TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 4CL
(1986 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BE454671.3|BE454671 HVSMEh0094P16f Hordeum vulgare 5-45 ... 430 e-119
gb|BG344702.1|BG344702 HVSMEg0015E07f Hordeum vulgare pre-a... 409 e-115
gb|CK123691.1|CK123691 BES1824105b17 BES1824 Hordeum vulgar... 312 e-110
gb|BI956935.1|BI956935 HVSMEn0006D04f Hordeum vulgare rachi... 383 e-105
gb|BQ465081.1|BQ465081 HU02J12r HU Hordeum vulgare subsp. v... 375 e-103
gb|BQ763608.1|BQ763608 EBro02_SQ008_M23_R root, 3 week, hyd... 372 e-102
gb|BQ766207.1|BQ766207 EBro08_SQ005_H07_R root, 3 week, dro... 345 6e-094
gb|CK124865.1|CK124865 BES1824110k15 BES1824 Hordeum vulgar... 340 1e-092
gb|BE215262.2|BE215262 HV_CEb0006F04f Hordeum vulgare seedl... 337 1e-091
gb|AL510457.1|AL510457 AL510457 Hordeum vulgare Barke devel... 327 1e-088
gb|BI959998.1|BI959998 HVSMEn0022N01f Hordeum vulgare rachi... 311 1e-083
gb|BF623201.2|BF623201 HVSMEa0015K22f Hordeum vulgare seedl... 244 2e-079
gb|BE213865.1|BE213865 HV_CEb0001H21f Hordeum vulgare seedl... 282 4e-075
gb|BI958356.1|BI958356 HVSMEn0014I24f Hordeum vulgare rachi... 273 2e-072
gb|BF253382.2|BF253382 HVSMEf0001A07f Hordeum vulgare seedl... 264 4e-072
gb|CA012845.1|CA012845 HT06J23r HT Hordeum vulgare subsp. v... 214 2e-071
gb|BE193837.3|BE193837 HVSMEh0082K14f Hordeum vulgare 5-45 ... 253 2e-066
gb|BG414540.1|BG414540 HVSMEk0002N03f Hordeum vulgare testa... 195 4e-066
gb|CB882386.1|CB882386 HL01L15w HL Hordeum vulgare subsp. v... 236 4e-061
gb|BF064865.2|BF064865 HV_CEb0021D12f Hordeum vulgare seedl... 228 7e-059
gb|BE519742.1|BE519742 HV_CEb0021A20f Hordeum vulgare seedl... 172 8e-059
gb|AV916926.1|AV916926 AV916926 K. Sato unpublished cDNA li... 164 2e-056
gb|AL507037.1|AL507037 AL507037 Hordeum vulgare Barke devel... 185 2e-053
gb|AV918175.1|AV918175 AV918175 K. Sato unpublished cDNA li... 136 9e-051
gb|BF260187.2|BF260187 HVSMEf0021F10f Hordeum vulgare seedl... 197 2e-050
gb|BI959839.1|BI959839 HVSMEn0021P10f Hordeum vulgare rachi... 143 5e-048
gb|BU986484.1|BU986484 HF12A02r HF Hordeum vulgare subsp. v... 192 7e-048
gb|CA007491.1|CA007491 HU08C03r HU Hordeum vulgare subsp. v... 164 2e-047
gb|BE195071.1|BE195071 HVSMEh0088D12f Hordeum vulgare 5-45 ... 100 4e-046
gb|BE411374.1|BE411374 ISC004.H10F990609 ITEC ISC Barley Le... 116 6e-045
gb|BE411643.1|BE411643 ISC007.G04F990714 ITEC ISC Barley Le... 171 1e-043
gb|BM816676.1|BM816676 HB01C09_T3.ab1 HB Hordeum vulgare su... 104 8e-041
gb|BG418054.1|BG418054 HVSMEk0021B11f Hordeum vulgare testa... 166 3e-040
gb|AV833853.1|AV833853 AV833853 K. Sato unpublished cDNA li... 134 2e-039
gb|BF623616.2|BF623616 HVSMEa0003A08f Hordeum vulgare seedl... 90 9e-035
gb|AW983524.1|AW983524 HVSMEg0010P03f Hordeum vulgare pre-a... 64 2e-034
gb|AL502418.1|AL502418 AL502418 Hordeum vulgare Barke roots... 103 4e-029
gb|CA025271.1|CA025271 HZ51K14r HZ Hordeum vulgare subsp. v... 61 2e-022
gb|CA023903.1|CA023903 HZ47M06r HZ Hordeum vulgare subsp. v... 78 8e-022
gb|BQ757736.1|BQ757736 EBem10_SQ005_B05_R embryo, 2 Day ger... 101 1e-020
gb|BF621660.1|BF621660 HVSMEa0011M07f Hordeum vulgare seedl... 80 3e-020
gb|BQ663192.1|BQ663192 HU01C23w HU Hordeum vulgare subsp. v... 73 6e-020
gb|BQ464737.1|BQ464737 HU01C23T HU Hordeum vulgare subsp. v... 73 6e-020
gb|BU996800.1|BU996800 HM14M21r HM Hordeum vulgare subsp. v... 73 6e-020
gb|BI956206.1|BI956206 HVSMEn0001B17f Hordeum vulgare rachi... 90 3e-019
gb|BF620533.2|BF620533 HVSMEc0020C18f Hordeum vulgare seedl... 77 3e-018
gb|BJ477300.1|BJ477300 BJ477300 K. Sato unpublished cDNA li... 66 3e-018
gb|CV059902.1|CV059902 BNEL52b8 Barley EST endosperm librar... 93 6e-018
gb|CV061694.1|CV061694 BNEL70h10 Barley EST endosperm libra... 93 6e-018
gb|BQ766052.1|BQ766052 EBro03_SQ008_L23_R root, 3 week, wat... 81 2e-017
gb|BF064640.2|BF064640 HV_CEb0016I15f Hordeum vulgare seedl... 89 1e-016
gb|CA009125.1|CA009125 HU13D23r HU Hordeum vulgare subsp. v... 75 2e-016
gb|BF256299.3|BF256299 HVSMEf0009M24f Hordeum vulgare seedl... 68 2e-016
gb|CA028867.1|CA028867 HZ63H16r HZ Hordeum vulgare subsp. v... 68 1e-015
gb|CA005904.1|CA005904 HU08C03u HU Hordeum vulgare subsp. v... 82 9e-015
gb|CA016130.1|CA016130 HV10D20u HV Hordeum vulgare subsp. v... 82 1e-014
gb|BG365177.2|BG365177 HVSMEi0001K04f Hordeum vulgare 20 DA... 57 2e-013
gb|AL505142.1|AL505142 AL505142 Hordeum vulgare Barke roots... 59 5e-013
gb|CA018957.1|CA018957 HV10D20r HV Hordeum vulgare subsp. v... 64 7e-013
gb|AL510866.1|AL510866 AL510866 Hordeum vulgare Barke devel... 76 8e-013
gb|AL508215.1|AL508215 AL508215 Hordeum vulgare Barke devel... 68 1e-012
gb|CA013766.1|CA013766 HT09G19r HT Hordeum vulgare subsp. v... 69 9e-011
gb|BF267935.2|BF267935 HV_CEa0019F15f Hordeum vulgare seedl... 60 1e-010
gb|BQ762266.1|BQ762266 EBro01_SQ005_F10_R root, 3 week, hyd... 67 5e-010
gb|AV913361.1|AV913361 AV913361 K. Sato unpublished cDNA li... 65 2e-009
gb|BM443397.1|BM443397 EBro02_SQ003_O24_R root, 3 week, hyd... 65 2e-009
emb|AJ234602.1|HVU234602 Hordeum vulgare genomic DNA fragme... 65 2e-009
gb|CA018049.1|CA018049 HV07E04r HV Hordeum vulgare subsp. v... 64 2e-009
gb|CB881465.1|CB881465 HM09O10w HM Hordeum vulgare subsp. v... 57 6e-009
gb|BQ665660.1|BQ665660 HX04J15u HX Hordeum vulgare subsp. v... 56 1e-008
gb|BQ763564.1|BQ763564 EBro02_SQ008_E19 _R root, 3 week, hy... 53 1e-008
gb|BI950284.1|BI950284 HVSMEl0020B13f Hordeum vulgare spike... 61 3e-008
gb|BJ474400.1|BJ474400 BJ474400 K. Sato unpublished cDNA li... 61 3e-008
gb|BQ463067.1|BQ463067 HI02O22r HI Hordeum vulgare subsp. v... 56 7e-008
gb|AL511453.1|AL511453 AL511453 Hordeum vulgare Barke devel... 52 9e-008
gb|BQ661571.1|BQ661571 HM04B05u HM Hordeum vulgare subsp. v... 46 9e-008
gb|BI960111.1|BI960111 HVSMEn0023E11f Hordeum vulgare rachi... 47 2e-007
gb|BQ765790.1|BQ765790 EBro03_SQ008_M06_R root, 3 week, wat... 47 2e-007
gb|AV913041.1|AV913041 AV913041 K. Sato unpublished cDNA li... 39 3e-007
gb|BG345167.2|BG345167 HVSMEg0018P07f Hordeum vulgare pre-a... 40 3e-007
gb|BU978200.1|BU978200 HA12L21r HA Hordeum vulgare subsp. v... 38 4e-007
gb|CK123786.1|CK123786 BES1824105f17 BES1824 Hordeum vulgar... 39 4e-007
gb|BF259938.3|BF259938 HVSMEf0020K19f Hordeum vulgare seedl... 54 2e-006
gb|BJ466987.1|BJ466987 BJ466987 K. Sato unpublished cDNA li... 47 4e-006
gb|BU990554.1|BU990554 HF25G09r HF Hordeum vulgare subsp. v... 38 5e-006
gb|BU969149.1|BU969149 HB10K23r BC Hordeum vulgare subsp. v... 38 5e-006
gb|BU982992.1|BU982992 HA28D13r HA Hordeum vulgare subsp. v... 38 9e-006
gb|AV920735.1|AV920735 AV920735 K. Sato unpublished cDNA li... 39 1e-005
gb|BJ467948.1|BJ467948 BJ467948 K. Sato unpublished cDNA li... 39 1e-005
gb|BJ463772.1|BJ463772 BJ463772 K. Sato unpublished cDNA li... 39 1e-005
gb|CA001954.1|CA001954 HS06B15r HS Hordeum vulgare subsp. v... 39 1e-005
gb|BJ463781.1|BJ463781 BJ463781 K. Sato unpublished cDNA li... 39 1e-005
gb|BM098353.2|BM098353 EBem08_SQ002_K07_R embryo, 40 DPA, n... 50 6e-005
gb|BI780833.2|BI780833 EBma05_SQ001_B11_R maternal, 12 DPA,... 50 6e-005
gb|BM099042.2|BM099042 EBpi05_SQ002_M14_R pistil, 8 DPA, no... 36 6e-005
gb|BU987989.1|BU987989 HF16F15r HF Hordeum vulgare subsp. v... 36 1e-004
gb|AL509660.1|AL509660 AL509660 Hordeum vulgare Barke devel... 41 1e-004
gb|AV916540.1|AV916540 AV916540 K. Sato unpublished cDNA li... 36 2e-004
gb|AV914001.1|AV914001 AV914001 K. Sato unpublished cDNA li... 36 2e-004
gb|AV910162.1|AV910162 AV910162 K. Sato unpublished cDNA li... 36 2e-004
gb|BJ472972.1|BJ472972 BJ472972 K. Sato unpublished cDNA li... 41 2e-004
gb|BQ663035.1|BQ663035 HT01G04w HT Hordeum vulgare subsp. v... 48 2e-004
gb|BE214775.3|BE214775 HV_CEb0004I22f Hordeum vulgare seedl... 28 3e-004
gb|CA028481.1|CA028481 HZ62C03r HZ Hordeum vulgare subsp. v... 47 3e-004
gb|BM442982.2|BM442982 EBro02_SQ002_B12_R root, 3 week, hyd... 33 4e-004
gb|BF065954.2|BF065954 HV_CEb0014H05f Hordeum vulgare seedl... 28 5e-004
gb|BF065930.2|BF065930 HV_CEb0014G05f Hordeum vulgare seedl... 28 5e-004
gb|BI959359.1|BI959359 HVSMEn0019F21f Hordeum vulgare rachi... 28 5e-004
gb|BQ768830.1|BQ768830 EBro08_SQ012_E21_R root, 3 week, dro... 41 9e-004
gb|BU978274.1|BU978274 HA12N19r HA Hordeum vulgare subsp. v... 37 0.001
gb|BJ472368.1|BJ472368 BJ472368 K. Sato unpublished cDNA li... 45 0.001
gb|BJ471298.1|BJ471298 BJ471298 K. Sato unpublished cDNA li... 45 0.001
gb|AV932377.1|AV932377 AV932377 K. Sato unpublished cDNA li... 45 0.001
gb|BJ463929.1|BJ463929 BJ463929 K. Sato unpublished cDNA li... 36 0.001
gb|BM443022.2|BM443022 EBro02_SQ002_D13_R root, 3 week, hyd... 32 0.001
gb|BI952907.1|BI952907 HVSMEm0008F07f Hordeum vulgare green... 45 0.002
gb|AV935233.1|AV935233 AV935233 K. Sato unpublished cDNA li... 45 0.002
gb|BJ475483.1|BJ475483 BJ475483 K. Sato unpublished cDNA li... 45 0.002
gb|BJ476363.1|BJ476363 BJ476363 K. Sato unpublished cDNA li... 45 0.002
gb|BJ477302.1|BJ477302 BJ477302 K. Sato unpublished cDNA li... 45 0.002
gb|BQ657921.1|BQ657921 HA06G23u HA Hordeum vulgare subsp. v... 45 0.002
gb|BU971768.1|BU971768 HB19J23r BC Hordeum vulgare subsp. v... 45 0.002
gb|AL500161.1|AL500161 AL500161 Hordeum vulgare Barke etiol... 40 0.003
gb|BI954852.1|BI954852 HVSMEm0020B01f Hordeum vulgare green... 27 0.009
gb|BM373636.2|BM373636 EBma03_SQ002_D01_R maternal, 8 DPA, ... 42 0.013
gb|BU985792.1|BU985792 HF08K06r HF Hordeum vulgare subsp. v... 41 0.017
gb|BU995953.1|BU995953 HM11O07r HM Hordeum vulgare subsp. v... 41 0.017
gb|CV061636.1|CV061636 BNEL70b9 Barley EST endosperm librar... 33 0.019
gb|BJ463779.1|BJ463779 BJ463779 K. Sato unpublished cDNA li... 32 0.024
gb|BI778919.2|BI778919 EBro01_SQ002_A21_R root, 3 week, hyd... 41 0.024
gb|BQ762573.1|BQ762573 EBro02_SQ004_G12_R root, 3 week, hyd... 40 0.033
gb|BI958869.1|BI958869 HVSMEn0016P06f Hordeum vulgare rachi... 30 0.034
gb|AV925980.1|AV925980 AV925980 K. Sato unpublished cDNA li... 31 0.035
gb|BG418549.2|BG418549 HVSMEk0023B10f Hordeum vulgare testa... 30 0.046
gb|BE060773.3|BE060773 HVSMEg0013F05f Hordeum vulgare pre-a... 39 0.047
gb|AV832773.1|AV832773 AV832773 K. Sato unpublished cDNA li... 35 0.059
gb|BJ469195.1|BJ469195 BJ469195 K. Sato unpublished cDNA li... 35 0.059
gb|BF630427.2|BF630427 HVSMEb0009F10f Hordeum vulgare seedl... 36 0.066
gb|AV833459.1|AV833459 AV833459 K. Sato unpublished cDNA li... 39 0.086
gb|AV915470.1|AV915470 AV915470 K. Sato unpublished cDNA li... 39 0.086
gb|AV917795.1|AV917795 AV917795 K. Sato unpublished cDNA li... 39 0.086
gb|AV920565.1|AV920565 AV920565 K. Sato unpublished cDNA li... 39 0.086
gb|BJ462667.1|BJ462667 BJ462667 K. Sato unpublished cDNA li... 39 0.086
gb|BJ462771.1|BJ462771 BJ462771 K. Sato unpublished cDNA li... 39 0.086
gb|BJ467957.1|BJ467957 BJ467957 K. Sato unpublished cDNA li... 39 0.086
gb|CV062288.1|CV062288 BNEL78d2 Barley EST endosperm librar... 31 0.095
gb|BM816889.1|BM816889 HC04A02_T3.ab1 HC Hordeum vulgare su... 33 0.11
gb|AV918894.1|AV918894 AV918894 K. Sato unpublished cDNA li... 29 0.11
gb|CA025940.1|CA025940 HZ53J12r HZ Hordeum vulgare subsp. v... 39 0.12
gb|AF000940.1|AF000940 Hordeum vulgare ribonuclease gene, c... 32 0.15
gb|BI951631.1|BI951631 HVSMEm0001L07f Hordeum vulgare green... 29 0.15
gb|BI948051.1|BI948051 HVSMEl0008A05f Hordeum vulgare spike... 28 0.15
gb|BF263223.2|BF263223 HV_CEa0006C20f Hordeum vulgare seedl... 38 0.16
gb|BG367154.2|BG367154 HVSMEi0011A18f Hordeum vulgare 20 DA... 38 0.16
gb|BM816388.1|BM816388 HB02D12_T3.ab1 HB Hordeum vulgare su... 38 0.16
gb|BM373145.2|BM373145 EBma04_SQ003_E13_R maternal, 10 DPA,... 38 0.16
gb|BQ754375.1|BQ754375 EBca01_SQ003_M06_R carpel, pre-anthe... 33 0.17
gb|BJ463643.1|BJ463643 BJ463643 K. Sato unpublished cDNA li... 29 0.17
gb|BJ462651.1|BJ462651 BJ462651 K. Sato unpublished cDNA li... 29 0.19
gb|BI952014.1|BI952014 HVSMEm0004D15f Hordeum vulgare green... 34 0.19
gb|BU988485.1|BU988485 HF17M14r HF Hordeum vulgare subsp. v... 31 0.20
gb|BI947741.1|BI947741 HVSMEl0006L04f Hordeum vulgare spike... 29 0.20
gb|BI949299.1|BI949299 HVSMEl0013D15f Hordeum vulgare spike... 29 0.20
gb|BE455773.2|BE455773 HVSMEg0019M22f Hordeum vulgare pre-a... 24 0.21
gb|BQ471311.1|BQ471311 HV02A13r HV Hordeum vulgare subsp. v... 31 0.21
gb|BF621591.3|BF621591 HVSMEa0011I11f Hordeum vulgare seedl... 29 0.21
gb|BM370199.2|BM370199 EBro08_SQ003_E18_R root, 3 week, dro... 29 0.21
gb|BQ461012.1|BQ461012 HE01H09r HE Hordeum vulgare subsp. v... 29 0.21
gb|BF066098.1|BF066098 HV_CEb0014N11f Hordeum vulgare seedl... 38 0.22
gb|BM816593.1|BM816593 HB106H01_SK.ab1 HB Hordeum vulgare s... 38 0.22
gb|BQ467377.1|BQ467377 HS03J05r HS Hordeum vulgare subsp. v... 38 0.22
gb|BQ662668.1|BQ662668 HS03J05u HS Hordeum vulgare subsp. v... 38 0.22
gb|BI779648.2|BI779648 EBro01_SQ004_K20_R root, 3 week, hyd... 38 0.22
gb|BM443157.2|BM443157 EBro02_SQ002_M17_R root, 3 week, hyd... 38 0.22
gb|BM443180.2|BM443180 EBro02_SQ002_P04_R root, 3 week, hyd... 38 0.22
gb|BQ766858.1|BQ766858 EBro08_SQ007_G07_R root, 3 week, dro... 38 0.22
gb|BU980311.1|BU980311 HA20E20r HA Hordeum vulgare subsp. v... 38 0.22
gb|BU999337.1|BU999337 HI14D06r HI Hordeum vulgare subsp. v... 38 0.22
gb|CA008224.1|CA008224 HU10E19r HU Hordeum vulgare subsp. v... 38 0.22
gb|CA024558.1|CA024558 HZ49K09r HZ Hordeum vulgare subsp. v... 38 0.22
gb|CA030480.1|CA030480 HX07D01r HX Hordeum vulgare subsp. v... 38 0.22
gb|CA031446.1|CA031446 HX09P12r HX Hordeum vulgare subsp. v... 38 0.22
gb|BU976603.1|BU976603 HA03P15r HA Hordeum vulgare subsp. v... 31 0.28
gb|AV928766.1|AV928766 AV928766 K. Sato unpublished cDNA li... 28 0.28
gb|CV057327.1|CV057327 BNEL26e7 Barley EST endosperm librar... 31 0.28
gb|BM372440.2|BM372440 EBro03_SQ004_P11_R root, 3 week, wat... 29 0.29
gb|BQ659445.1|BQ659445 HE01H09u HE Hordeum vulgare subsp. v... 29 0.29
gb|CA031501.1|CA031501 HX10C23r HX Hordeum vulgare subsp. v... 37 0.30
gb|CB877674.1|CB877674 HP05M14T HP Hordeum vulgare subsp. v... 37 0.30
gb|CV056083.1|CV056083 BNEL13G11 Barley EST endosperm libra... 30 0.38
gb|CB875660.1|CB875660 HX08P17w HX Hordeum vulgare subsp. v... 27 0.38
gb|BF255758.1|BF255758 HVSMEf0007L17f Hordeum vulgare seedl... 37 0.42
gb|BI952857.1|BI952857 HVSMEm0007P20f Hordeum vulgare green... 37 0.42
gb|BI954277.1|BI954277 HVSMEm0016P07f Hordeum vulgare green... 37 0.42
gb|BI957820.1|BI957820 HVSMEn0011H20f Hordeum vulgare rachi... 37 0.42
gb|AV913592.1|AV913592 AV913592 K. Sato unpublished cDNA li... 37 0.42
gb|AV917116.1|AV917116 AV917116 K. Sato unpublished cDNA li... 37 0.42
gb|CA031088.1|CA031088 HX08P17r HX Hordeum vulgare subsp. v... 37 0.42
gb|BI948719.1|BI948719 HVSMEl0010J18f Hordeum vulgare spike... 24 0.48
gb|BG365769.2|BG365769 HVSMEi0004C05f Hordeum vulgare 20 DA... 29 0.50
gb|BI958905.1|BI958905 HVSMEn0017C09f Hordeum vulgare rachi... 36 0.50
gb|AW982167.3|AW982167 HVSMEg0002A07f Hordeum vulgare pre-a... 30 0.50
gb|AW983084.3|AW983084 HVSMEg0008A19f Hordeum vulgare pre-a... 30 0.50
gb|AV933308.1|AV933308 AV933308 K. Sato unpublished cDNA li... 29 0.51
gb|BI960514.1|BI960514 HVSMEn0024N24f Hordeum vulgare rachi... 30 0.51
gb|BJ469060.1|BJ469060 BJ469060 K. Sato unpublished cDNA li... 29 0.51
gb|BJ472806.1|BJ472806 BJ472806 K. Sato unpublished cDNA li... 29 0.51
gb|CA023822.1|CA023822 HZ47I05r HZ Hordeum vulgare subsp. v... 29 0.52
gb|BE558554.2|BE558554 HV_CEb0018J07f Hordeum vulgare seedl... 28 0.57
gb|BF255868.2|BF255868 HVSMEf0008A20f Hordeum vulgare seedl... 28 0.57
gb|AL505065.1|AL505065 AL505065 Hordeum vulgare Barke roots... 36 0.58
gb|BF620564.2|BF620564 HVSMEc0020E02f Hordeum vulgare seedl... 36 0.58
gb|BF255154.2|BF255154 HVSMEf0006B16f Hordeum vulgare seedl... 36 0.58
gb|BG342945.1|BG342945 HVSMEg0001G23f Hordeum vulgare pre-a... 36 0.58
gb|BE519588.2|BE519588 HV_CEb0016D20f Hordeum vulgare seedl... 36 0.58
gb|BJ468951.1|BJ468951 BJ468951 K. Sato unpublished cDNA li... 36 0.58
gb|BJ470370.1|BJ470370 BJ470370 K. Sato unpublished cDNA li... 36 0.58
gb|BJ471576.1|BJ471576 BJ471576 K. Sato unpublished cDNA li... 36 0.58
gb|BQ464845.1|BQ464845 HU01M22T HU Hordeum vulgare subsp. v... 36 0.58
gb|BQ762362.1|BQ762362 EBro01_SQ005_I17_R root, 3 week, hyd... 36 0.58
gb|BU999899.1|BU999899 HS16N05u HS Hordeum vulgare subsp. v... 36 0.58
gb|CA005026.1|CA005026 HU12M06u HU Hordeum vulgare subsp. v... 36 0.58
gb|CA005661.1|CA005661 HU09G04u HU Hordeum vulgare subsp. v... 36 0.58
gb|CA007918.1|CA007918 HU09G04r HU Hordeum vulgare subsp. v... 36 0.58
gb|CK124181.1|CK124181 BES1824107f04 BES1824 Hordeum vulgar... 36 0.58
gb|BI956876.1|BI956876 HVSMEn0005M16f Hordeum vulgare rachi... 30 0.62
gb|BE601560.3|BE601560 HVSMEh0098G24f Hordeum vulgare 5-45 ... 29 0.64
gb|CK122304.1|CK122304 BES1824102n01 BES1824 Hordeum vulgar... 29 0.64
gb|BF620342.2|BF620342 HVSMEc0019I13f Hordeum vulgare seedl... 32 0.64
gb|BI951808.1|BI951808 HVSMEm0003A02f Hordeum vulgare green... 31 0.66
gb|BI949465.1|BI949465 HVSMEl0014A18f Hordeum vulgare spike... 29 0.67
gb|BF065831.1|BF065831 HV_CEb0014B20f Hordeum vulgare seedl... 31 0.67
gb|CB875043.1|CB875043 HX07B20w HX Hordeum vulgare subsp. v... 27 0.69
gb|CA029809.1|CA029809 HX05E12r HX Hordeum vulgare subsp. v... 27 0.69
gb|BQ458684.1|BQ458684 HA04I03r HA Hordeum vulgare subsp. v... 27 0.69
gb|AL499828.1|AL499828 AL499828 Hordeum vulgare Barke etiol... 36 0.79
gb|BF631467.2|BF631467 HVSMEb0016A16f Hordeum vulgare seedl... 36 0.79
gb|BG344320.1|BG344320 HVSMEg0008M22f Hordeum vulgare pre-a... 36 0.79
gb|BG365831.1|BG365831 HVSMEi0004G10f Hordeum vulgare 20 DA... 36 0.79
gb|BE214050.2|BE214050 HV_CEb0002A10f Hordeum vulgare seedl... 36 0.79
gb|BG300498.2|BG300498 HVSMEb0017E07f Hordeum vulgare seedl... 36 0.79
gb|BG344700.2|BG344700 HVSMEg0015E05f Hordeum vulgare pre-a... 36 0.79
gb|BJ473108.1|BJ473108 BJ473108 K. Sato unpublished cDNA li... 36 0.79
gb|BM097757.2|BM097757 EBem04_SQ002_J19_R embryo, 12 DPA, n... 36 0.79
gb|BU980077.1|BU980077 HA18H11r HA Hordeum vulgare subsp. v... 36 0.79
gb|BU994106.1|BU994106 HM05M03r HM Hordeum vulgare subsp. v... 36 0.79
gb|BU995847.1|BU995847 HM11I22r HM Hordeum vulgare subsp. v... 36 0.79
gb|CA012108.1|CA012108 HT04H12r HT Hordeum vulgare subsp. v... 36 0.79
gb|CA016846.1|CA016846 HV05L18u HV Hordeum vulgare subsp. v... 36 0.79
gb|CA017047.1|CA017047 HV05C16u HV Hordeum vulgare subsp. v... 36 0.79
gb|CA020634.1|CA020634 HZ36O20r HZ Hordeum vulgare subsp. v... 36 0.79
gb|CA026040.1|CA026040 HZ53O17r HZ Hordeum vulgare subsp. v... 36 0.79
gb|CA028479.1|CA028479 HZ62C01r HZ Hordeum vulgare subsp. v... 36 0.79
gb|CA028732.1|CA028732 HZ63B16r HZ Hordeum vulgare subsp. v... 36 0.79
gb|CK125801.1|CK125801 BES1824110n12 BES1824 Hordeum vulgar... 36 0.79
gb|BI778477.2|BI778477 EBro07_SQ003_G15_R root, 3 week, red... 29 0.83
gb|BI950689.1|BI950689 HVSMEl0022I09f Hordeum vulgare spike... 32 0.89
gb|BF256091.2|BF256091 HVSMEf0008L13f Hordeum vulgare seedl... 27 0.91
gb|BE193240.3|BE193240 HVSMEh0080E11f Hordeum vulgare 5-45 ... 29 0.91
gb|BI959541.1|BI959541 HVSMEn0020C03f Hordeum vulgare rachi... 31 0.92
gb|BF621939.2|BF621939 HVSMEa0001F11f Hordeum vulgare seedl... 35 1.1
gb|BF623871.2|BF623871 HVSMEa0007G16f Hordeum vulgare seedl... 35 1.1
gb|BF629311.2|BF629311 HVSMEb0010M07f Hordeum vulgare seedl... 35 1.1
gb|BG300780.1|BG300780 HVSMEb0018G05f Hordeum vulgare seedl... 35 1.1
gb|BF629544.3|BF629544 HVSMEb0013E14f Hordeum vulgare seedl... 35 1.1
gb|BE454365.3|BE454365 HVSMEh0093N16f Hordeum vulgare 5-45 ... 35 1.1
gb|AV915628.1|AV915628 AV915628 K. Sato unpublished cDNA li... 35 1.1
gb|BJ447277.1|BJ447277 BJ447277 K. Sato unpublished cDNA li... 35 1.1
gb|BJ462572.1|BJ462572 BJ462572 K. Sato unpublished cDNA li... 35 1.1
gb|BJ471642.1|BJ471642 BJ471642 K. Sato unpublished cDNA li... 35 1.1
gb|BQ458394.1|BQ458394 HA05F18r HA Hordeum vulgare subsp. v... 35 1.1
gb|BQ658189.1|BQ658189 HA05F18u HA Hordeum vulgare subsp. v... 35 1.1
gb|BU971258.1|BU971258 HB17B08r BC Hordeum vulgare subsp. v... 35 1.1
gb|BU986267.1|BU986267 HF11D11r HF Hordeum vulgare subsp. v... 35 1.1
gb|BU989579.1|BU989579 HF22C01r HF Hordeum vulgare subsp. v... 35 1.1
gb|CA031888.1|CA031888 HX11G18r HX Hordeum vulgare subsp. v... 35 1.1
gb|CB876483.1|CB876483 HX11G18w HX Hordeum vulgare subsp. v... 35 1.1
gb|CB879312.1|CB879312 HP11L10T HP Hordeum vulgare subsp. v... 35 1.1
gb|CB882767.1|CB882767 HL02M17w HL Hordeum vulgare subsp. v... 35 1.1
gb|CK122811.1|CK122811 BES1824106a15 BES1824 Hordeum vulgar... 35 1.1
gb|BI953024.1|BI953024 HVSMEm0009G02f Hordeum vulgare green... 34 1.1
gb|AL503854.1|AL503854 AL503854 Hordeum vulgare Barke roots... 30 1.1
gb|BU998672.1|BU998672 HI11M24r HI Hordeum vulgare subsp. v... 25 1.1
gb|BI778536.2|BI778536 EBro07_SQ003_J05_R root, 3 week, red... 31 1.1
gb|AV934171.1|AV934171 AV934171 K. Sato unpublished cDNA li... 32 1.2
gb|AF136942.1|AF136942 Hordeum vulgare nicotianamine syntha... 30 1.3
gb|AL503360.1|AL503360 AL503360 Hordeum vulgare Barke roots... 27 1.4
gb|AY972619.1| Hordeum vulgare subsp. vulgare cultivar More... 29 1.4
gb|BF627840.2|BF627840 HVSMEb0005P03f Hordeum vulgare seedl... 32 1.5
gb|BQ760869.1|BQ760869 EBro03_SQ003_L07_R root, 3 week, wat... 33 1.5
gb|BF627318.2|BF627318 HVSMEb0004I16f Hordeum vulgare seedl... 35 1.5
gb|BF256866.2|BF256866 HVSMEf0011D17f Hordeum vulgare seedl... 35 1.5
gb|BG365807.1|BG365807 HVSMEi0004E18f Hordeum vulgare 20 DA... 35 1.5
gb|BE519792.1|BE519792 HV_CEb0021E03f Hordeum vulgare seedl... 35 1.5
gb|BF263234.2|BF263234 HV_CEa0006D08f Hordeum vulgare seedl... 35 1.5
gb|BF264585.2|BF264585 HV_CEa0009N05f Hordeum vulgare seedl... 35 1.5
gb|BE215887.2|BE215887 HV_CEb0008M02f Hordeum vulgare seedl... 35 1.5
gb|BE216339.2|BE216339 HV_CEb0010D19f Hordeum vulgare seedl... 35 1.5
gb|BI959651.1|BI959651 HVSMEn0020J21f Hordeum vulgare rachi... 35 1.5
gb|BG367047.2|BG367047 HVSMEi0009P04f Hordeum vulgare 20 DA... 35 1.5
gb|BF265194.3|BF265194 HV_CEa0011I15f Hordeum vulgare seedl... 35 1.5
gb|BF065097.2|BF065097 HV_CEb0022P17f Hordeum vulgare seedl... 35 1.5
gb|AV914344.1|AV914344 AV914344 K. Sato unpublished cDNA li... 35 1.5
gb|BQ739792.1|BQ739792 HB02E10 HB Hordeum vulgare subsp. vu... 35 1.5
gb|BQ739803.1|BQ739803 HB03F03 HB Hordeum vulgare subsp. vu... 35 1.5
gb|BM370997.2|BM370997 EBro04_SQ003_C20_R root, 3 week, sal... 35 1.5
gb|BQ760591.1|BQ760591 EBro03_SQ001_O03_R root, 3 week, wat... 35 1.5
gb|BQ762640.1|BQ762640 EBro02_SQ004_G15_R root, 3 week, hyd... 35 1.5
gb|CA001434.1|CA001434 HS17O03u HS Hordeum vulgare subsp. v... 35 1.5
gb|CA002995.1|CA002995 HS09B16r HS Hordeum vulgare subsp. v... 35 1.5
gb|CA013561.1|CA013561 HT08N12r HT Hordeum vulgare subsp. v... 35 1.5
gb|CB876809.1|CB876809 HP02H18T HP Hordeum vulgare subsp. v... 35 1.5
gb|CB878197.1|CB878197 HP07K22T HP Hordeum vulgare subsp. v... 35 1.5
gb|CB879497.1|CB879497 HP02H18w HP Hordeum vulgare subsp. v... 35 1.5
gb|CV055038.1|CV055038 BNEL116b2 Barley EST endosperm libra... 35 1.5
gb|CV056757.1|CV056757 BNEL20c4 Barley EST endosperm librar... 35 1.5
gb|CV058398.1|CV058398 BNEL37f12 Barley EST endosperm libra... 35 1.5
gb|CV060039.1|CV060039 BNEL53g1 Barley EST endosperm librar... 35 1.5
gb|U22450.1|HVU22450 Hordeum vulgare alpha-glucosidase mRNA... 35 1.5
gb|AH014393.1|SEG_AY643842S Hordeum vulgare subsp. vulgare ... 35 1.5
gb|AY643844.1|AY643842S3 Hordeum vulgare subsp. vulgare clo... 35 1.5
gb|BF630976.2|BF630976 HVSMEb0014J16f Hordeum vulgare seedl... 29 1.5
gb|BI952198.1|BI952198 HVSMEm0004P11f Hordeum vulgare green... 31 1.5
gb|AY551433.1| Hordeum vulgare subsp. vulgare GA 2-oxidase ... 26 1.5
gb|CA030122.1|CA030122 HX06C11r HX Hordeum vulgare subsp. v... 33 1.5
gb|AY972625.1| Hordeum vulgare subsp. vulgare cultivar Opti... 29 1.5
gb|AY972624.1| Hordeum vulgare subsp. vulgare cultivar Step... 29 1.5
gb|AY972626.1| Hordeum vulgare subsp. vulgare cultivar Carl... 29 1.5
gb|AY972627.1| Hordeum vulgare subsp. vulgare cultivar Park... 29 1.5
gb|AY273923.1| Hordeum vulgare subsp. vulgare putative cycl... 29 1.6
gb|BU995159.1|BU995159 HM09G09r HM Hordeum vulgare subsp. v... 33 1.6
gb|BF620508.3|BF620508 HVSMEc0020B16f Hordeum vulgare seedl... 32 1.6
gb|BG416858.1|BG416858 HVSMEk0014O06f Hordeum vulgare testa... 33 1.6
gb|BM377772.2|BM377772 EBem04_SQ004_C02_R embryo, 12 DPA, n... 33 1.6
gb|BF256497.2|BF256497 HVSMEf0010C10f Hordeum vulgare seedl... 29 1.6
gb|BM369890.2|BM369890 EBem07_SQ004_O11_R embryo, 28 DPA, n... 33 1.6
gb|BI952420.1|BI952420 HVSMEm0006E09f Hordeum vulgare green... 29 1.6
gb|BE602885.3|BE602885 HVSMEh0100J11f Hordeum vulgare 5-45 ... 33 1.7
gb|BF630367.2|BF630367 HVSMEb0008O09f Hordeum vulgare seedl... 33 1.7
gb|BM098651.2|BM098651 EBem08_SQ003_K24_R embryo, 40 DPA, n... 33 1.7
gb|CA027302.1|CA027302 HZ58I11r HZ Hordeum vulgare subsp. v... 29 1.7
gb|BG343493.1|BG343493 HVSMEg0005O15f Hordeum vulgare pre-a... 25 1.7
gb|BM377987.2|BM377987 EBem04_SQ004_M24_R embryo, 12 DPA, n... 33 1.9
gb|BQ763848.1|BQ763848 EBro03_SQ005_G15_R root, 3 week, wat... 33 1.9
gb|BM369250.2|BM369250 EBem07_SQ003_A18_R embryo, 28 DPA, n... 33 1.9
gb|BQ764722.1|BQ764722 EBca01_SQ004_O16_R carpel, pre-anthe... 33 1.9
gb|CV053587.1|CV053587 BNEL100h7 Barley EST endosperm libra... 33 2.0
gb|CV058762.1|CV058762 BNEL40f11 Barley EST endosperm libra... 33 2.0
gb|BF260014.3|BF260014 HVSMEf0020N24f Hordeum vulgare seedl... 31 2.0
gb|BM375487.2|BM375487 EBem06_SQ003_H23_R embryo, 21 DPA, n... 33 2.0
gb|BQ764140.1|BQ764140 EBro03_SQ006_K09_R root, 3 week, wat... 33 2.0
gb|BQ765003.1|BQ765003 EBca01_SQ005_C14_R carpel, pre-anthe... 33 2.0
gb|BQ766152.1|BQ766152 EBro08_SQ005_N03_R root, 3 week, dro... 33 2.0
gb|BI780203.2|BI780203 EBma08_SQ001_L05_R maternal, 28 DPA,... 33 2.0
gb|CV056187.1|CV056187 BNEL14H5 Barley EST endosperm librar... 33 2.0
gb|AL450536.1|AL450536 AL450536 Hordeum vulgare Barke etiol... 35 2.0
gb|AL508798.1|AL508798 AL508798 Hordeum vulgare Barke devel... 35 2.0
gb|BG299479.1|BG299479 HVSMEa0020E20f Hordeum vulgare seedl... 35 2.0
gb|BE060150.1|BE060150 HVSMEg0011A19f Hordeum vulgare pre-a... 35 2.0
gb|BG342891.1|BG342891 HVSMEg0001C11f Hordeum vulgare pre-a... 35 2.0
gb|BI954622.1|BI954622 HVSMEm0018O12f Hordeum vulgare green... 35 2.0
gb|BI954764.1|BI954764 HVSMEm0019K11f Hordeum vulgare green... 35 2.0
gb|BI955819.1|BI955819 HVSMEm0024K21f Hordeum vulgare green... 35 2.0
gb|BI956883.1|BI956883 HVSMEn0005N09f Hordeum vulgare rachi... 35 2.0
gb|BI957488.1|BI957488 HVSMEn0009N11f Hordeum vulgare rachi... 35 2.0
gb|BI959525.1|BI959525 HVSMEn0020A16f Hordeum vulgare rachi... 35 2.0
gb|BG344101.2|BG344101 HVSMEg0007K14f Hordeum vulgare pre-a... 35 2.0
gb|BG366195.2|BG366195 HVSMEi0006D05f Hordeum vulgare 20 DA... 35 2.0
gb|AV911733.1|AV911733 AV911733 K. Sato unpublished cDNA li... 35 2.0
gb|AV912354.1|AV912354 AV912354 K. Sato unpublished cDNA li... 35 2.0
gb|AJ462865.1|AJ462865 AJ462865 S00002 Hordeum vulgare subs... 35 2.0
gb|BJ447183.1|BJ447183 BJ447183 K. Sato unpublished cDNA li... 35 2.0
gb|BJ447417.1|BJ447417 BJ447417 K. Sato unpublished cDNA li... 35 2.0
gb|BJ448894.1|BJ448894 BJ448894 K. Sato unpublished cDNA li... 35 2.0
gb|BJ449450.1|BJ449450 BJ449450 K. Sato unpublished cDNA li... 35 2.0
gb|BJ450292.1|BJ450292 BJ450292 K. Sato unpublished cDNA li... 35 2.0
gb|BJ450485.1|BJ450485 BJ450485 K. Sato unpublished cDNA li... 35 2.0
gb|BJ450822.1|BJ450822 BJ450822 K. Sato unpublished cDNA li... 35 2.0
gb|BJ451888.1|BJ451888 BJ451888 K. Sato unpublished cDNA li... 35 2.0
gb|BJ453496.1|BJ453496 BJ453496 K. Sato unpublished cDNA li... 35 2.0
gb|BJ453867.1|BJ453867 BJ453867 K. Sato unpublished cDNA li... 35 2.0
gb|BJ454554.1|BJ454554 BJ454554 K. Sato unpublished cDNA li... 35 2.0
gb|BJ454686.1|BJ454686 BJ454686 K. Sato unpublished cDNA li... 35 2.0
gb|BJ455160.1|BJ455160 BJ455160 K. Sato unpublished cDNA li... 35 2.0
gb|BJ457663.1|BJ457663 BJ457663 K. Sato unpublished cDNA li... 35 2.0
gb|BJ457715.1|BJ457715 BJ457715 K. Sato unpublished cDNA li... 35 2.0
gb|BJ457908.1|BJ457908 BJ457908 K. Sato unpublished cDNA li... 35 2.0
gb|BJ458272.1|BJ458272 BJ458272 K. Sato unpublished cDNA li... 35 2.0
gb|BJ459304.1|BJ459304 BJ459304 K. Sato unpublished cDNA li... 35 2.0
gb|BJ461041.1|BJ461041 BJ461041 K. Sato unpublished cDNA li... 35 2.0
gb|BJ461402.1|BJ461402 BJ461402 K. Sato unpublished cDNA li... 35 2.0
gb|BJ462035.1|BJ462035 BJ462035 K. Sato unpublished cDNA li... 35 2.0
gb|BJ462355.1|BJ462355 BJ462355 K. Sato unpublished cDNA li... 35 2.0
gb|BQ460834.1|BQ460834 HA05M06r HA Hordeum vulgare subsp. v... 35 2.0
gb|BQ463778.1|BQ463778 HG01G13r HG Hordeum vulgare subsp. v... 35 2.0
gb|BQ464902.1|BQ464902 HU02B11r HU Hordeum vulgare subsp. v... 35 2.0
gb|BQ465611.1|BQ465611 HU04C17r HU Hordeum vulgare subsp. v... 35 2.0
gb|BQ466216.1|BQ466216 HT01O16T HT Hordeum vulgare subsp. v... 35 2.0
gb|BQ471969.1|BQ471969 HV04A12r HV Hordeum vulgare subsp. v... 35 2.0
gb|BQ472031.1|BQ472031 HV04D10r HV Hordeum vulgare subsp. v... 35 2.0
gb|BQ663137.1|BQ663137 HT01O16w HT Hordeum vulgare subsp. v... 35 2.0
gb|BQ663310.1|BQ663310 HU02B11u HU Hordeum vulgare subsp. v... 35 2.0
gb|BQ663636.1|BQ663636 HU03H03u HU Hordeum vulgare subsp. v... 35 2.0
gb|BQ663812.1|BQ663812 HU04C17u HU Hordeum vulgare subsp. v... 35 2.0
gb|BQ664599.1|BQ664599 HV04A12u HV Hordeum vulgare subsp. v... 35 2.0
gb|BQ664655.1|BQ664655 HV04D10u HV Hordeum vulgare subsp. v... 35 2.0
gb|BM373319.2|BM373319 EBma04_SQ004_A02_R maternal, 10 DPA,... 35 2.0
gb|BM373397.2|BM373397 EBma04_SQ004_E19_R maternal, 10 DPA,... 35 2.0
gb|BI780145.2|BI780145 EBma08_SQ001_I14_R maternal, 28 DPA,... 35 2.0
gb|BU971517.1|BU971517 HB17N19r BC Hordeum vulgare subsp. v... 35 2.0
gb|BU985654.1|BU985654 HF08D18r HF Hordeum vulgare subsp. v... 35 2.0
gb|BU996003.1|BU996003 HM12B05r HM Hordeum vulgare subsp. v... 35 2.0
gb|CA000084.1|CA000084 HS16E22u HS Hordeum vulgare subsp. v... 35 2.0
gb|CA000346.1|CA000346 HS08O19u HS Hordeum vulgare subsp. v... 35 2.0
gb|CA001495.1|CA001495 HS17K05u HS Hordeum vulgare subsp. v... 35 2.0
gb|CA001555.1|CA001555 HS17G21u HS Hordeum vulgare subsp. v... 35 2.0
gb|CA001558.1|CA001558 HS17H02u HS Hordeum vulgare subsp. v... 35 2.0
gb|CA004932.1|CA004932 HU12M10u HU Hordeum vulgare subsp. v... 35 2.0
gb|CA005063.1|CA005063 HU11O11u HU Hordeum vulgare subsp. v... 35 2.0
gb|CA005927.1|CA005927 HU05P15u HU Hordeum vulgare subsp. v... 35 2.0
gb|CA006034.1|CA006034 HU05K11u HU Hordeum vulgare subsp. v... 35 2.0
gb|CA006097.1|CA006097 HU05E10u HU Hordeum vulgare subsp. v... 35 2.0
gb|CA006114.1|CA006114 HU05F13u HU Hordeum vulgare subsp. v... 35 2.0
gb|CA006138.1|CA006138 HU05F17u HU Hordeum vulgare subsp. v... 35 2.0
gb|CA006225.1|CA006225 HU14O19u HU Hordeum vulgare subsp. v... 35 2.0
gb|CA006881.1|CA006881 HU05P15r HU Hordeum vulgare subsp. v... 35 2.0
gb|CA007914.1|CA007914 HU09F23r HU Hordeum vulgare subsp. v... 35 2.0
gb|CA007934.1|CA007934 HU09G21r HU Hordeum vulgare subsp. v... 35 2.0
gb|CA007981.1|CA007981 HU09I24r HU Hordeum vulgare subsp. v... 35 2.0
gb|CA009139.1|CA009139 HU13E13r HU Hordeum vulgare subsp. v... 35 2.0
gb|CA010426.1|CA010426 HT10D05u HT Hordeum vulgare subsp. v... 35 2.0
gb|CA011930.1|CA011930 HT03P03r HT Hordeum vulgare subsp. v... 35 2.0
gb|CA014037.1|CA014037 HT10D05r HT Hordeum vulgare subsp. v... 35 2.0
gb|CA020431.1|CA020431 HZ36E12r HZ Hordeum vulgare subsp. v... 35 2.0
gb|CA024043.1|CA024043 HZ48D06r HZ Hordeum vulgare subsp. v... 35 2.0
gb|CB874728.1|CB874728 HX06C08w HX Hordeum vulgare subsp. v... 35 2.0
gb|CB878081.1|CB878081 HP07E07T HP Hordeum vulgare subsp. v... 35 2.0
gb|CB883509.1|CB883509 HQ02H15w HQ Hordeum vulgare subsp. v... 35 2.0
gb|CA031896.1|CA031896 HX11H02r HX Hordeum vulgare subsp. v... 34 2.1
gb|BM373377.2|BM373377 EBma04_SQ004_D15_R maternal, 10 DPA,... 33 2.1
gb|BI951990.1|BI951990 HVSMEm0004C02f Hordeum vulgare green... 26 2.1
gb|BI948539.1|BI948539 HVSMEl0010A07f Hordeum vulgare spike... 29 2.1
gb|BE602339.3|BE602339 HVSMEh0098I23f Hordeum vulgare 5-45 ... 33 2.2
gb|BE601795.3|BE601795 HVSMEh0099I24f Hordeum vulgare 5-45 ... 33 2.2
gb|BG309101.2|BG309101 HVSMEc0002D06f Hordeum vulgare seedl... 26 2.2
gb|AV921530.1|AV921530 AV921530 K. Sato unpublished cDNA li... 29 2.3
gb|BQ458864.1|BQ458864 HA04A02r HA Hordeum vulgare subsp. v... 29 2.3
gb|BM374517.2|BM374517 EBpi03_SQ003_N13_R pistil, 4 DPA, no... 29 2.3
gb|BM368167.2|BM368167 EBed01_SQ002_F20_R endosperm, 6 DPA,... 28 2.3
gb|AV913917.1|AV913917 AV913917 K. Sato unpublished cDNA li... 29 2.3
gb|CA004566.1|CA004566 HS18A03r HS Hordeum vulgare subsp. v... 29 2.3
gb|BQ762559.1|BQ762559 EBro02_SQ004_D11_R root, 3 week, hyd... 29 2.3
gb|CV053876.1|CV053876 BNEL104b7 Barley EST endosperm libra... 33 2.4
gb|BG369092.1|BG369092 HVSMEi0021L05f Hordeum vulgare 20 DA... 30 2.4
gb|BI950541.1|BI950541 HVSMEl0021F01f Hordeum vulgare spike... 31 2.4
gb|BQ754310.1|BQ754310 EBca01_SQ003_I12_R carpel, pre-anthe... 33 2.5
gb|BQ468202.1|BQ468202 HP01G02T HP Hordeum vulgare subsp. v... 33 2.6
gb|BF267985.2|BF267985 HV_CEa0019I05f Hordeum vulgare seedl... 34 2.6
gb|BF255979.2|BF255979 HVSMEf0008G01f Hordeum vulgare seedl... 29 2.7
gb|BF261590.3|BF261590 HV_CEa0001K24f Hordeum vulgare seedl... 29 2.7
gb|BG310051.1|BG310051 HVSMEc0016D07f Hordeum vulgare seedl... 33 2.7
gb|BI777914.2|BI777914 EBro07_SQ001_E06_R root, 3 week, red... 33 2.7
gb|BE420844.1|BE420844 HWM003.B05 ITEC HWM Barley Leaf Libr... 34 2.8
gb|BE421417.1|BE421417 HWM009.B02 ITEC HWM Barley Leaf Libr... 34 2.8
gb|BE421875.1|BE421875 HWM015cG.11r ITEC HWM Barley Leaf Li... 34 2.8
gb|BE422147.1|BE422147 HWM020cF.10r ITEC HWM Barley Leaf Li... 34 2.8
gb|BF622275.2|BF622275 HVSMEa0002I01f Hordeum vulgare seedl... 34 2.8
gb|BF622278.2|BF622278 HVSMEa0002I04f Hordeum vulgare seedl... 34 2.8
gb|BF625524.2|BF625524 HVSMEa0011A04f Hordeum vulgare seedl... 34 2.8
gb|BG299509.1|BG299509 HVSMEa0020H22f Hordeum vulgare seedl... 34 2.8
gb|BG299742.1|BG299742 HVSMEa0021K02f Hordeum vulgare seedl... 34 2.8
gb|BF621776.3|BF621776 HVSMEa0012J21f Hordeum vulgare seedl... 34 2.8
gb|BG300171.1|BG300171 HVSMEb0010L03f Hordeum vulgare seedl... 34 2.8
