEVFGITVSRKEKLL 293
+D+DMTEVFG+TV RKEKLL
Sbjct: 100 GRKDIDMTEVFGLTVRRKEKLL 35
Score = 80.8 bits (170), Expect(2) = 1e-031
Identities = 42/105 (40%), Positives = 51/105 (48%)
Frame = +3 / +3
Query: 582 PSAQALTTTRVLAGMV*PATSQAXXXXXXXXXXXXXXXXXXXLMTALRSVMPGRLSSVTI 761
P A ALTTTRV AG + P+ Q+ MTALR V+ S+ I
Sbjct: 324 PMAHALTTTRVPAGTMYPSMMQSAMARCGARRGATGCSRSDSFMTALRYVILFMSVSLII 503
Query: 762 SCPAGTFRRTSSCSFFIRCGFRMSSVMANSNVMYEVSVPASNMSI 896
SCP G TSSCSF I CG MSS NS + +VS+ S+
Sbjct: 504 SCPWGKIPLTSSCSFSIMCGLLMSSAKVNSRTLADVSIAPKKTSV 638
Score = 77.6 bits (163), Expect(2) = 1e-031
Identities = 33/68 (48%), Positives = 45/68 (66%)
Frame = +2 / +2
Query: 302 LLPRDRDPKHLGHVHVLRLHPRRQLPVEPVHEVGQHRLDGRGRRVDPRAHPPPGPERQEL 481
LLP D PKHL H++V +P+ + PV+ H+V QH+LD R V RAHPP + QEL
Sbjct: 44 LLPTDG*PKHLCHINVFSPNPKGKFPVKMAHKVCQHKLDIRDSEVHTRAHPPSCSKWQEL 223
Query: 482 ELVGLEVD 505
+++ LEVD
Sbjct: 224 KIIPLEVD 247
>gb|BJ548006.1|BJ548006 BJ548006 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal15n22 3', mRNA sequence
Length = 684
Score = 250 bits (540), Expect = 2e-065
Identities = 103/198 (52%), Positives = 139/198 (70%)
Frame = -2 / -3
Query: 871 DTSYMTLEFAMTELIRKPHLMKKLQEEVRRNVPAGQEMVTEDNLPGMTDLKAVIKETLRX 692
DTS EF + EL+R+PH+M+KLQ+EVR +P GQE+++E ++ MT L+AVIKE+LR
Sbjct: 679 DTSANVXEFTLAELMRRPHMMEKLQDEVRGILPQGQEIISETDMNNMTYLRAVIKESLRL 500
Query: 691 XXXXXXXXXHYSLDACEVAGYTIPANTRVVVNAWALGRHSGYWERENEFVPERFLSGDVA 512
H ++ C + GY +PA TRVVVNAWA+GR WE EF+PERF
Sbjct: 499 HPVAPLLAPHLAMADCIIDGYIVPAGTRVVVNAWAIGRDPSSWEYPEEFIPERFTDEGST 320
Query: 511 GGVDLKPNEFQFLAFGSGRRMCPGVHSASATIEAMLSNLMYRFDWQLPAGMKAEDVDMTE 332
++ K N+FQFL FG+GRRMCPG++ A +E ML+NL+ FDW+LP G+ +D+DMTE
Sbjct: 319 MHINFKGNDFQFLPFGAGRRMCPGMNLGIANVELMLANLVCHFDWELPLGVGRKDIDMTE 140
Query: 331 VFGITVSRKEKLLLVPQA 278
VFG+TV RKEKLLLVP++
Sbjct: 139 VFGLTVRRKEKLLLVPKS 86
Score = 80.3 bits (169), Expect(2) = 7e-032
Identities = 34/74 (45%), Positives = 48/74 (64%)
Frame = +2 / +2
Query: 284 WD*EQLLLPRDRDPKHLGHVHVLRLHPRRQLPVEPVHEVGQHRLDGRGRRVDPRAHPPPG 463
W+ + LLP D PKHL H++V +P+ + PV+ H+V QH+LD R V RAHPP
Sbjct: 92 WNQQ*FLLPTDG*PKHLCHINVFSPNPKGKFPVKMAHKVCQHKLDIRDSEVHTRAHPPSC 271
Query: 464 PERQELELVGLEVD 505
+ QEL+++ LEVD
Sbjct: 272 SKWQELKIIPLEVD 313
Score = 78.5 bits (165), Expect(2) = 7e-032
Identities = 41/98 (41%), Positives = 49/98 (50%)
Frame = +3 / +3
Query: 582 PSAQALTTTRVLAGMV*PATSQAXXXXXXXXXXXXXXXXXXXLMTALRSVMPGRLSSVTI 761
P A ALTTTRV AG + P+ Q+ MTALR V+ S+ I
Sbjct: 390 PMAHALTTTRVPAGTMYPSMMQSAMARCGARRGATGCSRSDSFMTALRYVILFMSVSLII 569
Query: 762 SCPAGTFRRTSSCSFFIRCGFRMSSVMANSNVMYEVSV 875
SCP G TSSCSF I CG MSS NS + +VS+
Sbjct: 570 SCPWGKIPLTSSCSFSIMCGLLMSSAKVNSXTLADVSI 683
>gb|AV919647.1|AV919647 AV919647 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags6p16 3', mRNA sequence
Length = 703
Score = 248 bits (537), Expect = 6e-065
Identities = 103/197 (52%), Positives = 136/197 (69%)
Frame = -2 / -2
Query: 874 TDTSYMTLEFAMTELIRKPHLMKKLQEEVRRNVPAGQEMVTEDNLPGMTDLKAVIKETLR 695
TDTS + LE+AM L++ P +M LQ EVR +P G++ VT+D+L G+ LKAVIKETLR
Sbjct: 702 TDTSTIVLEYAMVRLMQNPRVMAMLQAEVRSTIPKGKDTVTQDDLHGLPYLKAVIKETLR 523
Query: 694 XXXXXXXXXXHYSLDACEVAGYTIPANTRVVVNAWALGRHSGYWERENEFVPERFLSGDV 515
H S+D C + GYTIP+ TR +N +A+ R WE EF+PERF+ G
Sbjct: 522 LHMPGPLMVPHLSMDECIINGYTIPSGTRTFINTYAIQRDPSNWESPEEFMPERFMEGGS 343
Query: 514 AGGVDLKPNEFQFLAFGSGRRMCPGVHSASATIEAMLSNLMYRFDWQLPAGMKAEDVDMT 335
A +D K N+FQ+ FGSGRR+CPG++ A+ATI+ ML+NLMY FDW+LP + E ++MT
Sbjct: 342 AAAMDYKGNDFQYFPFGSGRRICPGINFATATIQLMLTNLMYHFDWKLPPESEEEGINMT 163
Query: 334 EVFGITVSRKEKLLLVP 284
E FG+TV RKEKLLLVP
Sbjct: 162 ETFGLTVHRKEKLLLVP 112
Score = 90.4 bits (191), Expect(2) = 5e-025
Identities = 47/94 (50%), Positives = 53/94 (56%)
Frame = +3 / +2
Query: 285 GTRSSFSFLETVIPNTSVMSTSSAFIPAGSCQSNRYMRLDSIASMVADAEWTPGHILRPD 464
GT SFS TV PN SV+ S+ GS QS YMR S++ MVA A+ PGHILRPD
Sbjct: 113 GTSRSFSLRCTVSPNVSVIFMPSSSDSGGSFQSKWYMRFVSMS*MVAVAKLIPGHILRPD 292
Query: 465 PNARNWNSLGLRSTPPATSPLRNLSGTNSFSRSQ 566
PN + W S L S A P N SG NS SQ
Sbjct: 293 PNGKYWKSFPL*SMAAALPPSMNRSGMNSSGLSQ 394
Score = 49.2 bits (101), Expect(2) = 5e-025
Identities = 26/56 (46%), Positives = 33/56 (58%)
Frame = +3 / +2
Query: 708 LMTALRSVMPGRLSSVTISCPAGTFRRTSSCSFFIRCGFRMSSVMANSNVMYEVSV 875
L+TA R P R S VT+S P G TS+CS + GF +S MA S+ M +VSV
Sbjct: 536 LITAFR*GRPWRSSWVTVSFPLGMVLLTSACSMAMTRGFCISRTMAYSSTMVDVSV 703
>gb|AV921112.1|AV921112 AV921112 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags1a14 3', mRNA sequence
Length = 746
Score = 248 bits (535), Expect = 1e-064
Identities = 105/201 (52%), Positives = 136/201 (67%)
Frame = -2 / -1
Query: 886 FEAGTDTSYMTLEFAMTELIRKPHLMKKLQEEVRRNVPAGQEMVTEDNLPGMTDLKAVIK 707
F AGTDTSY+ +E+AM L++ P LM KLQ EVR ++P G+ MV ED+L + LKAVIK
Sbjct: 746 FXAGTDTSYIVMEYAMARLMQNPDLMTKLQAEVRSSIPKGKHMVIEDDLNHLAYLKAVIK 567
Query: 706 ETLRXXXXXXXXXXHYSLDACEVAGYTIPANTRVVVNAWALGRHSGYWERENEFVPERFL 527
ETLR H ++ C + GYTIP+ TRV+VN+ A+ R WE EF+PERF+
Sbjct: 566 ETLRLHMPAPLLVPHLAMADCVINGYTIPSGTRVIVNSRAIARDPSSWESAEEFLPERFM 387
Query: 526 SGDVAGGVDLKPNEFQFLAFGSGRRMCPGVHSASATIEAMLSNLMYRFDWQLPAGMKAED 347
G A +D K N F +L FG+GRR+CPG++ A A IE ML+NL+Y FDW+LP G
Sbjct: 386 QGGSAAAMDYKGNGFLYLPFGTGRRICPGINFAIAAIEIMLANLVYHFDWKLPPGSAERG 207
Query: 346 VDMTEVFGITVSRKEKLLLVP 284
+ MTE FG+TV RK+KLLLVP
Sbjct: 206 ISMTESFGLTVHRKDKLLLVP 144
Score = 79.0 bits (166), Expect(2) = 6e-030
Identities = 44/94 (46%), Positives = 50/94 (53%)
Frame = +3 / +1
Query: 285 GTRSSFSFLETVIPNTSVMSTSSAFIPAGSCQSNRYMRLDSIASMVADAEWTPGHILRPD 464
GTR S S TV PN SV+ + P GS QS Y RL S+ SM A A++ PGHILRP
Sbjct: 145 GTRRSLSLRCTVSPNDSVILIPRSADPGGSFQSKWYTRLASMISMAAMAKFIPGHILRPV 324
Query: 465 PNARNWNSLGLRSTPPATSPLRNLSGTNSFSRSQ 566
PN R L S A P SG NS + SQ
Sbjct: 325 PNGR*RKPFPL*SMAAALPPCMKRSGRNSSALSQ 426
Score = 73.5 bits (154), Expect(2) = 6e-030
Identities = 42/98 (42%), Positives = 50/98 (51%)
Frame = +3 / +1
Query: 588 AQALTTTRVLAGMV*PATSQAXXXXXXXXXXXXXXXXXXXLMTALRSVMPGRLSSVTISC 767
A+ LT TRV GMV*P +Q+ LMTA R R SS+T+
Sbjct: 448 ARLLTMTRVPDGMV*PFMTQSAMARWGTRSGAGM*SRSVSLMTAFR*ARWLRSSSMTMCF 627
Query: 768 PAGTFRRTSSCSFFIRCGFRMSSVMANSNVMYEVSVPA 881
P G TS+CS +R GF MS MA S MY+VSVPA
Sbjct: 628 PLGMLLLTSACSLVMRSGFCMSRAMAYSITMYDVSVPA 741
>gb|AV913934.1|AV913934 AV913934 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags23m23 5', mRNA sequence
Length = 660
Score = 247 bits (534), Expect = 2e-064
Identities = 103/200 (51%), Positives = 136/200 (68%)
Frame = -2 / +2
Query: 883 EAGTDTSYMTLEFAMTELIRKPHLMKKLQEEVRRNVPAGQEMVTEDNLPGMTDLKAVIKE 704
EAGT + LE+AM L++ P +M LQ EVR +P G++ VT+D+L G+ LKAVIKE
Sbjct: 8 EAGTXHIXLVLEYAMVRLMQNPRVMAMLQAEVRSTIPKGKDTVTQDDLHGLPYLKAVIKE 187
Query: 703 TLRXXXXXXXXXXHYSLDACEVAGYTIPANTRVVVNAWALGRHSGYWERENEFVPERFLS 524
TLR H S+D C + GYTIP+ TR +N +A+ R WE EF+PERF+
Sbjct: 188 TLRLHMPGPLMVPHLSMDECIINGYTIPSGTRTFINTYAIQRDPSNWESPEEFMPERFME 367
Query: 523 GDVAGGVDLKPNEFQFLAFGSGRRMCPGVHSASATIEAMLSNLMYRFDWQLPAGMKAEDV 344
G A +D K N+FQ+ FGSGRR+CPG++ A+ATI+ ML+NLMY FDW+LP + E +
Sbjct: 368 GGSAAAMDYKGNDFQYFPFGSGRRICPGINFATATIQLMLTNLMYHFDWKLPPESEEEGI 547
Query: 343 DMTEVFGITVSRKEKLLLVP 284
+MTE FG+TV RKEKLLLVP
Sbjct: 548 NMTETFGLTVHRKEKLLLVP 607
Score = 90.4 bits (191), Expect(2) = 2e-024
Identities = 47/94 (50%), Positives = 53/94 (56%)
Frame = +3 / -1
