TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 5705280.3.1
(980 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BF621515.2|BF621515 HVSMEa0011D23f Hordeum vulgare seedl... 163 2e-076
gb|CA007660.1|CA007660 HU08K05r HU Hordeum vulgare subsp. v... 61 1e-031
gb|BM443591.2|BM443591 EBro02_SQ005_M19_R root, 3 week, hyd... 47 3e-015
gb|AL505172.1|AL505172 AL505172 Hordeum vulgare Barke roots... 47 8e-009
gb|BE195366.3|BE195366 HVSMEh0089A15f Hordeum vulgare 5-45 ... 45 5e-004
gb|BE602116.3|BE602116 HVSMEh0102I16f Hordeum vulgare 5-45 ... 36 0.002
gb|CA030543.1|CA030543 HX07F24r HX Hordeum vulgare subsp. v... 39 0.045
gb|BE214460.3|BE214460 HV_CEb0003I09f Hordeum vulgare seedl... 32 0.13
gb|BG369649.1|BG369649 HVSMEi0025F09f Hordeum vulgare 20 DA... 37 0.14
gb|BQ464229.1|BQ464229 HF01L05T HF Hordeum vulgare subsp. v... 37 0.14
gb|AL505237.1|AL505237 AL505237 Hordeum vulgare Barke roots... 32 0.16
gb|BI952203.1|BI952203 HVSMEm0004P22f Hordeum vulgare green... 36 0.41
gb|BE193175.2|BE193175 HVSMEh0080A09f Hordeum vulgare 5-45 ... 28 0.44
gb|BU990386.1|BU990386 HF24N24r HF Hordeum vulgare subsp. v... 35 0.51
gb|BG366251.1|BG366251 HVSMEi0006G12f Hordeum vulgare 20 DA... 25 0.60
gb|BG367361.2|BG367361 HVSMEi0012A01f Hordeum vulgare 20 DA... 25 0.66
gb|BQ665491.1|BQ665491 HX03N13u HX Hordeum vulgare subsp. v... 35 0.71
gb|BU976387.1|BU976387 HA03J23u HA Hordeum vulgare subsp. v... 35 0.71
gb|BU977322.1|BU977322 HA11D14u HA Hordeum vulgare subsp. v... 35 0.71
gb|CA030898.1|CA030898 HX08H06r HX Hordeum vulgare subsp. v... 35 0.71
gb|CB876569.1|CB876569 HX11K24w HX Hordeum vulgare subsp. v... 35 0.71
gb|AL500518.1|AL500518 AL500518 Hordeum vulgare Barke etiol... 35 0.77
gb|BF262190.2|BF262190 HV_CEa0003J03f Hordeum vulgare seedl... 35 0.77
gb|AL501447.1|AL501447 AL501447 Hordeum vulgare Barke roots... 34 0.97
gb|AL503028.1|AL503028 AL503028 Hordeum vulgare Barke roots... 34 0.97
gb|AL504111.1|AL504111 AL504111 Hordeum vulgare Barke roots... 34 0.97
gb|AL505775.1|AL505775 AL505775 Hordeum vulgare Barke roots... 34 0.97
gb|AL507086.1|AL507086 AL507086 Hordeum vulgare Barke devel... 34 0.97
gb|AL508375.1|AL508375 AL508375 Hordeum vulgare Barke devel... 34 0.97
gb|AL510558.1|AL510558 AL510558 Hordeum vulgare Barke devel... 34 0.97
gb|BF255160.2|BF255160 HVSMEf0006B22f Hordeum vulgare seedl... 34 0.97
gb|BF260173.2|BF260173 HVSMEf0021E20f Hordeum vulgare seedl... 34 0.97
gb|BG343121.2|BG343121 HVSMEg0002H10f Hordeum vulgare pre-a... 34 0.97
gb|AV924971.1|AV924971 AV924971 K. Sato unpublished cDNA li... 34 0.97
gb|AV924972.1|AV924972 AV924972 K. Sato unpublished cDNA li... 34 0.97
gb|BQ470241.1|BQ470241 HX02D21r HX Hordeum vulgare subsp. v... 34 0.97
gb|BQ470496.1|BQ470496 HX03C12r HX Hordeum vulgare subsp. v... 34 0.97
gb|BQ470719.1|BQ470719 HX03N05r HX Hordeum vulgare subsp. v... 34 0.97
gb|BQ470724.1|BQ470724 HX03N13r HX Hordeum vulgare subsp. v... 34 0.97
gb|BQ470761.1|BQ470761 HX03P07r HX Hordeum vulgare subsp. v... 34 0.97
gb|BQ657878.1|BQ657878 HA06K09u HA Hordeum vulgare subsp. v... 34 0.97
gb|BQ659781.1|BQ659781 HF01L05w HF Hordeum vulgare subsp. v... 34 0.97
gb|BQ665355.1|BQ665355 HX03C12u HX Hordeum vulgare subsp. v... 34 0.97
gb|BQ665484.1|BQ665484 HX03N05u HX Hordeum vulgare subsp. v... 34 0.97
gb|BQ665513.1|BQ665513 HX03P07u HX Hordeum vulgare subsp. v... 34 0.97
gb|BQ763724.1|BQ763724 EBro03_SQ005_B08 _R root, 3 week, wa... 34 0.97
gb|BU976229.1|BU976229 HA03F22u HA Hordeum vulgare subsp. v... 34 0.97
gb|BU976386.1|BU976386 HA03J23r HA Hordeum vulgare subsp. v... 34 0.97
gb|BU977321.1|BU977321 HA11D14r HA Hordeum vulgare subsp. v... 34 0.97
gb|BU978241.1|BU978241 HA12M24r HA Hordeum vulgare subsp. v... 34 0.97
gb|BU978242.1|BU978242 HA12M24u HA Hordeum vulgare subsp. v... 34 0.97
gb|BU978275.1|BU978275 HA12N19u HA Hordeum vulgare subsp. v... 34 0.97
gb|BU979036.1|BU979036 HA14P19r HA Hordeum vulgare subsp. v... 34 0.97
gb|BU979163.1|BU979163 HA15F10r HA Hordeum vulgare subsp. v... 34 0.97
gb|BU983240.1|BU983240 HA29A08r HA Hordeum vulgare subsp. v... 34 0.97
gb|BU998419.1|BU998419 HI11A02r HI Hordeum vulgare subsp. v... 34 0.97
gb|CA024657.1|CA024657 HZ49O22r HZ Hordeum vulgare subsp. v... 34 0.97
gb|CA029928.1|CA029928 HX05J16r HX Hordeum vulgare subsp. v... 34 0.97
gb|CA030709.1|CA030709 HX07O04r HX Hordeum vulgare subsp. v... 34 0.97
gb|CA031386.1|CA031386 HX09M23r HX Hordeum vulgare subsp. v... 34 0.97
gb|CA031723.1|CA031723 HX10P02r HX Hordeum vulgare subsp. v... 34 0.97
gb|CA032195.1|CA032195 HX12E22r HX Hordeum vulgare subsp. v... 34 0.97
gb|CA032381.1|CA032381 HX12N18r HX Hordeum vulgare subsp. v... 34 0.97
gb|CA032581.1|CA032581 HX13I11r HX Hordeum vulgare subsp. v... 34 0.97
gb|CB858327.1|CB858327 HI06J23w HI Hordeum vulgare subsp. v... 34 0.97
gb|CB859610.1|CB859610 HI11A02w HI Hordeum vulgare subsp. v... 34 0.97
gb|CB874456.1|CB874456 HX05F05w HX Hordeum vulgare subsp. v... 34 0.97
gb|CB874549.1|CB874549 HX05J16w HX Hordeum vulgare subsp. v... 34 0.97
gb|CB875299.1|CB875299 HX07O04w HX Hordeum vulgare subsp. v... 34 0.97
gb|CB875942.1|CB875942 HX09M23w HX Hordeum vulgare subsp. v... 34 0.97
gb|CB876024.1|CB876024 HX10A23w HX Hordeum vulgare subsp. v... 34 0.97
gb|CB879318.1|CB879318 HP11L19T HP Hordeum vulgare subsp. v... 34 0.97
gb|CV055599.1|CV055599 BNEL121d6 Barley EST endosperm libra... 34 0.97
gb|CK122920.1|CK122920 BES1824101e06 BES1824 Hordeum vulgar... 34 0.97
gb|CK125231.1|CK125231 BES1824107h04 BES1824 Hordeum vulgar... 34 0.97
gb|BI951055.1|BI951055 HVSMEl0024C19f Hordeum vulgare spike... 26 1.2
gb|CB884152.1|CB884152 HF04P03r HF Hordeum vulgare subsp. v... 27 1.3
gb|BF626608.2|BF626608 HVSMEa0018O04f Hordeum vulgare seedl... 34 1.3
gb|BE194094.2|BE194094 HVSMEh0083P19f Hordeum vulgare 5-45 ... 26 1.7
gb|AV833913.1|AV833913 AV833913 K. Sato unpublished cDNA li... 33 2.0
gb|BF253820.3|BF253820 HVSMEf0002D10f Hordeum vulgare seedl... 33 2.0
gb|BQ760034.1|BQ760034 EBpi07_SQ003_B06_R pistil, 12 DPA, n... 33 2.0
gb|BE454951.3|BE454951 HVSMEh0095K05f Hordeum vulgare 5-45 ... 26 2.3
gb|AL504925.1|AL504925 AL504925 Hordeum vulgare Barke roots... 33 2.5
gb|BI950925.1|BI950925 HVSMEl0023K23f Hordeum vulgare spike... 33 2.5
gb|BE559173.1|BE559173 HV_CEb0023M19f Hordeum vulgare seedl... 33 2.5
gb|BF261426.1|BF261426 HV_CEa0001E02f Hordeum vulgare seedl... 33 2.5
gb|BF266534.3|BF266534 HV_CEa0015G07f Hordeum vulgare seedl... 33 2.5
gb|AV932244.1|AV932244 AV932244 K. Sato unpublished cDNA li... 33 2.5
gb|AJ435669.1|AJ435669 AJ435669 S00002 Hordeum vulgare subs... 33 2.5
gb|BJ470667.1|BJ470667 BJ470667 K. Sato unpublished cDNA li... 33 2.5
gb|BQ460311.1|BQ460311 HA06K09r HA Hordeum vulgare subsp. v... 33 2.5
gb|BQ664221.1|BQ664221 HV02G10u HV Hordeum vulgare subsp. v... 33 2.5
gb|BJ460680.1|BJ460680 BJ460680 K. Sato unpublished cDNA li... 27 2.6
gb|BG415934.1|BG415934 HVSMEk0009B16f Hordeum vulgare testa... 26 3.0
gb|BJ456482.1|BJ456482 BJ456482 K. Sato unpublished cDNA li... 26 3.0
gb|BQ767774.1|BQ767774 EBro08_SQ009_F21 _R root, 3 week, dr... 27 3.0
gb|CV055894.1|CV055894 BNEL124f2 Barley EST endosperm libra... 26 3.0
gb|BU970366.1|BU970366 HB14G08r BC Hordeum vulgare subsp. v... 26 3.0
gb|BJ450247.1|BJ450247 BJ450247 K. Sato unpublished cDNA li... 26 3.0
gb|BJ457671.1|BJ457671 BJ457671 K. Sato unpublished cDNA li... 26 3.0
gb|AV921943.1|AV921943 AV921943 K. Sato unpublished cDNA li... 26 3.0
gb|AV917983.1|AV917983 AV917983 K. Sato unpublished cDNA li... 26 3.1
gb|BG418189.1|BG418189 HVSMEk0021N02f Hordeum vulgare testa... 26 3.1
gb|BU989766.1|BU989766 HF22K07r HF Hordeum vulgare subsp. v... 26 3.1
gb|BU990139.1|BU990139 HF24D07r HF Hordeum vulgare subsp. v... 26 3.1
gb|AV918394.1|AV918394 AV918394 K. Sato unpublished cDNA li... 26 3.1
gb|BU973882.1|BU973882 HB26E03r BC Hordeum vulgare subsp. v... 26 3.1
gb|BQ768170.1|BQ768170 EBro08_SQ010_K19_R root, 3 week, dro... 26 3.1
gb|BU966837.1|BU966837 HB02I04r BC Hordeum vulgare subsp. v... 26 3.1
gb|BI779124.1|BI779124 EBro01_SQ003_B07_R root, 3 week, hyd... 33 3.5
gb|AJ434398.1|AJ434398 AJ434398 S00002 Hordeum vulgare subs... 33 3.5
gb|BQ763477.1|BQ763477 EBro02_SQ008_C13_R root, 3 week, hyd... 33 3.5
gb|BU978999.1|BU978999 HA14N24r HA Hordeum vulgare subsp. v... 33 3.5
gb|AL500176.1|AL500176 AL500176 Hordeum vulgare Barke etiol... 27 3.5
gb|BU999943.1|BU999943 HS17A16u HS Hordeum vulgare subsp. v... 27 3.9
gb|BE195467.2|BE195467 HVSMEh0089M03f Hordeum vulgare 5-45 ... 25 4.0
gb|AL507003.1|AL507003 AL507003 Hordeum vulgare Barke devel... 27 4.1
gb|BF255455.2|BF255455 HVSMEf0006O12f Hordeum vulgare seedl... 27 4.1
gb|AV920587.1|AV920587 AV920587 K. Sato unpublished cDNA li... 27 4.1
gb|AV915488.1|AV915488 AV915488 K. Sato unpublished cDNA li... 27 4.1
gb|BQ458534.1|BQ458534 HA04P01r HA Hordeum vulgare subsp. v... 27 4.1
gb|CB884166.1|CB884166 HF17L03r HF Hordeum vulgare subsp. v... 25 4.1
gb|AV913347.1|AV913347 AV913347 K. Sato unpublished cDNA li... 27 4.2
gb|BI779588.2|BI779588 EBro01_SQ004_I03_R root, 3 week, hyd... 27 4.2
gb|BM370751.2|BM370751 EBro04_SQ002_B15_R root, 3 week, sal... 27 4.4
gb|BI778440.2|BI778440 EBro07_SQ003_F01_R root, 3 week, red... 27 4.4
gb|BQ763893.1|BQ763893 EBro03_SQ005_N18_R root, 3 week, wat... 27 4.5
gb|BM371175.2|BM371175 EBro04_SQ003_L11_R root, 3 week, sal... 27 4.5
gb|AL500990.1|AL500990 AL500990 Hordeum vulgare Barke roots... 32 4.7
gb|AL500992.1|AL500992 AL500992 Hordeum vulgare Barke roots... 32 4.7
gb|AL503571.1|AL503571 AL503571 Hordeum vulgare Barke roots... 32 4.7
gb|BE194998.2|BE194998 HVSMEh0088A10f Hordeum vulgare 5-45 ... 32 4.7
gb|BG418863.1|BG418863 HVSMEk0024N07f Hordeum vulgare testa... 32 4.7
gb|BF626903.3|BF626903 HVSMEb0001K11f Hordeum vulgare seedl... 32 4.7
gb|BF064963.3|BF064963 HV_CEb0022D03f Hordeum vulgare seedl... 32 4.7
gb|AV917280.1|AV917280 AV917280 K. Sato unpublished cDNA li... 32 4.7
gb|AV932172.1|AV932172 AV932172 K. Sato unpublished cDNA li... 32 4.7
gb|BJ469356.1|BJ469356 BJ469356 K. Sato unpublished cDNA li... 32 4.7
gb|BJ472753.1|BJ472753 BJ472753 K. Sato unpublished cDNA li... 32 4.7
gb|BQ459120.1|BQ459120 HA02E07r HA Hordeum vulgare subsp. v... 32 4.7
gb|BQ471063.1|BQ471063 HX04N17r HX Hordeum vulgare subsp. v... 32 4.7
gb|BQ656762.1|BQ656762 HA02E07u HA Hordeum vulgare subsp. v... 32 4.7
gb|BQ657492.1|BQ657492 HA08C11u HA Hordeum vulgare subsp. v... 32 4.7
gb|BQ657576.1|BQ657576 HA07N03u HA Hordeum vulgare subsp. v... 32 4.7
gb|BQ765131.1|BQ765131 EBca01_SQ005_K20_R carpel, pre-anthe... 32 4.7
gb|BU976128.1|BU976128 HA03D01u HA Hordeum vulgare subsp. v... 32 4.7
gb|BU976360.1|BU976360 HA03J09u HA Hordeum vulgare subsp. v... 32 4.7
gb|BU976432.1|BU976432 HA03L05r HA Hordeum vulgare subsp. v... 32 4.7
gb|BU982752.1|BU982752 HA27I01r HA Hordeum vulgare subsp. v... 32 4.7
gb|CA015807.1|CA015807 HV11P13u HV Hordeum vulgare subsp. v... 32 4.7
gb|CA019431.1|CA019431 HV11P13r HV Hordeum vulgare subsp. v... 32 4.7
gb|CA020832.1|CA020832 HZ37P12r HZ Hordeum vulgare subsp. v... 32 4.7
gb|CA022087.1|CA022087 HZ42C03r HZ Hordeum vulgare subsp. v... 32 4.7
gb|CA022534.1|CA022534 HZ43I10r HZ Hordeum vulgare subsp. v... 32 4.7
gb|CA022741.1|CA022741 HZ44D16r HZ Hordeum vulgare subsp. v... 32 4.7
gb|CA024330.1|CA024330 HZ49A05r HZ Hordeum vulgare subsp. v... 32 4.7
gb|CA024489.1|CA024489 HZ49H06r HZ Hordeum vulgare subsp. v... 32 4.7
gb|CA028257.1|CA028257 HZ61H06r HZ Hordeum vulgare subsp. v... 32 4.7
gb|CA032378.1|CA032378 HX12N13r HX Hordeum vulgare subsp. v... 32 4.7
gb|CB876117.1|CB876117 HX10F10w HX Hordeum vulgare subsp. v... 32 4.7
gb|BI955034.1|BI955034 HVSMEm0020O21f Hordeum vulgare green... 27 4.8
gb|BJ453131.1|BJ453131 BJ453131 K. Sato unpublished cDNA li... 26 4.8
gb|BM816025.1|BM816025 HC02H11_T3.ab1 HC Hordeum vulgare su... 27 5.0
gb|AL508192.1|AL508192 AL508192 Hordeum vulgare Barke devel... 32 5.1
gb|BF631311.2|BF631311 HVSMEb0015J07f Hordeum vulgare seedl... 32 5.1
gb|BQ762969.1|BQ762969 EBro02_SQ006_P17_R root, 3 week, hyd... 32 5.1
gb|BU968801.1|BU968801 HB08K03r BC Hordeum vulgare subsp. v... 32 5.1
gb|CA021929.1|CA021929 HZ41J06r HZ Hordeum vulgare subsp. v... 32 5.1
gb|AY943294.1| Hordeum vulgare subsp. vulgare clone BAC 673... 31 5.3
gb|BE196341.2|BE196341 HVSMEh0092A15f Hordeum vulgare 5-45 ... 25 5.3
gb|BE196525.3|BE196525 HVSMEh0092I17f Hordeum vulgare 5-45 ... 25 5.4
gb|BE454348.1|BE454348 HVSMEh0093M10f Hordeum vulgare 5-45 ... 25 5.4
gb|BE196262.2|BE196262 HVSMEh0091M24f Hordeum vulgare 5-45 ... 25 5.4
gb|BE195553.2|BE195553 HVSMEh0089G12f Hordeum vulgare 5-45 ... 25 5.4
gb|BE195994.2|BE195994 HVSMEh0091B03f Hordeum vulgare 5-45 ... 25 5.4
gb|BE454737.2|BE454737 HVSMEh0095K06f Hordeum vulgare 5-45 ... 25 5.4
gb|BG367898.2|BG367898 HVSMEi0014H10f Hordeum vulgare 20 DA... 25 5.4
gb|CA022964.1|CA022964 HZ44N18r HZ Hordeum vulgare subsp. v... 27 5.4
gb|BE195110.2|BE195110 HVSMEh0088F05f Hordeum vulgare 5-45 ... 25 5.4
gb|BE195429.3|BE195429 HVSMEh0089J20f Hordeum vulgare 5-45 ... 25 5.4
gb|BE602747.2|BE602747 HVSMEh0101I03f Hordeum vulgare 5-45 ... 25 5.5
gb|BE455072.2|BE455072 HVSMEh0096B10f Hordeum vulgare 5-45 ... 25 5.5
gb|BM097315.2|BM097315 EBro01_SQ004_M02_R root, 3 week, hyd... 27 5.5
gb|BE454781.3|BE454781 HVSMEh0095A21f Hordeum vulgare 5-45 ... 25 5.5
gb|AL506403.1|AL506403 AL506403 Hordeum vulgare Barke devel... 26 5.5
gb|BE602113.2|BE602113 HVSMEh0102I13f Hordeum vulgare 5-45 ... 25 5.5
gb|BE194831.2|BE194831 HVSMEh0087C04f Hordeum vulgare 5-45 ... 25 5.5
gb|BE194833.2|BE194833 HVSMEh0087C08f Hordeum vulgare 5-45 ... 25 5.5
gb|BE194149.3|BE194149 HVSMEh0084E16f Hordeum vulgare 5-45 ... 25 5.5
gb|CV058085.1|CV058085 BNEL34b6 Barley EST endosperm librar... 26 5.5
gb|CV064337.1|CV064337 BNEL9G4 Barley EST endosperm library... 26 5.5
gb|BU985626.1|BU985626 HF08C10r HF Hordeum vulgare subsp. v... 27 5.6
gb|BI951223.1|BI951223 HVSMEl0025B19f Hordeum vulgare spike... 25 5.6
gb|CB884154.1|CB884154 HF06E04r HF Hordeum vulgare subsp. v... 25 5.6
gb|BU990606.1|BU990606 HF25I16r HF Hordeum vulgare subsp. v... 25 5.6
gb|CV053546.1|CV053546 BNEL100e2 Barley EST endosperm libra... 26 5.6
gb|BU971853.1|BU971853 HB19N21r BC Hordeum vulgare subsp. v... 25 5.6
gb|BE602219.3|BE602219 HVSMEh0098B18f Hordeum vulgare 5-45 ... 25 5.6
gb|BQ472849.1|BQ472849 HB01E22r BC Hordeum vulgare subsp. v... 25 5.6
gb|CB859460.1|CB859460 HI10I06w HI Hordeum vulgare subsp. v... 26 5.6
gb|BG367755.2|BG367755 HVSMEi0013H20f Hordeum vulgare 20 DA... 25 5.6
gb|BG368163.1|BG368163 HVSMEi0016B09f Hordeum vulgare 20 DA... 25 5.6
gb|BU969002.1|BU969002 HB10D18r BC Hordeum vulgare subsp. v... 25 5.6
gb|BE602853.2|BE602853 HVSMEh0100D15f Hordeum vulgare 5-45 ... 25 5.6
gb|CA026297.1|CA026297 HZ55I03r HZ Hordeum vulgare subsp. v... 26 5.6
gb|BG366513.2|BG366513 HVSMEi0007F01f Hordeum vulgare 20 DA... 25 5.6
gb|BU973702.1|BU973702 HB25L02r BC Hordeum vulgare subsp. v... 25 5.6
gb|BU974618.1|BU974618 HB28I15r BC Hordeum vulgare subsp. v... 25 5.6
gb|BU975264.1|BU975264 HB30J16r BC Hordeum vulgare subsp. v... 25 5.6
gb|BE455135.3|BE455135 HVSMEh0096F09f Hordeum vulgare 5-45 ... 25 6.0
gb|BF622926.2|BF622926 HVSMEa0012C08f Hordeum vulgare seedl... 32 6.5
gb|BF629014.2|BF629014 HVSMEb0009I18f Hordeum vulgare seedl... 32 6.5
gb|BI950950.1|BI950950 HVSMEl0023M12f Hordeum vulgare spike... 32 6.5
gb|AW982609.3|AW982609 HVSMEg0003L19f Hordeum vulgare pre-a... 32 6.5
gb|BQ458861.1|BQ458861 HA02P22r HA Hordeum vulgare subsp. v... 32 6.5
gb|BQ462575.1|BQ462575 HI01F10T HI Hordeum vulgare subsp. v... 32 6.5
gb|BQ466164.1|BQ466164 HT01M04T HT Hordeum vulgare subsp. v... 32 6.5
gb|BQ656579.1|BQ656579 HA02P22u HA Hordeum vulgare subsp. v... 32 6.5
gb|BI776316.2|BI776316 EBem04_SQ001_J03_R embryo, 12 DPA, n... 32 6.5
gb|BM097537.2|BM097537 EBem04_SQ001_O12_R embryo, 12 DPA, n... 32 6.5
gb|BM377863.2|BM377863 EBem04_SQ004_G15_R embryo, 12 DPA, n... 32 6.5
gb|BM376783.2|BM376783 EBem05_SQ003_D15_R embryo, 14 DPA, n... 32 6.5
gb|BM099252.2|BM099252 EBes01_SQ002_L02_R embryo sac, 4-6 D... 32 6.5
gb|BI776611.2|BI776611 EBpi07_SQ001_C06_R pistil, 12 DPA, n... 32 6.5
gb|BI778047.2|BI778047 EBro07_SQ002_B06_R root, 3 week, red... 32 6.5
gb|BI778338.2|BI778338 EBro07_SQ003_A03_R root, 3 week, red... 32 6.5
gb|BU976127.1|BU976127 HA03D01r HA Hordeum vulgare subsp. v... 32 6.5
gb|BU976359.1|BU976359 HA03J09r HA Hordeum vulgare subsp. v... 32 6.5
gb|BU978828.1|BU978828 HA14G08r HA Hordeum vulgare subsp. v... 32 6.5
gb|BU980909.1|BU980909 HA22B01r HA Hordeum vulgare subsp. v... 32 6.5
gb|BU989613.1|BU989613 HF22D12r HF Hordeum vulgare subsp. v... 32 6.5
gb|BU989750.1|BU989750 HF22J15r HF Hordeum vulgare subsp. v... 32 6.5
gb|CA015269.1|CA015269 HT13M19r HT Hordeum vulgare subsp. v... 32 6.5
gb|CA030783.1|CA030783 HX08B22r HX Hordeum vulgare subsp. v... 32 6.5
gb|CB875378.1|CB875378 HX08B22w HX Hordeum vulgare subsp. v... 32 6.5
gb|CK124339.1|CK124339 BES1824108g17 BES1824 Hordeum vulgar... 32 6.5