gb|BG301338.1|BG301338 HVSMEb0020O04f Hordeum vulgare seedl... 34 2.8
gb|BF256941.2|BF256941 HVSMEf0011G23f Hordeum vulgare seedl... 34 2.8
gb|BG369515.1|BG369515 HVSMEi0024L09f Hordeum vulgare 20 DA... 34 2.8
gb|BI954031.1|BI954031 HVSMEm0015O19f Hordeum vulgare green... 34 2.8
gb|BI954453.1|BI954453 HVSMEm0017P23f Hordeum vulgare green... 34 2.8
gb|BI954522.1|BI954522 HVSMEm0018G16f Hordeum vulgare green... 34 2.8
gb|BI955533.1|BI955533 HVSMEm0023H20f Hordeum vulgare green... 34 2.8
gb|BI955808.1|BI955808 HVSMEm0024J21f Hordeum vulgare green... 34 2.8
gb|BI957169.1|BI957169 HVSMEn0007O12f Hordeum vulgare rachi... 34 2.8
gb|BI957255.1|BI957255 HVSMEn0008H08f Hordeum vulgare rachi... 34 2.8
gb|BF267110.2|BF267110 HV_CEa0016P17f Hordeum vulgare seedl... 34 2.8
gb|BI959263.1|BI959263 HVSMEn0018P12f Hordeum vulgare rachi... 34 2.8
gb|BI959924.1|BI959924 HVSMEn0022G14f Hordeum vulgare rachi... 34 2.8
gb|BF619010.3|BF619010 HVSMEc0008G09f Hordeum vulgare seedl... 34 2.8
gb|BF620670.3|BF620670 HVSMEc0020I16f Hordeum vulgare seedl... 34 2.8
gb|BE196355.3|BE196355 HVSMEh0092B05f Hordeum vulgare 5-45 ... 34 2.8
gb|BE455297.3|BE455297 HVSMEh0096P06f Hordeum vulgare 5-45 ... 34 2.8
gb|AV914644.1|AV914644 AV914644 K. Sato unpublished cDNA li... 34 2.8
gb|AV915272.1|AV915272 AV915272 K. Sato unpublished cDNA li... 34 2.8
gb|AV917858.1|AV917858 AV917858 K. Sato unpublished cDNA li... 34 2.8
gb|AV920719.1|AV920719 AV920719 K. Sato unpublished cDNA li... 34 2.8
gb|AV923391.1|AV923391 AV923391 K. Sato unpublished cDNA li... 34 2.8
gb|AV924438.1|AV924438 AV924438 K. Sato unpublished cDNA li... 34 2.8
gb|AV924984.1|AV924984 AV924984 K. Sato unpublished cDNA li... 34 2.8
gb|AV926935.1|AV926935 AV926935 K. Sato unpublished cDNA li... 34 2.8
gb|AV927488.1|AV927488 AV927488 K. Sato unpublished cDNA li... 34 2.8
gb|AV928217.1|AV928217 AV928217 K. Sato unpublished cDNA li... 34 2.8
>gb|BE454671.3|BE454671 HVSMEh0094P16f Hordeum vulgare 5-45 DAP spike EST library HVcDNA0009
(5 to 45 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEh0094P16f, mRNA sequence
Length = 685
Score = 430 bits (934), Expect = e-119
Identities = 173/227 (76%), Positives = 201/227 (88%)
Frame = +1 / +1
Query: 1072 SSVRMVISGAAPMGKELQDLLRAKLPRAVLGQGYGMTEAGPVLSMCMAFAKEPLPVKSGA 1251
+S+RMV+SGAAPMGKELQD AK+P AVLGQGYGMTEAGPVL+MC+AFAKEP VKSG+
Sbjct: 1 ASIRMVMSGAAPMGKELQDAFMAKIPNAVLGQGYGMTEAGPVLAMCLAFAKEPFKVKSGS 180
Query: 1252 CGTVVRNAELKIIDPETGLSLHRNQPGEICIRGKQLMKGYLNNPEATAKTIDSEGWLHTG 1431
CGTVVRNA LKI+DP+TG SL RNQPGEICIRG+Q+MKGYLN+PE+T TID +GWLHTG
Sbjct: 181 CGTVVRNAGLKIVDPDTGASLGRNQPGEICIRGEQIMKGYLNDPESTKNTIDKDGWLHTG 360
Query: 1432 DIGYVDDGDEIFIVDRLKELIKYKGFQVAPAELEAMLIAHPSIVDAAVVQMKDDSCGEIP 1611
DIG VDD DEIFIVDRLKE+IKYKGFQVAPAELEA+LI HP I DAAVV +KDD GE+P
Sbjct: 361 DIGIVDDDDEIFIVDRLKEIIKYKGFQVAPAELEALLITHPEIKDAAVVSLKDDLAGEVP 540
Query: 1612 VAFVVASGGSGITEDEIKQYVAKQVVFYKRLHKIFFVEAIPKAPSGK 1752
+AFV+ GS ITED+IK++VAK+VVFYKR+HK+FF ++IPK PSGK
Sbjct: 541 IAFVMRIEGSEITEDDIKKFVAKEVVFYKRIHKVFFTDSIPKNPSGK 681
Score = 317 bits (687), Expect = 1e-085
Identities = 149/226 (65%), Positives = 158/226 (69%)
Frame = -2 / -3
Query: 1751 LPDGALGMASTKKILCSLL*NTTCFATYCLISSSVIPEPPDATTNATGISPQESSFIWTT 1572
LP+G LG+ S KK L LL* TT FAT L+SSSVI EP T A G SP SSF TT
Sbjct: 680 LPEGFLGIESVKKTLWILL*KTTSFATNFLMSSSVISEPSIRITKAIGTSPARSSFSDTT 501
Query: 1571 AASTMLGWXXXXXXXXXXATWNPLYLMSSLSRSTMKISSPSSTYPMSPVCSHPSESMVFA 1392
AAS + GW ATW PLYLM SLS STMKISS SST PMSPVCS PS SMVF
Sbjct: 500 AASLISGWVMRRASSSAGATWKPLYLMISLSLSTMKISSSSSTMPMSPVCSQPSLSMVFL 321
Query: 1391 VASGLLRYPFINCLPLMQISPGWLRWRDSPVSGSMIFSSAFLTTVPQAPDFTGNGSLANA 1212
V SG LR PF+ C P MQISPGW R R++PVSGS I S A TTVP PD T NGSLANA
Sbjct: 320 VDSGSLR*PFMICSPRMQISPGWFRPREAPVSGSTILSPALRTTVPHDPDLTLNGSLANA 141
Query: 1211 MHIESTGPASVIP*PCPSTARGSLARSRSCSSLPMGAAPEMTMRTD 1074
H+ STGPASVIP PCPSTA G LA SCSSLPMGAAP+MTMR D
Sbjct: 140 RHMASTGPASVIPYPCPSTALGILAMKASCSSLPMGAAPDMTMRMD 3
Score = 149 bits (319), Expect(3) = 7e-051
Identities = 69/122 (56%), Positives = 81/122 (66%)
Frame = -1 / -2
Query: 1437 NVSGVQPPLRVDGLRRCLRVVEVPFHQLLAPDANLPGLVAVEGQPGLRVDDL*LGIPHHR 1258
+VSGVQP + VDG+ VV+V FH LL DA+L GLV EG G+ VDDL G+ HHR
Sbjct: 366 DVSGVQPAILVDGVLGGFWVVKVTFHDLLPADADLAGLVPAEGGAGVGVDDLEPGVAHHR 187
Query: 1257 AAGTGLHR*RLLGKRHAHREHRACLCHPITLSEHGARELGAQQVLQLLAHGRGPRDDHAH 1078
AA GL RLLG+R AH +HR L HP+ L EHG +LG + VLQLLAHGRG DHA
Sbjct: 186 AARPGLDLERLLGERQAHGQHRPGLRHPVPLPEHGVGDLGHEGVLQLLAHGRGAGHDHAD 7
Query: 1077 RR 1072
R
Sbjct: 6 GR 1
Score = 111 bits (236), Expect(3) = 1e-026
Identities = 49/82 (59%), Positives = 50/82 (60%)
Frame = +2 / +2
Query: 1085 WSSRGPRPWARSCRTCCAPSSLAPCSDRVMG*QRQARCSRCAWRLPRSRYR*SPVPAARW 1264
WS PRPWARSCRT P S PCS R G*+R RC CAWR PRSR R SP AARW
Sbjct: 14 WSCPAPRPWARSCRTPSWPRSPTPCSGRGTG*RRPGRCWPCAWRSPRSRSRSSPGRAARW 193
Query: 1265 *GMPS*RSSTRRPGCPSTATSP 1330
P RSST P PS TSP
Sbjct: 194 CATPGSRSSTPTPAPPSAGTSP 259
Score = 99.1 bits (210), Expect = 7e-020
Identities = 49/91 (53%), Positives = 55/91 (60%)
Frame = -3 / -1
Query: 1438 QCLRCAATPPSRWSSPLPPGC*GTLSSTACP*CKSPRAGCGGGTARSPGR*SLARHSSPP 1259
+CLRCAA+ P RW S G *G LS +A C+S RAG G G R GR S AR +PP
Sbjct: 367 RCLRCAASHPCRWCSWWILGR*GNLS*SAPRGCRSRRAGSGRGRRRCRGRRS*ARRCAPP 188
Query: 1258 CRRHRTSPVTAPWQTPCTSRAPGLPLSSHNP 1166
CR RT P TAPW+TP T AP P SS P
Sbjct: 187 CRTTRT*P*TAPWRTPGTWPAPARPPSSRTP 95
Score = 99.1 bits (210), Expect = 7e-020
Identities = 46/86 (53%), Positives = 57/86 (66%)
Frame = +3 / +3
Query: 1167 GLWDDRGRPGALDVHGVCQGAVTGEVRCLRHGGEECRAKDHRPGDRAVPPPQPARGDLHQ 1346
G+ DD GR GA V GV QGAV G+VR +RHGG + RA+D RP R +P P+PAR DLH
Sbjct: 96 GVRDDGGRAGAGHVPGVRQGAVQGQVRVVRHGGAQRRAQDRRPRHRRLPRPEPARRDLHP 275
Query: 1347 GQAVDERVPQQPGGNGEDHRLGGVAA 1424
A ER+P +P + E HR G +AA
Sbjct: 276 RGADHERLP*RPRIHQEHHRQGWLAA 353
Score = 62.9 bits (131), Expect(3) = 7e-051
Identities = 32/73 (43%), Positives = 42/73 (57%)
Frame = -1 / -2
Query: 1737 LGDGLHEEDLVQPLVEHHLFRHVLLDLVLGDPGAAGRHDERHRDLAAGVILHLXXXXXXX 1558
LGD + E+DLV PLVE++LFR D++LGD A H+E RD A+ ++L
Sbjct: 666 LGD*VGEKDLVDPLVENNLFRDEFFDVILGDFRAFDPHNEGDRDFASKIVLQRYDGGVLD 487
Query: 1557 XXXXDEHGLELRR 1519
DE GLEL R
Sbjct: 486 LRVGDEEGLELCR 448
Score = 29.0 bits (57), Expect(3) = 7e-051
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = -3 / -1
Query: 1534 PRAPPERLGTPCT**AP*A 1478
PRA P G+PCT**+P*A
Sbjct: 463 PRALPAPPGSPCT**SP*A 407
Score = 28.6 bits (56), Expect(3) = 1e-026
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +3 / +3
Query: 1479 AQGAHQVQGVPSRSGGA 1529
AQG HQVQG+P +G A
Sbjct: 408 AQGDHQVQGLPGGAGRA 458
Score = 25.4 bits (49), Expect(3) = 1e-026
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = +3 / +3
Query: 1662 QAVRGETGGVLQEAAQDLLRGGHPQGAIRQ 1751
Q +R E G LQE Q L +PQ RQ
Sbjct: 591 QKIRRERGCFLQEDPQGLFHRLNPQEPFRQ 680
>gb|BG344702.1|BG344702 HVSMEg0015E07f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0015E07f, mRNA sequence
Length = 875
Score = 409 bits (887), Expect(2) = e-115
Identities = 162/231 (70%), Positives = 197/231 (85%)
Frame = +1 / +1
Query: 823 DNPNLHFREDDVVLCVLPMFHVYSLHSILLCGMRAGAALVIMKRFDTLRMFELVKRHGIT 1002
+NPNL+FR++DV+LC+LP+FH+YSL+S+LL G+RAG+A+VIM++FD + ELV+ HGIT
Sbjct: 1 ENPNLYFRKEDVLLCLLPLFHIYSLNSVLLAGLRAGSAMVIMRKFDIGALVELVRAHGIT 180
Query: 1003 IVPLVLPIAVEMVKSDAIDRHDLSSVRMVISGAAPMGKELQDLLRAKLPRAVLGQGYGMT 1182
+ P V PI VE+ KS + DL+ +RMV+SGAAPMGKELQD AK+P AVLGQGYGMT
Sbjct: 181 VAPFVPPIVVEIAKSPQVTAGDLAXIRMVMSGAAPMGKELQDAFMAKIPNAVLGQGYGMT 360
Query: 1183 EAGPVLSMCMAFAKEPLPVKSGACGTVVRNAELKIIDPETGLSLHRNQPGEICIRGKQLM 1362
EAGPVL+MC+AFAKEP VKSG+CGTVVRNA LKI+DP+TG L RNQPGEICIRG+Q+M
Sbjct: 361 EAGPVLAMCLAFAKEPFKVKSGSCGTVVRNAGLKIVDPDTGXLLGRNQPGEICIRGEQIM 540
Query: 1363 KGYLNNPEATAKTIDSEGWLHTGDIGYVDDGDEIFIVDRLKELIKYKGFQV 1515
KGYLN+PE+T TID +GWLHTGDIG VDD DEIFIVDRLKE+IKYKG V
Sbjct: 541 KGYLNDPESTKNTIDKDGWLHTGDIGIVDDDDEIFIVDRLKEIIKYKGLXV 693
Score = 308 bits (668), Expect = 5e-083
Identities = 148/229 (64%), Positives = 154/229 (67%)
Frame = -2 / -1
Query: 1514 TWNPLYLMSSLSRSTMKISSPSSTYPMSPVCSHPSESMVFAVASGLLRYPFINCLPLMQI 1335
T PLYLM SLS STMKISS SST PMSPVCS PS SMVF V SG LR PF+ C P MQI
Sbjct: 692 T*RPLYLMISLSLSTMKISSSSSTMPMSPVCSQPSLSMVFLVDSGSLR*PFMICSPRMQI 513
Query: 1334 SPGWLRWRDSPVSGSMIFSSAFLTTVPQAPDFTGNGSLANAMHIESTGPASVIP*PCPST 1155
SPGW R R PVSGS I S A TTVP PD T NGSLANA H+ STGPASVIP PCPST
Sbjct: 512 SPGWFRPRRXPVSGSTILSPALRTTVPHDPDLTLNGSLANARHMASTGPASVIPYPCPST 333
Query: 1154 ARGSLARSRSCSSLPMGAAPEMTMRTDERSWRSMASLLTISTAMGSTSGTIVMPCLFTSS 975
A G LA SCSSLPMGAAP+MTMR RS LL IST MG T G VMPC TSS
Sbjct: 332 ALGILAMKASCSSLPMGAAPDMTMRMXARSPAVTWGLLAISTTMGGTKGATVMPCARTSS 153
Query: 974 NMRRVSKRFMITSAAPARIPHSRMECSEYTWNMGSTQRTTSSSRKWRFG 828
+S MIT A PAR P S E SE WN GS +TSS K+RFG
Sbjct: 152 TSAPMSNLRMITIADPARSPASSTELSE*MWNSGSRHSSTSSFLKYRFG 6
Score = 220 bits (475), Expect = 2e-056
Identities = 104/189 (55%), Positives = 118/189 (62%)
Frame = -1 / -3
Query: 1437 NVSGVQPPLRVDGLRRCLRVVEVPFHQLLAPDANLPGLVAVEGQPGLRVDDL*LGIPHHR 1258
+VSGVQP + VDG+ VV+V FH LL DA+L GLV E G+ VDDL G+ HHR
Sbjct: 615 DVSGVQPAILVDGVLGGFWVVKVTFHDLLPADADLAGLVPPEEAAGVGVDDLEPGVAHHR 436
Query: 1257 AAGTGLHR*RLLGKRHAHREHRACLCHPITLSEHGARELGAQQVLQLLAHGRGPRDDHAH 1078
AA GL RLLG+R AH +HR L HP+ L EHG +LG + VLQLLAHGRG DHA
Sbjct: 435 AARPGLDLERLLGERQAHGQHRPGLRHPVPLPEHGVGDLGHEGVLQLLAHGRGAGHDHAD 256
Query: 1077 RREVVAVDGVALDHLHRDGQHERHDRDAVPLHQLEHAESVEALHDHERRAGAHPAQQDGV 898
REV D AL LH DG+HE RDAV HQL VE HDH RR GA P QQ V
Sbjct: 255 XREVAGGDLGALGDLHHDGRHEGRHRDAVRAHQLHQRADVELAHDHHRRPGAQPRQQHRV 76
Query: 897 QRVHVEHGQ 871
+RV VE Q
Sbjct: 75 ERVDVEQRQ 49
Score = 107 bits (229), Expect = 2e-022
Identities = 48/82 (58%), Positives = 49/82 (59%)
Frame = +2 / +2
Query: 1085 WSSRGPRPWARSCRTCCAPSSLAPCSDRVMG*QRQARCSRCAWRLPRSRYR*SPVPAARW 1264
WS PRPWARSCRT P S PCS R G*+R RC CAWR PRSR R SP AARW
Sbjct: 263 WSCPAPRPWARSCRTPSWPRSPTPCSGRGTG*RRPGRCWPCAWRSPRSRSRSSPGRAARW 442
Query: 1265 *GMPS*RSSTRRPGCPSTATSP 1330
P RSST P S TSP
Sbjct: 443 CATPGSRSSTPTPAASSGGTSP 508
Score = 96.4 bits (204), Expect = 5e-019
Identities = 48/91 (52%), Positives = 54/91 (59%)
Frame = -3 / -2
Query: 1438 QCLRCAATPPSRWSSPLPPGC*GTLSSTACP*CKSPRAGCGGGTARSPGR*SLARHSSPP 1259
+CLRCAA+ P RW S G *G LS +A C+S RAG G R GR S AR +PP
Sbjct: 616 RCLRCAASHPCRWCSWWILGR*GNLS*SAPRGCRSRRAGSARGGXRCRGRRS*ARRCAPP 437
Query: 1258 CRRHRTSPVTAPWQTPCTSRAPGLPLSSHNP 1166
CR RT P TAPW+TP T AP P SS P
Sbjct: 436 CRTTRT*P*TAPWRTPGTWPAPARPPSSRTP 344
Score = 94.5 bits (200), Expect = 2e-018
Identities = 45/86 (52%), Positives = 55/86 (63%)
Frame = +3 / +3
Query: 1167 GLWDDRGRPGALDVHGVCQGAVTGEVRCLRHGGEECRAKDHRPGDRAVPPPQPARGDLHQ 1346
G+ DD GR GA V GV QGAV G+VR +RHGG + RA+D RP R P +PAR DLH
Sbjct: 345 GVRDDGGRAGAGHVPGVRQGAVQGQVRVVRHGGAQRRAQDRRPRHRXPPRAEPARRDLHP 524
Query: 1347 GQAVDERVPQQPGGNGEDHRLGGVAA 1424
A ER+P +P + E HR G +AA
Sbjct: 525 RGADHERLP*RPRIHQEHHRQGWLAA 602
Score = 29.5 bits (58), Expect(2) = e-115
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +1 / +2
Query: 1501 KGFQVAPAELEAMLIAHP 1554
+ F APAELEA LI HP
Sbjct: 680 RAFXWAPAELEAPLITHP 733
>gb|CK123691.1|CK123691 BES1824105b17 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010B175 5-PRIME, mRNA sequence
Length = 801
Score = 312 bits (676), Expect(2) = e-110
Identities = 126/177 (71%), Positives = 151/177 (85%)
Frame = +1 / +2
Query: 730 LPYSSGTTGLPKGVMLSHRGLVTSVAQLVDGDNPNLHFREDDVVLCVLPMFHVYSLHSIL 909
LPYSSGTTGLPKGVML+HR LVTSVAQ VDG+NPNL+F E+DVVLCVLP+FH+YSL+S+L
Sbjct: 98 LPYSSGTTGLPKGVMLTHRSLVTSVAQQVDGENPNLYFGEEDVVLCVLPLFHIYSLNSVL 277
Query: 910 LCGMRAGAALVIMKRFDTLRMFELVKRHGITIVPLVLPIAVEMVKSDAIDRHDLSSVRMV 1089
L G+RAG A+VIM++FD + LV+ HG+T+ P V PI VE+ KSD + DL+S+RMV
Sbjct: 278 LAGLRAGCAIVIMRKFDHGVLVRLVRAHGVTVAPFVPPIVVEIAKSDRVTAADLASIRMV 457
Query: 1090 ISGAAPMGKELQDLLRAKLPRAVLGQGYGMTEAGPVLSMCMAFAKEPLPVKSGACGT 1260
+SGAAPMGK+LQD AK+P AVLGQGYGMTEAGPVLSMC+AFAKEP VKSG+CGT
Sbjct: 458 MSGAAPMGKDLQDAFMAKIPNAVLGQGYGMTEAGPVLSMCLAFAKEPFAVKSGSCGT 628
Score = 228 bits (492), Expect(2) = 5e-077
Identities = 109/176 (61%), Positives = 116/176 (65%)
Frame = -2 / -1
Query: 1259 VPQAPDFTGNGSLANAMHIESTGPASVIP*PCPSTARGSLARSRSCSSLPMGAAPEMTMR 1080
VPQ PD T NGSLANA H++STGPASVIP PCPSTA G LA S SLPMGAAP+MTMR
Sbjct: 627 VPQDPDLTANGSLANARHMDSTGPASVIPYPCPSTALGILAMKASWRSLPMGAAPDMTMR 448
Query: 1079 TDERSWRSMASLLTISTAMGSTSGTIVMPCLFTSSNMRRVSKRFMITSAAPARIPHSRME 900
+ RS SLL IST MG T G V PC T S MIT A PAR P S E
Sbjct: 447 MEARSAAVTRSLLAISTTMGGTKGATVTPCARTRRTSTPWSNLRMITIAHPARSPASSTE 268
Query: 899 CSEYTWNMGSTQRTTSSSRKWRFGLSPSTSCATLVTSPRCDSITPLGSPVVPDEYG 732
SE WN GST TTSSS K++FG SPST ATLVT R S+TPLG PVVPDE G
Sbjct: 267 LSE*MWNSGSTHSTTSSSPKYKFGFSPSTCWATLVTRLRWVSMTPLGRPVVPDE*G 100
Score = 138 bits (296), Expect(2) = 6e-043
Identities = 66/131 (50%), Positives = 76/131 (58%)
Frame = -1 / -3
Query: 1260 RAAGTGLHR*RLLGKRHAHREHRACLCHPITLSEHGARELGAQQVLQLLAHGRGPRDDHA 1081
RAAG L RLLG+R AH +HR L HP+ LSEHG +LG + VL++LAHGRG DHA
Sbjct: 628 RAAGPRLDGERLLGERQAHGQHRPGLRHPVPLSEHGVGDLGHEGVLEVLAHGRGAGHDHA 449
Query: 1080 HRREVVAVDGVALDHLHRDGQHERHDRDAVPLHQLEHAESVEALHDHERRAGAHPAQQDG 901
EV VAL L DG+HE D V HQ VE HDH+R G P QQ
Sbjct: 448 DGGEVGGGHPVALGDLDDDGRHEGRHGDPVRAHQAHQHAVVELAHDHDRAPGPQPRQQHR 269
Query: 900 VQRVHVEHGQH 868
V+RV VE QH
Sbjct: 268 VERVDVEQRQH 236
Score = 109 bits (233), Expect(2) = e-110
Identities = 43/63 (68%), Positives = 49/63 (77%)
Frame = +1 / +3
Query: 1234 PVKSGACGTVVRNAELKIIDPETGLSLHRNQPGEICIRGKQLMKGYLNNPEATAKTIDSE 1413
P G VVRNAELKI+DP+TG SL RN PGEICIRGKQ+MKGYLN+PEAT T+ +
Sbjct: 603 PSSRGPAARVVRNAELKIVDPDTGASLARNWPGEICIRGKQIMKGYLNDPEATKNTLXKD 782
Query: 1414 GWL 1422
GWL
Sbjct: 783 GWL 791
Score = 81.7 bits (172), Expect(2) = 5e-077
Identities = 38/64 (59%), Positives = 42/64 (65%)
Frame = -2 / -3
Query: 1424 CSHPSESMVFAVASGLLRYPFINCLPLMQISPGWLRWRDSPVSGSMIFSSAFLTTVPQAP 1245
C+ PS VF VASG R PF+ CLP MQISPG LR R++PVSGS I SSAF TT P
Sbjct: 793 CNQPSXFNVFFVASGSFR*PFMICLPRMQISPGQLRAREAPVSGSTILSSAFRTTRAAGP 614
Query: 1244 DFTG 1233
G
Sbjct: 613 RLDG 602
Score = 80.8 bits (170), Expect(2) = 1e-024
Identities = 35/59 (59%), Positives = 37/59 (62%)
Frame = +2 / +3
Query: 1085 WSSRGPRPWARSCRTCCAPSSLAPCSDRVMG*QRQARCSRCAWRLPRSRYR*SPVPAAR 1261
WS PRPWAR+ RT P S PCSDR G*+R RC CAWR PRSR S PAAR
Sbjct: 453 WSCPAPRPWARTSRTPSWPRSPTPCSDRGTG*RRPGRCCPCAWRSPRSRSPSSRGPAAR 629
Score = 57.4 bits (119), Expect(2) = 6e-043
Identities = 27/55 (49%), Positives = 35/55 (63%)
Frame = -1 / -2
Query: 1425 VQPPLRVDGLRRCLRVVEVPFHQLLAPDANLPGLVAVEGQPGLRVDDL*LGIPHH 1261
+QP + + LR++ V FH LLA DA+LP VA EG G+ VDDL L +PHH
Sbjct: 794 LQPTILXQCVLCGLRII*VTFHDLLAADADLPRPVAGEGGAGVGVDDLELRVPHH 630
Score = 53.8 bits (111), Expect(2) = 1e-024
Identities = 26/55 (47%), Positives = 32/55 (58%)
Frame = +3 / +2
Query: 1260 GGEECRAKDHRPGDRAVPPPQPARGDLHQGQAVDERVPQQPGGNGEDHRLGGVAA 1424
GG E A+D RP R +P PQ A GDLH QA ER+P+ GG+ E G + A
Sbjct: 629 GGAERGAQDRRPRHRRLPRPQLAWGDLHPRQADHERLPK*SGGHKEHIEXGWLVA 793
Score = 50.1 bits (103), Expect(2) = 2e-012
Identities = 25/55 (45%), Positives = 29/55 (52%)
Frame = -3 / -1
Query: 1423 AATPPSRWSSPLPPGC*GTLSSTACP*CKSPRAGCGGGTARSPGR*SLARHSSPP 1259
A P S PP G LS +AC C+SP+A CG G R GR S A S+PP
Sbjct: 792 ATNHPXSMCSLWPPDHLGNLS*SACRGCRSPQASCGRGRRRCRGRRS*APRSAPP 628
Score = 46.0 bits (94), Expect(2) = 2e-005
Identities = 25/57 (43%), Positives = 29/57 (50%)
Frame = +3 / +1
Query: 1164 TGLWDDRGRPGALDVHGVCQGAVTGEVRCLRHGGEECRAKDHRPGDRAVPPPQPARG 1334
TG+ DD GR GA+ V GV QGAV +V LRHG R+ A P P G
Sbjct: 532 TGVRDDGGRAGAVHVPGVRQGAVRRQVGVLRHGWCGTRSSRSSTPTPAPPSPATGLG 702
Score = 43.2 bits (88), Expect(2) = 2e-012
Identities = 19/33 (57%), Positives = 20/33 (60%)
Frame = -3 / -2
Query: 1261 PCRRHRTSPVTAPWQTPCTSRAPGLPLSSHNPV 1163
PCRR T TAPW+TP T AP P SS PV
Sbjct: 629 PCRRTPT*RRTAPWRTPGTWTAPARPPSSRTPV 531
Score = 23.5 bits (45), Expect(2) = 2e-005
Identities = 9/23 (39%), Positives = 11/23 (47%)
Frame = +2 / +3
Query: 1085 WSSRGPRPWARSCRTCCAPSSLA 1153
W +R PW SCR + S A
Sbjct: 348 WCARTGSPWRPSCRPSSSRSPRA 416
>gb|BI956935.1|BI956935 HVSMEn0006D04f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0006D04f,
mRNA sequence
Length = 654
Score = 383 bits (830), Expect = e-105
Identities = 156/218 (71%), Positives = 181/218 (83%)
Frame = +1 / +1
Query: 979 LVKRHGITIVPLVLPIAVEMVKSDAIDRHDLSSVRMVISGAAPMGKELQDLLRAKLPRAV 1158
LV+ HGIT+ P V PI VE+ KS + DL+S+RMV+SGAAPMGKELQD AK+P AV
Sbjct: 1 LVRAHGITVAPFVPPIVVEIAKSPQVTAGDLASIRMVMSGAAPMGKELQDAFMAKIPNAV 180
Query: 1159 LGQGYGMTEAGPVLSMCMAFAKEPLPVKSGACGTVVRNAELKIIDPETGLSLHRNQPGEI 1338
LGQGYGMTEAGPVL+MC+AFAKEP VKSG+CGTVVRNA LKI+DP+TG SL RNQPGEI
Sbjct: 181 LGQGYGMTEAGPVLAMCLAFAKEPFKVKSGSCGTVVRNAGLKIVDPDTGASLGRNQPGEI 360
Query: 1339 CIRGKQLMKGYLNNPEATAKTIDSEGWLHTGDIGYVDDGDEIFIVDRLKELIKYKGFQVA 1518
CIRG+Q+MKGYLN+P++T TID +GWLHTGDIG VDD DEIFIVDRLKE+IKYKGFQVA
Sbjct: 361 CIRGEQIMKGYLNDPKSTKNTIDKDGWLHTGDIGIVDDDDEIFIVDRLKEIIKYKGFQVA 540
Query: 1519 PAELEAMLIAHPSIVDAAVVQMKDDSCGEIPVAFVVAS 1632
PA+LEA+LI HP I D VV +KDD E+P+ FV S
Sbjct: 541 PAKLEALLITHPEIQDXGVVFLKDDLACEVPIPFVCGS 654
Score = 289 bits (626), Expect = 3e-077
Identities = 136/217 (62%), Positives = 142/217 (65%)
Frame = -2 / -2
Query: 1631 DATTNATGISPQESSFIWTTAASTMLGWXXXXXXXXXXATWNPLYLMSSLSRSTMKISSP 1452
D T G S SSF TT S + GW ATW PLYLM SLS STMKISS
Sbjct: 653 DPHTKGIGTSQARSSFRNTTPXSWISGWVMRRASSFAGATWKPLYLMISLSLSTMKISSS 474
Query: 1451 SSTYPMSPVCSHPSESMVFAVASGLLRYPFINCLPLMQISPGWLRWRDSPVSGSMIFSSA 1272
SST PMSPVCS PS SMVF V G LR PF+ C P MQISPGW R R++PVSGS I S A
Sbjct: 473 SSTMPMSPVCSQPSLSMVFLVDFGSLR*PFMICSPRMQISPGWFRPREAPVSGSTILSPA 294
Query: 1271 FLTTVPQAPDFTGNGSLANAMHIESTGPASVIP*PCPSTARGSLARSRSCSSLPMGAAPE 1092
TTVP PD T NGSLANA H+ STGPASVIP PCPSTA G LA SCSSLPMGAAP+
Sbjct: 293 LRTTVPHDPDLTLNGSLANARHMASTGPASVIPYPCPSTALGILAMKASCSSLPMGAAPD 114
Query: 1091 MTMRTDERSWRSMASLLTISTAMGSTSGTIVMPCLFT 981
MTMR D RS LL IST MG T G VMPC T
Sbjct: 113 MTMRMDARSPAVTWGLLAISTTMGGTKGATVMPCART 3
Score = 183 bits (394), Expect(2) = 7e-048
Identities = 86/153 (56%), Positives = 99/153 (64%)
Frame = -1 / -1
Query: 1437 NVSGVQPPLRVDGLRRCLRVVEVPFHQLLAPDANLPGLVAVEGQPGLRVDDL*LGIPHHR 1258
+VSGVQP + VDG+ VV+V FH LL DA+L GLV EG G+ VDDL G+ HHR
Sbjct: 459 DVSGVQPAILVDGVLGGFWVVKVTFHDLLPADADLAGLVPAEGGAGVGVDDLEPGVAHHR 280
Query: 1257 AAGTGLHR*RLLGKRHAHREHRACLCHPITLSEHGARELGAQQVLQLLAHGRGPRDDHAH 1078
AA GL RLLG+R AH +HR L HP+ L EHG +LG + VLQLLAHGRG DHA
Sbjct: 279 AARPGLDLERLLGERQAHGQHRPGLRHPVPLPEHGVGDLGHEGVLQLLAHGRGAGHDHAD 100
Query: 1077 RREVVAVDGVALDHLHRDGQHERHDRDAVPLHQ 979
REV D AL LH DG+HE RDAV HQ
Sbjct: 99 GREVAGGDLGALGDLHHDGRHEGRHRDAVRAHQ 1
Score = 111 bits (236), Expect(2) = 4e-025
Identities = 49/82 (59%), Positives = 50/82 (60%)
Frame = +2 / +2
Query: 1085 WSSRGPRPWARSCRTCCAPSSLAPCSDRVMG*QRQARCSRCAWRLPRSRYR*SPVPAARW 1264
WS PRPWARSCRT P S PCS R G*+R RC CAWR PRSR R SP AARW
Sbjct: 107 WSCPAPRPWARSCRTPSWPRSPTPCSGRGTG*RRPGRCWPCAWRSPRSRSRSSPGRAARW 286
Query: 1265 *GMPS*RSSTRRPGCPSTATSP 1330
P RSST P PS TSP
Sbjct: 287 CATPGSRSSTPTPAPPSAGTSP 352
Score = 99.1 bits (210), Expect = 7e-020
Identities = 49/91 (53%), Positives = 55/91 (60%)
Frame = -3 / -3
Query: 1438 QCLRCAATPPSRWSSPLPPGC*GTLSSTACP*CKSPRAGCGGGTARSPGR*SLARHSSPP 1259
+CLRCAA+ P RW S G *G LS +A C+S RAG G G R GR S AR +PP
Sbjct: 460 RCLRCAASHPCRWCSWWILGR*GNLS*SAPRGCRSRRAGSGRGRRRCRGRRS*ARRCAPP 281
Query: 1258 CRRHRTSPVTAPWQTPCTSRAPGLPLSSHNP 1166
CR RT P TAPW+TP T AP P SS P
Sbjct: 280 CRTTRT*P*TAPWRTPGTWPAPARPPSSRTP 188
Score = 99.1 bits (210), Expect = 7e-020
Identities = 46/86 (53%), Positives = 57/86 (66%)
Frame = +3 / +3
Query: 1167 GLWDDRGRPGALDVHGVCQGAVTGEVRCLRHGGEECRAKDHRPGDRAVPPPQPARGDLHQ 1346
G+ DD GR GA V GV QGAV G+VR +RHGG + RA+D RP R +P P+PAR DLH
Sbjct: 189 GVRDDGGRAGAGHVPGVRQGAVQGQVRVVRHGGAQRRAQDRRPRHRRLPRPEPARRDLHP 368
Query: 1347 GQAVDERVPQQPGGNGEDHRLGGVAA 1424
A ER+P +P + E HR G +AA
Sbjct: 369 RGADHERLP*RPKIHQEHHRQGWLAA 446
Score = 29.0 bits (57), Expect(2) = 7e-048
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = -3 / -3
Query: 1534 PRAPPERLGTPCT**AP*A 1478
PRA P G+PCT**+P*A
Sbjct: 556 PRALPAPPGSPCT**SP*A 500
Score = 28.6 bits (56), Expect(2) = 4e-025
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +3 / +3
Query: 1479 AQGAHQVQGVPSRSGGA 1529
AQG HQVQG+P +G A
Sbjct: 501 AQGDHQVQGLPGGAGKA 551
>gb|BQ465081.1|BQ465081 HU02J12r HU Hordeum vulgare subsp. vulgare cDNA clone HU02J12
5-PRIME, mRNA sequence
Length = 633
Score = 375 bits (814), Expect = e-103
Identities = 152/207 (73%), Positives = 177/207 (85%)
Frame = +1 / +2
Query: 895 LHSILLCGMRAGAALVIMKRFDTLRMFELVKRHGITIVPLVLPIAVEMVKSDAIDRHDLS 1074
L+S+LL G+RAG A+VIM++FD + LV+ HG+T+ P V PI VE+ KSD + DL+
Sbjct: 11 LNSVLLAGLRAGCAIVIMRKFDHGVLVRLVRAHGVTVAPFVPPIVVEIAKSDRVTAADLA 190
Query: 1075 SVRMVISGAAPMGKELQDLLRAKLPRAVLGQGYGMTEAGPVLSMCMAFAKEPLPVKSGAC 1254
S+RMV+SGAAPMGK+LQD AK+P AVLGQGYGMTEAGPVLSMC+AFAKEP VKSG+C
Sbjct: 191 SIRMVMSGAAPMGKDLQDAFMAKIPNAVLGQGYGMTEAGPVLSMCLAFAKEPFAVKSGSC 370
Query: 1255 GTVVRNAELKIIDPETGLSLHRNQPGEICIRGKQLMKGYLNNPEATAKTIDSEGWLHTGD 1434
GTVVRNAELKI+DP+TG SL RN PGEICIRGKQ+MKGYLN+PEAT TID +GWLHTGD
Sbjct: 371 GTVVRNAELKIVDPDTGASLARNLPGEICIRGKQIMKGYLNDPEATKNTIDKDGWLHTGD 550
Query: 1435 IGYVDDGDEIFIVDRLKELIKYKGFQV 1515
IGYVDD DEIFIVDRLKE+IKYKGFQV
Sbjct: 551 IGYVDDDDEIFIVDRLKEIIKYKGFQV 631
Score = 287 bits (621), Expect = 1e-076
Identities = 136/207 (65%), Positives = 145/207 (70%)
Frame = -2 / -1
Query: 1514 TWNPLYLMSSLSRSTMKISSPSSTYPMSPVCSHPSESMVFAVASGLLRYPFINCLPLMQI 1335
TWNPLYL+ SLS STMKISS SST PMSPVC+ PS SMVF VASG R PF+ CLP MQI
Sbjct: 630 TWNPLYLIISLSLSTMKISSSSST*PMSPVCNQPSLSMVFFVASGSFR*PFMICLPRMQI 451
Query: 1334 SPGWLRWRDSPVSGSMIFSSAFLTTVPQAPDFTGNGSLANAMHIESTGPASVIP*PCPST 1155
SPG LR R++PVSGS I SSAF TTVPQ PD T NGSLANA H++STGPASVIP PCPST
Sbjct: 450 SPGRLRAREAPVSGSTILSSAFRTTVPQDPDLTANGSLANARHMDSTGPASVIPYPCPST 271
Query: 1154 ARGSLARSRSCSSLPMGAAPEMTMRTDERSWRSMASLLTISTAMGSTSGTIVMPCLFTSS 975
A G LA S SLPMGAAP+MTMR + RS SLL IST MG T G V PC T
Sbjct: 270 ALGILAMKASWRSLPMGAAPDMTMRMEARSAAVTRSLLAISTTMGGTKGATVTPCARTRR 91
Query: 974 NMRRVSKRFMITSAAPARIPHSRMECS 894
S MIT A PAR P S E S
Sbjct: 90 TSTPWSNLRMITIAHPARSPASSTELS 10
Score = 193 bits (415), Expect = 4e-048
Identities = 92/181 (50%), Positives = 111/181 (61%)
Frame = -1 / -3
Query: 1437 NVSGVQPPLRVDGLRRCLRVVEVPFHQLLAPDANLPGLVAVEGQPGLRVDDL*LGIPHHR 1258
+VS VQP + V+G+ LR++ V FH LLA DA+LP VA EG G+ VDDL L +PHHR
Sbjct: 553 DVSSVQPTILVNGVLCGLRII*VTFHDLLAADADLPRQVAGEGGAGVGVDDLELRVPHHR 374
Query: 1257 AAGTGLHR*RLLGKRHAHREHRACLCHPITLSEHGARELGAQQVLQLLAHGRGPRDDHAH 1078
AAG L RLLG+R AH +HR L HP+ LSEHG +LG + VL++LAHGRG DHA
Sbjct: 373 AAGPRLDGERLLGERQAHGQHRPGLRHPVPLSEHGVGDLGHEGVLEVLAHGRGAGHDHAD 194
Query: 1077 RREVVAVDGVALDHLHRDGQHERHDRDAVPLHQLEHAESVEALHDHERRAGAHPAQQDGV 898
EV VAL L DG+HE D V HQ VE HDH+R G P QQ V
Sbjct: 193 GGEVGGGHPVALGDLDDDGRHEGRHGDPVRAHQAHQHAVVELAHDHDRAPGPQPRQQHRV 14
Query: 897 Q 895
+
Sbjct: 13 E 11
Score = 106 bits (227), Expect = 3e-022
Identities = 48/92 (52%), Positives = 56/92 (60%)
Frame = -3 / -2
Query: 1438 QCLRCAATPPSRWSSPLPPGC*GTLSSTACP*CKSPRAGCGGGTARSPGR*SLARHSSPP 1259
+CL+CA P +W S PP G LS +AC C+SP+AGCG G R GR S A S+PP
Sbjct: 554 RCLQCATNHPCQWCSLWPPDHLGNLS*SACRGCRSPQAGCGRGRRRCRGRRS*APRSAPP 375
Query: 1258 CRRHRTSPVTAPWQTPCTSRAPGLPLSSHNPV 1163
CRR T TAPW+TP T AP P SS PV
Sbjct: 374 CRRTPT*RRTAPWRTPGTWTAPARPPSSRTPV 279
Score = 102 bits (218), Expect = 6e-021
Identities = 47/80 (58%), Positives = 49/80 (61%)
Frame = +2 / +3
Query: 1085 WSSRGPRPWARSCRTCCAPSSLAPCSDRVMG*QRQARCSRCAWRLPRSRYR*SPVPAARW 1264
WS PRPWAR+ RT P S PCSDR G*+R RC CAWR PRSR S PAARW
Sbjct: 201 WSCPAPRPWARTSRTPSWPRSPTPCSDRGTG*RRPGRCCPCAWRSPRSRSPSSRGPAARW 380
Query: 1265 *GMPS*RSSTRRPGCPSTAT 1324
G S RSST P PS AT
Sbjct: 381 CGTRSSRSSTPTPAPPSPAT 440
Score = 99.6 bits (211), Expect(2) = 3e-021
Identities = 47/87 (54%), Positives = 56/87 (64%)
Frame = +3 / +1
Query: 1164 TGLWDDRGRPGALDVHGVCQGAVTGEVRCLRHGGEECRAKDHRPGDRAVPPPQPARGDLH 1343
TG+ DD GR GA+ V GV QGAV +V LRHGG E A+D RP R +P PQPA GDLH
Sbjct: 280 TGVRDDGGRAGAVHVPGVRQGAVRRQVGVLRHGGAERGAQDRRPRHRRLPRPQPAWGDLH 459
Query: 1344 QGQAVDERVPQQPGGNGEDHRLGGVAA 1424
QA ER+P+ GG+ E H G + A
Sbjct: 460 PRQADHERLPK*SGGHKEHH*QGWLVA 540
Score = 23.5 bits (45), Expect(2) = 3e-021
Identities = 9/23 (39%), Positives = 11/23 (47%)
Frame = +2 / +3
Query: 1085 WSSRGPRPWARSCRTCCAPSSLA 1153
W +R PW SCR + S A
Sbjct: 96 WCARTGSPWRPSCRPSSSRSPRA 164
>gb|BQ763608.1|BQ763608 EBro02_SQ008_M23_R root, 3 week, hydroponic grown, low nitrogen, cv
Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone
EBro02_SQ008_M23 5', mRNA sequence
Length = 590
Score = 372 bits (807), Expect = e-102
Identities = 149/195 (76%), Positives = 173/195 (88%)
Frame = +1 / +3
Query: 1153 AVLGQGYGMTEAGPVLSMCMAFAKEPLPVKSGACGTVVRNAELKIIDPETGLSLHRNQPG 1332
AVLGQGYGMTEAGPVL+MC+AFAKEP VKSG+CGTVVRNA LKI+DP+TG SL RNQPG
Sbjct: 6 AVLGQGYGMTEAGPVLAMCLAFAKEPFKVKSGSCGTVVRNAGLKIVDPDTGASLGRNQPG 185
Query: 1333 EICIRGKQLMKGYLNNPEATAKTIDSEGWLHTGDIGYVDDGDEIFIVDRLKELIKYKGFQ 1512
EICIRG+Q+MKGYLN+PE+T TID +GWLHTGDIG VDD DEIFIVDRLKE+IKYKGFQ
Sbjct: 186 EICIRGEQIMKGYLNDPESTKNTIDKDGWLHTGDIGIVDDDDEIFIVDRLKEIIKYKGFQ 365
Query: 1513 VAPAELEAMLIAHPSIVDAAVVQMKDDSCGEIPVAFVVASGGSGITEDEIKQYVAKQVVF 1692
VAPAELEA+LI HP I DAAVV +KDD GE+P+AFV+ GS ITED+IK++VAK+ VF
Sbjct: 366 VAPAELEALLITHPEIKDAAVVSLKDDLAGEVPIAFVMRIEGSEITEDDIKKFVAKEGVF 545
Query: 1693 YKRLHKIFFVEAIPK 1737
YKR+HK+FF ++IPK
Sbjct: 546 YKRIHKVFFTDSIPK 590
Score = 264 bits (571), Expect = 1e-069
Identities = 126/195 (64%), Positives = 133/195 (68%)
Frame = -2 / -2
Query: 1736 LGMASTKKILCSLL*NTTCFATYCLISSSVIPEPPDATTNATGISPQESSFIWTTAASTM 1557
LG+ S KK L LL* T FAT L+SSSVI EP T A G SP SSF TTAAS +
Sbjct: 589 LGIESVKKTLWILL*KTPSFATNFLMSSSVISEPSIRITKAIGTSPARSSFSDTTAASLI 410
Query: 1556 LGWXXXXXXXXXXATWNPLYLMSSLSRSTMKISSPSSTYPMSPVCSHPSESMVFAVASGL 1377
GW ATW PLYLM SLS STMKISS SST PMSPVCS PS SMVF V SG
Sbjct: 409 SGWVMRRASSSAGATWKPLYLMISLSLSTMKISSSSSTMPMSPVCSQPSLSMVFLVDSGS 230
Query: 1376 LRYPFINCLPLMQISPGWLRWRDSPVSGSMIFSSAFLTTVPQAPDFTGNGSLANAMHIES 1197
LR PF+ C P MQISPGW R R++PVSGS I S A TTVP PD T NGSLANA H+ S
Sbjct: 229 LR*PFMICSPRMQISPGWFRPREAPVSGSTILSPALRTTVPHDPDLTLNGSLANARHMAS 50
Query: 1196 TGPASVIP*PCPSTA 1152
TGPASVIP PCPSTA
Sbjct: 49 TGPASVIPYPCPSTA 5
Score = 115 bits (245), Expect(3) = 4e-040
Identities = 53/95 (55%), Positives = 63/95 (66%)
Frame = -1 / -1
Query: 1437 NVSGVQPPLRVDGLRRCLRVVEVPFHQLLAPDANLPGLVAVEGQPGLRVDDL*LGIPHHR 1258
+VSGVQP + VDG+ VV+V FH LL DA+L GLV EG G+ VDDL G+ HHR
Sbjct: 290 DVSGVQPAILVDGVLGGFWVVKVTFHDLLPADADLAGLVPAEGGAGVGVDDLEPGVAHHR 111
Query: 1257 AAGTGLHR*RLLGKRHAHREHRACLCHPITLSEHG 1153
AA GL RLLG+R AH +HR L HP+ L EHG
Sbjct: 110 AARPGLDLERLLGERQAHGQHRPGLRHPVPLPEHG 6
Score = 99.1 bits (210), Expect = 7e-020
Identities = 49/91 (53%), Positives = 55/91 (60%)
Frame = -3 / -3
Query: 1438 QCLRCAATPPSRWSSPLPPGC*GTLSSTACP*CKSPRAGCGGGTARSPGR*SLARHSSPP 1259
+CLRCAA+ P RW S G *G LS +A C+S RAG G G R GR S AR +PP
Sbjct: 291 RCLRCAASHPCRWCSWWILGR*GNLS*SAPRGCRSRRAGSGRGRRRCRGRRS*ARRCAPP 112
Query: 1258 CRRHRTSPVTAPWQTPCTSRAPGLPLSSHNP 1166
CR RT P TAPW+TP T AP P SS P
Sbjct: 111 CRTTRT*P*TAPWRTPGTWPAPARPPSSRTP 19
Score = 99.1 bits (210), Expect(3) = 1e-022
Identities = 46/86 (53%), Positives = 57/86 (66%)
Frame = +3 / +2
Query: 1167 GLWDDRGRPGALDVHGVCQGAVTGEVRCLRHGGEECRAKDHRPGDRAVPPPQPARGDLHQ 1346
G+ DD GR GA V GV QGAV G+VR +RHGG + RA+D RP R +P P+PAR DLH
Sbjct: 20 GVRDDGGRAGAGHVPGVRQGAVQGQVRVVRHGGAQRRAQDRRPRHRRLPRPEPARRDLHP 199
Query: 1347 GQAVDERVPQQPGGNGEDHRLGGVAA 1424
A ER+P +P + E HR G +AA
Sbjct: 200 RGADHERLP*RPRIHQEHHRQGWLAA 277
Score = 77.1 bits (162), Expect = 3e-013
Identities = 35/59 (59%), Positives = 36/59 (61%)
Frame = +2 / +1
Query: 1154 PCSDRVMG*QRQARCSRCAWRLPRSRYR*SPVPAARW*GMPS*RSSTRRPGCPSTATSP 1330
PCS R G*+R RC CAWR PRSR R SP AARW P RSST P PS TSP
Sbjct: 7 PCSGRGTG*RRPGRCWPCAWRSPRSRSRSSPGRAARWCATPGSRSSTPTPAPPSAGTSP 183
Score = 60.6 bits (126), Expect(3) = 4e-040
Identities = 32/73 (43%), Positives = 40/73 (54%)
Frame = -1 / -1
Query: 1737 LGDGLHEEDLVQPLVEHHLFRHVLLDLVLGDPGAAGRHDERHRDLAAGVILHLXXXXXXX 1558
LGD + EEDLV PLVE+ L R D++LGD A H+E RD A+ ++L
Sbjct: 590 LGD*VGEEDLVDPLVENTLLRDEFFDVILGDFRAFDPHNEGDRDFASKIVLQRYDGGVLD 411
Query: 1557 XXXXDEHGLELRR 1519
DE GLEL R
Sbjct: 410 LRVGDEEGLELCR 372
Score = 29.0 bits (57), Expect(3) = 4e-040
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = -3 / -3
Query: 1534 PRAPPERLGTPCT**AP*A 1478
PRA P G+PCT**+P*A
Sbjct: 387 PRALPAPPGSPCT**SP*A 331
Score = 28.6 bits (56), Expect(3) = 1e-022
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +3 / +2
Query: 1479 AQGAHQVQGVPSRSGGA 1529
AQG HQVQG+P +G A
Sbjct: 332 AQGDHQVQGLPGGAGRA 382
Score = 23.5 bits (45), Expect(3) = 1e-022
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +3 / +2
Query: 1662 QAVRGETGGVLQEAAQDLLRGGHPQ 1736
Q +R E G LQE Q LL +PQ
Sbjct: 515 QKIRREGGCFLQEDPQGLLHRLNPQ 589
>gb|BQ766207.1|BQ766207 EBro08_SQ005_H07_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ005_H07 5', mRNA sequence
Length = 552
Score = 345 bits (747), Expect = 6e-094
Identities = 140/183 (76%), Positives = 159/183 (86%)
Frame = +1 / +3
Query: 1120 LQDLLRAKLPRAVLGQGYGMTEAGPVLSMCMAFAKEPLPVKSGACGTVVRNAELKIIDPE 1299
LQD AK+P AVLGQGYGMTEAGPVL+MC+AFAKEP VKSG+CGTVVRNA LKI+DP+
Sbjct: 3 LQDAFMAKIPNAVLGQGYGMTEAGPVLAMCLAFAKEPFKVKSGSCGTVVRNAGLKIVDPD 182
Query: 1300 TGLSLHRNQPGEICIRGKQLMKGYLNNPEATAKTIDSEGWLHTGDIGYVDDGDEIFIVDR 1479
TG SL RNQPGEICIRG+Q+MKGYLN+PE+T TID +GWLHTGDIG VDD DEIFIVDR
Sbjct: 183 TGASLGRNQPGEICIRGEQIMKGYLNDPESTKNTIDKDGWLHTGDIGIVDDDDEIFIVDR 362
Query: 1480 LKELIKYKGFQVAPAELEAMLIAHPSIVDAAVVQMKDDSCGEIPVAFVVASGGSGITEDE 1659
LKE+IKYKGFQVAPAELEA+LI HP I DAAVV +KDD GE+P+AFV+ GS ITED+
Sbjct: 363 LKEIIKYKGFQVAPAELEALLITHPEIKDAAVVSLKDDLAGEVPIAFVMRIEGSEITEDD 542
Query: 1660 IKQ 1668
IK+
Sbjct: 543 IKK 551
Score = 254 bits (550), Expect = 9e-067
Identities = 119/182 (65%), Positives = 125/182 (68%)
Frame = -2 / -3
Query: 1664 LISSSVIPEPPDATTNATGISPQESSFIWTTAASTMLGWXXXXXXXXXXATWNPLYLMSS 1485
L+SSSVI EP T A G SP SSF TTAAS + GW ATW PLYLM S
Sbjct: 547 LMSSSVISEPSIRITKAIGTSPARSSFSDTTAASLISGWVMRRASSSAGATWKPLYLMIS 368
Query: 1484 LSRSTMKISSPSSTYPMSPVCSHPSESMVFAVASGLLRYPFINCLPLMQISPGWLRWRDS 1305
LS STMKISS SST PMSPVCS PS SMVF V SG LR PF+ C P MQISPGW R R++
Sbjct: 367 LSLSTMKISSSSSTMPMSPVCSQPSLSMVFLVDSGSLR*PFMICSPRMQISPGWFRPREA 188
Query: 1304 PVSGSMIFSSAFLTTVPQAPDFTGNGSLANAMHIESTGPASVIP*PCPSTARGSLARSRS 1125
PVSGS I S A TTVP PD T NGSLANA H+ STGPASVIP PCPSTA G LA S
Sbjct: 187 PVSGSTILSPALRTTVPHDPDLTLNGSLANARHMASTGPASVIPYPCPSTALGILAMKAS 8
Query: 1124 CS 1119
CS
Sbjct: 7 CS 2
Score = 124 bits (266), Expect(3) = 7e-035
Identities = 58/106 (54%), Positives = 70/106 (66%)
Frame = -1 / -2
Query: 1437 NVSGVQPPLRVDGLRRCLRVVEVPFHQLLAPDANLPGLVAVEGQPGLRVDDL*LGIPHHR 1258
+VSGVQP + VDG+ VV+V FH LL DA+L GLV EG G+ VDDL G+ HHR
Sbjct: 320 DVSGVQPAILVDGVLGGFWVVKVTFHDLLPADADLAGLVPAEGGAGVGVDDLEPGVAHHR 141
Query: 1257 AAGTGLHR*RLLGKRHAHREHRACLCHPITLSEHGARELGAQQVLQ 1120
AA GL RLLG+R AH +HR L HP+ L EHG +LG + VLQ
Sbjct: 140 AARPGLDLERLLGERQAHGQHRPGLRHPVPLPEHGVGDLGHEGVLQ 3
Score = 99.1 bits (210), Expect = 7e-020
Identities = 49/91 (53%), Positives = 55/91 (60%)
Frame = -3 / -1
Query: 1438 QCLRCAATPPSRWSSPLPPGC*GTLSSTACP*CKSPRAGCGGGTARSPGR*SLARHSSPP 1259
+CLRCAA+ P RW S G *G LS +A C+S RAG G G R GR S AR +PP
Sbjct: 321 RCLRCAASHPCRWCSWWILGR*GNLS*SAPRGCRSRRAGSGRGRRRCRGRRS*ARRCAPP 142
Query: 1258 CRRHRTSPVTAPWQTPCTSRAPGLPLSSHNP 1166
CR RT P TAPW+TP T AP P SS P
Sbjct: 141 CRTTRT*P*TAPWRTPGTWPAPARPPSSRTP 49
Score = 99.1 bits (210), Expect(2) = 1e-022
Identities = 46/86 (53%), Positives = 57/86 (66%)
Frame = +3 / +2
Query: 1167 GLWDDRGRPGALDVHGVCQGAVTGEVRCLRHGGEECRAKDHRPGDRAVPPPQPARGDLHQ 1346
G+ DD GR GA V GV QGAV G+VR +RHGG + RA+D RP R +P P+PAR DLH
Sbjct: 50 GVRDDGGRAGAGHVPGVRQGAVQGQVRVVRHGGAQRRAQDRRPRHRRLPRPEPARRDLHP 229
Query: 1347 GQAVDERVPQQPGGNGEDHRLGGVAA 1424
A ER+P +P + E HR G +AA
Sbjct: 230 RGADHERLP*RPRIHQEHHRQGWLAA 307
Score = 87.7 bits (185), Expect = 2e-016
Identities = 41/71 (57%), Positives = 42/71 (59%)
Frame = +2 / +1
Query: 1118 SCRTCCAPSSLAPCSDRVMG*QRQARCSRCAWRLPRSRYR*SPVPAARW*GMPS*RSSTR 1297
SCRT P S PCS R G*+R RC CAWR PRSR R SP AARW P RSST
Sbjct: 1 SCRTPSWPRSPTPCSGRGTG*RRPGRCWPCAWRSPRSRSRSSPGRAARWCATPGSRSSTP 180
Query: 1298 RPGCPSTATSP 1330
P PS TSP
Sbjct: 181 TPAPPSAGTSP 213
Score = 33.1 bits (66), Expect(3) = 7e-035
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = -1 / -2
Query: 1662 DLVLGDPGAAGRHDERHRDLAAGVILHLXXXXXXXXXXXDEHGLELRR 1519
D++LGD A H+E RD A+ ++L DE GLEL R
Sbjct: 545 DVILGDFRAFDPHNEGDRDFASKIVLQRYDGGVLDLRVGDEEGLELCR 402
Score = 29.0 bits (57), Expect(3) = 7e-035
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = -3 / -1
Query: 1534 PRAPPERLGTPCT**AP*A 1478
PRA P G+PCT**+P*A
Sbjct: 417 PRALPAPPGSPCT**SP*A 361
Score = 28.6 bits (56), Expect(2) = 1e-022
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +3 / +2
Query: 1479 AQGAHQVQGVPSRSGGA 1529
AQG HQVQG+P +G A
Sbjct: 362 AQGDHQVQGLPGGAGRA 412
>gb|CK124865.1|CK124865 BES1824110k15 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010K1510 5-PRIME, mRNA sequence
Length = 630
Score = 340 bits (737), Expect = 1e-092
Identities = 138/186 (74%), Positives = 160/186 (86%)
Frame = +1 / +1
Query: 1195 VLSMCMAFAKEPLPVKSGACGTVVRNAELKIIDPETGLSLHRNQPGEICIRGKQLMKGYL 1374
VLSMC AFA+EP P KSG+CGTVVRNAELK++DP+TGLSL RN PGEICIRG Q+MKGYL
Sbjct: 19 VLSMCPAFAREPTPAKSGSCGTVVRNAELKVVDPDTGLSLARNLPGEICIRGPQIMKGYL 198
Query: 1375 NNPEATAKTIDSEGWLHTGDIGYVDDGDEIFIVDRLKELIKYKGFQVAPAELEAMLIAHP 1554
++P ATA TID EGWLHTGDIGYVDD DE+FIVDR+KELIK+KGFQV PAELEA+LIAHP
Sbjct: 199 DDPVATAATIDVEGWLHTGDIGYVDDDDEVFIVDRVKELIKFKGFQVPPAELEALLIAHP 378
Query: 1555 SIVDAAVVQMKDDSCGEIPVAFVVASGGSGITEDEIKQYVAKQVVFYKRLHKIFFVEAIP 1734
SI DAAVV KDD+ GE+PVAFVV + S I E+ IK++V+KQVVFYKRLHK++F AIP
Sbjct: 379 SIADAAVVPQKDDAAGEVPVAFVVRAADSDIAEEAIKEFVSKQVVFYKRLHKVYFTHAIP 558
Query: 1735 KAPSGK 1752
K G+
Sbjct: 559 KFGVGE 576
Score = 228 bits (493), Expect = 7e-059
Identities = 112/185 (60%), Positives = 121/185 (65%)
Frame = -2 / -2
Query: 1748 PDGALGMASTKKILCSLL*NTTCFATYCLISSSVIPEPPDATTNATGISPQESSFIWTTA 1569
P LG+A K LCSLL*NTTC T L++SS + E TTNATG SP SSF TTA
Sbjct: 572 PTPNLGIAWVKYTLCSLL*NTTCLDTNSLMASSAMSESAARTTNATGTSPAASSFCGTTA 393