Query: 285 GTRSSFSFLETVIPNTSVMSTSSAFIPAGSCQSNRYMRLDSIASMVADAEWTPGHILRPD 464
GT SFS TV PN SV+ S+ GS QS YMR S++ MVA A+ PGHILRPD
Sbjct: 606 GTSRSFSLRCTVSPNVSVIFMPSSSDSGGSFQSKWYMRFVSMS*MVAVAKLIPGHILRPD 427
Query: 465 PNARNWNSLGLRSTPPATSPLRNLSGTNSFSRSQ 566
PN + W S L S A P N SG NS SQ
Sbjct: 426 PNGKYWKSFPL*SMAAALPPSMNRSGMNSSGLSQ 325
Score = 47.3 bits (97), Expect(2) = 2e-024
Identities = 26/59 (44%), Positives = 32/59 (54%)
Frame = +3 / -1
Query: 708 LMTALRSVMPGRLSSVTISCPAGTFRRTSSCSFFIRCGFRMSSVMANSNVMYEVSVPAS 884
L+TA R P R S VT+S P G TS+CS + GF +S MA S+ VPAS
Sbjct: 183 LITAFR*GRPWRSSWVTVSFPLGMVLLTSACSMAMTRGFCISRTMAYSSTRXMCXVPAS 7
>gb|AV934261.1|AV934261 AV934261 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal11k15 5', mRNA sequence
Length = 598
Score = 247 bits (533), Expect = 2e-064
Identities = 103/187 (55%), Positives = 137/187 (73%)
Frame = -2 / +1
Query: 1642 LMGDIPYVSLAALATRYGPDLMLLRLGAVPTVVVSSPRVAEAVLRTYDHVFSSRPRSLVS 1463
L+G +P+VSL LA ++GPD+MLLRLGAVP +VVSS AEAVLRT+DHVF+SRP S+VS
Sbjct: 37 LIGSLPHVSLRNLAKKHGPDVMLLRLGAVPNLVVSSSHAAEAVLRTHDHVFASRPHSVVS 216
Query: 1462 DIIMYGATDSCFAPYGDHFRKARKLVTVHLLNASKVRSQRPAREEEVXXXXXXXXXXXXX 1283
D IMYG+ D FAPYG+++R+A+KLVT H+L+ KV S R A EE+
Sbjct: 217 DTIMYGSCDIGFAPYGEYWRQAKKLVTTHMLSVKKV*SFRSAAAEEISIVVAKINEAAAA 396
Query: 1282 REPVDMSELLHSFVNNLVCRAVSGKFSMEEGRNRLFRELTDINAGLLGGFHIQDYFPRLG 1103
VDMSELLH+F N++ CR VSGKF + +GR++LFREL + LLGGF +++YFP LG
Sbjct: 397 DGEVDMSELLHTFANDMACRIVSGKFFLRDGRSKLFRELIKDTSRLLGGFSLEEYFPALG 576
Query: 1102 RIELVRK 1082
R+ +++K
Sbjct: 577 RVGVLKK 597
Score = 164 bits (352), Expect = 2e-039
Identities = 83/186 (44%), Positives = 100/186 (53%)
Frame = +3 / -3
Query: 1083 FLTSSIRPSLGK*SWMWNPPRRPALMSVSSRNSLLRPSSMENLPETARQTRLLTKECRSS 1262
FL++ P+ GK S NPP + +SSRN+LLRPS +N P+T R SS
Sbjct: 596 FLSTPTLPNAGKYSSKLNPPSSREVSLMSSRNNLLRPSRKKNFPDTMRHAMSFANVWSSS 417
Query: 1263 LMXXXXXXXXXXXXXXXXXXXXXXXXXXCDRTLLALSRCTVTSFRALRKWSP*GAKHESV 1442
LM D T L LS VTSF A R++SP GAK S
Sbjct: 416 LMSTSPSAAAASLILATTMLISSAAALRNDYTFLTLSMWVVTSFFACRQYSPYGAKPMSQ 237
Query: 1443 APYMMMSDTRERGREEKTWS*VRSTASATRGDETTTVGTAPRRSSIRSGPYLVASAARDT 1622
PYMM+S+T E GRE KTWS*VRSTASA ++TT +GTAPRR SI SGP A R+T
Sbjct: 236 EPYMMVSETTEWGREAKTWS*VRSTASAACEEDTTRLGTAPRRRSITSGPCFFARLRRET 57
Query: 1623 *GMSPI 1640
G P+
Sbjct: 56 WGREPM 39
>gb|AV936516.1|AV936516 AV936516 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal11k15 3', mRNA sequence
Length = 707
Score = 246 bits (531), Expect = 4e-064
Identities = 100/193 (51%), Positives = 137/193 (70%)
Frame = -2 / -2
Query: 856 TLEFAMTELIRKPHLMKKLQEEVRRNVPAGQEMVTEDNLPGMTDLKAVIKETLRXXXXXX 677
+ EF + EL+R+PH+M+KLQ+EVR +P GQE+++E ++ MT L+AVIKE+LR
Sbjct: 685 SFEFTLAELMRRPHMMEKLQDEVRGILPQGQEIISETDMNNMTYLRAVIKESLRLHPVAP 506
Query: 676 XXXXHYSLDACEVAGYTIPANTRVVVNAWALGRHSGYWERENEFVPERFLSGDVAGGVDL 497
H ++ C + GY +PA TRVVVNAWA+GR WE EF+PERF ++
Sbjct: 505 LLAPHLAMADCIIDGYIVPAGTRVVVNAWAIGRDPSSWEYPEEFIPERFTDEGSTMHINF 326
Query: 496 KPNEFQFLAFGSGRRMCPGVHSASATIEAMLSNLMYRFDWQLPAGMKAEDVDMTEVFGIT 317
K N+FQFL FG+GRRMCPG++ A +E ML+NL+ FDW+LP G+ +D+DMTEVFG+T
Sbjct: 325 KGNDFQFLPFGAGRRMCPGMNLGIANVELMLANLVCHFDWELPLGVGRKDIDMTEVFGLT 146
Query: 316 VSRKEKLLLVPQA 278
V RKEKLLLVP++
Sbjct: 145 VRRKEKLLLVPKS 107
Score = 80.3 bits (169), Expect(2) = 3e-030
Identities = 34/74 (45%), Positives = 48/74 (64%)
Frame = +2 / +2
Query: 284 WD*EQLLLPRDRDPKHLGHVHVLRLHPRRQLPVEPVHEVGQHRLDGRGRRVDPRAHPPPG 463
W+ + LLP D PKHL H++V +P+ + PV+ H+V QH+LD R V RAHPP
Sbjct: 113 WNQQ*FLLPTDG*PKHLCHINVFSPNPKGKFPVKMAHKVCQHKLDIRDSEVHTRAHPPSC 292
Query: 464 PERQELELVGLEVD 505
+ QEL+++ LEVD
Sbjct: 293 SKWQELKIIPLEVD 334
Score = 73.0 bits (153), Expect(2) = 3e-030
Identities = 39/90 (43%), Positives = 44/90 (48%)
Frame = +3 / +3
Query: 582 PSAQALTTTRVLAGMV*PATSQAXXXXXXXXXXXXXXXXXXXLMTALRSVMPGRLSSVTI 761
P A ALTTTRV AG + P+ Q+ MTALR V+ S+ I
Sbjct: 411 PMAHALTTTRVPAGTMYPSMMQSAMARCGARRGATGCSRSDSFMTALRYVILFMSVSLII 590
Query: 762 SCPAGTFRRTSSCSFFIRCGFRMSSVMANS 851
SCP G TSSCSF I CG MSS NS
Sbjct: 591 SCPWGKIPLTSSCSFSIMCGLLMSSAKVNS 680
>gb|BE420993.1|BE420993 HWM004.F10 ITEC HWM Barley Leaf Library Hordeum vulgare subsp.
vulgare cDNA clone HWM004.F10, mRNA sequence
Length = 1299
Score = 241 bits (520), Expect = 1e-062
Identities = 97/200 (48%), Positives = 137/200 (68%)
Frame = -2 / +2
Query: 1570 RLGAVPTVVVSSPRVAEAVLRTYDHVFSSRPRSLVSDIIMYGATDSCFAPYGDHFRKARK 1391
R A+ T+VVSSP +AVLRT+DHVF+SRP SLVS+I+ YG +D F+PYG+H+R+ RK
Sbjct: 86 RNSALATLVVSSPSAGQAVLRTHDHVFASRPYSLVSEILFYGPSDVAFSPYGEHWRQVRK 265
Query: 1390 LVTVHLLNASKVRSQRPAREEEVXXXXXXXXXXXXXREPVDMSELLHSFVNNLVCRAVSG 1211
+ T HLL KVRS R ARE +V +DMSELL++F N++VC AVSG
Sbjct: 266 IATTHLLTNKKVRSYRHAREHDVRLVVAKIRDVASKCTAIDMSELLNAFTNDIVCHAVSG 445
Query: 1210 KFSMEEGRNRLFRELTDINAGLLGGFHIQDYFPRLGRIELVRKVACAKTRRVRKRWDDLL 1031
K E G N+L REL + N+ LLGGF++ DYFPRL +++++ ++ CAK +V K WD+LL
Sbjct: 446 KLFTERGHNKLCRELVEANSLLLGGFNLVDYFPRLVQMDIIMRMGCAKAXKVNKMWDNLL 625
Query: 1030 DKLIDDHAARMATHQDEDDD 971
+ +ID+HA + + +D+
Sbjct: 626 NSIIDEHARKSVPEHNNEDN 685
Score = 74.8 bits (157), Expect(2) = 2e-027
Identities = 36/71 (50%), Positives = 44/71 (61%)
Frame = +3 / -1
Query: 1350 DRTLLALSRCTVTSFRALRKWSP*GAKHESVAPYMMMSDTRERGREEKTWS*VRSTASAT 1529
+RT L + RC V F R+ SP*G K S P +S TRE GR+ KTWS VRSTA
Sbjct: 306 ERTFLLVRRCVVAIFLTCRQCSP*GLKATSEGP*KRISLTRE*GRDAKTWSCVRSTACPA 127
Query: 1530 RGDETTTVGTA 1562
GD+TT+V +A
Sbjct: 126 LGDDTTSVASA 94
Score = 69.3 bits (145), Expect(2) = 2e-027
Identities = 35/89 (39%), Positives = 49/89 (55%)
Frame = +2 / -3
Query: 1010 MVVDELVEEVVPALPDSPGLGARHLPDELDPAQPREVVLDVEPSEEARVDVGELPEQPVA 1189
M VD+ +E+V+P L GL A H D++ QP EVV VE E V + EL + V
Sbjct: 646 MFVDDTIEQVIPHLIHFXGLSATHPHDDVHLHQPGEVVHQVESP*EQ*VGLDELSTEFVM 467
Query: 1190 AFLHGELAGDGAADEVVDEGVQELAHVDG 1276
+ +LAG V+ EG+++L HVDG
Sbjct: 466 SPFRKKLAGHSMTHNVISEGIEKLTHVDG 380
>gb|AV936349.1|AV936349 AV936349 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal11a04 3', mRNA sequence
Length = 668
Score = 239 bits (517), Expect = 3e-062
Identities = 98/186 (52%), Positives = 133/186 (71%)
Frame = -2 / -1
Query: 835 ELIRKPHLMKKLQEEVRRNVPAGQEMVTEDNLPGMTDLKAVIKETLRXXXXXXXXXXHYS 656
EL+R+PH+M+KLQ+EVR +P GQE+++E ++ MT L+AVIKE+LR H +
Sbjct: 665 ELMRRPHMMEKLQDEVRGILPQGQEIISETDMNNMTYLRAVIKESLRLHPVAPLLAPHLA 486
Query: 655 LDACEVAGYTIPANTRVVVNAWALGRHSGYWERENEFVPERFLSGDVAGGVDLKPNEFQF 476
+ C + GY +PA TRVVVNAWA+GR WE EF+PERF ++ K N+FQF
Sbjct: 485 MADCIIDGYIVPAGTRVVVNAWAIGRDPSSWEYPEEFIPERFTDEGSTMHINFKGNDFQF 306
Query: 475 LAFGSGRRMCPGVHSASATIEAMLSNLMYRFDWQLPAGMKAEDVDMTEVFGITVSRKEKL 296
L FG+GRRMCPG++ A +E ML+NL+ FDW+LP G+ +D+DMTEVFG+TV RKEKL
Sbjct: 305 LPFGAGRRMCPGMNLGIANVELMLANLVCHFDWELPLGVGRKDIDMTEVFGLTVRRKEKL 126
Query: 295 LLVPQA 278
LLVP++
Sbjct: 125 LLVPKS 108
Score = 80.3 bits (169), Expect(2) = 5e-029
Identities = 34/74 (45%), Positives = 48/74 (64%)
Frame = +2 / +3
Query: 284 WD*EQLLLPRDRDPKHLGHVHVLRLHPRRQLPVEPVHEVGQHRLDGRGRRVDPRAHPPPG 463
W+ + LLP D PKHL H++V +P+ + PV+ H+V QH+LD R V RAHPP
Sbjct: 114 WNQQ*FLLPTDG*PKHLCHINVFSPNPKGKFPVKMAHKVCQHKLDIRDSEVHTRAHPPSC 293
Query: 464 PERQELELVGLEVD 505
+ QEL+++ LEVD
Sbjct: 294 SKWQELKIIPLEVD 335
Score = 68.9 bits (144), Expect(2) = 5e-029
Identities = 37/85 (43%), Positives = 42/85 (49%)
Frame = +3 / +1
Query: 582 PSAQALTTTRVLAGMV*PATSQAXXXXXXXXXXXXXXXXXXXLMTALRSVMPGRLSSVTI 761