gb|BI947244.1|BI947244 HVSMEl0004K06f Hordeum vulgare spike... 27 6.8
gb|BI957298.1|BI957298 HVSMEn0008L15f Hordeum vulgare rachi... 32 7.0
gb|BE603195.2|BE603195 HVSMEh0102H13f Hordeum vulgare 5-45 ... 25 7.3
gb|AY946210.1| Hordeum vulgare subsp. vulgare 3' flanking s... 29 7.7
gb|BI946969.1|BI946969 HVSMEl0003A13f Hordeum vulgare spike... 29 8.0
gb|BF625292.3|BF625292 HVSMEa0008E11f Hordeum vulgare seedl... 31 9.0
gb|BF254043.1|BF254043 HVSMEf0002N14f Hordeum vulgare seedl... 31 9.0
gb|BF626929.1|BF626929 HVSMEb0001L16f Hordeum vulgare seedl... 31 9.0
gb|BI946721.1|BI946721 HVSMEl0002A09f Hordeum vulgare spike... 31 9.0
gb|BE559100.1|BE559100 HV_CEb0022N12f Hordeum vulgare seedl... 31 9.0
gb|BE559132.2|BE559132 HV_CEb0023A11f Hordeum vulgare seedl... 31 9.0
gb|AJ435301.1|AJ435301 AJ435301 S00002 Hordeum vulgare subs... 31 9.0
gb|CA005022.1|CA005022 HU12L19u HU Hordeum vulgare subsp. v... 31 9.0
gb|AY970702.1| Hordeum vulgare subsp. vulgare cultivar Opti... 31 9.0
gb|AY970704.1| Hordeum vulgare subsp. vulgare cultivar Triu... 31 9.0
gb|BJ472137.1|BJ472137 BJ472137 K. Sato unpublished cDNA li... 25 9.4
gb|CA020461.1|CA020461 HZ36G04r HZ Hordeum vulgare subsp. v... 25 9.5
gb|BF616500.2|BF616500 HVSMEc0010C21f Hordeum vulgare seedl... 31 9.7
gb|BI953763.1|BI953763 HVSMEm0014E13f Hordeum vulgare green... 31 9.7
gb|BQ472435.1|BQ472435 HB09I21T BC Hordeum vulgare subsp. v... 31 9.7
gb|BU969656.1|BU969656 HB12D01r BC Hordeum vulgare subsp. v... 31 9.7
gb|BU972530.1|BU972530 HB21O16r BC Hordeum vulgare subsp. v... 31 9.7
gb|CB874836.1|CB874836 HX06H10w HX Hordeum vulgare subsp. v... 31 9.7
gb|BJ470126.1|BJ470126 BJ470126 K. Sato unpublished cDNA li... 25 9.7
gb|BM441928.2|BM441928 EBed07_SQ001_P04_R endosperm, 28 DPA... 24 9.9
gb|BQ755428.1|BQ755428 EBed07_SQ002_H15_R endosperm, 28 DPA... 24 9.9
gb|BI780052.2|BI780052 EBma08_SQ001_E10_R maternal, 28 DPA,... 24 9.9
gb|BQ755645.1|BQ755645 EBed07_SQ003_O01_R endosperm, 28 DPA... 24 10.0
>gb|BF621515.2|BF621515 HVSMEa0011D23f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0011D23f, mRNA sequence
Length = 806
Score = 163 bits (352), Expect(2) = 2e-076
Identities = 58/89 (65%), Positives = 72/89 (80%)
Frame = +1 / +3
Query: 460 CGQAFVVEQDSYVFSALDLNNTNDTKPQYRHVVLEWSVNGSSCEEAKLSGSYACAENAYC 639
C +AF+ EQ+ YVFS DLNNTN T P YR VVLEWS++G +CEEA+ S SYAC EN+YC
Sbjct: 291 CSEAFIAEQNFYVFSTADLNNTNRTSPGYRPVVLEWSMDGGNCEEARHSASYACKENSYC 470
Query: 640 YNSSNGIGYRCNCSSGFEGNPYLQGPNGC 726
YN+S+G GY CNC+ GF+GNPYL+ P+GC
Sbjct: 471 YNASSGFGYHCNCTKGFQGNPYLRXPSGC 557
Score = 143 bits (308), Expect(2) = 2e-076
Identities = 56/74 (75%), Positives = 66/74 (89%)
Frame = +1 / +3
Query: 199 GTVFTFSDTRNKFTALGCNVVAMLLNGSTGYSGGCASFCSSGNNIIDGSCSGVACCQAPV 378
G FSDTRNKFTA+GC++VAMLLNGS+ YSGGCAS CS+ N+I++GSCSGVACCQAPV
Sbjct: 24 GDKLQFSDTRNKFTAVGCDMVAMLLNGSSDYSGGCASLCSTKNSIVNGSCSGVACCQAPV 203
Query: 379 PKGLKKLDLEFSNI 420
PKGLKKL LEF++I
Sbjct: 204 PKGLKKLSLEFTSI 245
Score = 123 bits (264), Expect(2) = 9e-055
Identities = 52/70 (74%), Positives = 59/70 (84%)
Frame = -1 / -2
Query: 422 LILLNSKSSFFSPLGTGAWQQATPEHEPSMMLFPLEQKEAQPPLYPVLPFKSMATTLQPR 243
++L+NSK SFF+PLGTGAWQQATPE EP MLF +EQ+EAQPPL +LPF SMAT QP
Sbjct: 247 VMLVNSKDSFFNPLGTGAWQQATPEQEPLTMLFFVEQREAQPPL*SLLPFNSMATISQPT 68
Query: 242 AVNLFLVSEN 213
AVNLFLVSEN
Sbjct: 67 AVNLFLVSEN 38
Score = 110 bits (235), Expect(2) = 9e-055
Identities = 54/89 (60%), Positives = 56/89 (62%)
Frame = -1 / -2
Query: 725 HPFGPCRYGFPSNPLEQLQR*PIPFDEL*Q*AFSAQAYDPDSFASSQLLPFTDHSSTTCR 546
HP G RYGFP NPL QLQ P P D L*Q* FS QAYD + ASSQL P DHS TT R
Sbjct: 556 HPLGXRRYGFP*NPLVQLQ*YPNPLDAL*Q*EFSLQAYDAECLASSQLPPSMDHSRTTGR 377
Query: 545 Y*GFVSFVLFRSRAENTYESCSTTKA*PH 459
Y G V FVLFRS E T + CS A H
Sbjct: 376 YPGLVLFVLFRSAVEKT*KFCSAMNASEH 290
Score = 97.8 bits (208), Expect(2) = 6e-032
Identities = 46/74 (62%), Positives = 53/74 (71%)
Frame = -3 / -1
Query: 411 EL*VQLL*PFGNRRLAASHPRA*AVDDVISTRAKGSTATAIPRAAIQKHGHHVTTQSCEL 232
EL* QLL*P G R LAASH RA +DD I RAK STATAI A IQ+HGHH+TT SCEL
Sbjct: 236 EL*RQLL*PLGYRCLAASHTRARTIDDAIFCRAKRSTATAIITATIQQHGHHITTHSCEL 57
Query: 231 VPCV*ECEDGPLKV 190
V C+ E + P ++
Sbjct: 56 VSCIGELKLVPSRL 15
Score = 97.8 bits (208), Expect(2) = 4e-037
Identities = 42/67 (62%), Positives = 46/67 (68%)
Frame = -2 / -3
Query: 412 *TLSPASLALWEPALGSKPPQSMSRR*CYFH*SKRKHSHRYTPCCHSKAWPPRYNPEL*T 233
*TL ASL W P LGSKP QS + CYF *SK KHSHRY C HS AWPP +NP+L*T
Sbjct: 237 *TLKTASLTPWVPVLGSKPHQSKNH*RCYFL*SKEKHSHRYNHCYHSTAWPPYHNPQL*T 58
Query: 232 CSLCLRM 212
C L R+
Sbjct: 57 CFLYRRI 37
Score = 84.1 bits (178), Expect(3) = 4e-027
Identities = 41/76 (53%), Positives = 46/76 (60%)
Frame = +2 / +1
Query: 185 ALTLRGPXXXXXXXXXXXXLWVVTWWPCF*MAARGIAVAVLPFALVEITSSTAHALGWLA 364
+ +L G LWVV WWPC *M A IAVAVL FAL +I SS AL WLA
Sbjct: 10 SFSLEGTSFNSPIQETSSQLWVVIWWPCC*MVAVIIAVAVLLFALQKIASSMVLALVWLA 189
Query: 365 AKRRFPKG*RSWT*SS 412
AK R+P+G*RS *SS
Sbjct: 190 AKHRYPRG*RSCL*SS 237
Score = 76.8 bits (162), Expect(2) = 4e-037
Identities = 37/91 (40%), Positives = 49/91 (53%)
Frame = -2 / -3
Query: 733 YLCIHLALAGMGSPRIHWSNCSGNRFRLMSCSSRHSLRRRMIRTVSPLHSCCRSQTTRAQ 554
YL IH A A GSP I W NCS + M SS++ + M+++V HSC TTR Q
Sbjct: 564 YLGIH*AXADTGSPEIPWYNCSDIQIHWMRYSSKNFPCKHMMQSVLLPHSCHHPWTTREQ 385
Query: 553 HVGIEVLCRLCCSDQELKTHMNPAPRRRPDH 461
G + LCCS Q+ + H + APR P +
Sbjct: 384 QAGTQGWSYLCCSGQQ*RKHRSSAPR*MPQN 292
Score = 59.5 bits (124), Expect(2) = 6e-032
Identities = 36/95 (37%), Positives = 47/95 (49%)
Frame = -3 / -1
Query: 726 ASIWPLQVWVPLESTGXXXXXXXXXXXXXXVGILCAGV*SGQFRLFTAAAVHRPLEHNMS 547
AS P Q+ VPL+S G V I A +* T A +H PLE+N
Sbjct: 557 ASTRPPQIRVPLKSLGTIAVISKSTGCVIAVRIFLASI*CRVSCFLTVATIHGPLENNRP 378
Query: 546 VLRFCVVCVVQIKS*KHI*ILLHDEGLTTWPVIVI 442
V R +CVVQ+ S ++I +LL DE L T IV+
Sbjct: 377 VPRAGPICVVQVSSRENIEVLLRDECLRTRWSIVV 273
Score = 56.7 bits (118), Expect(3) = 9e-020
Identities = 23/32 (71%), Positives = 26/32 (81%)
Frame = +3 / +2
Query: 213 ILRHKEQVHSSGL*RGGHAFEWQHGV*RWLCF 308
ILR+K+QVHS GL* GGHA EW +*RWLCF
Sbjct: 38 ILRYKKQVHSCGL*YGGHAVEW*Q*L*RWLCF 133
Score = 49.9 bits (103), Expect(3) = 9e-020
Identities = 23/62 (37%), Positives = 36/62 (58%)
Frame = +2 / +1
Query: 551 MLCSSGL*TAAAVKRRNCPDHTPAQRMPTATTHQTESVTAAIAPVDSRGTHTCKGQMDAQ 730
+L SSG A V++++ H A+++ TA TH + AI P D RGT C G +DA+
Sbjct: 382 LLFSSGPWMVATVRKQDTLHHMLARKILTAITHPVDLDITAIVPRDFRGTRICGGLVDAK 561
Query: 731 IL 736
++
Sbjct: 562 VM 567
Score = 44.0 bits (90), Expect(3) = 4e-027
Identities = 20/46 (43%), Positives = 27/46 (58%)
Frame = +3 / +2
Query: 468 GLRRGAGFICVFSS*SEQHKRHKTSIPTCCARVVCERQQL*RGETV 605
G+ RGA +C * EQHK + +P CC+RVV QL* +T+
Sbjct: 299 GIHRGAELLCFLYC*PEQHK*DQPWVPACCSRVVHGWWQL*GSKTL 436
Score = 31.7 bits (63), Expect(3) = 9e-020
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = +3 / +2
Query: 351 WGGLLPSAGSQRAKEAGLRV 410
W GLLPS G+Q KEA RV
Sbjct: 176 WCGLLPSTGTQGVKEAVFRV 235
Score = 30.7 bits (61), Expect(3) = 4e-027
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = +3 / +2
Query: 663 LPLQLLQWIRGEPIPARAKWMHR 731
+ LQL Q I GEP+ A A WM R
Sbjct: 494 ISLQLYQGISGEPVSAXA*WMPR 562
>gb|CA007660.1|CA007660 HU08K05r HU Hordeum vulgare subsp. vulgare cDNA clone HU08K05
5-PRIME, mRNA sequence
Length = 605
Score = 61.3 bits (128), Expect(5) = 1e-031
Identities = 21/31 (67%), Positives = 25/31 (80%)
Frame = +1 / +3
Query: 622 AENAYCYNSSNGIGYRCNCSSGFEGNPYLQG 714
+EN C +SSNG GYRCNCS G++GNPYL G
Sbjct: 315 SENTMCVDSSNGPGYRCNCSIGYQGNPYLSG 407
Score = 60.4 bits (126), Expect(5) = 1e-031
Identities = 22/60 (36%), Positives = 38/60 (63%)
Frame = +1 / +3
Query: 328 NIIDGSCSGVACCQAPVPKGLKKLDLEFSNINITNSGIDYDYWPCGQAFVVEQDSYVFSA 507
++ +GSC GV CCQ VPKGL ++ F +++ N + + PC A +VE ++++FS+
Sbjct: 9 DLTNGSCVGVGCCQNVVPKGLMGYNVFFYDVDYVNKSNSWHFNPCSYAGLVETEAFIFSS 188
Score = 34.8 bits (70), Expect(3) = 1e-006
Identities = 19/39 (48%), Positives = 21/39 (53%)
Frame = -1 / -2
Query: 713 PCRYGFPSNPLEQLQR*PIPFDEL*Q*AFSAQAYDPDSF 597
P R GFP P+EQLQR P P DE FS + D F
Sbjct: 406 PER*GFPWYPMEQLQRYPGPLDESTHMVFSLRHA*EDMF 290
Score = 34.4 bits (69), Expect(3) = 1e-006
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = -1 / -2
Query: 386 PLGTGAWQQATPEHEP 339
PLGT WQQ TP HEP
Sbjct: 67 PLGTTFWQQPTPTHEP 20
Score = 33.5 bits (67), Expect(5) = 1e-031
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +1 / +3
Query: 757 PCTNRCSNTIGGFQCTCPAG 816
P + C N+ GG+QC+CP G
Sbjct: 453 PDSASCQNSAGGYQCSCPFG 512
Score = 28.5 bits (56), Expect(5) = 1e-031
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +1 / +3
Query: 526 NDTKPQYRHVVLEWSVNGSSCEEAK 600
NDT + VVL+W + ++CE A+
Sbjct: 213 NDTYKGQQPVVLDWVIGNATCEVAR 287
Score = 25.3 bits (49), Expect(5) = 1e-031
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +1 / +3
Query: 721 GCTDINEC 744
GCTD+NEC
Sbjct: 408 GCTDVNEC 431
Score = 23.0 bits (44), Expect(3) = 1e-006
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = -1 / -2
Query: 809 GHVHWKPPIVF 777
GH HW PP F
Sbjct: 505 GHEHW*PPAEF 473
>gb|BM443591.2|BM443591 EBro02_SQ005_M19_R root, 3 week, hydroponic grown, low nitrogen, cv
Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone
EBro02_SQ005_M19 5', mRNA sequence
Length = 577
Score = 46.7 bits (96), Expect(4) = 3e-015
Identities = 14/29 (48%), Positives = 22/29 (75%)
Frame = +1 / +2
Query: 622 AENAYCYNSSNGIGYRCNCSSGFEGNPYL 708
+ ++ C NS+N +GY C+C G++GNPYL
Sbjct: 395 SSSSKCVNSTNDLGYTCSCIPGYDGNPYL 481
Score = 41.2 bits (84), Expect(4) = 3e-015
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +1 / +2
Query: 283 TGYSGGCASFCSSGNNIIDGSCSGVACCQAPVPKGLKKLDLEF 411
TGY + C +++ GSCSG+ C Q +PK ++ +F
Sbjct: 44 TGYQAYGVASCRGLTDLVGGSCSGIGCSQTTIPKKMRNYYTDF 172
Score = 25.7 bits (50), Expect(4) = 3e-015
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +1 / +2
Query: 757 PCTNRCSNTIGGFQCTC 807
P C NT GG+ C+C
Sbjct: 527 PSDGFCHNTDGGYWCSC 577
Score = 25.7 bits (50), Expect(4) = 3e-015
Identities = 7/9 (77%), Positives = 9/9 (100%)
Frame = +1 / +2
Query: 718 NGCTDINEC 744
+GCTD+NEC
Sbjct: 485 DGCTDVNEC 511
>gb|AL505172.1|AL505172 AL505172 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW07J23V 5', mRNA sequence
Length = 663
Score = 46.7 bits (96), Expect(2) = 8e-009
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +1 / +3
Query: 289 YSGGCASFCSSGNNIIDGSCSGVACCQAPVPKGLKKLDLEFSN 417
Y GC ++ + + DG+C GV CC +P GL + F+N
Sbjct: 222 YYTGCIAYADNSGSAKDGACDGVGCCHVDIPAGLTDNKMRFTN 350
Score = 33.0 bits (66), Expect(2) = 8e-009
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +1 / +3
Query: 433 SGIDYDYWPCGQAFVVEQDSYVFSALDL 516
S + ++ PC AF+VE+ +Y F A DL
Sbjct: 363 SHANQEFCPCDYAFIVEKGNYTFRAADL 446
Score = 31.2 bits (62), Expect(3) = 0.012
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = -1 / -3
Query: 389 SPLGTGAWQQATPEHEPSMML 327
SP G WQQ TP PS+ L
Sbjct: 322 SPAGMSTWQQPTPSQAPSLAL 260
Score = 23.9 bits (46), Expect(3) = 0.012
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = -2 / -1
Query: 133 CSQDHQATRCQESQACC 83
CS+ +A RC Q CC
Sbjct: 219 CSRSGRAARCWCRQKCC 169
Score = 23.0 bits (44), Expect(3) = 0.012
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -1 / -3
Query: 515 RSRAENTYESCSTTKA*PHGQ 453
RS A N ST KA* HGQ
Sbjct: 445 RSAARNV*FPFSTMKA*SHGQ 383
>gb|BE195366.3|BE195366 HVSMEh0089A15f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0089A15f, mRNA sequence
Length = 848
Score = 45.3 bits (93), Expect = 5e-004
Identities = 21/33 (63%), Positives = 23/33 (69%)
Frame = -1 / -1
Query: 980 YLCLVFASFLFLPSQ*VQKPRMRRSTSRANPAT 882
YLCL FASFL L Q*VQ RS+SRA+P T
Sbjct: 107 YLCLFFASFLLLTRQ*VQNLTRSRSSSRASPPT 9
Score = 36.2 bits (73), Expect = 0.30
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = +1 / +1
Query: 925 FWTHWLGKKRKLAKTRQR 978
FWTH L K+RKLAK RQR
Sbjct: 52 FWTHCLVKRRKLAKKRQR 105
Score = 33.0 bits (66), Expect = 2.5
Identities = 14/29 (48%), Positives = 22/29 (75%)
Frame = +3 / +3
Query: 894 SSASASPHPWLLDSLAW*EEETCKDKAKV 980
SSA+AS +LDSL+ *EE+ C++K ++
Sbjct: 21 SSATASTSCQILDSLSC*EEKACEEKTEI 107
>gb|BE602116.3|BE602116 HVSMEh0102I16f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0102I16f, mRNA sequence
Length = 725
Score = 35.8 bits (72), Expect(2) = 0.002
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +1 / +3
Query: 340 GSCSGVACCQAPVPKGLK 393
GSCSG+ CCQ + KGL+
Sbjct: 552 GSCSGIGCCQTAIAKGLQ 605
Score = 25.7 bits (50), Expect(2) = 0.002
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +1 / +3
Query: 229 NKFTALGCNVVAMLLN 276
NKFT +GC +A +L+
Sbjct: 414 NKFTVIGCQALAYILS 461
>gb|CA030543.1|CA030543 HX07F24r HX Hordeum vulgare subsp. vulgare cDNA clone HX07F24
5-PRIME, mRNA sequence
Length = 547
Score = 39.0 bits (79), Expect = 0.045
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +1 / -2
Query: 619 CAENAYCYNSSNGIGYRCNCSSGFEGNPY 705
C + C ++ G G+ C C +G++GNPY
Sbjct: 339 CNNMSRCIDAPTGAGHLCKCHAGYDGNPY 253
>gb|BE214460.3|BE214460 HV_CEb0003I09f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0003I09f, mRNA sequence
Length = 702
Score = 31.7 bits (63), Expect(2) = 0.13
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +3 / +3
Query: 828 RPQGRKWLQWSKHTSDCNSCRISSASASPHPW 923
RP+ + +WS T+ +CRI S+ +S W
Sbjct: 528 RPESTRTRRWSSRTTASTACRIPSSCSSSTRW 623
Score = 25.7 bits (50), Expect(2) = 0.13
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +1 / +2
Query: 1 GVAGKSPSLSRGFKVVCGHSGPLLSI 78
G G++ RGF V G GPLL +
Sbjct: 332 GCRGRADRRHRGFAPVGGFGGPLLPL 409
>gb|BG369649.1|BG369649 HVSMEi0025F09f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0025F09f, mRNA sequence
Length = 718
Score = 37.1 bits (75), Expect = 0.14
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = +3 / -2
Query: 786 RWFPVHVPSRDERRRPQGRK 845
RWFP +VP+R E+R QGR+
Sbjct: 474 RWFPANVPARQEQREQQGRR 415
>gb|BQ464229.1|BQ464229 HF01L05T HF Hordeum vulgare subsp. vulgare cDNA clone HF01L05
5-PRIME, mRNA sequence
Length = 586
Score = 37.1 bits (75), Expect = 0.14
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = -1 / +1
Query: 125 RPSSNEMSRIPSMLFPMDSNGPLCPHTTLNPRDREGLLP 9
RP+S+ SR P+ S PLCP T+ +P EG P
Sbjct: 325 RPTSSASSRTPTSAPSTPSASPLCPRTSSSPAASEGSAP 441
>gb|AL505237.1|AL505237 AL505237 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW07N07V 5', mRNA sequence
Length = 352
Score = 32.1 bits (64), Expect(2) = 0.16
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +1 / +2
Query: 772 CSNTIGGFQCTCPAGMSGDGLKEGSG 849
C NT GG+ C C G G++ G G
Sbjct: 161 CRNTWGGYHCGCGGGGRQPGVRHGRG 238
Score = 22.5 bits (43), Expect(2) = 0.16
Identities = 6/14 (42%), Positives = 9/14 (64%)
Frame = +1 / +2
Query: 724 CTDINECITRNPCT 765
C D++EC + CT
Sbjct: 104 CQDVDECSDKXACT 145
>gb|BI952203.1|BI952203 HVSMEm0004P22f Hordeum vulgare green seedling EST library
HVcDNA0014 (Blumeria infected) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEm0004P22f, mRNA sequence
Length = 872
Score = 35.8 bits (72), Expect = 0.41
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +1 / +3
Query: 730 DINECITRNPCTNRCSNTIGGFQCT 804
DI+EC N C C NT+G + C+
Sbjct: 96 DIDECTLPNYCNGTCQNTLGNYTCS 170
>gb|BE193175.2|BE193175 HVSMEh0080A09f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0080A09f, mRNA sequence
Length = 667
Score = 28.0 bits (55), Expect(2) = 0.44
Identities = 10/34 (29%), Positives = 12/34 (35%)
Frame = +1 / -1
Query: 577 GSSCEEAKLSGSYACAENAYCYNSSNGIGYRCNC 678
G C+ G+ C C N GY C C
Sbjct: 223 GCCCQNGGCCGNGCCDGKGCCANGCGCCGYGCGC 122
Score = 27.6 bits (54), Expect(2) = 0.44
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +1 / -3
Query: 361 CCQAPVPKGLKKL 399
CC APV KG+KKL
Sbjct: 632 CCFAPVGKGVKKL 594
>gb|BU990386.1|BU990386 HF24N24r HF Hordeum vulgare subsp. vulgare cDNA clone HF24N24
5-PRIME, mRNA sequence
Length = 448
Score = 35.3 bits (71), Expect = 0.51
Identities = 17/46 (36%), Positives = 22/46 (47%)
Frame = -1 / +3
Query: 146 ALANMLTRPSSNEMSRIPSMLFPMDSNGPLCPHTTLNPRDREGLLP 9
AL RP+S+ SR P+ S P CP T+ +P EG P
Sbjct: 309 ALQEWPPRPTSSASSRTPTSXPSTPSASPSCPRTSSSPAASEGSAP 446
>gb|BG366251.1|BG366251 HVSMEi0006G12f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0006G12f, mRNA sequence
Length = 950
Score = 24.8 bits (48), Expect(3) = 0.60
Identities = 9/21 (42%), Positives = 10/21 (47%)
Frame = +1 / -3
Query: 625 ENAYCYNSSNGIGYRCNCSSG 687
E YC S + Y C C SG
Sbjct: 252 E*TYCICSCKSVWYSCLCGSG 190
Score = 24.4 bits (47), Expect(3) = 0.60
Identities = 12/39 (30%), Positives = 14/39 (35%)
Frame = +1 / -3
Query: 742 CITRNPCTNRCSNTIGGFQCTCPAGMSGDGLKEGSGCNG 858
C R C + G C G G+G G GC G
Sbjct: 165 CCDRIGCCSPNGGCCGNGFCCQNGGCCGNGCCGGKGCCG 49
Score = 23.9 bits (46), Expect(3) = 0.60
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +3 / -1
Query: 534 KTSIPTCCARVVC 572
K PTCCAR C
Sbjct: 545 KDHCPTCCARNCC 507
>gb|BG367361.2|BG367361 HVSMEi0012A01f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0012A01f, mRNA sequence
Length = 714
Score = 24.8 bits (48), Expect(3) = 0.66
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = +1 / -3
Query: 634 YCYNSSNGIGYRCNCSSG 687
YC S + Y C C SG
Sbjct: 283 YCICSCRSVWYSCPCGSG 230