Query: 1568 ASTMLGWXXXXXXXXXXATWNPLYLMSSLSRSTMKISSPSSTYPMSPVCSHPSESMVFAV 1389
AS M G TW PL LMSSL+RSTMK SS SST PMSPV SHPS SMV AV
Sbjct: 392 ASAMEGCAMSRASSSAGGTWKPLNLMSSLTRSTMKTSSSSST*PMSPVWSHPSTSMVAAV 213
Query: 1388 ASGLLRYPFINCLPLMQISPGWLRWRDSPVSGSMIFSSAFLTTVPQAPDFTGNGSLANAM 1209
A+G R PF+ C P MQISPG LR RD PVSGS SSA TTVP PD G GSLANA
Sbjct: 212 ATGSSR*PFMICGPRMQISPGRLRARDRPVSGSTTLSSALRTTVPHDPDLAGVGSLANAG 33
Query: 1208 HIEST 1194
H++ST
Sbjct: 32 HMDST 18
Score = 105 bits (225), Expect(2) = 1e-037
Identities = 55/113 (48%), Positives = 64/113 (56%)
Frame = -3 / -3
Query: 1543 *AWPRAPPERLGTPCT**AP*AGXXXXXXXXXXRTQCLRCAATPPSRWSSPLPPGC*GTL 1364
*A P A P G+P T**AP* G R++C RC ATP RWS P G G+L
Sbjct: 367 *AEPPARPAAPGSP*T**AP*RGRR*RPRRRRRRSRCRRCGATPRRRWSRRWPRGRPGSL 188
Query: 1363 SSTACP*CKSPRAGCGGGTARSPGR*SLARHSSPPCRRHRTSPVTAPWQTPCT 1205
S +A C+S R GCG GT PGR A +PPCR RT P +APW+TP T
Sbjct: 187 S*SAGRGCRSRRGGCGRGTGPCPGRPP*APRCAPPCRTTRTWPASAPWRTPGT 29
Score = 92.3 bits (195), Expect = 9e-018
Identities = 45/81 (55%), Positives = 54/81 (66%)
Frame = -1 / -1
Query: 1437 NVSGVQPPLRVDGLRRCLRVVEVPFHQLLAPDANLPGLVAVEGQPGLRVDDL*LGIPHHR 1258
+V+GV+PPL VDG VV+V FH L A DA+L G VA EGQ +RVD L L + HHR
Sbjct: 261 DVAGVEPPLDVDGRGGGHGVVQVAFHDLRAADADLAGEVAGEGQARVRVDHLELRVAHHR 82
Query: 1257 AAGTGLHR*RLLGKRHAHREH 1195
AA GL R RL G+R AH +H
Sbjct: 81 AARPGLGRRRLPGERRAHGQH 19
Score = 84.9 bits (179), Expect(3) = 2e-022
Identities = 39/75 (52%), Positives = 47/75 (62%)
Frame = +3 / +3
Query: 1197 ALDVHGVCQGAVTGEVRCLRHGGEECRAKDHRPGDRAVPPPQPARGDLHQGQAVDERVPQ 1376
A+ V GV QGA G+VR +RHGG + A+ RPG VP PQP R DLH A ER+P
Sbjct: 21 AVHVPGVRQGADAGQVRVVRHGGAQRGAQGGRPGHGPVPRPQPPRRDLHPRPADHERLPG 200
Query: 1377 QPGGNGEDHRLGGVA 1421
+P G+ DHR GVA
Sbjct: 201 RPRGHRRDHRRRGVA 245
Score = 72.1 bits (151), Expect(2) = 1e-037
Identities = 32/51 (62%), Positives = 35/51 (68%)
Frame = -1 / -1
Query: 1737 LGDGLHEEDLVQPLVEHHLFRHVLLDLVLGDPGAAGRHDERHRDLAAGVIL 1585
LGD + E LVQPLVEHHL + LLD +LGD G H ERHRDL GVIL
Sbjct: 561 LGDRVGEVHLVQPLVEHHLLGYELLDGLLGDVRIGGAHHERHRDLTGGVIL 409
Score = 52.4 bits (108), Expect = 9e-006
Identities = 26/48 (54%), Positives = 28/48 (58%)
Frame = +2 / +2
Query: 1187 QARCSRCAWRLPRSRYR*SPVPAARW*GMPS*RSSTRRPGCPSTATSP 1330
++ C CA R P SR R SP AARW S R STR CPS ATSP
Sbjct: 11 RSACCPCARRSPGSRRRPSPGRAARWCATRSSRWSTRTRACPSPATSP 154
Score = 34.1 bits (68), Expect = 2.8
Identities = 19/55 (34%), Positives = 25/55 (45%)
Frame = +2 / +2
Query: 1088 SSRGPRPWARSCRTCCAPSSLAPCSDRVMG*QRQARCSRCAWRLPRSRYR*SPVP 1252
+SRG A S + S + + R R +RC R +WRL SR SP P
Sbjct: 230 TSRGGSTPATSATSTTTTRSSSSTASRSSSSSRASRCRRPSWRLCSSRIPPSPTP 394
Score = 33.1 bits (66), Expect(3) = 2e-022
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = +3 / +3
Query: 1662 QAVRGETGGVLQEAAQDLLRGGHPQ 1736
Q VR + GGVLQEAAQ +L PQ
Sbjct: 486 QGVRIQAGGVLQEAAQGVLHPRDPQ 560
Score = 32.7 bits (65), Expect(3) = 2e-022
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +3 / +3
Query: 1476 PAQGAHQVQGVPSRSGGA 1529
P QGAHQVQG+P +G A
Sbjct: 300 PRQGAHQVQGLPGAAGRA 353
>gb|BE215262.2|BE215262 HV_CEb0006F04f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0006F04f, mRNA sequence
Length = 476
Score = 337 bits (731), Expect = 1e-091
Identities = 139/158 (87%), Positives = 148/158 (93%)
Frame = +1 / +3
Query: 826 NPNLHFREDDVVLCVLPMFHVYSLHSILLCGMRAGAALVIMKRFDTLRMFELVKRHGITI 1005
NPNLH REDDVVLCVLPMFHVYSLHSILLCG+RAGAALV+MKRFDT++M ELV+RHGITI
Sbjct: 3 NPNLHLREDDVVLCVLPMFHVYSLHSILLCGLRAGAALVVMKRFDTVKMMELVERHGITI 182
Query: 1006 VPLVLPIAVEMVKSDAIDRHDLSSVRMVISGAAPMGKELQDLLRAKLPRAVLGQGYGMTE 1185
PLV PI VEM K DA+DRHDLSSVRMVISGAAPMGKELQD++ AKLP AVLGQGYGMTE
Sbjct: 183 APLVPPIVVEMAKGDAMDRHDLSSVRMVISGAAPMGKELQDIIHAKLPNAVLGQGYGMTE 362
Query: 1186 AGPVLSMCMAFAKEPLPVKSGACGTVVRNAELKIIDPE 1299
AGPVLSMCMAFAKEP PVKSGACGTVVRNAELKI+DPE
Sbjct: 363 AGPVLSMCMAFAKEPSPVKSGACGTVVRNAELKIVDPE 476
Score = 289 bits (626), Expect = 3e-077
Identities = 127/158 (80%), Positives = 133/158 (84%)
Frame = -2 / -2
Query: 1298 SGSMIFSSAFLTTVPQAPDFTGNGSLANAMHIESTGPASVIP*PCPSTARGSLARSRSCS 1119
SGS I SSAFLTTVP APDFTG+GSLANAMHI+STGPASVIP*PCPSTA GSLA SCS
Sbjct: 475 SGSTILSSAFLTTVPHAPDFTGDGSLANAMHIDSTGPASVIP*PCPSTALGSLAWMMSCS 296
Query: 1118 SLPMGAAPEMTMRTDERSWRSMASLLTISTAMGSTSGTIVMPCLFTSSNMRRVSKRFMIT 939
SLPMGAAPEMTMRT+ERSWRSMAS L IST MG TSG +VMP TSS + VSKRFM T
Sbjct: 295 SLPMGAAPEMTMRTEERSWRSMASPLAISTTMGGTSGAMVMPWRSTSSIILTVSKRFMTT 116
Query: 938 SAAPARIPHSRMECSEYTWNMGSTQRTTSSSRKWRFGL 825
AAPAR P SRMECSE TWNMGSTQ TTSSSR+WR GL
Sbjct: 115 RAAPARSPQSRMECSE*TWNMGSTQSTTSSSRRWRLGL 2
Score = 241 bits (521), Expect = 9e-063
Identities = 102/144 (70%), Positives = 110/144 (76%)
Frame = -1 / -1
Query: 1299 LRVDDL*LGIPHHRAAGTGLHR*RLLGKRHAHREHRACLCHPITLSEHGARELGAQQVLQ 1120
LRVDDL L +P+HRAA LHR RL G+RHAHR+HR CLCHPI LSEHG ELG VLQ
Sbjct: 476 LRVDDLELRVPYHRAACA*LHRRRLFGERHAHRQHRTCLCHPIALSEHGIGELGVDDVLQ 297
Query: 1119 LLAHGRGPRDDHAHRREVVAVDGVALDHLHRDGQHERHDRDAVPLHQLEHAESVEALHDH 940
LLAHGRG DDHA EVVAV GVAL HL DG+HER D DAV LHQL H + VEALHD
Sbjct: 296 LLAHGRGAGDDHADGGEVVAVHGVALGHLDDDGRHERRDGDAVALHQLHHLDRVEALHDD 117
Query: 939 ERRAGAHPAQQDGVQRVHVEHGQH 868
E AGA PA+QDGVQRV VEHG+H
Sbjct: 116 EGGAGAQPAEQDGVQRVDVEHGEH 45
Score = 124 bits (265), Expect(3) = 2e-036
Identities = 52/71 (73%), Positives = 53/71 (74%)
Frame = +2 / +1
Query: 1085 WSSRGPRPWARSCRTCCAPSSLAPCSDRVMG*QRQARCSRCAWRLPRSRYR*SPVPAARW 1264
WSS PRPWARSCRT PSS PCSDR MG*QRQ RC RCAWR P+SR R*S AARW
Sbjct: 262 WSSPAPRPWARSCRTSSTPSSPMPCSDRAMG*QRQVRCCRCAWRSPKSRRR*SQAHAARW 441
Query: 1265 *GMPS*RSSTR 1297
*G S RSSTR
Sbjct: 442 *GTRSSRSSTR 474
Score = 82.6 bits (174), Expect = 7e-015
Identities = 33/45 (73%), Positives = 37/45 (82%)
Frame = +3 / +2
Query: 1164 TGLWDDRGRPGALDVHGVCQGAVTGEVRCLRHGGEECRAKDHRPG 1298
TGLWDDRGR GA+DVHGV Q AV GEVR +RHGG+E A+D RPG
Sbjct: 341 TGLWDDRGRSGAVDVHGVRQRAVAGEVRRMRHGGKERGAQDRRPG 475
Score = 75.8 bits (159), Expect = 8e-013
Identities = 31/45 (68%), Positives = 33/45 (73%)
Frame = -3 / -3
Query: 1297 PGR*SLARHSSPPCRRHRTSPVTAPWQTPCTSRAPGLPLSSHNPV 1163
PGR S A S PPCR TSP TA W+TPCTS AP LPLSSH+PV
Sbjct: 474 PGRRS*APRSLPPCRMRLTSPATALWRTPCTSTAPDLPLSSHSPV 340
Score = 42.3 bits (86), Expect(3) = 2e-036
Identities = 17/29 (58%), Positives = 19/29 (65%)
Frame = +3 / +2
Query: 876 HVPRVLAALHPAVXXXXXXXXXXHEALRH 962
HVPR+LAALHPA+ HEALRH
Sbjct: 53 HVPRLLAALHPALRAARRRRPRRHEALRH 139
Score = 25.8 bits (50), Expect(3) = 2e-036
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +3 / +2
Query: 1041 QERRHRPPRPLV 1076
Q RRH PPRPL+
Sbjct: 218 QGRRHGPPRPLL 253
>gb|AL510457.1|AL510457 AL510457 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY04P21u 3',
mRNA sequence
Length = 508
Score = 327 bits (709), Expect = 1e-088
Identities = 132/168 (78%), Positives = 149/168 (88%)
Frame = +1 / +1
Query: 1126 DLLRAKLPRAVLGQGYGMTEAGPVLSMCMAFAKEPLPVKSGACGTVVRNAELKIIDPETG 1305
D LR +LP+A+ GQGYGMTEAGPVLSMC AFA+EP P KSG+CGTVVRNAELK++DP+TG
Sbjct: 1 DALRGRLPQAIFGQGYGMTEAGPVLSMCPAFAREPTPAKSGSCGTVVRNAELKVVDPDTG 180
Query: 1306 LSLHRNQPGEICIRGKQLMKGYLNNPEATAKTIDSEGWLHTGDIGYVDDGDEIFIVDRLK 1485
LSL RN PGEICIRG Q+MKGYL++P ATA TID EGWLHTGDIGYVDD DE+FIVDR+K
Sbjct: 181 LSLARNLPGEICIRGPQIMKGYLDDPVATAATIDVEGWLHTGDIGYVDDDDEVFIVDRVK 360
Query: 1486 ELIKYKGFQVAPAELEAMLIAHPSIVDAAVVQMKDDSCGEIPVAFVVA 1629
ELIK+KGFQV PAELEA+LIAHPSI DAAVV KDD+ GE+PVAFV A
Sbjct: 361 ELIKFKGFQVPPAELEALLIAHPSIADAAVVPQKDDAAGEVPVAFVGA 504
Score = 221 bits (476), Expect = 1e-056
Identities = 106/166 (63%), Positives = 111/166 (66%)
Frame = -2 / -3
Query: 1628 ATTNATGISPQESSFIWTTAASTMLGWXXXXXXXXXXATWNPLYLMSSLSRSTMKISSPS 1449
A TNATG SP SSF TTAAS M G TW PL LMSSL+RSTMK SS S
Sbjct: 503 APTNATGTSPAASSFCGTTAASAMEGCAMSRASSSAGGTWKPLNLMSSLTRSTMKTSSSS 324
Query: 1448 STYPMSPVCSHPSESMVFAVASGLLRYPFINCLPLMQISPGWLRWRDSPVSGSMIFSSAF 1269
ST PMSPV SHPS SMV AVA+G R PF+ C P MQISPG LR RD PVSGS SSA
Sbjct: 323 ST*PMSPVWSHPSTSMVAAVATGSSR*PFMICGPRMQISPGRLRARDRPVSGSTTLSSAL 144
Query: 1268 LTTVPQAPDFTGNGSLANAMHIESTGPASVIP*PCPSTARGSLARS 1131
TTVP PD G GSLANA H++STGPASVIP PCP A G RS
Sbjct: 143 RTTVPHDPDLAGVGSLANAGHMDSTGPASVIPYPCPKMACGRRPRS 6
Score = 118 bits (252), Expect(2) = 6e-028
Identities = 62/127 (48%), Positives = 71/127 (55%)
Frame = -3 / -1
Query: 1543 *AWPRAPPERLGTPCT**AP*AGXXXXXXXXXXRTQCLRCAATPPSRWSSPLPPGC*GTL 1364
*A P A P G+P T**AP* G R++C RC ATP RWS P G G+L
Sbjct: 418 *AEPPARPAAPGSP*T**AP*RGRR*RPRRRRRRSRCRRCGATPRRRWSRRWPRGRPGSL 239
Query: 1363 SSTACP*CKSPRAGCGGGTARSPGR*SLARHSSPPCRRHRTSPVTAPWQTPCTSRAPGLP 1184
S +A C+S R GCG GT PGR A +PPCR RT P +APW+TP T AP P
Sbjct: 238 S*SAGRGCRSRRGGCGRGTGPCPGRPP*APRCAPPCRTTRTWPASAPWRTPGTWTAPAPP 59
Query: 1183 LSSHNPV 1163
SS PV
Sbjct: 58 PSSRTPV 38
Score = 111 bits (238), Expect = 1e-023
Identities = 54/98 (55%), Positives = 65/98 (66%)
Frame = -1 / -2
Query: 1437 NVSGVQPPLRVDGLRRCLRVVEVPFHQLLAPDANLPGLVAVEGQPGLRVDDL*LGIPHHR 1258
+V+GV+PPL VDG VV+V FH L A DA+L G VA EGQ +RVD L L + HHR
Sbjct: 312 DVAGVEPPLDVDGRGGGHGVVQVAFHDLRAADADLAGEVAGEGQARVRVDHLELRVAHHR 133
Query: 1257 AAGTGLHR*RLLGKRHAHREHRACLCHPITLSEHGARE 1144
AA GL R RL G+R AH +HR L HP+ LSE G R+
Sbjct: 132 AARPGLGRRRLPGERRAHGQHRPRLRHPVPLSEDGLRQ 19
Score = 97.7 bits (207), Expect(2) = 2e-023
Identities = 45/86 (52%), Positives = 54/86 (62%)
Frame = +3 / +3
Query: 1164 TGLWDDRGRPGALDVHGVCQGAVTGEVRCLRHGGEECRAKDHRPGDRAVPPPQPARGDLH 1343
TG+ DD G GA+ V GV QGA G+VR +RHGG + A+ RPG VP PQP R DLH
Sbjct: 39 TGVRDDGGGAGAVHVPGVRQGADAGQVRVVRHGGAQRGAQGGRPGHGPVPRPQPPRRDLH 218
Query: 1344 QGQAVDERVPQQPGGNGEDHRLGGVA 1421
A ER+P +P G+ DHR GVA
Sbjct: 219 PRPADHERLPGRPRGHRRDHRRRGVA 296
Score = 68.4 bits (143), Expect = 1e-010
Identities = 34/59 (57%), Positives = 36/59 (61%)
Frame = +2 / +2
Query: 1154 PCSDRVMG*QRQARCSRCAWRLPRSRYR*SPVPAARW*GMPS*RSSTRRPGCPSTATSP 1330
P SDR G*+R+ RC CA R P SR R SP AARW S R STR CPS ATSP
Sbjct: 29 PSSDRGTG*RRRGRCCPCARRSPGSRRRPSPGRAARWCATRSSRWSTRTRACPSPATSP 205
Score = 34.1 bits (68), Expect = 2.8
Identities = 19/55 (34%), Positives = 25/55 (45%)
Frame = +2 / +2
Query: 1088 SSRGPRPWARSCRTCCAPSSLAPCSDRVMG*QRQARCSRCAWRLPRSRYR*SPVP 1252
+SRG A S + S + + R R +RC R +WRL SR SP P
Sbjct: 281 TSRGGSTPATSATSTTTTRSSSSTASRSSSSSRASRCRRPSWRLCSSRIPPSPTP 445
Score = 32.7 bits (65), Expect(2) = 2e-023
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +3 / +3
Query: 1476 PAQGAHQVQGVPSRSGGA 1529
P QGAHQVQG+P +G A
Sbjct: 351 PRQGAHQVQGLPGAAGRA 404
Score = 27.2 bits (53), Expect(2) = 6e-028
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = -1 / -2
Query: 1629 RHDERHRDLAAGVIL 1585
R ERHRDL GVIL
Sbjct: 504 RTHERHRDLTGGVIL 460
>gb|BI959998.1|BI959998 HVSMEn0022N01f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0022N01f,
mRNA sequence
Length = 629
Score = 311 bits (673), Expect = 1e-083
Identities = 123/181 (67%), Positives = 153/181 (84%)
Frame = +1 / +1
Query: 814 VDGDNPNLHFREDDVVLCVLPMFHVYSLHSILLCGMRAGAALVIMKRFDTLRMFELVKRH 993
VDG+NPNL+FR++DV+LC+LP+FH+YSL+S+LL G+RAG+A+VIM++FD + ELV+ H
Sbjct: 1 VDGENPNLYFRKEDVLLCLLPLFHIYSLNSVLLAGLRAGSAMVIMRKFDIGALVELVRAH 180
Query: 994 GITIVPLVLPIAVEMVKSDAIDRHDLSSVRMVISGAAPMGKELQDLLRAKLPRAVLGQGY 1173
GIT+ P V PI VE+ KS + DL+S+RMV+SGAAPMGKELQD AK+P AVLGQGY
Sbjct: 181 GITVAPFVPPIVVEIAKSPQVTAGDLASIRMVMSGAAPMGKELQDAFMAKIPNAVLGQGY 360
Query: 1174 GMTEAGPVLSMCMAFAKEPLPVKSGACGTVVRNAELKIIDPETGLSLHRNQPGEICIRGK 1353
GMTEAGPVL+MC+AFAKEP VKSG+CGTVVRNA LKI+DP+TG L N PGEICIRG+
Sbjct: 361 GMTEAGPVLAMCLAFAKEPFKVKSGSCGTVVRNARLKIVDPDTGAFLRPNHPGEICIRGE 540
Query: 1354 Q 1356
Q
Sbjct: 541 Q 543
Score = 239 bits (516), Expect = 5e-062
Identities = 112/180 (62%), Positives = 118/180 (65%)
Frame = -2 / -1
Query: 1355 CLPLMQISPGWLRWRDSPVSGSMIFSSAFLTTVPQAPDFTGNGSLANAMHIESTGPASVI 1176
C P MQISPGW R +PVSGS I S A TTVP PD T NGSLANA H+ STGPASVI
Sbjct: 542 CSPRMQISPGWFGRRKAPVSGSTILSRALRTTVPHDPDLTLNGSLANARHMASTGPASVI 363
Query: 1175 P*PCPSTARGSLARSRSCSSLPMGAAPEMTMRTDERSWRSMASLLTISTAMGSTSGTIVM 996
P PCPSTA G LA SCSSLPMGAAP+MTMR D RS LL IST MG T G VM
Sbjct: 362 PYPCPSTALGILAMKASCSSLPMGAAPDMTMRMDARSPAVTWGLLAISTTMGGTKGATVM 183
Query: 995 PCLFTSSNMRRVSKRFMITSAAPARIPHSRMECSEYTWNMGSTQRTTSSSRKWRFGLSPS 816
PC TSS +S MIT A PAR P S E SE WN GS +TSS K+RFG SPS
Sbjct: 182 PCARTSSTSAPMSNLRMITIADPARSPASSTELSE*MWNSGSRHSSTSSFLKYRFGFSPS 3
Score = 192 bits (413), Expect = 7e-048
Identities = 90/165 (54%), Positives = 101/165 (61%)
Frame = -1 / -3
Query: 1365 FHQLLAPDANLPGLVAVEGQPGLRVDDL*LGIPHHRAAGTGLHR*RLLGKRHAHREHRAC 1186
F LL DA+L G+V E G+ VDDL G+ HHRAA GL RLLG+R AH +HR
Sbjct: 552 FMSLLPADADLAGVVRAEEGAGVGVDDLEPGVAHHRAARPGLDLERLLGERQAHGQHRPG 373
Query: 1185 LCHPITLSEHGARELGAQQVLQLLAHGRGPRDDHAHRREVVAVDGVALDHLHRDGQHERH 1006
L HP+ L EHG +LG + VLQLLAHGRG DHA REV D AL LH DG+HE
Sbjct: 372 LRHPVPLPEHGVGDLGHEGVLQLLAHGRGAGHDHADGREVAGGDLGALGDLHHDGRHEGR 193
Query: 1005 DRDAVPLHQLEHAESVEALHDHERRAGAHPAQQDGVQRVHVEHGQ 871
RDAV HQL VE HDH RR GA P QQ V+RV VE Q
Sbjct: 192 HRDAVRAHQLHQRADVELAHDHHRRPGAQPRQQHRVERVDVEQRQ 58
Score = 105 bits (224), Expect = 9e-022
Identities = 47/82 (57%), Positives = 49/82 (59%)
Frame = +2 / +2
Query: 1085 WSSRGPRPWARSCRTCCAPSSLAPCSDRVMG*QRQARCSRCAWRLPRSRYR*SPVPAARW 1264
WS PRPWARSCRT P S PCS R G*+R RC CAWR PRSR R SP AARW
Sbjct: 272 WSCPAPRPWARSCRTPSWPRSPTPCSGRGTG*RRPGRCWPCAWRSPRSRSRSSPGRAARW 451
Query: 1265 *GMPS*RSSTRRPGCPSTATSP 1330
P RSST P S T+P
Sbjct: 452 CATPGSRSSTPTPAPSSARTTP 517
Score = 80.3 bits (169), Expect = 3e-014
Identities = 34/59 (57%), Positives = 41/59 (69%)
Frame = +3 / +3
Query: 1167 GLWDDRGRPGALDVHGVCQGAVTGEVRCLRHGGEECRAKDHRPGDRAVPPPQPARGDLH 1343
G+ DD GR GA V GV QGAV G+VR +RHGG + A+D RP R +PPP+P R DLH
Sbjct: 354 GVRDDGGRAGAGHVPGVRQGAVQGQVRVVRHGGAQRPAQDRRPRHRRLPPPEPPRRDLH 530
Score = 71.2 bits (149), Expect = 2e-011
Identities = 32/59 (54%), Positives = 35/59 (59%)
Frame = -3 / -2
Query: 1342 CKSPRAGCGGGTARSPGR*SLARHSSPPCRRHRTSPVTAPWQTPCTSRAPGLPLSSHNP 1166
C+S R G GGG R GR S A +PPCR RT P TAPW+TP T AP P SS P
Sbjct: 529 CRSRRGGSGGGRRRCRGRRS*AGRCAPPCRTTRT*P*TAPWRTPGTWPAPARPPSSRTP 353
Score = 27.6 bits (54), Expect(2) = 2.3
Identities = 15/33 (45%), Positives = 17/33 (51%)
Frame = -2 / +2
Query: 1193 GPASVIP*PCPSTARGSLARSRSCSSLPMGAAP 1095
G S P P PS+AR + ARS S S M P
Sbjct: 464 GSRSSTPTPAPSSARTTPARSASAGSKLMKRYP 562
Score = 24.0 bits (46), Expect(2) = 2.3
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = -3 / +2
Query: 1423 AATPPSRWSSPLPPGC*GTLSSTACP*CKSPRAGCGGG 1310
A + PS WS P P + + + P +P +G G G
Sbjct: 251 ATSRPSAWSCPAPRPWARSCRTPSWPRSPTPCSGRGTG 364
>gb|BF623201.2|BF623201 HVSMEa0015K22f Hordeum vulgare seedling shoot EST library HVcDNA0001
(Cold stress) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEa0015K22f, mRNA sequence
Length = 817
Score = 244 bits (527), Expect(2) = 3e-065
Identities = 103/155 (66%), Positives = 118/155 (76%)
Frame = +1 / +3
Query: 1234 PVKSGACGTVVRNAELKIIDPETGLSLHRNQPGEICIRGKQLMKGYLNNPEATAKTIDSE 1413
P G +LKI+DP+TG SL RN PGEICIRGKQ+MKGYLN+PEAT T D +
Sbjct: 294 PSSRGPAARWCGTRKLKIVDPDTGASLARNLPGEICIRGKQIMKGYLNDPEATKNTTDKD 473
Query: 1414 GWLHTGDIGYVDDGDEIFIVDRLKELIKYKGFQVAPAELEAMLIAHPSIVDAAVVQMKDD 1593
GWLHTGDIGYVDD DEIFIVDRLKE+IKYKGFQV PAELE +LI H I DAAVV M+D+
Sbjct: 474 GWLHTGDIGYVDDDDEIFIVDRLKEIIKYKGFQVPPAELEPLLITHAEIKDAAVVSMQDE 653
Query: 1594 SCGEIPVAFVVASGGSGITEDEIKQYVAKQVVFYK 1698
GE+PVAF+V GS I+E EIKQ+ AK+VV K
Sbjct: 654 LTGEVPVAFIVRIEGSEISESEIKQFGAKEVVSTK 758
Score = 182 bits (392), Expect(3) = 3e-058
Identities = 74/112 (66%), Positives = 90/112 (80%)
Frame = +1 / +2
Query: 943 IMKRFDTLRMFELVKRHGITIVPLVLPIAVEMVKSDAIDRHDLSSVRMVISGAAPMGKEL 1122
IM++ D + LV+ HG+T+ P V PI V++ KSD + DL+S+RMV+SGAAPMGK+L
Sbjct: 2 IMRKVDHGALVRLVRAHGVTVAPFVPPIVVQIAKSDRVTAADLASIRMVMSGAAPMGKDL 181
Query: 1123 QDLLRAKLPRAVLGQGYGMTEAGPVLSMCMAFAKEPLPVKSGACGTVVRNAE 1278
QD AK+P AVLGQGYGMTEAGPVLSMC+AFAKEP VKSG+CGTVVRNAE
Sbjct: 182 QDAFMAKIPNAVLGQGYGMTEAGPVLSMCLAFAKEPFAVKSGSCGTVVRNAE 337
Score = 174 bits (374), Expect(2) = 2e-079
Identities = 86/146 (58%), Positives = 94/146 (64%)
Frame = -2 / -1
Query: 1715 KILCSLL*NTTCFATYCLISSSVIPEPPDATTNATGISPQESSFIWTTAASTMLGWXXXX 1536
K C TT FA CLIS S+I EP T NATG SP SS I TTAAS +
Sbjct: 775 KKTCGSFVETTSFAPNCLISLSLISEPSIRTMNATGTSPVSSSCIDTTAASLISACVMRR 596
Query: 1535 XXXXXXATWNPLYLMSSLSRSTMKISSPSSTYPMSPVCSHPSESMVFAVASGLLRYPFIN 1356
TWNPLYL+ SLS STMKISS SST PMSPVC+ PS S+VF VASG R PF+
Sbjct: 595 GSSSAGGTWNPLYLIISLSLSTMKISSSSST*PMSPVCNQPSLSVVFFVASGSFR*PFMI 416
Query: 1355 CLPLMQISPGWLRWRDSPVSGSMIFS 1278
CLP MQISPG LR R++PVSGS I S
Sbjct: 415 CLPRMQISPGRLRAREAPVSGSTILS 338
Score = 144 bits (308), Expect(2) = 2e-079
Identities = 65/100 (65%), Positives = 70/100 (70%)
Frame = -2 / -2
Query: 1280 SSAFLTTVPQAPDFTGNGSLANAMHIESTGPASVIP*PCPSTARGSLARSRSCSSLPMGA 1101
+SAF TTVPQ PD T NGSLANA H++STGPASVIP PCPSTA G LA S SLPMGA
Sbjct: 339 ASAFRTTVPQDPDLTANGSLANARHMDSTGPASVIPYPCPSTALGILAMKASWRSLPMGA 160
Query: 1100 APEMTMRTDERSWRSMASLLTISTAMGSTSGTIVMPCLFT 981
AP+MTMR + RS SLL I T MG T G V PC T
Sbjct: 159 APDMTMRMEARSAAVTRSLLAIWTTMGGTKGATVTPCART 40
Score = 119 bits (255), Expect(3) = 2e-043
Identities = 55/110 (50%), Positives = 65/110 (59%)
Frame = -1 / -1
Query: 1272 IPHHRAAGTGLHR*RLLGKRHAHREHRACLCHPITLSEHGARELGAQQVLQLLAHGRGPR 1093
+PHHRAAG L RLLG+R AH +HR L HP+ LSEHG +LG + VL++LAHGRG
Sbjct: 331 VPHHRAAGPRLDGERLLGERQAHGQHRPGLRHPVPLSEHGVGDLGHEGVLEVLAHGRGAG 152
Query: 1092 DDHAHRREVVAVDGVALDHLHRDGQHERHDRDAVPLHQLEHAESVEALHD 943
DHA EV VAL L DG+HE D V HQ V+ HD
Sbjct: 151 HDHADGGEVGGGHPVALGDLDDDGRHEGRHGDPVRAHQAHQRAVVDLAHD 2
Score = 86.8 bits (183), Expect = 4e-016
Identities = 37/62 (59%), Positives = 39/62 (62%)
Frame = +2 / +3
Query: 1085 WSSRGPRPWARSCRTCCAPSSLAPCSDRVMG*QRQARCSRCAWRLPRSRYR*SPVPAARW 1264
WS PRPWAR+ RT P S PCSDR G*+R RC CAWR PRSR S PAARW
Sbjct: 144 WSCPAPRPWARTSRTPSWPRSPTPCSDRGTG*RRPGRCCPCAWRSPRSRSPSSRGPAARW 323
Query: 1265 *G 1270
G
Sbjct: 324 CG 329
Score = 63.8 bits (133), Expect(3) = 2e-043
Identities = 26/50 (52%), Positives = 31/50 (62%)
Frame = -3 / -2
Query: 1438 QCLRCAATPPSRWSSPLPPGC*GTLSSTACP*CKSPRAGCGGGTARSPGR 1289
+CL+CA P +W S PP G LS +AC C+SPRAGCG G R GR
Sbjct: 498 RCLQCATNHPCQWCSLWPPDHLGNLS*SACRGCRSPRAGCGRGRRRCRGR 349
Score = 62.5 bits (130), Expect(2) = 1e-017
Identities = 29/52 (55%), Positives = 36/52 (69%)
Frame = -1 / -3
Query: 1437 NVSGVQPPLRVDGLRRCLRVVEVPFHQLLAPDANLPGLVAVEGQPGLRVDDL 1282
+VS VQP + V G+ LR++ V FH LLA DA+LPG VA EG G+ VDDL
Sbjct: 497 DVSSVQPTILVSGVLCGLRII*VTFHDLLAADADLPGQVAGEGGAGVGVDDL 342
Score = 59.7 bits (124), Expect(3) = 3e-058
Identities = 26/49 (53%), Positives = 32/49 (65%)
Frame = +3 / +2
Query: 1278 AKDHRPGDRAVPPPQPARGDLHQGQAVDERVPQQPGGNGEDHRLGGVAA 1424
A+D RP R +P PQPARGDLH QA ER+P+ GG+ E H G + A
Sbjct: 338 AQDRRPRHRRLPRPQPARGDLHPRQADHERLPK*SGGHKEHH*QGWLVA 484
Score = 50.1 bits (103), Expect(2) = 1e-006
Identities = 26/57 (45%), Positives = 30/57 (52%)
Frame = +3 / +1
Query: 1164 TGLWDDRGRPGALDVHGVCQGAVTGEVRCLRHGGEECRAKDHRPGDRAVPPPQPARG 1334
TG+ DD GR GA+ V GV QGAV +V LRHGG E + A P P G
Sbjct: 223 TGVRDDGGRAGAVHVPGVRQGAVRRQVGVLRHGGAERGSSRSSTPTPAPPSPATCPG 393
Score = 48.7 bits (100), Expect(2) = 1e-017
Identities = 21/36 (58%), Positives = 23/36 (63%)
Frame = -3 / -3
Query: 1270 SSPPCRRHRTSPVTAPWQTPCTSRAPGLPLSSHNPV 1163
S+PPCRR T TAPW+TP T AP P SS PV
Sbjct: 329 SAPPCRRTPT*RRTAPWRTPGTWTAPARPPSSRTPV 222
Score = 32.2 bits (64), Expect(3) = 2e-043
Identities = 20/60 (33%), Positives = 26/60 (43%)
Frame = -1 / -3
Query: 1698 LVEHHLFRHVLLDLVLGDPGAAGRHDERHRDLAAGVILHLXXXXXXXXXXXDEHGLELRR 1519
L ++LF LLDL L D A H+E + + ILH +E G E RR
Sbjct: 758 LCRNNLFCTKLLDLALADLRAFNPHNECNWYFTSKFILHRYNSSIFDFSVCNEKGFEFRR 579
Score = 26.3 bits (51), Expect(2) = 3e-065
Identities = 6/15 (40%), Positives = 14/15 (93%)
Frame = +1 / +3
Query: 1708 KIFFVEAIPKAPSGK 1752
++FF +++PK+P+G+
Sbjct: 765 QVFFADSVPKSPAGR 809
Score = 23.5 bits (45), Expect(3) = 3e-058
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +3 / +2
Query: 1479 AQGAHQVQGVPSRSGG 1526
AQ +Q+QG+PS S G
Sbjct: 539 AQRDNQIQGIPSTSCG 586
Score = 23.5 bits (45), Expect(2) = 1e-006
Identities = 9/23 (39%), Positives = 11/23 (47%)
Frame = +2 / +3
Query: 1085 WSSRGPRPWARSCRTCCAPSSLA 1153
W +R PW SCR + S A
Sbjct: 39 WCARTGSPWRPSCRPSSSRSPRA 107
>gb|BE213865.1|BE213865 HV_CEb0001H21f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0001H21f, mRNA sequence
Length = 922
Score = 282 bits (611), Expect = 4e-075
Identities = 113/160 (70%), Positives = 138/160 (86%)
Frame = +1 / +1
Query: 1312 LHRNQPGEICIRGKQLMKGYLNNPEATAKTIDSEGWLHTGDIGYVDDGDEIFIVDRLKEL 1491
L RNQPGE +RG+ +MKGYLN+PE+T TID +GWLHTGDIG VDD DEIFIVDRLKE+
Sbjct: 1 LGRNQPGERGVRGEHIMKGYLNDPESTKNTIDKDGWLHTGDIGIVDDDDEIFIVDRLKEI 180
Query: 1492 IKYKGFQVAPAELEAMLIAHPSIVDAAVVQMKDDSCGEIPVAFVVASGGSGITEDEIKQY 1671
+KYKGFQVAPAELEA+LI HP I DAAVV +KDD GE+P+AFV+ GS ITED+IK++
Sbjct: 181 MKYKGFQVAPAELEALLITHPEIKDAAVVSLKDDLAGEVPIAFVMRIEGSEITEDDIKKF 360
Query: 1672 VAKQVVFYKRLHKIFFVEAIPKAPSGKILRKDLRAKLASG 1791
VAK+V FYKR+HK+FF +++PK PSG+ILRKDLRA+LA+G
Sbjct: 361 VAKEVGFYKRIHKVFFTDSMPKNPSGEILRKDLRARLATG 480
Score = 194 bits (418), Expect = 1e-048
Identities = 94/158 (59%), Positives = 102/158 (64%)
Frame = -2 / -3
Query: 1790 PDASFALRSFLKILPDGALGMASTKKILCSLL*NTTCFATYCLISSSVIPEPPDATTNAT 1611
P AS AL+SFL+I P+G LG+ S KK L LL* T FAT L+SSSVI EP T A
Sbjct: 479 PVASLALKSFLRISPEGFLGIESVKKTLWILL*KPTSFATNFLMSSSVISEPSIRITKAI 300
Query: 1610 GISPQESSFIWTTAASTMLGWXXXXXXXXXXATWNPLYLMSSLSRSTMKISSPSSTYPMS 1431
G SP SSF TTAAS + GW ATW PLY M SLS STMKISS SST PMS
Sbjct: 299 GTSPARSSFSDTTAASLISGWVMRRASSSAGATWKPLYFMISLSLSTMKISSSSSTMPMS 120
Query: 1430 PVCSHPSESMVFAVASGLLRYPFINCLPLMQISPGWLR 1317
PVCS PS SMVF V SG LR PF+ C P +SPGW R
Sbjct: 119 PVCSQPSLSMVFLVDSGSLR*PFMICSPRTPLSPGWFR 6
Score = 65.7 bits (137), Expect(3) = 5e-021
Identities = 37/85 (43%), Positives = 47/85 (55%)
Frame = -1 / -2
Query: 1773 SQILP*NLAGWRLGDGLHEEDLVQPLVEHHLFRHVLLDLVLGDPGAAGRHDERHRDLAAG 1594
SQ+LP +LA LG + EEDLV PLVE +L R D++LGD A H+E RD A+
Sbjct: 462 SQVLPQDLA*RVLGH*VGEEDLVDPLVETNLLRDEFFDVILGDFRAFDPHNEGDRDFASK 283
Query: 1593 VILHLXXXXXXXXXXXDEHGLELRR 1519
++L DE GLEL R
Sbjct: 282 IVLQRYDGGVLDLRVGDEEGLELCR 208
Score = 47.3 bits (97), Expect(3) = 5e-021
Identities = 22/42 (52%), Positives = 27/42 (64%)
Frame = -1 / -2
Query: 1437 NVSGVQPPLRVDGLRRCLRVVEVPFHQLLAPDANLPGLVAVE 1312
+VSGVQP + VDG+ VV+V FH +L A LPGLV E
Sbjct: 126 DVSGVQPAILVDGVLGGFWVVKVTFHDMLPAHAPLPGLVPAE 1
Score = 40.5 bits (82), Expect(2) = 4e-004
Identities = 22/41 (53%), Positives = 24/41 (58%)
Frame = -3 / -1
Query: 1438 QCLRCAATPPSRWSSPLPPGC*GTLSSTACP*CKSPRAGCG 1316
+CLRCAA+ P RW S G *G LS A SPRAG G
Sbjct: 127 RCLRCAASHPCRWCSWWILGR*GNLS*YAPRARPSPRAGSG 5
Score = 34.5 bits (69), Expect(2) = 0.003
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = +3 / +3
Query: 1317 PQPARGDLHQGQAVDERVPQQPGGNGEDHRLGGVAA 1424
P+PARG+ A ER+P +P + E HR G +AA
Sbjct: 6 PEPARGEGRARGAYHERLP*RPRIHQEHHRQGWLAA 113
Score = 28.6 bits (56), Expect(2) = 4e-004
Identities = 14/35 (40%), Positives = 15/35 (42%)
Frame = -3 / -1
Query: 1798 WRIQTPALLSDPSLKSCRMAPWGWPPRRRSCAASC 1694
W Q A LS PS S W RR C +SC
Sbjct: 487 WVCQWRAWLSSPSSGSRLKGSWALSR*RRPCGSSC 383
Score = 27.2 bits (53), Expect(2) = 0.003
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +3 / +3
Query: 1479 AQGAHQVQGVPSRSGGA 1529
AQG H+VQG+P +G A
Sbjct: 168 AQGDHEVQGLPGGAGRA 218
Score = 26.7 bits (52), Expect(3) = 5e-021
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = -3 / -1
Query: 1534 PRAPPERLGTPCT**AP*A 1478
PRA P G+PCT *+P*A
Sbjct: 223 PRALPAPPGSPCTS*SP*A 167
>gb|BI958356.1|BI958356 HVSMEn0014I24f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0014I24f,
mRNA sequence
Length = 666
Score = 273 bits (591), Expect = 2e-072
Identities = 108/161 (67%), Positives = 137/161 (85%)
Frame = +1 / +2
Query: 730 LPYSSGTTGLPKGVMLSHRGLVTSVAQLVDGDNPNLHFREDDVVLCVLPMFHVYSLHSIL 909
LPYSSGT GLPKGVML+HR L+TSVAQ VDG+NPNL+FR++DV+LC+LP+FH+YSL+S+L
Sbjct: 158 LPYSSGTAGLPKGVMLTHRSLITSVAQQVDGENPNLYFRKEDVLLCLLPLFHIYSLNSVL 337
Query: 910 LCGMRAGAALVIMKRFDTLRMFELVKRHGITIVPLVLPIAVEMVKSDAIDRHDLSSVRMV 1089
L G+RAG+A+VIM++FD + ELV+ HGIT+ P V PI VE+ KS + DL+ +RMV
Sbjct: 338 LAGLRAGSAMVIMRKFDIGALVELVRAHGITVAPFVPPIVVEIAKSPQVTAGDLACIRMV 517
Query: 1090 ISGAAPMGKELQDLLRAKLPRAVLGQGYGMTEAGPVLSMCM 1212
+SGAAPMGKELQD AK+P AVLGQG+GMTEAGPVL+MC+
Sbjct: 518 MSGAAPMGKELQDAFMAKIPNAVLGQGFGMTEAGPVLAMCL 640
Score = 214 bits (461), Expect = 2e-054
Identities = 99/159 (62%), Positives = 106/159 (66%)
Frame = -2 / -1
Query: 1208 HIESTGPASVIP*PCPSTARGSLARSRSCSSLPMGAAPEMTMRTDERSWRSMASLLTIST 1029
H+ STGPASVIP PCPSTA G LA SCSSLPMGAAP+MTMR RS LL IST
Sbjct: 636 HMASTGPASVIPNPCPSTALGILAMKASCSSLPMGAAPDMTMRMHARSPAVTWGLLAIST 457
Query: 1028 AMGSTSGTIVMPCLFTSSNMRRVSKRFMITSAAPARIPHSRMECSEYTWNMGSTQRTTSS 849
MG T G VMPC TSS +S MIT A PAR P S E SE WN GS +TSS
Sbjct: 456 TMGGTKGATVMPCARTSSTSAPMSNLRMITIADPARSPASSTELSE*MWNSGSRHSSTSS 277
Query: 848 SRKWRFGLSPSTSCATLVTSPRCDSITPLGSPVVPDEYG 732
K+RFG SPST CATLV RC S+TPLGSP VP+EYG
Sbjct: 276 FLKYRFGFSPSTCCATLVMRLRCVSMTPLGSPAVPEEYG 160
Score = 136 bits (292), Expect(2) = 1e-032
Identities = 62/113 (54%), Positives = 67/113 (59%)
Frame = -1 / -3
Query: 1209 AHREHRACLCHPITLSEHGARELGAQQVLQLLAHGRGPRDDHAHRREVVAVDGVALDHLH 1030
AH +HR HP L EHG +LG + VLQLLAHGRG DHA REV D AL LH
Sbjct: 637 AHGQHRPGFSHPEPLPEHGVGDLGHEGVLQLLAHGRGAGHDHADAREVAGGDLGALGDLH 458
Query: 1029 RDGQHERHDRDAVPLHQLEHAESVEALHDHERRAGAHPAQQDGVQRVHVEHGQ 871
DG+HE RDAV HQL VE HDH RR GA P QQ V+RV VE Q
Sbjct: 457 HDGRHEGRHRDAVRAHQLHQRADVELAHDHHRRPGAQPRQQHRVERVDVEQRQ 299
Score = 63.8 bits (133), Expect(2) = 1e-009
Identities = 25/43 (58%), Positives = 26/43 (60%)
Frame = +2 / +3
Query: 1085 WSSRGPRPWARSCRTCCAPSSLAPCSDRVMG*QRQARCSRCAW 1213
WS PRPWARSCRT P S PCS R G* + RC CAW
Sbjct: 513 WSCPAPRPWARSCRTPSWPRSPTPCSGRGSG*LKPGRCWPCAW 641
Score = 24.4 bits (47), Expect(2) = 1e-032
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -1 / -3
Query: 801 AGYQPTVRQHHPLGQP 754
AG + VR+H LGQP
Sbjct: 229 AGDEAAVREHDALGQP 182
Score = 23.5 bits (45), Expect(2) = 1e-009
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +3 / +1
Query: 735 VLVRHDGAAQGGDAVAP 785
+L+RH AAQG A AP
Sbjct: 163 ILLRHRRAAQGRHAHAP 213
>gb|BF253382.2|BF253382 HVSMEf0001A07f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEf0001A07f, mRNA sequence
Length = 864
Score = 264 bits (571), Expect(2) = 4e-072
Identities = 109/159 (68%), Positives = 129/159 (81%)
Frame = +1 / +2
Query: 940 VIMKRFDTLRMFELVKRHGITIVPLVLPIAVEMVKSDAIDRHDLSSVRMVISGAAPMGKE 1119
VIM++FD + LV+ HG+T+ P V PI VE+ KSD + DL+S+RMV+SGAAPMGK+
Sbjct: 2 VIMRKFDHGALVRLVRAHGVTVAPFVPPIVVEIAKSDRVTAADLASIRMVMSGAAPMGKD 181
Query: 1120 LQDLLRAKLPRAVLGQGYGMTEAGPVLSMCMAFAKEPLPVKSGACGTVVRNAELKIIDPE 1299
LQD AK+P AVLGQGYGMTEAGPVLSMC+AFAKEP VKSG+CGTVVRNAELKI +P+
Sbjct: 182 LQDAFMAKIPNAVLGQGYGMTEAGPVLSMCLAFAKEPFAVKSGSCGTVVRNAELKIDNPD 361
Query: 1300 TGLSLHRNQPGEICIRGKQLMKGYLNNPEATAKTIDSEG 1416
TG L RN PGEICIRGKQ+MKGYL +PEAT TID +G
Sbjct: 362 TGAYLARNLPGEICIRGKQIMKGYLCDPEATKNTIDKDG 478
Score = 208 bits (448), Expect(2) = 2e-053
Identities = 101/159 (63%), Positives = 107/159 (67%)
Frame = -2 / -1
Query: 1415 PSESMVFAVASGLLRYPFINCLPLMQISPGWLRWRDSPVSGSMIFSSAFLTTVPQAPDFT 1236
PS SMVF VASG R PF+ CLP MQISPG LR R +PVSG I SSAF TTVPQ PD T
Sbjct: 477 PSLSMVFFVASGSHR*PFMICLPRMQISPGRLRAR*APVSGLSILSSAFRTTVPQDPDLT 298
Query: 1235 GNGSLANAMHIESTGPASVIP*PCPSTARGSLARSRSCSSLPMGAAPEMTMRTDERSWRS 1056
NGSLANA H++STGPASVIP PCPSTA G LA S SLPMGAAP+MTMR + RS
Sbjct: 297 ANGSLANARHMDSTGPASVIPYPCPSTALGILAMKASWRSLPMGAAPDMTMRMEARSAAV 118
Query: 1055 MASLLTISTAMGSTSGTIVMPCLFTSSNMRRVSKRFMIT 939
SLL IST MG T G V PC T S MIT
Sbjct: 117 TRSLLAISTTMGGTKGATVTPCARTRRTSAPWSNLRMIT 1
Score = 163 bits (350), Expect = 4e-039
Identities = 80/156 (51%), Positives = 94/156 (60%)
Frame = -1 / -3
Query: 1407 VDGLRRCLRVVEVPFHQLLAPDANLPGLVAVEGQPGLRVDDL*LGIPHHRAAGTGLHR*R 1228
V+G+ LR+ V FH LLA DA+LPG VA E G+ V DL L +PHHRAAG L R
Sbjct: 469 VNGVLCGLRIT*VTFHDLLAADADLPGQVAGEVGAGVGVVDLELRVPHHRAAGPRLDGER 290
Query: 1227 LLGKRHAHREHRACLCHPITLSEHGARELGAQQVLQLLAHGRGPRDDHAHRREVVAVDGV 1048
LLG+R AH +HR L HP+ LSEHG +LG + VL++LAHGRG DHA EV V
Sbjct: 289 LLGERQAHGQHRPGLRHPVPLSEHGVGDLGHEGVLEVLAHGRGAGHDHADGGEVGGGHPV 110
Query: 1047 ALDHLHRDGQHERHDRDAVPLHQLEHAESVEALHDH 940
AL L DG+HE D V HQ VE HDH
Sbjct: 109 ALGDLDDDGRHEGRHGDPVRAHQAHQRAVVELAHDH 2
Score = 100 bits (213), Expect = 3e-020
Identities = 46/82 (56%), Positives = 49/82 (59%)
Frame = +2 / +3
Query: 1085 WSSRGPRPWARSCRTCCAPSSLAPCSDRVMG*QRQARCSRCAWRLPRSRYR*SPVPAARW 1264
WS PRPWAR+ RT P S PCSDR G*+R RC CAWR PRSR S PAARW
Sbjct: 147 WSCPAPRPWARTSRTPSWPRSPTPCSDRGTG*RRPGRCCPCAWRSPRSRSPSSRGPAARW 326
Query: 1265 *GMPS*RSSTRRPGCPSTATSP 1330
G S RS+T P S AT P
Sbjct: 327 CGTRSSRSTTPTPAPTSPATCP 392
Score = 99.6 bits (211), Expect(2) = 3e-021
Identities = 45/80 (56%), Positives = 53/80 (66%)
Frame = +3 / +1
Query: 1164 TGLWDDRGRPGALDVHGVCQGAVTGEVRCLRHGGEECRAKDHRPGDRAVPPPQPARGDLH 1343
TG+ DD GR GA+ V GV QGAV +V LRHGG E A+D +P R +P PQPARGDLH
Sbjct: 226 TGVRDDGGRAGAVHVPGVRQGAVRRQVGVLRHGGAERGAQDRQPRHRRLPRPQPARGDLH 405
Query: 1344 QGQAVDERVPQQPGGNGEDH 1403
QA ER+P GG+ E H
Sbjct: 406 PRQADHERLPM*SGGHKEHH 465
Score = 93.2 bits (197), Expect = 5e-018
Identities = 44/83 (53%), Positives = 49/83 (59%)
Frame = -3 / -2
Query: 1411 PSRWSSPLPPGC*GTLSSTACP*CKSPRAGCGGGTARSPGR*SLARHSSPPCRRHRTSPV 1232
P +W S PP G LS +AC C+SPRAGCG G R G S A S+PPCRR T
Sbjct: 473 PCQWCSLWPPDHIGNLS*SACRGCRSPRAGCGRGRRRCRGCRS*APRSAPPCRRTPT*RR 294
Query: 1231 TAPWQTPCTSRAPGLPLSSHNPV 1163
TAPW+TP T AP P SS PV
Sbjct: 293 TAPWRTPGTWTAPARPPSSRTPV 225
Score = 29.0 bits (57), Expect(2) = 4e-072
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +1 / +3
Query: 1417 WLHTGDIGY 1443
WLHTGDIGY
Sbjct: 480 WLHTGDIGY 506
Score = 23.5 bits (45), Expect(2) = 3e-021
Identities = 9/23 (39%), Positives = 11/23 (47%)
Frame = +2 / +3
Query: 1085 WSSRGPRPWARSCRTCCAPSSLA 1153
W +R PW SCR + S A
Sbjct: 42 WCARTGSPWRPSCRPSSSRSPRA 110
Score = 23.1 bits (44), Expect(2) = 2e-053
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = -2 / -3
Query: 1442 YPMSPVCS 1419
YPMSPVC+
Sbjct: 505 YPMSPVCN 482
>gb|CA012845.1|CA012845 HT06J23r HT Hordeum vulgare subsp. vulgare cDNA clone HT06J23
5-PRIME, mRNA sequence
Length = 684
Score = 214 bits (461), Expect(2) = 2e-071
Identities = 85/130 (65%), Positives = 107/130 (82%)
Frame = +1 / +3
Query: 829 PNLHFREDDVVLCVLPMFHVYSLHSILLCGMRAGAALVIMKRFDTLRMFELVKRHGITIV 1008
P L+F E+DVVLCVLP+FH+YSL+S+LL G+RAG A+VIM++FD + LV+ HG+T+
Sbjct: 294 PELYFGEEDVVLCVLPLFHIYSLNSVLLAGLRAGCAIVIMRKFDHGVLVRLVRAHGVTVA 473
Query: 1009 PLVLPIAVEMVKSDAIDRHDLSSVRMVISGAAPMGKELQDLLRAKLPRAVLGQGYGMTEA 1188
P V PI VE+ KSD + DL+S+RMV+SGAAPMGK+LQD AK+P AVLGQGYGMTEA
Sbjct: 474 PFVPPIVVEIAKSDRVTAADLASIRMVMSGAAPMGKDLQDAFMAKIPNAVLGQGYGMTEA 653
Query: 1189 GPVLSMCMAF 1218
GPVLSMC+AF
Sbjct: 654 GPVLSMCLAF 683
Score = 153 bits (329), Expect(2) = 4e-046
Identities = 75/130 (57%), Positives = 80/130 (61%)
Frame = -2 / -3
Query: 1217 NAMHIESTGPASVIP*PCPSTARGSLARSRSCSSLPMGAAPEMTMRTDERSWRSMASLLT 1038
NA H++STGPASVIP PCPSTA G LA S SLPMGAAP+MTMR + RS SLL
Sbjct: 682 NARHMDSTGPASVIPYPCPSTALGILAMKASWRSLPMGAAPDMTMRMEARSAAVTRSLLA 503
Query: 1037 ISTAMGSTSGTIVMPCLFTSSNMRRVSKRFMITSAAPARIPHSRMECSEYTWNMGSTQRT 858
IST MG T G V PC T S MIT A PAR P S E SE WN GST T
Sbjct: 502 ISTTMGGTKGATVTPCARTRRTSTPWSNLRMITIAHPARSPASSTELSE*MWNSGSTHST 323
Query: 857 TSSSRKWRFG 828
TSSS K+ G
Sbjct: 322 TSSSPKYSSG 293
Score = 123 bits (264), Expect = 3e-027
Identities = 57/117 (48%), Positives = 67/117 (57%)
Frame = -1 / -2
Query: 1218 KRHAHREHRACLCHPITLSEHGARELGAQQVLQLLAHGRGPRDDHAHRREVVAVDGVALD 1039
+R AH +HR L HP+ LSEHG +LG + VL++LAHGRG DHA EV VAL
Sbjct: 683 ERQAHGQHRPGLRHPVPLSEHGVGDLGHEGVLEVLAHGRGAGHDHADGGEVGGGHPVALG 504
Query: 1038 HLHRDGQHERHDRDAVPLHQLEHAESVEALHDHERRAGAHPAQQDGVQRVHVEHGQH 868
L DG+HE D V HQ VE HDH+R G P QQ V+RV VE QH
Sbjct: 503 DLDDDGRHEGRHGDPVRAHQAHQHAVVELAHDHDRAPGPQPRQQHRVERVDVEQRQH 333
Score = 77.1 bits (162), Expect(2) = 2e-071
Identities = 31/35 (88%), Positives = 33/35 (94%)
Frame = +1 / +1
Query: 730 LPYSSGTTGLPKGVMLSHRGLVTSVAQLVDGDNPN 834
LPYSSGTTGLPKGVML+HR LVTSVAQ VDG+NPN
Sbjct: 196 LPYSSGTTGLPKGVMLTHRSLVTSVAQQVDGENPN 300
Score = 67.0 bits (140), Expect = 3e-010
Identities = 26/44 (59%), Positives = 28/44 (63%)
Frame = +2 / +1
Query: 1085 WSSRGPRPWARSCRTCCAPSSLAPCSDRVMG*QRQARCSRCAWR 1216
WS PRPWAR+ RT P S PCSDR G*+R RC CAWR
Sbjct: 550 WSCPAPRPWARTSRTPSWPRSPTPCSDRGTG*RRPGRCCPCAWR 681
Score = 52.8 bits (109), Expect(2) = 4e-046
Identities = 24/35 (68%), Positives = 26/35 (74%)
Frame = -2 / -2
Query: 836 RFGLSPSTSCATLVTSPRCDSITPLGSPVVPDEYG 732
+FG SPST ATLVT R S+TPLG PVVPDE G
Sbjct: 302 QFGFSPSTCWATLVTRLRWVSMTPLGRPVVPDE*G 198
>gb|BE193837.3|BE193837 HVSMEh0082K14f Hordeum vulgare 5-45 DAP spike EST library HVcDNA0009
(5 to 45 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEh0082K14f, mRNA sequence
Length = 803
Score = 253 bits (547), Expect = 2e-066
Identities = 105/150 (70%), Positives = 123/150 (82%)
Frame = +1 / +2
Query: 1066 DLSSVRMVISGAAPMGKELQDLLRAKLPRAVLGQGYGMTEAGPVLSMCMAFAKEPLPVKS 1245
DL+S+RMV+SGAAPMGKELQD AK+P AVLGQGYGMTEAGPVL+MC+AFAKEP VKS
Sbjct: 8 DLASIRMVMSGAAPMGKELQDAFMAKIPNAVLGQGYGMTEAGPVLAMCLAFAKEPFKVKS 187
Query: 1246 GACGTVVRNAELKIIDPETGLSLHRNQPGEICIRGKQLMKGYLNNPEATAKTIDSEGWLH 1425
G+CGTVVRNA LKI+DP+TG L RNQPGEICIRG+Q+MKGYL +P +T TID +GWL
Sbjct: 188 GSCGTVVRNAGLKIVDPDTGAFLGRNQPGEICIRGEQIMKGYLIDP*STKNTIDKDGWLD 367
Query: 1426 TGDIGYVDDGDEIFIVDRLKELIKYKGFQV 1515
TG+IG V+ DEIFIV L+ +GF V
Sbjct: 368 TGNIGIVNYDDEIFIVTGLRRSSSTRGFHV 457
Score = 216 bits (466), Expect = 4e-055
Identities = 100/150 (66%), Positives = 105/150 (70%)
Frame = -2 / -3
Query: 1514 TWNPLYLMSSLSRSTMKISSPSSTYPMSPVCSHPSESMVFAVASGLLRYPFINCLPLMQI 1335
TW PL L LS TMKISS T PM PV S PS SMVF V G +R PF+ C P MQI
Sbjct: 456 TWKPLVLDDLLSPVTMKISSS*LTMPMFPVSSQPSLSMVFLVDYGSIR*PFMICSPRMQI 277
Query: 1334 SPGWLRWRDSPVSGSMIFSSAFLTTVPQAPDFTGNGSLANAMHIESTGPASVIP*PCPST 1155
SPGW R R +PVSGS I S A TTVP PD T NGSLANA H+ STGPASVIP PCPST
Sbjct: 276 SPGWFRPRKAPVSGSTILSPALRTTVPHDPDLTLNGSLANARHMASTGPASVIPYPCPST 97
Query: 1154 ARGSLARSRSCSSLPMGAAPEMTMRTDERS 1065
A G LA SCSSLPMGAAP+MTMR D RS
Sbjct: 96 ALGILAMKASCSSLPMGAAPDMTMRMDARS 7
Score = 143 bits (306), Expect = 4e-033
Identities = 69/124 (55%), Positives = 81/124 (65%)