P A ALTTTRV AG + P+ Q+ MTALR V+ S+ I
Sbjct: 412 PMAHALTTTRVPAGTMYPSMMQSAMARCGARRGATGCSRSDSFMTALRYVILFMSVSLII 591
Query: 762 SCPAGTFRRTSSCSFFIRCGFRMSS 836
SCP G TSSCSF I CG MSS
Sbjct: 592 SCPWGKIPLTSSCSFSIMCGLLMSS 666
>gb|BJ548998.1|BJ548998 BJ548998 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal16j19 3', mRNA sequence
Length = 669
Score = 239 bits (517), Expect = 3e-062
Identities = 98/186 (52%), Positives = 133/186 (71%)
Frame = -2 / -2
Query: 835 ELIRKPHLMKKLQEEVRRNVPAGQEMVTEDNLPGMTDLKAVIKETLRXXXXXXXXXXHYS 656
EL+R+PH+M+KLQ+EVR +P GQE+++E ++ MT L+AVIKE+LR H +
Sbjct: 665 ELMRRPHMMEKLQDEVRGILPQGQEIISETDMNNMTYLRAVIKESLRLHPVAPLLAPHLA 486
Query: 655 LDACEVAGYTIPANTRVVVNAWALGRHSGYWERENEFVPERFLSGDVAGGVDLKPNEFQF 476
+ C + GY +PA TRVVVNAWA+GR WE EF+PERF ++ K N+FQF
Sbjct: 485 MADCIIDGYIVPAGTRVVVNAWAIGRDPSSWEYPEEFIPERFTDEGSTMHINFKGNDFQF 306
Query: 475 LAFGSGRRMCPGVHSASATIEAMLSNLMYRFDWQLPAGMKAEDVDMTEVFGITVSRKEKL 296
L FG+GRRMCPG++ A +E ML+NL+ FDW+LP G+ +D+DMTEVFG+TV RKEKL
Sbjct: 305 LPFGAGRRMCPGMNLGIANVELMLANLVCHFDWELPLGVGRKDIDMTEVFGLTVRRKEKL 126
Query: 295 LLVPQA 278
LLVP++
Sbjct: 125 LLVPKS 108
Score = 80.3 bits (169), Expect(2) = 5e-029
Identities = 34/74 (45%), Positives = 48/74 (64%)
Frame = +2 / +3
Query: 284 WD*EQLLLPRDRDPKHLGHVHVLRLHPRRQLPVEPVHEVGQHRLDGRGRRVDPRAHPPPG 463
W+ + LLP D PKHL H++V +P+ + PV+ H+V QH+LD R V RAHPP
Sbjct: 114 WNQQ*FLLPTDG*PKHLCHINVFSPNPKGKFPVKMAHKVCQHKLDIRDSEVHTRAHPPSC 293
Query: 464 PERQELELVGLEVD 505
+ QEL+++ LEVD
Sbjct: 294 SKWQELKIIPLEVD 335
Score = 68.9 bits (144), Expect(2) = 5e-029
Identities = 37/85 (43%), Positives = 42/85 (49%)
Frame = +3 / +1
Query: 582 PSAQALTTTRVLAGMV*PATSQAXXXXXXXXXXXXXXXXXXXLMTALRSVMPGRLSSVTI 761
P A ALTTTRV AG + P+ Q+ MTALR V+ S+ I
Sbjct: 412 PMAHALTTTRVPAGTMYPSMMQSAMARCGARRGATGCSRSDSFMTALRYVILFMSVSLII 591
Query: 762 SCPAGTFRRTSSCSFFIRCGFRMSS 836
SCP G TSSCSF I CG MSS
Sbjct: 592 SCPWGKIPLTSSCSFSIMCGLLMSS 666
>gb|BJ548386.1|BJ548386 BJ548386 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal24a03 3', mRNA sequence
Length = 645
Score = 238 bits (515), Expect = 6e-062
Identities = 98/186 (52%), Positives = 132/186 (70%)
Frame = -2 / -2
Query: 835 ELIRKPHLMKKLQEEVRRNVPAGQEMVTEDNLPGMTDLKAVIKETLRXXXXXXXXXXHYS 656
EL+R+PH+M KLQ+EVR +P GQE+++E ++ MT L+AVIKE+LR H +
Sbjct: 644 ELMRRPHMMXKLQDEVRGILPQGQEIISETDMNNMTYLRAVIKESLRLHPVAPLLAPHLA 465
Query: 655 LDACEVAGYTIPANTRVVVNAWALGRHSGYWERENEFVPERFLSGDVAGGVDLKPNEFQF 476
+ C + GY +PA TRVVVNAWA+GR WE EF+PERF ++ K N+FQF
Sbjct: 464 MADCIIDGYIVPAGTRVVVNAWAIGRDPSSWEYPEEFIPERFTDEGSTMHINFKGNDFQF 285
Query: 475 LAFGSGRRMCPGVHSASATIEAMLSNLMYRFDWQLPAGMKAEDVDMTEVFGITVSRKEKL 296
L FG+GRRMCPG++ A +E ML+NL+ FDW+LP G+ +D+DMTEVFG+TV RKEKL
Sbjct: 284 LPFGAGRRMCPGMNLGIANVELMLANLVCHFDWELPLGVGRKDIDMTEVFGLTVRRKEKL 105
Query: 295 LLVPQA 278
LLVP++
Sbjct: 104 LLVPKS 87
Score = 80.3 bits (169), Expect(2) = 4e-029
Identities = 34/74 (45%), Positives = 48/74 (64%)
Frame = +2 / +3
Query: 284 WD*EQLLLPRDRDPKHLGHVHVLRLHPRRQLPVEPVHEVGQHRLDGRGRRVDPRAHPPPG 463
W+ + LLP D PKHL H++V +P+ + PV+ H+V QH+LD R V RAHPP
Sbjct: 93 WNQQ*FLLPTDG*PKHLCHINVFSPNPKGKFPVKMAHKVCQHKLDIRDSEVHTRAHPPSC 272
Query: 464 PERQELELVGLEVD 505
+ QEL+++ LEVD
Sbjct: 273 SKWQELKIIPLEVD 314
Score = 69.3 bits (145), Expect(2) = 4e-029
Identities = 37/85 (43%), Positives = 42/85 (49%)
Frame = +3 / +1
Query: 582 PSAQALTTTRVLAGMV*PATSQAXXXXXXXXXXXXXXXXXXXLMTALRSVMPGRLSSVTI 761
P A ALTTTRV AG + P+ Q+ MTALR V+ S+ I
Sbjct: 391 PMAHALTTTRVPAGTMYPSMMQSAMARCGARRGATGCSRSDSFMTALRYVILFMSVSLII 570
Query: 762 SCPAGTFRRTSSCSFFIRCGFRMSS 836
SCP G TSSCSF I CG MSS
Sbjct: 571 SCPWGKIPLTSSCSFXIMCGLLMSS 645
>gb|BJ547960.1|BJ547960 BJ547960 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal12i23 3', mRNA sequence
Length = 669
Score = 237 bits (512), Expect = 2e-061
Identities = 97/185 (52%), Positives = 132/185 (71%)
Frame = -2 / -3
Query: 832 LIRKPHLMKKLQEEVRRNVPAGQEMVTEDNLPGMTDLKAVIKETLRXXXXXXXXXXHYSL 653
L+R+PH+M+KLQ+EVR +P GQE+++E ++ MT L+AVIKE+LR H ++
Sbjct: 667 LMRRPHMMEKLQDEVRGILPQGQEIISETDMNNMTYLRAVIKESLRLHPVAPLLAPHLAM 488
Query: 652 DACEVAGYTIPANTRVVVNAWALGRHSGYWERENEFVPERFLSGDVAGGVDLKPNEFQFL 473
C + GY +PA TRVVVNAWA+GR WE EF+PERF ++ K N+FQFL
Sbjct: 487 ADCIIDGYIVPAGTRVVVNAWAIGRDPSSWEYPEEFIPERFTDEGSTMHINFKGNDFQFL 308
Query: 472 AFGSGRRMCPGVHSASATIEAMLSNLMYRFDWQLPAGMKAEDVDMTEVFGITVSRKEKLL 293
FG+GRRMCPG++ A +E ML+NL+ FDW+LP G+ +D+DMTEVFG+TV RKEKLL
Sbjct: 307 PFGAGRRMCPGMNLGIANVELMLANLVCHFDWELPLGVGRKDIDMTEVFGLTVRRKEKLL 128
Query: 292 LVPQA 278
LVP++
Sbjct: 127 LVPKS 113
Score = 80.3 bits (169), Expect(2) = 2e-028
Identities = 34/74 (45%), Positives = 48/74 (64%)
Frame = +2 / +2
Query: 284 WD*EQLLLPRDRDPKHLGHVHVLRLHPRRQLPVEPVHEVGQHRLDGRGRRVDPRAHPPPG 463
W+ + LLP D PKHL H++V +P+ + PV+ H+V QH+LD R V RAHPP
Sbjct: 119 WNQQ*FLLPTDG*PKHLCHINVFSPNPKGKFPVKMAHKVCQHKLDIRDSEVHTRAHPPSC 298
Query: 464 PERQELELVGLEVD 505
+ QEL+++ LEVD
Sbjct: 299 SKWQELKIIPLEVD 340
Score = 67.0 bits (140), Expect(2) = 2e-028
Identities = 36/84 (42%), Positives = 41/84 (48%)
Frame = +3 / +3
Query: 582 PSAQALTTTRVLAGMV*PATSQAXXXXXXXXXXXXXXXXXXXLMTALRSVMPGRLSSVTI 761
P A ALTTTRV AG + P+ Q+ MTALR V+ S+ I
Sbjct: 417 PMAHALTTTRVPAGTMYPSMMQSAMARCGARRGATGCSRSDSFMTALRYVILFMSVSLII 596
Query: 762 SCPAGTFRRTSSCSFFIRCGFRMS 833
SCP G TSSCSF I CG MS
Sbjct: 597 SCPWGKIPLTSSCSFSIMCGLLMS 668
>gb|BJ548975.1|BJ548975 BJ548975 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal40l11 3', mRNA sequence
Length = 696
Score = 221 bits (478), Expect(2) = 2e-061
Identities = 92/177 (51%), Positives = 124/177 (70%)
Frame = -2 / -1
Query: 808 KKLQEEVRRNVPAGQEMVTEDNLPGMTDLKAVIKETLRXXXXXXXXXXHYSLDACEVAGY 629
+KLQ+EVR +P GQE+++E ++ MT L+AVIKE+LR H ++ C + GY
Sbjct: 630 EKLQDEVRGILPQGQEIISETDMNNMTYLRAVIKESLRLHPVAPLLAPHLAMADCIIDGY 451
Query: 628 TIPANTRVVVNAWALGRHSGYWERENEFVPERFLSGDVAGGVDLKPNEFQFLAFGSGRRM 449
+PA TRVVVNAWA+GR WE EF+PERF ++ K N+FQFL FG+GRRM
Sbjct: 450 IVPAGTRVVVNAWAIGRDPSSWEYPEEFIPERFTDEGSTMHINFKGNDFQFLPFGAGRRM 271
Query: 448 CPGVHSASATIEAMLSNLMYRFDWQLPAGMKAEDVDMTEVFGITVSRKEKLLLVPQA 278
CPG++ A +E ML+NL+ FDW+LP G+ +D+DMTEVFG+TV RKEKLLLVP++
Sbjct: 270 CPGMNLGIANVELMLANLVCHFDWELPLGVGRKDIDMTEVFGLTVRRKEKLLLVPKS 100
Score = 80.3 bits (169), Expect(3) = 1e-028
Identities = 34/74 (45%), Positives = 48/74 (64%)
Frame = +2 / +1
Query: 284 WD*EQLLLPRDRDPKHLGHVHVLRLHPRRQLPVEPVHEVGQHRLDGRGRRVDPRAHPPPG 463
W+ + LLP D PKHL H++V +P+ + PV+ H+V QH+LD R V RAHPP
Sbjct: 106 WNQQ*FLLPTDG*PKHLCHINVFSPNPKGKFPVKMAHKVCQHKLDIRDSEVHTRAHPPSC 285
Query: 464 PERQELELVGLEVD 505
+ QEL+++ LEVD
Sbjct: 286 SKWQELKIIPLEVD 327
Score = 56.5 bits (117), Expect(3) = 1e-028
Identities = 31/75 (41%), Positives = 36/75 (48%)
Frame = +3 / +2
Query: 582 PSAQALTTTRVLAGMV*PATSQAXXXXXXXXXXXXXXXXXXXLMTALRSVMPGRLSSVTI 761
P A ALTTTRV AG + P+ Q+ MTALR V+ S+ I
Sbjct: 404 PMAHALTTTRVPAGTMYPSMMQSAMARCGARRGATGCSRSDSFMTALRYVILFMSVSLII 583
Query: 762 SCPAGTFRRTSSCSF 806
SCP G TSSCSF
Sbjct: 584 SCPWGKIPLTSSCSF 628
Score = 35.9 bits (72), Expect(2) = 2e-061
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = -2 / -2
Query: 871 DTSYMTLEFAMTELIRKPHLMK 806
DTS LEF + EL+R+PH+MK
Sbjct: 692 DTSANVLEFTLAELMRRPHMMK 627
Score = 29.0 bits (57), Expect(3) = 1e-028
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +3 / +1
Query: 807 FIRCGFRMSSVMANSNVMYEVSV 875