Score = 24.4 bits (47), Expect(3) = 0.66
Identities = 12/39 (30%), Positives = 14/39 (35%)
Frame = +1 / -3
Query: 742 CITRNPCTNRCSNTIGGFQCTCPAGMSGDGLKEGSGCNG 858
C R C + G C G G+G G GC G
Sbjct: 205 CCDRIGCCSPNGGCCGNGFCCQNGGCCGNGCCGGKGCCG 89
Score = 23.0 bits (44), Expect(3) = 0.66
Identities = 8/20 (40%), Positives = 9/20 (45%)
Frame = +1 / -3
Query: 322 GNNIIDGSCSGVACCQAPVP 381
G NI+ C G CC P
Sbjct: 586 GKNIVRLGCGGNGCCGWKTP 527
>gb|BQ665491.1|BQ665491 HX03N13u HX Hordeum vulgare subsp. vulgare cDNA clone HX03N13
3-PRIME, mRNA sequence
Length = 512
Score = 34.8 bits (70), Expect = 0.71
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -1 / -2
Query: 125 RPSSNEMSRIPSMLFPMDSNGPLCPHTTLNPRDREGLLP 9
RP+S+ SR P+ S P CP T+ +P EG P
Sbjct: 280 RPTSSASSRTPTFAPSTPSASPSCPRTSSSPAASEGSAP 164
>gb|BU976387.1|BU976387 HA03J23u HA Hordeum vulgare subsp. vulgare cDNA clone HA03J23
3-PRIME, mRNA sequence
Length = 491
Score = 34.8 bits (70), Expect = 0.71
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -1 / -2
Query: 125 RPSSNEMSRIPSMLFPMDSNGPLCPHTTLNPRDREGLLP 9
RP+S+ SR P+ S P CP T+ +P EG P
Sbjct: 274 RPTSSASSRTPTFAPSTPSASPSCPRTSSSPAASEGSAP 158
>gb|BU977322.1|BU977322 HA11D14u HA Hordeum vulgare subsp. vulgare cDNA clone HA11D14
3-PRIME, mRNA sequence
Length = 444
Score = 34.8 bits (70), Expect = 0.71
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -1 / -3
Query: 125 RPSSNEMSRIPSMLFPMDSNGPLCPHTTLNPRDREGLLP 9
RP+S+ SR P+ S P CP T+ +P EG P
Sbjct: 274 RPTSSASSRTPTFAPSTPSASPSCPRTSSSPAASEGSAP 158
>gb|CA030898.1|CA030898 HX08H06r HX Hordeum vulgare subsp. vulgare cDNA clone HX08H06
5-PRIME, mRNA sequence
Length = 557
Score = 34.8 bits (70), Expect = 0.71
Identities = 17/47 (36%), Positives = 22/47 (46%)
Frame = -1 / +2
Query: 149 LALANMLTRPSSNEMSRIPSMLFPMDSNGPLCPHTTLNPRDREGLLP 9
L L RP+S+ SR P+ S P CP T+ +P EG P
Sbjct: 344 LRLPGRPPRPTSSASSRTPTSAPSTPSASPSCPRTSSSPAASEGSAP 484
>gb|CB876569.1|CB876569 HX11K24w HX Hordeum vulgare subsp. vulgare cDNA clone HX11K24
3-PRIME, mRNA sequence
Length = 497
Score = 34.8 bits (70), Expect = 0.71
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -1 / -3
Query: 125 RPSSNEMSRIPSMLFPMDSNGPLCPHTTLNPRDREGLLP 9
RP+S+ SR P+ S P CP T+ +P EG P
Sbjct: 249 RPTSSASSRTPTFAPSTPSASPSCPRTSSSPAASEGSAP 133
>gb|AL500518.1|AL500518 AL500518 Hordeum vulgare Barke etiolated leaves Hordeum vulgare
subsp. vulgare cDNA clone HK06P16r 3', mRNA sequence
Length = 668
Score = 34.8 bits (70), Expect = 0.77
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +1 / -3
Query: 748 TRNPCTNRCSNTIGGFQCTCPAGMSGDGLKE 840
TRN T G C CPAG GDG+K+
Sbjct: 609 TRNKKTXSACQESGERNCKCPAGFRGDGVKK 517
>gb|BF262190.2|BF262190 HV_CEa0003J03f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0003J03f, mRNA sequence
Length = 616
Score = 34.8 bits (70), Expect = 0.77
Identities = 15/57 (26%), Positives = 24/57 (42%)
Frame = +1 / +3
Query: 259 VAMLLNGSTGYSGGCASFCSSGNNIIDGSCSGVACCQAPVPKGLKKLDLEFSNINIT 429
V + G+ G C S C+ G+C+G CC P + L+ + + N T
Sbjct: 327 VTLFEYGTGDMVGSCMSRCAGKKAPTGGACNGKGCCLIPFARNLQGFRAKLVSTNTT 497
>gb|AL501447.1|AL501447 AL501447 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW04D21u 3', mRNA sequence
Length = 503
Score = 34.4 bits (69), Expect = 0.97
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -1 / -2
Query: 125 RPSSNEMSRIPSMLFPMDSNGPLCPHTTLNPRDREGLLP 9
RP+S+ SR P+ S P CP T+ +P EG P
Sbjct: 280 RPTSSASSRTPTSAPSTPSASPSCPRTSSSPAASEGSAP 164
>gb|AL503028.1|AL503028 AL503028 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW09H21u 3', mRNA sequence
Length = 580
Score = 34.4 bits (69), Expect = 0.97
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -1 / -1
Query: 125 RPSSNEMSRIPSMLFPMDSNGPLCPHTTLNPRDREGLLP 9
RP+S+ SR P+ S P CP T+ +P EG P
Sbjct: 307 RPTSSASSRTPTSAPSTPSASPSCPRTSSSPAASEGSAP 191
>gb|AL504111.1|AL504111 AL504111 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW04D21V 5', mRNA sequence
Length = 568
Score = 34.4 bits (69), Expect = 0.97
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -1 / +1
Query: 125 RPSSNEMSRIPSMLFPMDSNGPLCPHTTLNPRDREGLLP 9
RP+S+ SR P+ S P CP T+ +P EG P
Sbjct: 289 RPTSSASSRTPTSAPSTPSASPSCPRTSSSPAASEGSAP 405
>gb|AL505775.1|AL505775 AL505775 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW09H21V 5', mRNA sequence
Length = 473
Score = 34.4 bits (69), Expect = 0.97
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -1 / +2
Query: 125 RPSSNEMSRIPSMLFPMDSNGPLCPHTTLNPRDREGLLP 9
RP+S+ SR P+ S P CP T+ +P EG P
Sbjct: 311 RPTSSASSRTPTSAPSTPSASPSCPRTSSSPAASEGSAP 427
>gb|AL507086.1|AL507086 AL507086 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY05E22T 5',
mRNA sequence
Length = 659
Score = 34.4 bits (69), Expect = 0.97
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -1 / +2
Query: 125 RPSSNEMSRIPSMLFPMDSNGPLCPHTTLNPRDREGLLP 9
RP+S+ SR P+ S P CP T+ +P EG P
Sbjct: 362 RPTSSASSRTPTSAPSTPSASPSCPRTSSSPAASEGSAP 478
>gb|AL508375.1|AL508375 AL508375 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY08J09V 5',
mRNA sequence
Length = 634
Score = 34.4 bits (69), Expect = 0.97
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -1 / +3
Query: 125 RPSSNEMSRIPSMLFPMDSNGPLCPHTTLNPRDREGLLP 9
RP+S+ SR P+ S P CP T+ +P EG P
Sbjct: 351 RPTSSASSRTPTSAPSTPSASPSCPRTSSSPAASEGSAP 467
>gb|AL510558.1|AL510558 AL510558 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY05E22u 3',
mRNA sequence
Length = 599
Score = 34.4 bits (69), Expect = 0.97
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -1 / -2
Query: 125 RPSSNEMSRIPSMLFPMDSNGPLCPHTTLNPRDREGLLP 9
RP+S+ SR P+ S P CP T+ +P EG P
Sbjct: 316 RPTSSASSRTPTSAPSTPSASPSCPRTSSSPAASEGSAP 200
>gb|BF255160.2|BF255160 HVSMEf0006B22f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0006B22f, mRNA sequence
Length = 604
Score = 34.4 bits (69), Expect = 0.97
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = +3 / +3
Query: 813 RDERRRPQGRKWLQWSKHTSDCNSCR 890
RDE RR QGR W W C CR
Sbjct: 315 RDEERRRQGRGWALWPLGPGLCRPCR 392
>gb|BF260173.2|BF260173 HVSMEf0021E20f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0021E20f, mRNA sequence
Length = 790
Score = 34.4 bits (69), Expect = 0.97
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = +3 / +2
Query: 813 RDERRRPQGRKWLQWSKHTSDCNSCR 890
RDE RR QGR W W C CR
Sbjct: 125 RDEERRRQGRGWALWPLGPGLCRPCR 202
>gb|BG343121.2|BG343121 HVSMEg0002H10f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0002H10f, mRNA sequence
Length = 628
Score = 34.4 bits (69), Expect = 0.97
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -1 / +2
Query: 125 RPSSNEMSRIPSMLFPMDSNGPLCPHTTLNPRDREGLLP 9
RP+S+ SR P+ S P CP T+ +P EG P
Sbjct: 350 RPTSSASSRTPTSAPSTPSASPSCPRTSSSPAASEGSAP 466
>gb|AV924971.1|AV924971 AV924971 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd17l01 5', mRNA sequence
Length = 577
Score = 34.4 bits (69), Expect = 0.97
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = +3 / +1
Query: 813 RDERRRPQGRKWLQWSKHTSDCNSCR 890
RDE RR QGR W W C CR
Sbjct: 430 RDEERRRQGRGWALWPLGPGLCRPCR 507
>gb|AV924972.1|AV924972 AV924972 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd17l02 5', mRNA sequence
Length = 549
Score = 34.4 bits (69), Expect = 0.97
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = +3 / +1
Query: 813 RDERRRPQGRKWLQWSKHTSDCNSCR 890
RDE RR QGR W W C CR
Sbjct: 469 RDEERRRQGRGWALWPLGPGLCRPCR 546
>gb|BQ470241.1|BQ470241 HX02D21r HX Hordeum vulgare subsp. vulgare cDNA clone HX02D21
5-PRIME, mRNA sequence
Length = 485
Score = 34.4 bits (69), Expect = 0.97
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -1 / -2
Query: 125 RPSSNEMSRIPSMLFPMDSNGPLCPHTTLNPRDREGLLP 9
RP+S+ SR P+ S P CP T+ +P EG P
Sbjct: 256 RPTSSASSRTPTSAPSTPSASPSCPRTSSSPAASEGSAP 140
>gb|BQ470496.1|BQ470496 HX03C12r HX Hordeum vulgare subsp. vulgare cDNA clone HX03C12
5-PRIME, mRNA sequence
Length = 475
Score = 34.4 bits (69), Expect = 0.97
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -1 / +3
Query: 125 RPSSNEMSRIPSMLFPMDSNGPLCPHTTLNPRDREGLLP 9
RP+S+ SR P+ S P CP T+ +P EG P
Sbjct: 354 RPTSSASSRTPTSAPSTPSASPSCPRTSSSPAASEGSAP 470
>gb|BQ470719.1|BQ470719 HX03N05r HX Hordeum vulgare subsp. vulgare cDNA clone HX03N05
5-PRIME, mRNA sequence
Length = 625
Score = 34.4 bits (69), Expect = 0.97
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -1 / +1
Query: 125 RPSSNEMSRIPSMLFPMDSNGPLCPHTTLNPRDREGLLP 9
RP+S+ SR P+ S P CP T+ +P EG P
Sbjct: 340 RPTSSASSRTPTSAPSTPSASPSCPRTSSSPAASEGSAP 456
>gb|BQ470724.1|BQ470724 HX03N13r HX Hordeum vulgare subsp. vulgare cDNA clone HX03N13
5-PRIME, mRNA sequence
Length = 490
Score = 34.4 bits (69), Expect = 0.97
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -1 / +2
Query: 125 RPSSNEMSRIPSMLFPMDSNGPLCPHTTLNPRDREGLLP 9
RP+S+ SR P+ S P CP T+ +P EG P
Sbjct: 362 RPTSSASSRTPTSAPSTPSASPSCPRTSSSPAASEGSAP 478
>gb|BQ470761.1|BQ470761 HX03P07r HX Hordeum vulgare subsp. vulgare cDNA clone HX03P07
5-PRIME, mRNA sequence
Length = 483
Score = 34.4 bits (69), Expect = 0.97
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -1 / +2
Query: 125 RPSSNEMSRIPSMLFPMDSNGPLCPHTTLNPRDREGLLP 9
RP+S+ SR P+ S P CP T+ +P EG P
Sbjct: 344 RPTSSASSRTPTSAPSTPSASPSCPRTSSSPAASEGSAP 460
>gb|BQ657878.1|BQ657878 HA06K09u HA Hordeum vulgare subsp. vulgare cDNA clone HA06K09
3-PRIME, mRNA sequence
Length = 555
Score = 34.4 bits (69), Expect = 0.97
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -1 / -3
Query: 125 RPSSNEMSRIPSMLFPMDSNGPLCPHTTLNPRDREGLLP 9
RP+S+ SR P+ S P CP T+ +P EG P
Sbjct: 280 RPTSSASSRTPTSAPSTPSASPSCPRTSSSPAASEGSAP 164
>gb|BQ659781.1|BQ659781 HF01L05w HF Hordeum vulgare subsp. vulgare cDNA clone HF01L05
3-PRIME, mRNA sequence
Length = 598
Score = 34.4 bits (69), Expect = 0.97
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -1 / -1
Query: 125 RPSSNEMSRIPSMLFPMDSNGPLCPHTTLNPRDREGLLP 9
RP+S+ SR P+ S P CP T+ +P EG P
Sbjct: 274 RPTSSASSRTPTSAPSTPSASPSCPRTSSSPAASEGSAP 158
>gb|BQ665355.1|BQ665355 HX03C12u HX Hordeum vulgare subsp. vulgare cDNA clone HX03C12
3-PRIME, mRNA sequence
Length = 489
Score = 34.4 bits (69), Expect = 0.97
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -1 / -2
Query: 125 RPSSNEMSRIPSMLFPMDSNGPLCPHTTLNPRDREGLLP 9
RP+S+ SR P+ S P CP T+ +P EG P
Sbjct: 266 RPTSSASSRTPTSAPSTPSASPSCPRTSSSPAASEGSAP 150
>gb|BQ665484.1|BQ665484 HX03N05u HX Hordeum vulgare subsp. vulgare cDNA clone HX03N05
3-PRIME, mRNA sequence
Length = 475
Score = 34.4 bits (69), Expect = 0.97
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -1 / -1
Query: 125 RPSSNEMSRIPSMLFPMDSNGPLCPHTTLNPRDREGLLP 9
RP+S+ SR P+ S P CP T+ +P EG P
Sbjct: 286 RPTSSASSRTPTSAPSTPSASPSCPRTSSSPAASEGSAP 170
>gb|BQ665513.1|BQ665513 HX03P07u HX Hordeum vulgare subsp. vulgare cDNA clone HX03P07
3-PRIME, mRNA sequence
Length = 557
Score = 34.4 bits (69), Expect = 0.97
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -1 / -2
Query: 125 RPSSNEMSRIPSMLFPMDSNGPLCPHTTLNPRDREGLLP 9
RP+S+ SR P+ S P CP T+ +P EG P
Sbjct: 451 RPTSSASSRTPTSAPSTPSASPSCPRTSSSPAASEGSAP 335
>gb|BQ763724.1|BQ763724 EBro03_SQ005_B08 _R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ005_B08 5', mRNA sequence
Length = 505
Score = 34.4 bits (69), Expect = 0.97
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -1 / +3
Query: 125 RPSSNEMSRIPSMLFPMDSNGPLCPHTTLNPRDREGLLP 9
RP+S+ SR P+ S P CP T+ +P EG P
Sbjct: 309 RPTSSASSRTPTSAPSTPSASPSCPRTSSSPAASEGSAP 425
>gb|BU976229.1|BU976229 HA03F22u HA Hordeum vulgare subsp. vulgare cDNA clone HA03F22
3-PRIME, mRNA sequence
Length = 496
Score = 34.4 bits (69), Expect = 0.97
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -1 / -1
Query: 125 RPSSNEMSRIPSMLFPMDSNGPLCPHTTLNPRDREGLLP 9
RP+S+ SR P+ S P CP T+ +P EG P
Sbjct: 280 RPTSSASSRTPTSAPSTPSASPSCPRTSSSPAASEGSAP 164
>gb|BU976386.1|BU976386 HA03J23r HA Hordeum vulgare subsp. vulgare cDNA clone HA03J23
5-PRIME, mRNA sequence
Length = 596
Score = 34.4 bits (69), Expect = 0.97
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -1 / +2
Query: 125 RPSSNEMSRIPSMLFPMDSNGPLCPHTTLNPRDREGLLP 9
RP+S+ SR P+ S P CP T+ +P EG P
Sbjct: 323 RPTSSASSRTPTSAPSTPSASPSCPRTSSSPAASEGSAP 439
>gb|BU977321.1|BU977321 HA11D14r HA Hordeum vulgare subsp. vulgare cDNA clone HA11D14
5-PRIME, mRNA sequence
Length = 498
Score = 34.4 bits (69), Expect = 0.97
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -1 / +3
Query: 125 RPSSNEMSRIPSMLFPMDSNGPLCPHTTLNPRDREGLLP 9
RP+S+ SR P+ S P CP T+ +P EG P
Sbjct: 342 RPTSSASSRTPTSAPSTPSASPSCPRTSSSPAASEGSAP 458
>gb|BU978241.1|BU978241 HA12M24r HA Hordeum vulgare subsp. vulgare cDNA clone HA12M24
5-PRIME, mRNA sequence
Length = 604
Score = 34.4 bits (69), Expect = 0.97
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -1 / +1
Query: 125 RPSSNEMSRIPSMLFPMDSNGPLCPHTTLNPRDREGLLP 9
RP+S+ SR P+ S P CP T+ +P EG P
Sbjct: 343 RPTSSASSRTPTSAPSTPSASPSCPRTSSSPAASEGSAP 459
>gb|BU978242.1|BU978242 HA12M24u HA Hordeum vulgare subsp. vulgare cDNA clone HA12M24
3-PRIME, mRNA sequence
Length = 502
Score = 34.4 bits (69), Expect = 0.97
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -1 / -1
Query: 125 RPSSNEMSRIPSMLFPMDSNGPLCPHTTLNPRDREGLLP 9
RP+S+ SR P+ S P CP T+ +P EG P
Sbjct: 286 RPTSSASSRTPTSAPSTPSASPSCPRTSSSPAASEGSAP 170
>gb|BU978275.1|BU978275 HA12N19u HA Hordeum vulgare subsp. vulgare cDNA clone HA12N19
3-PRIME, mRNA sequence
Length = 321
Score = 34.4 bits (69), Expect = 0.97
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -1 / -3
Query: 125 RPSSNEMSRIPSMLFPMDSNGPLCPHTTLNPRDREGLLP 9
RP+S+ SR P+ S P CP T+ +P EG P
Sbjct: 286 RPTSSASSRTPTXAPSTPSASPSCPRTSSSPAASEGSAP 170
>gb|BU979036.1|BU979036 HA14P19r HA Hordeum vulgare subsp. vulgare cDNA clone HA14P19
5-PRIME, mRNA sequence
Length = 447
Score = 34.4 bits (69), Expect = 0.97
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -1 / +3
Query: 125 RPSSNEMSRIPSMLFPMDSNGPLCPHTTLNPRDREGLLP 9
RP+S+ SR P+ S P CP T+ +P EG P
Sbjct: 321 RPTSSASSRTPTSAPSTPSASPSCPRTSSSPAASEGSAP 437
>gb|BU979163.1|BU979163 HA15F10r HA Hordeum vulgare subsp. vulgare cDNA clone HA15F10
5-PRIME, mRNA sequence
Length = 493
Score = 34.4 bits (69), Expect = 0.97
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -1 / +1
Query: 125 RPSSNEMSRIPSMLFPMDSNGPLCPHTTLNPRDREGLLP 9
RP+S+ SR P+ S P CP T+ +P EG P
Sbjct: 343 RPTSSASSRTPTSAPSTPSASPSCPRTSSSPAASEGSAP 459
>gb|BU983240.1|BU983240 HA29A08r HA Hordeum vulgare subsp. vulgare cDNA clone HA29A08
5-PRIME, mRNA sequence
Length = 533
Score = 34.4 bits (69), Expect = 0.97
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -1 / +1
Query: 125 RPSSNEMSRIPSMLFPMDSNGPLCPHTTLNPRDREGLLP 9
RP+S+ SR P+ S P CP T+ +P EG P
Sbjct: 352 RPTSSASSRTPTSAPSTPSASPSCPRTSSSPAASEGSAP 468
>gb|BU998419.1|BU998419 HI11A02r HI Hordeum vulgare subsp. vulgare cDNA clone HI11A02
5-PRIME, mRNA sequence
Length = 619
Score = 34.4 bits (69), Expect = 0.97
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -1 / +2
Query: 125 RPSSNEMSRIPSMLFPMDSNGPLCPHTTLNPRDREGLLP 9
RP+S+ SR P+ S P CP T+ +P EG P
Sbjct: 353 RPTSSASSRTPTSAPSTPSASPSCPRTSSSPAASEGSAP 469
>gb|CA024657.1|CA024657 HZ49O22r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ49O22
5-PRIME, mRNA sequence
Length = 569
Score = 34.4 bits (69), Expect = 0.97
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -1 / +3
Query: 125 RPSSNEMSRIPSMLFPMDSNGPLCPHTTLNPRDREGLLP 9
RP+S+ SR P+ S P CP T+ +P EG P
Sbjct: 324 RPTSSASSRTPTSAPSTPSASPSCPRTSSSPAASEGSAP 440
>gb|CA029928.1|CA029928 HX05J16r HX Hordeum vulgare subsp. vulgare cDNA clone HX05J16
5-PRIME, mRNA sequence
Length = 594
Score = 34.4 bits (69), Expect = 0.97
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -1 / +3
Query: 125 RPSSNEMSRIPSMLFPMDSNGPLCPHTTLNPRDREGLLP 9
RP+S+ SR P+ S P CP T+ +P EG P
Sbjct: 333 RPTSSASSRTPTSAPSTPSASPSCPRTSSSPAASEGSAP 449
>gb|CA030709.1|CA030709 HX07O04r HX Hordeum vulgare subsp. vulgare cDNA clone HX07O04
5-PRIME, mRNA sequence
Length = 605
Score = 34.4 bits (69), Expect = 0.97
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -1 / +2
Query: 125 RPSSNEMSRIPSMLFPMDSNGPLCPHTTLNPRDREGLLP 9
RP+S+ SR P+ S P CP T+ +P EG P
Sbjct: 344 RPTSSASSRTPTSAPSTPSASPSCPRTSSSPAASEGSAP 460
>gb|CA031386.1|CA031386 HX09M23r HX Hordeum vulgare subsp. vulgare cDNA clone HX09M23
5-PRIME, mRNA sequence
Length = 543
Score = 34.4 bits (69), Expect = 0.97
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -1 / +3
Query: 125 RPSSNEMSRIPSMLFPMDSNGPLCPHTTLNPRDREGLLP 9
RP+S+ SR P+ S P CP T+ +P EG P
Sbjct: 270 RPTSSASSRTPTSAPSTPSASPSCPRTSSSPAASEGSAP 386
>gb|CA031723.1|CA031723 HX10P02r HX Hordeum vulgare subsp. vulgare cDNA clone HX10P02
5-PRIME, mRNA sequence
Length = 599
Score = 34.4 bits (69), Expect = 0.97
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -1 / +1
Query: 125 RPSSNEMSRIPSMLFPMDSNGPLCPHTTLNPRDREGLLP 9
RP+S+ SR P+ S P CP T+ +P EG P
Sbjct: 349 RPTSSASSRTPTSAPSTPSASPSCPRTSSSPAASEGSAP 465
>gb|CA032195.1|CA032195 HX12E22r HX Hordeum vulgare subsp. vulgare cDNA clone HX12E22
5-PRIME, mRNA sequence
Length = 630
Score = 34.4 bits (69), Expect = 0.97
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -1 / +3