Frame = -1 / -2
Query: 1437 NVSGVQPPLRVDGLRRCLRVVEVPFHQLLAPDANLPGLVAVEGQPGLRVDDL*LGIPHHR 1258
+VSGVQP + VDG+ L V +V FH LL DA+L GLV E G+ V DL G+ HHR
Sbjct: 379 DVSGVQPAILVDGVLGGLWVDKVTFHDLLPTDADLAGLVPPEEGAGVGVYDLEPGVAHHR 200
Query: 1257 AAGTGLHR*RLLGKRHAHREHRACLCHPITLSEHGARELGAQQVLQLLAHGRGPRDDHAH 1078
AA GL RLLG+R AH +HR L HP+ L EHG +LG + VLQLLAHGRG DHA
Sbjct: 199 AARPGLDLERLLGERQAHGQHRPGLRHPVPLPEHGVGDLGHEGVLQLLAHGRGAGHDHAD 20
Query: 1077 RREV 1066
REV
Sbjct: 19 GREV 8
Score = 101 bits (215), Expect = 1e-020
Identities = 46/82 (56%), Positives = 48/82 (58%)
Frame = +2 / +3
Query: 1085 WSSRGPRPWARSCRTCCAPSSLAPCSDRVMG*QRQARCSRCAWRLPRSRYR*SPVPAARW 1264
WS PRPWARSCRT P S PCS R G*+R RC CAWR PRSR R SP AARW
Sbjct: 27 WSCPAPRPWARSCRTPSWPRSPTPCSGRGTG*RRPGRCWPCAWRSPRSRSRSSPGRAARW 206
Query: 1265 *GMPS*RSSTRRPGCPSTATSP 1330
P RS T P S T+P
Sbjct: 207 CATPGSRS*TPTPAPSSGGTNP 272
Score = 92.3 bits (195), Expect = 9e-018
Identities = 43/85 (50%), Positives = 54/85 (63%)
Frame = +3 / +1
Query: 1167 GLWDDRGRPGALDVHGVCQGAVTGEVRCLRHGGEECRAKDHRPGDRAVPPPQPARGDLHQ 1346
G+ DD GR GA V GV QGAV G+VR +RHGG + RA+D RP R +P +P R DLH
Sbjct: 109 GVRDDGGRAGAGHVPGVRQGAVQGQVRVVRHGGAQRRAQDRRPRHRRLPRAEPTRRDLHP 288
Query: 1347 GQAVDERVPQQPGGNGEDHRLGGVA 1421
A ER+P +P + E HR G +A
Sbjct: 289 WGANHERLPYRPIIHQEHHRQGWLA 363
Score = 86.3 bits (182), Expect = 5e-016
Identities = 44/91 (48%), Positives = 49/91 (53%)
Frame = -3 / -1
Query: 1438 QCLRCAATPPSRWSSPLPPGC*GTLSSTACP*CKSPRAGCGGGTARSPGR*SLARHSSPP 1259
+C RC A+ P RW S G *G LS A C+S R G G R G S AR +PP
Sbjct: 380 RCFRCPASHPCRWCSWWIMGR*GNLS*FAPHGCRSRRVGSARGRRRCRGLRS*ARRCAPP 201
Query: 1258 CRRHRTSPVTAPWQTPCTSRAPGLPLSSHNP 1166
CR RT P TAPW+TP T AP P SS P
Sbjct: 200 CRTTRT*P*TAPWRTPGTWPAPARPPSSRTP 108
>gb|BG414540.1|BG414540 HVSMEk0002N03f Hordeum vulgare testa/pericarp EST library HVcDNA0013
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEk0002N03f, mRNA sequence
Length = 876
Score = 195 bits (420), Expect(3) = 4e-066
Identities = 71/126 (56%), Positives = 104/126 (82%)
Frame = +1 / +3
Query: 1411 EGWLHTGDIGYVDDGDEIFIVDRLKELIKYKGFQVAPAELEAMLIAHPSIVDAAVVQMKD 1590
+GWLHTGD+GY D+ ++F+VDRLKELIKYKGFQ+APAELE +L++HP I+DA V+ D
Sbjct: 294 QGWLHTGDLGYFDEEGQLFVVDRLKELIKYKGFQIAPAELEGLLLSHPEILDAVVIPFPD 473
Query: 1591 DSCGEIPVAFVVASGGSGITEDEIKQYVAKQVVFYKRLHKIFFVEAIPKAPSGKILRKDL 1770
D GE+P+A+VV S S +TE ++++++AKQV +YKRL ++ FVE++PK+ +GKILR++L
Sbjct: 474 DEAGEVPIAYVVRSPASSLTEVDVQKFIAKQVTYYKRLRRVTFVESVPKSAAGKILRREL 653
Query: 1771 RAKLAS 1788
A++ S
Sbjct: 654 IAQVRS 671
Score = 100 bits (213), Expect(3) = 1e-030
Identities = 57/125 (45%), Positives = 63/125 (50%)
Frame = -2 / -3
Query: 1787 DASFALRSFLKILPDGALGMASTKKILCSLL*NTTCFATYCLISSSVIPEPPDATTNATG 1608
D + A+ S LKILP G STK SLL* TC A S+SV D TT A G
Sbjct: 670 DLTCAMSSLLKILPAADFGTLSTKVTRLSLL*YVTCLAINFWTSTSVNELAGDLTT*AIG 491
Query: 1607 ISPQESSFIWTTAASTMLGWXXXXXXXXXXATWNPLYLMSSLSRSTMKISSPSSTYPMSP 1428
SP SS T AS + G A W PLYL+SS S ST K SS YP SP
Sbjct: 490 TSPASSSGNGITTASRISG*DRSNPSSSAGAIWKPLYLISSFSLSTTKSWPSSSKYPRSP 311
Query: 1427 VCSHP 1413
VC+HP
Sbjct: 310 VCNHP 296
Score = 64.8 bits (135), Expect(3) = 4e-066
Identities = 29/53 (54%), Positives = 35/53 (66%)
Frame = +1 / +3
Query: 1246 GACGTVVRNAELKIIDPETGLSLHRNQPGEICIRGKQLMKGYLNNPEATAKTI 1404
G+ GT+V E K+ID ET L +Q GEICIRG +M+GY NN EAT TI
Sbjct: 132 GSTGTLVVGVEAKVIDVETQKHLPPSQLGEICIRGPHIMQGYFNNVEATEFTI 290
Score = 47.8 bits (98), Expect(3) = 1e-030
Identities = 26/54 (48%), Positives = 34/54 (62%)
Frame = -2 / -3
Query: 1403 MVFAVASGLLRYPFINCLPLMQISPGWLRWRDSPVSGSMIFSSAFLTTVPQAPD 1242
+V +VAS LL+YP I C P +QISP L R VS S+ F+S T+VP P+
Sbjct: 289 IVNSVASTLLKYPCIMCGPRIQISPS*LGGRCFCVSTSITFASTPTTSVPVDPN 128
Score = 32.2 bits (64), Expect(3) = 4e-066
Identities = 11/32 (34%), Positives = 21/32 (65%)
Frame = +1 / +3
Query: 1111 GKELQDLLRAKLPRAVLGQGYGMTEAGPVLSM 1206
G+++ +++ P A + QGYGMTE ++S+
Sbjct: 3 GRDVMEVVAKNFPDAEIVQGYGMTETCGIISL 98
Score = 24.4 bits (47), Expect(3) = 1e-030
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -2 / -3
Query: 1184 SVIP*PCPSTARGSLARSRSCSSLP 1110
SVIP*P +A G + S +SLP
Sbjct: 76 SVIP*P*TISASGKFLATTSMTSLP 2
>gb|CB882386.1|CB882386 HL01L15w HL Hordeum vulgare subsp. vulgare cDNA clone HL01L15
3-PRIME, mRNA sequence
Length = 490
Score = 236 bits (509), Expect = 4e-061
Identities = 95/133 (71%), Positives = 113/133 (84%)
Frame = +1 / +1
Query: 1411 EGWLHTGDIGYVDDGDEIFIVDRLKELIKYKGFQVAPAELEAMLIAHPSIVDAAVVQMKD 1590
+GWLHTGDIGYVDD DEIFIVDRLKE+IKYKGFQV PAELEA+LI H I DAAVV M+D
Sbjct: 7 DGWLHTGDIGYVDDDDEIFIVDRLKEIIKYKGFQVPPAELEALLITHAEIKDAAVVSMQD 186
Query: 1591 DSCGEIPVAFVVASGGSGITEDEIKQYVAKQVVFYKRLHKIFFVEAIPKAPSGKILRKDL 1770
+ GE+PVAF+V GS I+E EIKQ+VAK+VVFYKR+HK+FF +++PK+P+GKILRKDL
Sbjct: 187 ELTGEVPVAFIVRIEGSEISESEIKQFVAKEVVFYKRIHKVFFADSVPKSPAGKILRKDL 366
Query: 1771 RAKLASGFSNGSS 1809
RAKLA+G S
Sbjct: 367 RAKLAAGIPGSGS 405
Score = 158 bits (339), Expect = 1e-037
Identities = 78/127 (61%), Positives = 83/127 (65%)
Frame = -2 / -3
Query: 1790 PDASFALRSFLKILPDGALGMASTKKILCSLL*NTTCFATYCLISSSVIPEPPDATTNAT 1611
P ASFALRSFL+ILP G G S KK L LL* TT FAT CLIS S+I EP T NAT
Sbjct: 386 PAASFALRSFLRILPAGLFGTESAKKTLWILL*KTTSFATNCLISLSLISEPSIRTMNAT 207
Query: 1610 GISPQESSFIWTTAASTMLGWXXXXXXXXXXATWNPLYLMSSLSRSTMKISSPSSTYPMS 1431
G SP SS I TTAAS + TWNPLYL+ SLS STMKISS SST PMS
Sbjct: 206 GTSPVSSSCIDTTAASLISACVMRRASSSAGGTWNPLYLIISLSLSTMKISSSSST*PMS 27
Query: 1430 PVCSHPS 1410
PVC+ PS
Sbjct: 26 PVCNQPS 6
Score = 66.1 bits (138), Expect = 6e-010
Identities = 34/88 (38%), Positives = 48/88 (54%)
Frame = -1 / -2
Query: 1782 QLCSQILP*NLAGWRLGDGLHEEDLVQPLVEHHLFRHVLLDLVLGDPGAAGRHDERHRDL 1603
+LCSQ+LP +LAG L + + +E+ V P VE++LF + LLDL L D A H+E +
Sbjct: 378 ELCSQVLPEDLAGRTLRNRVRKENFVDPFVENNLFCNKLLDLALADLRAFNPHNECNWYF 199
Query: 1602 AAGVILHLXXXXXXXXXXXDEHGLELRR 1519
+ ILH +E G E RR
Sbjct: 198 TSKFILHRYNSSIFDFSVCNEKGFEFRR 115
Score = 31.3 bits (62), Expect(2) = 2.2
Identities = 18/40 (45%), Positives = 23/40 (57%)
Frame = +3 / +3
Query: 1662 QAVRGETGGVLQEAAQDLLRGGHPQGAIRQDFKEGSESKA 1781
QAV + G LQ+ Q L G + + RQD +EG ESKA
Sbjct: 258 QAVCCKRGCFLQKDPQSFLCGLGSEESCRQDPQEGPESKA 377
Score = 23.5 bits (45), Expect(2) = 2.2
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +3 / +3
Query: 1479 AQGAHQVQGVPSRSGG 1526
AQ +Q+QG+PS S G
Sbjct: 75 AQRDNQIQGIPSTSCG 122
>gb|BF064865.2|BF064865 HV_CEb0021D12f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0021D12f, mRNA sequence
Length = 806
Score = 228 bits (493), Expect = 7e-059
Identities = 93/175 (53%), Positives = 122/175 (69%)
Frame = +1 / +3
Query: 1246 GACGTVVRNAELKIIDPETGLSLHRNQPGEICIRGKQLMKGYLNNPEATAKTIDSEGWLH 1425
G G + N E KI+DPETG +L N+ GE+ IRG +MKGY N EAT T+ +GWL
Sbjct: 75 GTAGLLSPNTEAKIVDPETGEALPVNRTGELWIRGPYVMKGYFKNTEATQSTVTPDGWLK 254
Query: 1426 TGDIGYVDDGDEIFIVDRLKELIKYKGFQVAPAELEAMLIAHPSIVDAAVVQMKDDSCGE 1605
TGD+ Y+D+ +F+VDRLKELIKYKG+QV PAELEA+L+ HP + D AV+ D G+
Sbjct: 255 TGDLCYIDEDGYLFVVDRLKELIKYKGYQVPPAELEALLLTHPEVSDVAVIPFPDREVGQ 434
Query: 1606 IPVAFVVASGGSGITEDEIKQYVAKQVVFYKRLHKIFFVEAIPKAPSGKILRKDL 1770
P+A+VV GS ++ E+ ++VAKQV YK++ K+ FV IPK SGKILRKDL
Sbjct: 435 FPMAYVVRKKGSNLSAQEVMEFVAKQVAPYKKVRKVAFVTDIPKNASGKILRKDL 599
Score = 121 bits (259), Expect = 1e-026
Identities = 74/176 (42%), Positives = 85/176 (48%)
Frame = -2 / -2
Query: 1772 LRSFLKILPDGALGMASTKKILCSLL*NTTCFATYCLISSSVIPEPPDATTNATGISPQE 1593
+RSFL ILPD LGM+ T + L* TCFAT + S + P TT A G P
Sbjct: 601 IRSFLSILPDAFLGMSVTNATFLTFL*GATCFATNSITSCADKLLPFFLTT*AIGN*PTS 422
Query: 1592 SSFIWTTAASTMLGWXXXXXXXXXXATWNPLYLMSSLSRSTMKISSPSSTYPMSPVCSHP 1413
S TA S GW T PLYL++S RST K SS SPV SHP
Sbjct: 421 LSGNGITATSETSGWVSRRASNSAGGT**PLYLINSFRRSTTKRYPSSSM*HRSPVLSHP 242
Query: 1412 SESMVFAVASGLLRYPFINCLPLMQISPGWLRWRDSPVSGSMIFSSAFLTTVPQAP 1245
S V VAS L+YPF+ PL+Q SP SPVSGS I +S P P
Sbjct: 241 SGVTVDCVASVFLKYPFMT*GPLIQSSPVRFTGSASPVSGSTILASVLGDRSPAVP 74
Score = 45.1 bits (92), Expect(3) = 1e-007
Identities = 23/55 (41%), Positives = 32/55 (58%)
Frame = -1 / -1
Query: 1434 VSGVQPPLRVDGLRRCLRVVEVPFHQLLAPDANLPGLVAVEGQPGLRVDDL*LGI 1270
V+G++P + CL V+EV FH + +PD L G V + LRVDDL LG+
Sbjct: 263 VTGLEPSVGRHRRLCCLCVLEVSFHDVGSPDPELAGAVHRQRLACLRVDDLGLGV 99
Score = 39.1 bits (79), Expect(2) = 2e-006
Identities = 17/34 (50%), Positives = 21/34 (61%)
Frame = +3 / +2
Query: 1668 VRGETGGVLQEAAQDLLRGGHPQGAIRQDFKEGS 1769
V GETG LQE + +R HPQ + QD +EGS
Sbjct: 497 VCGETGSTLQEGEEGGVRDRHPQECVWQDTEEGS 598
Score = 37.7 bits (76), Expect(2) = 2e-006
Identities = 18/42 (42%), Positives = 22/42 (52%)
Frame = +3 / +2
Query: 1275 RAKDHRPGDRAVPPPQPARGDLHQGQAVDERVPQQPGGNGED 1400
R +D RPGDR +P R L QG ER+ Q+ GN D
Sbjct: 104 RGQDRRPGDRRGAAGEPHRRALDQGTLRHERILQEHRGNTVD 229
Score = 33.1 bits (66), Expect(3) = 1e-007
Identities = 19/39 (48%), Positives = 22/39 (56%)
Frame = -1 / -1
Query: 1770 QILP*NLAGWRLGDGLHEEDLVQPLVEHHLFRHVLLDLV 1654
+ILP LA LGD HE L LV +LFRH L L+
Sbjct: 599 KILPQYLARRILGDVCHERHLPHLLVRCYLFRHKLHHLL 483
Score = 21.7 bits (41), Expect(3) = 1e-007
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -1 / -2
Query: 996 AVPLHQLEHAESVEA 952
AVP +L AESV+A
Sbjct: 82 AVPYRRLSSAESVDA 38
>gb|BE519742.1|BE519742 HV_CEb0021A20f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0021A20f, mRNA sequence
Length = 726
Score = 172 bits (371), Expect(2) = 8e-059
Identities = 68/103 (66%), Positives = 88/103 (85%)
Frame = +1 / +2
Query: 730 LPYSSGTTGLPKGVMLSHRGLVTSVAQLVDGDNPNLHFREDDVVLCVLPMFHVYSLHSIL 909
LPYSSGTTGLPKGVML+HR L+TSVAQ VDG+NPNL+FR++DV+LC+LP+FH+YSL+S+L
Sbjct: 413 LPYSSGTTGLPKGVMLTHRSLITSVAQQVDGENPNLYFRKEDVLLCLLPLFHIYSLNSVL 592
Query: 910 LCGMRAGAALVIMKRFDTLRMFELVKRHGITIVPLVLPIAVEM 1038
L G+RAG+A+VIM++FD + ELV+ HGI P PI VE+
Sbjct: 593 LAGLRAGSAMVIMRKFDIGALVELVRAHGINGAPFGPPIVVEI 721
Score = 132 bits (282), Expect(2) = 7e-041
Identities = 61/104 (58%), Positives = 67/104 (64%)
Frame = -2 / -1
Query: 1043 LTISTAMGSTSGTIVMPCLFTSSNMRRVSKRFMITSAAPARIPHSRMECSEYTWNMGSTQ 864
L IST MG G +MPC TSS +S MIT A PAR P S E SE WN GS
Sbjct: 726 LAISTTMGGPKGAPLMPCARTSSTSAPMSNLRMITIADPARSPASSTELSE*MWNSGSRH 547
Query: 863 RTTSSSRKWRFGLSPSTSCATLVTSPRCDSITPLGSPVVPDEYG 732
+TSS K+RFG SPST CATLV RC S+TPLGSPVVP+EYG
Sbjct: 546 SSTSSFLKYRFGFSPSTCCATLVMRLRCVSMTPLGSPVVPEEYG 415
Score = 79.9 bits (168), Expect(2) = 8e-059
Identities = 37/72 (51%), Positives = 47/72 (65%)
Frame = +1 / +2
Query: 343 LSRRVAAGMRACLGVRSGGTVMLLLPNSVEFALAFLACSRLGAAATTANPLHTPPEIAKQ 522
+ R AA +GV G VM LL N EFA +FL +RLGAA TTANP +TP EI +Q
Sbjct: 32 IKRARAAAGLRRMGVGKGDVVMNLLRNCPEFAFSFLGAARLGAATTTANPFYTPHEIHRQ 211
Query: 523 AAASGATVVITE 558
A A+GA +++TE
Sbjct: 212 ADAAGAMLIVTE 247
Score = 62.5 bits (130), Expect(3) = 1e-011
Identities = 28/55 (50%), Positives = 31/55 (56%)
Frame = -1 / -3
Query: 1035 LHRDGQHERHDRDAVPLHQLEHAESVEALHDHERRAGAHPAQQDGVQRVHVEHGQ 871
LH +G+ E DAV HQL VE HDH RR GA P QQ V+RV VE Q
Sbjct: 718 LHHNGRPEGRPVDAVRAHQLHQRADVELAHDHHRRPGAQPRQQHRVERVDVEQRQ 554
Score = 60.6 bits (126), Expect(2) = 7e-041
Identities = 33/70 (47%), Positives = 39/70 (55%)
Frame = -2 / -1
Query: 557 SVMTTVAPEAAACLAISGGVWSGLAVVAAAPRREHARNASANSTEFGRSSITVPPLRTPR 378
SV ++AP A+AC IS GV GLAVV AAPRR R ANS + +T PL TP
Sbjct: 246 SVTMSMAPAASACRWISCGV*KGLAVVVAAPRRAAPRKEKANSGQLRSRFMTTSPLPTPI 67
Query: 377 QARIPAATRR 348
+ AA R
Sbjct: 66 RRSPAAARAR 37
Score = 27.2 bits (53), Expect(3) = 1e-011
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = -2 / -1
Query: 473 AAPRREHARNASANSTEFGRSSITVPPLRTPRQAR 369
AAPR+E A + S S + P R+P AR
Sbjct: 147 AAPRKEKANSGQLRSRFMTTSPLPTPIRRSPAAAR 43
Score = 24.4 bits (47), Expect(3) = 1e-011
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -1 / -3
Query: 801 AGYQPTVRQHHPLGQP 754
AG + VR+H LGQP
Sbjct: 484 AGDEAAVREHDALGQP 437
>gb|AV916926.1|AV916926 AV916926 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags20b24 5', mRNA sequence
Length = 547
Score = 164 bits (352), Expect(3) = 2e-056
Identities = 58/101 (57%), Positives = 83/101 (82%)
Frame = +1 / +2
Query: 1411 EGWLHTGDIGYVDDGDEIFIVDRLKELIKYKGFQVAPAELEAMLIAHPSIVDAAVVQMKD 1590
+GWLHTGD+GY D+ ++F+VDRLKELIKYKGFQ+APAELE +L++HP I+DA V+ D
Sbjct: 176 QGWLHTGDLGYFDEEGQLFVVDRLKELIKYKGFQIAPAELEGLLLSHPEILDAVVIPFPD 355
Query: 1591 DSCGEIPVAFVVASGGSGITEDEIKQYVAKQVVFYKRLHKI 1713
D GE+P+A+VV S S +TE ++++++AKQV +YKRL ++
Sbjct: 356 DEAGEVPIAYVVRSPASSLTEVDVQKFIAKQVTYYKRLRRV 478
Score = 79.9 bits (168), Expect(3) = 4e-024
Identities = 45/97 (46%), Positives = 49/97 (50%)
Frame = -2 / -2
Query: 1703 SLL*NTTCFATYCLISSSVIPEPPDATTNATGISPQESSFIWTTAASTMLGWXXXXXXXX 1524
SLL* TC A S+SV D TT A G SP SS T AS + G
Sbjct: 468 SLL*YVTCLAINFWTSTSVNELAGDLTT*AIGTSPASSSGNGITTASRISG*DRSNPSSS 289
Query: 1523 XXATWNPLYLMSSLSRSTMKISSPSSTYPMSPVCSHP 1413
A W PLYL+SS S ST K SS YP SPVC+HP
Sbjct: 288 AGAIWKPLYLISSFSLSTTKSWPSSSKYPRSPVCNHP 178
Score = 62.0 bits (129), Expect(3) = 2e-056
Identities = 28/50 (56%), Positives = 33/50 (66%)
Frame = +1 / +2
Query: 1255 GTVVRNAELKIIDPETGLSLHRNQPGEICIRGKQLMKGYLNNPEATAKTI 1404
GT+V E K+ID ET L +Q GEICIRG +M+GY NN EAT TI
Sbjct: 23 GTLVVGVEAKVIDVETQKHLPPSQLGEICIRGPHIMQGYFNNVEATEFTI 172
Score = 46.0 bits (94), Expect(3) = 4e-024
Identities = 25/50 (50%), Positives = 32/50 (64%)
Frame = -2 / -2
Query: 1403 MVFAVASGLLRYPFINCLPLMQISPGWLRWRDSPVSGSMIFSSAFLTTVP 1254
+V +VAS LL+YP I C P +QISP L R VS S+ F+S T+VP
Sbjct: 171 IVNSVASTLLKYPCIMCGPRIQISPS*LGGRCFCVSTSITFASTPTTSVP 22
Score = 33.1 bits (66), Expect(3) = 2e-056
Identities = 12/21 (57%), Positives = 19/21 (90%)
Frame = +1 / +3
Query: 1717 FVEAIPKAPSGKILRKDLRAK 1779
FVE++PK+ +GKILR++L A+
Sbjct: 483 FVESVPKSAAGKILRRELIAQ 545
Score = 24.4 bits (47), Expect(3) = 4e-024
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = -2 / -1
Query: 1775 ALRSFLKILPDGALGMASTK 1716
A+ S LKILP G STK
Sbjct: 541 AMSSLLKILPAADFGTLSTK 482
>gb|AL507037.1|AL507037 AL507037 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY04P21T 5',
mRNA sequence
Length = 700
Score = 185 bits (398), Expect(2) = 2e-053
Identities = 77/109 (70%), Positives = 93/109 (85%)
Frame = +1 / -2
Query: 1459 EIFIVDRLKELIKYKGFQVAPAELEAMLIAHPSIVDAAVVQMKDDSCGEIPVAFVVASGG 1638
++ IVDR+KELIK+KGFQV PAELEA LIAHPSI DAAVV KDD+ GE+PVAFVV +
Sbjct: 627 KVXIVDRVKELIKFKGFQVPPAELEAXLIAHPSIADAAVVPQKDDAAGEVPVAFVVRAAD 448
Query: 1639 SGITEDEIKQYVAKQVVFYKRLHKIFFVEAIPKAPSGKILRKDLRAKLA 1785
S I E+ IK++V+KQVVFYKRLHK++F AIPK+ SGKILRK+LRAKL+
Sbjct: 447 SDIAEEAIKEFVSKQVVFYKRLHKVYFTHAIPKSASGKILRKELRAKLS 301
Score = 121 bits (258), Expect(2) = 9e-031
Identities = 60/106 (56%), Positives = 65/106 (61%)
Frame = -2 / +2
Query: 1781 SFALRSFLKILPDGALGMASTKKILCSLL*NTTCFATYCLISSSVIPEPPDATTNATGIS 1602
S AL SFL I PD LG+A K LCSLL*NTTC T L++SS + E TTNATG S
Sbjct: 305 SLALSSFLSIFPDADLGIAWVKYTLCSLL*NTTCLDTNSLMASSAMSESAARTTNATGTS 484
Query: 1601 PQESSFIWTTAASTMLGWXXXXXXXXXXATWNPLYLMSSLSRSTMK 1464
P SSF TTAAS M G TW PL LMSSL+RST K
Sbjct: 485 PAASSFCGTTAASAMEGCAMSXASSSAGGTWKPLNLMSSLTRSTXK 622
Score = 77.6 bits (163), Expect(3) = 5e-017
Identities = 36/63 (57%), Positives = 41/63 (65%)
Frame = -1 / +1
Query: 1773 SQILP*NLAGWRLGDGLHEEDLVQPLVEHHLFRHVLLDLVLGDPGAAGRHDERHRDLAAG 1594
S++ P L RLGD + E LVQPLVEHHL + LLD +LGD G H ERHRDL G
Sbjct: 313 SELFPQYLPRRRLGDRVGEVHLVQPLVEHHLLGYELLDGLLGDVRIGGAHHERHRDLTGG 492
Query: 1593 VIL 1585
VIL
Sbjct: 493 VIL 501
Score = 45.5 bits (93), Expect(2) = 2e-053
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = +1 / -3
Query: 1396 KTIDSEGWLHTGDIGYVDD 1452
+ ID EGWLHTGDIGYVDD
Sbjct: 692 RPIDVEGWLHTGDIGYVDD 636
Score = 40.5 bits (82), Expect(2) = 2e-005
Identities = 18/39 (46%), Positives = 26/39 (66%)
Frame = +3 / -1
Query: 1662 QAVRGETGGVLQEAAQDLLRGGHPQGAIRQDFKEGSESK 1778
Q VR + GGVLQEAAQ +L PQ + +D +E ++S+
Sbjct: 424 QGVRIQAGGVLQEAAQGVLHPRDPQVGVGEDTEERAQSQ 308
Score = 34.1 bits (68), Expect(2) = 9e-031
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = -2 / +1
Query: 1451 SSTYPMSPVCSHPSESM 1401
SST PMSPV SHPS SM
Sbjct: 637 SSTXPMSPVWSHPSTSM 687
Score = 32.7 bits (65), Expect(2) = 2e-005
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +3 / -1
Query: 1476 PAQGAHQVQGVPSRSGGA 1529
P QGAHQVQG+P +G A
Sbjct: 610 PRQGAHQVQGLPGAAGRA 557
Score = 24.4 bits (47), Expect(3) = 5e-017
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = -3 / +2
Query: 1438 QCLRCAATPPSRW 1400
+C RC ATP +W
Sbjct: 650 RCRRCGATPRRQW 688
Score = 24.0 bits (46), Expect(3) = 5e-017
Identities = 14/23 (60%), Positives = 15/23 (65%)
Frame = -3 / +3
Query: 1543 *AWPRAPPERLGTPCT**AP*AG 1475
*A P A P G+P T**AP* G
Sbjct: 543 *AXPPARPAAPGSP*T**AP*RG 611
>gb|AV918175.1|AV918175 AV918175 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags20b24 3', mRNA sequence
Length = 664
Score = 136 bits (292), Expect(3) = 9e-051
Identities = 51/102 (50%), Positives = 79/102 (77%)
Frame = +1 / -3
Query: 1483 KELIKYKGFQVAPAELEAMLIAHPSIVDAAVVQMKDDSCGEIPVAFVVASGGSGITEDEI 1662
K + KGFQ+APAELE +L++HP I+DA V+ DD GE+P+A+VV S S +TE ++
Sbjct: 518 KS*LSTKGFQIAPAELEGLLLSHPEILDAVVIPFPDDEAGEVPIAYVVRSPASSLTEVDV 339
Query: 1663 KQYVAKQVVFYKRLHKIFFVEAIPKAPSGKILRKDLRAKLAS 1788
++++AKQV +YKRL ++ FVE++PK+ +GKILR++L A++ S
Sbjct: 338 QKFIAKQVTYYKRLRRVTFVESVPKSAAGKILRRELIAQVRS 213
Score = 65.2 bits (136), Expect(3) = 9e-051
Identities = 23/33 (69%), Positives = 29/33 (87%)
Frame = +1 / -2
Query: 1411 EGWLHTGDIGYVDDGDEIFIVDRLKELIKYKGF 1509
+GWLHTGD+GY + ++F+VDRLKELIKYKGF
Sbjct: 591 QGWLHTGDLGYFE*EGQLFVVDRLKELIKYKGF 493
Score = 59.7 bits (124), Expect(3) = 1e-019
Identities = 39/98 (39%), Positives = 43/98 (43%)
Frame = -2 / +1
Query: 1787 DASFALRSFLKILPDGALGMASTKKILCSLL*NTTCFATYCLISSSVIPEPPDATTNATG 1608
D + A+ S LKILP G STK SLL* TC A S+SV D TT A G
Sbjct: 214 DLTCAMSSLLKILPAADFGTLSTKVTRLSLL*YVTCLAINFWTSTSVNELAGDLTT*AIG 393
Query: 1607 ISPQESSFIWTTAASTMLGWXXXXXXXXXXATWNPLYL 1494
SP SS T AS + G A W P L
Sbjct: 394 TSPASSSGNGITTASRISG*DRSNPSSSAGAIWKPFVL 507
Score = 48.3 bits (99), Expect(3) = 1e-019
Identities = 20/32 (62%), Positives = 22/32 (68%)
Frame = -2 / +2
Query: 1508 NPLYLMSSLSRSTMKISSPSSTYPMSPVCSHP 1413
NPLYL+SS S ST K S YP SPVC+HP
Sbjct: 494 NPLYLISSFSLSTTKSWPSYSKYPRSPVCNHP 589
Score = 38.6 bits (78), Expect(3) = 9e-051
Identities = 15/25 (60%), Positives = 18/25 (72%)
Frame = +1 / -1
Query: 1336 ICIRGKQLMKGYLNNPEATAKTIDS 1410
ICIRG +M+GY NN EAT TI +
Sbjct: 664 ICIRGPHIMQGYFNNVEATEFTIQA 590
Score = 27.2 bits (53), Expect(3) = 1e-019
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = -2 / +3
Query: 1403 MVFAVASGLLRYPFINCLPLMQ 1338
+V +VAS LL+YP I C P +Q
Sbjct: 597 IVNSVASTLLKYPCIMCGPRIQ 662
>gb|BF260187.2|BF260187 HVSMEf0021F10f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEf0021F10f, mRNA sequence
Length = 859
Score = 197 bits (425), Expect(2) = 2e-050
Identities = 81/133 (60%), Positives = 102/133 (76%)
Frame = +1 / +2
Query: 934 ALVIMKRFDTLRMFELVKRHGITIVPLVLPIAVEMVKSDAIDRHDLSSVRMVISGAAPMG 1113
A+VIM++FD + LV+ HG+T+ P V PI VE+ +D + DL+ +RMV+SGAAPMG
Sbjct: 2 AIVIMRKFDHGALVRLVRAHGVTVAPFVPPIVVEIXFNDRVTGGDLAFIRMVMSGAAPMG 181
Query: 1114 KELQDLLRAKLPRAVLGQGYGMTEAGPVLSMCMAFAKEPLPVKSGACGTVVRNAELKIID 1293
K+LQD K+P AVLGQGYGMTE GPVLSMC+AFAKEP V+SG+CGT VRNA+LKI+D
Sbjct: 182 KDLQDAFMGKIPNAVLGQGYGMTEGGPVLSMCLAFAKEPFGVQSGSCGTGVRNADLKIVD 361
Query: 1294 PETGLSLHRNQPG 1332
P+TG L RN G
Sbjct: 362 PDTGAFLGRNLAG 400
Score = 152 bits (326), Expect = 7e-036
Identities = 76/133 (57%), Positives = 81/133 (60%)
Frame = -2 / -2
Query: 1331 PGWLRWRDSPVSGSMIFSSAFLTTVPQAPDFTGNGSLANAMHIESTGPASVIP*PCPSTA 1152
P R R +PVSGS I SAF T VPQ PD+T NGSLANA H++STGP SVIP PCPSTA
Sbjct: 399 PARFRPRKAPVSGSTILRSAFRTPVPQDPDWTPNGSLANARHMDSTGPPSVIPYPCPSTA 220
Query: 1151 RGSLARSRSCSSLPMGAAPEMTMRTDERSWRSMASLLTISTAMGSTSGTIVMPCLFTSSN 972
G L S SLPMGAAP+MTMR RS SL IST MG T G V PC T
Sbjct: 219 LGILPMKAS*RSLPMGAAPDMTMRMKARSPPVTRSLNXISTTMGGTKGATVTPCARTRRT 40
Query: 971 MRRVSKRFMITSA 933
S MIT A
Sbjct: 39 SAPWSNLRMITIA 1
Score = 133 bits (285), Expect = 3e-030
Identities = 60/133 (45%), Positives = 78/133 (58%)
Frame = -1 / -1
Query: 1332 PGLVAVEGQPGLRVDDL*LGIPHHRAAGTGLHR*RLLGKRHAHREHRACLCHPITLSEHG 1153
PG V + PG+ V+D + +PH RAAG L RLLG+R AH +HR L HP+ LS+HG
Sbjct: 400 PGKVPAKEGPGVGVNDFKIRVPHPRAAGPRLDAERLLGERQAHGQHRPALRHPVPLSKHG 221
Query: 1152 ARELGAQQVLQLLAHGRGPRDDHAHRREVVAVDGVALDHLHRDGQHERHDRDAVPLHQLE 973
+L + VL++LAHGRG DHA+ +V A V +L DG+HE D V HQ
Sbjct: 220 VGDLAHEGVLKVLAHGRGAGHDHANEGKVAAGHPVVKXNLDDDGRHEGRHGDPVRAHQAH 41
Query: 972 HAESVEALHDHER 934
VE HDH+R
Sbjct: 40 QRAVVELAHDHDR 2
Score = 80.8 bits (170), Expect = 2e-014
Identities = 40/82 (48%), Positives = 43/82 (52%)
Frame = +2 / +3
Query: 1085 WSSRGPRPWARSCRTCCAPSSLAPCSDRVMG*QRQARCSRCAWRLPRSRYR*SPVPAARW 1264
WS PRPWAR+ RT S PC DR G*+R RC CAWR PRSR S PAAR
Sbjct: 153 WSCPAPRPWARTFRTPSWARSPTPCLDRGTG*RRAGRCCPCAWRSPRSRSASSRGPAARG 332
Query: 1265 *GMPS*RSSTRRPGCPSTATSP 1330
G +S T PG T P
Sbjct: 333 CGTRILKSLTPTPGPSLAGTLP 398
Score = 60.6 bits (126), Expect(2) = 2e-008
Identities = 29/57 (50%), Positives = 35/57 (61%)
Frame = +3 / +1
Query: 1164 TGLWDDRGRPGALDVHGVCQGAVTGEVRCLRHGGEECRAKDHRPGDRAVPPPQPARG 1334
TG+ DD GR GA+ V GV QGAV V LRHGG E + + P R +P P+P RG
Sbjct: 232 TGVRDDGGRAGAVHVPGVRQGAVRRPVGVLRHGGAERGS*NR*PRHRGLPWPEPCRG 402
Score = 59.3 bits (123), Expect = 7e-008
Identities = 28/57 (49%), Positives = 31/57 (54%)
Frame = -3 / -3
Query: 1333 PRAGCGGGTARSPGR*SLARHSSPPCRRHRTSPVTAPWQTPCTSRAPGLPLSSHNPV 1163
PR G G G R G+ S+PPCRR T TAPW+TP T AP P SS PV
Sbjct: 401 PRQGSGQGRPRCRGQRF*DPRSAPPCRRTPTGRRTAPWRTPGTWTAPARPPSSRTPV 231
Score = 49.2 bits (101), Expect = 8e-005
Identities = 20/33 (60%), Positives = 23/33 (69%)
Frame = +1 / +3
Query: 1279 LKIIDPETGLSLHRNQPGEICIRGKQLMKGYLN 1377
LK + P G SL PGEIC RGKQ+MKG+LN
Sbjct: 348 LKSLTPTPGPSLAGTLPGEICFRGKQIMKGFLN 446
Score = 32.7 bits (65), Expect(2) = 0.35
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = -2 / -1
Query: 1376 LRYPFINCLPLMQISPGWLRWRDSPVSG 1293
LR PFI C P QISPG + ++ P G
Sbjct: 445 LRKPFIICFPRKQISPGKVPAKEGPGVG 362
Score = 25.8 bits (50), Expect(2) = 0.35
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = -2 / -3
Query: 995 PCLFTSSNMRRVSKRFMITSAAPARIPHSRMECSEYTW 882
PC T + R R T APAR P SR W
Sbjct: 329 PCRRTPTGRRTAPWRTPGTWTAPARPPSSRTPVQARRW 216
Score = 23.1 bits (44), Expect(2) = 2e-050
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +1 / +2
Query: 1417 WLHTGDIGYVDD 1452
WL GDI Y DD
Sbjct: 488 WLTLGDIRYCDD 523
Score = 23.1 bits (44), Expect(2) = 2e-008
Identities = 7/14 (50%), Positives = 8/14 (57%)
Frame = +2 / +3
Query: 1085 WSSRGPRPWARSCR 1126
W +R PW SCR
Sbjct: 48 WCARTGSPWRPSCR 89
>gb|BI959839.1|BI959839 HVSMEn0021P10f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0021P10f,
mRNA sequence
Length = 657
Score = 143 bits (306), Expect(2) = 5e-048
Identities = 57/83 (68%), Positives = 71/83 (85%)
Frame = +1 / -1
Query: 1543 IAHPSIVDAAVVQMKDDSCGEIPVAFVVASGGSGITEDEIKQYVAKQVVFYKRLHKIFFV 1722
I HP I DAAVV +KDD GE+P+AFV+ GS ITED+IK++VAK+VVFYKR+HK+FF
Sbjct: 552 ITHPEIKDAAVVSLKDDLAGEVPIAFVMRIEGSEITEDDIKKFVAKEVVFYKRIHKVFFT 373
Query: 1723 EAIPKAPSGKILRKDLRAKLASG 1791
++IPK PSGKILRKDLRA+LA+G
Sbjct: 372 DSIPKNPSGKILRKDLRARLAAG 304
Score = 99.1 bits (210), Expect(2) = 8e-028
Identities = 49/81 (60%), Positives = 55/81 (67%)
Frame = -2 / +2
Query: 1790 PDASFALRSFLKILPDGALGMASTKKILCSLL*NTTCFATYCLISSSVIPEPPDATTNAT 1611
P AS AL+SFL+ILP+G LG+ S KK L LL* TT FAT L+SSSVI EP T A
Sbjct: 305 PAASLALKSFLRILPEGFLGIESVKKTLWILL*KTTSFATNFLMSSSVISEPSIRITKAI 484
Query: 1610 GISPQESSFIWTTAASTMLGW 1548
G SP SSF TTAAS + GW
Sbjct: 485 GTSPARSSFSDTTAASLISGW 547
Score = 69.8 bits (146), Expect(2) = 5e-048
Identities = 29/31 (93%), Positives = 30/31 (96%)
Frame = +1 / -3
Query: 1444 VDDGDEIFIVDRLKELIKYKGFQVAPAELEA 1536
VDD DEIFIVDRLKE+IKYKGFQVAPAELEA
Sbjct: 652 VDDDDEIFIVDRLKEIIKYKGFQVAPAELEA 560
Score = 66.1 bits (138), Expect(2) = 3e-012
Identities = 34/80 (42%), Positives = 49/80 (61%)
Frame = -1 / +1
Query: 1824 SGASTR*PVGESRRQLCSQILP*NLAGWRLGDGLHEEDLVQPLVEHHLFRHVLLDLVLGD 1645
SG + G++ + SQ+LP +LA LGD + EEDLV PLVE++L R D++LGD
Sbjct: 271 SGGRPQRLXGDASGEPGSQVLPQDLA*RVLGD*VGEEDLVDPLVENNLLRDEFFDVILGD 450
Query: 1644 PGAAGRHDERHRDLAAGVIL 1585
A H+E RD A+ ++L
Sbjct: 451 FRAFDPHNEGDRDFASKIVL 510
Score = 46.0 bits (94), Expect(2) = 8e-028
Identities = 20/24 (83%), Positives = 20/24 (83%)
Frame = -2 / +3
Query: 1514 TWNPLYLMSSLSRSTMKISSPSST 1443
TW PLYLM SLS STMKISS SST
Sbjct: 582 TWKPLYLMISLSLSTMKISSSSST 653
Score = 41.4 bits (84), Expect(2) = 1e-004
Identities = 21/43 (48%), Positives = 25/43 (58%)
Frame = +3 / -3
Query: 1662 QAVRGETGGVLQEAAQDLLRGGHPQGAIRQDFKEGSESKAGVW 1790
Q +R E G LQE Q LL +PQ RQD +EG ES+A W
Sbjct: 433 QKIRREGGCFLQEDPQGLLHRLNPQEPFRQDPEEGLESQARRW 305
Score = 37.7 bits (76), Expect = 0.22
Identities = 16/35 (45%), Positives = 17/35 (48%)
Frame = -3 / +3
Query: 1798 WRIQTPALLSDPSLKSCRMAPWGWPPRRRSCAASC 1694
W Q A LS PS SC WG RR C +SC
Sbjct: 297 WGCQRRAWLSSPSSGSCLKGSWGLSR*RRPCGSSC 401
Score = 28.6 bits (56), Expect(2) = 1e-004
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +3 / -2
Query: 1479 AQGAHQVQGVPSRSGGA 1529
AQG HQVQG+P +G A
Sbjct: 617 AQGDHQVQGLPGGAGRA 567
Score = 26.3 bits (51), Expect(2) = 3e-012
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = -3 / +1
Query: 1534 PRAPPERLGTPCT**AP*A 1478
P A P G+PCT**+P*A
Sbjct: 562 PXALPAPPGSPCT**SP*A 618
>gb|BU986484.1|BU986484 HF12A02r HF Hordeum vulgare subsp. vulgare cDNA clone HF12A02
5-PRIME, mRNA sequence
Length = 577
Score = 192 bits (413), Expect = 7e-048
Identities = 76/141 (53%), Positives = 107/141 (75%)
Frame = +1 / +1
Query: 1348 GKQLMKGYLNNPEATAKTIDSEGWLHTGDIGYVDDGDEIFIVDRLKELIKYKGFQVAPAE 1527
G +MKGY+ + +ATA+T+DSEGWL TGD+ Y ++ ++IVDRLKELIKYKG+QV PAE
Sbjct: 10 GPLVMKGYVGDDKATAETVDSEGWLKTGDLCYFNEDGFLYIVDRLKELIKYKGYQVPPAE 189
Query: 1528 LEAMLIAHPSIVDAAVVQMKDDSCGEIPVAFVVASGGSGITEDEIKQYVAKQVVFYKRLH 1707
LE +L +HP I DAAV+ D+ G++P+AF+V GS +T ++ YVAK V YK++
Sbjct: 190 LEHILQSHPEIADAAVIGYPDEDVGQLPMAFIVRQPGSSLTGKQVMDYVAKHVAPYKKVR 369
Query: 1708 KIFFVEAIPKAPSGKILRKDL 1770
++ FV AIPK+P+GKILR++L
Sbjct: 370 RVAFVAAIPKSPAGKILRREL 432
Score = 88.6 bits (187), Expect = 1e-016
Identities = 57/147 (38%), Positives = 67/147 (45%)
Frame = -2 / -3
Query: 1787 DASFALRSFLKILPDGALGMASTKKILCSLL*NTTCFATYCLISSSVIPEPPDATTNATG 1608
D + S KI P G LG+A+TK + L* TC AT + V EP T A G
Sbjct: 449 DMACCTSSRRKIFPAGDLGIAATKATRRTFL*GATCLAT*SMTCFPVRLEPGCLTIKAIG 270
Query: 1607 ISPQESSFIWTTAASTMLGWXXXXXXXXXXATWNPLYLMSSLSRSTMKISSPSSTYPMSP 1428
P SS TAAS + G TW PLY ++S RSTM + S SP
Sbjct: 269 SCPTSSSGYPITAASAISGCDCRICSSSAGGTWYPLYFINSFKRSTM*RNPSSLK*QRSP 90
Query: 1427 VCSHPSESMVFAVASGLLRYPFINCLP 1347
V S PSES V AVA PF+ P
Sbjct: 89 VFSQPSESTVSAVALSSPT*PFMTSGP 9
>gb|CA007491.1|CA007491 HU08C03r HU Hordeum vulgare subsp. vulgare cDNA clone HU08C03
5-PRIME, mRNA sequence
Length = 581
Score = 164 bits (352), Expect(2) = 2e-047
Identities = 64/125 (51%), Positives = 86/125 (68%)
Frame = +1 / +1
Query: 1246 GACGTVVRNAELKIIDPETGLSLHRNQPGEICIRGKQLMKGYLNNPEATAKTIDSEGWLH 1425
G G + N E KI+ PETG +L N+ GE+ IRG +MKGY N EAT T+ +GWL
Sbjct: 205 GTAGLLSPNTEAKIVPPETGEALPVNRTGELWIRGPYVMKGYFKNTEATQSTVTPDGWLK 384
Query: 1426 TGDIGYVDDGDEIFIVDRLKELIKYKGFQVAPAELEAMLIAHPSIVDAAVVQMKDDSCGE 1605
TGD+ Y+D+ +F+VDRLKELIKYKG+Q+ PAELEA+L+ HP + D AV+ D G+
Sbjct: 385 TGDLCYIDEDGYLFVVDRLKELIKYKGYQLPPAELEALLLTHPEVSDVAVIPFPDREVGQ 564
Query: 1606 IPVAF 1620
P+A+
Sbjct: 565 FPMAY 579
Score = 79.0 bits (166), Expect(2) = 4e-018
Identities = 50/126 (39%), Positives = 57/126 (45%)
Frame = -2 / -1
Query: 1622 TNATGISPQESSFIWTTAASTMLGWXXXXXXXXXXATWNPLYLMSSLSRSTMKISSPSST 1443
T A G P S TA S GW + PLYL++S RST K SS
Sbjct: 581 T*AIGN*PTSLSGNGITATSETSGWVSRRASNSAGGS**PLYLINSFRRSTTKRYPSSSM 402
Query: 1442 YPMSPVCSHPSESMVFAVASGLLRYPFINCLPLMQISPGWLRWRDSPVSGSMIFSSAFLT 1263
SPV SHPS V VAS L+YPF+ PL+Q SP SPVSG I +S
Sbjct: 401 *HRSPVLSHPSGVTVDCVASVFLKYPFMT*GPLIQSSPVRFTGSASPVSGGTILASVLGD 222
Query: 1262 TVPQAP 1245
P P
Sbjct: 221 RSPAVP 204
Score = 46.9 bits (96), Expect(2) = 2e-047
Identities = 19/40 (47%), Positives = 28/40 (70%)
Frame = +1 / +1
Query: 1069 LSSVRMVISGAAPMGKELQDLLRAKLPRAVLGQGYGMTEA 1188
L ++R V+SG AP+ KEL + R K P+ + QGYG+TE+
Sbjct: 37 LGNLRKVLSGGAPLSKELIEGFRDKYPQVEILQGYGLTES 156
Score = 41.8 bits (85), Expect(2) = 0.009
Identities = 22/55 (40%), Positives = 31/55 (56%)
Frame = -1 / -3
Query: 1434 VSGVQPPLRVDGLRRCLRVVEVPFHQLLAPDANLPGLVAVEGQPGLRVDDL*LGI 1270
V+G++P + CL V+EV FH + +PD L G V + LR DDL LG+
Sbjct: 393 VTGLEPSVGRHRRLCCLCVLEVSFHDVGSPDPELAGAVHRQRLACLRGDDLGLGV 229
Score = 34.5 bits (69), Expect(2) = 1.1
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = +3 / +3
Query: 1275 RAKDHRPGDRAVPPPQPARGDLHQGQAVDERVPQQPGGNGED 1400
R +D PGDR +P R L QG ER+ Q+ GN D
Sbjct: 234 RGQDRPPGDRRGAAGEPHRRALDQGTLRHERILQEHRGNTVD 359
Score = 33.6 bits (67), Expect(2) = 4e-018
Identities = 17/35 (48%), Positives = 20/35 (57%)
Frame = -2 / -1
Query: 1184 SVIP*PCPSTARGSLARSRSCSSLPMGAAPEMTMR 1080
SV P PC + G L+ S SSL GA PE T+R
Sbjct: 152 SVSPYPCRISTCGYLSLKPSMSSLLSGAPPESTLR 48
Score = 21.7 bits (41), Expect(2) = 0.009
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -1 / -1
Query: 996 AVPLHQLEHAESVEA 952
AVP +L AESV+A
Sbjct: 212 AVPYRRLSSAESVDA 168
Score = 21.7 bits (41), Expect(2) = 1.1
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = +2 / +2
Query: 1190 ARCSRCAWRLPRSRYR*SPVPAARW 1264
ARCS A R RS + S RW
Sbjct: 50 ARCSPAARR*ARSSSKASGTSTRRW 124
>gb|BE195071.1|BE195071 HVSMEh0088D12f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0088D12f, mRNA sequence
Length = 639
Score = 99.6 bits (211), Expect(3) = 4e-046
Identities = 38/50 (76%), Positives = 47/50 (94%)
Frame = +1 / +3
Query: 730 LPYSSGTTGLPKGVMLSHRGLVTSVAQLVDGDNPNLHFREDDVVLCVLPM 879
LPYSSGTTGL KGVML+HR L+TSVAQ VDG+NPNL+FR++DV+LC+LP+
Sbjct: 366 LPYSSGTTGLAKGVMLTHRSLITSVAQQVDGENPNLYFRKEDVLLCLLPL 515
Score = 79.0 bits (166), Expect(3) = 4e-046
Identities = 34/60 (56%), Positives = 43/60 (71%)
Frame = +1 / +3
Query: 379 LGVRSGGTVMLLLPNSVEFALAFLACSRLGAAATTANPLHTPPEIAKQAAASGATVVITE 558
+GV G VM LL N EFA +FL +RLGAA TTANP +TP EI +QA A+GA +++TE
Sbjct: 21 MGVGKGDVVMNLLRNCPEFAFSFLGAARLGAATTTANPFYTPHEIHRQADAAGAMLIVTE 200
Score = 78.0 bits (164), Expect(2) = 2e-024
Identities = 34/67 (50%), Positives = 41/67 (61%)
Frame = -2 / -3
Query: 932 APARIPHSRMECSEYTWNMGSTQRTTSSSRKWRFGLSPSTSCATLVTSPRCDSITPLGSP 753
+P P + + GS +TSS K+RFG SPST CATLV RC S+TPL SP
Sbjct: 568 SPGAQPRQQHRVERVDVDSGSRHSSTSSFLKYRFGFSPSTCCATLVMRLRCVSMTPLASP 389
Query: 752 VVPDEYG 732
VVP+EYG
Sbjct: 388 VVPEEYG 368
Score = 59.3 bits (123), Expect(2) = 2e-024
Identities = 30/59 (50%), Positives = 35/59 (59%)
Frame = -2 / -3
Query: 557 SVMTTVAPEAAACLAISGGVWSGLAVVAAAPRREHARNASANSTEFGRSSITVPPLRTP 381
SV ++AP A+AC IS GV GLAVV AAPRR R ANS + +T PL TP
Sbjct: 199 SVTMSMAPAASACRWISCGV*KGLAVVVAAPRRAAPRKEKANSGQLRSRFMTTSPLPTP 23
Score = 52.4 bits (108), Expect(3) = 4e-046
Identities = 22/39 (56%), Positives = 29/39 (74%)
Frame = +1 / +2
Query: 883 HVYSLHSILLCGMRAGAALVIMKRFDTLRMFELVKRHGI 999
H+YSL+S+LL G+RA AA VIM++FD + EL R GI
Sbjct: 518 HIYSLNSVLLAGLRARAAKVIMRKFDICALVELGPRTGI 634
>gb|BE411374.1|BE411374 ISC004.H10F990609 ITEC ISC Barley Leaf Library Hordeum vulgare subsp.
vulgare cDNA clone ISC004.H10, mRNA sequence
Length = 492
Score = 116 bits (249), Expect(3) = 6e-045
Identities = 47/61 (77%), Positives = 53/61 (86%)
Frame = +1 / +1
Query: 1066 DLSSVRMVISGAAPMGKELQDLLRAKLPRAVLGQGYGMTEAGPVLSMCMAFAKEPLPVKS 1245
DL+S+RMV+SGAAPMGK+LQD AK+P AVLGQGYGMTEAGPVLSMC+AFAKEP K
Sbjct: 169 DLASIRMVMSGAAPMGKDLQDAFMAKIPNAVLGQGYGMTEAGPVLSMCLAFAKEPFAXKX 348
Query: 1246 G 1248
G
Sbjct: 349 G 351
Score = 98.7 bits (209), Expect(3) = 1e-030
Identities = 42/63 (66%), Positives = 47/63 (74%)
Frame = -2 / -2
Query: 1253 QAPDFTGNGSLANAMHIESTGPASVIP*PCPSTARGSLARSRSCSSLPMGAAPEMTMRTD 1074
+ P NGSLANA H++STGPASVIP PCPSTA G LA S SLPMGAAP+MTMR +
Sbjct: 356 RTPXLXANGSLANARHMDSTGPASVIPYPCPSTALGILAMKASWRSLPMGAAPDMTMRME 177
Query: 1073 ERS 1065
RS
Sbjct: 176 ARS 168
Score = 76.7 bits (161), Expect(3) = 1e-023
Identities = 32/55 (58%), Positives = 39/55 (70%)
Frame = -1 / -1
Query: 1230 RLLGKRHAHREHRACLCHPITLSEHGARELGAQQVLQLLAHGRGPRDDHAHRREV 1066
RLLG+R AH +HR L HP+ LSEHG +LG + VL++LAHGRG DHA EV
Sbjct: 333 RLLGERQAHGQHRPGLRHPVPLSEHGVGDLGHEGVLEVLAHGRGAGHDHADGGEV 169
Score = 75.8 bits (159), Expect = 8e-013
Identities = 30/49 (61%), Positives = 32/49 (65%)
Frame = +2 / +2
Query: 1085 WSSRGPRPWARSCRTCCAPSSLAPCSDRVMG*QRQARCSRCAWRLPRSR 1231
WS PRPWAR+ RT P S PCSDR G*+R RC CAWR PRSR
Sbjct: 188 WSCPAPRPWARTSRTPSWPRSPTPCSDRGTG*RRPGRCCPCAWRSPRSR 334
Score = 63.8 bits (133), Expect(3) = 6e-045
Identities = 25/48 (52%), Positives = 35/48 (72%)
Frame = +1 / +2
Query: 901 SILLCGMRAGAALVIMKRFDTLRMFELVKRHGITIVPLVLPIAVEMVK 1044
S+LL G+RAG A+VIM++FD + LV+ HG+T+ P V PI VE+ K
Sbjct: 2 SVLLAGLRAGCAIVIMRKFDHGVLVRLVRAHGVTVAPFVPPIVVEIAK 145
Score = 45.1 bits (92), Expect(3) = 1e-030
Identities = 20/46 (43%), Positives = 22/46 (47%)
Frame = -1 / -3
Query: 1044 LDHLHRDGQHERHDRDAVPLHQLEHAESVEALHDHERRAGAHPAQQ 907
L L DG+HE D V HQ VE HDH+R G P QQ
Sbjct: 145 LGDLDDDGRHEGRHGDPVRAHQAHQHAVVELAHDHDRAPGPQPRQQ 8
Score = 43.2 bits (88), Expect(3) = 1e-023
Identities = 23/48 (47%), Positives = 23/48 (47%)
Frame = -2 / -1
Query: 1043 LTISTAMGSTSGTIVMPCLFTSSNMRRVSKRFMITSAAPARIPHSRME 900
L IST MG T G V PC T S MIT A PAR P S E
Sbjct: 144 LAISTTMGGTKGATVTPCARTRRTSTPWSNLRMITIAHPARSPASSTE 1
Score = 40.0 bits (81), Expect(3) = 6e-045
Identities = 14/21 (66%), Positives = 17/21 (80%)
Frame = +1 / +2
Query: 1234 PVKSGACGTVVRNAELKIIDP 1296
P + G+CGTVVRN ELKI+ P
Sbjct: 338 PXRXGSCGTVVRNVELKIVXP 400
Score = 35.0 bits (70), Expect = 1.5
Identities = 14/23 (60%), Positives = 15/23 (65%)
Frame = -3 / -3
Query: 1231 TAPWQTPCTSRAPGLPLSSHNPV 1163
TAPW+TP T AP P SS PV
Sbjct: 334 TAPWRTPGTWTAPARPPSSRTPV 266
Score = 29.0 bits (57), Expect(3) = 1e-030
Identities = 14/27 (51%), Positives = 14/27 (51%)
Frame = -2 / -1
Query: 1313 RDSPVSGSMIFSSAFLTTVPQAPDFTG 1233
R S G I SS F TTVPQ P G
Sbjct: 417 RGSXGVGXTIXSSTFRTTVPQDPXLXG 337
Score = 28.6 bits (56), Expect(3) = 1e-023
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -1 / -3
Query: 1296 RVDDL*LGIPHHRAAG 1249
R DL L +PHHRAAG
Sbjct: 400 RXXDLXLHVPHHRAAG 353
>gb|BE411643.1|BE411643 ISC007.G04F990714 ITEC ISC Barley Leaf Library Hordeum vulgare subsp.