FI CG MSS NS + +VS+
Sbjct: 628 FIMCGLLMSSAKVNSRTLADVSI 696
>gb|AV918301.1|AV918301 AV918301 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags20j07 3', mRNA sequence
Length = 660
Score = 236 bits (509), Expect = 4e-061
Identities = 97/188 (51%), Positives = 129/188 (68%)
Frame = -2 / -3
Query: 847 FAMTELIRKPHLMKKLQEEVRRNVPAGQEMVTEDNLPGMTDLKAVIKETLRXXXXXXXXX 668
+AM L++ P +M LQ EVR +P G++ VT+D+L G+ LKAVIKETLR
Sbjct: 658 YAMVRLMQNPRVMAMLQAEVRSTIPKGKDTVTQDDLHGLPYLKAVIKETLRLHMPGPLMV 479
Query: 667 XHYSLDACEVAGYTIPANTRVVVNAWALGRHSGYWERENEFVPERFLSGDVAGGVDLKPN 488
H S+D C + GYTIP+ TR +N +A+ R WE EF+PERF+ G A +D K N
Sbjct: 478 PHLSMDECIINGYTIPSGTRTFINTYAIQRDPSNWESPEEFMPERFMEGGSAAAMDYKGN 299
Query: 487 EFQFLAFGSGRRMCPGVHSASATIEAMLSNLMYRFDWQLPAGMKAEDVDMTEVFGITVSR 308
+FQ+ FGSGRR+CPG++ A+ATI+ ML+NLMY FDW+LP + E ++MTE FG+TV R
Sbjct: 298 DFQYFPFGSGRRICPGINFATATIQLMLTNLMYHFDWKLPPESEEEGINMTETFGLTVHR 119
Query: 307 KEKLLLVP 284
KEKLLLVP
Sbjct: 118 KEKLLLVP 95
>gb|AV915851.1|AV915851 AV915851 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags16e06 5', mRNA sequence
Length = 698
Score = 165 bits (355), Expect(2) = 2e-060
Identities = 67/156 (42%), Positives = 96/156 (61%)
Frame = -2 / +1
Query: 1438 DSCFAPYGDHFRKARKLVTVHLLNASKVRSQRPAREEEVXXXXXXXXXXXXXREPVDMSE 1259
D F PYGDH+R+ +K+ HLL A+KVRS R AREEE +D+ E
Sbjct: 4 DIAFCPYGDHWRQVKKIAMTHLLTANKVRSYRQAREEEACLVVAKLRDAMAAGAALDLGE 183
Query: 1258 LLHSFVNNLVCRAVSGKFSMEEGRNRLFRELTDINAGLLGGFHIQDYFPRLGRIELVRKV 1079
LL +F N+V AV GK ++G +LFREL + N+ L+GGF++ DYFP L +++++R +
Sbjct: 184 LLSAFSTNIVGHAVCGKSFRQKGHEKLFRELVETNSLLIGGFNVGDYFPELLKLDIIRWM 363
Query: 1078 ACAKTRRVRKRWDDLLDKLIDDHAARMATHQDEDDD 971
C + RRV K WDDLL+ LI +H ++ A +D D
Sbjct: 364 VCGRARRVNKMWDDLLESLIHEHESKPAPALGDDTD 471
Score = 89.0 bits (188), Expect(2) = 2e-060
Identities = 36/60 (60%), Positives = 47/60 (78%)
Frame = -2 / +1
Query: 976 DDKDFIYVLLSLQKEYGLTRDHIKAILIDMFEAGTDTSYMTLEFAMTELIRKPHLMKKLQ 797
DD D+I+ LLS+QKEY LTR+ +KA L+ MF AGTDTSY+ +E+AM L++ P LM KLQ
Sbjct: 460 DDTDYIHDLLSIQKEYNLTREQVKAQLVIMFGAGTDTSYIVMEYAMARLMQNPDLMTKLQ 639
Score = 84.5 bits (178), Expect(4) = 4e-035
Identities = 43/93 (46%), Positives = 55/93 (59%)
Frame = +2 / -3
Query: 1010 MVVDELVEEVVPALPDSPGLGARHLPDELDPAQPREVVLDVEPSEEARVDVGELPEQPVA 1189
M +DE E+VVP L SPG A H PD++ Q REVV VE + E V + +LPE+ +
Sbjct: 432 MFMDEAFEQVVPHLVHSPGPAANHPPDDVQLQQLREVVPHVEAANEQGVGLHQLPEELLV 253
Query: 1190 AFLHGELAGDGAADEVVDEGVQELAHVDGLPRG 1288
AFL LA G A +V EG ++LA V G P G
Sbjct: 252 AFLPEGLAAHGVAHDVGGEGTEQLAQV*GGPCG 154
Score = 62.9 bits (131), Expect(4) = 4e-035
Identities = 31/56 (55%), Positives = 37/56 (66%)
Frame = +3 / -1
Query: 795 SCSFFIRCGFRMSSVMANSNVMYEVSVPASNMSIKIALIWSLVRPYSF*RDSNTYM 962
+CS +R GF MS MA S MY+VSVPA NM AL SLVR YSF* +S ++M
Sbjct: 641 ACSLVMRSGFCMSRAMAYSITMYDVSVPAPNMITN*ALTCSLVRLYSF*IESKSWM 474
Score = 35.4 bits (71), Expect(4) = 4e-035
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +3 / -1
Query: 1350 DRTLLALSRCTVTSFRALRKWSP*GAK 1430
+RTLLA+ RC + F +WSP*G K
Sbjct: 92 ERTLLAVRRCVMAIFFTCLQWSP*GQK 12
Score = 22.6 bits (43), Expect(4) = 4e-035
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = +2 / -2
Query: 740 EVVLGDHLLPRRHVPPH 790
++VL DH+ P + PH
Sbjct: 697 KIVLYDHVFPLGYATPH 647
>gb|AV915997.1|AV915997 AV915997 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags1a14 5', mRNA sequence
Length = 606
Score = 232 bits (500), Expect = 8e-060
Identities = 100/194 (51%), Positives = 131/194 (67%)
Frame = -2 / +3
Query: 976 DDKDFIYVLLSLQKEYGLTRDHIKAILIDMFEAGTDTSYMTLEFAMTELIRKPHLMKKLQ 797
DD D+I+ LLS+QKEY LTR+ +KA L+ MF AGTDTSY+ +E+AM L++ P LM KLQ
Sbjct: 21 DDTDYIHDLLSIQKEYNLTREQVKAQLVIMFGAGTDTSYIVMEYAMARLMQNPDLMTKLQ 200
Query: 796 EEVRRNVPAGQEMVTEDNLPGMTDLKAVIKETLRXXXXXXXXXXHYSLDACEVAGYTIPA 617
EVR ++P G+ MV ED+L + LKAVIKETLR H ++ C + GYTIP+
Sbjct: 201 AEVRSSIPKGKHMVIEDDLNHLAYLKAVIKETLRLHMPAPLLVPHLAMADCVINGYTIPS 380
Query: 616 NTRVVVNAWALGRHSGYWERENEFVPERFLSGDVAGGVDLKPNEFQFLAFGSGRRMCPGV 437
TRV+VN+ A+ R WE EF+PERF+ G A +D K N F +L FG+GRR+CPG+
Sbjct: 381 GTRVIVNSRAIARDPSSWESAEEFLPERFMQGGSAAAMDYKGNGFLYLPFGTGRRICPGI 560
Query: 436 HSASATIEAMLSNL 395
+ A IE ML NL
Sbjct: 561 NFXIAXIEIMLXNL 602
Score = 96.8 bits (205), Expect(2) = 6e-028
Identities = 56/125 (44%), Positives = 67/125 (53%)
Frame = +3 / -3
Query: 588 AQALTTTRVLAGMV*PATSQAXXXXXXXXXXXXXXXXXXXLMTALRSVMPGRLSSVTISC 767
A+ LT TRV GMV*P +Q+ LMTA R R SS+T+
Sbjct: 409 ARLLTMTRVPDGMV*PFMTQSAMARWGTRSGAGM*SRSVSLMTAFR*ARWLRSSSMTMCF 230
Query: 768 PAGTFRRTSSCSFFIRCGFRMSSVMANSNVMYEVSVPASNMSIKIALIWSLVRPYSF*RD 947
P G TS+CS +R GF MS MA S MY+VSVPA NM AL SLVR YSF* +
Sbjct: 229 PLGMLLLTSACSLVMRSGFCMSRAMAYSITMYDVSVPAPNMITN*ALTCSLVRLYSF*IE 50
Query: 948 SNTYM 962
S ++M
Sbjct: 49 SKSWM 35
Score = 48.7 bits (100), Expect(2) = 6e-028
Identities = 26/57 (45%), Positives = 30/57 (52%)
Frame = +3 / -3
Query: 396 RLDSIASMVADAEWTPGHILRPDPNARNWNSLGLRSTPPATSPLRNLSGTNSFSRSQ 566
RL S+ SM A ++ PGHILRP PN R L S A P SG NS + SQ
Sbjct: 601 RLXSMISMXAMXKFXPGHILRPVPNGR*RKPFPL*SMAAALPPCMKRSGRNSSALSQ 431
>gb|BU968861.1|BU968861 HB08M23r BC Hordeum vulgare subsp. vulgare cDNA clone HB08M23
5-PRIME, mRNA sequence
Length = 624
Score = 231 bits (499), Expect = 1e-059
Identities = 100/193 (51%), Positives = 132/193 (68%)
Frame = -2 / +2
Query: 976 DDKDFIYVLLSLQKEYGLTRDHIKAILIDMFEAGTDTSYMTLEFAMTELIRKPHLMKKLQ 797
DD D+I+ LLS+QKEY LTR+ +KA L+ MF AGTDTSY+ +E+AM L++ P LM KLQ
Sbjct: 44 DDTDYIHDLLSIQKEYNLTREQVKAQLVIMFGAGTDTSYIVMEYAMARLMQNPDLMTKLQ 223
Query: 796 EEVRRNVPAGQEMVTEDNLPGMTDLKAVIKETLRXXXXXXXXXXHYSLDACEVAGYTIPA 617
EVR ++P G+ MVTED+L + LKAVIKETLR H ++ C + GYTIP+
Sbjct: 224 AEVRSSIPKGKHMVTEDDLNHLAYLKAVIKETLRLHMPAPLLVPHLAMADCIINGYTIPS 403
Query: 616 NTRVVVNAWALGRHSGYWERENEFVPERFLSGDVAGGVDLKPNEFQFLAFGSGRRMCPGV 437
TRV+VN+ A+ R WE EF+PERF+ G A +D K N F +L FG+ RR+CPG+
Sbjct: 404 GTRVIVNSRAIARDPSSWESAEEFLPERFMQGGSAAAMDYKGNGFLYLPFGTXRRICPGI 583
Query: 436 HSASATIEAMLSN 398
+ A A IE ML+N
Sbjct: 584 NFAIAAIEIMLAN 622
Score = 95.5 bits (202), Expect(2) = 1e-026
Identities = 56/125 (44%), Positives = 66/125 (52%)
Frame = +3 / -1
Query: 588 AQALTTTRVLAGMV*PATSQAXXXXXXXXXXXXXXXXXXXLMTALRSVMPGRLSSVTISC 767
A+ LT TRV GMV*P Q+ L+TA R R SSVT+
Sbjct: 432 ARLLTMTRVPDGMV*PFMMQSAMARWGTRSGAGM*SRSVSLITAFR*ARWLRSSSVTMCF 253
Query: 768 PAGTFRRTSSCSFFIRCGFRMSSVMANSNVMYEVSVPASNMSIKIALIWSLVRPYSF*RD 947
P G TS+CS +R GF MS MA S MY+VSVPA NM AL SLVR YSF* +
Sbjct: 252 PLGMLLLTSACSLVMRSGFCMSRAMAYSITMYDVSVPAPNMITN*ALTCSLVRLYSF*IE 73
Query: 948 SNTYM 962
S ++M
Sbjct: 72 SKSWM 58
Score = 46.0 bits (94), Expect(2) = 1e-026
Identities = 26/57 (45%), Positives = 30/57 (52%)
Frame = +3 / -1
Query: 396 RLDSIASMVADAEWTPGHILRPDPNARNWNSLGLRSTPPATSPLRNLSGTNSFSRSQ 566
RL S+ SM A A++ PGHILR PN R L S A P SG NS + SQ
Sbjct: 624 RLASMISMAAMAKFIPGHILRXVPNGR*RKPFPL*SMAAALPPCMKRSGRNSSALSQ 454
>gb|BQ471556.1|BQ471556 HV02M13r HV Hordeum vulgare subsp. vulgare cDNA clone HV02M13
5-PRIME, mRNA sequence
Length = 652
Score = 229 bits (495), Expect = 4e-059
Identities = 94/185 (50%), Positives = 126/185 (68%)
Frame = -2 / +2
Query: 1531 RVAEAVLRTYDHVFSSRPRSLVSDIIMYGATDSCFAPYGDHFRKARKLVTVHLLNASKVR 1352
R A+AVLRT+DHVF+SRP S V+ I+ YG+ D FAPYG H+R+ +K+ T HLL A KV
Sbjct: 8 RAAQAVLRTHDHVFASRPHSPVAHILFYGSADVVFAPYGHHWRQVKKISTTHLLTARKVH 187