Query: 125 RPSSNEMSRIPSMLFPMDSNGPLCPHTTLNPRDREGLLP 9
RP+S+ SR P+ S P CP T+ +P EG P
Sbjct: 345 RPTSSASSRTPTSAPSTPSASPSCPRTSSSPAASEGSAP 461
>gb|CA032381.1|CA032381 HX12N18r HX Hordeum vulgare subsp. vulgare cDNA clone HX12N18
5-PRIME, mRNA sequence
Length = 341
Score = 34.4 bits (69), Expect = 0.97
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -1 / +1
Query: 125 RPSSNEMSRIPSMLFPMDSNGPLCPHTTLNPRDREGLLP 9
RP+S+ SR P+ S P CP T+ +P EG P
Sbjct: 220 RPTSSASSRTPTSAPSTPSASPSCPRTSSSPAASEGSAP 336
>gb|CA032581.1|CA032581 HX13I11r HX Hordeum vulgare subsp. vulgare cDNA clone HX13I11
5-PRIME, mRNA sequence
Length = 607
Score = 34.4 bits (69), Expect = 0.97
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -1 / +1
Query: 125 RPSSNEMSRIPSMLFPMDSNGPLCPHTTLNPRDREGLLP 9
RP+S+ SR P+ S P CP T+ +P EG P
Sbjct: 334 RPTSSASSRTPTSAPSTPSASPSCPRTSSSPAASEGSAP 450
>gb|CB858327.1|CB858327 HI06J23w HI Hordeum vulgare subsp. vulgare cDNA clone HI06J23
3-PRIME, mRNA sequence
Length = 615
Score = 34.4 bits (69), Expect = 0.97
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -1 / -2
Query: 125 RPSSNEMSRIPSMLFPMDSNGPLCPHTTLNPRDREGLLP 9
RP+S+ SR P+ S P CP T+ +P EG P
Sbjct: 275 RPTSSASSRTPTSAPSTPSASPSCPRTSSSPAASEGSAP 159
>gb|CB859610.1|CB859610 HI11A02w HI Hordeum vulgare subsp. vulgare cDNA clone HI11A02
3-PRIME, mRNA sequence
Length = 564
Score = 34.4 bits (69), Expect = 0.97
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -1 / -2
Query: 125 RPSSNEMSRIPSMLFPMDSNGPLCPHTTLNPRDREGLLP 9
RP+S+ SR P+ S P CP T+ +P EG P
Sbjct: 266 RPTSSASSRTPTSAPSTPSASPSCPRTSSSPAASEGSAP 150
>gb|CB874456.1|CB874456 HX05F05w HX Hordeum vulgare subsp. vulgare cDNA clone HX05F05
3-PRIME, mRNA sequence
Length = 619
Score = 34.4 bits (69), Expect = 0.97
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -1 / -3
Query: 125 RPSSNEMSRIPSMLFPMDSNGPLCPHTTLNPRDREGLLP 9
RP+S+ SR P+ S P CP T+ +P EG P
Sbjct: 281 RPTSSASSRTPTSAPSTPSASPSCPRTSSSPAASEGSAP 165
>gb|CB874549.1|CB874549 HX05J16w HX Hordeum vulgare subsp. vulgare cDNA clone HX05J16
3-PRIME, mRNA sequence
Length = 604
Score = 34.4 bits (69), Expect = 0.97
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -1 / -1
Query: 125 RPSSNEMSRIPSMLFPMDSNGPLCPHTTLNPRDREGLLP 9
RP+S+ SR P+ S P CP T+ +P EG P
Sbjct: 286 RPTSSASSRTPTSAPSTPSASPSCPRTSSSPAASEGSAP 170
>gb|CB875299.1|CB875299 HX07O04w HX Hordeum vulgare subsp. vulgare cDNA clone HX07O04
3-PRIME, mRNA sequence
Length = 617
Score = 34.4 bits (69), Expect = 0.97
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -1 / -3
Query: 125 RPSSNEMSRIPSMLFPMDSNGPLCPHTTLNPRDREGLLP 9
RP+S+ SR P+ S P CP T+ +P EG P
Sbjct: 282 RPTSSASSRTPTSAPSTPSASPSCPRTSSSPAASEGSAP 166
>gb|CB875942.1|CB875942 HX09M23w HX Hordeum vulgare subsp. vulgare cDNA clone HX09M23
3-PRIME, mRNA sequence
Length = 603
Score = 34.4 bits (69), Expect = 0.97
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -1 / -2
Query: 125 RPSSNEMSRIPSMLFPMDSNGPLCPHTTLNPRDREGLLP 9
RP+S+ SR P+ S P CP T+ +P EG P
Sbjct: 275 RPTSSASSRTPTSAPSTPSASPSCPRTSSSPAASEGSAP 159
>gb|CB876024.1|CB876024 HX10A23w HX Hordeum vulgare subsp. vulgare cDNA clone HX10A23
3-PRIME, mRNA sequence
Length = 594
Score = 34.4 bits (69), Expect = 0.97
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -1 / -2
Query: 125 RPSSNEMSRIPSMLFPMDSNGPLCPHTTLNPRDREGLLP 9
RP+S+ SR P+ S P CP T+ +P EG P
Sbjct: 281 RPTSSASSRTPTSAPSTPSASPSCPRTSSSPAASEGSAP 165
>gb|CB879318.1|CB879318 HP11L19T HP Hordeum vulgare subsp. vulgare cDNA clone HP11L19
5-PRIME, mRNA sequence
Length = 556
Score = 34.4 bits (69), Expect = 0.97
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -1 / +2
Query: 125 RPSSNEMSRIPSMLFPMDSNGPLCPHTTLNPRDREGLLP 9
RP+S+ SR P+ S P CP T+ +P EG P
Sbjct: 278 RPTSSASSRTPTSAPSTPSASPSCPRTSSSPAASEGSAP 394
>gb|CV055599.1|CV055599 BNEL121d6 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL121d6 5' similar to Histone H3,
mRNA sequence
Length = 584
Score = 34.4 bits (69), Expect = 0.97
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -1 / +3
Query: 125 RPSSNEMSRIPSMLFPMDSNGPLCPHTTLNPRDREGLLP 9
RP+S+ SR P+ S P CP T+ +P EG P
Sbjct: 333 RPTSSASSRTPTSAPSTPSASPSCPRTSSSPAASEGSAP 449
>gb|CK122920.1|CK122920 BES1824101e06 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010E061 5-PRIME, mRNA sequence
Length = 705
Score = 34.4 bits (69), Expect = 0.97
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -1 / +2
Query: 125 RPSSNEMSRIPSMLFPMDSNGPLCPHTTLNPRDREGLLP 9
RP+S+ SR P+ S P CP T+ +P EG P
Sbjct: 365 RPTSSASSRTPTSAPSTPSASPSCPRTSSSPAASEGSAP 481
>gb|CK125231.1|CK125231 BES1824107h04 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010H047 5-PRIME, mRNA sequence
Length = 625
Score = 34.4 bits (69), Expect = 0.97
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -1 / +3
Query: 125 RPSSNEMSRIPSMLFPMDSNGPLCPHTTLNPRDREGLLP 9
RP+S+ SR P+ S P CP T+ +P EG P
Sbjct: 342 RPTSSASSRTPTSAPSTPSASPSCPRTSSSPAASEGSAP 458
>gb|BI951055.1|BI951055 HVSMEl0024C19f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0024C19f, mRNA sequence
Length = 854
Score = 26.2 bits (51), Expect(3) = 1.2
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +1 / -2
Query: 739 ECITRNPCTNRCSNTIGGFQC 801
+C RN C C++ + GF C
Sbjct: 97 DCCFRNGCCGDCNSWLLGFSC 35
Score = 23.4 bits (45), Expect(3) = 1.2
Identities = 7/18 (38%), Positives = 9/18 (50%)
Frame = +1 / -1
Query: 313 CSSGNNIIDGSCSGVACC 366
C +G +G C G CC
Sbjct: 449 CQNGGCCGNGCCDGKGCC 396
Score = 22.1 bits (42), Expect(3) = 1.2
Identities = 16/42 (38%), Positives = 16/42 (38%)
Frame = +1 / -2
Query: 628 NAYCYNSSNGIGYRCNCSSGFEGNPYLQGPNGCTDINECITR 753
N C GI Y N SSG G NGC N C R
Sbjct: 256 NGCCGCRGVGI*YWGNNSSGR*GKYCWGVGNGCCTGNGCCGR 131
>gb|CB884152.1|CB884152 HF04P03r HF Hordeum vulgare subsp. vulgare cDNA clone HF04P03
5-PRIME, mRNA sequence
Length = 594
Score = 27.1 bits (53), Expect(2) = 1.3
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = +1 / -2
Query: 634 YCYNSSNGIGYRCNCSSG 687
YC SS + Y C C SG
Sbjct: 233 YCICSSRSVWYSCPCGSG 180
Score = 24.4 bits (47), Expect(2) = 1.3
Identities = 12/39 (30%), Positives = 14/39 (35%)
Frame = +1 / -2
Query: 742 CITRNPCTNRCSNTIGGFQCTCPAGMSGDGLKEGSGCNG 858
C R C + G C G G+G G GC G
Sbjct: 155 CCDRIGCCSPNGGCCGNGFCCQNGGCCGNGCCGGKGCCG 39
>gb|BF626608.2|BF626608 HVSMEa0018O04f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0018O04f, mRNA sequence
Length = 765
Score = 33.9 bits (68), Expect = 1.3
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +2 / -3
Query: 602 CPDHTPAQRMPTATTHQTESVTAAIAPVDSRGTHTCKGQ 718
CP HT AQ + + Q + A AP+D + H GQ
Sbjct: 457 CPSHTYAQGLAQSPQTQDSKIVRAPAPIDVQSDHQDVGQ 341
>gb|BE194094.2|BE194094 HVSMEh0083P19f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0083P19f, mRNA sequence
Length = 571
Score = 25.7 bits (50), Expect(2) = 1.7
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = +1 / -2
Query: 634 YCYNSSNGIGYRCNCSSG 687
YC S+ + Y C C SG
Sbjct: 429 YCICSARSVWYSCPCGSG 376
Score = 25.3 bits (49), Expect(2) = 1.7
Identities = 13/45 (28%), Positives = 16/45 (35%)
Frame = +1 / -2
Query: 724 CTDINECITRNPCTNRCSNTIGGFQCTCPAGMSGDGLKEGSGCNG 858
C + C R C + G C G G+G G GC G
Sbjct: 369 CGEHGCCCDRIGCCSPNGGCCGNGFCCQNGGCCGNGCCGGKGCCG 235
>gb|AV833913.1|AV833913 AV833913 K. Sato unpublished cDNA library: Hordeum vulgare subsp.
vulgare shoots germination Hordeum vulgare subsp.
vulgare cDNA clone bags11b20, mRNA sequence
Length = 653
Score = 33.5 bits (67), Expect = 2.0
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +1 / -3
Query: 748 TRNPCTNRCSNTIGGFQCTCPAGMSGDGLKE 840
TRN T G C CPAG GDG+K+
Sbjct: 531 TRNRKTFSACQESGERNCKCPAGFRGDGVKK 439
>gb|BF253820.3|BF253820 HVSMEf0002D10f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0002D10f, mRNA sequence
Length = 702
Score = 33.5 bits (67), Expect = 2.0
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +1 / +3
Query: 748 TRNPCTNRCSNTIGGFQCTCPAGMSGDGLKE 840
TRN T G C CPAG GDG+K+
Sbjct: 129 TRNRKTFSACQESGERNCKCPAGFRGDGVKK 221
>gb|BQ760034.1|BQ760034 EBpi07_SQ003_B06_R pistil, 12 DPA, no treatment, cv Optic, EBpi07
Hordeum vulgare subsp. vulgare cDNA clone
EBpi07_SQ003_B06 5', mRNA sequence
Length = 387
Score = 33.5 bits (67), Expect = 2.0
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +1 / -2
Query: 748 TRNPCTNRCSNTIGGFQCTCPAGMSGDGLKEGSGCNG 858
TRNPC + +G + C G SG G + G+G G
Sbjct: 275 TRNPCRGGGTPRLGPYCCGRGCGRSGRGRRTGAGAAG 165
>gb|BE454951.3|BE454951 HVSMEh0095K05f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0095K05f, mRNA sequence
Length = 714
Score = 25.7 bits (50), Expect(2) = 2.3
Identities = 12/39 (30%), Positives = 14/39 (35%)
Frame = +1 / -1
Query: 742 CITRNPCTNRCSNTIGGFQCTCPAGMSGDGLKEGSGCNG 858
C R C + G C G G+G G GC G
Sbjct: 330 CCDRIGCCSPNGGCCGNGFCCQNGGCCGNGCSVGKGCCG 214
Score = 24.8 bits (48), Expect(2) = 2.3
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = +1 / -1
Query: 634 YCYNSSNGIGYRCNCSSG 687
YC S + Y C C SG
Sbjct: 408 YCICSCRSVWYSCPCGSG 355
>gb|AL504925.1|AL504925 AL504925 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW06N13V 5', mRNA sequence
Length = 681
Score = 33.0 bits (66), Expect = 2.5
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +3 / +1
Query: 831 PQGRKWLQWSKHTSDCNSCRISSASASPHP 920
P R W +W + T C +C S+AS S P
Sbjct: 313 PAWRSWWRWGRRTWWCRACSPSAASPSTSP 402
>gb|BI950925.1|BI950925 HVSMEl0023K23f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0023K23f, mRNA sequence
Length = 988
Score = 33.0 bits (66), Expect = 2.5
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +3 / +2
Query: 831 PQGRKWLQWSKHTSDCNSCRISSASASPHP 920
P R W +W + T C +C S+AS S P
Sbjct: 62 PAWRSWWRWGRRTWWCRACSPSAASPSTSP 151
>gb|BE559173.1|BE559173 HV_CEb0023M19f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0023M19f, mRNA sequence
Length = 557
Score = 33.0 bits (66), Expect = 2.5
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +3 / +3
Query: 831 PQGRKWLQWSKHTSDCNSCRISSASASPHP 920
P R W +W + T C +C S+AS S P
Sbjct: 300 PAWRSWWRWGRRTWWCRACSPSAASPSTSP 389
>gb|BF261426.1|BF261426 HV_CEa0001E02f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0001E02f, mRNA sequence
Length = 626
Score = 33.0 bits (66), Expect = 2.5
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +3 / +3
Query: 831 PQGRKWLQWSKHTSDCNSCRISSASASPHP 920
P R W +W + T C +C S+AS S P
Sbjct: 102 PAWRSWWRWGRRTWWCRACSPSAASPSTSP 191
>gb|BF266534.3|BF266534 HV_CEa0015G07f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0015G07f, mRNA sequence
Length = 566
Score = 33.0 bits (66), Expect = 2.5
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +3 / +2
Query: 831 PQGRKWLQWSKHTSDCNSCRISSASASPHP 920
P R W +W + T C +C S+AS S P
Sbjct: 263 PAWRSWWRWGRRTWWCRACSPSAASPSTSP 352
>gb|AV932244.1|AV932244 AV932244 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal2n12 5', mRNA sequence
Length = 463
Score = 33.0 bits (66), Expect = 2.5
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +3 / +3
Query: 831 PQGRKWLQWSKHTSDCNSCRISSASASPHP 920
P R W +W + T C +C S+AS S P
Sbjct: 282 PAWRSWWRWGRRTWWCRACSPSAASPSTSP 371
>gb|AJ435669.1|AJ435669 AJ435669 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200058G02F1, mRNA sequence
Length = 565
Score = 33.0 bits (66), Expect = 2.5
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +3 / +2
Query: 3 RCW*EPLPVPWI*SCV 50
RCW PLP+PW+ C+
Sbjct: 395 RCWAHPLPLPWLWGCL 442
>gb|BJ470667.1|BJ470667 BJ470667 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal25n14 5', mRNA sequence
Length = 565
Score = 33.0 bits (66), Expect = 2.5
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +3 / +3
Query: 831 PQGRKWLQWSKHTSDCNSCRISSASASPHP 920
P R W +W + T C +C S+AS S P
Sbjct: 201 PAWRSWWRWGRRTWWCRACSPSAASPSTSP 290
>gb|BQ460311.1|BQ460311 HA06K09r HA Hordeum vulgare subsp. vulgare cDNA clone HA06K09
5-PRIME, mRNA sequence
Length = 471
Score = 33.0 bits (66), Expect = 2.5
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = -1 / +1
Query: 125 RPSSNEMSRIPSMLFPMDSNGPLCPHTTLNPRDREGLLP 9
RP+S+ SR P+ S P CP T +P EG P
Sbjct: 352 RPTSSASSRTPTSAPSTPSASPSCPRTFSSPAASEGSAP 468
>gb|BQ664221.1|BQ664221 HV02G10u HV Hordeum vulgare subsp. vulgare cDNA clone HV02G10
3-PRIME, mRNA sequence
Length = 525
Score = 33.0 bits (66), Expect = 2.5
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +3 / -3
Query: 3 RCW*EPLPVPWI*SCV 50
RCW PLP+PW+ C+
Sbjct: 223 RCWAHPLPLPWLWGCL 176
>gb|BJ460680.1|BJ460680 BJ460680 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak41m21 3', mRNA sequence
Length = 354
Score = 27.1 bits (53), Expect(2) = 2.6
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +1 / +2
Query: 571 VNGSSCEEAKLSGSYACAENAYCYNSSNGIGYRCNCSSGFEG 696
++GSS + LSGS +C + C +SS+ SS G
Sbjct: 212 LSGSSSSGSSLSGSSSCGSS*GCASSSSSSSSSSRGSSAGNG 337
Score = 24.8 bits (48), Expect(2) = 2.6
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +1 / +3
Query: 172 TANSSVNLEGTVFTFSDTRNKFTALGC 252
++NS+ +LEG + T +K T L C
Sbjct: 135 SSNSTYSLEGYFYLPQATSSKITQLAC 215
>gb|BG415934.1|BG415934 HVSMEk0009B16f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0009B16f, mRNA sequence
Length = 946
Score = 25.7 bits (50), Expect(2) = 3.0
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +1 / +2
Query: 712 GPNGCTDINECITRNPC 762
G C DI+EC T++ C
Sbjct: 428 GVKSCEDIDECKTKSAC 478
Score = 24.4 bits (47), Expect(2) = 3.0
Identities = 6/12 (50%), Positives = 9/12 (75%)
Frame = +1 / +2
Query: 772 CSNTIGGFQCTC 807
C NT G ++C+C
Sbjct: 497 CENTWGSYECSC 532
>gb|BJ456482.1|BJ456482 BJ456482 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak22c11 3', mRNA sequence
Length = 739
Score = 25.7 bits (50), Expect(2) = 3.0
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +1 / -3
Query: 712 GPNGCTDINECITRNPC 762
G C DI+EC T++ C
Sbjct: 614 GVKSCEDIDECKTKSAC 564
Score = 24.4 bits (47), Expect(2) = 3.0
Identities = 6/12 (50%), Positives = 9/12 (75%)
Frame = +1 / -3
Query: 772 CSNTIGGFQCTC 807
C NT G ++C+C
Sbjct: 545 CENTWGSYECSC 510
>gb|BQ767774.1|BQ767774 EBro08_SQ009_F21 _R root, 3 week, drought-stressed, cv Optic,
EBro08 Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ009_F21 5', mRNA sequence
Length = 444
Score = 26.6 bits (52), Expect(2) = 3.0
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +2 / +2
Query: 584 AVKRRNCPDHTPAQRMPTATTH 649
A +RR C H+PA+ P ++H
Sbjct: 65 ARRRRRCGRHSPAEPSPRRSSH 130
Score = 25.3 bits (49), Expect(2) = 3.0
Identities = 11/31 (35%), Positives = 13/31 (41%)
Frame = +1 / +3
Query: 715 PNGCTDINECITRNPCTNRCSNTIGGFQCTC 807
P C D C NP T RC + + TC
Sbjct: 327 PWKCCDKPTCTKSNPPTCRCGDEVDKCAPTC 419
>gb|CV055894.1|CV055894 BNEL124f2 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL124f2 5' similar to Oryza sativa,
mRNA sequence
Length = 714
Score = 25.7 bits (50), Expect(2) = 3.0
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +1 / +2
Query: 712 GPNGCTDINECITRNPCTNRCSN 780
G + C DI+EC+ R C + N
Sbjct: 71 GIHKCDDIDECMERTDCQCKVCN 139
Score = 24.4 bits (47), Expect(2) = 3.0
Identities = 6/16 (37%), Positives = 10/16 (62%)
Frame = +1 / +2
Query: 772 CSNTIGGFQCTCPAGM 819
C NT+ ++C C G+
Sbjct: 140 CQNTLRSYECRCLGGL 187
>gb|BU970366.1|BU970366 HB14G08r BC Hordeum vulgare subsp. vulgare cDNA clone HB14G08
5-PRIME, mRNA sequence
Length = 700
Score = 25.7 bits (50), Expect(2) = 3.0
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +1 / +1
Query: 712 GPNGCTDINECITRNPC 762
G C DI+EC T++ C
Sbjct: 460 GVKSCEDIDECKTKSAC 510
Score = 24.4 bits (47), Expect(2) = 3.0
Identities = 6/12 (50%), Positives = 9/12 (75%)
Frame = +1 / +1
Query: 772 CSNTIGGFQCTC 807
C NT G ++C+C
Sbjct: 529 CENTWGSYECSC 564
>gb|BJ450247.1|BJ450247 BJ450247 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak28n01 5', mRNA sequence
Length = 684
Score = 25.7 bits (50), Expect(2) = 3.0
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +1 / +2
Query: 712 GPNGCTDINECITRNPC 762
G C DI+EC T++ C
Sbjct: 107 GVKSCEDIDECKTKSAC 157
Score = 24.4 bits (47), Expect(2) = 3.0
Identities = 6/12 (50%), Positives = 9/12 (75%)
Frame = +1 / +2
Query: 772 CSNTIGGFQCTC 807
C NT G ++C+C
Sbjct: 176 CENTWGSYECSC 211
>gb|BJ457671.1|BJ457671 BJ457671 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak28n01 3', mRNA sequence
Length = 682
Score = 25.7 bits (50), Expect(2) = 3.0
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +1 / -3
Query: 712 GPNGCTDINECITRNPC 762
G C DI+EC T++ C
Sbjct: 575 GVKSCEDIDECKTKSAC 525
Score = 24.4 bits (47), Expect(2) = 3.0
Identities = 6/12 (50%), Positives = 9/12 (75%)
Frame = +1 / -3
Query: 772 CSNTIGGFQCTC 807
C NT G ++C+C
Sbjct: 506 CENTWGSYECSC 471
>gb|AV921943.1|AV921943 AV921943 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags19c20 3', mRNA sequence
Length = 678
Score = 25.7 bits (50), Expect(2) = 3.0
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +1 / -3
Query: 712 GPNGCTDINECITRNPC 762
G C DI+EC T++ C
Sbjct: 607 GVKSCEDIDECKTKSAC 557
Score = 24.4 bits (47), Expect(2) = 3.0
Identities = 6/12 (50%), Positives = 9/12 (75%)
Frame = +1 / -3
Query: 772 CSNTIGGFQCTC 807
C NT G ++C+C
Sbjct: 538 CENTWGSYECSC 503