vulgare cDNA clone ISC007.G04, mRNA sequence
Length = 494
Score = 171 bits (367), Expect(2) = 1e-043
Identities = 69/108 (63%), Positives = 87/108 (80%)
Frame = +1 / +2
Query: 901 SILLCGMRAGAALVIMKRFDTLRMFELVKRHGITIVPLVLPIAVEMVKSDAIDRHDLSSV 1080
S+LL G+RAG A+VIM++FD + LV+ HG+T+ P V PI VE+ KSD + DL+S+
Sbjct: 2 SVLLAGLRAGCAIVIMRKFDHGLLVRLVRAHGVTVAPFVPPIVVEIAKSDRVTAADLASI 181
Query: 1081 RMVISGAAPMGKELQDLLRAKLPRAVLGQGYGMTEAGPVLSMCMAFAK 1224
RMV+SGAAPMGK+LQD AK+P AVLGQGYGMTEAGPVLSMC+AFA+
Sbjct: 182 RMVMSGAAPMGKDLQDAFMAKIPNAVLGQGYGMTEAGPVLSMCLAFAR 325
Score = 129 bits (277), Expect(2) = 6e-030
Identities = 63/108 (58%), Positives = 68/108 (62%)
Frame = -2 / -3
Query: 1223 LANAMHIESTGPASVIP*PCPSTARGSLARSRSCSSLPMGAAPEMTMRTDERSWRSMASL 1044
LANA H++STGPASVIP PCPSTA G LA S SLPMGAAP+MTMR + RS SL
Sbjct: 324 LANARHMDSTGPASVIPYPCPSTALGILAMKASWRSLPMGAAPDMTMRMEARSAAVTRSL 145
Query: 1043 LTISTAMGSTSGTIVMPCLFTSSNMRRVSKRFMITSAAPARIPHSRME 900
L IST MG T G V PC T + S MIT A PAR P S E
Sbjct: 144 LAISTTMGGTKGATVTPCARTRRTSKPWSNLRMITIAHPARSPASSTE 1
Score = 110 bits (234), Expect = 4e-023
Identities = 50/104 (48%), Positives = 59/104 (56%)
Frame = -1 / -2
Query: 1218 KRHAHREHRACLCHPITLSEHGARELGAQQVLQLLAHGRGPRDDHAHRREVVAVDGVALD 1039
+R AH +HR L HP+ LSEHG +LG + VL++LAHGRG DHA EV VAL
Sbjct: 319 ERQAHGQHRPGLRHPVPLSEHGVGDLGHEGVLEVLAHGRGAGHDHADGGEVGGGHPVALG 140
Query: 1038 HLHRDGQHERHDRDAVPLHQLEHAESVEALHDHERRAGAHPAQQ 907
L DG+HE D V HQ VE HDH+R G P QQ
Sbjct: 139 DLDDDGRHEGRHGDPVRAHQAHQQAVVELAHDHDRAPGPQPRQQ 8
Score = 67.0 bits (140), Expect = 3e-010
Identities = 26/44 (59%), Positives = 28/44 (63%)
Frame = +2 / +3
Query: 1085 WSSRGPRPWARSCRTCCAPSSLAPCSDRVMG*QRQARCSRCAWR 1216
WS PRPWAR+ RT P S PCSDR G*+R RC CAWR
Sbjct: 186 WSCPAPRPWARTSRTPSWPRSPTPCSDRGTG*RRPGRCCPCAWR 317
Score = 27.2 bits (53), Expect(2) = 1e-043
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +1 / +3
Query: 1237 VKSGACGTVVR 1269
VKSG+CGTVVR
Sbjct: 336 VKSGSCGTVVR 368
Score = 22.6 bits (43), Expect(2) = 6e-030
Identities = 9/20 (45%), Positives = 9/20 (45%)
Frame = -2 / -2
Query: 1265 TTVPQAPDFTGNGSLANAMH 1206
TTVPQ PD T H
Sbjct: 364 TTVPQDPDLTRTAPCERQAH 305
>gb|BM816676.1|BM816676 HB01C09_T3.ab1 HB Hordeum vulgare subsp. vulgare cDNA clone
HB01C09_T3.ab1 similar to Renilla-luciferin
2-monooxygenase,4-coumarate--CoA ligase, mRNA sequence
Length = 865
Score = 104 bits (222), Expect(4) = 8e-041
Identities = 42/118 (35%), Positives = 73/118 (61%)
Frame = +1 / +1
Query: 853 DVVLCVLPMFHVYSLHSILLCGMRAGAALVIMKRFDTLRMFELVKRHGITIVPLVLPIAV 1032
+V LC LPMFH++ L I ++ G A+V+M F + V++H +T V V P+ +
Sbjct: 70 NVFLCFLPMFHIFGLSVITFAQLQRGNAVVVMSGFAMDSVMRAVQQHRVTHVFCVPPVMI 249
Query: 1033 EMVKSDAIDRHDLSSVRMVISGAAPMGKELQDLLRAKLPRAVLGQGYGMTEAGPVLSM 1206
+ K + ++DLSS++ + SGAAP+G+++ +++ P A + QGYGMTE ++S+
Sbjct: 250 ALAKHGRVGKYDLSSLKFIGSGAAPLGRDVMEVVAKNFPDAEIVQGYGMTETCGIISL 423
Score = 59.3 bits (123), Expect(4) = 8e-041
Identities = 27/53 (50%), Positives = 34/53 (64%)
Frame = +1 / +1
Query: 1246 GACGTVVRNAELKIIDPETGLSLHRNQPGEICIRGKQLMKGYLNNPEATAKTI 1404
G+ GT+V E K+ID ET L +Q GEICIR +M+GY NN +AT TI
Sbjct: 457 GSTGTLVVGVEAKVIDVETQKHLPPSQLGEICIRRPHIMQGYFNNVKATEITI 615
Score = 53.3 bits (110), Expect(3) = 1e-016
Identities = 31/86 (36%), Positives = 42/86 (48%)
Frame = -2 / -3
Query: 1184 SVIP*PCPSTARGSLARSRSCSSLPMGAAPEMTMRTDERSWRSMASLLTISTAMGSTSGT 1005
SVIP*P +A G + S +SLP GAAPE ++ RS+ L + G T T
Sbjct: 401 SVIP*P*TISASGKFLATTSMTSLPSGAAPEPMNLSELRSYLPTRPCLASAIITGGTQKT 222
Query: 1004 IVMPCLFTSSNMRRVSKRFMITSAAP 927
V C T+ ++K M T+A P
Sbjct: 221 CVTRCCCTALITESMAKPDMTTTALP 144
Score = 51.5 bits (106), Expect(2) = 9e-006
Identities = 33/105 (31%), Positives = 41/105 (39%)
Frame = -1 / -2
Query: 1185 LCHPITLSEHGARELGAQQVLQLLAHGRGPRDDHAHRREVVAVDGVALDHLHRDGQHERH 1006
L H I L++ G E+ + + A RG D R EVV D L +H
Sbjct: 402 LSHTIALNDLGVGEVLGHHLHDVPAERRGAGADELERAEVVLADPPVLGERDHHRRHAED 223
Query: 1005 DRDAVPLHQLEHAESVEALHDHERRAGAHPAQQDGVQRVHVEHGQ 871
R V LH H EA HD A + D + VEHGQ
Sbjct: 222 VRHPVLLHGPHHRVHGEARHDDHGVAALQLREGDDGEAEDVEHGQ 88
Score = 41.8 bits (85), Expect(3) = 1e-016
Identities = 24/54 (44%), Positives = 32/54 (59%)
Frame = -2 / -3
Query: 1403 MVFAVASGLLRYPFINCLPLMQISPGWLRWRDSPVSGSMIFSSAFLTTVPQAPD 1242
+V +VA LL+YP I C +QISP L R VS S+ F+S T+VP P+
Sbjct: 614 IVISVAFTLLKYPCIMCGLRIQISPS*LGGRCFCVSTSITFASTPTTSVPVDPN 453
Score = 36.3 bits (73), Expect(4) = 8e-041
Identities = 14/34 (41%), Positives = 23/34 (67%)
Frame = +1 / +3
Query: 1438 GYVDDGDEIFIVDRLKELIKYKGFQVAPAELEAM 1539
GY D+ ++F+V LK+ + KGFQ+ A+LE +
Sbjct: 648 GYFDEKRQLFVVH*LKD*LSPKGFQIGLADLEGL 749
Score = 29.5 bits (58), Expect(3) = 1e-016
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -2 / -2
Query: 1508 NPLYLMSSLSRSTMKISSPSSTYPMSPVCSHP 1413
NPL L+S L K + + SPVC+HP
Sbjct: 717 NPLDLISLLVNGRQKAAFFHQSIQRSPVCTHP 622
Score = 24.4 bits (47), Expect(4) = 8e-041
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = +1 / +2
Query: 1396 KTIDSEGWLHTGDI 1437
K +GW+HTGD+
Sbjct: 605 KLQSGKGWVHTGDL 646
Score = 23.1 bits (44), Expect(2) = 9e-006
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = -2 / -1
Query: 1511 WNPLYLMSSLSRSTMKISSPSSTYP 1437
W P L S S+ T K SS YP
Sbjct: 721 WKPFGLNQSFSQWTTKSCLFSSKYP 647
>gb|BG418054.1|BG418054 HVSMEk0021B11f Hordeum vulgare testa/pericarp EST library HVcDNA0013
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEk0021B11f, mRNA sequence
Length = 491
Score = 166 bits (358), Expect = 3e-040
Identities = 67/132 (50%), Positives = 95/132 (71%)
Frame = +1 / +1
Query: 1255 GTVVRNAELKIIDPETGLSLHRNQPGEICIRGKQLMKGYLNNPEATAKTIDSEGWLHTGD 1434
G + + + KI+DP TG +L Q GE+ I+G +MKGY+ + +ATA+T+DSEGWL TGD
Sbjct: 88 GKLASHLQAKIVDPSTGEALWPGQRGELLIKGPLVMKGYVGDDKATAETVDSEGWLKTGD 267
Query: 1435 IGYVDDGDEIFIVDRLKELIKYKGFQVAPAELEAMLIAHPSIVDAAVVQMKDDSCGEIPV 1614
+ Y ++ ++IVDRLKELIKYKG+Q PAELE +L +HP I DAAV+ D+ G++P+
Sbjct: 268 LCYFNEDGFLYIVDRLKELIKYKGYQGPPAELEHILQSHPEIADAAVIGYPDEDVGQLPM 447
Query: 1615 AFVVASGGSGIT 1650
AF+V GS +T
Sbjct: 448 AFIVRQPGSSLT 483
Score = 83.1 bits (175), Expect = 5e-015
Identities = 50/129 (38%), Positives = 60/129 (46%)
Frame = -2 / -1
Query: 1640 EPPDATTNATGISPQESSFIWTTAASTMLGWXXXXXXXXXXATWNPLYLMSSLSRSTMKI 1461
EP T A G P SS TAAS + G W PLY ++S RSTM
Sbjct: 473 EPGCLTIKAIGSCPTSSSGYPITAASAISGCDCRICSSSAGGPWYPLYFINSFKRSTM*R 294
Query: 1460 SSPSSTYPMSPVCSHPSESMVFAVASGLLRYPFINCLPLMQISPGWLRWRDSPVSGSMIF 1281
+ S SPV S PSES V AVA PF+ PL++ SP W SPV GS IF
Sbjct: 293 NPSSLK*QRSPVLSQPSESTVSAVALSSPT*PFMTSGPLIKSSPRWPGQSASPVDGSTIF 114
Query: 1280 SSAFLTTVP 1254
+ ++P
Sbjct: 113 ACKCDASLP 87
>gb|AV833853.1|AV833853 AV833853 K. Sato unpublished cDNA library: Hordeum vulgare subsp.
vulgare shoots germination Hordeum vulgare subsp. vulgare
cDNA clone bags8m01, mRNA sequence
Length = 599
Score = 134 bits (287), Expect(2) = 2e-039
Identities = 54/78 (69%), Positives = 68/78 (87%)
Frame = +1 / +3
Query: 1558 IVDAAVVQMKDDSCGEIPVAFVVASGGSGITEDEIKQYVAKQVVFYKRLHKIFFVEAIPK 1737
I DAAVV +KDD GE+P+AFV+ GS ITED+IK++VAK+VVFYKR+HK+FF ++IPK
Sbjct: 168 IKDAAVVSLKDDLAGEVPIAFVMRIEGSEITEDDIKKFVAKEVVFYKRIHKVFFTDSIPK 347
Query: 1738 APSGKILRKDLRAKLASG 1791
PSGKILRKDLRA+LA+G
Sbjct: 348 NPSGKILRKDLRARLAAG 401
Score = 92.3 bits (195), Expect(2) = 2e-022
Identities = 47/76 (61%), Positives = 52/76 (68%)
Frame = -2 / -2
Query: 1790 PDASFALRSFLKILPDGALGMASTKKILCSLL*NTTCFATYCLISSSVIPEPPDATTNAT 1611
P AS AL+SFL+ILP+G LG+ S KK L LL* TT FAT L+SSSVI EP T A
Sbjct: 400 PAASLALKSFLRILPEGFLGIESVKKTLWILL*KTTSFATNFLMSSSVISEPSIRITKAI 221
Query: 1610 GISPQESSFIWTTAAS 1563
G SP SSF TTAAS
Sbjct: 220 GTSPARSSFSDTTAAS 173
Score = 66.6 bits (139), Expect(2) = 2e-011
Identities = 34/80 (42%), Positives = 49/80 (61%)
Frame = -1 / -1
Query: 1824 SGASTR*PVGESRRQLCSQILP*NLAGWRLGDGLHEEDLVQPLVEHHLFRHVLLDLVLGD 1645
SG + G++ + SQ+LP +LA LGD + EEDLV PLVE++L R D++LGD
Sbjct: 434 SGGRPQRLAGDASGEPGSQVLPQDLA*RVLGD*VGEEDLVDPLVENNLLRDEFFDVILGD 255
Query: 1644 PGAAGRHDERHRDLAAGVIL 1585
A H+E RD A+ ++L
Sbjct: 254 FRAFDPHNEGDRDFASKIVL 195
Score = 49.6 bits (102), Expect(2) = 2e-039
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = +1 / +1
Query: 1462 IFIVDRLKELIKYKGFQVAPA 1524
IFIVDRLKE+IKYKGFQVAPA
Sbjct: 70 IFIVDRLKEIIKYKGFQVAPA 132
Score = 41.4 bits (84), Expect(2) = 2e-004
Identities = 21/43 (48%), Positives = 25/43 (58%)
Frame = +3 / +2
Query: 1662 QAVRGETGGVLQEAAQDLLRGGHPQGAIRQDFKEGSESKAGVW 1790
Q +R E G LQE Q LL +PQ RQD +EG ES+A W
Sbjct: 272 QKIRREGGCFLQEDPQGLLHRLNPQEPFRQDPEEGLESQARRW 400
Score = 37.7 bits (76), Expect = 0.22
Identities = 16/35 (45%), Positives = 17/35 (48%)
Frame = -3 / -3
Query: 1798 WRIQTPALLSDPSLKSCRMAPWGWPPRRRSCAASC 1694
W Q A LS PS SC WG RR C +SC
Sbjct: 408 WGCQRRAWLSSPSSGSCLKGSWGLSR*RRPCGSSC 304
Score = 35.0 bits (70), Expect(2) = 2e-022
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = -2 / -1
Query: 1514 TWNPLYLMSSLSRSTMK 1464
TW PLYLM SLS STMK
Sbjct: 122 TWKPLYLMISLSLSTMK 72
Score = 27.6 bits (54), Expect(2) = 2e-004
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +3 / +3
Query: 1479 AQGAHQVQGVPSRSG 1523
AQG HQVQG+P +G
Sbjct: 87 AQGDHQVQGLPGGAG 131
Score = 23.1 bits (44), Expect(2) = 2e-011
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = -3 / -2
Query: 1522 PERLGTPCT**AP*A 1478
P G+PCT**+P*A
Sbjct: 130 PAPPGSPCT**SP*A 86
>gb|BF623616.2|BF623616 HVSMEa0003A08f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0003A08f, mRNA sequence
Length = 484
Score = 90.4 bits (191), Expect(2) = 9e-035
Identities = 40/65 (61%), Positives = 44/65 (67%)
Frame = +1 / +1
Query: 178 QAETTVFRSTLPDIAIPDHLPLHDYVLERLAERRDRACLIDGATGETLTFGDVDRLSRRV 357
+A TVFRS LPDI IP HL L DY ERL E R CLIDG TG T+ DV +LSRR
Sbjct: 106 EAPETVFRSRLPDIEIPAHLTLQDYCFERLPEVAARPCLIDGQTGAVHTYADVSQLSRRC 285
Query: 358 AAGMR 372
AAG+R
Sbjct: 286 AAGLR 300
Score = 78.0 bits (164), Expect(2) = 9e-035
Identities = 34/60 (56%), Positives = 42/60 (70%)
Frame = +1 / +1
Query: 379 LGVRSGGTVMLLLPNSVEFALAFLACSRLGAAATTANPLHTPPEIAKQAAASGATVVITE 558
LG+ G VM LL N EFA FL +RLGAA TTANP TP EI +QA+A+GA +++TE
Sbjct: 304 LGIGKGDVVMNLLRNCPEFAFVFLGAARLGAATTTANPFCTPHEIHRQASAAGARLIVTE 483
Score = 50.1 bits (103), Expect(2) = 9e-006
Identities = 30/69 (43%), Positives = 34/69 (49%)
Frame = -2 / -3
Query: 557 SVMTTVAPEAAACLAISGGVWSGLAVVAAAPRREHARNASANSTEFGRSSITVPPLRTPR 378
SV + AP A A IS GV +GLAVV AAP R RN ANS + +T P P
Sbjct: 482 SVTISRAPAALAWRWISCGVQNGLAVVVAAPSRAAPRNTKANSGQLRSRFMTTSPFPMPS 303
Query: 377 QARIPAATR 351
R A R
Sbjct: 302 LRRPAAHRR 276
Score = 23.5 bits (45), Expect(2) = 9e-006
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = -2 / -3
Query: 221 AMSGSVERNTVVSA 180
+MSGS++RNTV A
Sbjct: 149 SMSGSLDRNTVSGA 108
>gb|AW983524.1|AW983524 HVSMEg0010P03f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0010P03f, mRNA sequence
Length = 856
Score = 64.3 bits (134), Expect(4) = 2e-034
Identities = 28/57 (49%), Positives = 36/57 (63%)
Frame = +1 / +3
Query: 1372 LNNPEATAKTIDSEGWLHTGDIGYVDDGDEIFIVDRLKELIKYKGFQVAPAELEAML 1542
L T +I S GW+ DIGY+D+ ++FI R+KELI KGFQV+PAE A L
Sbjct: 528 LGTKRKTEPSIYSHGWVDNRDIGYIDEQGDVFIRHRIKELI*SKGFQVSPAEF*AFL 698
Score = 56.5 bits (117), Expect(4) = 2e-034
Identities = 23/75 (30%), Positives = 38/75 (50%)
Frame = +1 / +3
Query: 862 LCVLPMFHVYSLHSILLCGMRAGAALVIMKRFDTLRMFELVKRHGITIVPLVLPIAVEMV 1041
L ++P FH+Y + I +R +V+M RFD + H + P+V P+ + MV
Sbjct: 6 LGLMPFFHIYGITGICCATLRHKGTVVVMDRFDLRTFLGALVAHRVMFAPVVPPVMLAMV 185
Query: 1042 KSDAIDRHDLSSVRM 1086
K+ D DLS + +
Sbjct: 186 KNPIADEFDLSGLAL 230
Score = 51.5 bits (106), Expect(4) = 2e-034
Identities = 20/45 (44%), Positives = 29/45 (64%)
Frame = +1 / +3
Query: 1240 KSGACGTVVRNAELKIIDPETGLSLHRNQPGEICIRGKQLMKGYL 1374
K + G ++ N E+K +DP+TG SL +N PGE+C R + M G L
Sbjct: 393 KKNSVGFILPNLEVKFVDPDTGRSLSKNTPGELCRRSQCGMHGLL 527
Score = 35.4 bits (71), Expect(3) = 1e-005
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = -3 / -2
Query: 1534 PRAPPERLGTPCT**AP*AGXXXXXXXXXXRTQCLRCAATPPSRWSSP 1391
P+ P E+ TP T *AP +G +QC C T SRW +P
Sbjct: 690 PKIPQEKPETPWTK*APLSGGE*KHPLVRQYSQCPCCQPTRGSRWRAP 547
Score = 30.4 bits (60), Expect(4) = 2e-034
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = +1 / +3
Query: 1075 SVRMVISGAAPMGKELQDLLRAKLPRAVLGQGYGMTE 1185
+++ V++ AAP+ +L + K P + + YG+TE
Sbjct: 225 ALKSVMTAAAPLAPDLLAAFQRKFPGVQVEEAYGLTE 335
Score = 29.9 bits (59), Expect(3) = 1e-005
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -1 / -3
Query: 1368 PFHQLLAPDANLPGLVAVEGQPGLRVDDL*LGI 1270
P H LAP LP V +G PG+ V +L L +
Sbjct: 521 PMHPALAPTTQLPRGVF*QGPPGVGVHELHLQV 423
Score = 29.9 bits (59), Expect(2) = 0.20
Identities = 18/38 (47%), Positives = 22/38 (57%)
Frame = -2 / -1
Query: 1514 TWNPLYLMSSLSRSTMKISSPSSTYPMSPVCSHPSESM 1401
T NPL +SS R +K S SS PMS + +HP E M
Sbjct: 670 T*NPLD*ISSFIRWRIKTSPCSSI*PMSLLSTHPWE*M 557
Score = 28.1 bits (55), Expect(3) = 1e-005
Identities = 17/64 (26%), Positives = 22/64 (34%)
Frame = -1 / -3
Query: 1071 EVVAVDGVALDHLHRDGQHERHDRDAVPLHQLEHAESVEALHDHERRAGAHPAQQDGVQR 892
EV V LDH +H + V + + VE +H H R D
Sbjct: 215 EVELVGDGVLDHGQHHRRHHGREHHPVRNQRAQERPQVEPVHHHHRALVPQSRAADAGDA 36
Query: 891 VHVE 880
V VE
Sbjct: 35 VDVE 24
Score = 25.4 bits (49), Expect(2) = 0.20
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = -2 / -1
Query: 1334 SPGWLRWRDSPVSGSMIFSS 1275
SPG RD PVSGS F+S
Sbjct: 487 SPGVFFDRDRPVSGSTNFTS 428
>gb|AL502418.1|AL502418 AL502418 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW07I12u 3', mRNA sequence
Length = 592
Score = 103 bits (220), Expect(2) = 4e-029
Identities = 38/79 (48%), Positives = 61/79 (77%)
Frame = +1 / -1
Query: 1552 PSIVDAAVVQMKDDSCGEIPVAFVVASGGSGITEDEIKQYVAKQVVFYKRLHKIFFVEAI 1731
P I+DA V+ DD GE+P+A+VV S S +TE ++++++AKQV +YKRL ++ FVE++
Sbjct: 520 PEILDAVVIPFPDDEAGEVPIAYVVRSPASSLTEVDVQKFIAKQVTYYKRLRRVTFVESV 341
Query: 1732 PKAPSGKILRKDLRAKLAS 1788
PK+ +GKILR++L A++ S
Sbjct: 340 PKSAAGKILRRELIAQVRS 284
Score = 55.1 bits (114), Expect = 1e-006
Identities = 35/79 (44%), Positives = 39/79 (49%)
Frame = -2 / +3
Query: 1787 DASFALRSFLKILPDGALGMASTKKILCSLL*NTTCFATYCLISSSVIPEPPDATTNATG 1608
D + A+ S LKILP G STK SLL* TC A S+SV D TT A G
Sbjct: 285 DLTCAMSSLLKILPAADFGTLSTKVTRLSLL*YVTCLAINFWTSTSVNELAGDLTT*AIG 464
Query: 1607 ISPQESSFIWTTAASTMLG 1551
SP SS T AS + G
Sbjct: 465 TSPASSSGNGITTASRISG 521
Score = 46.0 bits (94), Expect(2) = 4e-029
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = +1 / -3
Query: 1483 KELIKYKGFQVAPAELEAMLIAHP 1554
KELIK KGFQ+APAE E +L++HP
Sbjct: 590 KELIKSKGFQIAPAEXEGLLLSHP 519
>gb|CA025271.1|CA025271 HZ51K14r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ51K14
5-PRIME, mRNA sequence
Length = 642
Score = 61.1 bits (127), Expect(3) = 2e-022
Identities = 24/63 (38%), Positives = 37/63 (58%)
Frame = +1 / +3
Query: 853 DVVLCVLPMFHVYSLHSILLCGMRAGAALVIMKRFDTLRMFELVKRHGITIVPLVLPIAV 1032
+ LC +PMFHVY L + + GA +V++ +F+ M + +G+T +PLV PI V
Sbjct: 264 ETFLCTVPMFHVYGLVAFATGLLGCGATIVVLSKFELPEMLRCITAYGVTYLPLVPPILV 443
Query: 1033 EMV 1041
MV
Sbjct: 444 AMV 452
Score = 46.9 bits (96), Expect(3) = 2e-022
Identities = 19/40 (47%), Positives = 28/40 (70%)
Frame = +1 / +3
Query: 1069 LSSVRMVISGAAPMGKELQDLLRAKLPRAVLGQGYGMTEA 1188
L ++R V+SG AP+ KEL + R K P+ + QGYG+TE+
Sbjct: 474 LGNLRKVLSGGAPLSKELIEGFRDKYPQVEILQGYGLTES 593
Score = 38.6 bits (78), Expect(4) = 6e-012
Identities = 20/56 (35%), Positives = 26/56 (46%)
Frame = -1 / -2
Query: 1041 DHLHRDGQHERHDRDAVPLHQLEHAESVEALHDHERRAGAHPAQQDGVQRVHVEHG 874
DH DG+HER D V +H +E + A A A +G + V VEHG
Sbjct: 452 DHGDEDGRHERQVGDPVGGDAAQHLGELELGEHDDGGAAAEQAGGEGDEAVDVEHG 285
Score = 36.8 bits (74), Expect(3) = 2e-022
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = +1 / +3
Query: 730 LPYSSGTTGLPKGVMLSHRGLVTSV 804
L YSSGTTG KGV+ +HR L++ V
Sbjct: 144 LLYSSGTTGPSKGVVATHRNLISMV 218
Score = 33.6 bits (67), Expect(4) = 6e-012
Identities = 17/35 (48%), Positives = 20/35 (57%)
Frame = -2 / -3
Query: 1184 SVIP*PCPSTARGSLARSRSCSSLPMGAAPEMTMR 1080
SV P PC + G L+ S SSL GA PE T+R
Sbjct: 589 SVSPYPCRISTCGYLSLKPSMSSLLSGAPPESTLR 485
Score = 26.7 bits (52), Expect(4) = 6e-012
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -2 / -3
Query: 785 RCDSITPLGSPVVPDE 738
RC + TPL PVVP+E
Sbjct: 199 RCVATTPLLGPVVPEE 152
Score = 25.8 bits (50), Expect(4) = 6e-012
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -1 / -2
Query: 669 IVGGGSEVGERDAALC 622
+VGGG + E DAA C
Sbjct: 50 VVGGGGRLEEHDAASC 3
>gb|CA023903.1|CA023903 HZ47M06r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ47M06
5-PRIME, mRNA sequence
Length = 370
Score = 78.0 bits (164), Expect(2) = 8e-022
Identities = 34/60 (56%), Positives = 42/60 (70%)
Frame = +1 / +1
Query: 379 LGVRSGGTVMLLLPNSVEFALAFLACSRLGAAATTANPLHTPPEIAKQAAASGATVVITE 558
LG+ G VM LL N EFA FL +RLGAA TTANP TP EI +QA+A+GA +++TE
Sbjct: 106 LGIGKGDVVMNLLRNCPEFAFVFLGAARLGAATTTANPFCTPHEIHRQASAAGARLIVTE 285
Score = 50.1 bits (103), Expect = 4e-005
Identities = 30/69 (43%), Positives = 34/69 (49%)
Frame = -2 / -3
Query: 557 SVMTTVAPEAAACLAISGGVWSGLAVVAAAPRREHARNASANSTEFGRSSITVPPLRTPR 378
SV + AP A A IS GV +GLAVV AAP R RN ANS + +T P P
Sbjct: 284 SVTISRAPAALAWRWISCGVQNGLAVVVAAPSRAAPRNTKANSGQLRSRFMTTSPFPMPS 105
Query: 377 QARIPAATR 351
R A R
Sbjct: 104 LRRPAAHRR 78
Score = 46.9 bits (96), Expect(2) = 8e-022
Identities = 19/30 (63%), Positives = 22/30 (73%)
Frame = +1 / +1
Query: 283 RACLIDGATGETLTFGDVDRLSRRVAAGMR 372
R CLIDG TG T+ DV +LSRR AAG+R
Sbjct: 13 RPCLIDGQTGAVHTYADVSQLSRRCAAGLR 102
>gb|BQ757736.1|BQ757736 EBem10_SQ005_B05_R embryo, 2 Day germination, no treatment, cv Optic,
EBem10 Hordeum vulgare subsp. vulgare cDNA clone
EBem10_SQ005_B05 5', mRNA sequence
Length = 338
Score = 101 bits (215), Expect = 1e-020
Identities = 42/69 (60%), Positives = 53/69 (76%)
Frame = +1 / +2
Query: 1564 DAAVVQMKDDSCGEIPVAFVVASGGSGITEDEIKQYVAKQVVFYKRLHKIFFVEAIPKAP 1743
+AAVV DD GE+PVAFVV GS + E +IK +VAKQVV YKR+H++F V++IPK
Sbjct: 2 EAAVVGYADDQAGELPVAFVVQRSGSKVHEAQIKDFVAKQVVHYKRIHRVFLVDSIPKNA 181
Query: 1744 SGKILRKDL 1770
+GKILRKDL
Sbjct: 182 AGKILRKDL 208
Score = 66.1 bits (138), Expect = 6e-010
Identities = 37/69 (53%), Positives = 40/69 (57%)
Frame = -2 / -3
Query: 1769 RSFLKILPDGALGMASTKKILCSLL*NTTCFATYCLISSSVIPEPPDATTNATGISPQES 1590
+S KILP GM ST+K C L* TTC AT LI +S P TTNATG SP S
Sbjct: 207 KSLRKILPAAFFGMESTRKTRCIRL*CTTCLATKSLIWASCTLLPERCTTNATGNSPA*S 28
Query: 1589 SFIWTTAAS 1563
S TTAAS
Sbjct: 27 SAYPTTAAS 1
Score = 38.6 bits (78), Expect = 0.12
Identities = 21/62 (33%), Positives = 33/62 (53%)
Frame = -1 / -2
Query: 1773 SQILP*NLAGWRLGDGLHEEDLVQPLVEHHLFRHVLLDLVLGDPGAAGRHDERHRDLAAG 1594
SQ+L +LA G+H+E+ V L+ H LF + DL L + +DE +R L +
Sbjct: 211 SQVLAQDLARGIFRYGIHKENTVYSLIVHDLFSDEVFDLGLMHFASGALYDECYRQLTSL 32
Query: 1593 VI 1588
+I
Sbjct: 31 II 26
>gb|BF621660.1|BF621660 HVSMEa0011M07f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0011M07f, mRNA sequence
Length = 838
Score = 80.3 bits (169), Expect(2) = 3e-020
Identities = 33/62 (53%), Positives = 40/62 (64%)
Frame = +1 / +1
Query: 184 ETTVFRSTLPDIAIPDHLPLHDYVLERLAERRDRACLIDGATGETLTFGDVDRLSRRVAA 363
E T+FRS LPDI IP+HLPLH+Y + AE D CLI ATG T TF + L R+ AA
Sbjct: 166 EETIFRSKLPDIDIPNHLPLHEYCFAKAAEVPDAPCLIAAATGRTYTFAETHALCRKAAA 345
Query: 364 GM 369
+
Sbjct: 346 AL 351
Score = 40.9 bits (83), Expect = 0.024
Identities = 20/55 (36%), Positives = 29/55 (52%)
Frame = -2 / -3
Query: 512 ISGGVWSGLAVVAAAPRREHARNASANSTEFGRSSITVPPLRTPRQARIPAATRR 348
+S V SGL+ V R+ + +ANST+F +T P TPR+ AA R+
Sbjct: 491 VSSAVQSGLSAVLMDSRKNAPKKVTANSTQFCSRIMTRSPWPTPRRCSAAAALRQ 327
Score = 39.1 bits (79), Expect(2) = 3e-020
Identities = 23/53 (43%), Positives = 26/53 (49%)
Frame = +1 / +1
Query: 352 RVAAGMRACLGVRSGGTVMLLLPNSVEFALAFLACSRLGAAATTANPLHTPPE 510
R AA LGV G VM+LL N VEFA+ F L + T NP T E
Sbjct: 331 RKAAAALHRLGVGHGDRVMILLQNCVEFAVTFFGAFFLESINTADNPDCTAEE 489
>gb|BQ663192.1|BQ663192 HU01C23w HU Hordeum vulgare subsp. vulgare cDNA clone HU01C23
3-PRIME, mRNA sequence
Length = 631
Score = 73.5 bits (154), Expect(3) = 6e-020
Identities = 29/83 (34%), Positives = 50/83 (60%)
Frame = +1 / -2
Query: 1408 SEGWLHTGDIGYVDDGDEIFIVDRLKELIKYKGFQVAPAELEAMLIAHPSIVDAAVVQMK 1587
+ GW H+GD+G I + DR+K++I G ++ E+E ++ HP++++A+VV
Sbjct: 537 AHGWYHSGDLGVKHPDGYIEVKDRMKDIIISGGENISTLEVEKVVYMHPAVLEASVVARA 358
Query: 1588 DDSCGEIPVAFVVASGGSGITED 1656
DD GE P AFV G+G +++
Sbjct: 357 DDRWGESPCAFVTLKEGAGGSDE 289
Score = 41.8 bits (85), Expect(2) = 6e-007
Identities = 26/87 (29%), Positives = 34/87 (39%)
Frame = -2 / +2
Query: 1673 TYCLISSSVIPEPPDATTNATGISPQESSFIWTTAASTMLGWXXXXXXXXXXATWNPLYL 1494
++ +SS P P TNA G SP SS + TT AS G ++P +
Sbjct: 272 SFASATSSEPPAPSLRVTNAQGDSPHRSSALATTEASRTAGCMYTTFSTSRVLMFSPPEM 451
Query: 1493 MSSLSRSTMKISSPSSTYPMSPVCSHP 1413
M S RS + P SP P
Sbjct: 452 MMSFIRSLTSMYPSGCFTPRSPEWYQP 532
Score = 37.7 bits (76), Expect(3) = 6e-020
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = +1 / -2
Query: 1330 GEICIRGKQLMKGYLNNPEATAK 1398
GEI +RG +MKGYL NP+A A+
Sbjct: 612 GEIVMRGNAVMKGYLKNPKANAE 544
Score = 34.1 bits (68), Expect = 2.8
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +3 / -1
Query: 1320 QPARGDLHQGQAVDERVPQQPGG 1388
Q RGD H+GQ DE +P++P G
Sbjct: 622 QVLRGDRHEGQRCDEGLPEEPQG 554
Score = 32.7 bits (65), Expect(2) = 6e-007
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = -2 / +2
Query: 1394 AVASGLLRYPFINCLPLMQISP 1329
A+A G R PFI LPLM ISP
Sbjct: 548 ALALGFFR*PFITALPLMTISP 613
Score = 24.9 bits (48), Expect(3) = 6e-020
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +1 / -2
Query: 1729 IPKAPSGKILRKDLRAK 1779
+PK +GKI + +LRAK
Sbjct: 204 LPKTATGKIKKHELRAK 154
>gb|BQ464737.1|BQ464737 HU01C23T HU Hordeum vulgare subsp. vulgare cDNA clone HU01C23
5-PRIME, mRNA sequence
Length = 611
Score = 73.5 bits (154), Expect(3) = 6e-020
Identities = 29/83 (34%), Positives = 50/83 (60%)
Frame = +1 / +2
Query: 1408 SEGWLHTGDIGYVDDGDEIFIVDRLKELIKYKGFQVAPAELEAMLIAHPSIVDAAVVQMK 1587
+ GW H+GD+G I + DR+K++I G ++ E+E ++ HP++++A+VV
Sbjct: 152 AHGWYHSGDLGVKHPDGYIEVKDRMKDIIISGGENISTLEVEKVVYMHPAVLEASVVARA 331
Query: 1588 DDSCGEIPVAFVVASGGSGITED 1656
DD GE P AFV G+G +++
Sbjct: 332 DDRWGESPCAFVTLKEGAGGSDE 400
Score = 41.8 bits (85), Expect(2) = 6e-007
Identities = 26/87 (29%), Positives = 34/87 (39%)
Frame = -2 / -3
Query: 1673 TYCLISSSVIPEPPDATTNATGISPQESSFIWTTAASTMLGWXXXXXXXXXXATWNPLYL 1494
++ +SS P P TNA G SP SS + TT AS G ++P +
Sbjct: 417 SFASATSSEPPAPSLRVTNAQGDSPHRSSALATTEASRTAGCMYTTFSTSRVLMFSPPEM 238
Query: 1493 MSSLSRSTMKISSPSSTYPMSPVCSHP 1413
M S RS + P SP P
Sbjct: 237 MMSFIRSLTSMYPSGCFTPRSPEWYQP 157
Score = 37.7 bits (76), Expect(3) = 6e-020
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = +1 / +2
Query: 1330 GEICIRGKQLMKGYLNNPEATAK 1398
GEI +RG +MKGYL NP+A A+
Sbjct: 77 GEIVMRGNAVMKGYLKNPKANAE 145
Score = 34.1 bits (68), Expect = 2.8
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +3 / +1
Query: 1320 QPARGDLHQGQAVDERVPQQPGG 1388
Q RGD H+GQ DE +P++P G
Sbjct: 67 QVLRGDRHEGQRCDEGLPEEPQG 135
Score = 32.7 bits (65), Expect(2) = 6e-007
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = -2 / -3
Query: 1394 AVASGLLRYPFINCLPLMQISP 1329
A+A G R PFI LPLM ISP
Sbjct: 141 ALALGFFR*PFITALPLMTISP 76
Score = 24.9 bits (48), Expect(3) = 6e-020
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +1 / +2
Query: 1729 IPKAPSGKILRKDLRAK 1779
+PK +GKI + +LRAK
Sbjct: 485 LPKTATGKIKKHELRAK 535
>gb|BU996800.1|BU996800 HM14M21r HM Hordeum vulgare subsp. vulgare cDNA clone HM14M21
5-PRIME, mRNA sequence
Length = 546
Score = 73.5 bits (154), Expect(3) = 6e-020
Identities = 29/83 (34%), Positives = 50/83 (60%)
Frame = +1 / +1
Query: 1408 SEGWLHTGDIGYVDDGDEIFIVDRLKELIKYKGFQVAPAELEAMLIAHPSIVDAAVVQMK 1587
+ GW H+GD+G I + DR+K++I G ++ E+E ++ HP++++A+VV
Sbjct: 142 AHGWYHSGDLGVKHPDGYIEVKDRMKDIIISGGENISTLEVEKVVYMHPAVLEASVVARA 321
Query: 1588 DDSCGEIPVAFVVASGGSGITED 1656
DD GE P AFV G+G +++
Sbjct: 322 DDRWGESPCAFVTLKEGAGGSDE 390
Score = 41.8 bits (85), Expect(2) = 6e-007
Identities = 26/87 (29%), Positives = 34/87 (39%)
Frame = -2 / -2
Query: 1673 TYCLISSSVIPEPPDATTNATGISPQESSFIWTTAASTMLGWXXXXXXXXXXATWNPLYL 1494
++ +SS P P TNA G SP SS + TT AS G ++P +
Sbjct: 407 SFASATSSEPPAPSLRVTNAQGDSPHRSSALATTEASRTAGCMYTTFSTSRVLMFSPPEM 228
Query: 1493 MSSLSRSTMKISSPSSTYPMSPVCSHP 1413
M S RS + P SP P
Sbjct: 227 MMSFIRSLTSMYPSGCFTPRSPEWYQP 147
Score = 37.7 bits (76), Expect(3) = 6e-020
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = +1 / +1
Query: 1330 GEICIRGKQLMKGYLNNPEATAK 1398
GEI +RG +MKGYL NP+A A+
Sbjct: 67 GEIVMRGNAVMKGYLKNPKANAE 135
Score = 34.1 bits (68), Expect = 2.8
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +3 / +3
Query: 1320 QPARGDLHQGQAVDERVPQQPGG 1388
Q RGD H+GQ DE +P++P G
Sbjct: 57 QVLRGDRHEGQRCDEGLPEEPQG 125
Score = 32.7 bits (65), Expect(2) = 6e-007
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = -2 / -2
Query: 1394 AVASGLLRYPFINCLPLMQISP 1329
A+A G R PFI LPLM ISP
Sbjct: 131 ALALGFFR*PFITALPLMTISP 66
Score = 24.9 bits (48), Expect(3) = 6e-020
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +1 / +1
Query: 1729 IPKAPSGKILRKDLRAK 1779
+PK +GKI + +LRAK
Sbjct: 475 LPKTATGKIKKHELRAK 525
>gb|BI956206.1|BI956206 HVSMEn0001B17f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0001B17f, mRNA sequence
Length = 1132
Score = 90.0 bits (190), Expect(2) = 3e-019
Identities = 40/65 (61%), Positives = 43/65 (66%)
Frame = +1 / +2
Query: 178 QAETTVFRSTLPDIAIPDHLPLHDYVLERLAERRDRACLIDGATGETLTFGDVDRLSRRV 357
+A TVFRS LPDI IP HL L DY ERL E R CLIDG TG T+ DV LSRR
Sbjct: 119 EAPXTVFRSRLPDIEIPAHLTLQDYCFERLPEVAARPCLIDGQTGAVHTYADVSXLSRRC 298
Query: 358 AAGMR 372
AAG+R
Sbjct: 299 AAGLR 313
Score = 30.9 bits (61), Expect(2) = 3e-019
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +3 / +2
Query: 1341 HQGQAVDERVPQQPGGNGEDHRLGG 1415
H G A +R P++PGG G D R G
Sbjct: 821 HAGDARRDRGPRRPGGRGRDGRRPG 895
>gb|BF620533.2|BF620533 HVSMEc0020C18f Hordeum vulgare seedling shoot EST library HVcDNA0003
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEc0020C18f, mRNA sequence
Length = 674
Score = 76.7 bits (161), Expect(2) = 3e-018
Identities = 32/88 (36%), Positives = 53/88 (60%)
Frame = +1 / +3
Query: 853 DVVLCVLPMFHVYSLHSILLCGMRAGAALVIMKRFDTLRMFELVKRHGITIVPLVLPIAV 1032
+V LC LPMFH++ L I ++ G A+V+M F + V++H +T V V P+ +
Sbjct: 411 NVFLCFLPMFHIFGLSVITFAQLQRGNAVVVMSGFAMDSVMRAVQQHRVTHVFCVPPVMI 590
Query: 1033 EMVKSDAIDRHDLSSVRMVISGAAPMGK 1116
+ K + ++DLSS++ + S AAP+GK
Sbjct: 591 ALAKHGRVGKYDLSSLKFIGSRAAPLGK 674
Score = 44.1 bits (90), Expect(2) = 4e-006
Identities = 28/82 (34%), Positives = 31/82 (37%)
Frame = -1 / -1
Query: 1116 LAHGRGPRDDHAHRREVVAVDGVALDHLHRDGQHERHDRDAVPLHQLEHAESVEALHDHE 937
LA RG D R EVV D L +H R V LH H EA HD
Sbjct: 674 LAERRGAGADELERAEVVLADPPVLGERDHHRRHAEDVRHPVLLHGPHHRVHGEARHDDH 495
Query: 936 RRAGAHPAQQDGVQRVHVEHGQ 871
A + D + VEHGQ
Sbjct: 494 GVAALQLREGDDGEAEDVEHGQ 429
Score = 36.3 bits (73), Expect(2) = 3e-018
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +1 / +3
Query: 730 LPYSSGTTGLPKGVMLSHRGLVTSVAQL 813
L YSSGTTG KGV+L+HR + + +
Sbjct: 294 LLYSSGTTGESKGVVLTHRNFIAAATMV 377
Score = 27.6 bits (54), Expect(2) = 4e-006
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -2 / -2
Query: 785 RCDSITPLGSPVVPDE 738
RC TPL SPVVP+E
Sbjct: 349 RCVRTTPLLSPVVPEE 302
>gb|BJ477300.1|BJ477300 BJ477300 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal16n22 3', mRNA sequence
Length = 733
Score = 66.1 bits (138), Expect(3) = 3e-018
Identities = 27/75 (36%), Positives = 42/75 (56%)
Frame = +1 / -2
Query: 1414 GWLHTGDIGYVDDGDEIFIVDRLKELIKYKGFQVAPAELEAMLIAHPSIVDAAVVQMKDD 1593
GW H+GD+G I + DR K++I G ++ E+E + HP++++A+VV D+
Sbjct: 531 GWFHSGDLGVRHPDGYIEVKDRAKDIIISGGENISSLEVEKAVYMHPAVLEASVVARADE 352
Query: 1594 SCGEIPVAFVVASGG 1638
GE P AFV G
Sbjct: 351 QWGESPCAFVTLKDG 307
Score = 39.1 bits (79), Expect(3) = 3e-018
Identities = 14/27 (51%), Positives = 20/27 (74%)
Frame = +1 / -2
Query: 1330 GEICIRGKQLMKGYLNNPEATAKTIDS 1410
GEI +RG +MKGYL NP+A A+ ++
Sbjct: 612 GEIVMRGNAVMKGYLKNPKANAEAFEN 532
Score = 24.9 bits (48), Expect(3) = 3e-018
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +1 / -2
Query: 1729 IPKAPSGKILRKDLRAK 1779
+PK +GKI + +LRAK
Sbjct: 204 LPKTATGKIKKHELRAK 154
>gb|CV059902.1|CV059902 BNEL52b8 Barley EST endosperm library Hordeum vulgare subsp. vulgare
cDNA clone BNEL52b8 5' similar to Putative AMP-binding
protein, mRNA sequence
Length = 548
Score = 92.7 bits (196), Expect = 6e-018
Identities = 37/78 (47%), Positives = 52/78 (66%)
Frame = +1 / +1
Query: 1537 MLIAHPSIVDAAVVQMKDDSCGEIPVAFVVASGGSGITEDEIKQYVAKQVVFYKRLHKIF 1716
+L+ HP + D AV+ D G+ P+A+VV GS ++ E+ ++VAKQV YK++ K+
Sbjct: 1 LLLTHPEVSDVAVIPFPDREVGQFPMAYVVRKKGSNLSAQEVMEFVAKQVAPYKKVRKVA 180
Query: 1717 FVEAIPKAPSGKILRKDL 1770
FV IPK SGKILRKDL
Sbjct: 181 FVTDIPKNASGKILRKDL 234
Score = 56.5 bits (117), Expect = 5e-007
Identities = 33/80 (41%), Positives = 39/80 (48%)
Frame = -2 / -1
Query: 1787 DASFALRSFLKILPDGALGMASTKKILCSLL*NTTCFATYCLISSSVIPEPPDATTNATG 1608
D + +RSFL ILPD LGM+ T + L* TCFAT + S + P TT A G
Sbjct: 251 DVASLIRSFLSILPDAFLGMSVTNATFLTFL*GATCFATNSITSCADKLLPFFLTT*AIG 72
Query: 1607 ISPQESSFIWTTAASTMLGW 1548
P S TA S GW
Sbjct: 71 N*PTSLSGNGITATSETSGW 12
Score = 39.1 bits (79), Expect = 0.086
Identities = 17/34 (50%), Positives = 21/34 (61%)
Frame = +3 / +3
Query: 1668 VRGETGGVLQEAAQDLLRGGHPQGAIRQDFKEGS 1769
V GETG LQE + +R HPQ + QD +EGS
Sbjct: 132 VCGETGSTLQEGEEGGVRDRHPQECVWQDTEEGS 233
Score = 35.0 bits (70), Expect = 1.5
Identities = 22/60 (36%), Positives = 30/60 (50%)
Frame = -1 / -3
Query: 1833 RKNSGASTR*PVGESRRQLCSQILP*NLAGWRLGDGLHEEDLVQPLVEHHLFRHVLLDLV 1654
R N+ + + + R+ +ILP LA LGD HE L LV +LFRH L L+
Sbjct: 297 RDNTQSRITVHISQLGRRELDKILPQYLARRILGDVCHERHLPHLLVRCYLFRHKLHHLL 118
>gb|CV061694.1|CV061694 BNEL70h10 Barley EST endosperm library Hordeum vulgare subsp. vulgare
cDNA clone BNEL70h10 5' similar to Putative AMP-binding
protein, mRNA sequence
Length = 568
Score = 92.7 bits (196), Expect = 6e-018
Identities = 37/78 (47%), Positives = 52/78 (66%)
Frame = +1 / +1
Query: 1537 MLIAHPSIVDAAVVQMKDDSCGEIPVAFVVASGGSGITEDEIKQYVAKQVVFYKRLHKIF 1716
+L+ HP + D AV+ D G+ P+A+VV GS ++ E+ ++VAKQV YK++ K+
Sbjct: 1 LLLTHPEVSDVAVIPFPDREVGQFPMAYVVRKKGSNLSAQEVMEFVAKQVAPYKKVRKVA 180
Query: 1717 FVEAIPKAPSGKILRKDL 1770
FV IPK SGKILRKDL
Sbjct: 181 FVTDIPKNASGKILRKDL 234
Score = 56.5 bits (117), Expect = 5e-007
Identities = 33/80 (41%), Positives = 39/80 (48%)
Frame = -2 / -3
Query: 1787 DASFALRSFLKILPDGALGMASTKKILCSLL*NTTCFATYCLISSSVIPEPPDATTNATG 1608
D + +RSFL ILPD LGM+ T + L* TCFAT + S + P TT A G
Sbjct: 251 DVASLIRSFLSILPDAFLGMSVTNATFLTFL*GATCFATNSITSCADKLLPFFLTT*AIG 72
Query: 1607 ISPQESSFIWTTAASTMLGW 1548
P S TA S GW
Sbjct: 71 N*PTSLSGNGITATSETSGW 12
Score = 39.1 bits (79), Expect = 0.086
Identities = 17/34 (50%), Positives = 21/34 (61%)
Frame = +3 / +3
Query: 1668 VRGETGGVLQEAAQDLLRGGHPQGAIRQDFKEGS 1769
V GETG LQE + +R HPQ + QD +EGS
Sbjct: 132 VCGETGSTLQEGEEGGVRDRHPQECVWQDTEEGS 233
Score = 35.0 bits (70), Expect = 1.5
Identities = 22/60 (36%), Positives = 30/60 (50%)
Frame = -1 / -2
Query: 1833 RKNSGASTR*PVGESRRQLCSQILP*NLAGWRLGDGLHEEDLVQPLVEHHLFRHVLLDLV 1654
R N+ + + + R+ +ILP LA LGD HE L LV +LFRH L L+
Sbjct: 297 RDNTQSRITVHISQLGRRELDKILPQYLARRILGDVCHERHLPHLLVRCYLFRHKLHHLL 118
>gb|BQ766052.1|BQ766052 EBro03_SQ008_L23_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ008_L23 5', mRNA sequence
Length = 656
Score = 81.3 bits (171), Expect(2) = 2e-017
Identities = 35/104 (33%), Positives = 56/104 (53%)
Frame = +1 / +1
Query: 1414 GWLHTGDIGYVDDGDEIFIVDRLKELIKYKGFQVAPAELEAMLIAHPSIVDAAVVQMKDD 1593
GWL +GD+G + + DR K++I G ++ E+E+ L HP+++DAAVV DD
Sbjct: 208 GWLRSGDLGVRHPDGYVQLKDRSKDIIISGGENISSIEVESALFGHPAVLDAAVVARPDD 387
Query: 1594 SCGEIPVAFVVASGGSGITEDEIKQYVAKQVVFYKRLHKIFFVE 1725
GE P AFV G+ TE ++ ++ ++ Y + F E
Sbjct: 388 HWGETPCAFVTLKDGASATEADMIEFCRARLPRYMAPRTVLFAE 519
Score = 59.7 bits (124), Expect(3) = 1e-011
Identities = 32/84 (38%), Positives = 41/84 (48%)
Frame = -2 / -1
Query: 1664 LISSSVIPEPPDATTNATGISPQESSFIWTTAASTMLGWXXXXXXXXXXATWNPLYLMSS 1485
++S+SV P TNA G+SPQ SS + TTAAS+ GW ++P +M S
Sbjct: 458 IMSASVALAPSLRVTNAHGVSPQWSSGLATTAASSTAGWPNSADSTSMELMFSPPDMMMS 279
Query: 1484 LSRSTMKISSPSSTYPMSPVCSHP 1413
L RS P SP SHP
Sbjct: 278 LDRSLSWTYPSGCRTPRSPERSHP 207
Score = 29.0 bits (57), Expect(2) = 2e-017
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +1 / +1
Query: 1330 GEICIRGKQLMKGYLNNPEATAKTI 1404
GE+ +RG +M GY + ATA+ +
Sbjct: 127 GEVMLRGNTVMSGYYKDAAATAEAM 201
Score = 24.4 bits (47), Expect(3) = 1e-011
Identities = 7/15 (46%), Positives = 8/15 (53%)
Frame = -3 / -2
Query: 1738 PWGWPPRRRSCAASC 1694
PW WP +ASC
Sbjct: 583 PWPWPSHGADTSASC 539
Score = 23.5 bits (45), Expect(3) = 1e-011
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = -1 / -3
Query: 1416 PLRVDGLRRCLRVVEVPFHQLLAPDANLPGLVAVEG 1309
P + GLRR RV+ +P H + + +L V G
Sbjct: 213 PPALHGLRRRRRVLVIPAHHRVPSEHHLADGAPVGG 106
>gb|BF064640.2|BF064640 HV_CEb0016I15f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0016I15f, mRNA sequence
Length = 590
Score = 88.6 bits (187), Expect = 1e-016
Identities = 43/107 (40%), Positives = 60/107 (56%)
Frame = +1 / +2
Query: 235 LPLHDYVLERLAERRDRACLIDGATGETLTFGDVDRLSRRVAAGMRACLGVRSGGTVMLL 414
L + D +L R LID ATG L+F + A + + GVR G V+LL
Sbjct: 170 LSVADLLLRRADACPSAPALIDAATGRALSFAGLRSAVLTTAVALASRAGVRPGDAVLLL 349
Query: 415 LPNSVEFALAFLACSRLGAAATTANPLHTPPEIAKQAAASGATVVIT 555
PN V + + F A + +GA A+TANPL+TP EIAKQA+ + +V+T
Sbjct: 350 APNCVLYPVCFFAVTAVGAVASTANPLYTPREIAKQASDARVKLVVT 490
Score = 51.9 bits (107), Expect(2) = 2e-007
Identities = 26/62 (41%), Positives = 36/62 (58%)
Frame = -2 / -3
Query: 566 NAGSVMTTVAPEAAACLAISGGVWSGLAVVAAAPRREHARNASANSTEFGRSSITVPPLR 387
++ +V T++ + ACLAIS GV SGLAV+A AP A+ + T+ G T P R
Sbjct: 501 SSATVTTSLTRASDACLAISRGV*SGLAVLATAPTAVTAKKQTG*RTQLGARRSTASPGR 322
Query: 386 TP 381
TP
Sbjct: 321 TP 316
Score = 24.4 bits (47), Expect(2) = 2e-007
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -1 / -2
Query: 345 QAVHVAEGERFARGAVDE 292
+ EGER ARG VD+
Sbjct: 280 RGAEAGEGERAARGGVDQ 227
>gb|CA009125.1|CA009125 HU13D23r HU Hordeum vulgare subsp. vulgare cDNA clone HU13D23
5-PRIME, mRNA sequence
Length = 555
Score = 75.3 bits (158), Expect(2) = 2e-016
Identities = 30/84 (35%), Positives = 48/84 (57%)
Frame = +1 / +3
Query: 1408 SEGWLHTGDIGYVDDGDEIFIVDRLKELIKYKGFQVAPAELEAMLIAHPSIVDAAVVQMK 1587
+ GW HTGDIG +D + +V R+KELI G +++P E++++L+ HP + A +
Sbjct: 15 AHGWFHTGDIGVMDGEGYVRLVGRIKELINRGGEKISPIEVDSVLLGHPDVAQAVSFGVP 194