Query: 1351 SQRPAREEEVXXXXXXXXXXXXXREPVDMSELLHSFVNNLVCRAVSGKFSMEEGRNRLFR 1172
S R AR+ EV +DMSELL++FV ++VC AV+G E G N+ FR
Sbjct: 188 SYRHARQHEVNLVLAKVRDAMRAGVALDMSELLNAFVFDIVCHAVAGNSFRERGLNKHFR 367
Query: 1171 ELTDINAGLLGGFHIQDYFPRLGRIELVRKVACAKTRRVRKRWDDLLDKLIDDHAARMAT 992
EL + NA L+GGF+++D+FP L ++E+ RK+ CAK RRV +WDDLLD+LID+HA A
Sbjct: 368 ELVEANASLIGGFNLEDHFPALVKLEIFRKIVCAKARRVNNKWDDLLDRLIDEHATPPAL 547
Query: 991 HQDED 977
+D D
Sbjct: 548 DEDRD 562
Score = 91.3 bits (193), Expect(3) = 2e-035
Identities = 45/99 (45%), Positives = 61/99 (61%)
Frame = +2 / -1
Query: 1004 GRMVVDELVEEVVPALPDSPGLGARHLPDELDPAQPREVVLDVEPSEEARVDVGELPEQP 1183
GRM +DE +E+VVP + SPGLGA + ++ Q REVVL VE ++E V + +LPE
Sbjct: 535 GRMFIDEPIEQVVPLVVYSPGLGANNFSEDFQLHQCREVVLQVEAADERGVGLHQLPEVL 356
Query: 1184 VAAFLHGELAGDGAADEVVDEGVQELAHVDGLPRGGGAA 1300
V + L +A G A +V DEGV++LAHV G G A
Sbjct: 355 VESSLPERIACHGVAHDVEDEGVEQLAHV*GNACAHGVA 239
Score = 54.7 bits (113), Expect(3) = 2e-035
Identities = 29/57 (50%), Positives = 32/57 (56%)
Frame = +3 / -2
Query: 1356 TLLALSRCTVTSFRALRKWSP*GAKHESVAPYMMMSDTRERGREEKTWS*VRSTASA 1526
T LA+SR V F R+W P*GAK S P M T E G + TWS VRSTA A
Sbjct: 183 TFLAVSRWVVEIFLTWRQWWP*GAKTTSAEP*KRMWATGEWGLDANTWSCVRSTACA 13
Score = 42.8 bits (87), Expect(3) = 2e-035
Identities = 20/30 (66%), Positives = 22/30 (73%)
Frame = +3 / -2
Query: 876 PASNMSIKIALIWSLVRPYSF*RDSNTYMK 965
PASNM ALIWSLVR YS * +S T+MK
Sbjct: 651 PASNMISN*ALIWSLVRLYSC*TESKTWMK 562
>gb|AV918176.1|AV918176 AV918176 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags20c01 3', mRNA sequence
Length = 655
Score = 222 bits (480), Expect = 4e-057
Identities = 92/173 (53%), Positives = 120/173 (69%)
Frame = -2 / -2
Query: 802 LQEEVRRNVPAGQEMVTEDNLPGMTDLKAVIKETLRXXXXXXXXXXHYSLDACEVAGYTI 623
LQ EVR +P G++ VT+D+L G+ LKAVIKETLR H S+D C + GYTI
Sbjct: 648 LQAEVRSTIPKGKDTVTQDDLHGLPYLKAVIKETLRLHMPGPLMVPHLSMDECIINGYTI 469
Query: 622 PANTRVVVNAWALGRHSGYWERENEFVPERFLSGDVAGGVDLKPNEFQFLAFGSGRRMCP 443
P+ TR +N +A+ R WE EF+PERF+ G A +D K N+FQ+ FGSGRR+CP
Sbjct: 468 PSGTRTFINTYAIQRDPSNWESPEEFMPERFMEGGSAAAMDYKGNDFQYFPFGSGRRICP 289
Query: 442 GVHSASATIEAMLSNLMYRFDWQLPAGMKAEDVDMTEVFGITVSRKEKLLLVP 284
G++ A+ATI+ ML+NLMY FDW+LP + E ++MTE FG+TV RKEKLLLVP
Sbjct: 288 GINFATATIQLMLTNLMYHFDWKLPPESEEEGINMTETFGLTVHRKEKLLLVP 130
>gb|AV916927.1|AV916927 AV916927 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags20c01 5', mRNA sequence
Length = 533
Score = 219 bits (472), Expect = 5e-056
Identities = 91/177 (51%), Positives = 121/177 (68%)
Frame = -2 / +1
Query: 904 AILIDMFEAGTDTSYMTLEFAMTELIRKPHLMKKLQEEVRRNVPAGQEMVTEDNLPGMTD 725
A L+ MFEAGTDTS + LE+AM L++ P +M LQ EVR +P G++ VT+D+L G+
Sbjct: 1 AQLLIMFEAGTDTSTIVLEYAMVRLMQNPRVMAMLQAEVRSTIPKGKDTVTQDDLHGLPY 180
Query: 724 LKAVIKETLRXXXXXXXXXXHYSLDACEVAGYTIPANTRVVVNAWALGRHSGYWERENEF 545
LKAVIKETLR H S+D C + GYTIP+ TR +N +A+ R WE EF
Sbjct: 181 LKAVIKETLRLHMPGPLMVPHLSMDECIINGYTIPSGTRTFINTYAIQRDPSNWESPEEF 360
Query: 544 VPERFLSGDVAGGVDLKPNEFQFLAFGSGRRMCPGVHSASATIEAMLSNLMYRFDWQ 374
+PERF+ G A +D K N+FQ+ FGSGRR+CPG++ A+ATI+ ML+NLMY FDW+
Sbjct: 361 MPERFMEGGSAAAMDYKGNDFQYFPFGSGRRICPGINFATATIQLMLTNLMYHFDWK 531
Score = 68.9 bits (144), Expect(2) = 3e-022
Identities = 34/65 (52%), Positives = 38/65 (58%)
Frame = +3 / -1
Query: 372 SCQSNRYMRLDSIASMVADAEWTPGHILRPDPNARNWNSLGLRSTPPATSPLRNLSGTNS 551
S QS YMR S++ MVA A+ PGHILRPDPN + W S L S A P N SG NS
Sbjct: 533 SFQSKWYMRFVSMS*MVAVAKLIPGHILRPDPNGKYWKSFPL*SMAAALPPSMNRSGMNS 354
Query: 552 FSRSQ 566
SQ
Sbjct: 353 SGLSQ 339
Score = 61.1 bits (127), Expect(2) = 3e-022
Identities = 31/61 (50%), Positives = 38/61 (62%)
Frame = +3 / -1
Query: 708 LMTALRSVMPGRLSSVTISCPAGTFRRTSSCSFFIRCGFRMSSVMANSNVMYEVSVPASN 887
L+TA R P R S VT+S P G TS+CS + GF +S MA S+ M +VSVPASN
Sbjct: 197 LITAFR*GRPWRSSWVTVSFPLGMVLLTSACSMAMTRGFCISRTMAYSSTMVDVSVPASN 18
Query: 888 M 890
M
Sbjct: 17 M 15
>gb|AV934098.1|AV934098 AV934098 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal11a04 5', mRNA sequence
Length = 638
Score = 167 bits (359), Expect(3) = 1e-055
Identities = 69/138 (50%), Positives = 97/138 (70%)
Frame = -2 / +3
Query: 973 DKDFIYVLLSLQKEYGLTRDHIKAILIDMFEAGTDTSYMTLEFAMTELIRKPHLMKKLQE 794
D DF+ ++LS+Q+EY LTR+H+KA+L D+F DTS LEF + EL+R+PH+M+KLQ+
Sbjct: 123 DDDFVDIMLSVQQEYALTREHMKALLTDVFFGAIDTSANVLEFTLAELMRRPHMMEKLQD 302
Query: 793 EVRRNVPAGQEMVTEDNLPGMTDLKAVIKETLRXXXXXXXXXXHYSLDACEVAGYTIPAN 614
EVR +P GQE+++E ++ MT L+AVIKE+LR H ++ C + GY +PA
Sbjct: 303 EVRGILPQGQEIISETDMNNMTYLRAVIKESLRLHPVAPLLAPHLAMADCIIDGYIVPAG 482
Query: 613 TRVVVNAWALGRHSGYWE 560
TRVVVNAWA+GR WE
Sbjct: 483 TRVVVNAWAIGRDPSSWE 536
Score = 94.1 bits (199), Expect(2) = 5e-022
Identities = 49/118 (41%), Positives = 60/118 (50%)
Frame = +3 / -2
Query: 582 PSAQALTTTRVLAGMV*PATSQAXXXXXXXXXXXXXXXXXXXLMTALRSVMPGRLSSVTI 761
P A ALTTTRV AG + P+ Q+ MTALR V+ S+ I
Sbjct: 514 PMAHALTTTRVPAGTMYPSMMQSAMARCGARRGATGCSRSDSFMTALRYVILFMSVSLII 335
Query: 762 SCPAGTFRRTSSCSFFIRCGFRMSSVMANSNVMYEVSVPASNMSIKIALIWSLVRPYS 935
SCP G TSSCSF I CG MSS NS + +VS+ S++ A + SLVR YS
Sbjct: 334 SCPWGKIPLTSSCSFSIMCGLLMSSAKVNSRTLADVSIAPKKTSVRRAFMCSLVRAYS 161
Score = 52.8 bits (109), Expect(3) = 1e-055
Identities = 19/40 (47%), Positives = 26/40 (65%)
Frame = -2 / +3
Query: 1090 VRKVACAKTRRVRKRWDDLLDKLIDDHAARMATHQDEDDD 971
+ K CAK +RVR RW DLLD++ID+H ++ D DD
Sbjct: 9 LXKAVCAKAKRVRNRWADLLDQVIDNHVSKRKLASDHKDD 128
Score = 36.8 bits (74), Expect(3) = 1e-055
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = -2 / +1
Query: 550 EFVPERFLSGDVAGGVDLKPNEFQFLAFGS 461
EF+PERF ++ K N+FQFL FG+
Sbjct: 547 EFIPERFTDEGSTMHINFKGNDFQFLPFGA 636
Score = 31.8 bits (63), Expect(2) = 5e-022
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +2 / -1
Query: 1010 MVVDELVEEVVPALPDSPGLGARHL 1084
M+VD LV+++ P +P S GLG L
Sbjct: 89 MIVDHLVQQIRPPVPHSFGLGTNRL 15
>gb|BJ546501.1|BJ546501 BJ546501 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak42e08 3', mRNA sequence
Length = 594
Score = 217 bits (468), Expect = 2e-055
Identities = 91/172 (52%), Positives = 119/172 (69%)
Frame = -2 / -1
Query: 808 KKLQEEVRRNVPAGQEMVTEDNLPGMTDLKAVIKETLRXXXXXXXXXXHYSLDACEVAGY 629
KKLQ+EVR VP GQE+++E ++ MT L+AVIKE+LR H ++ C + GY
Sbjct: 564 KKLQDEVRGIVPQGQEIISETDMNNMTYLRAVIKESLRLRPVAPLLAPHLAMADCIIDGY 385
Query: 628 TIPANTRVVVNAWALGRHSGYWERENEFVPERFLSGDVAGGVDLKPNEFQFLAFGSGRRM 449
+PA TRVVVNAWA+GR WE EF+PERF ++ K N+FQFL FG+GRRM
Sbjct: 384 IVPAGTRVVVNAWAIGRDPSSWEYPEEFIPERFTDEGSTMHINFKGNDFQFLPFGAGRRM 205
Query: 448 CPGVHSASATIEAMLSNLMYRFDWQLPAGMKAEDVDMTEVFGITVSRKEKLL 293
CPG++ A +E ML+NL+ FDW+LP G+ +D+DMTEVFG+TV RKEKLL
Sbjct: 204 CPGMNLGIANVELMLANLVCHFDWELPLGVGRKDIDMTEVFGLTVRRKEKLL 49
Score = 77.6 bits (163), Expect(2) = 2e-025
Identities = 33/68 (48%), Positives = 45/68 (66%)
Frame = +2 / +1
Query: 302 LLPRDRDPKHLGHVHVLRLHPRRQLPVEPVHEVGQHRLDGRGRRVDPRAHPPPGPERQEL 481
LLP D PKHL H++V +P+ + PV+ H+V QH+LD R V RAHPP + QEL
Sbjct: 58 LLPTDG*PKHLCHINVFSPNPKGKFPVKMAHKVCQHKLDIRDSEVHTRAHPPSCSKWQEL 237
Query: 482 ELVGLEVD 505
+++ LEVD
Sbjct: 238 KIIPLEVD 261
Score = 59.7 bits (124), Expect(2) = 2e-025
Identities = 32/75 (42%), Positives = 37/75 (49%)
Frame = +3 / +2
Query: 582 PSAQALTTTRVLAGMV*PATSQAXXXXXXXXXXXXXXXXXXXLMTALRSVMPGRLSSVTI 761
P A ALTTTRV AG + P+ Q+ MTALR V+ S+ I
Sbjct: 338 PMAHALTTTRVPAGTMYPSMMQSAMARCGARRGATGRSRSDSFMTALRYVILFMSVSLII 517