>gb|AV917983.1|AV917983 AV917983 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags17f01 3', mRNA sequence
Length = 669
Score = 25.7 bits (50), Expect(2) = 3.1
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +1 / -1
Query: 712 GPNGCTDINECITRNPC 762
G C DI+EC T++ C
Sbjct: 606 GVKSCEDIDECKTKSAC 556
Score = 24.4 bits (47), Expect(2) = 3.1
Identities = 6/12 (50%), Positives = 9/12 (75%)
Frame = +1 / -1
Query: 772 CSNTIGGFQCTC 807
C NT G ++C+C
Sbjct: 537 CENTWGSYECSC 502
>gb|BG418189.1|BG418189 HVSMEk0021N02f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0021N02f, mRNA sequence
Length = 666
Score = 25.7 bits (50), Expect(2) = 3.1
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +1 / +2
Query: 712 GPNGCTDINECITRNPC 762
G C DI+EC T++ C
Sbjct: 428 GVKSCEDIDECKTKSAC 478
Score = 24.4 bits (47), Expect(2) = 3.1
Identities = 6/12 (50%), Positives = 9/12 (75%)
Frame = +1 / +2
Query: 772 CSNTIGGFQCTC 807
C NT G ++C+C
Sbjct: 497 CENTWGSYECSC 532
>gb|BU989766.1|BU989766 HF22K07r HF Hordeum vulgare subsp. vulgare cDNA clone HF22K07
5-PRIME, mRNA sequence
Length = 643
Score = 25.7 bits (50), Expect(2) = 3.1
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +1 / +1
Query: 712 GPNGCTDINECITRNPC 762
G C DI+EC T++ C
Sbjct: 484 GVKSCEDIDECKTKSAC 534
Score = 24.4 bits (47), Expect(2) = 3.1
Identities = 6/12 (50%), Positives = 9/12 (75%)
Frame = +1 / +1
Query: 772 CSNTIGGFQCTC 807
C NT G ++C+C
Sbjct: 553 CENTWGSYECSC 588
>gb|BU990139.1|BU990139 HF24D07r HF Hordeum vulgare subsp. vulgare cDNA clone HF24D07
5-PRIME, mRNA sequence
Length = 645
Score = 25.7 bits (50), Expect(2) = 3.1
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +1 / +1
Query: 712 GPNGCTDINECITRNPC 762
G C DI+EC T++ C
Sbjct: 484 GVKSCEDIDECKTKSAC 534
Score = 24.4 bits (47), Expect(2) = 3.1
Identities = 6/12 (50%), Positives = 9/12 (75%)
Frame = +1 / +1
Query: 772 CSNTIGGFQCTC 807
C NT G ++C+C
Sbjct: 553 CENTWGSYECSC 588
>gb|AV918394.1|AV918394 AV918394 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags20o11 3', mRNA sequence
Length = 634
Score = 25.7 bits (50), Expect(2) = 3.1
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +1 / -3
Query: 712 GPNGCTDINECITRNPC 762
G C DI+EC T++ C
Sbjct: 623 GVKSCEDIDECKTKSAC 573
Score = 24.4 bits (47), Expect(2) = 3.1
Identities = 6/12 (50%), Positives = 9/12 (75%)
Frame = +1 / -3
Query: 772 CSNTIGGFQCTC 807
C NT G ++C+C
Sbjct: 554 CENTWGSYECSC 519
>gb|BU973882.1|BU973882 HB26E03r BC Hordeum vulgare subsp. vulgare cDNA clone HB26E03
5-PRIME, mRNA sequence
Length = 606
Score = 25.7 bits (50), Expect(2) = 3.1
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +1 / +2
Query: 712 GPNGCTDINECITRNPC 762
G C DI+EC T++ C
Sbjct: 299 GVKSCEDIDECKTKSAC 349
Score = 24.4 bits (47), Expect(2) = 3.1
Identities = 6/12 (50%), Positives = 9/12 (75%)
Frame = +1 / +2
Query: 772 CSNTIGGFQCTC 807
C NT G ++C+C
Sbjct: 368 CENTWGSYECSC 403
>gb|BQ768170.1|BQ768170 EBro08_SQ010_K19_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ010_K19 5', mRNA sequence
Length = 537
Score = 25.7 bits (50), Expect(2) = 3.1
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +1 / +2
Query: 712 GPNGCTDINECITRNPC 762
G C DI+EC T++ C
Sbjct: 269 GVKSCEDIDECKTKSAC 319
Score = 24.4 bits (47), Expect(2) = 3.1
Identities = 6/12 (50%), Positives = 9/12 (75%)
Frame = +1 / +2
Query: 772 CSNTIGGFQCTC 807
C NT G ++C+C
Sbjct: 338 CENTWGSYECSC 373
>gb|BU966837.1|BU966837 HB02I04r BC Hordeum vulgare subsp. vulgare cDNA clone HB02I04
5-PRIME, mRNA sequence
Length = 496
Score = 25.7 bits (50), Expect(2) = 3.1
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +1 / +3
Query: 712 GPNGCTDINECITRNPC 762
G C DI+EC T++ C
Sbjct: 15 GVKSCEDIDECKTKSAC 65
Score = 24.4 bits (47), Expect(2) = 3.1
Identities = 6/12 (50%), Positives = 9/12 (75%)
Frame = +1 / +3
Query: 772 CSNTIGGFQCTC 807
C NT G ++C+C
Sbjct: 84 CENTWGSYECSC 119
>gb|BI779124.1|BI779124 EBro01_SQ003_B07_R root, 3 week, hydroponic grown, no treatment, cv
Optic, EBro01 Hordeum vulgare subsp. vulgare cDNA clone
EBro01_SQ003_B07 5', mRNA sequence
Length = 330
Score = 32.6 bits (65), Expect = 3.5
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = -2 / +1
Query: 463 HMASNRNRCRCWLY*YY*TLSPASLALWEPALGS 362
H S+ + C+ WLY Y + P +L PA+G+
Sbjct: 55 HHPSSSSTCQWWLYCYLGRIKPTNLKKGSPAIGN 156
>gb|AJ434398.1|AJ434398 AJ434398 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200024H02F1, mRNA sequence
Length = 470
Score = 32.6 bits (65), Expect = 3.5
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = -1 / +3
Query: 125 RPSSNEMSRIPSMLFPMDSNGPLCPHTTLNPRDREGLLP 9
RP+S+ SR P+ S P CP T+ +P G +P
Sbjct: 183 RPTSSASSRTPTSAPSTPSASPSCPRTSSSPAASAGSVP 299
>gb|BQ763477.1|BQ763477 EBro02_SQ008_C13_R root, 3 week, hydroponic grown, low nitrogen, cv
Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone
EBro02_SQ008_C13 5', mRNA sequence
Length = 539
Score = 32.6 bits (65), Expect = 3.5
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +3 / +2
Query: 831 PQGRKWLQWSKHTSDCNSCRISSASASPHP 920
P R W +W + T C +C S+AS S P
Sbjct: 362 PAWRSWWRWGRXTWWCRACSPSAASPSTSP 451
>gb|BU978999.1|BU978999 HA14N24r HA Hordeum vulgare subsp. vulgare cDNA clone HA14N24
5-PRIME, mRNA sequence
Length = 467
Score = 32.6 bits (65), Expect = 3.5
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -1 / +1
Query: 125 RPSSNEMSRIPSMLFPMDSNGPLCPHTTLNPRDREG 18
RP+S+ SR P+ S P CP T+ +P EG
Sbjct: 355 RPTSSASSRTPTSAPSTPSASPSCPRTSSSPAASEG 462
>gb|AL500176.1|AL500176 AL500176 Hordeum vulgare Barke etiolated leaves Hordeum vulgare
subsp. vulgare cDNA clone HK05E09r 3', mRNA sequence
Length = 480
Score = 27.1 bits (53), Expect(2) = 3.5
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +1 / +2
Query: 571 VNGSSCEEAKLSGSYACAENAYCYNSSNGIGYRCNCSSGFEG 696
++GSS + LSGS +C + C +SS+ SS G
Sbjct: 281 LSGSSSSGSSLSGSSSCGSS*GCASSSSSSSSSSRGSSAGNG 406
Score = 24.8 bits (48), Expect(2) = 3.5
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +1 / +3
Query: 172 TANSSVNLEGTVFTFSDTRNKFTALGC 252
++NS+ +LEG + T +K T L C
Sbjct: 204 SSNSTYSLEGYFYLPQATSSKITQLAC 284
>gb|BU999943.1|BU999943 HS17A16u HS Hordeum vulgare subsp. vulgare cDNA clone HS17A16
3-PRIME, mRNA sequence
Length = 536
Score = 27.1 bits (53), Expect(2) = 3.9
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +1 / +2
Query: 571 VNGSSCEEAKLSGSYACAENAYCYNSSNGIGYRCNCSSGFEG 696
++GSS + LSGS +C + C +SS+ SS G
Sbjct: 254 LSGSSSSGSSLSGSSSCGSS*GCASSSSSSSSSSRGSSAGNG 379
Score = 24.8 bits (48), Expect(2) = 3.9
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +1 / +3
Query: 172 TANSSVNLEGTVFTFSDTRNKFTALGC 252
++NS+ +LEG + T +K T L C
Sbjct: 177 SSNSTYSLEGYFYLPQATSSKITQLAC 257
>gb|BE195467.2|BE195467 HVSMEh0089M03f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0089M03f, mRNA sequence
Length = 840
Score = 24.8 bits (48), Expect(2) = 4.0
Identities = 12/40 (30%), Positives = 15/40 (37%)
Frame = +1 / -1
Query: 742 CITRNPCTNRCSNTIGGFQCTCPAGMSGDGLKEGSGCNGV 861
C R C + G C G G+G G GC G+
Sbjct: 240 CCDRIGCCSPNGGCCGNGFCCQNGGCCGNGCCGGKGCCGM 121
Score = 24.8 bits (48), Expect(2) = 4.0
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = +1 / -1
Query: 634 YCYNSSNGIGYRCNCSSG 687
YC S + Y C C SG
Sbjct: 318 YCICSCRSVWYSCPCGSG 265
>gb|AL507003.1|AL507003 AL507003 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY04O02T 5',
mRNA sequence
Length = 700
Score = 26.6 bits (52), Expect(2) = 4.1
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = +1 / -3
Query: 769 RCSNTIGGFQCTCPAGM 819
+C NT G ++C C G+
Sbjct: 518 KCKNTWGSYECGCGGGL 468
Score = 23.0 bits (44), Expect(2) = 4.1
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = +1 / -3
Query: 712 GPNGCTDINECITRNPC 762
G + C D++EC R C
Sbjct: 584 GVHKCIDVDECKERTAC 534
>gb|BF255455.2|BF255455 HVSMEf0006O12f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0006O12f, mRNA sequence
Length = 605
Score = 26.6 bits (52), Expect(2) = 4.1
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +2 / +1
Query: 584 AVKRRNCPDHTPAQRMPTATTH 649
A +RR C H+PA+ P ++H
Sbjct: 79 ARRRRRCGRHSPAEPSPRRSSH 144
Score = 25.3 bits (49), Expect(2) = 4.1
Identities = 11/31 (35%), Positives = 13/31 (41%)
Frame = +1 / +2
Query: 715 PNGCTDINECITRNPCTNRCSNTIGGFQCTC 807
P C D C NP T RC + + TC
Sbjct: 341 PWKCCDKPTCTKSNPPTCRCGDEVDKCAPTC 433
>gb|AV920587.1|AV920587 AV920587 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags14m01 3', mRNA sequence
Length = 673
Score = 26.6 bits (52), Expect(2) = 4.1
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = +1 / -3
Query: 769 RCSNTIGGFQCTCPAGM 819
+C NT G ++C C G+
Sbjct: 533 KCKNTWGSYECGCGGGL 483
Score = 23.0 bits (44), Expect(2) = 4.1
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = +1 / -3
Query: 712 GPNGCTDINECITRNPC 762
G + C D++EC R C
Sbjct: 599 GVHKCIDVDECKERTAC 549
>gb|AV915488.1|AV915488 AV915488 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags14m01 5', mRNA sequence
Length = 656
Score = 26.6 bits (52), Expect(2) = 4.1
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = +1 / +2
Query: 769 RCSNTIGGFQCTCPAGM 819
+C NT G ++C C G+
Sbjct: 161 KCKNTWGSYECGCGGGL 211
Score = 23.0 bits (44), Expect(2) = 4.1
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = +1 / +2
Query: 712 GPNGCTDINECITRNPC 762
G + C D++EC R C
Sbjct: 95 GVHKCIDVDECKERTAC 145
>gb|BQ458534.1|BQ458534 HA04P01r HA Hordeum vulgare subsp. vulgare cDNA clone HA04P01
5-PRIME, mRNA sequence
Length = 572
Score = 27.1 bits (53), Expect(2) = 4.1
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +1 / -2
Query: 571 VNGSSCEEAKLSGSYACAENAYCYNSSNGIGYRCNCSSGFEG 696
++GSS + LSGS +C + C +SS+ SS G
Sbjct: 316 LSGSSSSGSSLSGSSSCGSS*GCASSSSSSSSSSRGSSAGNG 191
Score = 24.8 bits (48), Expect(2) = 4.1
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +1 / -3
Query: 172 TANSSVNLEGTVFTFSDTRNKFTALGC 252
++NS+ +LEG + T +K T L C
Sbjct: 393 SSNSTYSLEGYFYLPQATSSKITQLAC 313
>gb|CB884166.1|CB884166 HF17L03r HF Hordeum vulgare subsp. vulgare cDNA clone HF17L03
5-PRIME, mRNA sequence
Length = 599
Score = 24.8 bits (48), Expect(2) = 4.1
Identities = 11/39 (28%), Positives = 14/39 (35%)
Frame = +1 / -3
Query: 742 CITRNPCTNRCSNTIGGFQCTCPAGMSGDGLKEGSGCNG 858
C + C + G C G G+G G GC G
Sbjct: 159 CCDKKKCCSPNGGCCGNGFCCQNGGCCGNGCCGGKGCCG 43
Score = 24.8 bits (48), Expect(2) = 4.1
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = +1 / -3
Query: 634 YCYNSSNGIGYRCNCSSG 687
YC S + Y C C SG
Sbjct: 237 YCICSCRSVWYSCPCGSG 184
>gb|AV913347.1|AV913347 AV913347 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags21m01 5', mRNA sequence
Length = 617
Score = 26.6 bits (52), Expect(2) = 4.2
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +2 / +1
Query: 584 AVKRRNCPDHTPAQRMPTATTH 649
A +RR C H+PA+ P ++H
Sbjct: 73 ARRRRRCGRHSPAEPSPRRSSH 138
Score = 25.3 bits (49), Expect(2) = 4.2
Identities = 11/31 (35%), Positives = 13/31 (41%)
Frame = +1 / +3
Query: 715 PNGCTDINECITRNPCTNRCSNTIGGFQCTC 807
P C D C NP T RC + + TC
Sbjct: 336 PWKCCDKPTCTKSNPPTCRCGDEVDKCAPTC 428
>gb|BI779588.2|BI779588 EBro01_SQ004_I03_R root, 3 week, hydroponic grown, no treatment, cv
Optic, EBro01 Hordeum vulgare subsp. vulgare cDNA clone
EBro01_SQ004_I03 5', mRNA sequence
Length = 453
Score = 26.6 bits (52), Expect(2) = 4.2
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +1 / -3
Query: 550 HVVLEWSVNGSSCEEAKLSGSYACAE 627
H LEW ++ CEE L+ ++ A+
Sbjct: 79 HNPLEWYLSDFDCEETPLASNFGMAQ 2
Score = 24.8 bits (48), Expect(2) = 4.2
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = +2 / -3
Query: 278 AARGIAVAVLPFALVEITSSTAHALGWLAA 367
AARG A+LP LV T+ LAA
Sbjct: 211 AARGRTTALLPDTLVSFTTEVEVGAATLAA 122
>gb|BM370751.2|BM370751 EBro04_SQ002_B15_R root, 3 week, salt-stressed, cv Optic, EBro04
Hordeum vulgare subsp. vulgare cDNA clone
EBro04_SQ002_B15 5', mRNA sequence
Length = 653
Score = 26.6 bits (52), Expect(2) = 4.4
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +2 / +1
Query: 584 AVKRRNCPDHTPAQRMPTATTH 649
A +RR C H+PA+ P ++H
Sbjct: 52 ARRRRRCGRHSPAEPSPRRSSH 117
Score = 25.3 bits (49), Expect(2) = 4.4
Identities = 11/31 (35%), Positives = 13/31 (41%)
Frame = +1 / +2
Query: 715 PNGCTDINECITRNPCTNRCSNTIGGFQCTC 807
P C D C NP T RC + + TC
Sbjct: 314 PWKCCDKPTCTKSNPPTCRCGDEVDKCAPTC 406
>gb|BI778440.2|BI778440 EBro07_SQ003_F01_R root, 3 week, reduced light, cv Optic, EBro07
Hordeum vulgare subsp. vulgare cDNA clone
EBro07_SQ003_F01 5', mRNA sequence
Length = 659
Score = 26.6 bits (52), Expect(2) = 4.4
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +2 / +1
Query: 584 AVKRRNCPDHTPAQRMPTATTH 649
A +RR C H+PA+ P ++H
Sbjct: 52 ARRRRRCGRHSPAEPSPRRSSH 117
Score = 25.3 bits (49), Expect(2) = 4.4
Identities = 11/31 (35%), Positives = 13/31 (41%)
Frame = +1 / +2
Query: 715 PNGCTDINECITRNPCTNRCSNTIGGFQCTC 807
P C D C NP T RC + + TC
Sbjct: 314 PWKCCDKPTCTKSNPPTCRCGDEVDKCAPTC 406
>gb|BQ763893.1|BQ763893 EBro03_SQ005_N18_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ005_N18 5', mRNA sequence
Length = 667
Score = 26.6 bits (52), Expect(2) = 4.5
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +2 / +1
Query: 584 AVKRRNCPDHTPAQRMPTATTH 649
A +RR C H+PA+ P ++H
Sbjct: 82 ARRRRRCGRHSPAEPSPRRSSH 147
Score = 25.3 bits (49), Expect(2) = 4.5
Identities = 11/31 (35%), Positives = 13/31 (41%)
Frame = +1 / +2
Query: 715 PNGCTDINECITRNPCTNRCSNTIGGFQCTC 807
P C D C NP T RC + + TC
Sbjct: 344 PWKCCDKPTCTKSNPPTCRCGDEVDKCAPTC 436
>gb|BM371175.2|BM371175 EBro04_SQ003_L11_R root, 3 week, salt-stressed, cv Optic, EBro04
Hordeum vulgare subsp. vulgare cDNA clone
EBro04_SQ003_L11 5', mRNA sequence
Length = 674
Score = 26.6 bits (52), Expect(2) = 4.5
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +2 / +1
Query: 584 AVKRRNCPDHTPAQRMPTATTH 649
A +RR C H+PA+ P ++H
Sbjct: 52 ARRRRRCGRHSPAEPSPRRSSH 117
Score = 25.3 bits (49), Expect(2) = 4.5
Identities = 11/31 (35%), Positives = 13/31 (41%)
Frame = +1 / +2
Query: 715 PNGCTDINECITRNPCTNRCSNTIGGFQCTC 807
P C D C NP T RC + + TC
Sbjct: 314 PWKCCDKPTCTKSNPPTCRCGDEVDKCAPTC 406
>gb|AL500990.1|AL500990 AL500990 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW02K11u 3', mRNA sequence
Length = 537
Score = 32.1 bits (64), Expect = 4.7
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = -1 / -2
Query: 125 RPSSNEMSRIPSMLFPMDSNGPLCPHTTLNPRDREGLLP 9
RP+S+ SR P+ S P CP T+ +P G +P
Sbjct: 293 RPTSSASSRTPTSAPSTRSASPSCPRTSSSPAASAGSVP 177
>gb|AL500992.1|AL500992 AL500992 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW02K15u 3', mRNA sequence
Length = 548
Score = 32.1 bits (64), Expect = 4.7
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = -1 / -1
Query: 125 RPSSNEMSRIPSMLFPMDSNGPLCPHTTLNPRDREGLLP 9
RP+S+ SR P+ S P CP T+ +P G +P
Sbjct: 293 RPTSSASSRTPTSAPSTRSASPSCPRTSSSPAASAGSVP 177
>gb|AL503571.1|AL503571 AL503571 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW02K11T 5', mRNA sequence
Length = 529
Score = 32.1 bits (64), Expect = 4.7
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = -1 / +2
Query: 125 RPSSNEMSRIPSMLFPMDSNGPLCPHTTLNPRDREGLLP 9
RP+S+ SR P+ S P CP T+ +P G +P
Sbjct: 359 RPTSSASSRTPTSAPSTRSASPSCPRTSSSPAASAGSVP 475
>gb|BE194998.2|BE194998 HVSMEh0088A10f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0088A10f, mRNA sequence
Length = 588
Score = 32.1 bits (64), Expect = 4.7
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -1 / +3
Query: 374 GAWQQATPEHEPSMMLFPLEQKEAQP 297
GAW++AT M++ PLEQ EA P
Sbjct: 450 GAWRRATSAGWAGMVVHPLEQAEALP 527
>gb|BG418863.1|BG418863 HVSMEk0024N07f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0024N07f, mRNA sequence
Length = 816
Score = 32.1 bits (64), Expect = 4.7
Identities = 15/43 (34%), Positives = 19/43 (44%)
Frame = -3 / -3
Query: 174 RPSYALLRTSTSQYAHKTIKQRDVKNPKHAVSDGQQRTTVSTH 46
RPS L T+T H T + V NP H T++TH
Sbjct: 616 RPSRTTLSTNTPPSQHSTRTKHLVTNPTHISPPHTTNNTINTH 488
>gb|BF626903.3|BF626903 HVSMEb0001K11f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0001K11f, mRNA sequence
Length = 554
Score = 32.1 bits (64), Expect = 4.7
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = -1 / +3
Query: 125 RPSSNEMSRIPSMLFPMDSNGPLCPHTTLNPRDREGLLP 9
RP+S+ SR P+ S P CP T+ +P G +P
Sbjct: 264 RPTSSASSRTPTSAPSTRSASPSCPRTSSSPAASAGSVP 380
>gb|BF064963.3|BF064963 HV_CEb0022D03f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0022D03f, mRNA sequence
Length = 690
Score = 32.1 bits (64), Expect = 4.7
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +3 / +3
Query: 816 DERRRPQGRKWLQWSKHTSDCNSCR 890
DE RR QGR W W C CR
Sbjct: 3 DEERRRQGRGWALWPLGPGLCRPCR 77
>gb|AV917280.1|AV917280 AV917280 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags18e03 5', mRNA sequence
Length = 680
Score = 32.1 bits (64), Expect = 4.7
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = -2 / +3
Query: 532 CRLCCSDQELKTHMNPAPRRRPDHMASNRNRCRCW 428
CR C + +T + APR RP R RCW
Sbjct: 174 CRAPCRTRPRRTSSSTAPRTRPPRTP*AARRGRCW 278
>gb|AV932172.1|AV932172 AV932172 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal2j05 5', mRNA sequence
Length = 499