Query: 1588 DDSCGEIPVAFVVASGGSGITEDE 1659
DD GE V+ GG+ + E
Sbjct: 195 DDKYGEEIHCAVIPRGGAAVALGE 266
Score = 43.2 bits (88), Expect = 0.005
Identities = 28/82 (34%), Positives = 31/82 (37%)
Frame = -2 / -3
Query: 1658 SSSVIPEPPDATTNATGISPQESSFIWTTAASTMLGWXXXXXXXXXXATWNPLYLMSSLS 1479
S S PP T SP SS A GW ++P LMSSL
Sbjct: 265 SPSATAAPPLGITAQWISSPYLSSGTPNDTACATSGWPSSTESTSMGEIFSPPRLMSSLI 86
Query: 1478 RSTMKISSPSSTYPMSPVCSHP 1413
R T S PMSPV +HP
Sbjct: 85 RPTSLTYPSPSITPMSPVWNHP 20
Score = 31.8 bits (63), Expect(2) = 2e-016
Identities = 11/38 (28%), Positives = 22/38 (57%)
Frame = +1 / +3
Query: 1651 EDEIKQYVAKQVVFYKRLHKIFFVEAIPKAPSGKILRK 1764
E+E+ + K + +K K++ + +PK +GKI R+
Sbjct: 264 EEEVVAFCRKNLAAFKVPKKVYIADDLPKTATGKIQRR 377
>gb|BF256299.3|BF256299 HVSMEf0009M24f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEf0009M24f, mRNA sequence
Length = 770
Score = 67.5 bits (141), Expect(2) = 2e-016
Identities = 28/77 (36%), Positives = 43/77 (55%)
Frame = +1 / +1
Query: 1414 GWLHTGDIGYVDDGDEIFIVDRLKELIKYKGFQVAPAELEAMLIAHPSIVDAAVVQMKDD 1593
GW H+GD+G I + DR K++I G ++ E+E + HP++++A+VV D+
Sbjct: 394 GWFHSGDLGVRHPDGYIEVKDRAKDIIISGGENISNLEVEKAVYMHPAVLEASVVARADE 573
Query: 1594 SCGEIPVAFVVASGGSG 1644
GE P AFV G G
Sbjct: 574 QWGESPCAFVTPQGRRG 624
Score = 39.1 bits (79), Expect(2) = 2e-016
Identities = 14/27 (51%), Positives = 20/27 (74%)
Frame = +1 / +1
Query: 1330 GEICIRGKQLMKGYLNNPEATAKTIDS 1410
GEI +RG +MKGYL NP+A A+ ++
Sbjct: 313 GEIVMRGNAVMKGYLKNPKANAEAFEN 393
>gb|CA028867.1|CA028867 HZ63H16r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ63H16
5-PRIME, mRNA sequence
Length = 391
Score = 67.5 bits (141), Expect(2) = 1e-015
Identities = 28/82 (34%), Positives = 48/82 (58%)
Frame = +1 / +1
Query: 853 DVVLCVLPMFHVYSLHSILLCGMRAGAALVIMKRFDTLRMFELVKRHGITIVPLVLPIAV 1032
+V LC LPMFH++ L I ++ G A+V+M F + V++H +T V V P+ +
Sbjct: 145 NVFLCFLPMFHIFGLSVITFAQLQRGNAVVVMSGFAMDSVMRAVQQHRVTHVFCVPPVMI 324
Query: 1033 EMVKSDAIDRHDLSSVRMVISG 1098
+ K + ++DLSS++ + SG
Sbjct: 325 ALAKHGRVGKYDLSSLKFIGSG 390
Score = 38.6 bits (78), Expect(2) = 1e-004
Identities = 24/73 (32%), Positives = 27/73 (36%)
Frame = -1 / -2
Query: 1089 DHAHRREVVAVDGVALDHLHRDGQHERHDRDAVPLHQLEHAESVEALHDHERRAGAHPAQ 910
D R EVV D L +H R V LH H EA HD A +
Sbjct: 381 DELERAEVVLADPPVLGERDHHRRHAEDVRHPVLLHGPHHRVHGEARHDDHGVAALQLRE 202
Query: 909 QDGVQRVHVEHGQ 871
D + VEHGQ
Sbjct: 201 GDDGEAEDVEHGQ 163
Score = 36.3 bits (73), Expect(2) = 1e-015
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +1 / +1
Query: 730 LPYSSGTTGLPKGVMLSHRGLVTSVAQL 813
L YSSGTTG KGV+L+HR + + +
Sbjct: 28 LLYSSGTTGESKGVVLTHRNFIAAATMV 111
Score = 27.6 bits (54), Expect(2) = 1e-004
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -2 / -3
Query: 785 RCDSITPLGSPVVPDE 738
RC TPL SPVVP+E
Sbjct: 83 RCVRTTPLLSPVVPEE 36
>gb|CA005904.1|CA005904 HU08C03u HU Hordeum vulgare subsp. vulgare cDNA clone HU08C03
3-PRIME, mRNA sequence
Length = 484
Score = 82.2 bits (173), Expect = 9e-015
Identities = 34/71 (47%), Positives = 47/71 (66%)
Frame = +1 / -1
Query: 1558 IVDAAVVQMKDDSCGEIPVAFVVASGGSGITEDEIKQYVAKQVVFYKRLHKIFFVEAIPK 1737
+ D AV+ D G+ P+A+VV GS ++ E+ ++VAKQV YK++ K+ FV IPK
Sbjct: 484 VSDVAVIPFPDREVGQFPMAYVVRKKGSNLSAQEVMEFVAKQVAPYKKVRKVAFVTDIPK 305
Query: 1738 APSGKILRKDL 1770
SGKILRKDL
Sbjct: 304 NASGKILRKDL 272
Score = 48.7 bits (100), Expect = 1e-004
Identities = 30/70 (42%), Positives = 35/70 (50%)
Frame = -2 / +3
Query: 1772 LRSFLKILPDGALGMASTKKILCSLL*NTTCFATYCLISSSVIPEPPDATTNATGISPQE 1593
+RSFL ILPD LGM+ T + L* TCFAT + S + P TT A G P
Sbjct: 270 IRSFLSILPDAFLGMSVTNATFLTFL*GATCFATNSITSCADKLLPFFLTT*AIGN*PTS 449
Query: 1592 SSFIWTTAAS 1563
S TA S
Sbjct: 450 LSGNGITATS 479
Score = 39.1 bits (79), Expect = 0.086
Identities = 17/34 (50%), Positives = 21/34 (61%)
Frame = +3 / -3
Query: 1668 VRGETGGVLQEAAQDLLRGGHPQGAIRQDFKEGS 1769
V GETG LQE + +R HPQ + QD +EGS
Sbjct: 374 VCGETGSTLQEGEEGGVRDRHPQECVWQDTEEGS 273
Score = 33.1 bits (66), Expect = 5.3
Identities = 19/39 (48%), Positives = 22/39 (56%)
Frame = -1 / +2
Query: 1770 QILP*NLAGWRLGDGLHEEDLVQPLVEHHLFRHVLLDLV 1654
+ILP LA LGD HE L LV +LFRH L L+
Sbjct: 272 KILPQYLARRILGDVCHERHLPHLLVRCYLFRHKLHHLL 388
>gb|CA016130.1|CA016130 HV10D20u HV Hordeum vulgare subsp. vulgare cDNA clone HV10D20
3-PRIME, mRNA sequence
Length = 491
Score = 81.7 bits (172), Expect = 1e-014
Identities = 34/69 (49%), Positives = 46/69 (66%)
Frame = +1 / -3
Query: 1564 DAAVVQMKDDSCGEIPVAFVVASGGSGITEDEIKQYVAKQVVFYKRLHKIFFVEAIPKAP 1743
D AV+ D G+ P+A+VV GS ++ E+ ++VAKQV YK++ K+ FV IPK
Sbjct: 489 DVAVIPFPDREVGQFPMAYVVRKKGSNLSAQEVMEFVAKQVAPYKKVRKVAFVTDIPKNA 310
Query: 1744 SGKILRKDL 1770
SGKILRKDL
Sbjct: 309 SGKILRKDL 283
Score = 48.7 bits (100), Expect = 1e-004
Identities = 30/70 (42%), Positives = 35/70 (50%)
Frame = -2 / +2
Query: 1772 LRSFLKILPDGALGMASTKKILCSLL*NTTCFATYCLISSSVIPEPPDATTNATGISPQE 1593
+RSFL ILPD LGM+ T + L* TCFAT + S + P TT A G P
Sbjct: 281 IRSFLSILPDAFLGMSVTNATFLTFL*GATCFATNSITSCADKLLPFFLTT*AIGN*PTS 460
Query: 1592 SSFIWTTAAS 1563
S TA S
Sbjct: 461 LSGNGITATS 490
Score = 39.1 bits (79), Expect = 0.086
Identities = 17/34 (50%), Positives = 21/34 (61%)
Frame = +3 / -2
Query: 1668 VRGETGGVLQEAAQDLLRGGHPQGAIRQDFKEGS 1769
V GETG LQE + +R HPQ + QD +EGS
Sbjct: 385 VCGETGSTLQEGEEGGVRDRHPQECVWQDTEEGS 284
Score = 33.1 bits (66), Expect = 5.3
Identities = 19/39 (48%), Positives = 22/39 (56%)
Frame = -1 / +1
Query: 1770 QILP*NLAGWRLGDGLHEEDLVQPLVEHHLFRHVLLDLV 1654
+ILP LA LGD HE L LV +LFRH L L+
Sbjct: 283 KILPQYLARRILGDVCHERHLPHLLVRCYLFRHKLHHLL 399
>gb|BG365177.2|BG365177 HVSMEi0001K04f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0001K04f, mRNA sequence
Length = 801
Score = 57.4 bits (119), Expect(2) = 2e-013
Identities = 25/70 (35%), Positives = 38/70 (54%)
Frame = +1 / +2
Query: 1414 GWLHTGDIGYVDDGDEIFIVDRLKELIKYKGFQVAPAELEAMLIAHPSIVDAAVVQMKDD 1593
GW H+GD+G I + DR K++I G ++ E+E + HP+++ A+VV D
Sbjct: 326 GWFHSGDLGVRHPDGYIEVKDRAKDIIISGGENISSLEVEKAVYMHPAVLRASVVGRADK 505
Query: 1594 SCGEIPVAFV 1623
GE P FV
Sbjct: 506 Q*GESPCPFV 535
Score = 39.1 bits (79), Expect(2) = 2e-013
Identities = 14/27 (51%), Positives = 20/27 (74%)
Frame = +1 / +2
Query: 1330 GEICIRGKQLMKGYLNNPEATAKTIDS 1410
GEI +RG +MKGYL NP+A A+ ++
Sbjct: 245 GEIVMRGNAVMKGYLKNPKANAEAFEN 325
>gb|AL505142.1|AL505142 AL505142 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW07I12V 5', mRNA sequence
Length = 551
Score = 59.3 bits (123), Expect(2) = 5e-013
Identities = 25/77 (32%), Positives = 44/77 (57%)
Frame = +1 / +3
Query: 853 DVVLCVLPMFHVYSLHSILLCGMRAGAALVIMKRFDTLRMFELVKRHGITIVPLVLPIAV 1032
+V LC LPMFH++ L I ++ G A+V+M F + V++H +T V V + +
Sbjct: 321 NVFLCFLPMFHIFGLSVITFAQLQRGNAVVVMSGFAMDSVMRAVQQHRVTHVFCVPXVMI 500
Query: 1033 EMVKSDAIDRHDLSSVR 1083
+ K + ++DLSS++
Sbjct: 501 ALAKHGRVGKYDLSSLK 551
Score = 36.3 bits (73), Expect(2) = 7e-004
Identities = 23/69 (33%), Positives = 26/69 (37%)
Frame = -1 / -1
Query: 1077 RREVVAVDGVALDHLHRDGQHERHDRDAVPLHQLEHAESVEALHDHERRAGAHPAQQDGV 898
R EVV D L +H R V LH H EA HD A + D
Sbjct: 545 RAEVVLADPPVLGERDHHRRHAEDVRHPVLLHGPHHRVHGEARHDDHGVAALQLREGDDG 366
Query: 897 QRVHVEHGQ 871
+ VEHGQ
Sbjct: 365 EAEDVEHGQ 339
Score = 35.9 bits (72), Expect(2) = 5e-013
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = +1 / +3
Query: 730 LPYSSGTTGLPKGVMLSHRGLVTS 801
L YSSGTTG KGV+L+HR + +
Sbjct: 204 LLYSSGTTGESKGVVLTHRNFIAA 275
Score = 27.6 bits (54), Expect(2) = 7e-004
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -2 / -2
Query: 785 RCDSITPLGSPVVPDE 738
RC TPL SPVVP+E
Sbjct: 259 RCVRTTPLLSPVVPEE 212
>gb|CA018957.1|CA018957 HV10D20r HV Hordeum vulgare subsp. vulgare cDNA clone HV10D20
5-PRIME, mRNA sequence
Length = 485
Score = 64.3 bits (134), Expect(2) = 7e-013
Identities = 28/58 (48%), Positives = 36/58 (62%)
Frame = +1 / +1
Query: 382 GVRSGGTVMLLLPNSVEFALAFLACSRLGAAATTANPLHTPPEIAKQAAASGATVVIT 555
G+R G ++L PNSV F +A LA LGA TTANPL+T E+AKQ A + + T
Sbjct: 52 GLRKGHVALILSPNSVHFPVAALAAMSLGAVVTTANPLNTAAEVAKQVADARPVLAFT 225
Score = 45.1 bits (92), Expect(2) = 5e-004
Identities = 23/51 (45%), Positives = 26/51 (50%)
Frame = -2 / -1
Query: 530 AAACLAISGGVWSGLAVVAAAPRREHARNASANSTEFGRSSITVPPLRTPR 378
+A CLA S V SGLAVV AP A A+ TE G PLR P+
Sbjct: 200 SATCLATSAAVLSGLAVVTTAPSDMAASAATGKWTELGERMSATWPLRRPK 48
Score = 33.6 bits (67), Expect(2) = 7e-013
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = +1 / +1
Query: 730 LPYSSGTTGLPKGVMLSHRGLVTSV 804
L YSSGTT KGV+ +HR L++ V
Sbjct: 394 LLYSSGTTXPSKGVVATHRNLISMV 468
Score = 22.6 bits (43), Expect(2) = 5e-004
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -2 / -1
Query: 785 RCDSITPLGSPVVPDE 738
RC + TPL VVP+E
Sbjct: 449 RCVATTPLLGXVVPEE 402
>gb|AL510866.1|AL510866 AL510866 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY06D22u 3',
mRNA sequence
Length = 513
Score = 75.8 bits (159), Expect = 8e-013
Identities = 31/67 (46%), Positives = 44/67 (65%)
Frame = +1 / -1
Query: 1570 AVVQMKDDSCGEIPVAFVVASGGSGITEDEIKQYVAKQVVFYKRLHKIFFVEAIPKAPSG 1749
A++ D G+ P+ +VV GS ++ E+ ++VAKQV YK++ K+ FV IPK SG
Sbjct: 492 ALIPFPDREVGQFPMXYVVRKKGSNLSAQEVMEFVAKQVAPYKKVRKVAFVTDIPKNASG 313
Query: 1750 KILRKDL 1770
KILRKDL
Sbjct: 312 KILRKDL 292
Score = 45.5 bits (93), Expect = 0.001
Identities = 20/39 (51%), Positives = 24/39 (61%)
Frame = -2 / +2
Query: 1772 LRSFLKILPDGALGMASTKKILCSLL*NTTCFATYCLIS 1656
+RSFL ILPD LGM+ T + L* TCFAT + S
Sbjct: 290 IRSFLSILPDAFLGMSVTNATFLTFL*GATCFATNSITS 406
Score = 39.1 bits (79), Expect = 0.086
Identities = 17/34 (50%), Positives = 21/34 (61%)
Frame = +3 / -3
Query: 1668 VRGETGGVLQEAAQDLLRGGHPQGAIRQDFKEGS 1769
V GETG LQE + +R HPQ + QD +EGS
Sbjct: 394 VCGETGSTLQEGEEGGVRDRHPQECVWQDTEEGS 293
Score = 33.1 bits (66), Expect = 5.3
Identities = 19/39 (48%), Positives = 22/39 (56%)
Frame = -1 / +1
Query: 1770 QILP*NLAGWRLGDGLHEEDLVQPLVEHHLFRHVLLDLV 1654
+ILP LA LGD HE L LV +LFRH L L+
Sbjct: 292 KILPQYLARRILGDVCHERHLPHLLVRCYLFRHKLHHLL 408
>gb|AL508215.1|AL508215 AL508215 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY08B20V 5',
mRNA sequence
Length = 636
Score = 68.0 bits (142), Expect(2) = 1e-012
Identities = 27/69 (39%), Positives = 43/69 (62%)
Frame = +1 / +2
Query: 1414 GWLHTGDIGYVDDGDEIFIVDRLKELIKYKGFQVAPAELEAMLIAHPSIVDAAVVQMKDD 1593
GWLHTGD+ I + DR K++I G ++ E+E+++ +HP++++AAVV D+
Sbjct: 410 GWLHTGDLAVRHPDGYIQLKDRAKDIIISGGENISSIEVESVIFSHPAVLEAAVVARPDE 589
Query: 1594 SCGEIPVAF 1620
GE P AF
Sbjct: 590 HWGETPCAF 616
Score = 57.4 bits (119), Expect = 3e-007
Identities = 28/69 (40%), Positives = 36/69 (52%)
Frame = -2 / -1
Query: 1619 NATGISPQESSFIWTTAASTMLGWXXXXXXXXXXATWNPLYLMSSLSRSTMKISSPSSTY 1440
NA G+SPQ SS + TTAAS+ GW ++P +M SL+RS +
Sbjct: 615 NAHGVSPQCSSGLATTAASSTAGWLKITDSTSMELMFSPPDMMMSLARSLSWMYPSGCRT 436
Query: 1439 PMSPVCSHP 1413
SPVCSHP
Sbjct: 435 ARSPVCSHP 409
Score = 26.3 bits (51), Expect(2) = 1e-012
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +1 / +2
Query: 1330 GEICIRGKQLMKGYLNNPEATAKTI 1404
GE+ RG +M GY + +AT + +
Sbjct: 329 GEVMFRGNTVMSGYYRDIDATKEAM 403
>gb|CA013766.1|CA013766 HT09G19r HT Hordeum vulgare subsp. vulgare cDNA clone HT09G19
5-PRIME, mRNA sequence
Length = 647
Score = 68.9 bits (144), Expect = 9e-011
Identities = 26/56 (46%), Positives = 35/56 (62%)
Frame = +1 / +2
Query: 1330 GEICIRGKQLMKGYLNNPEATAKTIDSEGWLHTGDIGYVDDGDEIFIVDRLKELIK 1497
GEIC+RG + +GY + T ID++GWLHTGDIG G + I+DR K + K
Sbjct: 404 GEICVRGPTIFRGYYKDEVQTRDVIDNDGWLHTGDIGLWLPGGRLKIIDRKKNIFK 571
Score = 38.2 bits (77), Expect = 0.16
Identities = 21/42 (50%), Positives = 23/42 (54%)
Frame = -2 / -3
Query: 1454 PSSTYPMSPVCSHPSESMVFAVASGLLRYPFINCLPLMQISP 1329
P S PMSPVC+ PS SM V + L P PL QISP
Sbjct: 528 PGSHKPMSPVCNQPSLSMTSLVWTSSL**PRNIVGPLTQISP 403
>gb|BF267935.2|BF267935 HV_CEa0019F15f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0019F15f, mRNA sequence
Length = 812
Score = 60.2 bits (125), Expect(2) = 1e-010
Identities = 30/103 (29%), Positives = 51/103 (49%)
Frame = +1 / -2
Query: 1474 DRLKELIKYKGFQVAPAELEAMLIAHPSIVDAAVVQMKDDSCGEIPVAFVVASGGSGITE 1653
DR K++I G ++ E+EA L AHP++ +AAVV D+ G P AFVV +
Sbjct: 484 DRSKDIIISGGENISTIEVEAALFAHPAVAEAAVVGRPDEH*GHTPCAFVVVKNRQRVDP 305
Query: 1654 DEIKQYVAKQVVFYKRLHKIFFVEAIPKAPSGKILRKDLRAKL 1782
+++ + ++ Y V+ + SGK+ + R K+
Sbjct: 304 EQVVAFCRRRKPQYMAQRTQVIVQQMHNKTSGKVHKFARRQKV 176
Score = 31.3 bits (62), Expect(2) = 0.034
Identities = 19/51 (37%), Positives = 23/51 (45%)
Frame = -2 / +3
Query: 1625 TTNATGISPQESSFIWTTAASTMLGWXXXXXXXXXXATWNPLYLMSSLSRS 1473
TTNA G+ P SS TTAAS G ++P +M SL S
Sbjct: 333 TTNAHGVCP*CSSGRPTTAASATAGCANSAASTSMVLMFSPPEMMMSLDLS 485
Score = 26.7 bits (52), Expect(2) = 0.034
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = -1 / +2
Query: 1398 LRRCLRVVEVPFHQLLAPDANLP 1330
LRR RV+ VP H +AP+ +LP
Sbjct: 560 LRRGGRVLVVPAHHGVAPEHHLP 628
Score = 26.7 bits (52), Expect(2) = 1e-010
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +1 / -2
Query: 1330 GEICIRGKQLMKGYLNNPEATAKTI 1404
G++ RG +M GY + ATA+ +
Sbjct: 628 GKVMFRGNTVMSGYYKDAPATAEAL 554
>gb|BQ762266.1|BQ762266 EBro01_SQ005_F10_R root, 3 week, hydroponic grown, no treatment, cv
Optic, EBro01 Hordeum vulgare subsp. vulgare cDNA clone
EBro01_SQ005_F10 5', mRNA sequence
Length = 442
Score = 66.6 bits (139), Expect = 5e-010
Identities = 28/58 (48%), Positives = 37/58 (63%)
Frame = +1 / +3
Query: 199 RSTLPDIAIPDHLPLHDYVLERLAERRDRACLIDGATGETLTFGDVDRLSRRVAAGMR 372
RS L DI IP+ L Y ++AE R C+IDG TG + T+ +V+ LSRR AAG+R
Sbjct: 210 RSRLXDIEIPNEQTLQSYCFAKMAEVGSRPCIIDGQTGASYTYAEVESLSRRAAAGLR 383
>gb|AV913361.1|AV913361 AV913361 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags21m17 5', mRNA sequence
Length = 552
Score = 64.8 bits (135), Expect = 2e-009
Identities = 26/56 (46%), Positives = 34/56 (60%)
Frame = +1 / +1
Query: 1330 GEICIRGKQLMKGYLNNPEATAKTIDSEGWLHTGDIGYVDDGDEIFIVDRLKELIK 1497
GEIC RG + +GY + T + ID +GWLHTGDIG G + I+DR K + K
Sbjct: 124 GEICARGPIIFQGYYKDEVQTREVIDEDGWLHTGDIGLWLPGGLLKIIDRKKNIFK 291
Score = 37.3 bits (75), Expect = 0.30
Identities = 20/44 (45%), Positives = 23/44 (52%)
Frame = -2 / -2
Query: 1460 SSPSSTYPMSPVCSHPSESMVFAVASGLLRYPFINCLPLMQISP 1329
S P S PMSPVC+ PS SM V + L P+ P ISP
Sbjct: 254 SPPGSHKPMSPVCNQPSSSMTSLV*TSSL**PWNIIGPRAHISP 123
>gb|BM443397.1|BM443397 EBro02_SQ003_O24_R root, 3 week, hydroponic grown, low nitrogen, cv
Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone
EBro02_SQ003_O24 5', mRNA sequence
Length = 364
Score = 64.8 bits (135), Expect = 2e-009
Identities = 24/45 (53%), Positives = 37/45 (82%)
Frame = +1 / +2
Query: 1636 GSGITEDEIKQYVAKQVVFYKRLHKIFFVEAIPKAPSGKILRKDL 1770
GS +TE ++ ++VAKQV YK++ K+ FV++IPK+P+GKILR+ L
Sbjct: 2 GSKVTEAQVMEHVAKQVAPYKKVRKVVFVDSIPKSPAGKILRRQL 136
Score = 39.6 bits (80), Expect = 0.062
Identities = 19/38 (50%), Positives = 22/38 (57%)
Frame = -2 / -2
Query: 1760 LKILPDGALGMASTKKILCSLL*NTTCFATYCLISSSV 1647
LKI P G LGM ST L + L TCFAT + +SV
Sbjct: 126 LKIFPAGDLGMESTNTTLRTFLYGATCFATCSMTCASV 13
>emb|AJ234602.1|HVU234602 Hordeum vulgare genomic DNA fragment; clone MWG0872.uni
Length = 273
Score = 64.8 bits (135), Expect = 2e-009
Identities = 28/49 (57%), Positives = 34/49 (69%)
Frame = +1 / +1
Query: 421 NSVEFALAFLACSRLGAAATTANPLHTPPEIAKQAAASGATVVITEPAF 567
N VEFA+AF S LGA +T ANP TP EI KQ ASGA V++T+ A+
Sbjct: 1 NCVEFAVAFFGASFLGAISTAANPFCTPQEIHKQFVASGAKVIVTQSAY 147
Score = 53.8 bits (111), Expect = 3e-006
Identities = 24/44 (54%), Positives = 31/44 (70%)
Frame = -2 / -2
Query: 554 VMTTVAPEAAACLAISGGVWSGLAVVAAAPRREHARNASANSTE 423
V T+APEA CL IS GV +GLA V APR++ + A+ANST+
Sbjct: 134 VTITLAPEATNCLWISCGVQNGLAAVLMAPRKDAPKKATANSTQ 3
>gb|CA018049.1|CA018049 HV07E04r HV Hordeum vulgare subsp. vulgare cDNA clone HV07E04
5-PRIME, mRNA sequence
Length = 568
Score = 64.3 bits (134), Expect = 2e-009
Identities = 24/50 (48%), Positives = 32/50 (64%)
Frame = +1 / +2
Query: 1330 GEICIRGKQLMKGYLNNPEATAKTIDSEGWLHTGDIGYVDDGDEIFIVDR 1479
GEIC+RG + +GY + T ID++GWLHTGDIG G + I+DR
Sbjct: 419 GEICVRGPTIFRGYYKDEVQTRDVIDNDGWLHTGDIGLWLPGGRLKIIDR 568
Score = 38.2 bits (77), Expect = 0.16
Identities = 21/42 (50%), Positives = 23/42 (54%)
Frame = -2 / -2
Query: 1454 PSSTYPMSPVCSHPSESMVFAVASGLLRYPFINCLPLMQISP 1329
P S PMSPVC+ PS SM V + L P PL QISP
Sbjct: 543 PGSHKPMSPVCNQPSLSMTSLVWTSSL**PRNIVGPLTQISP 418
>gb|CB881465.1|CB881465 HM09O10w HM Hordeum vulgare subsp. vulgare cDNA clone HM09O10
3-PRIME, mRNA sequence
Length = 458
Score = 56.5 bits (117), Expect(2) = 6e-009
Identities = 23/65 (35%), Positives = 41/65 (63%)
Frame = +1 / -3
Query: 1462 IFIVDRLKELIKYKGFQVAPAELEAMLIAHPSIVDAAVVQMKDDSCGEIPVAFVVASGGS 1641
I + DR+K++I G ++ E+E ++ HP++++A+VV DD GE P AFV G+
Sbjct: 435 IEVKDRMKDIIISGGENISTLEVEKVVYMHPAVLEASVVARADDRWGESPCAFVTLKEGA 256
Query: 1642 GITED 1656
G +++
Sbjct: 255 GGSDE 241
Score = 38.2 bits (77), Expect = 0.16
Identities = 22/67 (32%), Positives = 29/67 (43%)
Frame = -2 / +2
Query: 1673 TYCLISSSVIPEPPDATTNATGISPQESSFIWTTAASTMLGWXXXXXXXXXXATWNPLYL 1494
++ +SS P P TNA G SP SS + TT AS G ++P +
Sbjct: 224 SFASATSSEPPAPSLRVTNAQGDSPHRSSALATTEASRTAGCMYTTFSTSRVLMFSPPEM 403
Query: 1493 MSSLSRS 1473
M S RS
Sbjct: 404 MMSFIRS 424
Score = 24.9 bits (48), Expect(2) = 6e-009
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +1 / -3
Query: 1729 IPKAPSGKILRKDLRAK 1779
+PK +GKI + +LRAK
Sbjct: 156 LPKTATGKIKKHELRAK 106
>gb|BQ665660.1|BQ665660 HX04J15u HX Hordeum vulgare subsp. vulgare cDNA clone HX04J15
3-PRIME, mRNA sequence
Length = 531
Score = 55.6 bits (115), Expect(2) = 1e-008
Identities = 22/61 (36%), Positives = 39/61 (63%)
Frame = +1 / -2
Query: 1474 DRLKELIKYKGFQVAPAELEAMLIAHPSIVDAAVVQMKDDSCGEIPVAFVVASGGSGITE 1653
DR+K++I G ++ E+E ++ HP++++A+VV DD GE P AFV G+G ++
Sbjct: 527 DRMKDIIISGGENISTLEVEKVVYMHPAVLEASVVARADDRWGESPCAFVTLKEGAGGSD 348
Query: 1654 D 1656
+
Sbjct: 347 E 345
Score = 38.2 bits (77), Expect = 0.16
Identities = 22/67 (32%), Positives = 29/67 (43%)
Frame = -2 / +1
Query: 1673 TYCLISSSVIPEPPDATTNATGISPQESSFIWTTAASTMLGWXXXXXXXXXXATWNPLYL 1494
++ +SS P P TNA G SP SS + TT AS G ++P +
Sbjct: 328 SFASATSSEPPAPSLRVTNAQGDSPHRSSALATTEASRTAGCMYTTFSTSRVLMFSPPEM 507
Query: 1493 MSSLSRS 1473
M S RS
Sbjct: 508 MMSFIRS 528
Score = 24.9 bits (48), Expect(2) = 1e-008
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +1 / -2
Query: 1729 IPKAPSGKILRKDLRAK 1779
+PK +GKI + +LRAK
Sbjct: 260 LPKTATGKIKKHELRAK 210
>gb|BQ763564.1|BQ763564 EBro02_SQ008_E19 _R root, 3 week, hydroponic grown, low nitrogen, cv
Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone
EBro02_SQ008_E19 5', mRNA sequence
Length = 518
Score = 53.3 bits (110), Expect(2) = 1e-008
Identities = 26/89 (29%), Positives = 47/89 (52%)
Frame = +1 / +3
Query: 1414 GWLHTGDIGYVDDGDEIFIVDRLKELIKYKGFQVAPAELEAMLIAHPSIVDAAVVQMKDD 1593
G+ TGD +D ++ R+ ++I G ++ AE+E+ L++HP +AAVV ++ +
Sbjct: 111 GYYFTGDGCNMDKDGYHWLTGRVHDVINVSGHRIGTAEVESALVSHPQCAEAAVVGVEHE 290
Query: 1594 SCGEIPVAFVVASGGSGITEDEIKQYVAK 1680
G+ AFV G +E+ K + K
Sbjct: 291 VKGQGIYAFVTLVDGVPYSEELRKSLITK 377
Score = 27.2 bits (53), Expect(2) = 1e-008
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +1 / +3
Query: 1672 VAKQVVFYKRLHKIFFVEAIPKAPSGKILRKDLR 1773
V Q+ + +I + +PK SGKI+R+ LR
Sbjct: 378 VRTQIGAFAAPDRIHWAPGLPKTRSGKIMRRILR 479
>gb|BI950284.1|BI950284 HVSMEl0020B13f Hordeum vulgare spike EST library HVcDNA0012 (Fusarium
infected) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEl0020B13f, mRNA sequence
Length = 574
Score = 60.6 bits (126), Expect = 3e-008
Identities = 26/63 (41%), Positives = 37/63 (58%)
Frame = +1 / +3
Query: 1474 DRLKELIKYKGFQVAPAELEAMLIAHPSIVDAAVVQMKDDSCGEIPVAFVVASGGSGITE 1653
DR K++I G ++ E+EA L AHP++ +AAVV D+ GE P AFVV G +
Sbjct: 126 DRSKDIIISGGENISTIEVEAALFAHPAVAEAAVVGRPDEHWGETPCAFVVVKNGERVEP 305
Query: 1654 DEI 1662
E+
Sbjct: 306 XEV 314
Score = 38.2 bits (77), Expect = 0.16
Identities = 24/62 (38%), Positives = 28/62 (45%)
Frame = -2 / -1
Query: 1658 SSSVIPEPPDATTNATGISPQESSFIWTTAASTMLGWXXXXXXXXXXATWNPLYLMSSLS 1479
SS P TTNA G+SPQ SS TTAAS G ++P +M SL
Sbjct: 310 SSGSTLSPFLTTTNAHGVSPQCSSGRPTTAASATAGCANSAASTSMVLMFSPPEMMMSLD 131
Query: 1478 RS 1473
S
Sbjct: 130 LS 125
>gb|BJ474400.1|BJ474400 BJ474400 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal13j23 3', mRNA sequence
Length = 733
Score = 60.6 bits (126), Expect = 3e-008
Identities = 28/75 (37%), Positives = 40/75 (53%)
Frame = +1 / -2
Query: 1414 GWLHTGDIGYVDDGDEIFIVDRLKELIKYKGFQVAPAELEAMLIAHPSIVDAAVVQMKDD 1593
GWL TGD G++D +++++ R K IK G V P E+E +L HP + A V + D
Sbjct: 696 GWLDTGDTGWIDRTGKLWLMGRQKGRIKSGGENVYPEEVELVLSQHPGVAKAVVFGVPDS 517
Query: 1594 SCGEIPVAFVVASGG 1638
GE V+ V G
Sbjct: 516 RLGEKIVSCVSIKDG 472
Score = 32.7 bits (65), Expect = 7.3
Identities = 24/93 (25%), Positives = 35/93 (37%)
Frame = -2 / +2
Query: 1691 NTTCFATYCLISSSVIPEPPDATTNATGISPQESSFIWTTAASTMLGWXXXXXXXXXXAT 1512
+T+ + +C +S +P T T SP+ S T A G T
Sbjct: 419 DTSLPSPWCSAVASTHLQPSLMLTQETIFSPRRLSGTPKTTALATPGCCDNTNSTSSG*T 598
Query: 1511 WNPLYLMSSLSRSTMKISSPSSTYPMSPVCSHP 1413
++P M R S +P+SPV SHP
Sbjct: 599 FSPPLFMRPFCRPMSHNLPVLSIHPVSPVSSHP 697
>gb|BQ463067.1|BQ463067 HI02O22r HI Hordeum vulgare subsp. vulgare cDNA clone HI02O22
5-PRIME, mRNA sequence
Length = 623
Score = 55.6 bits (115), Expect(2) = 7e-008
Identities = 20/37 (54%), Positives = 25/37 (67%)
Frame = +1 / +3
Query: 1330 GEICIRGKQLMKGYLNNPEATAKTIDSEGWLHTGDIG 1440
GEIC RG + +GY + T + ID +GWLHTGDIG
Sbjct: 510 GEICARGPIIFQGYYKDEVQTREVIDEDGWLHTGDIG 620
Score = 32.7 bits (65), Expect = 7.3
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = -2 / -2
Query: 1439 PMSPVCSHPSESMVFAVASGLLRYPFINCLPLMQISP 1329
PMSPVC+ PS SM V + L P+ P ISP
Sbjct: 619 PMSPVCNQPSSSMTSLV*TSSL**PWNIIGPRAHISP 509
Score = 22.1 bits (42), Expect(2) = 7e-008
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = +1 / +3
Query: 1165 QGYGMTEAGPVLSM 1206
+GYGMTE V+++
Sbjct: 351 EGYGMTETSCVITL 392
>gb|AL511453.1|AL511453 AL511453 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY08B20u 3',
mRNA sequence
Length = 572
Score = 52.4 bits (108), Expect(2) = 9e-008
Identities = 23/79 (29%), Positives = 44/79 (55%)
Frame = +1 / -2
Query: 1483 KELIKYKGFQVAPAELEAMLIAHPSIVDAAVVQMKDDSCGEIPVAFVVASGGSGITEDEI 1662
+++I G ++ E+E+++ +HP++++AAVV D+ GE P AFV G+ TE I
Sbjct: 442 RDIIISGGENISSIEVESVIFSHPAVLEAAVVARPDEHWGETPCAFVKLKDGARATEAGI 263
Query: 1663 KQYVAKQVVFYKRLHKIFF 1719
+ +++ Y + F
Sbjct: 262 IGFCRERMPHYMAPKTVVF 206
Score = 46.9 bits (96), Expect(2) = 1e-005
Identities = 24/61 (39%), Positives = 33/61 (54%)
Frame = -2 / +3
Query: 1664 LISSSVIPEPPDATTNATGISPQESSFIWTTAASTMLGWXXXXXXXXXXATWNPLYLMSS 1485
+I +SV P + TNA G+SPQ SS + TTAAS+ GW ++P +M S
Sbjct: 261 MIPASVALAPSFSFTNAHGVSPQCSSGLATTAASSTAGWLKITDSTSMELMFSPPDMMMS 440
Query: 1484 L 1482
L
Sbjct: 441 L 443
Score = 24.9 bits (48), Expect(2) = 9e-008
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +1 / -3
Query: 1414 GWLHTGDI 1437
GWLHTGD+
Sbjct: 513 GWLHTGDL 490
Score = 23.1 bits (44), Expect(2) = 1e-005
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = -2 / +2
Query: 1454 PSSTYPMSPVCSHP 1413
P SPVCSHP
Sbjct: 473 PGCRTARSPVCSHP 514
>gb|BQ661571.1|BQ661571 HM04B05u HM Hordeum vulgare subsp. vulgare cDNA clone HM04B05
3-PRIME, mRNA sequence
Length = 451
Score = 45.5 bits (93), Expect(2) = 9e-008
Identities = 19/59 (32%), Positives = 32/59 (54%)
Frame = +1 / -2
Query: 1483 KELIKYKGFQVAPAELEAMLIAHPSIVDAAVVQMKDDSCGEIPVAFVVASGGSGITEDE 1659
KELI G +++P E++++L+ HP + A + DD GE V+ GG+ + E
Sbjct: 450 KELINRGGEKISPIEVDSVLLGHPDVAQAVSFGVPDDKYGEEIHCAVIPRGGAAVALGE 274
Score = 31.8 bits (63), Expect(2) = 9e-008
Identities = 11/38 (28%), Positives = 22/38 (57%)
Frame = +1 / -2
Query: 1651 EDEIKQYVAKQVVFYKRLHKIFFVEAIPKAPSGKILRK 1764
E+E+ + K + +K K++ + +PK +GKI R+
Sbjct: 276 EEEVVAFCRKNLAAFKVPKKVYIADDLPKTATGKIQRR 163
>gb|BI960111.1|BI960111 HVSMEn0023E11f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0023E11f,
mRNA sequence
Length = 628
Score = 47.3 bits (97), Expect(2) = 4e-005
Identities = 19/47 (40%), Positives = 26/47 (55%)
Frame = -1 / -1
Query: 1050 VALDHLHRDGQHERHDRDAVPLHQLEHAESVEALHDHERRAGAHPAQ 910
+ LDH H+DG+ R AVPL+ + VE LH+H R H A+
Sbjct: 391 LGLDHGHQDGRRRGQQRGAVPLYGAQRGAEVEPLHEHGRLPHGHGAK 251
Score = 37.7 bits (76), Expect(3) = 2e-007
Identities = 15/49 (30%), Positives = 28/49 (57%)
Frame = +1 / +2
Query: 904 ILLCGMRAGAALVIMKRFDTLRMFELVKRHGITIVPLVLPIAVEMVKSD 1050
++L + G V+M+RFD ++R+ T++P P+ V M+KS+
Sbjct: 245 MVLRSVSMGETAVLMERFDFGAALRAIERYRATLLPAAPPVLVAMIKSE 391
Score = 32.7 bits (65), Expect(3) = 2e-007
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +1 / +2
Query: 736 YSSGTTGLPKGVMLSHRGLVTSV 804
YSSGTTG K V ++HR L+ +
Sbjct: 56 YSSGTTGRVKAVAITHRNLIALI 124
Score = 24.4 bits (47), Expect(2) = 4e-005
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -2 / -2
Query: 785 RCDSITPLGSPVVPDE 738
RC T L PVVPDE
Sbjct: 105 RCVMATALTRPVVPDE 58
Score = 22.6 bits (43), Expect(3) = 2e-007
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +1 / +2
Query: 856 VVLCVLPMFHVYSLHSIL 909
V L LP+FHV+ +L
Sbjct: 200 VTLLPLPLFHVFGFMMVL 253
>gb|BQ765790.1|BQ765790 EBro03_SQ008_M06_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ008_M06 5', mRNA sequence
Length = 664
Score = 47.3 bits (97), Expect(2) = 2e-007
Identities = 18/52 (34%), Positives = 31/52 (59%)
Frame = +1 / +1
Query: 1414 GWLHTGDIGYVDDGDEIFIVDRLKELIKYKGFQVAPAELEAMLIAHPSIVDA 1569
GWL +GD+G + + DR K++I G ++ E+E+ L HP+++DA
Sbjct: 208 GWLRSGDLGVRHPDGYVQLKDRSKDIIISGGENISSIEVESALFGHPAVLDA 363
Score = 30.9 bits (61), Expect(4) = 2e-007
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = -2 / -2
Query: 1664 LISSSVIPEPPDATTNATGISPQESSFIWTT 1572
++S+SV P TNA G+SPQ SS + TT
Sbjct: 459 IMSASVALAPSLRVTNAHGVSPQWSSGLATT 367
Score = 29.9 bits (59), Expect(4) = 2e-007
Identities = 16/52 (30%), Positives = 20/52 (38%)
Frame = -2 / -3
Query: 1568 ASTMLGWXXXXXXXXXXATWNPLYLMSSLSRSTMKISSPSSTYPMSPVCSHP 1413
AS+ GW ++P +M SL RS P SP SHP
Sbjct: 362 ASSTAGWPNSADSTSMELMFSPPDMMMSLDRSLSWTYPSGCRTPRSPERSHP 207
Score = 29.0 bits (57), Expect(2) = 2e-007
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +1 / +1
Query: 1330 GEICIRGKQLMKGYLNNPEATAKTI 1404
GE+ +RG +M GY + ATA+ +
Sbjct: 127 GEVMLRGNTVMSGYYKDAAATAEAM 201
Score = 24.4 bits (47), Expect(4) = 2e-007
Identities = 7/15 (46%), Positives = 8/15 (53%)
Frame = -3 / -3
Query: 1738 PWGWPPRRRSCAASC 1694
PW WP +ASC
Sbjct: 584 PWPWPSHGADTSASC 540
Score = 23.5 bits (45), Expect(4) = 2e-007
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = -1 / -2
Query: 1416 PLRVDGLRRCLRVVEVPFHQLLAPDANLPGLVAVEG 1309
P + GLRR RV+ +P H + + +L V G
Sbjct: 213 PPALHGLRRRRRVLVIPAHHRVPSEHHLADGAPVGG 106
>gb|AV913041.1|AV913041 AV913041 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags11i19 5', mRNA sequence
Length = 630
Score = 39.1 bits (79), Expect(3) = 3e-007
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = +1 / +1
Query: 1411 EGWLHTGDIGYVDDGDEIFIVDRLKELIKYKGFQVAPAELEAMLIAHPSIVD 1566
+GW HTGDIG + + ++DR K + K + E + P I++
Sbjct: 373 DGWFHTGDIGEMTPDGILKVIDRKKNIFKLSQGEYVAVEYLEKVYVFPPIIE 528
Score = 30.9 bits (61), Expect(3) = 3e-007
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +1 / +1
Query: 1330 GEICIRGKQLMKGYLNNPEAT 1392
GEI IRG + GY NPE T
Sbjct: 295 GEILIRGTTVFTGYYKNPELT 357
Score = 29.9 bits (59), Expect(2) = 0.93
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -2 / -2
Query: 1406 SMVFAVASGLLRYPFINCLPLMQISP 1329
+M V+SG L YP +PLM+ISP
Sbjct: 371 TMTSFVSSGFL*YPVKTVVPLMRISP 294
Score = 28.1 bits (55), Expect(3) = 3e-007
Identities = 9/20 (45%), Positives = 16/20 (80%)
Frame = +1 / +1
Query: 1078 VRMVISGAAPMGKELQDLLR 1137
+R++ISG AP+ E+++ LR
Sbjct: 52 LRLLISGGAPLSTEIEEFLR 111
Score = 23.1 bits (44), Expect(2) = 0.93
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -2 / -2
Query: 1439 PMSPVCSHPSESMVF 1395
PMSPV +HPS F
Sbjct: 401 PMSPV*NHPSTMTSF 357
>gb|BG345167.2|BG345167 HVSMEg0018P07f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0018P07f, mRNA sequence
Length = 837
Score = 39.6 bits (80), Expect(2) = 3e-007
Identities = 19/58 (32%), Positives = 28/58 (48%)
Frame = +1 / +1
Query: 379 LGVRSGGTVMLLLPNSVEFALAFLACSRLGAAATTANPLHTPPEIAKQAAASGATVVI 552
+G+R G V++ LPN + + L GA + NP EI KQ S A +V+
Sbjct: 274 VGIRKGHVVVVALPNLAVYPVVSLGVMAAGAVFSGVNPRSLDAEIRKQVEDSEARLVV 447
Score = 35.9 bits (72), Expect(2) = 3e-007
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +1 / +1
Query: 193 VFRSTLPDIAIPDHLPLHDYVLERLAERRDRACLIDGATG 312
+FRS P +A+PD + + ++VL D+ L++ A G
Sbjct: 88 IFRSRFPPVAVPDAVTVPEFVLAGAQAYADKIALVEAAPG 207
>gb|BU978200.1|BU978200 HA12L21r HA Hordeum vulgare subsp. vulgare cDNA clone HA12L21
5-PRIME, mRNA sequence
Length = 570
Score = 38.2 bits (77), Expect(3) = 4e-007
Identities = 15/51 (29%), Positives = 24/51 (47%)
Frame = +1 / +1
Query: 1411 EGWLHTGDIGYVDDGDEIFIVDRLKELIKYKGFQVAPAELEAMLIAHPSIV 1563
+GW HTGDIG + + ++DR K + K + E + P I+
Sbjct: 418 DGWFHTGDIGEMTPDGILKVIDRKKNIFKLSQGEYVAVEYLEKVYVFPPII 570
Score = 30.9 bits (61), Expect(3) = 4e-007
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +1 / +1
Query: 1330 GEICIRGKQLMKGYLNNPEAT 1392
GEI IRG + GY NPE T
Sbjct: 340 GEILIRGTTVFTGYYKNPELT 402
Score = 29.9 bits (59), Expect(2) = 0.93
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -2 / -2
Query: 1406 SMVFAVASGLLRYPFINCLPLMQISP 1329
+M V+SG L YP +PLM+ISP
Sbjct: 416 TMTSFVSSGFL*YPVKTVVPLMRISP 339
Score = 28.1 bits (55), Expect(3) = 4e-007
Identities = 9/20 (45%), Positives = 16/20 (80%)
Frame = +1 / +1
Query: 1078 VRMVISGAAPMGKELQDLLR 1137
+R++ISG AP+ E+++ LR
Sbjct: 97 LRLLISGGAPLSTEIEEFLR 156
Score = 23.1 bits (44), Expect(2) = 0.93
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -2 / -2
Query: 1439 PMSPVCSHPSESMVF 1395
PMSPV +HPS F
Sbjct: 446 PMSPV*NHPSTMTSF 402
>gb|CK123786.1|CK123786 BES1824105f17 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010F175 5-PRIME, mRNA sequence
Length = 774
Score = 39.1 bits (79), Expect(3) = 4e-007
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = +1 / +1
Query: 1411 EGWLHTGDIGYVDDGDEIFIVDRLKELIKYKGFQVAPAELEAMLIAHPSIVD 1566
+GW HTGDIG + + ++DR K + K + E + P I++
Sbjct: 352 DGWFHTGDIGEMTPDGILKVIDRKKNIFKLSQGEYVAVEYLEKVYVFPPIIE 507
Score = 30.9 bits (61), Expect(3) = 4e-007
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +1 / +1
Query: 1330 GEICIRGKQLMKGYLNNPEAT 1392
GEI IRG + GY NPE T
Sbjct: 274 GEILIRGTTVFTGYYKNPELT 336
Score = 29.9 bits (59), Expect(2) = 0.92
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -2 / -2
Query: 1406 SMVFAVASGLLRYPFINCLPLMQISP 1329
+M V+SG L YP +PLM+ISP
Sbjct: 350 TMTSFVSSGFL*YPVKTVVPLMRISP 273
Score = 28.1 bits (55), Expect(3) = 4e-007
Identities = 9/20 (45%), Positives = 16/20 (80%)
Frame = +1 / +1
Query: 1078 VRMVISGAAPMGKELQDLLR 1137
+R++ISG AP+ E+++ LR
Sbjct: 31 LRLLISGGAPLSTEIEEFLR 90
Score = 23.1 bits (44), Expect(2) = 0.92
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -2 / -2
Query: 1439 PMSPVCSHPSESMVF 1395
PMSPV +HPS F
Sbjct: 380 PMSPV*NHPSTMTSF 336
>gb|BF259938.3|BF259938 HVSMEf0020K19f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0020K19f, mRNA sequence
Length = 534
Score = 54.2 bits (112), Expect = 2e-006
Identities = 26/54 (48%), Positives = 31/54 (57%)
Frame = +1 / +3
Query: 208 LPDIAIPDHLPLHDYVLERLAERRDRACLIDGATGETLTFGDVDRLSRRVAAGM 369
LPDI IP L L +AE R C+I+G TG T G+VD LSR AAG+
Sbjct: 216 LPDIGIPSEPTLRSS*LTEMAEVGCRPCIINGRTGNVYTDGEVDFLSRSTAAGL 377
>gb|BJ466987.1|BJ466987 BJ466987 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags35g07 3', mRNA sequence
Length = 521
Score = 46.9 bits (96), Expect(2) = 4e-006
Identities = 18/51 (35%), Positives = 32/51 (62%)
Frame = +1 / -1
Query: 1504 GFQVAPAELEAMLIAHPSIVDAAVVQMKDDSCGEIPVAFVVASGGSGITED 1656
G ++ E+E ++ HP++++A+VV DD GE P AFV G+G +++
Sbjct: 461 GENISTLEVEKVVYMHPAVLEASVVARADDRWGESPCAFVTLKEGAGGSDE 309
Score = 32.7 bits (65), Expect = 7.3
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = -2 / +1
Query: 1673 TYCLISSSVIPEPPDATTNATGISPQESSFIWTTAASTMLG 1551
++ +SS P P TNA G SP SS + TT AS G
Sbjct: 292 SFASATSSEPPAPSLRVTNAQGDSPHRSSALATTEASRTAG 414
Score = 24.9 bits (48), Expect(2) = 4e-006
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +1 / -1
Query: 1729 IPKAPSGKILRKDLRAK 1779
+PK +GKI + +LRAK
Sbjct: 224 LPKTATGKIKKHELRAK 174
>gb|BU990554.1|BU990554 HF25G09r HF Hordeum vulgare subsp. vulgare cDNA clone HF25G09
5-PRIME, mRNA sequence
Length = 696
Score = 38.2 bits (77), Expect(2) = 5e-006
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = +1 / +2
Query: 1408 SEGWLHTGDIGYVDDGDEIFIVDRLKELIKYKGFQVAPAELEAMLIAHPSIV 1563
S+GW HTGDIG + I+DR K + K + E+ A +V
Sbjct: 137 SDGWFHTGDIGEWQPDGTMKIIDRKKNIFKLSQGEYVAVEVLESAYAQSQLV 292
Score = 33.1 bits (66), Expect(2) = 5e-006
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +1 / +2
Query: 1330 GEICIRGKQLMKGYLNNPEAT 1392
GEIC+RG+ L GY P+ T
Sbjct: 62 GEICLRGQTLFSGYYKRPDLT 124
>gb|BU969149.1|BU969149 HB10K23r BC Hordeum vulgare subsp. vulgare cDNA clone HB10K23
5-PRIME, mRNA sequence
Length = 611
Score = 38.2 bits (77), Expect(2) = 5e-006
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = +1 / +3
Query: 1408 SEGWLHTGDIGYVDDGDEIFIVDRLKELIKYKGFQVAPAELEAMLIAHPSIV 1563
S+GW HTGDIG + I+DR K + K + E+ A +V
Sbjct: 105 SDGWFHTGDIGEWQPDGTMKIIDRKKNIFKLSQGEYVAVEVLESAYAQSQLV 260
Score = 33.1 bits (66), Expect(2) = 5e-006
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +1 / +3
Query: 1330 GEICIRGKQLMKGYLNNPEAT 1392
GEIC+RG+ L GY P+ T
Sbjct: 30 GEICLRGQTLFSGYYKRPDLT 92
>gb|BU982992.1|BU982992 HA28D13r HA Hordeum vulgare subsp. vulgare cDNA clone HA28D13
5-PRIME, mRNA sequence
Length = 487
Score = 37.7 bits (76), Expect(2) = 9e-006
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = +1 / +3
Query: 1330 GEICIRGKQLMKGYLNNPEATAK 1398
GEI +RG +MKGYL NP+A A+
Sbjct: 321 GEIVMRGNAVMKGYLKNPKANAE 389
Score = 34.1 bits (68), Expect = 2.8
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +3 / +2
Query: 1320 QPARGDLHQGQAVDERVPQQPGG 1388
Q RGD H+GQ DE +P++P G
Sbjct: 311 QVLRGDRHEGQRCDEGLPEEPQG 379
Score = 32.7 bits (65), Expect(2) = 9e-006
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +1 / +3
Query: 1408 SEGWLHTGDIGYVDDGDEIFIVDRLKELI 1494
+ GW H+GD+G I + DR+K++I
Sbjct: 396 AHGWYHSGDLGVKHPDGYIEVKDRMKDII 482
Score = 32.7 bits (65), Expect = 7.3
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = -2 / -1
Query: 1394 AVASGLLRYPFINCLPLMQISP 1329
A+A G R PFI LPLM ISP
Sbjct: 385 ALALGFFR*PFITALPLMTISP 320
>gb|AV920735.1|AV920735 AV920735 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags15g01 3', mRNA sequence