Query: 762 SCPAGTFRRTSSCSF 806
SCP GT TSSCSF
Sbjct: 518 SCPWGTIPLTSSCSF 562
>gb|AV917596.1|AV917596 AV917596 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags10j16 3', mRNA sequence
Length = 644
Score = 182 bits (391), Expect(2) = 7e-054
Identities = 66/123 (53%), Positives = 90/123 (73%)
Frame = -2 / -3
Query: 646 CEVAGYTIPANTRVVVNAWALGRHSGYWERENEFVPERFLSGDVAGGVDLKPNEFQFLAF 467
C + GY +PA T ++VN WA+GR S WE E++PERF+ A V+ K N+FQFL F
Sbjct: 441 CNIVGYMVPAGTHILVNVWAIGRDSNSWEDAEEYIPERFIDEGSAVHVNFKGNDFQFLPF 262
Query: 466 GSGRRMCPGVHSASATIEAMLSNLMYRFDWQLPAGMKAEDVDMTEVFGITVSRKEKLLLV 287
G+GRRMCPG++ +E ML+NL+Y FDW+LP G+ +D+DM EVFG+T+ RKEKLLLV
Sbjct: 261 GAGRRMCPGINLGITNVELMLANLIYHFDWELPVGVDRKDIDMAEVFGLTMRRKEKLLLV 82
Query: 286 PQA 278
P++
Sbjct: 81 PKS 73
Score = 96.8 bits (205), Expect(2) = 9e-028
Identities = 54/122 (44%), Positives = 64/122 (52%)
Frame = +3 / +2
Query: 285 GTRSSFSFLETVIPNTSVMSTSSAFIPAGSCQSNRYMRLDSIASMVADAEWTPGHILRPD 464
GT SSFSF V PNTS +S S P GS QS YMR +I+S + + PGHILRP
Sbjct: 80 GTNSSFSFRRMVSPNTSAISMSFLSTPTGSSQSKWYMRFANISSTLVIPRFIPGHILRPA 259
Query: 465 PNARNWNSLGLRSTPPATSPLRNLSGTNSFSRSQ*PLWRPSAQALTTTRVLAGMV*PATS 644
PN +N S L+ T A NLSG S + S P A LT V AG +*P
Sbjct: 260 PNGKN*KSFPLKLT*TALPSSMNLSGMYSSASSHELESLPMAHTLTRMCVPAGTM*PTML 439
Query: 645 QA 650
Q+
Sbjct: 440 QS 445
Score = 50.6 bits (104), Expect(2) = 7e-054
Identities = 21/37 (56%), Positives = 27/37 (72%)
Frame = -2 / -2
Query: 850 EFAMTELIRKPHLMKKLQEEVRRNVPAGQEMVTEDNL 740
EF + EL+R+P LM KLQ+EVR VP GQE V E ++
Sbjct: 643 EFTLAELMRRPSLMGKLQDEVRSIVPLGQETVIETDI 533
Score = 48.3 bits (99), Expect(2) = 9e-028
Identities = 21/34 (61%), Positives = 23/34 (67%)
Frame = +3 / +3
Query: 750 SVTISCPAGTFRRTSSCSFFIRCGFRMSSVMANS 851
S+T+SCP GT TSSCSF IR G MSS NS
Sbjct: 543 SMTVSCPRGTILLTSSCSFPIRDGLLMSSAKVNS 644
>gb|BJ453643.1|BJ453643 BJ453643 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak43p03 5', mRNA sequence
Length = 589
Score = 201 bits (434), Expect(2) = 2e-053
Identities = 84/169 (49%), Positives = 112/169 (66%)
Frame = -2 / +2
Query: 832 LIRKPHLMKKLQEEVRRNVPAGQEMVTEDNLPGMTDLKAVIKETLRXXXXXXXXXXHYSL 653
L++ PHLM KLQ EVR + G+EMVTE +L LKAVIKETLR H S+
Sbjct: 2 LMQNPHLMNKLQAEVRSTITKGKEMVTEADLDSXAYLKAVIKETLRLHMPGPLLVPHLSM 181
Query: 652 DACEVAGYTIPANTRVVVNAWALGRHSGYWERENEFVPERFLSGDVAGGVDLKPNEFQFL 473
C V GY IP+ RV++N+WAL R G WE +EF+PERF+ A +D K N+F +L
Sbjct: 182 AECNVNGYIIPSGIRVIINSWALARDPGSWEHADEFMPERFMECGSAATMDYKGNDFSYL 361
Query: 472 AFGSGRRMCPGVHSASATIEAMLSNLMYRFDWQLPAGMKAEDVDMTEVF 326
FG+GRR+CPG++ A ATIE ML+NL+Y F+W+LP + + + MTE+F
Sbjct: 362 PFGTGRRICPGINFAIATIEIMLANLIYHFNWKLPTELMEDGISMTELF 508
Score = 29.0 bits (57), Expect(2) = 2e-053
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = -2 / +3
Query: 328 FGITVSRKEKLLLV 287
FG+TV RKEKLLLV
Sbjct: 507 FGMTVHRKEKLLLV 548
>gb|AV922405.1|AV922405 AV922405 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags18b09 3', mRNA sequence
Length = 618
Score = 209 bits (450), Expect = 6e-053
Identities = 86/162 (53%), Positives = 113/162 (69%)
Frame = -2 / -3
Query: 769 GQEMVTEDNLPGMTDLKAVIKETLRXXXXXXXXXXHYSLDACEVAGYTIPANTRVVVNAW 590
G++ VT+D+L G+ LKAVIKETLR H S+D C + GYTIP+ TR +N +
Sbjct: 616 GKDTVTQDDLHGLPYLKAVIKETLRLHMPGPLMVPHLSMDECIINGYTIPSGTRTFINTY 437
Query: 589 ALGRHSGYWERENEFVPERFLSGDVAGGVDLKPNEFQFLAFGSGRRMCPGVHSASATIEA 410
A+ R WE EF+PERF+ G A +D K N+FQ+ FGSGRR+CPG++ A+ATI+
Sbjct: 436 AIQRDPSNWESPEEFMPERFMEGGSAAAMDYKGNDFQYFPFGSGRRICPGINFATATIQL 257
Query: 409 MLSNLMYRFDWQLPAGMKAEDVDMTEVFGITVSRKEKLLLVP 284
ML+NLMY FDW+LP + E ++MTE FG+TV RKEKLLLVP
Sbjct: 256 MLTNLMYHFDWKLPPESEEEGINMTETFGLTVHRKEKLLLVP 131
>gb|BG344914.2|BG344914 HVSMEg0016N10f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0016N10f, mRNA sequence
Length = 633
Score = 199 bits (429), Expect(2) = 3e-052
Identities = 87/141 (61%), Positives = 106/141 (75%)
Frame = -2 / +1
Query: 1660 IIGHLHLMGDIPYVSLAALATRYGPDLMLLRLGAVPTVVVSSPRVAEAVLRTYDHVFSSR 1481
IIGHLHL+G +P+VSL LA ++GPDLMLLRLGAVPT+VVSSPR AEAVLRT+DHV +SR
Sbjct: 157 IIGHLHLVGSLPHVSLRDLARKHGPDLMLLRLGAVPTLVVSSPRAAEAVLRTHDHVLASR 336
Query: 1480 PRSLVSDIIMYGATDSCFAPYGDHFRKARKLVTVHLLNASKVRSQRPAREEEVXXXXXXX 1301
PRS+V IIMYG+++ FAPYG H+R+ARKLVT H+L+ KV+S R A EEV
Sbjct: 337 PRSIVPHIIMYGSSNIGFAPYGRHWRQARKLVTTHMLSVKKVQSFRSAAMEEVRVAMAKI 516
Query: 1300 XXXXXXREPVDMSELLHSFVN 1238
VDMSELL++F N
Sbjct: 517 NEAAIAGATVDMSELLNAFSN 579
Score = 144 bits (308), Expect = 2e-033
Identities = 69/137 (50%), Positives = 78/137 (56%)
Frame = +3 / -2
Query: 1257 SSLMXXXXXXXXXXXXXXXXXXXXXXXXXXCDRTLLALSRCTVTSFRALRKWSP*GAKHE 1436
SSLM D T L LS C VTSF A R+ P GAK
Sbjct: 560 SSLMSTVAPAMAASLIFAIATLTSSMAALRKDCTFLTLSMCVVTSFLACRQCLPYGAKPM 381
Query: 1437 SVAPYMMMSDTRERGREEKTWS*VRSTASATRGDETTTVGTAPRRSSIRSGPYLVASAAR 1616
PYMM+ T ERGR+ +TWS VRSTASA RGD+TT VGTAPRR SI+SGP +A + R
Sbjct: 380 LDEPYMMIWGTIERGRDARTWSCVRSTASAARGDDTTRVGTAPRRRSIKSGPCFLARSRR 201
Query: 1617 DT*GMSPIRCRCPMMGS 1667
+T G P RCR PMMGS
Sbjct: 200 ETCGREPTRCRWPMMGS 150
Score = 27.6 bits (54), Expect(2) = 3e-052
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -2 / +3
Query: 1234 LVCRAVSGKFSMEEGRN 1184
+ CR VSGKF ++ GR+
Sbjct: 582 MACRIVSGKFFLQNGRS 632
>gb|AV914567.1|AV914567 AV914567 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags6p16 5', mRNA sequence
Length = 618
Score = 183 bits (395), Expect(2) = 6e-052
Identities = 79/155 (50%), Positives = 102/155 (65%)
Frame = -2 / +1
Query: 916 DHIKAILIDMFEAGTDTSYMTLEFAMTELIRKPHLMKKLQEEVRRNVPAGQEMVTEDNLP 737
DHIKA L+ MFEAGTDTS + LE+AM L++ P +M LQ EVR +P G++ VT+D+L
Sbjct: 154 DHIKAQLLIMFEAGTDTSTIVLEYAMVRLMQNPRVMAMLQAEVRSTIPKGKDTVTQDDLH 333
Query: 736 GMTDLKAVIKETLRXXXXXXXXXXHYSLDACEVAGYTIPANTRVVVNAWALGRHSGYWER 557
G+ LKAVIKETLR H S+D C + GYTIP+ TR +N +A+ R WE
Sbjct: 334 GLPYLKAVIKETLRLHMPGPLMVPHLSMDECIINGYTIPSGTRTFINTYAIQRDPSNWES 513
Query: 556 ENEFVPERFLSGDVAGGVDLKPNEFQFLAFGSGRR 452
EF+PERF+ G A +D K N+FQ+ FGSGRR
Sbjct: 514 PEEFMPERFMEGGSAAAMDYKGNDFQYFPFGSGRR 618
Score = 42.3 bits (86), Expect(2) = 6e-052
Identities = 19/37 (51%), Positives = 25/37 (67%)
Frame = -2 / +3
Query: 1030 DKLIDDHAARMATHQDEDDDKDFIYVLLSLQKEYGLT 920
D L+D AT D+D+DFI+VLLS+Q+EY LT
Sbjct: 39 DDLLDRLIDEHATPPALDEDRDFIHVLLSVQQEYNLT 149
>gb|BE196002.1|BE196002 HVSMEh0091B12f Hordeum vulgare 5-45 DAP spike EST library HVcDNA0009
(5 to 45 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEh0091B12f, mRNA sequence
Length = 904
Score = 204 bits (441), Expect = 1e-051
Identities = 89/141 (63%), Positives = 109/141 (77%)
Frame = -2 / +3
Query: 1660 IIGHLHLMGDIPYVSLAALATRYGPDLMLLRLGAVPTVVVSSPRVAEAVLRTYDHVFSSR 1481
IIGHLHL+G +P+VSL LA ++GPD+MLLRLGAVPT+VVSSPR AEAVLRT+DHV +SR
Sbjct: 135 IIGHLHLVGSLPHVSLRGLARKHGPDVMLLRLGAVPTLVVSSPRAAEAVLRTHDHVLASR 314
Query: 1480 PRSLVSDIIMYGATDSCFAPYGDHFRKARKLVTVHLLNASKVRSQRPAREEEVXXXXXXX 1301
PRSLV+DIIMYG++D FAPYG+++R+ARKLVT H+L+ KVRS R A EE
Sbjct: 315 PRSLVTDIIMYGSSDIGFAPYGEYWRQARKLVTTHMLSVKKVRSFRSAAIEEASMAMGKI 494
Query: 1300 XXXXXXREPVDMSELLHSFVN 1238
R VDMSELL++F N
Sbjct: 495 NEAAIARATVDMSELLNAFSN 557
Score = 167 bits (359), Expect = 2e-040
Identities = 73/106 (68%), Positives = 79/106 (74%)
Frame = +3 / -1
Query: 1350 DRTLLALSRCTVTSFRALRKWSP*GAKHESVAPYMMMSDTRERGREEKTWS*VRSTASAT 1529
DRT LS C VTSF A R++SP GAK S PYMMMS TRERGR+ KTWS VRSTASA