Score = 32.1 bits (64), Expect = 4.7
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +3 / -3
Query: 819 ERRRPQGRKWLQWSKHTSDCNSCRISSASASP 914
+RRR WS+HTS +S R+ +SP
Sbjct: 302 DRRRRPAASMCSWSRHTSPTHSSRVCHRQSSP 207
>gb|BJ469356.1|BJ469356 BJ469356 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal20h24 5', mRNA sequence
Length = 484
Score = 32.1 bits (64), Expect = 4.7
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +3 / -3
Query: 819 ERRRPQGRKWLQWSKHTSDCNSCRISSASASP 914
+RRR WS+HTS +S R+ +SP
Sbjct: 251 DRRRRPAASMCSWSRHTSPTHSSRVCHRQSSP 156
>gb|BJ472753.1|BJ472753 BJ472753 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal36l08 5', mRNA sequence
Length = 571
Score = 32.1 bits (64), Expect = 4.7
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +3 / -2
Query: 819 ERRRPQGRKWLQWSKHTSDCNSCRISSASASP 914
+RRR WS+HTS +S R+ +SP
Sbjct: 327 DRRRRPAASMCSWSRHTSPTHSSRVCHRQSSP 232
>gb|BQ459120.1|BQ459120 HA02E07r HA Hordeum vulgare subsp. vulgare cDNA clone HA02E07
5-PRIME, mRNA sequence
Length = 552
Score = 32.1 bits (64), Expect = 4.7
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = -1 / +1
Query: 125 RPSSNEMSRIPSMLFPMDSNGPLCPHTTLNPRDREGLLP 9
RP+S+ SR P+ S P CP T+ +P G +P
Sbjct: 313 RPTSSASSRTPTSAPSTRSASPSCPRTSSSPAASAGSVP 429
>gb|BQ471063.1|BQ471063 HX04N17r HX Hordeum vulgare subsp. vulgare cDNA clone HX04N17
5-PRIME, mRNA sequence
Length = 600
Score = 32.1 bits (64), Expect = 4.7
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = -1 / +3
Query: 125 RPSSNEMSRIPSMLFPMDSNGPLCPHTTLNPRDREGLLP 9
RP+S+ SR P+ S P CP T+ +P G +P
Sbjct: 348 RPTSSASSRTPTSAPSTRSASPSCPRTSSSPAASAGSVP 464
>gb|BQ656762.1|BQ656762 HA02E07u HA Hordeum vulgare subsp. vulgare cDNA clone HA02E07
3-PRIME, mRNA sequence
Length = 517
Score = 32.1 bits (64), Expect = 4.7
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = -1 / -2
Query: 125 RPSSNEMSRIPSMLFPMDSNGPLCPHTTLNPRDREGLLP 9
RP+S+ SR P+ S P CP T+ +P G +P
Sbjct: 267 RPTSSASSRTPTSAPSTRSASPSCPRTSSSPAASAGSVP 151
>gb|BQ657492.1|BQ657492 HA08C11u HA Hordeum vulgare subsp. vulgare cDNA clone HA08C11
3-PRIME, mRNA sequence
Length = 505
Score = 32.1 bits (64), Expect = 4.7
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -1 / -1
Query: 125 RPSSNEMSRIPSMLFPMDSNGPLCPHTTLNPRDREGLLP 9
RP+S+ SR P+ S P CP T+ +P G P
Sbjct: 271 RPTSSASSRTPTFAPSTPSASPSCPRTSSSPAASAGSAP 155
>gb|BQ657576.1|BQ657576 HA07N03u HA Hordeum vulgare subsp. vulgare cDNA clone HA07N03
3-PRIME, mRNA sequence
Length = 438
Score = 32.1 bits (64), Expect = 4.7
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -1 / -3
Query: 125 RPSSNEMSRIPSMLFPMDSNGPLCPHTTLNPRDREGLLP 9
RP+S+ SR P+ S P CP T+ +P G P
Sbjct: 271 RPTSSASSRTPTFAPSTPSASPSCPRTSSSPAASAGSAP 155
>gb|BQ765131.1|BQ765131 EBca01_SQ005_K20_R carpel, pre-anthesis, no treatment, cv Optic,
EBca01 Hordeum vulgare subsp. vulgare cDNA clone
EBca01_SQ005_K20 5', mRNA sequence
Length = 594
Score = 32.1 bits (64), Expect = 4.7
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = -2 / +1
Query: 532 CRLCCSDQELKTHMNPAPRRRPDHMASNRNRCRCW 428
CR C + +T + APR RP R RCW
Sbjct: 91 CRAPCRTRPRRTSSSTAPRTRPPRTP*AARRGRCW 195
>gb|BU976128.1|BU976128 HA03D01u HA Hordeum vulgare subsp. vulgare cDNA clone HA03D01
3-PRIME, mRNA sequence
Length = 529
Score = 32.1 bits (64), Expect = 4.7
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -1 / -2
Query: 125 RPSSNEMSRIPSMLFPMDSNGPLCPHTTLNPRDREGLLP 9
RP+S+ SR P+ S P CP T+ +P G P
Sbjct: 279 RPTSSASSRTPTFAPSTPSASPSCPRTSSSPAASAGSAP 163
>gb|BU976360.1|BU976360 HA03J09u HA Hordeum vulgare subsp. vulgare cDNA clone HA03J09
3-PRIME, mRNA sequence
Length = 511
Score = 32.1 bits (64), Expect = 4.7
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -1 / -2
Query: 125 RPSSNEMSRIPSMLFPMDSNGPLCPHTTLNPRDREGLLP 9
RP+S+ SR P+ S P CP T+ +P G P
Sbjct: 279 RPTSSASSRTPTFAPSTPSASPSCPRTSSSPAASAGSAP 163
>gb|BU976432.1|BU976432 HA03L05r HA Hordeum vulgare subsp. vulgare cDNA clone HA03L05
5-PRIME, mRNA sequence
Length = 571
Score = 32.1 bits (64), Expect = 4.7
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = -1 / +1
Query: 125 RPSSNEMSRIPSMLFPMDSNGPLCPHTTLNPRDREGLLP 9
RP+S+ SR P+ S P CP T+ +P G +P
Sbjct: 319 RPTSSASSRTPTSAPSTRSASPSCPRTSSSPAASAGSVP 435
>gb|BU982752.1|BU982752 HA27I01r HA Hordeum vulgare subsp. vulgare cDNA clone HA27I01
5-PRIME, mRNA sequence
Length = 465
Score = 32.1 bits (64), Expect = 4.7
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = -1 / +1
Query: 125 RPSSNEMSRIPSMLFPMDSNGPLCPHTTLNPRDREGLLP 9
RP+S+ SR P+ S P CP T+ +P G +P
Sbjct: 349 RPTSSASSRTPTSAPSTRSASPSCPRTSSSPAASAGSVP 465
>gb|CA015807.1|CA015807 HV11P13u HV Hordeum vulgare subsp. vulgare cDNA clone HV11P13
3-PRIME, mRNA sequence
Length = 464
Score = 32.1 bits (64), Expect = 4.7
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = -1 / -2
Query: 125 RPSSNEMSRIPSMLFPMDSNGPLCPHTTLNPRDREGLLP 9
RP+S+ SR P+ S P CP T+ +P G +P
Sbjct: 274 RPTSSASSRTPTSAPSTRSASPSCPRTSSSPAASAGSVP 158
>gb|CA019431.1|CA019431 HV11P13r HV Hordeum vulgare subsp. vulgare cDNA clone HV11P13
5-PRIME, mRNA sequence
Length = 630
Score = 32.1 bits (64), Expect = 4.7
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = -1 / +3
Query: 125 RPSSNEMSRIPSMLFPMDSNGPLCPHTTLNPRDREGLLP 9
RP+S+ SR P+ S P CP T+ +P G +P
Sbjct: 357 RPTSSASSRTPTSAPSTRSASPSCPRTSSSPAASAGSVP 473
>gb|CA020832.1|CA020832 HZ37P12r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ37P12
5-PRIME, mRNA sequence
Length = 600
Score = 32.1 bits (64), Expect = 4.7
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +3 / -2
Query: 819 ERRRPQGRKWLQWSKHTSDCNSCRISSASASP 914
+RRR WS+HTS +S R+ +SP
Sbjct: 560 DRRRRPAASMCSWSRHTSPTHSSRVCHRQSSP 465
>gb|CA022087.1|CA022087 HZ42C03r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ42C03
5-PRIME, mRNA sequence
Length = 687
Score = 32.1 bits (64), Expect = 4.7
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = -2 / +3
Query: 532 CRLCCSDQELKTHMNPAPRRRPDHMASNRNRCRCW 428
CR C + +T + APR RP R RCW
Sbjct: 405 CRAPCRTRPRRTSSSTAPRTRPPRTP*AARRGRCW 509
>gb|CA022534.1|CA022534 HZ43I10r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ43I10
5-PRIME, mRNA sequence
Length = 498
Score = 32.1 bits (64), Expect = 4.7
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = -2 / +1
Query: 532 CRLCCSDQELKTHMNPAPRRRPDHMASNRNRCRCW 428
CR C + +T + APR RP R RCW
Sbjct: 352 CRAPCRTRPRRTSSSTAPRTRPPRTP*AARRGRCW 456
>gb|CA022741.1|CA022741 HZ44D16r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ44D16
5-PRIME, mRNA sequence
Length = 583
Score = 32.1 bits (64), Expect = 4.7
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = -2 / +1
Query: 532 CRLCCSDQELKTHMNPAPRRRPDHMASNRNRCRCW 428
CR C + +T + APR RP R RCW
Sbjct: 301 CRAPCRTRPRRTSSSTAPRTRPPRTP*AARRGRCW 405
>gb|CA024330.1|CA024330 HZ49A05r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ49A05
5-PRIME, mRNA sequence
Length = 637
Score = 32.1 bits (64), Expect = 4.7
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = -1 / +2
Query: 125 RPSSNEMSRIPSMLFPMDSNGPLCPHTTLNPRDREGLLP 9
RP+S+ SR P+ S P CP T+ +P G +P
Sbjct: 371 RPTSSASSRTPTSAPSTRSASPSCPRTSSSPAASAGSVP 487
>gb|CA024489.1|CA024489 HZ49H06r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ49H06
5-PRIME, mRNA sequence
Length = 520
Score = 32.1 bits (64), Expect = 4.7
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = -2 / +3
Query: 532 CRLCCSDQELKTHMNPAPRRRPDHMASNRNRCRCW 428
CR C + +T + APR RP R RCW
Sbjct: 207 CRAPCRTRPRRTSSSTAPRTRPPRTP*AARRGRCW 311
>gb|CA028257.1|CA028257 HZ61H06r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ61H06
5-PRIME, mRNA sequence
Length = 605
Score = 32.1 bits (64), Expect = 4.7
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = -2 / +1
Query: 532 CRLCCSDQELKTHMNPAPRRRPDHMASNRNRCRCW 428
CR C + +T + APR RP R RCW
Sbjct: 310 CRAPCRTRPRRTSSSTAPRTRPPRTP*AARRGRCW 414
>gb|CA032378.1|CA032378 HX12N13r HX Hordeum vulgare subsp. vulgare cDNA clone HX12N13
5-PRIME, mRNA sequence
Length = 630
Score = 32.1 bits (64), Expect = 4.7
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = -1 / +1
Query: 125 RPSSNEMSRIPSMLFPMDSNGPLCPHTTLNPRDREGLLP 9
RP+S+ SR P+ S P CP T+ +P G +P
Sbjct: 364 RPTSSASSRTPTSAPSTRSASPSCPRTSSSPAASAGSVP 480
>gb|CB876117.1|CB876117 HX10F10w HX Hordeum vulgare subsp. vulgare cDNA clone HX10F10
3-PRIME, mRNA sequence
Length = 553
Score = 32.1 bits (64), Expect = 4.7
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = -1 / -1
Query: 125 RPSSNEMSRIPSMLFPMDSNGPLCPHTTLNPRDREGLLP 9
RP+S+ SR P+ S P CP T+ +P G +P
Sbjct: 259 RPTSSASSRTPTSAPSTRSASPSCPRTSSSPAASAGSVP 143
>gb|BI955034.1|BI955034 HVSMEm0020O21f Hordeum vulgare green seedling EST library
HVcDNA0014 (Blumeria infected) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEm0020O21f, mRNA sequence
Length = 667
Score = 27.1 bits (53), Expect(2) = 4.8
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +1 / -3
Query: 571 VNGSSCEEAKLSGSYACAENAYCYNSSNGIGYRCNCSSGFEG 696
++GSS + LSGS +C + C +SS+ SS G
Sbjct: 428 LSGSSSSGSSLSGSSSCGSS*GCASSSSSSSSSSRGSSAGNG 303
Score = 24.8 bits (48), Expect(2) = 4.8
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +1 / -1
Query: 172 TANSSVNLEGTVFTFSDTRNKFTALGC 252
++NS+ +LEG + T +K T L C
Sbjct: 505 SSNSTYSLEGYFYLPQATSSKITQLAC 425
>gb|BJ453131.1|BJ453131 BJ453131 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak41m21 5', mRNA sequence
Length = 367
Score = 26.2 bits (51), Expect(2) = 4.8
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +1 / -2
Query: 571 VNGSSCEEAKLSGSYACAENAYCYNSSN 654
++GSS + LSGS +C + C +SS+
Sbjct: 132 LSGSSSSGSSLSGSSSCGSS*GCASSSS 49
Score = 24.8 bits (48), Expect(2) = 4.8
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +1 / -3
Query: 172 TANSSVNLEGTVFTFSDTRNKFTALGC 252
++NS+ +LEG + T +K T L C
Sbjct: 209 SSNSTYSLEGYFYLPQATSSKITQLAC 129
>gb|BM816025.1|BM816025 HC02H11_T3.ab1 HC Hordeum vulgare subsp. vulgare cDNA clone
HC02H11_T3.ab1 similar to Trypsin,, mRNA sequence
Length = 748
Score = 26.6 bits (52), Expect(2) = 5.0
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +2 / +2
Query: 584 AVKRRNCPDHTPAQRMPTATTH 649
A +RR C H+PA+ P ++H
Sbjct: 83 ARRRRRCGRHSPAEPSPRRSSH 148
Score = 25.3 bits (49), Expect(2) = 5.0
Identities = 11/31 (35%), Positives = 13/31 (41%)
Frame = +1 / +3
Query: 715 PNGCTDINECITRNPCTNRCSNTIGGFQCTC 807
P C D C NP T RC + + TC
Sbjct: 345 PWKCCDKPTCTKSNPPTCRCGDEVDKCAPTC 437
>gb|AL508192.1|AL508192 AL508192 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY08A19V 5',
mRNA sequence
Length = 700
Score = 32.1 bits (64), Expect = 5.1
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +1 / -3
Query: 280 STGYSGGCASFCSSGNNIIDGSCSGVAC 363
+TG GGC C + DG C G+ C
Sbjct: 458 ATGAGGGCGGGCVPFPQLGDGGCGGLVC 375
>gb|BF631311.2|BF631311 HVSMEb0015J07f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0015J07f, mRNA sequence
Length = 776
Score = 32.1 bits (64), Expect = 5.1
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +1 / -2
Query: 280 STGYSGGCASFCSSGNNIIDGSCSGVAC 363
+TG GGC C + DG C G+ C
Sbjct: 454 ATGAGGGCGGGCVPFPQLGDGGCGGLVC 371
>gb|BQ762969.1|BQ762969 EBro02_SQ006_P17_R root, 3 week, hydroponic grown, low nitrogen, cv
Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone
EBro02_SQ006_P17 5', mRNA sequence
Length = 646
Score = 32.1 bits (64), Expect = 5.1
Identities = 11/36 (30%), Positives = 17/36 (47%)
Frame = +1 / -2
Query: 745 ITRNPCTNRCSNTIGGFQCTCPAGMSGDGLKEGSGC 852
+ N C ++ T G TCP ++ G +G GC
Sbjct: 405 LVTNNCKHKSEMTAGSMVGTCPGAVANTGNSQGLGC 298
>gb|BU968801.1|BU968801 HB08K03r BC Hordeum vulgare subsp. vulgare cDNA clone HB08K03
5-PRIME, mRNA sequence
Length = 590
Score = 32.1 bits (64), Expect = 5.1
Identities = 11/36 (30%), Positives = 17/36 (47%)
Frame = +1 / -2
Query: 745 ITRNPCTNRCSNTIGGFQCTCPAGMSGDGLKEGSGC 852
+ N C ++ T G TCP ++ G +G GC
Sbjct: 151 LVTNNCKHKSEMTAGSMVGTCPGAVANTGNSQGLGC 44
>gb|CA021929.1|CA021929 HZ41J06r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ41J06
5-PRIME, mRNA sequence
Length = 481
Score = 32.1 bits (64), Expect = 5.1
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +1 / -1
Query: 280 STGYSGGCASFCSSGNNIIDGSCSGVAC 363
+TG GGC C + DG C G+ C
Sbjct: 478 ATGAGGGCGGGCVPFPQLGDGGCGGLVC 395
>gb|AY943294.1| Hordeum vulgare subsp. vulgare clone BAC 673I14, complete sequence
Length = 108608
Score = 31.2 bits (62), Expect(2) = 5.3
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +3 / -1
Query: 888 RISSASASPHPWLLDSLAW*EEETC 962
R ++A+A+ PW + AW +EETC
Sbjct: 11264 RAAAAAAADCPWR*EEAAWLQEETC 11190
Score = 27.1 bits (53), Expect(2) = 5.3
Identities = 10/27 (37%), Positives = 12/27 (44%)
Frame = +3 / -2
Query: 777 KHNRWFPVHVPSRDERRRPQGRKWLQW 857
KH H P + PQGR+ L W
Sbjct: 52360 KHGEQELAHAPGNGDSGAPQGRRNLDW 52280
>gb|BE196341.2|BE196341 HVSMEh0092A15f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0092A15f, mRNA sequence
Length = 987
Score = 24.8 bits (48), Expect(2) = 5.3
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = +1 / -1
Query: 634 YCYNSSNGIGYRCNCSSG 687
YC S + Y C C SG
Sbjct: 270 YCICSCRSVWYSCPCGSG 217
Score = 24.4 bits (47), Expect(2) = 5.3
Identities = 12/39 (30%), Positives = 14/39 (35%)
Frame = +1 / -1
Query: 742 CITRNPCTNRCSNTIGGFQCTCPAGMSGDGLKEGSGCNG 858
C R C + G C G G+G G GC G
Sbjct: 192 CCDRIGCCSPNGGCCGNGFCCQNGGCCGNGCCGGKGCCG 76
>gb|BE196525.3|BE196525 HVSMEh0092I17f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0092I17f, mRNA sequence
Length = 971
Score = 24.8 bits (48), Expect(2) = 5.4
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = +1 / -1
Query: 634 YCYNSSNGIGYRCNCSSG 687
YC S + Y C C SG
Sbjct: 416 YCICSCRSVWYSCPCGSG 363
Score = 24.4 bits (47), Expect(2) = 5.4
Identities = 12/39 (30%), Positives = 14/39 (35%)
Frame = +1 / -1
Query: 742 CITRNPCTNRCSNTIGGFQCTCPAGMSGDGLKEGSGCNG 858
C R C + G C G G+G G GC G
Sbjct: 338 CCDRIGCCSPNGGCCGNGFCCQNGGCCGNGCCGGKGCCG 222
>gb|BE454348.1|BE454348 HVSMEh0093M10f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0093M10f, mRNA sequence
Length = 959
Score = 24.8 bits (48), Expect(2) = 5.4
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = +1 / -3
Query: 634 YCYNSSNGIGYRCNCSSG 687
YC S + Y C C SG
Sbjct: 483 YCICSCRSVWYSCPCGSG 430
Score = 24.4 bits (47), Expect(2) = 5.4
Identities = 12/39 (30%), Positives = 14/39 (35%)
Frame = +1 / -3
Query: 742 CITRNPCTNRCSNTIGGFQCTCPAGMSGDGLKEGSGCNG 858
C R C + G C G G+G G GC G
Sbjct: 405 CCDRIGCCSPNGGCCGNGFCCQNGGCCGNGCCGGKGCCG 289
>gb|BE196262.2|BE196262 HVSMEh0091M24f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0091M24f, mRNA sequence
Length = 936
Score = 24.8 bits (48), Expect(2) = 5.4
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = +1 / -2
Query: 634 YCYNSSNGIGYRCNCSSG 687
YC S + Y C C SG
Sbjct: 419 YCICSCRSVWYSCPCGSG 366
Score = 24.4 bits (47), Expect(2) = 5.4
Identities = 12/39 (30%), Positives = 14/39 (35%)
Frame = +1 / -2
Query: 742 CITRNPCTNRCSNTIGGFQCTCPAGMSGDGLKEGSGCNG 858
C R C + G C G G+G G GC G
Sbjct: 341 CCDRIGCCSPNGGCCGNGFCCQNGGCCGNGCCGGKGCCG 225
>gb|BE195553.2|BE195553 HVSMEh0089G12f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0089G12f, mRNA sequence
Length = 931
Score = 24.8 bits (48), Expect(2) = 5.4
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = +1 / -2
Query: 634 YCYNSSNGIGYRCNCSSG 687
YC S + Y C C SG
Sbjct: 453 YCICSCRSVWYSCPCGSG 400
Score = 24.4 bits (47), Expect(2) = 5.4
Identities = 12/39 (30%), Positives = 14/39 (35%)
Frame = +1 / -2
Query: 742 CITRNPCTNRCSNTIGGFQCTCPAGMSGDGLKEGSGCNG 858
C R C + G C G G+G G GC G
Sbjct: 375 CCDRIGCCSPNGGCCGNGFCCQNGGCCGNGCCGGKGCCG 259
>gb|BE195994.2|BE195994 HVSMEh0091B03f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0091B03f, mRNA sequence
Length = 921
Score = 24.8 bits (48), Expect(2) = 5.4
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = +1 / -3
Query: 634 YCYNSSNGIGYRCNCSSG 687
YC S + Y C C SG
Sbjct: 418 YCICSCTSVWYSCPCGSG 365
Score = 24.4 bits (47), Expect(2) = 5.4
Identities = 12/39 (30%), Positives = 14/39 (35%)
Frame = +1 / -3
Query: 742 CITRNPCTNRCSNTIGGFQCTCPAGMSGDGLKEGSGCNG 858
C R C + G C G G+G G GC G
Sbjct: 340 CCDRIGCCSPNGGCCGNGFCCQNGGCCGNGCCGGKGCCG 224
>gb|BE454737.2|BE454737 HVSMEh0095K06f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0095K06f, mRNA sequence
Length = 884
Score = 24.8 bits (48), Expect(2) = 5.4
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = +1 / -1
Query: 634 YCYNSSNGIGYRCNCSSG 687
YC S + Y C C SG
Sbjct: 371 YCICSCRSVWYSCPCGSG 318
Score = 24.4 bits (47), Expect(2) = 5.4
Identities = 12/39 (30%), Positives = 14/39 (35%)
Frame = +1 / -1
Query: 742 CITRNPCTNRCSNTIGGFQCTCPAGMSGDGLKEGSGCNG 858
C R C + G C G G+G G GC G
Sbjct: 293 CCDRIGCCSPNGGCCGNGFCCQNGGCCGNGCCGGKGCCG 177
>gb|BG367898.2|BG367898 HVSMEi0014H10f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0014H10f, mRNA sequence
Length = 883
Score = 24.8 bits (48), Expect(2) = 5.4
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = +1 / -1
Query: 634 YCYNSSNGIGYRCNCSSG 687
YC S + Y C C SG
Sbjct: 226 YCICSCRSVWYSCPCGSG 173
Score = 24.4 bits (47), Expect(2) = 5.4