Length = 701
Score = 39.1 bits (79), Expect(2) = 1e-005
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = +1 / -3
Query: 1411 EGWLHTGDIGYVDDGDEIFIVDRLKELIKYKGFQVAPAELEAMLIAHPSIVD 1566
+GW HTGDIG + + ++DR K + K + E + P I++
Sbjct: 618 DGWFHTGDIGEMTPDGILKVIDRKKNIFKLSQGEYVAVEYLEKVYVFPPIIE 463
Score = 30.9 bits (61), Expect(2) = 1e-005
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +1 / -3
Query: 1330 GEICIRGKQLMKGYLNNPEAT 1392
GEI IRG + GY NPE T
Sbjct: 696 GEILIRGTTVFTGYYKNPELT 634
Score = 29.9 bits (59), Expect(2) = 0.92
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -2 / +2
Query: 1406 SMVFAVASGLLRYPFINCLPLMQISP 1329
+M V+SG L YP +PLM+ISP
Sbjct: 620 TMTSFVSSGFL*YPVKTVVPLMRISP 697
Score = 23.1 bits (44), Expect(2) = 0.92
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -2 / +2
Query: 1439 PMSPVCSHPSESMVF 1395
PMSPV +HPS F
Sbjct: 590 PMSPV*NHPSTMTSF 634
>gb|BJ467948.1|BJ467948 BJ467948 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags30h02 3', mRNA sequence
Length = 694
Score = 39.1 bits (79), Expect(2) = 1e-005
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = +1 / -2
Query: 1411 EGWLHTGDIGYVDDGDEIFIVDRLKELIKYKGFQVAPAELEAMLIAHPSIVD 1566
+GW HTGDIG + + ++DR K + K + E + P I++
Sbjct: 612 DGWFHTGDIGEMTPDGILKVIDRKKNIFKLSQGEYVAVEYLEKVYVFPPIIE 457
Score = 30.9 bits (61), Expect(2) = 1e-005
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +1 / -2
Query: 1330 GEICIRGKQLMKGYLNNPEAT 1392
GEI IRG + GY NPE T
Sbjct: 690 GEILIRGTTVFTGYYKNPELT 628
Score = 29.9 bits (59), Expect(2) = 0.92
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -2 / +2
Query: 1406 SMVFAVASGLLRYPFINCLPLMQISP 1329
+M V+SG L YP +PLM+ISP
Sbjct: 614 TMTSFVSSGFL*YPVKTVVPLMRISP 691
Score = 23.1 bits (44), Expect(2) = 0.92
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -2 / +2
Query: 1439 PMSPVCSHPSESMVF 1395
PMSPV +HPS F
Sbjct: 584 PMSPV*NHPSTMTSF 628
>gb|BJ463772.1|BJ463772 BJ463772 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags30h02 5', mRNA sequence
Length = 642
Score = 39.1 bits (79), Expect(2) = 1e-005
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = +1 / +2
Query: 1411 EGWLHTGDIGYVDDGDEIFIVDRLKELIKYKGFQVAPAELEAMLIAHPSIVD 1566
+GW HTGDIG + + ++DR K + K + E + P I++
Sbjct: 296 DGWFHTGDIGEMTPDGILKVIDRKKNIFKLSQGEYVAVEYLEKVYVFPPIIE 451
Score = 30.9 bits (61), Expect(2) = 1e-005
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +1 / +2
Query: 1330 GEICIRGKQLMKGYLNNPEAT 1392
GEI IRG + GY NPE T
Sbjct: 218 GEILIRGTTVFTGYYKNPELT 280
Score = 29.9 bits (59), Expect(2) = 0.93
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -2 / -1
Query: 1406 SMVFAVASGLLRYPFINCLPLMQISP 1329
+M V+SG L YP +PLM+ISP
Sbjct: 294 TMTSFVSSGFL*YPVKTVVPLMRISP 217
Score = 23.1 bits (44), Expect(2) = 0.93
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -2 / -1
Query: 1439 PMSPVCSHPSESMVF 1395
PMSPV +HPS F
Sbjct: 324 PMSPV*NHPSTMTSF 280
>gb|CA001954.1|CA001954 HS06B15r HS Hordeum vulgare subsp. vulgare cDNA clone HS06B15
5-PRIME, mRNA sequence
Length = 523
Score = 39.1 bits (79), Expect(2) = 1e-005
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = +1 / +1
Query: 1411 EGWLHTGDIGYVDDGDEIFIVDRLKELIKYKGFQVAPAELEAMLIAHPSIVD 1566
+GW HTGDIG + + ++DR K + K + E + P I++
Sbjct: 238 DGWFHTGDIGEMTPDGILKVIDRKKNIFKLSQGEYVAVEYLEKVYVFPPIIE 393
Score = 30.9 bits (61), Expect(2) = 1e-005
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +1 / +1
Query: 1330 GEICIRGKQLMKGYLNNPEAT 1392
GEI IRG + GY NPE T
Sbjct: 160 GEILIRGTTVFTGYYKNPELT 222
Score = 29.9 bits (59), Expect(2) = 0.94
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -2 / -3
Query: 1406 SMVFAVASGLLRYPFINCLPLMQISP 1329
+M V+SG L YP +PLM+ISP
Sbjct: 236 TMTSFVSSGFL*YPVKTVVPLMRISP 159
Score = 23.1 bits (44), Expect(2) = 0.94
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -2 / -3
Query: 1439 PMSPVCSHPSESMVF 1395
PMSPV +HPS F
Sbjct: 266 PMSPV*NHPSTMTSF 222
>gb|BJ463781.1|BJ463781 BJ463781 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags30h13 5', mRNA sequence
Length = 478
Score = 39.1 bits (79), Expect(2) = 1e-005
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = +1 / +3
Query: 1411 EGWLHTGDIGYVDDGDEIFIVDRLKELIKYKGFQVAPAELEAMLIAHPSIVD 1566
+GW HTGDIG + + ++DR K + K + E + P I++
Sbjct: 306 DGWFHTGDIGEMTPDGILKVIDRKKNIFKLSQGEYVAVEYLEKVYVFPPIIE 461
Score = 30.9 bits (61), Expect(2) = 1e-005
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +1 / +3
Query: 1330 GEICIRGKQLMKGYLNNPEAT 1392
GEI IRG + GY NPE T
Sbjct: 228 GEILIRGTTVFTGYYKNPELT 290
Score = 29.9 bits (59), Expect(2) = 0.95
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -2 / -1
Query: 1406 SMVFAVASGLLRYPFINCLPLMQISP 1329
+M V+SG L YP +PLM+ISP
Sbjct: 304 TMTSFVSSGFL*YPVKTVVPLMRISP 227
Score = 23.1 bits (44), Expect(2) = 0.95
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -2 / -1
Query: 1439 PMSPVCSHPSESMVF 1395
PMSPV +HPS F
Sbjct: 334 PMSPV*NHPSTMTSF 290
>gb|BM098353.2|BM098353 EBem08_SQ002_K07_R embryo, 40 DPA, no treatment, cv Optic, EBem08
Hordeum vulgare subsp. vulgare cDNA clone
EBem08_SQ002_K07 5', mRNA sequence
Length = 380
Score = 49.6 bits (102), Expect = 6e-005
Identities = 23/58 (39%), Positives = 31/58 (53%)
Frame = +1 / +3
Query: 382 GVRSGGTVMLLLPNSVEFALAFLACSRLGAAATTANPLHTPPEIAKQAAASGATVVIT 555
G+R G TV L PN+VE + FLA R A NP +T E + SGA +++T
Sbjct: 183 GLRPGQTVALCFPNTVELVVMFLAVIRARGVAAPLNPAYTQEEFEFYLSDSGARLLVT 356
>gb|BI780833.2|BI780833 EBma05_SQ001_B11_R maternal, 12 DPA, no treatment, cv Optic, EBma05
Hordeum vulgare subsp. vulgare cDNA clone
EBma05_SQ001_B11 5', mRNA sequence
Length = 390
Score = 49.6 bits (102), Expect = 6e-005
Identities = 23/58 (39%), Positives = 31/58 (53%)
Frame = +1 / +1
Query: 382 GVRSGGTVMLLLPNSVEFALAFLACSRLGAAATTANPLHTPPEIAKQAAASGATVVIT 555
G+R G TV L PN+VE + FLA R A NP +T E + SGA +++T
Sbjct: 187 GLRPGQTVALCFPNTVELVVMFLAVIRARGVAAPLNPAYTQEEFEFYLSDSGARLLVT 360
>gb|BM099042.2|BM099042 EBpi05_SQ002_M14_R pistil, 8 DPA, no treatment, cv Optic, EBpi05
Hordeum vulgare subsp. vulgare cDNA clone
EBpi05_SQ002_M14 5', mRNA sequence
Length = 567
Score = 35.9 bits (72), Expect(3) = 6e-005
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +1 / +3
Query: 1411 EGWLHTGDIGYVDDGDEIFIVDRLKELIK 1497
+GW HTGDIG + I+DR K + K
Sbjct: 318 DGWFHTGDIGEWQPDGSMKIIDRKKNIFK 404
Score = 29.9 bits (59), Expect(3) = 6e-005
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1 / +3
Query: 1330 GEICIRGKQLMKGYLNNPEATAKTI 1404
GEICI+G+ L GY + T + +
Sbjct: 240 GEICIKGETLFSGYYRREDLTEEVL 314
Score = 23.5 bits (45), Expect(3) = 6e-005
Identities = 7/18 (38%), Positives = 14/18 (77%)
Frame = +1 / +3
Query: 1084 MVISGAAPMGKELQDLLR 1137
+++SGAAP+ +++ LR
Sbjct: 3 VILSGAAPLATHVEEYLR 56
>gb|BU987989.1|BU987989 HF16F15r HF Hordeum vulgare subsp. vulgare cDNA clone HF16F15
5-PRIME, mRNA sequence
Length = 561
Score = 36.3 bits (73), Expect(2) = 1e-004
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +1 / +3
Query: 1384 EATAKTIDSEGWLHTGDIGYVDDGDEIFIVDRLKELIK 1497
E K + +GW HTGDIG + I+DR K + K
Sbjct: 156 EDLTKEVLVDGWFHTGDIGEWQYDGSMKIIDRKKNIFK 269
Score = 30.4 bits (60), Expect(2) = 1e-004
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +1 / +3
Query: 1330 GEICIRGKQLMKGYLNNPEATAKTI 1404
GEICIRG L GY + T + +
Sbjct: 105 GEICIRGDTLFSGYYKREDLTKEVL 179
>gb|AL509660.1|AL509660 AL509660 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY02H22u 3',
mRNA sequence
Length = 525
Score = 41.4 bits (84), Expect(2) = 1e-004
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +1 / -2
Query: 1504 GFQVAPAELEAMLIAHPSIVDAAVVQMKDDSCGEIPVAFVVASGG 1638
G ++ E+E + HP++++A+VV D+ GE P AFV G
Sbjct: 494 GENISSLEVEKAVYMHPAVLEASVVARXDEQWGESPCAFVTLKDG 360
Score = 24.9 bits (48), Expect(2) = 1e-004
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +1 / -2
Query: 1729 IPKAPSGKILRKDLRAK 1779
+PK +GKI + +LRAK
Sbjct: 257 LPKTATGKIKKHELRAK 207
>gb|AV916540.1|AV916540 AV916540 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags17k14 5', mRNA sequence
Length = 647
Score = 35.9 bits (72), Expect(2) = 2e-004
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +1 / +3
Query: 1411 EGWLHTGDIGYVDDGDEIFIVDRLKELIK 1497
+GW HTGDIG + I+DR K + K
Sbjct: 282 DGWFHTGDIGEWQPDGSMKIIDRKKNIFK 368
Score = 29.9 bits (59), Expect(2) = 2e-004
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1 / +3
Query: 1330 GEICIRGKQLMKGYLNNPEATAKTI 1404
GEICI+G+ L GY + T + +
Sbjct: 204 GEICIKGETLFSGYYRREDLTEEVL 278
>gb|AV914001.1|AV914001 AV914001 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags4b14 5', mRNA sequence
Length = 587
Score = 35.9 bits (72), Expect(2) = 2e-004
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +1 / +3
Query: 1411 EGWLHTGDIGYVDDGDEIFIVDRLKELIK 1497
+GW HTGDIG + I+DR K + K
Sbjct: 282 DGWFHTGDIGEWQPDGSMKIIDRKKNIFK 368
Score = 29.9 bits (59), Expect(2) = 2e-004
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1 / +3
Query: 1330 GEICIRGKQLMKGYLNNPEATAKTI 1404
GEICI+G+ L GY + T + +
Sbjct: 204 GEICIKGETLFSGYYRREDLTEEVL 278
>gb|AV910162.1|AV910162 AV910162 K. Sato unpublished cDNA library, cv. Akashinriki vegetative
stage leaves Hordeum vulgare subsp. vulgare cDNA clone
baak3g15 5', mRNA sequence
Length = 556
Score = 35.9 bits (72), Expect(2) = 2e-004
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +1 / +2
Query: 1411 EGWLHTGDIGYVDDGDEIFIVDRLKELIK 1497
+GW HTGDIG + I+DR K + K
Sbjct: 242 DGWFHTGDIGEWQPDGSMKIIDRKKNIFK 328
Score = 29.9 bits (59), Expect(2) = 2e-004
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1 / +2
Query: 1330 GEICIRGKQLMKGYLNNPEATAKTI 1404
GEICI+G+ L GY + T + +
Sbjct: 164 GEICIKGETLFSGYYRREDLTEEVL 238
>gb|BJ472972.1|BJ472972 BJ472972 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal40c06 5', mRNA sequence
Length = 452
Score = 41.4 bits (84), Expect(2) = 2e-004
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = +1 / +2
Query: 736 YSSGTTGLPKGVMLSHRGLVTSVA 807
Y+SGTTG PKG +LSH L+ +VA
Sbjct: 281 YTSGTTGTPKGAVLSHENLIANVA 352
Score = 24.4 bits (47), Expect(2) = 2e-004
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = +1 / +2
Query: 814 VDGDNPNLHFREDDVVLCVLPMFHVY 891
V G + + F DV + LP+ H+Y
Sbjct: 347 VAGSSLGVKFYPSDVYISYLPLAHIY 424
>gb|BQ663035.1|BQ663035 HT01G04w HT Hordeum vulgare subsp. vulgare cDNA clone HT01G04
3-PRIME, mRNA sequence
Length = 672
Score = 47.8 bits (98), Expect = 2e-004
Identities = 22/70 (31%), Positives = 39/70 (55%)
Frame = +1 / -3
Query: 1465 FIVDRLKELIKYKGFQVAPAELEAMLIAHPSIVDAAVVQMKDDSCGEIPVAFVVASGGSG 1644
+I R+ +++ G +++ AE+EA LI H + +AAVV + D+ G+ AFV G+
Sbjct: 670 WIRGRVDDVVNVSGHRLSTAEIEAALIEHHQVAEAAVVGINDELTGQAVNAFVALKDGTE 491
Query: 1645 ITEDEIKQYV 1674
++ K V
Sbjct: 490 SSDQVKKDLV 461
>gb|BE214775.3|BE214775 HV_CEb0004I22f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0004I22f, mRNA sequence
Length = 627
Score = 27.6 bits (54), Expect(3) = 3e-004
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = -3 / +3
Query: 1315 GGTARSPGR*SLARHSSPPCRRHRTSPVTAPWQ 1217
G TA +P R P R +++PVTA W+
Sbjct: 126 GSTAATPTSTRPMRRRLGPTARRQSAPVTAAWR 224
Score = 27.2 bits (53), Expect(3) = 3e-004
Identities = 12/34 (35%), Positives = 15/34 (44%)
Frame = -2 / +3
Query: 1169 PCPSTARGSLARSRSCSSLPMGAAPEMTMRTDER 1068
P RGS R+R CS+ P T+R R
Sbjct: 270 PTSCPRRGSCTRTRCCSTTTPPTTPSGTLRPTRR 371
Score = 26.7 bits (52), Expect(3) = 3e-004
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -1 / +1
Query: 1029 RDGQHERHDRDAVP 988
+DGQH DRDA P
Sbjct: 403 QDGQHRSQDRDAXP 444
>gb|CA028481.1|CA028481 HZ62C03r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ62C03
5-PRIME, mRNA sequence
Length = 495
Score = 47.3 bits (97), Expect = 3e-004
Identities = 18/32 (56%), Positives = 26/32 (81%)
Frame = +1 / +2
Query: 1675 AKQVVFYKRLHKIFFVEAIPKAPSGKILRKDL 1770
AK V YK++ ++ FV AIPK+P+GKILR++L
Sbjct: 11 AKHVAPYKKVRRVAFVAAIPKSPAGKILRREL 106
>gb|BM442982.2|BM442982 EBro02_SQ002_B12_R root, 3 week, hydroponic grown, low nitrogen, cv
Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone
EBro02_SQ002_B12 5', mRNA sequence
Length = 240
Score = 32.7 bits (65), Expect(2) = 4e-004
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +1 / +2
Query: 841 FREDDVVLCVLPMFHVYSLHSILLCGMRAGA 933
F E D + LP+FHV+ L LL + +GA
Sbjct: 146 FVETDATVVTLPLFHVHGLMCALLSSLASGA 238
Score = 32.2 bits (64), Expect(2) = 4e-004
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +1 / +2
Query: 736 YSSGTTGLPKGVMLSHRGLVTSVAQL 813
++SGTT PKGV L+ R L SV +
Sbjct: 53 HTSGTTSRPKGVPLTQRNLAASVQNI 130
>gb|BF065954.2|BF065954 HV_CEb0014H05f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0014H05f, mRNA sequence
Length = 804
Score = 27.6 bits (54), Expect(3) = 5e-004
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = -3 / +1
Query: 1315 GGTARSPGR*SLARHSSPPCRRHRTSPVTAPWQ 1217
G TA +P R P R +++PVTA W+
Sbjct: 295 GSTAATPTSTRPMRRRLGPTARRQSAPVTAAWR 393
Score = 27.2 bits (53), Expect(3) = 5e-004
Identities = 12/34 (35%), Positives = 15/34 (44%)
Frame = -2 / +1
Query: 1169 PCPSTARGSLARSRSCSSLPMGAAPEMTMRTDER 1068
P RGS R+R CS+ P T+R R
Sbjct: 439 PTSCPRRGSCTRTRCCSTTTPPTTPSGTLRPTRR 540
Score = 25.8 bits (50), Expect(3) = 5e-004
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -1 / +2
Query: 1029 RDGQHERHDRDAVP 988
+DGQH DRDA P
Sbjct: 572 QDGQHRSQDRDAGP 613
>gb|BF065930.2|BF065930 HV_CEb0014G05f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0014G05f, mRNA sequence
Length = 803
Score = 27.6 bits (54), Expect(3) = 5e-004
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = -3 / +1
Query: 1315 GGTARSPGR*SLARHSSPPCRRHRTSPVTAPWQ 1217
G TA +P R P R +++PVTA W+
Sbjct: 295 GSTAATPTSTRPMRRRLGPTARRQSAPVTAAWR 393
Score = 27.2 bits (53), Expect(3) = 5e-004
Identities = 12/34 (35%), Positives = 15/34 (44%)
Frame = -2 / +1
Query: 1169 PCPSTARGSLARSRSCSSLPMGAAPEMTMRTDER 1068
P RGS R+R CS+ P T+R R
Sbjct: 439 PTSCPRRGSCTRTRCCSTTTPPTTPSGTLRPTRR 540
Score = 25.8 bits (50), Expect(3) = 5e-004
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -1 / +2
Query: 1029 RDGQHERHDRDAVP 988
+DGQH DRDA P
Sbjct: 572 QDGQHRSQDRDAGP 613
>gb|BI959359.1|BI959359 HVSMEn0019F21f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0019F21f,
mRNA sequence
Length = 648
Score = 27.6 bits (54), Expect(3) = 5e-004
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = -3 / +1
Query: 1315 GGTARSPGR*SLARHSSPPCRRHRTSPVTAPWQ 1217
G TA +P R P R +++PVTA W+
Sbjct: 256 GSTAATPTSTRPMRRRLGPTARRQSAPVTAAWR 354
Score = 27.2 bits (53), Expect(3) = 5e-004
Identities = 12/34 (35%), Positives = 15/34 (44%)
Frame = -2 / +1
Query: 1169 PCPSTARGSLARSRSCSSLPMGAAPEMTMRTDER 1068
P RGS R+R CS+ P T+R R
Sbjct: 400 PTSCPRRGSCTRTRCCSTTTPPTTPSGTLRPTRR 501
Score = 25.8 bits (50), Expect(3) = 5e-004
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -1 / +2
Query: 1029 RDGQHERHDRDAVP 988
+DGQH DRDA P
Sbjct: 533 QDGQHRSQDRDAGP 574
>gb|BQ768830.1|BQ768830 EBro08_SQ012_E21_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ012_E21 5', mRNA sequence
Length = 724
Score = 41.4 bits (84), Expect(2) = 9e-004
Identities = 14/24 (58%), Positives = 21/24 (87%)
Frame = +1 / +1
Query: 736 YSSGTTGLPKGVMLSHRGLVTSVA 807
Y+SG+TGLPKGVM++H +V ++A
Sbjct: 430 YTSGSTGLPKGVMITHGNMVATIA 501
Score = 22.1 bits (42), Expect(2) = 9e-004
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +1 / +1
Query: 853 DVVLCVLPMFHVYSL 897
DV L LP+ HV+ L
Sbjct: 538 DVYLAYLPLAHVFEL 582
>gb|BU978274.1|BU978274 HA12N19r HA Hordeum vulgare subsp. vulgare cDNA clone HA12N19
5-PRIME, mRNA sequence
Length = 457
Score = 36.8 bits (74), Expect(2) = 0.001
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = +1 / +3
Query: 736 YSSGTTGLPKGVMLSHRGLVTSVA 807
YSSGTTG K V+L+HR L+T+ A
Sbjct: 123 YSSGTTGSAKAVVLTHRNLMTTRA 194
Score = 26.7 bits (52), Expect(2) = 0.001
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = +1 / +3
Query: 850 DDVVLCVLPMFHVY 891
D+VV+ +P+FHVY
Sbjct: 216 DEVVMLTVPLFHVY 257
>gb|BJ472368.1|BJ472368 BJ472368 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal33p20 5', mRNA sequence
Length = 644
Score = 44.6 bits (91), Expect(2) = 0.001
Identities = 19/50 (38%), Positives = 26/50 (52%)
Frame = +1 / +1
Query: 1330 GEICIRGKQLMKGYLNNPEATAKTIDSEGWLHTGDIGYVDDGDEIFIVDR 1479
GE+CI+ L K Y PE TA++ G+ TGD VD+ I+ R
Sbjct: 475 GELCIKSPSLFKEYWKRPEVTAESFIDGGFFKTGDTVTVDEDGYFIILGR 624
Score = 33.1 bits (66), Expect = 5.3
Identities = 20/57 (35%), Positives = 28/57 (49%)
Frame = -2 / -1
Query: 1499 YLMSSLSRSTMKISSPSSTYPMSPVCSHPSESMVFAVASGLLRYPFINCLPLMQISP 1329
++MS+ R + SST +SPV +P AV SGL +Y L+Q SP
Sbjct: 644 FMMSAFVRPKIIKYPSSSTVTVSPVLKNPPSINDSAVTSGLFQYSLKRDGLLIQSSP 474
Score = 22.1 bits (42), Expect(2) = 0.001
Identities = 7/20 (35%), Positives = 15/20 (75%)
Frame = +1 / +1
Query: 943 IMKRFDTLRMFELVKRHGIT 1002
+MKR++ + L++R+G+T
Sbjct: 289 LMKRWEEVTCHRLLERYGMT 348
>gb|BJ471298.1|BJ471298 BJ471298 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal17l05 5', mRNA sequence
Length = 647
Score = 44.6 bits (91), Expect(2) = 0.001
Identities = 19/50 (38%), Positives = 26/50 (52%)
Frame = +1 / +3
Query: 1330 GEICIRGKQLMKGYLNNPEATAKTIDSEGWLHTGDIGYVDDGDEIFIVDR 1479
GE+CI+ L K Y PE TA++ G+ TGD VD+ I+ R
Sbjct: 465 GELCIKSPSLFKEYWKRPEVTAESFIDGGFFKTGDTVTVDEDGYFIILGR 614
Score = 35.9 bits (72), Expect = 0.79
Identities = 21/59 (35%), Positives = 29/59 (49%)
Frame = -2 / -2
Query: 1505 PLYLMSSLSRSTMKISSPSSTYPMSPVCSHPSESMVFAVASGLLRYPFINCLPLMQISP 1329
P ++MS+ R + SST +SPV +P AV SGL +Y L+Q SP
Sbjct: 640 PTFMMSAFVRPKIIKYPSSSTVTVSPVLKNPPSINDSAVTSGLFQYSLKRDGLLIQSSP 464
Score = 22.1 bits (42), Expect(2) = 0.001
Identities = 7/20 (35%), Positives = 15/20 (75%)
Frame = +1 / +3
Query: 943 IMKRFDTLRMFELVKRHGIT 1002
+MKR++ + L++R+G+T
Sbjct: 279 LMKRWEEVTCHRLLERYGMT 338
>gb|AV932377.1|AV932377 AV932377 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal3g01 5', mRNA sequence
Length = 685
Score = 44.6 bits (91), Expect(2) = 0.001
Identities = 19/50 (38%), Positives = 26/50 (52%)
Frame = +1 / +1
Query: 1330 GEICIRGKQLMKGYLNNPEATAKTIDSEGWLHTGDIGYVDDGDEIFIVDR 1479
GE+CI+ L K Y PE TA++ G+ TGD VD+ I+ R
Sbjct: 478 GELCIKSPSLFKEYWKRPEVTAESFIDGGFFKTGDTVTVDEDGYFIILGR 627
Score = 35.9 bits (72), Expect = 0.79
Identities = 21/59 (35%), Positives = 29/59 (49%)
Frame = -2 / -3
Query: 1505 PLYLMSSLSRSTMKISSPSSTYPMSPVCSHPSESMVFAVASGLLRYPFINCLPLMQISP 1329
P ++MS+ R + SST +SPV +P AV SGL +Y L+Q SP
Sbjct: 653 PTFMMSAFVRPKIIKYPSSSTVTVSPVLKNPPSINDSAVTSGLFQYSLKRDGLLIQSSP 477
Score = 22.1 bits (42), Expect(2) = 0.001
Identities = 7/20 (35%), Positives = 15/20 (75%)
Frame = +1 / +1
Query: 943 IMKRFDTLRMFELVKRHGIT 1002
+MKR++ + L++R+G+T
Sbjct: 292 LMKRWEEVTCHRLLERYGMT 351
>gb|BJ463929.1|BJ463929 BJ463929 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags31b16 5', mRNA sequence
Length = 435
Score = 35.9 bits (72), Expect(2) = 0.001
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +1 / +1
Query: 1411 EGWLHTGDIGYVDDGDEIFIVDRLKELIK 1497
+GW HTGDIG + I+DR K + K
Sbjct: 124 DGWFHTGDIGEWQPDGSMKIIDRKKNIFK 210
Score = 27.2 bits (53), Expect(2) = 0.001
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +1 / +1
Query: 1333 EICIRGKQLMKGYLNNPEATAKTI 1404
EICI+G+ L GY + T + +
Sbjct: 49 EICIKGETLFSGYYRREDLTEEVL 120
>gb|BM443022.2|BM443022 EBro02_SQ002_D13_R root, 3 week, hydroponic grown, low nitrogen, cv
Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone
EBro02_SQ002_D13 5', mRNA sequence
Length = 363
Score = 32.2 bits (64), Expect(2) = 0.001
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +1 / +2
Query: 736 YSSGTTGLPKGVMLSHRGLVTSVAQL 813
++SGTT PKGV L+ R L SV +
Sbjct: 53 HTSGTTSRPKGVPLTQRNLAASVQNI 130
Score = 30.9 bits (61), Expect(2) = 0.001
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +1 / +2
Query: 841 FREDDVVLCVLPMFHVYSLHSILLCGMRAG 930
F E D + LP+FHV+ L LL + +G
Sbjct: 146 FVETDATVVTLPLFHVHGLMCALLSSLASG 235
>gb|BI952907.1|BI952907 HVSMEm0008F07f Hordeum vulgare green seedling EST library
HVcDNA0014 (Blumeria infected) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEm0008F07f, mRNA sequence
Length = 934
Score = 44.6 bits (91), Expect = 0.002
Identities = 23/40 (57%), Positives = 25/40 (62%)
Frame = -2 / +3
Query: 470 APRREHARNASANSTEFGRSSITVPPLRTPRQARIPAATR 351
APRR HAR ASA +T RS+ T PP R R A PAA R
Sbjct: 741 APRRRHARAASAPATPPRRSAPTFPPRRPTRGAVRPAALR 860
>gb|AV935233.1|AV935233 AV935233 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal3g01 3', mRNA sequence
Length = 727
Score = 44.6 bits (91), Expect = 0.002
Identities = 19/50 (38%), Positives = 26/50 (52%)
Frame = +1 / -1
Query: 1330 GEICIRGKQLMKGYLNNPEATAKTIDSEGWLHTGDIGYVDDGDEIFIVDR 1479
GE+CI+ L K Y PE TA++ G+ TGD VD+ I+ R
Sbjct: 619 GELCIKSPSLFKEYWKRPEVTAESFIDGGFFKTGDTVTVDEDGYFIILGR 470
Score = 35.9 bits (72), Expect = 0.79
Identities = 21/59 (35%), Positives = 29/59 (49%)
Frame = -2 / +3
Query: 1505 PLYLMSSLSRSTMKISSPSSTYPMSPVCSHPSESMVFAVASGLLRYPFINCLPLMQISP 1329
P ++MS+ R + SST +SPV +P AV SGL +Y L+Q SP
Sbjct: 444 PTFMMSAFVRPKIIKYPSSSTVTVSPVLKNPPSINDSAVTSGLFQYSLKRDGLLIQSSP 620
>gb|BJ475483.1|BJ475483 BJ475483 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal25o01 3', mRNA sequence
Length = 584
Score = 44.6 bits (91), Expect = 0.002
Identities = 19/50 (38%), Positives = 26/50 (52%)
Frame = +1 / -1
Query: 1330 GEICIRGKQLMKGYLNNPEATAKTIDSEGWLHTGDIGYVDDGDEIFIVDR 1479
GE+CI+ L K Y PE TA++ G+ TGD VD+ I+ R
Sbjct: 536 GELCIKSPSLFKEYWKRPEVTAESFIDGGFFKTGDTVTVDEDGYFIILGR 387
Score = 35.9 bits (72), Expect = 0.79
Identities = 21/59 (35%), Positives = 29/59 (49%)
Frame = -2 / +1
Query: 1505 PLYLMSSLSRSTMKISSPSSTYPMSPVCSHPSESMVFAVASGLLRYPFINCLPLMQISP 1329
P ++MS+ R + SST +SPV +P AV SGL +Y L+Q SP
Sbjct: 361 PTFMMSAFVRPKIIKYPSSSTVTVSPVLKNPPSINDSAVTSGLFQYSLKRDGLLIQSSP 537
>gb|BJ476363.1|BJ476363 BJ476363 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal33p20 3', mRNA sequence
Length = 725
Score = 44.6 bits (91), Expect = 0.002
Identities = 19/50 (38%), Positives = 26/50 (52%)
Frame = +1 / -2
Query: 1330 GEICIRGKQLMKGYLNNPEATAKTIDSEGWLHTGDIGYVDDGDEIFIVDR 1479
GE+CI+ L K Y PE TA++ G+ TGD VD+ I+ R
Sbjct: 616 GELCIKSPSLFKEYWKRPEVTAESFIDGGFFKTGDTVTVDEDGYFIILGR 467
Score = 35.9 bits (72), Expect = 0.79
Identities = 21/59 (35%), Positives = 29/59 (49%)
Frame = -2 / +3
Query: 1505 PLYLMSSLSRSTMKISSPSSTYPMSPVCSHPSESMVFAVASGLLRYPFINCLPLMQISP 1329
P ++MS+ R + SST +SPV +P AV SGL +Y L+Q SP
Sbjct: 441 PTFMMSAFVRPKIIKYPSSSTVTVSPVLKNPPSINDSAVTSGLFQYSLKRDGLLIQSSP 617
>gb|BJ477302.1|BJ477302 BJ477302 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal16p19 3', mRNA sequence
Length = 652
Score = 44.6 bits (91), Expect = 0.002
Identities = 19/50 (38%), Positives = 26/50 (52%)
Frame = +1 / -3
Query: 1330 GEICIRGKQLMKGYLNNPEATAKTIDSEGWLHTGDIGYVDDGDEIFIVDR 1479
GE+CI+ L K Y PE TA++ G+ TGD VD+ I+ R
Sbjct: 605 GELCIKSPSLFKEYWKRPEVTAESFIDGGFFKTGDTVTVDEDGYFIILGR 456
Score = 35.9 bits (72), Expect = 0.79
Identities = 21/59 (35%), Positives = 29/59 (49%)
Frame = -2 / +1
Query: 1505 PLYLMSSLSRSTMKISSPSSTYPMSPVCSHPSESMVFAVASGLLRYPFINCLPLMQISP 1329
P ++MS+ R + SST +SPV +P AV SGL +Y L+Q SP
Sbjct: 430 PTFMMSAFVRPKIIKYPSSSTVTVSPVLKNPPSINDSAVTSGLFQYSLKRDGLLIQSSP 606
>gb|BQ657921.1|BQ657921 HA06G23u HA Hordeum vulgare subsp. vulgare cDNA clone HA06G23
3-PRIME, mRNA sequence
Length = 618
Score = 44.6 bits (91), Expect = 0.002
Identities = 19/50 (38%), Positives = 26/50 (52%)
Frame = +1 / -3
Query: 1330 GEICIRGKQLMKGYLNNPEATAKTIDSEGWLHTGDIGYVDDGDEIFIVDR 1479
GE+CI+ L K Y PE TA++ G+ TGD VD+ I+ R
Sbjct: 610 GELCIKSPSLFKEYWKRPEVTAESFIDGGFFKTGDTVTVDEDGYFIILGR 461
Score = 35.9 bits (72), Expect = 0.79
Identities = 21/59 (35%), Positives = 29/59 (49%)
Frame = -2 / +3
Query: 1505 PLYLMSSLSRSTMKISSPSSTYPMSPVCSHPSESMVFAVASGLLRYPFINCLPLMQISP 1329
P ++MS+ R + SST +SPV +P AV SGL +Y L+Q SP
Sbjct: 435 PTFMMSAFVRPKIIKYPSSSTVTVSPVLKNPPSINDSAVTSGLFQYSLKRDGLLIQSSP 611
>gb|BU971768.1|BU971768 HB19J23r BC Hordeum vulgare subsp. vulgare cDNA clone HB19J23
5-PRIME, mRNA sequence
Length = 647
Score = 44.6 bits (91), Expect = 0.002
Identities = 19/50 (38%), Positives = 26/50 (52%)
Frame = +1 / +3
Query: 1330 GEICIRGKQLMKGYLNNPEATAKTIDSEGWLHTGDIGYVDDGDEIFIVDR 1479
GE+CI+ L K Y PE TA++ G+ TGD VD+ I+ R
Sbjct: 120 GELCIKSPSLFKEYWKRPEVTAESFIDGGFFKTGDTVTVDEDGYFIILGR 269
Score = 35.9 bits (72), Expect = 0.79
Identities = 21/59 (35%), Positives = 29/59 (49%)
Frame = -2 / -2
Query: 1505 PLYLMSSLSRSTMKISSPSSTYPMSPVCSHPSESMVFAVASGLLRYPFINCLPLMQISP 1329
P ++MS+ R + SST +SPV +P AV SGL +Y L+Q SP
Sbjct: 295 PTFMMSAFVRPKIIKYPSSSTVTVSPVLKNPPSINDSAVTSGLFQYSLKRDGLLIQSSP 119
>gb|AL500161.1|AL500161 AL500161 Hordeum vulgare Barke etiolated leaves Hordeum vulgare
subsp. vulgare cDNA clone HK05C20r 3', mRNA sequence
Length = 683
Score = 40.5 bits (82), Expect(2) = 0.003
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = -3 / -3
Query: 1282 LARHSSPPCRRHRTSPVTAPWQTPCTSRAPGLP 1184
LA+ S+ P R R+ TAPW+ PC S +P P
Sbjct: 486 LAKLSAAPPPRRRSRSTTAPWRAPCASASPSRP 388
Score = 24.9 bits (48), Expect(2) = 0.003
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -2 / -3
Query: 1199 STGPASVIP*PCPSTARGSLARSRSC 1122
+ GPAS P P++A S SR+C
Sbjct: 150 TAGPASTRPCRRPTSATSSRRSSRAC 73
>gb|BI954852.1|BI954852 HVSMEm0020B01f Hordeum vulgare green seedling EST library HVcDNA0014
(Blumeria infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEm0020B01f, mRNA sequence
Length = 590
Score = 27.2 bits (53), Expect(3) = 0.009
Identities = 12/34 (35%), Positives = 15/34 (44%)
Frame = -2 / +1
Query: 1169 PCPSTARGSLARSRSCSSLPMGAAPEMTMRTDER 1068
P RGS R+R CS+ P T+R R
Sbjct: 106 PTSCPRRGSCTRTRCCSTTTPPTTPSGTLRPTRR 207
Score = 25.8 bits (50), Expect(3) = 0.009
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -1 / +2
Query: 1029 RDGQHERHDRDAVP 988
+DGQH DRDA P
Sbjct: 239 QDGQHRSQDRDAGP 280
Score = 23.1 bits (44), Expect(3) = 0.009
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = -3 / +1
Query: 1261 PCRRHRTSPVTAPWQ 1217
P R +++PVTA W+
Sbjct: 16 PTARRQSAPVTAAWR 60
>gb|BM373636.2|BM373636 EBma03_SQ002_D01_R maternal, 8 DPA, no treatment, cv Optic, EBma03
Hordeum vulgare subsp. vulgare cDNA clone
EBma03_SQ002_D01 5', mRNA sequence
Length = 276
Score = 41.8 bits (85), Expect = 0.013
Identities = 18/49 (36%), Positives = 25/49 (51%)
Frame = +1 / +3
Query: 1333 EICIRGKQLMKGYLNNPEATAKTIDSEGWLHTGDIGYVDDGDEIFIVDR 1479
E+CI+ L K Y PE TA++ G+ TGD VD+ I+ R
Sbjct: 3 ELCIKSPSLFKEYWKRPEVTAESFIDGGFFKTGDTVTVDEDGYFIILGR 149
Score = 33.6 bits (67), Expect = 3.9
Identities = 17/46 (36%), Positives = 24/46 (52%)
Frame = -2 / -3
Query: 1505 PLYLMSSLSRSTMKISSPSSTYPMSPVCSHPSESMVFAVASGLLRY 1368
P ++MS+ R + SST +SPV +P AV SGL +Y
Sbjct: 175 PTFMMSAFVRPKIIKYPSSSTVTVSPVLKNPPSINDSAVTSGLFQY 38
>gb|BU985792.1|BU985792 HF08K06r HF Hordeum vulgare subsp. vulgare cDNA clone HF08K06
5-PRIME, mRNA sequence
Length = 501
Score = 41.4 bits (84), Expect = 0.017
Identities = 14/24 (58%), Positives = 21/24 (87%)
Frame = +1 / +3
Query: 736 YSSGTTGLPKGVMLSHRGLVTSVA 807
Y+SG+TGLPKGVM++H +V ++A
Sbjct: 354 YTSGSTGLPKGVMITHGNMVATIA 425
>gb|BU995953.1|BU995953 HM11O07r HM Hordeum vulgare subsp. vulgare cDNA clone HM11O07
5-PRIME, mRNA sequence
Length = 550
Score = 41.4 bits (84), Expect = 0.017
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = +3 / +3
Query: 1287 HRPGDRAVPPPQPARGDLHQGQAVDERVPQQPGG 1388
H PG R P +P GD H G+A ER P GG
Sbjct: 219 HHPGARGAPATRPPGGDHHAGRARPERAPHHGGG 320
>gb|CV061636.1|CV061636 BNEL70b9 Barley EST endosperm library Hordeum vulgare subsp. vulgare
cDNA clone BNEL70b9 5' similar to P0503E05.4, mRNA
sequence
Length = 572
Score = 33.1 bits (66), Expect(2) = 0.019
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = -3 / -1
Query: 1441 TQCLRCAATPPSRWSSPLPPGC 1376
T C R PP+R S P PPGC
Sbjct: 554 TGCKRGTPCPPARGSCPAPPGC 489
Score = 25.8 bits (50), Expect(2) = 0.019
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = -3 / -1
Query: 1348 P*CKSPRAGCGGGTARSPGR*SLARHSSPPCRRHRT 1241
P PR+GCG A P R + +R RR R+
Sbjct: 428 PSAAPPRSGCGTPPAPPPRRRTPSRSPPRSTRRRRS 321
>gb|BJ463779.1|BJ463779 BJ463779 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags30h10 5', mRNA sequence
Length = 675
Score = 31.8 bits (63), Expect(3) = 0.024
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +1 / +2
Query: 1417 WLHTGDIGYVDDGDEIFIVDRLKELIK 1497
W +TGDIG + I+DR K+++K
Sbjct: 317 WFYTGDIGQFHPDGCVEIIDRKKDIVK 397
Score = 26.3 bits (51), Expect(3) = 0.024
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +1 / +2
Query: 1330 GEICIRGKQLMKGYLNNPEAT 1392
GE+ + G + KGY NN T
Sbjct: 218 GEVVVGGYSITKGYFNNEAKT 280
Score = 22.6 bits (43), Expect(3) = 0.024
Identities = 7/9 (77%), Positives = 9/9 (100%)
Frame = +1 / +2
Query: 1159 LGQGYGMTE 1185
+GQGYG+TE
Sbjct: 53 VGQGYGLTE 79
>gb|BI778919.2|BI778919 EBro01_SQ002_A21_R root, 3 week, hydroponic grown, no treatment, cv
Optic, EBro01 Hordeum vulgare subsp. vulgare cDNA clone
EBro01_SQ002_A21 5', mRNA sequence
Length = 426
Score = 40.9 bits (83), Expect = 0.024
Identities = 20/53 (37%), Positives = 22/53 (41%)
Frame = -1 / +1
Query: 1071 EVVAVDGVALDHLHRDGQHERHDRDAVPLHQLEHAESVEALHDHERRAGAHPA 913
E AV G L HR G H R D P+ SV + DHE GA A
Sbjct: 1 EAAAVPGAKLQQDHRQGTHARRDHQLRPVAAASGRVSVHEIVDHESSVGARRA 159
>gb|BQ762573.1|BQ762573 EBro02_SQ004_G12_R root, 3 week, hydroponic grown, low nitrogen, cv
Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone
EBro02_SQ004_G12 5', mRNA sequence
Length = 659
Score = 40.5 bits (82), Expect = 0.033
Identities = 19/57 (33%), Positives = 24/57 (42%)
Frame = -3 / +2
Query: 1336 SPRAGCGGGTARSPGR*SLARHSSPPCRRHRTSPVTAPWQTPCTSRAPGLPLSSHNP 1166
SP CG S G + A +S P R R A W++ C R PG S +P
Sbjct: 323 SPTRSCGRRPTTSTGATTSAEAASAPSTRARCGTAAATWRSKCCPRTPGRAPRSSSP 493
>gb|BI958869.1|BI958869 HVSMEn0016P06f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0016P06f,
mRNA sequence
Length = 622
Score = 29.9 bits (59), Expect(2) = 0.034
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = -3 / -1
Query: 1426 CAATPPSRWSSPLPP 1382
CA++PP R S PLPP
Sbjct: 391 CASSPPRRASXPLPP 347
Score = 28.1 bits (55), Expect(2) = 0.034
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -3 / -1
Query: 1270 SSPPCRRHRTSPVTAPWQTPCTSRAPGLP 1184
++PP RR +P AP P R+P P
Sbjct: 235 AAPPTRRRPRTPAPAPRPPPARVRSPRSP 149
>gb|AV925980.1|AV925980 AV925980 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp. vulgare
cDNA clone basdj17 5', mRNA sequence
Length = 508
Score = 30.9 bits (61), Expect(2) = 0.035
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +1 / +1
Query: 1540 LIAHPSIVDAAVVQMKDDSCGEIPVAFVVASGGSGITEDEIKQYVAK 1680
L++HP +AAVV ++ + G+ AFV G +E+ K + K
Sbjct: 4 LVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVDGVPYSEELRKSLITK 144
Score = 27.2 bits (53), Expect(2) = 0.035
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +1 / +1
Query: 1672 VAKQVVFYKRLHKIFFVEAIPKAPSGKILRKDLR 1773
V Q+ + +I + +PK SGKI+R+ LR
Sbjct: 145 VRTQIGAFAAPDRIHWAPGLPKTRSGKIMRRILR 246
>gb|BG418549.2|BG418549 HVSMEk0023B10f Hordeum vulgare testa/pericarp EST library HVcDNA0013
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEk0023B10f, mRNA sequence
Length = 802
Score = 30.4 bits (60), Expect(2) = 0.046
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = +1 / +3
Query: 1426 TGDIGYVDDGDEIFIVDRLKELIKYKGFQVAPAELEAMLIAHPSIVDAAV 1575
TGD E+ + R +K G + + E+E+ L HP + DAAV
Sbjct: 108 TGDYARRLKAGELVFLGRKDRTVKIYGQRFSL*EIESTLKEHPDVSDAAV 257
Score = 27.2 bits (53), Expect(2) = 0.046
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +1 / +3
Query: 1330 GEICIRGKQLMKGYLNNPEATAKTIDSEG 1416
GEIC+ G L GYL + T SEG
Sbjct: 6 GEICVSGACLFNGYLAEFLRSNHTEGSEG 92
>gb|BE060773.3|BE060773 HVSMEg0013F05f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0013F05f, mRNA sequence
Length = 697
Score = 38.6 bits (78), Expect(2) = 0.047
Identities = 16/29 (55%), Positives = 19/29 (65%)
Frame = +1 / +1
Query: 730 LPYSSGTTGLPKGVMLSHRGLVTSVAQLV 816
L Y+SGTT PKGV+ SHRG S L+
Sbjct: 283 LNYTSGTTSAPKGVVYSHRGAYLSTVGLL 369
Score = 29.5 bits (58), Expect(2) = 1.7
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -2 / -3
Query: 929 PARIPHSRMECSEYTWNMGSTQRTTSS 849
P R P ++ WNMGS QR T S
Sbjct: 470 PPRAPMPHVKVQPLQWNMGSDQR*TGS 390
Score = 22.6 bits (43), Expect(2) = 0.047
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = +2 / +2
Query: 1094 RGPRPWARSCR 1126
RGP PW+R R
Sbjct: 494 RGPTPWSRDHR 526
Score = 22.6 bits (43), Expect(2) = 1.7
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -2 / -3
Query: 791 SPRCDSITPLGSPVVPD 741
+PR TPLG+ VVP+
Sbjct: 344 APRWLYTTPLGADVVPE 294
>gb|AV832773.1|AV832773 AV832773 K. Sato unpublished cDNA library: Hordeum vulgare subsp.
vulgare top three leaves adult, heading stage Hordeum
vulgare subsp. vulgare cDNA clone baal4g09, mRNA
sequence
Length = 642
Score = 34.5 bits (69), Expect(2) = 0.059
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = +1 / +1
Query: 736 YSSGTTGLPKGVMLSHRGLV 795
++SGTTG PKGV +SH L+
Sbjct: 517 FTSGTTGQPKGVAISHTSLI 576
Score = 26.3 bits (51), Expect(2) = 0.059
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +1 / +1
Query: 382 GVRSGGTVMLLLPNSVEFALAFLACSRLGAAATTAN 489
GVR G V ++ NS+E+ LA +GA N
Sbjct: 142 GVRPGDVVAVVGFNSIEYMELLLAVPYIGAIVAPLN 249
>gb|BJ469195.1|BJ469195 BJ469195 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal13j23 5', mRNA sequence
Length = 651
Score = 34.5 bits (69), Expect(2) = 0.059
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = +1 / +1
Query: 736 YSSGTTGLPKGVMLSHRGLV 795
++SGTTG PKGV +SH L+
Sbjct: 517 FTSGTTGQPKGVAISHTSLI 576
Score = 26.3 bits (51), Expect(2) = 0.059
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +1 / +1
Query: 382 GVRSGGTVMLLLPNSVEFALAFLACSRLGAAATTAN 489
GVR G V ++ NS+E+ LA +GA N
Sbjct: 142 GVRPGDVVAVVGFNSIEYMELLLAVPYIGAIVAPLN 249
>gb|BF630427.2|BF630427 HVSMEb0009F10f Hordeum vulgare seedling shoot EST library HVcDNA0002
(Dehydration stress) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEb0009F10f, mRNA sequence
Length = 725
Score = 35.9 bits (72), Expect(2) = 0.066
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -3 / +3
Query: 1270 SSPPCRRHRTSPVTAPWQTPCTSRAPGLP 1184
++ P R R+ TAPW+ PC S +P P
Sbjct: 69 AAAPPPRRRSRSTTAPWRAPCASASPSRP 155
Score = 24.9 bits (48), Expect(2) = 0.066
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -2 / +3
Query: 1199 STGPASVIP*PCPSTARGSLARSRSC 1122
+ GPAS P P++A S SR+C
Sbjct: 393 TAGPASTRPCRRPTSATSSRRSSRAC 470
>gb|AV833459.1|AV833459 AV833459 K. Sato unpublished cDNA library: Hordeum vulgare subsp.
vulgare shoots germination Hordeum vulgare subsp.