Sbjct: 445 DRTFFTLSMCVVTSFLACRQYSPYGAKPMSEEPYMMMSVTRERGRDAKTWSCVRSTASAA 266
Query: 1530 RGDETTTVGTAPRRSSIRSGPYLVASAARDT*GMSPIRCRCPMMGS 1667
RGD+TT+VGTAPRR SI SGP +A RDT G P RCRCPMMGS
Sbjct: 265 RGDDTTSVGTAPRRRSITSGPCFLARPRRDTCGREPTRCRCPMMGS 128
>gb|AV935198.1|AV935198 AV935198 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal3e02 3', mRNA sequence
Length = 597
Score = 204 bits (439), Expect = 2e-051
Identities = 84/163 (51%), Positives = 113/163 (69%)
Frame = -2 / -3
Query: 766 QEMVTEDNLPGMTDLKAVIKETLRXXXXXXXXXXHYSLDACEVAGYTIPANTRVVVNAWA 587
QE+++E ++ MT L+AVIKE+LR H ++ C + GY +PA TRVVVNAWA
Sbjct: 595 QEIISETDMNNMTYLRAVIKESLRLHPVAPLLAPHLAMADCIIDGYIVPAGTRVVVNAWA 416
Query: 586 LGRHSGYWERENEFVPERFLSGDVAGGVDLKPNEFQFLAFGSGRRMCPGVHSASATIEAM 407
+GR WE EF+PERF ++ K N+FQFL FG+GRRMCPG++ A +E M
Sbjct: 415 IGRDPSSWEYPEEFIPERFTDEGSTMHINFKGNDFQFLPFGAGRRMCPGMNLGIANVELM 236
Query: 406 LSNLMYRFDWQLPAGMKAEDVDMTEVFGITVSRKEKLLLVPQA 278
L+NL+ FDW+LP G+ +D+DMTEVFG+TV RKEKLLLVP++
Sbjct: 235 LANLVCHFDWELPLGVGRKDIDMTEVFGLTVRRKEKLLLVPKS 107
>gb|BE214490.1|BE214490 HV_CEb0003J19f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0003J19f, mRNA sequence
Length = 707
Score = 162 bits (348), Expect(2) = 2e-051
Identities = 71/112 (63%), Positives = 85/112 (75%)
Frame = -2 / +3
Query: 1660 IIGHLHLMGDIPYVSLAALATRYGPDLMLLRLGAVPTVVVSSPRVAEAVLRTYDHVFSSR 1481
+IGHLHL+G +P+VS LA ++G DLMLLRLGAV T VVSSPR A AVLRT+DH +SR
Sbjct: 165 VIGHLHLVGPLPHVSFRDLANKHGRDLMLLRLGAVNTGVVSSPRAAAAVLRTHDHALASR 344
Query: 1480 PRSLVSDIIMYGATDSCFAPYGDHFRKARKLVTVHLLNASKVRSQRPAREEE 1325
RS V DII Y TD FAPYG+ +R+ARK+VT H+L+A KV S R REEE
Sbjct: 345 SRSAVDDIIFYKRTDVAFAPYGEPWRQARKVVTTHMLSARKVNSFRHDREEE 500
Score = 114 bits (244), Expect = 2e-024
Identities = 55/104 (52%), Positives = 67/104 (64%)
Frame = +3 / -2
Query: 1356 TLLALSRCTVTSFRALRKWSP*GAKHESVAPYMMMSDTRERGREEKTWS*VRSTASATRG 1535
T ALS C VT+F A + SP*GAK SV MMS T ER + WS VR TA+A RG
Sbjct: 469 TFRALSMCVVTTFLACLQGSP*GAKATSVRL*KMMSSTAERDLDASAWSCVRRTAAAARG 290
Query: 1536 DETTTVGTAPRRSSIRSGPYLVASAARDT*GMSPIRCRCPMMGS 1667
++TT V TAPRR S+RS P L+A + ++T G P R RCP+ GS
Sbjct: 289 EDTTPVFTAPRRRSMRSRPCLLARSRKETCGRGPTRWRCPITGS 158
Score = 62.0 bits (129), Expect(2) = 2e-051
Identities = 26/49 (53%), Positives = 34/49 (69%)
Frame = -2 / +3
Query: 1276 PVDMSELLHSFVNNLVCRAVSGKFSMEEGRNRLFRELTDINAGLLGGFH 1130
PVDMSELL S+ N+LVC V G+ + GRN+L R+L IN L+G F+
Sbjct: 558 PVDMSELLGSYANDLVCPVVLGRNHRDNGRNKLVRQLIGINMALVGRFN 704
>gb|AY989887.1| Hordeum vulgare subsp. vulgare cytochrome P450 monooxygenase
CYP71U4v2 mRNA, complete cds
Length = 1578
Score = 82.2 bits (173), Expect(6) = 4e-051
Identities = 36/87 (41%), Positives = 54/87 (62%)
Frame = -2 / +1
Query: 1582 LMLLRLGAVPTVVVSSPRVAEAVLRTYDHVFSSRPRSLVSDIIMYGATDSCFAPYGDHFR 1403
+MLLRLG VP V+VS+P A VL+T D F++R D++ + FAPYG+H+R
Sbjct: 208 VMLLRLGEVPNVIVSTPEAAMLVLKTNDLTFATRTSGPTLDVVGSASEGIIFAPYGEHWR 387
Query: 1402 KARKLVTVHLLNASKVRSQRPAREEEV 1322
+ RK+ V LL+A +VR + + E+
Sbjct: 388 QMRKVCVVELLSAMQVRRIQSIMQAEI 468
Score = 80.8 bits (170), Expect(6) = 4e-051
Identities = 31/64 (48%), Positives = 42/64 (65%)
Frame = -2 / +1
Query: 481 QFLAFGSGRRMCPGVHSASATIEAMLSNLMYRFDWQLPAGMKAEDVDMTEVFGITVSRKE 302
+F+ FG+GRR CPG A+ +E +L+NL+Y FDW +P G E +DM EVFGI V +
Sbjct: 1333 EFVPFGAGRRQCPGALFATTMLELVLANLLYHFDWAIPGGESPETMDMGEVFGIIVHTRS 1512
Query: 301 KLLL 290
L L
Sbjct: 1513 SLHL 1524
Score = 56.5 bits (117), Expect(6) = 4e-051
Identities = 23/50 (46%), Positives = 34/50 (68%)
Frame = -2 / +1
Query: 931 YGLTRDHIKAILIDMFEAGTDTSYMTLEFAMTELIRKPHLMKKLQEEVRR 782
+ LT + I A++ D+F A TDT+ TLE+AM EL+R P M + + EVR+
Sbjct: 886 FPLTSEIISAVIFDIFSAATDTTAATLEWAMAELVRNPRAMARAKLEVRQ 1035
Score = 42.3 bits (86), Expect(6) = 4e-051
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = -2 / +1
Query: 658 SLDACEVAGYTIPANTRVVVNAWALGRHSGYW 563
S + C V GY IP T V++NA+A+GR +W
Sbjct: 1159 SQENCRVMGYDIPKGTAVMINAFAVGRDPAHW 1254
Score = 25.8 bits (50), Expect(6) = 4e-051
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -2 / +1
Query: 757 VTEDNLPGMTDLKAVIKETLR 695
+T +L G+ L+ VIKETLR
Sbjct: 1063 ITSADLAGLHYLRMVIKETLR 1125
Score = 23.1 bits (44), Expect(6) = 4e-051
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = -2 / +1
Query: 1273 VDMSELLHSFVNNLVCRAVSGKFSMEE 1193
VD+ + L NN++ RAV G S ++
Sbjct: 529 VDVGKGLARLTNNVIARAVFGGKSRQQ 609
>gb|CA017939.1|CA017939 HV06O02r HV Hordeum vulgare subsp. vulgare cDNA clone HV06O02
5-PRIME, mRNA sequence
Length = 500
Score = 200 bits (432), Expect = 2e-050
Identities = 84/164 (51%), Positives = 114/164 (69%)
Frame = -2 / +2
Query: 1570 RLGAVPTVVVSSPRVAEAVLRTYDHVFSSRPRSLVSDIIMYGATDSCFAPYGDHFRKARK 1391
RLGAVPT+VVS+P A+AVLRT+DHVF+SRP S V+ I+ YG+ D FAPYG H+R+ +K
Sbjct: 8 RLGAVPTLVVSTPAAAQAVLRTHDHVFASRPHSPVAHILFYGSADVVFAPYGHHWRQVKK 187
Query: 1390 LVTVHLLNASKVRSQRPAREEEVXXXXXXXXXXXXXREPVDMSELLHSFVNNLVCRAVSG 1211
+ T HLL A KV S R AR+ EV +DMSELL++FV ++VC AV+G
Sbjct: 188 ISTTHLLTARKVHSYRHARQHEVNLVLAKVRDAMRAGVALDMSELLNAFVFDIVCHAVAG 367
Query: 1210 KFSMEEGRNRLFRELTDINAGLLGGFHIQDYFPRLGRIELVRKV 1079
E G N+ FREL + NA L+GGF+++D+FP L ++E+ RK+
Sbjct: 368 NSFRERGLNKHFRELVEANASLIGGFNLEDHFPALVKLEIFRKI 499
Score = 74.8 bits (157), Expect(2) = 1e-023
Identities = 38/70 (54%), Positives = 42/70 (60%)
Frame = +3 / -3
Query: 1356 TLLALSRCTVTSFRALRKWSP*GAKHESVAPYMMMSDTRERGREEKTWS*VRSTASATRG 1535
T LA+SR V F R+W P*GAK S P M T E G + TWS VRSTA A G
Sbjct: 222 TFLAVSRWVVEIFLTWRQWWP*GAKTTSAEP*KRMWATGEWGLDANTWSCVRSTACAAAG 43
Query: 1536 DETTTVGTAP 1565
ETT+VGTAP
Sbjct: 42 VETTSVGTAP 13
Score = 56.5 bits (117), Expect(2) = 1e-023
Identities = 30/65 (46%), Positives = 39/65 (60%)
Frame = +2 / -2
Query: 1106 QPREVVLDVEPSEEARVDVGELPEQPVAAFLHGELAGDGAADEVVDEGVQELAHVDGLPR 1285
Q REVVL VE ++E V + +LPE V + L +A G A +V DEGV++LAHV G
Sbjct: 472 QCREVVLQVEAADERGVGLHQLPEVLVESSLPERIACHGVAHDVEDEGVEQLAHV*GNAC 293
Query: 1286 GGGAA 1300
G A
Sbjct: 292 AHGVA 278
>gb|BG301073.1|BG301073 HVSMEb0019H09f Hordeum vulgare seedling shoot EST library HVcDNA0002
(Dehydration stress) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEb0019H09f, mRNA sequence
Length = 578
Score = 181 bits (389), Expect(2) = 2e-050
Identities = 78/152 (51%), Positives = 103/152 (67%)
Frame = -2 / +3
Query: 1582 LMLLRLGAVPTVVVSSPRVAEAVLRTYDHVFSSRPRSLVSDIIMYGATDSCFAPYGDHFR 1403
LML+RLGAVPT+VVS+P A+AVLRT+DHVF+ RP S V+ I+ YG+ D FAPYG H+R
Sbjct: 123 LMLVRLGAVPTLVVSTPAAAQAVLRTHDHVFAXRPHSPVAHILFYGSADVVFAPYGHHWR 302
Query: 1402 KARKLVTVHLLNASKVRSQRPAREEEVXXXXXXXXXXXXXREPVDMSELLHSFVNNLVCR 1223
+ +K+ T HLL A KV S R AR+ EV +DMSELL++FV ++VC
Sbjct: 303 QVKKISTTHLLTARKVHSYRHARQHEVNLVLAKVRDAMRAGVALDMSELLNAFVFDIVCH 482
Query: 1222 AVSGKFSMEEGRNRLFRELTDINAGLLGGFHI 1127
A +G E G N+ FREL + NA L+GGF++
Sbjct: 483 AGAGNSFRERGLNKHFRELVEANASLIGGFNL 578
Score = 83.1 bits (175), Expect(2) = 7e-023
Identities = 42/76 (55%), Positives = 47/76 (61%)
Frame = +3 / -2
Query: 1356 TLLALSRCTVTSFRALRKWSP*GAKHESVAPYMMMSDTRERGREEKTWS*VRSTASATRG 1535
T LA+SR V F R+W P*GAK S P M T E G TWS VRSTA A G
Sbjct: 349 TFLAVSRWVVEIFLTWRQWWP*GAKTTSAEP*KRMWATGEWGLXANTWSCVRSTACAAAG 170
Query: 1536 DETTTVGTAPRRSSIR 1583
ETT+VGTAPRR+S+R
Sbjct: 169 VETTSVGTAPRRTSMR 122
Score = 45.5 bits (93), Expect(2) = 7e-023
Identities = 24/57 (42%), Positives = 33/57 (57%)
Frame = +2 / -1
Query: 1130 VEPSEEARVDVGELPEQPVAAFLHGELAGDGAADEVVDEGVQELAHVDGLPRGGGAA 1300