Identities = 12/39 (30%), Positives = 14/39 (35%)
Frame = +1 / -1
Query: 742 CITRNPCTNRCSNTIGGFQCTCPAGMSGDGLKEGSGCNG 858
C R C + G C G G+G G GC G
Sbjct: 148 CCDRIGCCSPNGGCCGNGFCCQNGGCCGNGCCGGKGCCG 32
>gb|CA022964.1|CA022964 HZ44N18r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ44N18
5-PRIME, mRNA sequence
Length = 630
Score = 27.1 bits (53), Expect(2) = 5.4
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -2 / +2
Query: 517 SDQELKTHMNPAPRRR 470
SDQE HM PAP +R
Sbjct: 329 SDQEHMLHMRPAPEKR 376
Score = 24.4 bits (47), Expect(2) = 5.4
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -3 / +2
Query: 888 CNYCNH*CAYSIATTSFLEAV 826
CN+CN A S+ + S L V
Sbjct: 80 CNFCNTILAVSVPSNSMLNMV 142
>gb|BE195110.2|BE195110 HVSMEh0088F05f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0088F05f, mRNA sequence
Length = 814
Score = 24.8 bits (48), Expect(2) = 5.4
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = +1 / -2
Query: 634 YCYNSSNGIGYRCNCSSG 687
YC S + Y C C SG
Sbjct: 426 YCICSCRSVWYSCPCGSG 373
Score = 24.4 bits (47), Expect(2) = 5.4
Identities = 12/39 (30%), Positives = 14/39 (35%)
Frame = +1 / -2
Query: 742 CITRNPCTNRCSNTIGGFQCTCPAGMSGDGLKEGSGCNG 858
C R C + G C G G+G G GC G
Sbjct: 348 CCDRIGCCSPNGGCCGNGFCCQNGGCCGNGCCGGKGCCG 232
>gb|BE195429.3|BE195429 HVSMEh0089J20f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0089J20f, mRNA sequence
Length = 803
Score = 24.8 bits (48), Expect(2) = 5.4
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = +1 / -3
Query: 634 YCYNSSNGIGYRCNCSSG 687
YC S + Y C C SG
Sbjct: 426 YCICSCRSVWYSCPCGSG 373
Score = 24.4 bits (47), Expect(2) = 5.4
Identities = 12/39 (30%), Positives = 14/39 (35%)
Frame = +1 / -3
Query: 742 CITRNPCTNRCSNTIGGFQCTCPAGMSGDGLKEGSGCNG 858
C R C + G C G G+G G GC G
Sbjct: 348 CCDRIGCCSPNGGCCGNGFCCQNGGCCGNGCCGGKGCCG 232
>gb|BE602747.2|BE602747 HVSMEh0101I03f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0101I03f, mRNA sequence
Length = 719
Score = 24.8 bits (48), Expect(2) = 5.5
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = +1 / -1
Query: 634 YCYNSSNGIGYRCNCSSG 687
YC S + Y C C SG
Sbjct: 416 YCICSCRSVWYSCPCGSG 363
Score = 24.4 bits (47), Expect(2) = 5.5
Identities = 12/39 (30%), Positives = 14/39 (35%)
Frame = +1 / -1
Query: 742 CITRNPCTNRCSNTIGGFQCTCPAGMSGDGLKEGSGCNG 858
C R C + G C G G+G G GC G
Sbjct: 338 CCDRIGCCSPNGGCCGNGFCCQNGGCCGNGCCGGKGCCG 222
>gb|BE455072.2|BE455072 HVSMEh0096B10f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0096B10f, mRNA sequence
Length = 716
Score = 24.8 bits (48), Expect(2) = 5.5
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = +1 / -2
Query: 634 YCYNSSNGIGYRCNCSSG 687
YC S + Y C C SG
Sbjct: 418 YCICSCRSVWYSCPCGSG 365
Score = 24.4 bits (47), Expect(2) = 5.5
Identities = 12/39 (30%), Positives = 14/39 (35%)
Frame = +1 / -2
Query: 742 CITRNPCTNRCSNTIGGFQCTCPAGMSGDGLKEGSGCNG 858
C R C + G C G G+G G GC G
Sbjct: 340 CCDRIGCCSPNGGCCGNGFCCQNGGCCGNGCCGGKGCCG 224
>gb|BM097315.2|BM097315 EBro01_SQ004_M02_R root, 3 week, hydroponic grown, no treatment, cv
Optic, EBro01 Hordeum vulgare subsp. vulgare cDNA clone
EBro01_SQ004_M02 5', mRNA sequence
Length = 442
Score = 26.6 bits (52), Expect(2) = 5.5
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +2 / +1
Query: 584 AVKRRNCPDHTPAQRMPTATTH 649
A +RR C H+PA+ P ++H
Sbjct: 73 ARRRRRCGRHSPAEPSPRRSSH 138
Score = 24.4 bits (47), Expect(2) = 5.5
Identities = 11/31 (35%), Positives = 13/31 (41%)
Frame = +1 / +2
Query: 715 PNGCTDINECITRNPCTNRCSNTIGGFQCTC 807
P C D C NP T RC + + TC
Sbjct: 335 PWKCCDKPTCTKSNPPTCRCGDDVYKCAPTC 427
>gb|BE454781.3|BE454781 HVSMEh0095A21f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0095A21f, mRNA sequence
Length = 712
Score = 24.8 bits (48), Expect(2) = 5.5
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = +1 / -3
Query: 634 YCYNSSNGIGYRCNCSSG 687
YC S + Y C C SG
Sbjct: 413 YCICSCRSVWYSCPCGSG 360
Score = 24.4 bits (47), Expect(2) = 5.5
Identities = 12/39 (30%), Positives = 14/39 (35%)
Frame = +1 / -3
Query: 742 CITRNPCTNRCSNTIGGFQCTCPAGMSGDGLKEGSGCNG 858
C R C + G C G G+G G GC G
Sbjct: 335 CCDRIGCCSPNGGCCGNGFCCQNGGCCGNGCCGGKGCCG 219
>gb|AL506403.1|AL506403 AL506403 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY03A03T 5',
mRNA sequence
Length = 700
Score = 26.2 bits (51), Expect(2) = 5.5
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = +1 / +1
Query: 772 CSNTIGGFQCTCPAGM 819
C NT G ++C C G+
Sbjct: 487 CKNTWGSYECGCSGGL 534
Score = 23.0 bits (44), Expect(2) = 5.5
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +1 / +1
Query: 712 GPNGCTDINECITRNPC 762
G + C DI+EC R C
Sbjct: 418 GIHKCEDIDECKERTAC 468
>gb|BE602113.2|BE602113 HVSMEh0102I13f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0102I13f, mRNA sequence
Length = 659
Score = 24.8 bits (48), Expect(2) = 5.5
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = +1 / -3
Query: 634 YCYNSSNGIGYRCNCSSG 687
YC S + Y C C SG
Sbjct: 414 YCICSCRSVWYSCPCGSG 361
Score = 24.4 bits (47), Expect(2) = 5.5
Identities = 12/39 (30%), Positives = 14/39 (35%)
Frame = +1 / -3
Query: 742 CITRNPCTNRCSNTIGGFQCTCPAGMSGDGLKEGSGCNG 858
C R C + G C G G+G G GC G
Sbjct: 336 CCDRIGCCSPNGGCCGNGFCCQNGGCCGNGCCGGKGCCG 220
>gb|BE194831.2|BE194831 HVSMEh0087C04f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0087C04f, mRNA sequence
Length = 653
Score = 24.8 bits (48), Expect(2) = 5.5
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = +1 / -2
Query: 634 YCYNSSNGIGYRCNCSSG 687
YC S + Y C C SG
Sbjct: 391 YCICSCRSVWYSCPCGSG 338
Score = 24.4 bits (47), Expect(2) = 5.5
Identities = 12/39 (30%), Positives = 14/39 (35%)
Frame = +1 / -2
Query: 742 CITRNPCTNRCSNTIGGFQCTCPAGMSGDGLKEGSGCNG 858
C R C + G C G G+G G GC G
Sbjct: 313 CCDRIGCCSPNGGCCGNGFCCQNGGCCGNGCCGGKGCCG 197
>gb|BE194833.2|BE194833 HVSMEh0087C08f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0087C08f, mRNA sequence
Length = 654
Score = 24.8 bits (48), Expect(2) = 5.5
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = +1 / -3
Query: 634 YCYNSSNGIGYRCNCSSG 687
YC S + Y C C SG
Sbjct: 391 YCICSCRSVWYSCPCGSG 338
Score = 24.4 bits (47), Expect(2) = 5.5
Identities = 12/39 (30%), Positives = 14/39 (35%)
Frame = +1 / -3
Query: 742 CITRNPCTNRCSNTIGGFQCTCPAGMSGDGLKEGSGCNG 858
C R C + G C G G+G G GC G
Sbjct: 313 CCDRIGCCSPNGGCCGNGFCCQNGGCCGNGCCGGKGCCG 197
>gb|BE194149.3|BE194149 HVSMEh0084E16f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0084E16f, mRNA sequence
Length = 645
Score = 24.8 bits (48), Expect(2) = 5.5
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = +1 / -1
Query: 634 YCYNSSNGIGYRCNCSSG 687
YC S + Y C C SG
Sbjct: 426 YCICSCRSVWYSCPCGSG 373
Score = 24.4 bits (47), Expect(2) = 5.5
Identities = 12/39 (30%), Positives = 14/39 (35%)
Frame = +1 / -1
Query: 742 CITRNPCTNRCSNTIGGFQCTCPAGMSGDGLKEGSGCNG 858
C R C + G C G G+G G GC G
Sbjct: 348 CCDRIGCCSPNGGCCGNGFCCQNGGCCGNGCCGGKGCCG 232
>gb|CV058085.1|CV058085 BNEL34b6 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL34b6 5' similar to putative
vacuolar targeting receptor, mRNA sequence
Length = 624
Score = 26.2 bits (51), Expect(2) = 5.5
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = +1 / +2
Query: 772 CSNTIGGFQCTCPAGM 819
C NT G ++C C G+
Sbjct: 140 CKNTWGSYECGCSGGL 187
Score = 23.0 bits (44), Expect(2) = 5.5
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +1 / +2
Query: 712 GPNGCTDINECITRNPC 762
G + C DI+EC R C
Sbjct: 71 GIHKCEDIDECKERTAC 121
>gb|CV064337.1|CV064337 BNEL9G4 Barley EST endosperm library Hordeum vulgare subsp. vulgare
cDNA clone BNEL9G4 5' similar to putative vacuolar
targeting receptor, mRNA sequence
Length = 608
Score = 26.2 bits (51), Expect(2) = 5.5
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = +1 / +1
Query: 772 CSNTIGGFQCTCPAGM 819
C NT G ++C C G+
Sbjct: 142 CKNTWGSYECGCSGGL 189
Score = 23.0 bits (44), Expect(2) = 5.5
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +1 / +1
Query: 712 GPNGCTDINECITRNPC 762
G + C DI+EC R C
Sbjct: 73 GIHKCEDIDECKERTAC 123
>gb|BU985626.1|BU985626 HF08C10r HF Hordeum vulgare subsp. vulgare cDNA clone HF08C10
5-PRIME, mRNA sequence
Length = 646
Score = 27.1 bits (53), Expect(2) = 5.6
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -2 / +3
Query: 517 SDQELKTHMNPAPRRR 470
SDQE HM PAP +R
Sbjct: 309 SDQEHMLHMRPAPEKR 356
Score = 24.4 bits (47), Expect(2) = 5.6
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -3 / +3
Query: 888 CNYCNH*CAYSIATTSFLEAV 826
CN+CN A S+ + S L V
Sbjct: 60 CNFCNTILAVSVPSNSMLNMV 122
>gb|BI951223.1|BI951223 HVSMEl0025B19f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0025B19f, mRNA sequence
Length = 584
Score = 24.8 bits (48), Expect(2) = 5.6
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = +1 / -1
Query: 634 YCYNSSNGIGYRCNCSSG 687
YC S + Y C C SG
Sbjct: 209 YCICSCRSVWYSCPCGSG 156
Score = 24.4 bits (47), Expect(2) = 5.6
Identities = 12/39 (30%), Positives = 14/39 (35%)
Frame = +1 / -1
Query: 742 CITRNPCTNRCSNTIGGFQCTCPAGMSGDGLKEGSGCNG 858
C R C + G C G G+G G GC G
Sbjct: 131 CCDRIGCCSPNGGCCGNGFCCQNGGCCGNGCCGGKGCCG 15
>gb|CB884154.1|CB884154 HF06E04r HF Hordeum vulgare subsp. vulgare cDNA clone HF06E04
5-PRIME, mRNA sequence
Length = 582
Score = 24.8 bits (48), Expect(2) = 5.6
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = +1 / -1
Query: 634 YCYNSSNGIGYRCNCSSG 687
YC S + Y C C SG
Sbjct: 297 YCICSCRSVWYSCPCGSG 244
Score = 24.4 bits (47), Expect(2) = 5.6
Identities = 12/39 (30%), Positives = 14/39 (35%)
Frame = +1 / -1
Query: 742 CITRNPCTNRCSNTIGGFQCTCPAGMSGDGLKEGSGCNG 858
C R C + G C G G+G G GC G
Sbjct: 219 CCDRIGCCSPNGGCCGNGFCCQNGGCCGNGCCGGKGCCG 103
>gb|BU990606.1|BU990606 HF25I16r HF Hordeum vulgare subsp. vulgare cDNA clone HF25I16
5-PRIME, mRNA sequence
Length = 572
Score = 24.8 bits (48), Expect(2) = 5.6
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = +1 / -1
Query: 634 YCYNSSNGIGYRCNCSSG 687
YC S + Y C C SG
Sbjct: 416 YCICSCRSVWYSCPCGSG 363
Score = 24.4 bits (47), Expect(2) = 5.6
Identities = 12/39 (30%), Positives = 14/39 (35%)
Frame = +1 / -1
Query: 742 CITRNPCTNRCSNTIGGFQCTCPAGMSGDGLKEGSGCNG 858
C R C + G C G G+G G GC G
Sbjct: 338 CCDRIGCCSPNGGCCGNGFCCQNGGCCGNGCCGGKGCCG 222
>gb|CV053546.1|CV053546 BNEL100e2 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL100e2 5' similar to putative
vacuolar targeting receptor, mRNA sequence
Length = 570
Score = 26.2 bits (51), Expect(2) = 5.6
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = +1 / +2
Query: 772 CSNTIGGFQCTCPAGM 819
C NT G ++C C G+
Sbjct: 140 CKNTWGSYECGCSGGL 187
Score = 23.0 bits (44), Expect(2) = 5.6
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +1 / +2
Query: 712 GPNGCTDINECITRNPC 762
G + C DI+EC R C
Sbjct: 71 GIHKCEDIDECKERTAC 121
>gb|BU971853.1|BU971853 HB19N21r BC Hordeum vulgare subsp. vulgare cDNA clone HB19N21
5-PRIME, mRNA sequence
Length = 565
Score = 24.8 bits (48), Expect(2) = 5.6
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = +1 / -2
Query: 634 YCYNSSNGIGYRCNCSSG 687
YC S + Y C C SG
Sbjct: 417 YCICSCRSVWYSCPCGSG 364
Score = 24.4 bits (47), Expect(2) = 5.6
Identities = 12/39 (30%), Positives = 14/39 (35%)
Frame = +1 / -2
Query: 742 CITRNPCTNRCSNTIGGFQCTCPAGMSGDGLKEGSGCNG 858
C R C + G C G G+G G GC G
Sbjct: 339 CCDRIGCCSPNGGCCGNGFCCQNGGCCGNGCCGGKGCCG 223
>gb|BE602219.3|BE602219 HVSMEh0098B18f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0098B18f, mRNA sequence
Length = 561
Score = 24.8 bits (48), Expect(2) = 5.6
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = +1 / -3
Query: 634 YCYNSSNGIGYRCNCSSG 687
YC S + Y C C SG
Sbjct: 430 YCICSCKSVWYSCPCGSG 377
Score = 24.4 bits (47), Expect(2) = 5.6
Identities = 12/39 (30%), Positives = 14/39 (35%)
Frame = +1 / -3
Query: 742 CITRNPCTNRCSNTIGGFQCTCPAGMSGDGLKEGSGCNG 858
C R C + G C G G+G G GC G
Sbjct: 352 CCDRIGCCSPNGGCCGNGFCCQNGGCCGNGCFGGKGCCG 236
>gb|BQ472849.1|BQ472849 HB01E22r BC Hordeum vulgare subsp. vulgare cDNA clone HB01E22
5-PRIME, mRNA sequence
Length = 549
Score = 24.8 bits (48), Expect(2) = 5.6
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = +1 / -3
Query: 634 YCYNSSNGIGYRCNCSSG 687
YC S + Y C C SG
Sbjct: 409 YCICSCRSVWYSCPCGSG 356
Score = 24.4 bits (47), Expect(2) = 5.6
Identities = 12/39 (30%), Positives = 14/39 (35%)
Frame = +1 / -3
Query: 742 CITRNPCTNRCSNTIGGFQCTCPAGMSGDGLKEGSGCNG 858
C R C + G C G G+G G GC G
Sbjct: 331 CCDRIGCCSPNGGCCGNGFCCQNGGCCGNGCCGGKGCCG 215
>gb|CB859460.1|CB859460 HI10I06w HI Hordeum vulgare subsp. vulgare cDNA clone HI10I06
3-PRIME, mRNA sequence
Length = 543
Score = 26.2 bits (51), Expect(2) = 5.6
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = +1 / -1
Query: 772 CSNTIGGFQCTCPAGM 819
C NT G ++C C G+
Sbjct: 438 CKNTWGSYECGCSGGL 391
Score = 23.0 bits (44), Expect(2) = 5.6
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +1 / -1
Query: 712 GPNGCTDINECITRNPC 762
G + C DI+EC R C
Sbjct: 507 GIHKCEDIDECKERTAC 457
>gb|BG367755.2|BG367755 HVSMEi0013H20f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0013H20f, mRNA sequence
Length = 543
Score = 24.8 bits (48), Expect(2) = 5.6
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = +1 / -3
Query: 634 YCYNSSNGIGYRCNCSSG 687
YC S + Y C C SG
Sbjct: 244 YCICSCRSVWYSCPCGSG 191
Score = 24.4 bits (47), Expect(2) = 5.6
Identities = 12/39 (30%), Positives = 14/39 (35%)
Frame = +1 / -3
Query: 742 CITRNPCTNRCSNTIGGFQCTCPAGMSGDGLKEGSGCNG 858
C R C + G C G G+G G GC G
Sbjct: 166 CCDRIGCCSPNGGCCGNGFCCQNGGCCGNGCCGGKGCCG 50
>gb|BG368163.1|BG368163 HVSMEi0016B09f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0016B09f, mRNA sequence
Length = 536
Score = 24.8 bits (48), Expect(2) = 5.6
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = +1 / -2
Query: 634 YCYNSSNGIGYRCNCSSG 687
YC S + Y C C SG
Sbjct: 268 YCICSCKSVWYSCPCGSG 215
Score = 24.4 bits (47), Expect(2) = 5.6
Identities = 12/39 (30%), Positives = 14/39 (35%)
Frame = +1 / -2
Query: 742 CITRNPCTNRCSNTIGGFQCTCPAGMSGDGLKEGSGCNG 858
C R C + G C G G+G G GC G
Sbjct: 190 CCDRIGCCSPNGGCCGNGFCCQNGGCCGNGCCGGKGCCG 74
>gb|BU969002.1|BU969002 HB10D18r BC Hordeum vulgare subsp. vulgare cDNA clone HB10D18
5-PRIME, mRNA sequence
Length = 522
Score = 24.8 bits (48), Expect(2) = 5.6
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = +1 / -2
Query: 634 YCYNSSNGIGYRCNCSSG 687
YC S + Y C C SG
Sbjct: 416 YCICSCRSVWYSCPCGSG 363
Score = 24.4 bits (47), Expect(2) = 5.6
Identities = 12/39 (30%), Positives = 14/39 (35%)
Frame = +1 / -2
Query: 742 CITRNPCTNRCSNTIGGFQCTCPAGMSGDGLKEGSGCNG 858
C R C + G C G G+G G GC G
Sbjct: 338 CCDRIGCCSPNGGCCGNGFCCQNGGCCGNGCCGGKGCCG 222
>gb|BE602853.2|BE602853 HVSMEh0100D15f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0100D15f, mRNA sequence
Length = 511
Score = 24.8 bits (48), Expect(2) = 5.6
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = +1 / -3
Query: 634 YCYNSSNGIGYRCNCSSG 687
YC S + Y C C SG
Sbjct: 431 YCICSCKSVWYSCPCGSG 378
Score = 24.4 bits (47), Expect(2) = 5.6
Identities = 12/39 (30%), Positives = 14/39 (35%)
Frame = +1 / -3
Query: 742 CITRNPCTNRCSNTIGGFQCTCPAGMSGDGLKEGSGCNG 858
C R C + G C G G+G G GC G
Sbjct: 353 CCDRIGCCSPNGGCCGNGFCCQNGGCCGNGCCGGKGCCG 237
>gb|CA026297.1|CA026297 HZ55I03r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ55I03
5-PRIME, mRNA sequence
Length = 493
Score = 26.2 bits (51), Expect(2) = 5.6
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = +1 / +1
Query: 772 CSNTIGGFQCTCPAGM 819
C NT G ++C C G+
Sbjct: 382 CKNTWGSYECGCSGGL 429
Score = 23.0 bits (44), Expect(2) = 5.6
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +1 / +1
Query: 712 GPNGCTDINECITRNPC 762
G + C DI+EC R C
Sbjct: 313 GIHKCEDIDECKERTAC 363
>gb|BG366513.2|BG366513 HVSMEi0007F01f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0007F01f, mRNA sequence
Length = 478
Score = 24.8 bits (48), Expect(2) = 5.6
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = +1 / -3
Query: 634 YCYNSSNGIGYRCNCSSG 687
YC S + Y C C SG
Sbjct: 257 YCICSCRSVWYSCPCGSG 204
Score = 24.4 bits (47), Expect(2) = 5.6
Identities = 12/39 (30%), Positives = 14/39 (35%)
Frame = +1 / -3
Query: 742 CITRNPCTNRCSNTIGGFQCTCPAGMSGDGLKEGSGCNG 858
C R C + G C G G+G G GC G
Sbjct: 179 CCDRIGCCSPNGGCCGNGFCCQNGGCCGNGCCGGKGCCG 63
>gb|BU973702.1|BU973702 HB25L02r BC Hordeum vulgare subsp. vulgare cDNA clone HB25L02
5-PRIME, mRNA sequence
Length = 479
Score = 24.8 bits (48), Expect(2) = 5.6
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = +1 / -3
Query: 634 YCYNSSNGIGYRCNCSSG 687
YC S + Y C C SG
Sbjct: 405 YCICSCRSVWYSCPCGSG 352
Score = 24.4 bits (47), Expect(2) = 5.6
Identities = 12/39 (30%), Positives = 14/39 (35%)
Frame = +1 / -3
Query: 742 CITRNPCTNRCSNTIGGFQCTCPAGMSGDGLKEGSGCNG 858
C R C + G C G G+G G GC G
Sbjct: 327 CCDRIGCCSPNGGCCGNGFCCQNGGCCGNGCCGGKGCCG 211
>gb|BU974618.1|BU974618 HB28I15r BC Hordeum vulgare subsp. vulgare cDNA clone HB28I15
5-PRIME, mRNA sequence
Length = 476
Score = 24.8 bits (48), Expect(2) = 5.6
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = +1 / -2
Query: 634 YCYNSSNGIGYRCNCSSG 687
YC S + Y C C SG