vulgare cDNA clone bags9h15, mRNA sequence
Length = 631
Score = 39.1 bits (79), Expect = 0.086
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = +1 / +1
Query: 736 YSSGTTGLPKGVMLSHRGLVTSVA 807
Y+SGTTG PKG +LSH + +VA
Sbjct: 556 YTSGTTGTPKGAVLSHANFIANVA 627
>gb|AV915470.1|AV915470 AV915470 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags14j20 5', mRNA sequence
Length = 615
Score = 39.1 bits (79), Expect = 0.086
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = +1 / +3
Query: 1411 EGWLHTGDIGYVDDGDEIFIVDRLKELIKYKGFQVAPAELEAMLIAHPSIVD 1566
+GW HTGDIG + + ++DR K + K + E + P I++
Sbjct: 63 DGWFHTGDIGEMTPDGILKVIDRKKNIFKLSQGEYVAVEYLEKVYVFPPIIE 218
>gb|AV917795.1|AV917795 AV917795 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags11i19 3', mRNA sequence
Length = 657
Score = 39.1 bits (79), Expect = 0.086
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = +1 / -3
Query: 1411 EGWLHTGDIGYVDDGDEIFIVDRLKELIKYKGFQVAPAELEAMLIAHPSIVD 1566
+GW HTGDIG + + ++DR K + K + E + P I++
Sbjct: 616 DGWFHTGDIGEMTPDGILKVIDRKKNIFKLSQGEYVAVEYLEKVYVFPPIIE 461
>gb|AV920565.1|AV920565 AV920565 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags14j20 3', mRNA sequence
Length = 666
Score = 39.1 bits (79), Expect = 0.086
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = +1 / -2
Query: 1411 EGWLHTGDIGYVDDGDEIFIVDRLKELIKYKGFQVAPAELEAMLIAHPSIVD 1566
+GW HTGDIG + + ++DR K + K + E + P I++
Sbjct: 614 DGWFHTGDIGEMTPDGILKVIDRKKNIFKLSQGEYVAVEYLEKVYVFPPIIE 459
>gb|BJ462667.1|BJ462667 BJ462667 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags29m08 5', mRNA sequence
Length = 628
Score = 39.1 bits (79), Expect = 0.086
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = +1 / +1
Query: 1411 EGWLHTGDIGYVDDGDEIFIVDRLKELIKYKGFQVAPAELEAMLIAHPSIVD 1566
+GW HTGDIG + + ++DR K + K + E + P I++
Sbjct: 52 DGWFHTGDIGEMTPDGILKVIDRKKNIFKLSQGEYVAVEYLEKVYVFPPIIE 207
>gb|BJ462771.1|BJ462771 BJ462771 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags24e24 5', mRNA sequence
Length = 645
Score = 39.1 bits (79), Expect = 0.086
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = +1 / +3
Query: 736 YSSGTTGLPKGVMLSHRGLVTSVA 807
Y+SGTTG PKG +LSH + +VA
Sbjct: 555 YTSGTTGTPKGAVLSHANFIANVA 626
>gb|BJ467957.1|BJ467957 BJ467957 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags30h13 3', mRNA sequence
Length = 636
Score = 39.1 bits (79), Expect = 0.086
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = +1 / -2
Query: 1411 EGWLHTGDIGYVDDGDEIFIVDRLKELIKYKGFQVAPAELEAMLIAHPSIVD 1566
+GW HTGDIG + + ++DR K + K + E + P I++
Sbjct: 608 DGWFHTGDIGEMTPDGILKVIDRKKNIFKLSQGEYVAVEYLEKVYVFPPIIE 453
>gb|CV062288.1|CV062288 BNEL78d2 Barley EST endosperm library Hordeum vulgare subsp. vulgare
cDNA clone BNEL78d2 5' similar to ELONGATION FACTOR
1-ALPHA, mRNA sequence
Length = 776
Score = 30.9 bits (61), Expect(2) = 0.095
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = -3 / -2
Query: 1540 AWPRAPPERLGTPC 1499
+WP++P ER+G PC
Sbjct: 748 SWPKSPQERVGAPC 707
Score = 29.5 bits (58), Expect(2) = 0.095
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -2 / -2
Query: 1064 WRSMASLLTISTAMGSTSGTIVMPCLFTSSNMRRVSKRF 948
W S ++T T T GT+V C SS +R+ RF
Sbjct: 688 WTSSIMVVTPQTQRMGTKGTLVRVCSRPSSGRKRLP*RF 572
>gb|BM816889.1|BM816889 HC04A02_T3.ab1 HC Hordeum vulgare subsp. vulgare cDNA clone
HC04A02_T3.ab1 similar to (AC067754) blue copper protein,
putative; 52232-53038 [Arabidopsis thaliana], mRNA
sequence
Length = 817
Score = 32.7 bits (65), Expect(3) = 0.11
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = -3 / +2
Query: 1423 AATPPSRWSSPLPPGC*GTLSSTACP*CKSPRAGC 1319
AA+P R +S PPG TLS +A C + GC
Sbjct: 167 AASPAGRSASTTPPGPAATLSKSATVSCSTTPRGC 271
Score = 24.0 bits (46), Expect(3) = 0.11
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = -3 / +1
Query: 1243 TSPVTAPWQTPCTSRAPG 1190
T+P T P CT PG
Sbjct: 571 TTPYTTPTSPACTGTTPG 624
Score = 22.1 bits (42), Expect(3) = 0.11
Identities = 5/14 (35%), Positives = 7/14 (50%)
Frame = -2 / +3
Query: 65 WSWTWIGAMCKDGC 24
W W ++ C GC
Sbjct: 702 WRWPYVALGCARGC 743
>gb|AV918894.1|AV918894 AV918894 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags22k01 3', mRNA sequence
Length = 631
Score = 29.0 bits (57), Expect(2) = 0.11
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +1 / -1
Query: 1543 IAHPSIVDAAVVQMKDDSCGEIPVAFVVASGGSGITEDEIKQYVAK 1680
++HP +AAVV ++ + G+ AFV G +E+ K + K
Sbjct: 631 VSHPQCAEAAVVGVEHEVKGQGIYAFVTLVDGVPYSEELRKSLITK 494
Score = 27.2 bits (53), Expect(2) = 0.11
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +1 / -1
Query: 1672 VAKQVVFYKRLHKIFFVEAIPKAPSGKILRKDLR 1773
V Q+ + +I + +PK SGKI+R+ LR
Sbjct: 493 VRTQIGAFAAPDRIHWAPGLPKTRSGKIMRRILR 392
>gb|CA025940.1|CA025940 HZ53J12r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ53J12
5-PRIME, mRNA sequence
Length = 381
Score = 38.6 bits (78), Expect = 0.12
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -3 / +3
Query: 1270 SSPPCRRHRTSPVTAPWQTPCTSRAPGLP 1184
++ P R R+ P TAPW PC S +P P
Sbjct: 213 AAAPPPRRRSRPTTAPWPAPCASASPSRP 299
>gb|AF000940.1|AF000940 Hordeum vulgare ribonuclease gene, complete cds
Length = 1583
Score = 32.2 bits (64), Expect(2) = 0.15
Identities = 17/65 (26%), Positives = 28/65 (43%)
Frame = -2 / +1
Query: 932 APARIPHSRMECSEYTWNMGSTQRTTSSSRKWRFGLSPSTSCATLVTSPRCDSITPLGSP 753
AP+R P SR S +W+ +T T+SS +P+ ++ S + GS
Sbjct: 1372 APSRAPSSRGRGSSRSWSATATSPATASSTSSTSASTPAPPASSSAPSSPAAGLAATGSS 1551
Query: 752 VVPDE 738
P +
Sbjct: 1552 SRPSD 1566
Score = 23.5 bits (45), Expect(2) = 0.15
Identities = 13/40 (32%), Positives = 17/40 (42%)
Frame = -2 / +1
Query: 1070 RSWRSMASLLTISTAMGSTSGTIVMPCLFTSSNMRRVSKR 951
RS R + ++ G TSG P TSS S+R
Sbjct: 1171 RSGRRWRARRATGSSSGRTSGRSTAPARRTSSTSTATSRR 1290
>gb|BI951631.1|BI951631 HVSMEm0001L07f Hordeum vulgare green seedling EST library
HVcDNA0014 (Blumeria infected) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEm0001L07f, mRNA sequence
Length = 814
Score = 29.0 bits (57), Expect(2) = 0.15
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = -2 / +1
Query: 68 WWSWTWIGAMC 36
WW WTW G C
Sbjct: 397 WWLWTWRGRCC 429
Score = 26.7 bits (52), Expect(2) = 0.15
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -2 / +2
Query: 119 EAGVTCRRQEACCFRPGWWS 60
E G TC+R + C R G WS
Sbjct: 314 EPGFTCQR*QRCRRRTGTWS 373
>gb|BI948051.1|BI948051 HVSMEl0008A05f Hordeum vulgare spike EST library HVcDNA0012 (Fusarium
infected) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEl0008A05f, mRNA sequence
Length = 852
Score = 27.6 bits (54), Expect(3) = 0.15
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +2 / -1
Query: 1085 WSSRGPRPWARSCRTCCAP 1141
W+S P PWARS R P
Sbjct: 327 WASSTPAPWARSRRCRSTP 271
Score = 25.8 bits (50), Expect(3) = 0.15
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +3 / -1
Query: 57 PAPPTRPEAASLLSPARNS 113
PAPP RP A PAR S
Sbjct: 486 PAPPPRPRAPPRPHPARPS 430
Score = 24.9 bits (48), Expect(3) = 0.15
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +3 / -1
Query: 1278 AKDHRPGDRAVPPPQPARG 1334
A+ P RA PPP+ ARG
Sbjct: 198 AEARSPRGRAPPPPRRARG 142
>gb|BF263223.2|BF263223 HV_CEa0006C20f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0006C20f, mRNA sequence
Length = 597
Score = 38.2 bits (77), Expect = 0.16
Identities = 18/46 (39%), Positives = 18/46 (39%)
Frame = +3 / -3
Query: 1245 RCLRHGGEECRAKDHRPGDRAVPPPQPARGDLHQGQAVDERVPQQP 1382
RC G CR G R PPP P G G ER PQ P
Sbjct: 430 RCSAPAGRGCRXGWRTAGCRRRPPPAPCPGPSPPGTRARERCPQTP 293
>gb|BG367154.2|BG367154 HVSMEi0011A18f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0011A18f, mRNA sequence
Length = 493
Score = 38.2 bits (77), Expect = 0.16
Identities = 16/59 (27%), Positives = 30/59 (50%)
Frame = +1 / +3
Query: 1630 SGGSGITEDEIKQYVAKQVVFYKRLHKIFFVEAIPKAPSGKILRKDLRAKLASGFSNGS 1806
SG ++E+E+ + ++ + K+ FV+ +PK +GK+ R LR + GS
Sbjct: 39 SGAGEVSEEELVAFCRSKMAHFMVPRKVVFVDELPKNATGKVRRGALRERARGLMPRGS 215
>gb|BM816388.1|BM816388 HB02D12_T3.ab1 HB Hordeum vulgare subsp. vulgare cDNA clone
HB02D12_T3.ab1 similar to ABA- and ripening-induced
protein [Lycopersicon esculentum],ABSCISIC STRESS
RIPENING PROTEIN 1 gi|7488971|pir|T06588 abscisic stress
ripening protein 1 - tomato gi|170376|gb|AAA34137.1|
(L08255), mRNA sequence
Length = 841
Score = 38.2 bits (77), Expect = 0.16
Identities = 23/68 (33%), Positives = 29/68 (42%)
Frame = -2 / -1
Query: 554 VMTTVAPEAAACLAISGGVWSGLAVVAAAPRREHARNASANSTEFGRSSITVPPLRTPRQ 375
V TT+ + AC+ G A PRR R ASA RS P R PR+
Sbjct: 778 VFTTIGWTSVACMVTQLQ*LCGRASCTLLPRRSRRRPASARGARGTRSRPRRAPPRXPRR 599
Query: 374 ARIPAATR 351
R A++R
Sbjct: 598 PRXGASSR 575
>gb|BM373145.2|BM373145 EBma04_SQ003_E13_R maternal, 10 DPA, no treatment, cv Optic, EBma04
Hordeum vulgare subsp. vulgare cDNA clone
EBma04_SQ003_E13 5', mRNA sequence
Length = 568
Score = 38.2 bits (77), Expect = 0.16
Identities = 18/46 (39%), Positives = 18/46 (39%)
Frame = +3 / -3
Query: 1245 RCLRHGGEECRAKDHRPGDRAVPPPQPARGDLHQGQAVDERVPQQP 1382
RC G CR G R PPP P G G ER PQ P
Sbjct: 410 RCYAPAGRGCRPGWRTAGCRRRPPPAPCPGPSPPGTRARERCPQTP 273
>gb|BQ754375.1|BQ754375 EBca01_SQ003_M06_R carpel, pre-anthesis, no treatment, cv Optic,
EBca01 Hordeum vulgare subsp. vulgare cDNA clone
EBca01_SQ003_M06 5', mRNA sequence
Length = 403
Score = 33.1 bits (66), Expect(2) = 0.17
Identities = 16/48 (33%), Positives = 21/48 (43%)
Frame = +3 / +2
Query: 51 PGPAPPTRPEAASLLSPARNSSLQRHTYTSAGSEEDGVAYGAAGRDNG 194
P PAPP + + PAR + RH + + V G AG D G
Sbjct: 5 PSPAPPPQQDGEGTHRPAREALRPRHHPRIQEVQVEPVRDGVAGADRG 148
Score = 25.4 bits (49), Expect(2) = 0.17
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = +2 / +2
Query: 1106 PWARSCRTCCAPSSLAPCSDRVMG*QRQARCSRCA 1210
P R R APSS C R G + + C+R A
Sbjct: 263 PPPRQHRASSAPSSPPTCPPRPWGKKSGSSCTRAA 367
>gb|BJ463643.1|BJ463643 BJ463643 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags32o06 5', mRNA sequence
Length = 659
Score = 29.0 bits (57), Expect(3) = 0.17
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +1 / +1
Query: 1417 WLHTGDIGYVDDGDEIFIVDRLKELIK 1497
W ++GDIG + I+DR K+++K
Sbjct: 532 WFYSGDIGRFHPDGCLEIIDRKKDIVK 612
Score = 24.4 bits (47), Expect(3) = 0.17
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +1 / +1
Query: 1330 GEICIRGKQLMKGYLNNPEAT 1392
GEI I G + KGY N T
Sbjct: 433 GEIVIGGPNVTKGYFKNEAKT 495
Score = 24.0 bits (46), Expect(3) = 0.17
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = +1 / +1
Query: 1153 AVLGQGYGMTE 1185
A +GQGYG+TE
Sbjct: 262 APIGQGYGLTE 294
>gb|BJ462651.1|BJ462651 BJ462651 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags29k18 5', mRNA sequence
Length = 703
Score = 29.0 bits (57), Expect(3) = 0.19
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +1 / +2
Query: 1417 WLHTGDIGYVDDGDEIFIVDRLKELIK 1497
W ++GDIG + I+DR K+++K
Sbjct: 527 WFYSGDIGRFHPDGCLEIIDRKKDIVK 607
Score = 24.4 bits (47), Expect(3) = 0.19
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +1 / +2
Query: 1330 GEICIRGKQLMKGYLNNPEAT 1392
GEI I G + KGY N T
Sbjct: 428 GEIVIGGPNVTKGYFKNEAKT 490
Score = 24.0 bits (46), Expect(3) = 0.19
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = +1 / +2
Query: 1153 AVLGQGYGMTE 1185
A +GQGYG+TE
Sbjct: 257 APIGQGYGLTE 289
>gb|BI952014.1|BI952014 HVSMEm0004D15f Hordeum vulgare green seedling EST library HVcDNA0014
(Blumeria infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEm0004D15f, mRNA sequence
Length = 870
Score = 34.1 bits (68), Expect(2) = 0.19
Identities = 14/26 (53%), Positives = 15/26 (57%)
Frame = +2 / -1
Query: 1193 RCSRCAWRLPRSRYR*SPVPAARW*G 1270
RCSR WR R R P P +RW*G
Sbjct: 225 RCSRPCWRTERRRGGGPPPPRSRW*G 148
Score = 25.4 bits (49), Expect(2) = 0.19
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +3 / -1
Query: 60 APPTRPEAASLLSPAR 107
+PPTRP AS P R
Sbjct: 411 SPPTRPNGASYYMPCR 364
>gb|BU988485.1|BU988485 HF17M14r HF Hordeum vulgare subsp. vulgare cDNA clone HF17M14
5-PRIME, mRNA sequence
Length = 653
Score = 30.9 bits (61), Expect(2) = 0.20
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +1 / +1
Query: 1330 GEICIRGKQLMKGYLNNPEAT 1392
GEI IRG + GY NPE T
Sbjct: 559 GEILIRGTTVFTGYYKNPELT 621
Score = 28.1 bits (55), Expect(2) = 0.20
Identities = 9/20 (45%), Positives = 16/20 (80%)
Frame = +1 / +1
Query: 1078 VRMVISGAAPMGKELQDLLR 1137
+R++ISG AP+ E+++ LR
Sbjct: 316 LRLLISGGAPLSTEIEEFLR 375
>gb|BI947741.1|BI947741 HVSMEl0006L04f Hordeum vulgare spike EST library HVcDNA0012 (Fusarium
infected) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEl0006L04f, mRNA sequence
Length = 844
Score = 29.0 bits (57), Expect(2) = 0.20
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = -3 / +2
Query: 1429 RCAATPPSRWSSPLP 1385
RC A PPSR SSP P
Sbjct: 89 RCCAPPPSRPSSPCP 133
Score = 26.3 bits (51), Expect(2) = 0.20
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -3 / +2
Query: 1303 RSPGR*SLARHSSPPCRRHRTSP 1235
R P R + + PPCRR R SP
Sbjct: 164 RRPPRRARPPPAPPPCRRRRWSP 232
>gb|BI949299.1|BI949299 HVSMEl0013D15f Hordeum vulgare spike EST library HVcDNA0012 (Fusarium
infected) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEl0013D15f, mRNA sequence
Length = 841
Score = 29.0 bits (57), Expect(2) = 0.20
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = +2 / -1
Query: 1133 CAPSSLAPCSDRVMG*QRQARCSRCAWRLPRSRYR*SPVPAARW 1264
C+ PC R G* R+ R + C WR *+P P W
Sbjct: 448 CSRRRARPCPRRSGG**RRPRRT*CPWRRRPR*AT*APPPCRTW 317
Score = 26.3 bits (51), Expect(2) = 0.20
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = +2 / -1
Query: 1103 RPWARSCRTCCAPSSLAP 1156
R W R CR+C PS P
Sbjct: 523 RTWCRRCRSCRDPSPGGP 470
>gb|BE455773.2|BE455773 HVSMEg0019M22f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0019M22f, mRNA sequence
Length = 871
Score = 24.4 bits (47), Expect(3) = 0.21
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -3 / +1
Query: 1426 CAATPPSRWSSPLPP 1382
C+A+PP PLPP
Sbjct: 16 CSASPPDLSPHPLPP 60
Score = 23.5 bits (45), Expect(3) = 0.21
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -3 / +1
Query: 1330 RAGCGGGTARSPGR 1289
R G GGG + PGR
Sbjct: 160 RGGAGGGRSGEPGR 201
Score = 23.1 bits (44), Expect(3) = 0.21
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = -3 / +3
Query: 1252 RHRTSPVTAPWQTPCTSRAPGL 1187
R R +A PC SRAPG+
Sbjct: 324 RSRGPRPSASPSAPCCSRAPGV 389
>gb|BQ471311.1|BQ471311 HV02A13r HV Hordeum vulgare subsp. vulgare cDNA clone HV02A13
5-PRIME, mRNA sequence
Length = 506
Score = 30.9 bits (61), Expect(2) = 0.21
Identities = 19/53 (35%), Positives = 22/53 (41%)
Frame = +2 / -3
Query: 1088 SSRGPRPWARSCRTCCAPSSLAPCSDRVMG*QRQARCSRCAWRLPRSRYR*SP 1246
+S G R R R C PSS C G +R R +R WR R SP
Sbjct: 357 ASAGRRGGRRRGRRRCRPSSRRGCWRPPWGGRRPRRGTRSCWRTASGRAGRSP 199
Score = 24.4 bits (47), Expect(2) = 0.21
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = +3 / -1
Query: 1275 RAKDHRPGDRAVPPPQPARGDLHQGQAVDERVPQ 1376
R + + G V PP PA + QAV R P+
Sbjct: 227 RRLEGQAGHLPVVPPHPAASLVQHRQAVGPRRPE 126
>gb|BF621591.3|BF621591 HVSMEa0011I11f Hordeum vulgare seedling shoot EST library HVcDNA0001
(Cold stress) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEa0011I11f, mRNA sequence
Length = 491
Score = 29.0 bits (57), Expect(2) = 0.21
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = -3 / +2
Query: 1429 RCAATPPSRWSSPLP 1385
RC A PPSR SSP P
Sbjct: 86 RCCAPPPSRPSSPCP 130
Score = 26.3 bits (51), Expect(2) = 0.21
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -3 / +2
Query: 1303 RSPGR*SLARHSSPPCRRHRTSP 1235
R P R + + PPCRR R SP
Sbjct: 161 RRPPRRARPPPAPPPCRRRRWSP 229
>gb|BM370199.2|BM370199 EBro08_SQ003_E18_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ003_E18 5', mRNA sequence
Length = 430
Score = 29.0 bits (57), Expect(2) = 0.21
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = -3 / +3
Query: 1429 RCAATPPSRWSSPLP 1385
RC A PPSR SSP P
Sbjct: 84 RCCAPPPSRPSSPCP 128
Score = 26.3 bits (51), Expect(2) = 0.21
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -3 / +3
Query: 1303 RSPGR*SLARHSSPPCRRHRTSP 1235
R P R + + PPCRR R SP
Sbjct: 159 RRPPRRARPPPAPPPCRRRRWSP 227
>gb|BQ461012.1|BQ461012 HE01H09r HE Hordeum vulgare subsp. vulgare cDNA clone HE01H09
5-PRIME, mRNA sequence
Length = 370
Score = 29.0 bits (57), Expect(2) = 0.21
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = -3 / +1
Query: 1429 RCAATPPSRWSSPLP 1385
RC A PPSR SSP P
Sbjct: 88 RCCAPPPSRPSSPCP 132
Score = 26.3 bits (51), Expect(2) = 0.21
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -3 / +1
Query: 1303 RSPGR*SLARHSSPPCRRHRTSP 1235
R P R + + PPCRR R SP
Sbjct: 163 RRPPRRARPPPAPPPCRRRRWSP 231
>gb|BF066098.1|BF066098 HV_CEb0014N11f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0014N11f, mRNA sequence
Length = 815
Score = 37.7 bits (76), Expect = 0.22
Identities = 18/46 (39%), Positives = 18/46 (39%)
Frame = +3 / -2
Query: 1245 RCLRHGGEECRAKDHRPGDRAVPPPQPARGDLHQGQAVDERVPQQP 1382
RC G CR G R PPP P G G ER PQ P
Sbjct: 385 RCSAPAGRGCRPGWRTAGCRRRPPPAPCPGPSPPGTRARERCPQTP 248
>gb|BM816593.1|BM816593 HB106H01_SK.ab1 HB Hordeum vulgare subsp. vulgare cDNA clone
HB106H01_SK.ab1 similar to Glutathione
oxidase,Glutathione peroxidase,Peroxidase,, mRNA sequence
Length = 888
Score = 37.7 bits (76), Expect = 0.22
Identities = 18/46 (39%), Positives = 18/46 (39%)
Frame = +3 / -3
Query: 1245 RCLRHGGEECRAKDHRPGDRAVPPPQPARGDLHQGQAVDERVPQQP 1382
RC G CR G R PPP P G G ER PQ P
Sbjct: 445 RCSAPAGRGCRPGWRTAGCRRRPPPAPCPGPSPPGTRARERCPQTP 308
>gb|BQ467377.1|BQ467377 HS03J05r HS Hordeum vulgare subsp. vulgare cDNA clone HS03J05
5-PRIME, mRNA sequence
Length = 589
Score = 37.7 bits (76), Expect = 0.22
Identities = 18/46 (39%), Positives = 18/46 (39%)
Frame = +3 / -3
Query: 1245 RCLRHGGEECRAKDHRPGDRAVPPPQPARGDLHQGQAVDERVPQQP 1382
RC G CR G R PPP P G G ER PQ P
Sbjct: 419 RCSAPAGRGCRPGWRTAGCRRRPPPAPCPGPSPPGTRARERCPQTP 282
>gb|BQ662668.1|BQ662668 HS03J05u HS Hordeum vulgare subsp. vulgare cDNA clone HS03J05
3-PRIME, mRNA sequence
Length = 488
Score = 37.7 bits (76), Expect = 0.22
Identities = 18/46 (39%), Positives = 18/46 (39%)
Frame = +3 / +2
Query: 1245 RCLRHGGEECRAKDHRPGDRAVPPPQPARGDLHQGQAVDERVPQQP 1382
RC G CR G R PPP P G G ER PQ P
Sbjct: 332 RCSAPAGRGCRPGWRTAGCRRRPPPAPCPGPSPPGTRARERCPQTP 469
>gb|BI779648.2|BI779648 EBro01_SQ004_K20_R root, 3 week, hydroponic grown, no treatment, cv
Optic, EBro01 Hordeum vulgare subsp. vulgare cDNA clone
EBro01_SQ004_K20 5', mRNA sequence
Length = 517
Score = 37.7 bits (76), Expect = 0.22
Identities = 18/46 (39%), Positives = 18/46 (39%)
Frame = +3 / -3
Query: 1245 RCLRHGGEECRAKDHRPGDRAVPPPQPARGDLHQGQAVDERVPQQP 1382
RC G CR G R PPP P G G ER PQ P
Sbjct: 422 RCSAPAGRGCRPGWRTAGCRRRPPPAPCPGPSPPGTRARERCPQTP 285
>gb|BM443157.2|BM443157 EBro02_SQ002_M17_R root, 3 week, hydroponic grown, low nitrogen, cv
Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone
EBro02_SQ002_M17 5', mRNA sequence
Length = 403
Score = 37.7 bits (76), Expect = 0.22
Identities = 18/46 (39%), Positives = 18/46 (39%)
Frame = +3 / -3
Query: 1245 RCLRHGGEECRAKDHRPGDRAVPPPQPARGDLHQGQAVDERVPQQP 1382
RC G CR G R PPP P G G ER PQ P
Sbjct: 173 RCSAPAGRGCRPGWRTAGCRRRPPPAPCPGPSPPGTRARERCPQTP 36
>gb|BM443180.2|BM443180 EBro02_SQ002_P04_R root, 3 week, hydroponic grown, low nitrogen, cv
Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone
EBro02_SQ002_P04 5', mRNA sequence
Length = 376
Score = 37.7 bits (76), Expect = 0.22
Identities = 18/46 (39%), Positives = 18/46 (39%)
Frame = +3 / -3
Query: 1245 RCLRHGGEECRAKDHRPGDRAVPPPQPARGDLHQGQAVDERVPQQP 1382
RC G CR G R PPP P G G ER PQ P
Sbjct: 173 RCSAPAGRGCRPGWRTAGCRRRPPPAPCPGPSPPGTRARERCPQTP 36
>gb|BQ766858.1|BQ766858 EBro08_SQ007_G07_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ007_G07 5', mRNA sequence
Length = 526
Score = 37.7 bits (76), Expect = 0.22
Identities = 18/46 (39%), Positives = 18/46 (39%)
Frame = +3 / -2
Query: 1245 RCLRHGGEECRAKDHRPGDRAVPPPQPARGDLHQGQAVDERVPQQP 1382
RC G CR G R PPP P G G ER PQ P
Sbjct: 429 RCSAPAGRGCRPGWRTAGCRRRPPPAPCPGPSPPGTRARERCPQTP 292
>gb|BU980311.1|BU980311 HA20E20r HA Hordeum vulgare subsp. vulgare cDNA clone HA20E20
5-PRIME, mRNA sequence
Length = 437
Score = 37.7 bits (76), Expect = 0.22
Identities = 18/46 (39%), Positives = 18/46 (39%)
Frame = +3 / -2
Query: 1245 RCLRHGGEECRAKDHRPGDRAVPPPQPARGDLHQGQAVDERVPQQP 1382
RC G CR G R PPP P G G ER PQ P
Sbjct: 205 RCSAPAGRGCRPGWRTAGCRRRPPPAPCPGPSPPGTRARERCPQTP 68
>gb|BU999337.1|BU999337 HI14D06r HI Hordeum vulgare subsp. vulgare cDNA clone HI14D06
5-PRIME, mRNA sequence
Length = 642
Score = 37.7 bits (76), Expect = 0.22
Identities = 18/46 (39%), Positives = 18/46 (39%)
Frame = +3 / -3
Query: 1245 RCLRHGGEECRAKDHRPGDRAVPPPQPARGDLHQGQAVDERVPQQP 1382
RC G CR G R PPP P G G ER PQ P
Sbjct: 505 RCSAPAGRGCRPGWRTAGCRRRPPPAPCPGPSPPGTRARERCPQTP 368
>gb|CA008224.1|CA008224 HU10E19r HU Hordeum vulgare subsp. vulgare cDNA clone HU10E19
5-PRIME, mRNA sequence
Length = 466
Score = 37.7 bits (76), Expect = 0.22
Identities = 18/46 (39%), Positives = 18/46 (39%)
Frame = +3 / -2
Query: 1245 RCLRHGGEECRAKDHRPGDRAVPPPQPARGDLHQGQAVDERVPQQP 1382
RC G CR G R PPP P G G ER PQ P
Sbjct: 396 RCSAPAGRGCRPGWRTAGCRRRPPPAPCPGPSPPGTRARERCPQTP 259
>gb|CA024558.1|CA024558 HZ49K09r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ49K09
5-PRIME, mRNA sequence
Length = 622
Score = 37.7 bits (76), Expect = 0.22
Identities = 18/46 (39%), Positives = 18/46 (39%)
Frame = +3 / -3
Query: 1245 RCLRHGGEECRAKDHRPGDRAVPPPQPARGDLHQGQAVDERVPQQP 1382
RC G CR G R PPP P G G ER PQ P
Sbjct: 527 RCSAPAGRGCRPGWRTAGCRRRPPPAPCPGPSPPGTRARERCPQTP 390
>gb|CA030480.1|CA030480 HX07D01r HX Hordeum vulgare subsp. vulgare cDNA clone HX07D01
5-PRIME, mRNA sequence
Length = 440
Score = 37.7 bits (76), Expect = 0.22
Identities = 16/28 (57%), Positives = 18/28 (64%)
Frame = -1 / +1
Query: 1677 RHVLLDLVLGDPGAAGRHDERHRDLAAG 1594
R LL L +G P GR D RHR+LAAG
Sbjct: 355 RSSLLSLAVGLPRGGGRDDHRHRELAAG 438
>gb|CA031446.1|CA031446 HX09P12r HX Hordeum vulgare subsp. vulgare cDNA clone HX09P12
5-PRIME, mRNA sequence
Length = 596
Score = 37.7 bits (76), Expect = 0.22
Identities = 16/28 (57%), Positives = 18/28 (64%)
Frame = -1 / +2
Query: 1677 RHVLLDLVLGDPGAAGRHDERHRDLAAG 1594
R LL L +G P GR D RHR+LAAG
Sbjct: 359 RSSLLSLAVGLPRGGGRDDHRHRELAAG 442
>gb|BU976603.1|BU976603 HA03P15r HA Hordeum vulgare subsp. vulgare cDNA clone HA03P15
5-PRIME, mRNA sequence
Length = 627
Score = 31.3 bits (62), Expect(2) = 0.28
Identities = 16/66 (24%), Positives = 28/66 (42%)
Frame = -3 / +2
Query: 1372 GTLSSTACP*CKSPRAGCGGGTARSPGR*SLARHSSPPCRRHRTSPVTAPWQTPCTSRAP 1193
G+ + +A P SP ++R+P S S CR + ++P CT+ +P
Sbjct: 197 GSTAGSASPSASSPSPASRASSSRAPSAPSSG*RSGGSCRASPSPTSSSPATRACTATSP 376
Query: 1192 GLPLSS 1175
+S
Sbjct: 377 ASSTTS 394
Score = 23.5 bits (45), Expect(2) = 0.28
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = -2 / +2
Query: 1196 TGPASVIP*PCPSTARGSLARSRS 1125
T PAS P P T RGS + +RS
Sbjct: 410 TSPASSRSSPRPWTLRGSSSATRS 481
>gb|AV928766.1|AV928766 AV928766 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp. vulgare
cDNA clone basd15j18 3', mRNA sequence
Length = 599
Score = 27.6 bits (54), Expect(2) = 0.28
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +1 / -3
Query: 1546 AHPSIVDAAVVQMKDDSCGEIPVAFVVASGGSGITEDEIKQYVAK 1680
+HP +AAVV ++ + G+ AFV G +E+ K + K
Sbjct: 597 SHPQCAEAAVVGVEHEVKGQGIYAFVTLVDGVPYSEELRKSLITK 463
Score = 27.2 bits (53), Expect(2) = 0.28
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +1 / -3
Query: 1672 VAKQVVFYKRLHKIFFVEAIPKAPSGKILRKDLR 1773
V Q+ + +I + +PK SGKI+R+ LR
Sbjct: 462 VRTQIGAFAAPDRIHWAPGLPKTRSGKIMRRILR 361
>gb|CV057327.1|CV057327 BNEL26e7 Barley EST endosperm library Hordeum vulgare subsp. vulgare
cDNA clone BNEL26e7 5' similar to putative
ribonucleoside-diphosphate reductase, mRNA sequence
Length = 537
Score = 31.3 bits (62), Expect(2) = 0.28
Identities = 16/66 (24%), Positives = 28/66 (42%)
Frame = -3 / +1
Query: 1372 GTLSSTACP*CKSPRAGCGGGTARSPGR*SLARHSSPPCRRHRTSPVTAPWQTPCTSRAP 1193
G+ + +A P SP ++R+P S S CR + ++P CT+ +P
Sbjct: 187 GSTAGSASPSASSPSPASRASSSRAPSAPSSG*RSGGSCRASPSPTSSSPATRACTATSP 366
Query: 1192 GLPLSS 1175
+S
Sbjct: 367 ASSTTS 384
Score = 23.5 bits (45), Expect(2) = 0.28
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = -2 / +1
Query: 1196 TGPASVIP*PCPSTARGSLARSRS 1125
T PAS P P T RGS + +RS
Sbjct: 400 TSPASSRSSPRPWTLRGSSSATRS 471
>gb|BM372440.2|BM372440 EBro03_SQ004_P11_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ004_P11 5', mRNA sequence
Length = 478
Score = 29.5 bits (58), Expect(2) = 0.29
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = -2 / +3
Query: 1232 NGSLANAMHIESTGPASVIP*PCPSTARGSLARSRSCSSLP 1110
+ SL + + S PA ++ *P P++ RGS +S + LP
Sbjct: 57 SSSLPSGLLPPSFAPAKMLR*PAPTSTRGSPQQSAAPERLP 179
Score = 25.4 bits (49), Expect(2) = 0.29
Identities = 17/53 (32%), Positives = 21/53 (39%)
Frame = -1 / +1
Query: 1137 AQQVLQLLAHGRGPRDDHAHRREVVAVDGVALDHLHRDGQHERHDRDAVPLHQ 979
++ +LQ HGR R HRR A G D G E A LH+
Sbjct: 151 SKALLQRGCHGRSQRRGRRHRRRRSAHPGECEDASVGQGAPEPRRSGAHHLHR 309
>gb|BQ659445.1|BQ659445 HE01H09u HE Hordeum vulgare subsp. vulgare cDNA clone HE01H09
3-PRIME, mRNA sequence
Length = 462
Score = 29.0 bits (57), Expect(2) = 0.29
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = -3 / -3
Query: 1429 RCAATPPSRWSSPLP 1385
RC A PPSR SSP P
Sbjct: 397 RCCAPPPSRPSSPCP 353
Score = 25.8 bits (50), Expect(2) = 0.29
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = -3 / -3
Query: 1303 RSPGR*SLARHSSPPCRRHRTSP 1235
R P R + PPCRR R SP
Sbjct: 322 RRPPRRGRPPPAPPPCRRRRWSP 254
>gb|CA031501.1|CA031501 HX10C23r HX Hordeum vulgare subsp. vulgare cDNA clone HX10C23
5-PRIME, mRNA sequence
Length = 275
Score = 37.3 bits (75), Expect = 0.30
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = -3 / +1
Query: 1276 RHSSPPCRRHRTSPVTAPWQTPCTSRAPGLPLSS 1175
R + PCRRH T P AP P S +P P SS
Sbjct: 163 RPAPQPCRRHPTVPARAPSSAPSCSPSPPTPPSS 264
>gb|CB877674.1|CB877674 HP05M14T HP Hordeum vulgare subsp. vulgare cDNA clone HP05M14
5-PRIME, mRNA sequence
Length = 578
Score = 37.3 bits (75), Expect = 0.30
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = +1 / +3
Query: 379 LGVRSGGTVMLLLPNSVEFALAFLACSRLGA 471
+GV G V++ LP +E +A LAC+R+GA
Sbjct: 471 VGVEKGDAVVIYLPMLMELPIAMLACARIGA 563
>gb|CV056083.1|CV056083 BNEL13G11 Barley EST endosperm library Hordeum vulgare subsp. vulgare
cDNA clone BNEL13G11 5' similar to putative transcription
factor, mRNA sequence
Length = 660
Score = 30.4 bits (60), Expect(2) = 0.38
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -3 / -1
Query: 1279 ARHSSPPCRRHRTSPVTAPWQTPCTSRAP 1193
+ +PPCRR R S + PW+ R P
Sbjct: 90 SERGAPPCRRGRPSRSSCPWRRSPGPRRP 4
Score = 24.0 bits (46), Expect(2) = 0.38
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -3 / -1
Query: 1330 RAGCGGGTARSPG 1292
R GCGGG PG
Sbjct: 150 RCGCGGGGGGRPG 112
>gb|CB875660.1|CB875660 HX08P17w HX Hordeum vulgare subsp. vulgare cDNA clone HX08P17
3-PRIME, mRNA sequence
Length = 653
Score = 27.2 bits (53), Expect(2) = 0.38
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +1 / -2
Query: 1672 VAKQVVFYKRLHKIFFVEAIPKAPSGKILRKDLR 1773
V Q+ + +I + +PK SGKI+R+ LR
Sbjct: 520 VRTQIGAFAAPDRIHWAPGLPKTRSGKIMRRILR 419
Score = 27.2 bits (53), Expect(2) = 0.38
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +1 / -2
Query: 1549 HPSIVDAAVVQMKDDSCGEIPVAFVVASGGSGITEDEIKQYVAK 1680
HP +AAVV ++ + G+ AFV G +E+ K + K
Sbjct: 652 HPQCAEAAVVGVEHEVKGQGIYAFVTLVDGVPYSEELRKSLITK 521
>gb|BF255758.1|BF255758 HVSMEf0007L17f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEf0007L17f, mRNA sequence
Length = 913
Score = 36.8 bits (74), Expect = 0.42
Identities = 15/27 (55%), Positives = 17/27 (62%)
Frame = -3 / -2
Query: 1267 SPPCRRHRTSPVTAPWQTPCTSRAPGL 1187
SPP R TSP +P PCT+ APGL
Sbjct: 720 SPPLRVSPTSPSPSPLLPPCTTSAPGL 640
>gb|BI952857.1|BI952857 HVSMEm0007P20f Hordeum vulgare green seedling EST library HVcDNA0014
(Blumeria infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEm0007P20f, mRNA sequence
Length = 854
Score = 36.8 bits (74), Expect = 0.42
Identities = 22/59 (37%), Positives = 27/59 (45%)
Frame = -1 / -3
Query: 1092 DDHAHRREVVAVDGVALDHLHRDGQHERHDRDAVPLHQLEHAESVEALHDHERRAGAHP 916
DD E A + VALD H DA+ +HQL A+ VEA + RAG P
Sbjct: 603 DDVEALTEASATNTVALDEAHEHHLACPDGEDALRVHQLGVAQVVEAALGEDLRAGLEP 427
>gb|BI954277.1|BI954277 HVSMEm0016P07f Hordeum vulgare green seedling EST library
HVcDNA0014 (Blumeria infected) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEm0016P07f, mRNA sequence
Length = 680
Score = 36.8 bits (74), Expect = 0.42
Identities = 20/54 (37%), Positives = 26/54 (48%)
Frame = +3 / -2
Query: 51 PGPAPPTRPEAASLLSPARNSSLQRHTYTSAGSEEDGVAYGAAGRDNGVPLDAS 212
P P PT + LSPA + ++ T SAG E+ A AA RD P A+
Sbjct: 367 PSPTHPTNLLPSPRLSPAPSVDIRSSTRASAGPEDAVTAPAAASRDAPAPRAAA 206
>gb|BI957820.1|BI957820 HVSMEn0011H20f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0011H20f,
mRNA sequence
Length = 1081
Score = 36.8 bits (74), Expect = 0.42
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = -3 / -1
Query: 1267 SPPCRRHRTSPVTAPWQTPCTSRAPGLPLS 1178
+PPCRR R+ P A W P S P +P+S
Sbjct: 820 APPCRRPRSVPRPASWPGPARSWRPRVPVS 731
>gb|AV913592.1|AV913592 AV913592 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags22k01 5', mRNA sequence
Length = 663
Score = 36.8 bits (74), Expect = 0.42
Identities = 17/59 (28%), Positives = 31/59 (52%)
Frame = +1 / +1
Query: 379 LGVRSGGTVMLLLPNSVEFALAFLACSRLGAAATTANPLHTPPEIAKQAAASGATVVIT 555
+GV G V++ LP +E +A LAC+R+GA + + +A++ +V+T
Sbjct: 88 VGVGKGDAVVIYLPMLLELPIAMLACARIGAVHSVVFAGFSADSLAQRIVDCKPKLVLT 264
>gb|AV917116.1|AV917116 AV917116 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags20n12 5', mRNA sequence
Length = 520
Score = 36.8 bits (74), Expect = 0.42
Identities = 17/59 (28%), Positives = 31/59 (52%)
Frame = +1 / +3
Query: 379 LGVRSGGTVMLLLPNSVEFALAFLACSRLGAAATTANPLHTPPEIAKQAAASGATVVIT 555
+GV G V++ LP +E +A LAC+R+GA + + +A++ +V+T
Sbjct: 333 VGVGKGDAVVIYLPMLLELPIAMLACARIGAVHSVVFAGFSADSLAQRIVDCKPKLVLT 509
>gb|CA031088.1|CA031088 HX08P17r HX Hordeum vulgare subsp. vulgare cDNA clone HX08P17
5-PRIME, mRNA sequence
Length = 647
Score = 36.8 bits (74), Expect = 0.42
Identities = 17/59 (28%), Positives = 31/59 (52%)
Frame = +1 / +1
Query: 379 LGVRSGGTVMLLLPNSVEFALAFLACSRLGAAATTANPLHTPPEIAKQAAASGATVVIT 555
+GV G V++ LP +E +A LAC+R+GA + + +A++ +V+T
Sbjct: 49 VGVGKGDAVVIYLPMLLELPIAMLACARIGAVHSVVFAGFSADSLAQRIVDCKPKLVLT 225
>gb|BI948719.1|BI948719 HVSMEl0010J18f Hordeum vulgare spike EST library HVcDNA0012 (Fusarium
infected) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEl0010J18f, mRNA sequence
Length = 865
Score = 24.4 bits (47), Expect(3) = 0.48
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -3 / -1
Query: 1369 TLSSTACP*CKSPRAGCGGGTARSPGR 1289
+LSS+AC ++ GC AR GR
Sbjct: 379 SLSSSACCTLRTAPPGCSSA*ARPQGR 299
Score = 23.1 bits (44), Expect(3) = 0.48
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -3 / -3
Query: 1414 PPSRWSSPLPP 1382
PP+R SSP PP
Sbjct: 458 PPTRSSSPSPP 426
Score = 22.1 bits (42), Expect(3) = 0.48
Identities = 8/19 (42%), Positives = 9/19 (47%)
Frame = -3 / -1
Query: 1237 PVTAPWQTPCTSRAPGLPL 1181
P +PW TP P L L
Sbjct: 199 PSPSPWPTPLPPPPPSLSL 143
>gb|BG365769.2|BG365769 HVSMEi0004C05f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0004C05f, mRNA sequence
Length = 923
Score = 28.6 bits (56), Expect(2) = 0.50
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +3 / +3
Query: 1281 KDHRPGDRAVPPPQPARGD 1337
+DHR G R VPP P R +
Sbjct: 375 EDHRQGPRGVPPRPPRRDE 431
Score = 25.4 bits (49), Expect(2) = 0.50
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +3 / +3
Query: 1359 DERVPQQPGGNGEDHRLG 1412
D R+P++P G H+LG
Sbjct: 435 DARLPRRPRSQGRPHQLG 488
>gb|BI958905.1|BI958905 HVSMEn0017C09f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0017C09f,
mRNA sequence
Length = 670
Score = 35.9 bits (72), Expect(2) = 0.50
Identities = 17/43 (39%), Positives = 19/43 (44%)
Frame = -3 / -3
Query: 1321 CGGGTARSPGR*SLARHSSPPCRRHRTSPVTAPWQTPCTSRAP 1193
C G +RSP R S +S PC RHR W C R P
Sbjct: 431 CPGSGSRSPCRSSRRTGTSSPCTRHRHGRRP*TWSRSCRPR*P 303
Score = 21.7 bits (41), Expect(2) = 0.50
Identities = 6/14 (42%), Positives = 7/14 (50%)
Frame = -3 / -2
Query: 1735 WGWPPRRRSCAASC 1694
W W P R+ SC
Sbjct: 546 WAWRPGNRTTKRSC 505
>gb|AW982167.3|AW982167 HVSMEg0002A07f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0002A07f, mRNA sequence
Length = 860
Score = 29.9 bits (59), Expect(2) = 0.50
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -3 / +1
Query: 1270 SSPPCRRHRTSPVTAPWQTPCTSRAPGLP 1184
++PP R R +P + + PC+S +P P
Sbjct: 313 TTPPPARRRWAPTSPSSRAPCSSSSPSAP 399
Score = 24.0 bits (46), Expect(2) = 0.50
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = -2 / +3
Query: 1394 AVASGLLRYPFINCLP 1347
AVA+G+LR F +C P
Sbjct: 237 AVAAGMLRLYFHDCFP 284
>gb|AW983084.3|AW983084 HVSMEg0008A19f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0008A19f, mRNA sequence
Length = 822
Score = 29.9 bits (59), Expect(2) = 0.50
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -3 / +1
Query: 1270 SSPPCRRHRTSPVTAPWQTPCTSRAPGLP 1184
++PP R R +P + + PC+S +P P
Sbjct: 313 TTPPPARRRWAPTSPSSRAPCSSSSPSAP 399
Score = 24.0 bits (46), Expect(2) = 0.50
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = -2 / +3
Query: 1394 AVASGLLRYPFINCLP 1347
AVA+G+LR F +C P
Sbjct: 237 AVAAGMLRLYFHDCFP 284
>gb|AV933308.1|AV933308 AV933308 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal6e08 5', mRNA sequence
Length = 712
Score = 28.6 bits (56), Expect(2) = 0.51
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +3 / +3
Query: 1281 KDHRPGDRAVPPPQPARGD 1337
+DHR G R VPP P R +
Sbjct: 57 EDHRQGPRGVPPRPPRRDE 113
Score = 25.4 bits (49), Expect(2) = 0.51
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +3 / +3
Query: 1359 DERVPQQPGGNGEDHRLG 1412
D R+P++P G H+LG
Sbjct: 117 DARLPRRPRSQGRPHQLG 170
>gb|BI960514.1|BI960514 HVSMEn0024N24f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0024N24f,
mRNA sequence
Length = 653
Score = 29.9 bits (59), Expect(2) = 0.51
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -3 / +1
Query: 1270 SSPPCRRHRTSPVTAPWQTPCTSRAPGLP 1184
++PP R R +P + + PC+S +P P
Sbjct: 316 TTPPPARRRWAPTSPSSRAPCSSSSPSAP 402
Score = 24.0 bits (46), Expect(2) = 0.51
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = -2 / +3
Query: 1394 AVASGLLRYPFINCLP 1347
AVA+G+LR F +C P
Sbjct: 240 AVAAGMLRLYFHDCFP 287
>gb|BJ469060.1|BJ469060 BJ469060 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal12o05 5', mRNA sequence
Length = 646
Score = 28.6 bits (56), Expect(2) = 0.51
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +3 / +3
Query: 1281 KDHRPGDRAVPPPQPARGD 1337
+DHR G R VPP P R +
Sbjct: 45 EDHRQGPRGVPPRPPRRDE 101
Score = 25.4 bits (49), Expect(2) = 0.51
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +3 / +3
Query: 1359 DERVPQQPGGNGEDHRLG 1412
D R+P++P G H+LG
Sbjct: 105 DARLPRRPRSQGRPHQLG 158
>gb|BJ472806.1|BJ472806 BJ472806 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal39b03 5', mRNA sequence
Length = 609
Score = 28.6 bits (56), Expect(2) = 0.51
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +3 / +2
Query: 1281 KDHRPGDRAVPPPQPARGD 1337
+DHR G R VPP P R +
Sbjct: 68 EDHRQGPRGVPPRPPRRDE 124
Score = 25.4 bits (49), Expect(2) = 0.51
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +3 / +2
Query: 1359 DERVPQQPGGNGEDHRLG 1412
D R+P++P G H+LG
Sbjct: 128 DARLPRRPRSQGRPHQLG 181
>gb|CA023822.1|CA023822 HZ47I05r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ47I05
5-PRIME, mRNA sequence
Length = 507
Score = 28.6 bits (56), Expect(2) = 0.52
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +3 / +3
Query: 1281 KDHRPGDRAVPPPQPARGD 1337
+DHR G R VPP P R +
Sbjct: 159 EDHRQGPRGVPPRPPRRDE 215
Score = 25.4 bits (49), Expect(2) = 0.52
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +3 / +3
Query: 1359 DERVPQQPGGNGEDHRLG 1412
D R+P++P G H+LG
Sbjct: 219 DARLPRRPRSQGRPHQLG 272
>gb|BE558554.2|BE558554 HV_CEb0018J07f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0018J07f, mRNA sequence
Length = 687
Score = 28.1 bits (55), Expect(3) = 0.57
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -2 / -2
Query: 1169 PCPSTARGSLARSRSCSSLPMGAAP 1095
P S R S ARSRSCS P P
Sbjct: 350 PWSSAGRSSSARSRSCSRRPPPPPP 276
Score = 24.0 bits (46), Expect(3) = 0.57
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = -3 / -2
Query: 1336 SPRAGCGGGTARSPGR*SLARHSSPPC 1256
S R GC SP R S + ++P C
Sbjct: 686 SSRPGCAARACASPTRASPSTRTTPGC 606
Score = 23.5 bits (45), Expect(3) = 0.57
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -3 / -2
Query: 1246 RTSPVTAPWQTPCTSRA 1196
RT+P APW T T+ A
Sbjct: 623 RTTPGCAPWATRVTAPA 573
>gb|BF255868.2|BF255868 HVSMEf0008A20f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0008A20f, mRNA sequence
Length = 805
Score = 27.6 bits (54), Expect(3) = 0.57
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +3 / -2
Query: 57 PAPPTRPEAASLLSPARNSSLQ 122
PAPP RP PAR S Q
Sbjct: 516 PAPPLRPPPTRARPPARRSGFQ 451
Score = 26.7 bits (52), Expect(3) = 0.57
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +3 / -2
Query: 1260 GGEECRAKDHRPGDRAVPPPQPAR 1331
GG CR D P R P +PAR
Sbjct: 186 GGRSCRR*DPPPRTRRAGPSRPAR 115
Score = 21.7 bits (41), Expect(3) = 0.57
Identities = 7/9 (77%), Positives = 9/9 (100%)
Frame = +1 / -3
Query: 361 AGMRACLGV 387
AG+RAC+GV
Sbjct: 344 AGLRACVGV 318
>gb|AL505065.1|AL505065 AL505065 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW07E12V 5', mRNA sequence
Length = 700
Score = 36.3 bits (73), Expect = 0.58
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = -1 / -2
Query: 1029 RDGQHERHDRDAVPLHQLEHAESVEA 952
RDG+H HD + P HQ EH E+ A
Sbjct: 549 RDGEHRAHDHERRPPHQPEHVEAERA 472
>gb|BF620564.2|BF620564 HVSMEc0020E02f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0020E02f, mRNA sequence
Length = 678
Score = 36.3 bits (73), Expect = 0.58
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +1 / +3
Query: 730 LPYSSGTTGLPKGVMLSHRGLVTSVAQL 813
L YSSGTTG KGV+L+HR + + +
Sbjct: 294 LLYSSGTTGESKGVVLTHRNFIAAATMV 377
>gb|BF255154.2|BF255154 HVSMEf0006B16f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEf0006B16f, mRNA sequence
Length = 602
Score = 36.3 bits (73), Expect = 0.58
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = -3 / -1
Query: 1264 PPCRRHRTSPVTAPWQTPC 1208
PPCRR RT TAP +TPC
Sbjct: 401 PPCRRRRTLAWTAPAETPC 345
>gb|BG342945.1|BG342945 HVSMEg0001G23f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0001G23f, mRNA sequence
Length = 873
Score = 36.3 bits (73), Expect = 0.58
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = +1 / +2
Query: 379 LGVRSGGTVMLLLPNSVEFALAFLACSRLGAAATTANPLHTPPEIAKQAAASGA 540
+G+R G V++ LPN + + L GA + NP EI KQ S A
Sbjct: 137 VGIRKGHVVVVALPNLAVYPVVSLGVMAAGAVFSGVNPRSLAAEIRKQVEDSEA 298
>gb|BE519588.2|BE519588 HV_CEb0016D20f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0016D20f, mRNA sequence
Length = 503
Score = 36.3 bits (73), Expect = 0.58
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = +1 / +2
Query: 730 LPYSSGTTGLPKGVMLSHRG 789
L Y+SGTT PKGV+L HRG
Sbjct: 323 LGYTSGTTSSPKGVVLHHRG 382
>gb|BJ468951.1|BJ468951 BJ468951 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal12c08 5', mRNA sequence
Length = 474
Score = 36.3 bits (73), Expect = 0.58
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = +1 / +2
Query: 730 LPYSSGTTGLPKGVMLSHRG 789
L Y+SGTT PKGV+L HRG
Sbjct: 227 LGYTSGTTSSPKGVVLHHRG 286
>gb|BJ470370.1|BJ470370 BJ470370 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal16n22 5', mRNA sequence
Length = 333
Score = 36.3 bits (73), Expect = 0.58
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = +1 / +3
Query: 730 LPYSSGTTGLPKGVMLSHRG 789
L Y+SGTT PKGV+L HRG
Sbjct: 90 LGYTSGTTSSPKGVVLHHRG 149
>gb|BJ471576.1|BJ471576 BJ471576 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal19g15 5', mRNA sequence
Length = 470
Score = 36.3 bits (73), Expect = 0.58
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = +1 / +2
Query: 730 LPYSSGTTGLPKGVMLSHRG 789
L Y+SGTT PKGV+L HRG
Sbjct: 227 LGYTSGTTSSPKGVVLHHRG 286
>gb|BQ464845.1|BQ464845 HU01M22T HU Hordeum vulgare subsp. vulgare cDNA clone HU01M22
5-PRIME, mRNA sequence
Length = 616
Score = 36.3 bits (73), Expect = 0.58
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = -3 / -1
Query: 1264 PPCRRHRTSPVTAPWQTPCTSRAPGLPLSSHNPV 1163
PPCRR R+SP ++PC R+P L +PV
Sbjct: 151 PPCRRPRSSPPPTTSRSPCRRRSPSD*LYDCSPV 50
>gb|BQ762362.1|BQ762362 EBro01_SQ005_I17_R root, 3 week, hydroponic grown, no treatment, cv
Optic, EBro01 Hordeum vulgare subsp. vulgare cDNA clone
EBro01_SQ005_I17 5', mRNA sequence
Length = 633
Score = 36.3 bits (73), Expect = 0.58
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = -3 / -3
Query: 1264 PPCRRHRTSPVTAPWQTPCTSRAPGLPLSSHNPV 1163
PPCRR R+SP ++PC R+P L +PV
Sbjct: 175 PPCRRPRSSPPPTTSRSPCRRRSPSD*LYDCSPV 74
>gb|BU999899.1|BU999899 HS16N05u HS Hordeum vulgare subsp. vulgare cDNA clone HS16N05
3-PRIME, mRNA sequence
Length = 543
Score = 36.3 bits (73), Expect = 0.58
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = -3 / +2
Query: 1264 PPCRRHRTSPVTAPWQTPCTSRAPGLPLSSHNPV 1163
PPCRR R+SP ++PC R+P L +PV
Sbjct: 413 PPCRRPRSSPPPTTSRSPCRRRSPSD*LYDCSPV 514
>gb|CA005026.1|CA005026 HU12M06u HU Hordeum vulgare subsp. vulgare cDNA clone HU12M06
3-PRIME, mRNA sequence
Length = 551
Score = 36.3 bits (73), Expect = 0.58
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = -3 / +3
Query: 1264 PPCRRHRTSPVTAPWQTPC 1208
PPCRR RT TAP +TPC
Sbjct: 396 PPCRRRRTLAWTAPAETPC 452
>gb|CA005661.1|CA005661 HU09G04u HU Hordeum vulgare subsp. vulgare cDNA clone HU09G04
3-PRIME, mRNA sequence
Length = 502
Score = 36.3 bits (73), Expect = 0.58
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = -3 / +2
Query: 1264 PPCRRHRTSPVTAPWQTPC 1208
PPCRR RT TAP +TPC
Sbjct: 395 PPCRRRRTLAWTAPAETPC 451
>gb|CA007918.1|CA007918 HU09G04r HU Hordeum vulgare subsp. vulgare cDNA clone HU09G04
5-PRIME, mRNA sequence
Length = 535
Score = 36.3 bits (73), Expect = 0.58
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = -3 / -1
Query: 1264 PPCRRHRTSPVTAPWQTPC 1208
PPCRR RT TAP +TPC
Sbjct: 265 PPCRRRRTLAWTAPAETPC 209
>gb|CK124181.1|CK124181 BES1824107f04 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010F047 5-PRIME, mRNA sequence
Length = 916
Score = 36.3 bits (73), Expect = 0.58
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = +1 / +2
Query: 730 LPYSSGTTGLPKGVMLSHRG 789
L Y+SGTT PKGV+L HRG
Sbjct: 578 LGYTSGTTSSPKGVVLHHRG 637
>gb|BI956876.1|BI956876 HVSMEn0005M16f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0005M16f, mRNA sequence
Length = 836
Score = 30.4 bits (60), Expect(2) = 0.62
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -2 / +3
Query: 824 SPSTSCATLVTSPRCDSIT 768
SP+T CAT ++PRC S T
Sbjct: 189 SPTTRCATTRSAPRCTSAT 245
Score = 27.2 bits (53), Expect(2) = 0.62
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = -2 / +3
Query: 71 GWWSWTWIGAMCK 33
GWW W G MC+
Sbjct: 660 GWWRWRGGGGMCR 698
>gb|BE601560.3|BE601560 HVSMEh0098G24f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0098G24f, mRNA sequence
Length = 637
Score = 29.5 bits (58), Expect(2) = 0.64
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -2 / +3
Query: 866 QRTTSSSRKWRFGLSPSTSCATLVTSPRCDSITP 765
+R S R WR G S + +T ++ RC S TP
Sbjct: 456 RRWRSGRRSWRRGWSGCRTPSTACSARRCGSATP 557
Score = 27.6 bits (54), Expect(2) = 0.64
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = -2 / +3
Query: 1676 ATYCLISSSVIPEPPDATTNATGISPQESS 1587
+T C +SS P PP AT + P SS
Sbjct: 300 STQCPLSSPSSPNPPPATRSTPRTRPSASS 389
>gb|CK122304.1|CK122304 BES1824102n01 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010N012 5-PRIME, mRNA sequence
Length = 636
Score = 29.5 bits (58), Expect(2) = 0.64
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -2 / +1
Query: 866 QRTTSSSRKWRFGLSPSTSCATLVTSPRCDSITP 765
+R S R WR G S + +T ++ RC S TP
Sbjct: 175 RRWRSGRRSWRRGWSGCRTPSTACSARRCGSATP 276
Score = 27.6 bits (54), Expect(2) = 0.64
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = -2 / +1
Query: 1676 ATYCLISSSVIPEPPDATTNATGISPQESS 1587
+T C +SS P PP AT + P SS
Sbjct: 19 STQCPLSSPSSPNPPPATRSTPRTRPSASS 108
>gb|BF620342.2|BF620342 HVSMEc0019I13f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0019I13f, mRNA sequence
Length = 874
Score = 31.8 bits (63), Expect(2) = 0.64
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -2 / -1
Query: 416 RSSITVPPLRTPRQARIPAATRRD 345
+S+ +PP R P +RIP TRRD
Sbjct: 244 QSASPLPPSRAPAPSRIPGETRRD 173
Score = 25.8 bits (50), Expect(2) = 0.64
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = -2 / -3
Query: 812 SCATLVTSPRCDSITPLGSPV 750
+C+T+ T+ C PL SP+
Sbjct: 530 NCSTITTAEGCFGAIPLSSPI 468
>gb|BI951808.1|BI951808 HVSMEm0003A02f Hordeum vulgare green seedling EST library
HVcDNA0014 (Blumeria infected) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEm0003A02f, mRNA sequence
Length = 902
Score = 30.9 bits (61), Expect(2) = 0.66
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +3 / -1
Query: 33 LAHSSDPGPAPPTRPEAASLLSPAR 107
L S P PAPP RP A +PAR
Sbjct: 827 LPPSWHPAPAPPVRPTAPPAAAPAR 753
Score = 27.2 bits (53), Expect(2) = 5.3
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -1 / -1
Query: 1122 QLLAHGRGPRDDHAHRR 1072
QLL HGRG R D H R
Sbjct: 167 QLLLHGRGGRPDGRHPR 117
Score = 27.2 bits (53), Expect(2) = 5.3
Identities = 11/36 (30%), Positives = 14/36 (38%)
Frame = -3 / -2
Query: 1273 HSSPPCRRHRTSPVTAPWQTPCTSRAPGLPLSSHNP 1166
H PP R R P P + LP ++H P
Sbjct: 661 HQRPPAARPRPPPAPRPREGGAPPPPAALPRAAHRP 554
Score = 26.7 bits (52), Expect(2) = 0.66
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +2 / -2
Query: 1271 MPS*RSSTRRPGCPSTATSP 1330
+P R RPGCPS A P
Sbjct: 778 LPPPRPPRARPGCPSPAAPP 719
>gb|BI949465.1|BI949465 HVSMEl0014A18f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0014A18f, mRNA sequence
Length = 936
Score = 29.0 bits (57), Expect(2) = 0.67
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +1 / +3
Query: 736 YSSGTTGLPKGVMLSHRGLVT 798
++SGTT PKGV L+H L T
Sbjct: 192 HTSGTTSRPKGVPLTHFNLRT 254
Score = 24.4 bits (47), Expect(2) = 0.67
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +1 / +3
Query: 868 VLPMFHVYSLHSILLCGMRAGAAL 939
VLP+FHV+ L + LL + + AA+
Sbjct: 312 VLPLFHVHGLVAGLLRSLVSRAAV 383
>gb|BF065831.1|BF065831 HV_CEb0014B20f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0014B20f, mRNA sequence
Length = 924
Score = 31.3 bits (62), Expect(2) = 0.67
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -3 / +1
Query: 1270 SSPPCRRHRTSPVTAPWQTPCTSRAPGLPLSS 1175
++PPC RT+ TA W+ P SR P SS
Sbjct: 448 AAPPCPPPRTTTPTARWRRPWWSRFSRWPPSS 543
Score = 22.1 bits (42), Expect(2) = 0.67
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -3 / +1
Query: 1420 ATPPSRWSSPLPP 1382
+TPPS S+P PP
Sbjct: 304 STPPSWRSTPSPP 342
>gb|CB875043.1|CB875043 HX07B20w HX Hordeum vulgare subsp. vulgare cDNA clone HX07B20
3-PRIME, mRNA sequence
Length = 669
Score = 26.7 bits (52), Expect(2) = 0.69
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = -1 / -2
Query: 1230 RLLGKRHAHREHRACLCHPITLSEHGARELGAQQVLQLLAH 1108
R + +RH EHRA + H R+ G + LLAH
Sbjct: 362 RHVRRRHKPGEHRAGIEHRACARRRVERQRGGRDRHHLLAH 240
Score = 26.7 bits (52), Expect(2) = 0.69
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -3 / -1
Query: 1339 KSPRAGCGGGTARSPGR 1289
++ R GCGGG R+P R
Sbjct: 405 RAGRRGCGGGPRRAPPR 355
>gb|CA029809.1|CA029809 HX05E12r HX Hordeum vulgare subsp. vulgare cDNA clone HX05E12
5-PRIME, mRNA sequence
Length = 625
Score = 26.7 bits (52), Expect(2) = 0.69
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = -1 / -1
Query: 1230 RLLGKRHAHREHRACLCHPITLSEHGARELGAQQVLQLLAH 1108
R + +RH EHRA + H R+ G + LLAH
Sbjct: 244 RHVRRRHKPGEHRAGIEHRACARRRVERQRGGRDRHHLLAH 122
Score = 26.7 bits (52), Expect(2) = 0.69
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -3 / -3
Query: 1339 KSPRAGCGGGTARSPGR 1289
++ R GCGGG R+P R
Sbjct: 287 RAGRRGCGGGPRRAPPR 237
>gb|BQ458684.1|BQ458684 HA04I03r HA Hordeum vulgare subsp. vulgare cDNA clone HA04I03
5-PRIME, mRNA sequence
Length = 597
Score = 26.7 bits (52), Expect(2) = 0.69
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = -1 / -2
Query: 1230 RLLGKRHAHREHRACLCHPITLSEHGARELGAQQVLQLLAH 1108
R + +RH EHRA + H R+ G + LLAH
Sbjct: 350 RHVRRRHKPGEHRAGIEHRACARRRVERQRGGRDRHHLLAH 228
Score = 26.7 bits (52), Expect(2) = 0.69
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -3 / -1
Query: 1339 KSPRAGCGGGTARSPGR 1289
++ R GCGGG R+P R
Sbjct: 393 RAGRRGCGGGPRRAPPR 343
>gb|AL499828.1|AL499828 AL499828 Hordeum vulgare Barke etiolated leaves Hordeum vulgare
subsp. vulgare cDNA clone HK03K03r 3', mRNA sequence
Length = 646
Score = 35.9 bits (72), Expect = 0.79
Identities = 19/55 (34%), Positives = 23/55 (41%)
Frame = -2 / +3
Query: 200 RNTVVSACGSVGDTIFFRSGGGVRVALEAGVTCRRQEACCFRPGWWSWTWIGAMC 36
R V A G GGG R+ L A RRQE R G W W+ ++C
Sbjct: 180 RREAVRAAGGAAGAGG*ARGGGARLVLAARPRRRRQEPSEIRKGTWCWSAPCSVC 344
>gb|BF631467.2|BF631467 HVSMEb0016A16f Hordeum vulgare seedling shoot EST library HVcDNA0002
(Dehydration stress) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEb0016A16f, mRNA sequence
Length = 906
Score = 35.9 bits (72), Expect = 0.79
Identities = 14/62 (22%), Positives = 32/62 (51%)
Frame = +1 / +3
Query: 1594 SCGEIPVAFVVASGGSGITEDEIKQYVAKQVVFYKRLHKIFFVEAIPKAPSGKILRKDLR 1773
+C + + SG ++E+E+ + ++ + K+ FV+ +PK +GK+ + LR
Sbjct: 3 ACAFVTLKKEFDSGAGEVSEEELVAFCRSKMAHFMVPRKVVFVDELPKNATGKVQKLALR 182
Query: 1774 AK 1779
+
Sbjct: 183 ER 188
>gb|BG344320.1|BG344320 HVSMEg0008M22f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0008M22f, mRNA sequence
Length = 793
Score = 35.9 bits (72), Expect = 0.79
Identities = 16/35 (45%), Positives = 18/35 (51%)
Frame = -3 / -2
Query: 1342 CKSPRAGCGGGTARSPGR*SLARHSSPPCRRHRTS 1238
C GC G AR+ G S R + PPCRR R S
Sbjct: 147 CPGSSRGCRGSGARAVGGCSCRR*TGPPCRRCRRS 43
>gb|BG365831.1|BG365831 HVSMEi0004G10f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0004G10f, mRNA sequence
Length = 484
Score = 35.9 bits (72), Expect = 0.79
Identities = 16/35 (45%), Positives = 18/35 (51%)
Frame = -3 / -1
Query: 1342 CKSPRAGCGGGTARSPGR*SLARHSSPPCRRHRTS 1238
C GC G AR+ G S R + PPCRR R S
Sbjct: 388 CPGSSRGCRGSGARAVGGCSCRR*TGPPCRRCRRS 284
>gb|BE214050.2|BE214050 HV_CEb0002A10f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0002A10f, mRNA sequence
Length = 712
Score = 35.9 bits (72), Expect = 0.79
Identities = 17/43 (39%), Positives = 19/43 (44%)
Frame = -3 / -1
Query: 1321 CGGGTARSPGR*SLARHSSPPCRRHRTSPVTAPWQTPCTSRAP 1193
C G +RSP R S +S PC RHR W C R P
Sbjct: 475 CPGSGSRSPCRSSRRTGTSSPCTRHRHGRRP*TWSRSCRPR*P 347
>gb|BG300498.2|BG300498 HVSMEb0017E07f Hordeum vulgare seedling shoot EST library HVcDNA0002
(Dehydration stress) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEb0017E07f, mRNA sequence
Length = 914
Score = 35.9 bits (72), Expect = 0.79
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -3 / +1
Query: 1270 SSPPCRRHRTSPVTAPWQTPCTSRAPGLP 1184
++ P R R+ TAPW+ PC S +P P
Sbjct: 268 AAAPPPRRRSRSTTAPWRAPCASASPSRP 354
>gb|BG344700.2|BG344700 HVSMEg0015E05f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0015E05f, mRNA sequence
Length = 869
Score = 35.9 bits (72), Expect = 0.79
Identities = 17/43 (39%), Positives = 19/43 (44%)
Frame = -3 / -1
Query: 1321 CGGGTARSPGR*SLARHSSPPCRRHRTSPVTAPWQTPCTSRAP 1193
C G +RSP R S +S PC RHR W C R P
Sbjct: 461 CPGSGSRSPCRSSRRTGTSSPCTRHRHGRRP*TWSRSCRPR*P 333
>gb|BJ473108.1|BJ473108 BJ473108 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal38b23 5', mRNA sequence
Length = 598
Score = 35.9 bits (72), Expect = 0.79
Identities = 17/43 (39%), Positives = 19/43 (44%)
Frame = -3 / -2
Query: 1321 CGGGTARSPGR*SLARHSSPPCRRHRTSPVTAPWQTPCTSRAP 1193
C G +RSP R S +S PC RHR W C R P
Sbjct: 447 CPGSGSRSPCRSSRRTGTSSPCTRHRHGRRP*TWSRSCRPR*P 319
>gb|BM097757.2|BM097757 EBem04_SQ002_J19_R embryo, 12 DPA, no treatment, cv Optic, EBem04
Hordeum vulgare subsp. vulgare cDNA clone
EBem04_SQ002_J19 5', mRNA sequence
Length = 438
Score = 35.9 bits (72), Expect = 0.79
Identities = 15/56 (26%), Positives = 26/56 (46%)
Frame = -2 / -3
Query: 953 RFMITSAAPARIPHSRMECSEYTWNMGSTQRTTSSSRKWRFGLSPSTSCATLVTSP 786
R ++ S +P SR +CS ++ M T + W +S + SC T+ +P
Sbjct: 268 RILLASCSPCLSVASRHDCSVSSFCMDGLSLGTMAKPSWNSSMSSAASCHTIAPAP 101
>gb|BU980077.1|BU980077 HA18H11r HA Hordeum vulgare subsp. vulgare cDNA clone HA18H11
5-PRIME, mRNA sequence
Length = 508
Score = 35.9 bits (72), Expect = 0.79
Identities = 17/43 (39%), Positives = 19/43 (44%)
Frame = -3 / -3
Query: 1321 CGGGTARSPGR*SLARHSSPPCRRHRTSPVTAPWQTPCTSRAP 1193
C G +RSP R S +S PC RHR W C R P
Sbjct: 446 CPGSGSRSPCRSSRRTGTSSPCTRHRHGRRP*TWSRSCRPR*P 318
>gb|BU994106.1|BU994106 HM05M03r HM Hordeum vulgare subsp. vulgare cDNA clone HM05M03
5-PRIME, mRNA sequence
Length = 648
Score = 35.9 bits (72), Expect = 0.79
Identities = 17/43 (39%), Positives = 19/43 (44%)
Frame = -3 / -2
Query: 1321 CGGGTARSPGR*SLARHSSPPCRRHRTSPVTAPWQTPCTSRAP 1193
C G +RSP R S +S PC RHR W C R P
Sbjct: 359 CPGSGSRSPCRSSRRTGTSSPCTRHRHGRRP*TWSRSCRPR*P 231
>gb|BU995847.1|BU995847 HM11I22r HM Hordeum vulgare subsp. vulgare cDNA clone HM11I22
5-PRIME, mRNA sequence
Length = 564
Score = 35.9 bits (72), Expect = 0.79
Identities = 17/43 (39%), Positives = 19/43 (44%)
Frame = -3 / -2
Query: 1321 CGGGTARSPGR*SLARHSSPPCRRHRTSPVTAPWQTPCTSRAP 1193
C G +RSP R S +S PC RHR W C R P
Sbjct: 485 CPGSGSRSPCRSSRRTGTSSPCTRHRHGRRP*TWSRSCRPR*P 357
>gb|CA012108.1|CA012108 HT04H12r HT Hordeum vulgare subsp. vulgare cDNA clone HT04H12
5-PRIME, mRNA sequence
Length = 512
Score = 35.9 bits (72), Expect = 0.79
Identities = 16/29 (55%), Positives = 20/29 (68%)
Frame = -2 / +2
Query: 1490 SSLSRSTMKISSPSSTYPMSPVCSHPSES 1404
+SLSRST+ SSP+ST P + HPS S
Sbjct: 287 TSLSRSTLTSSSPTSTVPSPLI*PHPSAS 373
>gb|CA016846.1|CA016846 HV05L18u HV Hordeum vulgare subsp. vulgare cDNA clone HV05L18
3-PRIME, mRNA sequence
Length = 459
Score = 35.9 bits (72), Expect = 0.79
Identities = 15/56 (26%), Positives = 26/56 (46%)
Frame = -2 / +1
Query: 953 RFMITSAAPARIPHSRMECSEYTWNMGSTQRTTSSSRKWRFGLSPSTSCATLVTSP 786
R ++ S +P SR +CS ++ M T + W +S + SC T+ +P
Sbjct: 151 RILLASCSPCLSVASRHDCSVSSFCMDGLSLGTMAKPSWNSSMSSAASCHTIAPAP 318
>gb|CA017047.1|CA017047 HV05C16u HV Hordeum vulgare subsp. vulgare cDNA clone HV05C16
3-PRIME, mRNA sequence
Length = 530
Score = 35.9 bits (72), Expect = 0.79
Identities = 15/56 (26%), Positives = 26/56 (46%)
Frame = -2 / +1
Query: 953 RFMITSAAPARIPHSRMECSEYTWNMGSTQRTTSSSRKWRFGLSPSTSCATLVTSP 786
R ++ S +P SR +CS ++ M T + W +S + SC T+ +P
Sbjct: 151 RILLASCSPCLSVASRHDCSVSSFCMDGLSLGTMAKPSWNSSMSSAASCHTIAPAP 318
Database: Hordeum_nucl_with_EST.fasta
Posted date: May 2, 2006 2:38 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 789,431,654
Number of Sequences: 312970
Number of extensions: 13954313
Number of successful extensions: 197746
Number of sequences better than 10.0: 1233
length of database: 58,378,179
effective HSP length: 54
effective length of database: 41,477,799
effective search space used: 25177023993
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)