VE ++E V + +LPE V + L +A G A +V DEGV++LAHV G G A
Sbjct: 575 VEAADERGVGLHQLPEVLVESSLPERIACPGVAHDVEDEGVEQLAHV*GNACAHGVA 405
Score = 40.0 bits (81), Expect(2) = 2e-050
Identities = 15/30 (50%), Positives = 22/30 (73%)
Frame = -2 / +3
Query: 1660 IIGHLHLMGDIPYVSLAALATRYGPDLMLL 1571
+IGHLH +G +P+VSL LA +G D ++L
Sbjct: 42 VIGHLHQVGPLPHVSLRHLAAEHGRDGLML 131
>gb|BJ463196.1|BJ463196 BJ463196 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags26d07 5', mRNA sequence
Length = 578
Score = 164 bits (352), Expect(2) = 3e-050
Identities = 72/139 (51%), Positives = 95/139 (68%)
Frame = -2 / +2
Query: 976 DDKDFIYVLLSLQKEYGLTRDHIKAILIDMFEAGTDTSYMTLEFAMTELIRKPHLMKKLQ 797
DD D+I+ LLS+QKEY LTR+ +KA L+ MF AGTDTSY+ +E+AM L++ P LM KLQ
Sbjct: 155 DDTDYIHDLLSIQKEYNLTREQVKAQLVIMFGAGTDTSYIVMEYAMARLMQNPDLMTKLQ 334
Query: 796 EEVRRNVPAGQEMVTEDNLPGMTDLKAVIKETLRXXXXXXXXXXHYSLDACEVAGYTIPA 617
EVR ++P G+ MV ED+L + LKAVIKETLR H ++ C + GYTIP+
Sbjct: 335 AEVRSSIPKGKHMVIEDDLNHLAYLKAVIKETLRLHMPAPLLVPHLAMADCVINGYTIPS 514
Query: 616 NTRVVVNAWALGRHSGYWE 560
TRV+VN+ A+ R WE
Sbjct: 515 GTRVIVNSRAIARDPSSWE 571
Score = 96.8 bits (205), Expect(2) = 3e-026
Identities = 56/125 (44%), Positives = 67/125 (53%)
Frame = +3 / -3
Query: 588 AQALTTTRVLAGMV*PATSQAXXXXXXXXXXXXXXXXXXXLMTALRSVMPGRLSSVTISC 767
A+ LT TRV GMV*P +Q+ LMTA R R SS+T+
Sbjct: 543 ARLLTMTRVPDGMV*PFMTQSAMARWGTRSGAGM*SRSVSLMTAFR*ARWLRSSSMTMCF 364
Query: 768 PAGTFRRTSSCSFFIRCGFRMSSVMANSNVMYEVSVPASNMSIKIALIWSLVRPYSF*RD 947
P G TS+CS +R GF MS MA S MY+VSVPA NM AL SLVR YSF* +
Sbjct: 363 PLGMLLLTSACSLVMRSGFCMSRAMAYSITMYDVSVPAPNMITN*ALTCSLVRLYSF*IE 184
Query: 948 SNTYM 962
S ++M
Sbjct: 183 SKSWM 169
Score = 56.5 bits (117), Expect(2) = 3e-050
Identities = 20/49 (40%), Positives = 32/49 (65%)
Frame = -2 / +2
Query: 1117 FPRLGRIELVRKVACAKTRRVRKRWDDLLDKLIDDHAARMATHQDEDDD 971
FP L +++++R + C + RRV K WDDLL+ LI +H ++ A +D D
Sbjct: 20 FPELLKLDIIRWMVCGRARRVNKMWDDLLESLIHEHESKPAPALGDDTD 166
Score = 43.2 bits (88), Expect(2) = 3e-026
Identities = 19/39 (48%), Positives = 25/39 (64%)
Frame = +2 / -2
Query: 1010 MVVDELVEEVVPALPDSPGLGARHLPDELDPAQPREVVL 1126
M +DE E+VVP L SPG A H PD++ Q REV++
Sbjct: 127 MFMDEAFEQVVPHLVHSPGPAANHPPDDVQLQQLREVLV 11
>emb|AJ495774.1|HVU495774 Hordeum vulgare partial mRNA for putative cytochrome P450
Length = 1790
Score = 82.2 bits (173), Expect(6) = 4e-050
Identities = 36/87 (41%), Positives = 54/87 (62%)
Frame = -2 / +2
Query: 1582 LMLLRLGAVPTVVVSSPRVAEAVLRTYDHVFSSRPRSLVSDIIMYGATDSCFAPYGDHFR 1403
+MLLRLG VP V+VS+P A VL+T D F++R D++ + FAPYG+H+R
Sbjct: 272 VMLLRLGEVPNVIVSTPEAAVLVLKTNDLTFATRTSGPTLDVVGSASEGIIFAPYGEHWR 451
Query: 1402 KARKLVTVHLLNASKVRSQRPAREEEV 1322
+ RK+ V LL+A +VR + + E+
Sbjct: 452 QMRKVCVVELLSAMQVRRIQSIMQAEI 532
Score = 80.3 bits (169), Expect(6) = 4e-050
Identities = 31/64 (48%), Positives = 42/64 (65%)
Frame = -2 / +2
Query: 481 QFLAFGSGRRMCPGVHSASATIEAMLSNLMYRFDWQLPAGMKAEDVDMTEVFGITVSRKE 302
+F+ FG+GRR CPG A+ +E +L+NL+Y FDW +P G E +DM EVFGI V +
Sbjct: 1397 EFVPFGAGRRQCPGALFATTMLELVLANLLYHFDWAIPGGESPEAMDMGEVFGIIVHTRS 1576
Query: 301 KLLL 290
L L
Sbjct: 1577 SLHL 1588
Score = 54.2 bits (112), Expect(6) = 4e-050
Identities = 22/50 (44%), Positives = 33/50 (66%)
Frame = -2 / +2
Query: 931 YGLTRDHIKAILIDMFEAGTDTSYMTLEFAMTELIRKPHLMKKLQEEVRR 782
+ LT + I A++ D+F A TDT+ TLE+AM EL+ P M + + EVR+
Sbjct: 950 FXLTSEIISAVIFDIFSAATDTTAATLEWAMAELVXNPQAMARAKLEVRQ 1099
Score = 42.3 bits (86), Expect(6) = 4e-050
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = -2 / +2
Query: 658 SLDACEVAGYTIPANTRVVVNAWALGRHSGYW 563
S + C V GY IP T V++NA+A+GR +W
Sbjct: 1223 SQENCRVMGYDIPKGTAVMINAFAVGRDPAHW 1318
Score = 25.8 bits (50), Expect(6) = 4e-050
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -2 / +2
Query: 757 VTEDNLPGMTDLKAVIKETLR 695
+T +L G+ L+ VIKETLR
Sbjct: 1127 ITSADLAGLHYLRMVIKETLR 1189
Score = 23.1 bits (44), Expect(6) = 4e-050
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = -2 / +2
Query: 1273 VDMSELLHSFVNNLVCRAVSGKFSMEE 1193
VD+ + L NN++ RAV G S ++
Sbjct: 593 VDVGKGLARLTNNVIARAVFGGKSRQQ 673
>gb|BF621561.1|BF621561 HVSMEa0011G21f Hordeum vulgare seedling shoot EST library HVcDNA0001
(Cold stress) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEa0011G21f, mRNA sequence
Length = 860
Score = 172 bits (371), Expect(3) = 8e-050
Identities = 74/150 (49%), Positives = 98/150 (65%)
Frame = -2 / +3
Query: 1582 LMLLRLGAVPTVVVSSPRVAEAVLRTYDHVFSSRPRSLVSDIIMYGATDSCFAPYGDHFR 1403
LMLLRLG+VPT++V+S A AVLRT+D VF+SRP + +DII YG +D F PYGDH+R
Sbjct: 249 LMLLRLGSVPTLIVTSSNAARAVLRTHDDVFASRPHNPATDIIFYGPSDIAFCPYGDHWR 428
Query: 1402 KARKLVTVHLLNASKVRSQRPAREEEVXXXXXXXXXXXXXREPVDMSELLHSFVNNLVCR 1223
+ +K+ HLL A+KVRS R AREEE +D+ ELL +F N+V
Sbjct: 429 QVKKIAMTHLLTANKVRSYRQAREEEACLVVAKLRDAMAAGAALDLGELLSAFYTNIVGH 608
Query: 1222 AVSGKFSMEEGRNRLFRELTDINAGLLGGF 1133
AV GK ++G +LFREL + N+ L+GGF
Sbjct: 609 AVCGKSFRQKGHEKLFRELVETNSLLIGGF 698
Score = 38.6 bits (78), Expect(3) = 8e-050
Identities = 14/30 (46%), Positives = 22/30 (73%)
Frame = -2 / +3
Query: 1660 IIGHLHLMGDIPYVSLAALATRYGPDLMLL 1571
+IGHLH++G P+VSL LA ++ D ++L
Sbjct: 168 VIGHLHMVGSQPHVSLGDLAAKHSRDGLML 257
Score = 25.8 bits (50), Expect(3) = 8e-050
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = -2 / +2
Query: 1135 FHIQDYFPRLGRIELVRKVAC 1073
FH+ DYF L ++ ++R + C
Sbjct: 695 FHVGDYFLELLKLGIIRCMVC 757
>gb|BJ464184.1|BJ464184 BJ464184 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags33d19 5', mRNA sequence
Length = 597
Score = 198 bits (426), Expect = 1e-049
Identities = 89/180 (49%), Positives = 118/180 (65%)
Frame = -2 / +1
Query: 1051 KRWDDLLDKLIDDHAARMATHQDEDDDKDFIYVLLSLQKEYGLTRDHIKAILIDMFEAGT 872
+R ++ D L+D AT D+D+DFI+VLLS+Q+EY LTRDHIKA L+ MFEAGT
Sbjct: 55 RRVNNKWDDLLDRLIDEHATPPALDEDRDFIHVLLSVQQEYNLTRDHIKAQLLIMFEAGT 234
Query: 871 DTSYMTLEFAMTELIRKPHLMKKLQEEVRRNVPAGQEMVTEDNLPGMTDLKAVIKETLRX 692
DTS + LE+AM L++ P +M LQ EVR +P G++ VT+D+L G+ LKAVIKETLR
Sbjct: 235 DTSTIVLEYAMVRLMQNPRVMAMLQAEVRSTIPKGKDTVTQDDLHGLPYLKAVIKETLRL 414
Query: 691 XXXXXXXXXHYSLDACEVAGYTIPANTRVVVNAWALGRHSGYWERENEFVPERFLSGDVA 512
H S+D C + GYTIP+ TR +N +A+ R WE EF+PERF+ G A
Sbjct: 415 HMPGPLMVPHLSMDECIINGYTIPSGTRTFINTYAIQRDPSNWESPEEFMPERFMEGGSA 594
Score = 89.0 bits (188), Expect(2) = 6e-024
Identities = 46/86 (53%), Positives = 55/86 (63%)
Frame = +3 / -2
Query: 708 LMTALRSVMPGRLSSVTISCPAGTFRRTSSCSFFIRCGFRMSSVMANSNVMYEVSVPASN 887
L+TA R P R S VT+S P G TS+CS + GF +S MA S+ M +VSVPASN
Sbjct: 398 LITAFR*GRPWRSSWVTVSFPLGMVLLTSACSMAMTRGFCISRTMAYSSTMVDVSVPASN 219
Query: 888 MSIKIALIWSLVRPYSF*RDSNTYMK 965
M ALIWSLVR YS * +S T+MK
Sbjct: 218 MISN*ALIWSLVRLYSC*TESKTWMK 141
Score = 43.2 bits (88), Expect(2) = 6e-024
Identities = 18/38 (47%), Positives = 25/38 (65%)
Frame = +2 / -1
Query: 1004 GRMVVDELVEEVVPALPDSPGLGARHLPDELDPAQPRE 1117
GRM +DE +E+VVP + SPGLGA + ++ Q RE
Sbjct: 114 GRMFIDEPIEQVVPLVVYSPGLGANNFSEDFQLHQCRE 1
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 670,164,600
Number of Sequences: 312970
Number of extensions: 9949640
Number of successful extensions: 115108
Number of sequences better than 1.0e-020: 215
length of database: 58,378,179
effective HSP length: 54
effective length of database: 41,477,799
effective search space used: 25965102174
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)