Sbjct: 418 YCICSCRSVWYSCPCGSG 365
Score = 24.4 bits (47), Expect(2) = 5.6
Identities = 12/39 (30%), Positives = 14/39 (35%)
Frame = +1 / -2
Query: 742 CITRNPCTNRCSNTIGGFQCTCPAGMSGDGLKEGSGCNG 858
C R C + G C G G+G G GC G
Sbjct: 340 CCDRIGCCSPNGGCCGNGFCCQNGGCCGNGCCGGKGCCG 224
>gb|BU975264.1|BU975264 HB30J16r BC Hordeum vulgare subsp. vulgare cDNA clone HB30J16
5-PRIME, mRNA sequence
Length = 473
Score = 24.8 bits (48), Expect(2) = 5.6
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = +1 / -3
Query: 634 YCYNSSNGIGYRCNCSSG 687
YC S + Y C C SG
Sbjct: 417 YCICSCRSVWYSCPCGSG 364
Score = 24.4 bits (47), Expect(2) = 5.6
Identities = 12/39 (30%), Positives = 14/39 (35%)
Frame = +1 / -3
Query: 742 CITRNPCTNRCSNTIGGFQCTCPAGMSGDGLKEGSGCNG 858
C R C + G C G G+G G GC G
Sbjct: 339 CCDRIGCCSPNGGCCGNGFCCQNGGCCGNGCCGGKGCCG 223
>gb|BE455135.3|BE455135 HVSMEh0096F09f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0096F09f, mRNA sequence
Length = 837
Score = 24.8 bits (48), Expect(3) = 6.0
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = +1 / -3
Query: 634 YCYNSSNGIGYRCNCSSG 687
YC S + Y C C SG
Sbjct: 409 YCICSCKSVWYSCPCGSG 356
Score = 22.1 bits (42), Expect(3) = 6.0
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = +1 / -3
Query: 805 CPAGMSGDGLKEGSGCNG 858
C G G+G G GC G
Sbjct: 199 CGTGCCGNGCCGGKGCCG 146
Score = 22.1 bits (42), Expect(3) = 6.0
Identities = 7/13 (53%), Positives = 7/13 (53%)
Frame = +3 / -2
Query: 534 KTSIPTCCARVVC 572
K PTCC VC
Sbjct: 713 KEHCPTCCCCTVC 675
>gb|BF622926.2|BF622926 HVSMEa0012C08f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0012C08f, mRNA sequence
Length = 841
Score = 31.7 bits (63), Expect = 6.5
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -2 / -2
Query: 292 YTPCCHSKAWPPRYNP 245
Y P CH WP +YNP
Sbjct: 723 YLPRCHDNNWPSQYNP 676
>gb|BF629014.2|BF629014 HVSMEb0009I18f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0009I18f, mRNA sequence
Length = 831
Score = 31.7 bits (63), Expect = 6.5
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +2 / +3
Query: 8 LVRAPPCPVDLKLCVDTVVRCCPSETACLGFLTSRCL 118
+V + PCP+ +DT +RC S+ A LG L R L
Sbjct: 555 VVASLPCPIPK*TELDTRMRCS*SQAARLGLLPERLL 665
>gb|BI950950.1|BI950950 HVSMEl0023M12f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0023M12f, mRNA sequence
Length = 987
Score = 31.7 bits (63), Expect = 6.5
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = -2 / +2
Query: 499 THMNPAPRRRPDHMASNRNRCRCW 428
+H P++ P H A + RC CW
Sbjct: 56 SHGRQHPQQHPQHQAGSSQRCGCW 127
>gb|AW982609.3|AW982609 HVSMEg0003L19f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0003L19f, mRNA sequence
Length = 1027
Score = 31.7 bits (63), Expect = 6.5
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = -2 / +1
Query: 532 CRLCCSDQELKTHMNPAPRRRPDHMASNRNRCRCW 428
CR+ C + +T + APR RP R RCW
Sbjct: 106 CRVPCRTRPRRTSSSTAPRTRPLRTR*AARRGRCW 210
>gb|BQ458861.1|BQ458861 HA02P22r HA Hordeum vulgare subsp. vulgare cDNA clone HA02P22
5-PRIME, mRNA sequence
Length = 547
Score = 31.7 bits (63), Expect = 6.5
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -1 / +1
Query: 125 RPSSNEMSRIPSMLFPMDSNGPLCPHTTLNPRDREGLLP 9
RP+S+ SR P+ S P CP T+ +P G P
Sbjct: 358 RPTSSASSRTPTSAPSTPSASPSCPRTSSSPAASAGSAP 474
>gb|BQ462575.1|BQ462575 HI01F10T HI Hordeum vulgare subsp. vulgare cDNA clone HI01F10
5-PRIME, mRNA sequence
Length = 539
Score = 31.7 bits (63), Expect = 6.5
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +3 / -3
Query: 828 RPQGRKWLQWSKHTSDCNS 884
R +GR WL W SDCNS
Sbjct: 321 RTRGRSWLWWLACNSDCNS 265
>gb|BQ466164.1|BQ466164 HT01M04T HT Hordeum vulgare subsp. vulgare cDNA clone HT01M04
5-PRIME, mRNA sequence
Length = 699
Score = 31.7 bits (63), Expect = 6.5
Identities = 16/53 (30%), Positives = 22/53 (41%)
Frame = -1 / -2
Query: 404 KSSFFSPLGTGAWQQATPEHEPSMMLFPLEQKEAQPPLYPVLPFKSMATTLQP 246
++ F S +W T P M+L PLE PP V+P + L P
Sbjct: 224 RNFFTSTKLMSSWAHVTDAMHPGMVLLPLEPNLQLPPGREVIPKEGCVHKLPP 66
>gb|BQ656579.1|BQ656579 HA02P22u HA Hordeum vulgare subsp. vulgare cDNA clone HA02P22
3-PRIME, mRNA sequence
Length = 450
Score = 31.7 bits (63), Expect = 6.5
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -1 / -1
Query: 125 RPSSNEMSRIPSMLFPMDSNGPLCPHTTLNPRDREGLLP 9
RP+S+ SR P+ S P CP T+ +P G P
Sbjct: 279 RPTSSASSRTPTSAPSTPSASPSCPRTSSSPAASAGSAP 163
>gb|BI776316.2|BI776316 EBem04_SQ001_J03_R embryo, 12 DPA, no treatment, cv Optic, EBem04
Hordeum vulgare subsp. vulgare cDNA clone
EBem04_SQ001_J03 5', mRNA sequence
Length = 603
Score = 31.7 bits (63), Expect = 6.5
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -1 / +3
Query: 125 RPSSNEMSRIPSMLFPMDSNGPLCPHTTLNPRDREGLLP 9
RP+S+ SR P+ S P CP T+ +P G P
Sbjct: 333 RPTSSASSRTPTCAPSTPSASPSCPRTSSSPAASAGSAP 449
>gb|BM097537.2|BM097537 EBem04_SQ001_O12_R embryo, 12 DPA, no treatment, cv Optic, EBem04
Hordeum vulgare subsp. vulgare cDNA clone
EBem04_SQ001_O12 5', mRNA sequence
Length = 507
Score = 31.7 bits (63), Expect = 6.5
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -1 / +1
Query: 125 RPSSNEMSRIPSMLFPMDSNGPLCPHTTLNPRDREGLLP 9
RP+S+ SR P+ S P CP T+ +P G P
Sbjct: 301 RPTSSASSRTPTSAPSTPSASPSCPRTSSSPAASAGSAP 417
>gb|BM377863.2|BM377863 EBem04_SQ004_G15_R embryo, 12 DPA, no treatment, cv Optic, EBem04
Hordeum vulgare subsp. vulgare cDNA clone
EBem04_SQ004_G15 5', mRNA sequence
Length = 520
Score = 31.7 bits (63), Expect = 6.5
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -1 / +3
Query: 125 RPSSNEMSRIPSMLFPMDSNGPLCPHTTLNPRDREGLLP 9
RP+S+ SR P+ S P CP T+ +P G P
Sbjct: 351 RPTSSASSRTPTSAPSTPSASPSCPRTSSSPAASAGSAP 467
>gb|BM376783.2|BM376783 EBem05_SQ003_D15_R embryo, 14 DPA, no treatment, cv Optic, EBem05
Hordeum vulgare subsp. vulgare cDNA clone
EBem05_SQ003_D15 5', mRNA sequence
Length = 302
Score = 31.7 bits (63), Expect = 6.5
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -1 / +3
Query: 125 RPSSNEMSRIPSMLFPMDSNGPLCPHTTLNPRDREGLLP 9
RP+S+ SR P+ S P CP T+ +P G P
Sbjct: 111 RPTSSASSRTPTSAPSTPSASPSCPRTSSSPAASAGSAP 227
>gb|BM099252.2|BM099252 EBes01_SQ002_L02_R embryo sac, 4-6 DPA, no treatment, cv Optic,
EBes01 Hordeum vulgare subsp. vulgare cDNA clone
EBes01_SQ002_L02 5', mRNA sequence
Length = 572
Score = 31.7 bits (63), Expect = 6.5
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -1 / +3
Query: 125 RPSSNEMSRIPSMLFPMDSNGPLCPHTTLNPRDREGLLP 9
RP+S+ SR P+ S P CP T+ +P G P
Sbjct: 336 RPTSSASSRTPTCAPSTPSASPSCPRTSSSPAASAGSAP 452
>gb|BI776611.2|BI776611 EBpi07_SQ001_C06_R pistil, 12 DPA, no treatment, cv Optic, EBpi07
Hordeum vulgare subsp. vulgare cDNA clone
EBpi07_SQ001_C06 5', mRNA sequence
Length = 513
Score = 31.7 bits (63), Expect = 6.5
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -1 / +1
Query: 125 RPSSNEMSRIPSMLFPMDSNGPLCPHTTLNPRDREGLLP 9
RP+S+ SR P+ S P CP T+ +P G P
Sbjct: 346 RPTSSASSRTPTSAPSTPSASPSCPRTSSSPAASAGSAP 462
>gb|BI778047.2|BI778047 EBro07_SQ002_B06_R root, 3 week, reduced light, cv Optic, EBro07
Hordeum vulgare subsp. vulgare cDNA clone
EBro07_SQ002_B06 5', mRNA sequence
Length = 606
Score = 31.7 bits (63), Expect = 6.5
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -1 / +3
Query: 125 RPSSNEMSRIPSMLFPMDSNGPLCPHTTLNPRDREGLLP 9
RP+S+ SR P+ S P CP T+ +P G P
Sbjct: 327 RPTSSASSRTPTCAPSTPSASPSCPRTSSSPAASAGSAP 443
>gb|BI778338.2|BI778338 EBro07_SQ003_A03_R root, 3 week, reduced light, cv Optic, EBro07
Hordeum vulgare subsp. vulgare cDNA clone
EBro07_SQ003_A03 5', mRNA sequence
Length = 625
Score = 31.7 bits (63), Expect = 6.5
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -1 / +3
Query: 125 RPSSNEMSRIPSMLFPMDSNGPLCPHTTLNPRDREGLLP 9
RP+S+ SR P+ S P CP T+ +P G P
Sbjct: 345 RPTSSASSRTPTSAPSTPSASPSCPRTSSSPAASAGSAP 461
>gb|BU976127.1|BU976127 HA03D01r HA Hordeum vulgare subsp. vulgare cDNA clone HA03D01
5-PRIME, mRNA sequence
Length = 560
Score = 31.7 bits (63), Expect = 6.5
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -1 / +2
Query: 125 RPSSNEMSRIPSMLFPMDSNGPLCPHTTLNPRDREGLLP 9
RP+S+ SR P+ S P CP T+ +P G P
Sbjct: 371 RPTSSASSRTPTSAPSTPSASPSCPRTSSSPAASAGSAP 487
>gb|BU976359.1|BU976359 HA03J09r HA Hordeum vulgare subsp. vulgare cDNA clone HA03J09
5-PRIME, mRNA sequence
Length = 544
Score = 31.7 bits (63), Expect = 6.5
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -1 / +2
Query: 125 RPSSNEMSRIPSMLFPMDSNGPLCPHTTLNPRDREGLLP 9
RP+S+ SR P+ S P CP T+ +P G P
Sbjct: 359 RPTSSASSRTPTSAPSTPSASPSCPRTSSSPAASAGSAP 475
>gb|BU978828.1|BU978828 HA14G08r HA Hordeum vulgare subsp. vulgare cDNA clone HA14G08
5-PRIME, mRNA sequence
Length = 484
Score = 31.7 bits (63), Expect = 6.5
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -1 / +2
Query: 125 RPSSNEMSRIPSMLFPMDSNGPLCPHTTLNPRDREGLLP 9
RP+S+ SR P+ S P CP T+ +P G P
Sbjct: 359 RPTSSASSRTPTSAPSTPSASPSCPRTSSSPAASAGSAP 475
>gb|BU980909.1|BU980909 HA22B01r HA Hordeum vulgare subsp. vulgare cDNA clone HA22B01
5-PRIME, mRNA sequence
Length = 500
Score = 31.7 bits (63), Expect = 6.5
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -1 / +3
Query: 125 RPSSNEMSRIPSMLFPMDSNGPLCPHTTLNPRDREGLLP 9
RP+S+ SR P+ S P CP T+ +P G P
Sbjct: 369 RPTSSASSRTPTSAPSTPSASPSCPRTSSSPAASAGSAP 485
>gb|BU989613.1|BU989613 HF22D12r HF Hordeum vulgare subsp. vulgare cDNA clone HF22D12
5-PRIME, mRNA sequence
Length = 559
Score = 31.7 bits (63), Expect = 6.5
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -2 / -1
Query: 298 HRYTPCCHSKAWPPRYNP 245
+R+TP CHS WP Y P
Sbjct: 238 NRWTPMCHSTVWPMFYVP 185
>gb|BU989750.1|BU989750 HF22J15r HF Hordeum vulgare subsp. vulgare cDNA clone HF22J15
5-PRIME, mRNA sequence
Length = 554
Score = 31.7 bits (63), Expect = 6.5
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -2 / -2
Query: 298 HRYTPCCHSKAWPPRYNP 245
+R+TP CHS WP Y P
Sbjct: 238 NRWTPMCHSTVWPMFYVP 185
>gb|CA015269.1|CA015269 HT13M19r HT Hordeum vulgare subsp. vulgare cDNA clone HT13M19
5-PRIME, mRNA sequence
Length = 549
Score = 31.7 bits (63), Expect = 6.5
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +3 / -2
Query: 828 RPQGRKWLQWSKHTSDCNS 884
R +GR WL W SDCNS
Sbjct: 266 RTRGRSWLWWLACNSDCNS 210
>gb|CA030783.1|CA030783 HX08B22r HX Hordeum vulgare subsp. vulgare cDNA clone HX08B22
5-PRIME, mRNA sequence
Length = 582
Score = 31.7 bits (63), Expect = 6.5
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -1 / +1
Query: 125 RPSSNEMSRIPSMLFPMDSNGPLCPHTTLNPRDREGLLP 9
RP+S+ SR P+ S P CP T+ +P G P
Sbjct: 391 RPTSSASSRTPTSAPSTPSASPSCPRTSSSPAASAGSAP 507
>gb|CB875378.1|CB875378 HX08B22w HX Hordeum vulgare subsp. vulgare cDNA clone HX08B22
3-PRIME, mRNA sequence
Length = 531
Score = 31.7 bits (63), Expect = 6.5
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -1 / -3
Query: 125 RPSSNEMSRIPSMLFPMDSNGPLCPHTTLNPRDREGLLP 9
RP+S+ SR P+ S P CP T+ +P G P
Sbjct: 280 RPTSSASSRTPTSAPSTPSASPSCPRTSSSPAASAGSAP 164
>gb|CK124339.1|CK124339 BES1824108g17 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010G178 5-PRIME, mRNA sequence
Length = 657
Score = 31.7 bits (63), Expect = 6.5
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -1 / +1
Query: 125 RPSSNEMSRIPSMLFPMDSNGPLCPHTTLNPRDREGLLP 9
RP+S+ SR P+ S P CP T+ +P G P
Sbjct: 370 RPTSSASSRTPTSAPSTPSASPSCPRTSSSPAASAGSAP 486
>gb|BI947244.1|BI947244 HVSMEl0004K06f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0004K06f, mRNA sequence
Length = 970
Score = 26.6 bits (52), Expect(2) = 6.8
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = +3 / -2
Query: 840 RKWLQWSKHTSDCNSCRISSASASPH 917
RKWL C CRIS +S H
Sbjct: 189 RKWLWLFCPPPSCTKCRISCSSGGYH 112
Score = 22.1 bits (42), Expect(2) = 6.8
Identities = 8/20 (40%), Positives = 10/20 (50%)
Frame = +1 / -3
Query: 799 CTCPAGMSGDGLKEGSGCNG 858
C G G+G +G GC G
Sbjct: 302 CCQNGGCCGNGCCDGKGCCG 243
>gb|BI957298.1|BI957298 HVSMEn0008L15f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0008L15f, mRNA sequence
Length = 453
Score = 31.7 bits (63), Expect = 7.0
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +1 / -1
Query: 556 VLEWSVNGSSCEEAKLSGSYACAENAYCYNSSNGIG 663
V E + N + C+ A+ + ACA YC + G+G
Sbjct: 444 VYEQATNEALCQTARRGSTGACAPRTYCSIGTEGMG 337
>gb|BE603195.2|BE603195 HVSMEh0102H13f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0102H13f, mRNA sequence
Length = 746
Score = 24.8 bits (48), Expect(2) = 7.3
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = +1 / -3
Query: 634 YCYNSSNGIGYRCNCSSG 687
YC S + Y C C SG
Sbjct: 420 YCICSCRSVWYSCPCGSG 367
Score = 23.9 bits (46), Expect(2) = 7.3
Identities = 12/39 (30%), Positives = 13/39 (33%)
Frame = +1 / -3
Query: 742 CITRNPCTNRCSNTIGGFQCTCPAGMSGDGLKEGSGCNG 858
C R C G C G G+G G GC G
Sbjct: 342 CCDRIGCCRPNGGCCGNGFCCQNGGCCGNGCCGGKGCCG 226
>gb|AY946210.1| Hordeum vulgare subsp. vulgare 3' flanking sequence from Ds
insertion in TNP-11
Length = 1567
Score = 29.4 bits (58), Expect(2) = 7.7
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +1 / -1
Query: 664 YRCNCSSGFEGNPYL 708
Y C C G++GNPY+
Sbjct: 400 YVCKCWDGYDGNPYI 356
Score = 23.0 bits (44), Expect(2) = 7.7
Identities = 8/20 (40%), Positives = 10/20 (50%)
Frame = +1 / -3
Query: 1 GVAGKSPSLSRGFKVVCGHS 60
G+ GF+VVC HS
Sbjct: 1181 GIGAGPGCFREGFEVVCNHS 1122
>gb|BI946969.1|BI946969 HVSMEl0003A13f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0003A13f, mRNA sequence
Length = 695
Score = 28.9 bits (57), Expect(2) = 8.0
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +2 / -2
Query: 314 ALVEITSSTAHALGWLAAKRRFPKG*RSWT 403
A+V T T + WL + + FP+ SWT
Sbjct: 268 AMVSCTRRTYFPVSWLISSKYFPRSFFSWT 179
Score = 22.1 bits (42), Expect(2) = 8.0
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +3 / -2
Query: 840 RKWLQWSKHTSDCNSCRISSA 902
R + W+K TSD S +S A
Sbjct: 199 RSFFSWTKLTSDRTSADMSMA 137
>gb|BF625292.3|BF625292 HVSMEa0008E11f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0008E11f, mRNA sequence
Length = 633
Score = 31.2 bits (62), Expect = 9.0
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -1 / +1
Query: 125 RPSSNEMSRIPSMLFPMDSNGPLCPHTTLNPRDREGLLP 9
RP+S+ SR P+ S P CP T+ +P G P
Sbjct: 328 RPTSSGSSRTPTSAPSTPSASPSCPRTSSSPAASAGSAP 444
>gb|BF254043.1|BF254043 HVSMEf0002N14f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0002N14f, mRNA sequence
Length = 895
Score = 31.2 bits (62), Expect = 9.0
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -1 / +3
Query: 125 RPSSNEMSRIPSMLFPMDSNGPLCPHTTLNPRDREGLLP 9
RP+S+ SR P+ S P CP T+ +P G P
Sbjct: 351 RPTSSGSSRTPTSAPSTPSASPSCPRTSSSPAASAGSAP 467
>gb|BF626929.1|BF626929 HVSMEb0001L16f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0001L16f, mRNA sequence
Length = 872
Score = 31.2 bits (62), Expect = 9.0
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -2 / +2
Query: 478 RRRPDHMASNRNRCRC 431
RRRP H + +R RCRC
Sbjct: 8 RRRPPHRSRDRGRCRC 55
>gb|BI946721.1|BI946721 HVSMEl0002A09f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0002A09f, mRNA sequence
Length = 808
Score = 31.2 bits (62), Expect = 9.0
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -1 / +1
Query: 125 RPSSNEMSRIPSMLFPMDSNGPLCPHTTLNPRDREGLLP 9
RP+S+ SR P+ S P CP T+ +P G P
Sbjct: 277 RPTSSASSRTPTSAPSTPSASPSCPRTSSSPAASVGSAP 393
>gb|BE559100.1|BE559100 HV_CEb0022N12f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0022N12f, mRNA sequence
Length = 728
Score = 31.2 bits (62), Expect = 9.0
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +3 / +1
Query: 807 PSRDERRRPQGRKWLQWSKHTSDCNSCRISSASASP 914
P+R RRRP G +W +S C++ S + +P
Sbjct: 130 PARRPRRRPPGAGTGRWCPRSSSCSTSATRSCARTP 237
>gb|BE559132.2|BE559132 HV_CEb0023A11f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0023A11f, mRNA sequence
Length = 533
Score = 31.2 bits (62), Expect = 9.0
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +3 / +1
Query: 813 RDERRRPQGRKWLQWSKHTSDCNSCR 890
RDE RR Q R W W C CR
Sbjct: 349 RDEERRRQRRXWALWPLGPGLCRPCR 426
>gb|AJ435301.1|AJ435301 AJ435301 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200084A06F1, mRNA sequence
Length = 540
Score = 31.2 bits (62), Expect = 9.0
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -1 / +1
Query: 125 RPSSNEMSRIPSMLFPMDSNGPLCPHTTLNPRDREGLLP 9
RP+S+ SR P+ S P CP T+ +P G P
Sbjct: 283 RPTSSGSSRTPTSAPSTPSASPSCPRTSSSPAASAGSAP 399
>gb|CA005022.1|CA005022 HU12L19u HU Hordeum vulgare subsp. vulgare cDNA clone HU12L19
3-PRIME, mRNA sequence
Length = 440
Score = 31.2 bits (62), Expect = 9.0
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = +3 / +3
Query: 810 SRDERRRPQGRKWLQWSKHTSDCNSCRISSASASPH 917
SR G++W+ + + C CR SS SPH
Sbjct: 288 SRKYMDEGNGQRWISFHSRRTKCPHCRSSSPYDSPH 395
Database: Hordeum_nucl_with_EST.fasta
Posted date: May 2, 2006 2:38 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.316 0.133 0.426
Matrix: BLOSUM62
Number of Hits to DB: 547,469,317
Number of Sequences: 312970
Number of extensions: 10298207
Number of successful extensions: 79823
Number of sequences better than 10.0: 343
length of database: 58,378,179
effective HSP length: 49
effective length of database: 43,042,649
effective search space used: 11922813773
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.6 bits)