TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 4695478.2.1
(1201 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BJ457744.1|BJ457744 BJ457744 K. Sato unpublished cDNA li... 253 5e-088
gb|BJ450325.1|BJ450325 BJ450325 K. Sato unpublished cDNA li... 275 2e-083
gb|BF066116.1|BF066116 HV_CEb0014O07f Hordeum vulgare seedl... 179 9e-077
gb|BF066138.1|BF066138 HV_CEb0014P07f Hordeum vulgare seedl... 179 9e-077
gb|BE195648.3|BE195648 HVSMEh0090A21f Hordeum vulgare 5-45 ... 225 8e-076
gb|BG365391.1|BG365391 HVSMEi0002I06f Hordeum vulgare 20 DA... 161 2e-072
gb|BJ452084.1|BJ452084 BJ452084 K. Sato unpublished cDNA li... 138 4e-071
gb|BJ464456.1|BJ464456 BJ464456 K. Sato unpublished cDNA li... 170 7e-067
gb|BE559021.2|BE559021 HV_CEb0022F12f Hordeum vulgare seedl... 138 5e-064
gb|BJ463463.1|BJ463463 BJ463463 K. Sato unpublished cDNA li... 138 1e-062
gb|BJ464137.1|BJ464137 BJ464137 K. Sato unpublished cDNA li... 138 5e-062
gb|BU988879.1|BU988879 HF18P19r HF Hordeum vulgare subsp. v... 225 2e-061
gb|AL506722.1|AL506722 AL506722 Hordeum vulgare Barke devel... 138 8e-061
gb|BG367870.1|BG367870 HVSMEi0014B22f Hordeum vulgare 20 DA... 204 1e-058
gb|BU989165.1|BU989165 HF19P19r HF Hordeum vulgare subsp. v... 225 5e-058
gb|AV836450.1|AV836450 AV836450 K. Sato unpublished cDNA li... 190 2e-057
gb|CA013907.1|CA013907 HT09N23r HT Hordeum vulgare subsp. v... 180 1e-054
gb|BE196376.3|BE196376 HVSMEh0092C03f Hordeum vulgare 5-45 ... 165 2e-054
gb|BJ469082.1|BJ469082 BJ469082 K. Sato unpublished cDNA li... 101 2e-054
gb|BM816674.1|BM816674 HB01C06_T3.ab1 HB Hordeum vulgare su... 129 5e-054
gb|BJ468735.1|BJ468735 BJ468735 K. Sato unpublished cDNA li... 163 8e-052
gb|AW983188.3|AW983188 HVSMEg0008J14f Hordeum vulgare pre-a... 151 2e-051
gb|BI948507.1|BI948507 HVSMEl0009O08f Hordeum vulgare spike... 153 4e-051
gb|AV915311.1|AV915311 AV915311 K. Sato unpublished cDNA li... 138 5e-051
gb|AV918145.1|AV918145 AV918145 K. Sato unpublished cDNA li... 182 7e-051
gb|AV836954.1|AV836954 AV836954 K. Sato unpublished cDNA li... 109 7e-050
gb|BF255832.2|BF255832 HVSMEf0007P02f Hordeum vulgare seedl... 113 3e-049
gb|BU986537.1|BU986537 HF12C17r HF Hordeum vulgare subsp. v... 113 3e-049
gb|BQ470739.1|BQ470739 HX03O06r HX Hordeum vulgare subsp. v... 113 3e-049
gb|AV836830.1|AV836830 AV836830 K. Sato unpublished cDNA li... 194 6e-049
gb|CA032017.1|CA032017 HX11M09r HX Hordeum vulgare subsp. v... 135 8e-049
gb|BJ466618.1|BJ466618 BJ466618 K. Sato unpublished cDNA li... 175 8e-049
gb|BJ466412.1|BJ466412 BJ466412 K. Sato unpublished cDNA li... 175 8e-049
gb|AV914084.1|AV914084 AV914084 K. Sato unpublished cDNA li... 182 1e-048
gb|BE215014.1|BE215014 HV_CEb0005I17f Hordeum vulgare seedl... 137 2e-048
gb|AV913397.1|AV913397 AV913397 K. Sato unpublished cDNA li... 138 5e-048
gb|AV920406.1|AV920406 AV920406 K. Sato unpublished cDNA li... 172 8e-048
gb|AV919693.1|AV919693 AV919693 K. Sato unpublished cDNA li... 172 8e-048
gb|AV918687.1|AV918687 AV918687 K. Sato unpublished cDNA li... 172 8e-048
gb|CA031581.1|CA031581 HX10G17r HX Hordeum vulgare subsp. v... 135 1e-047
gb|AV913390.1|AV913390 AV913390 K. Sato unpublished cDNA li... 138 1e-047
gb|AV914608.1|AV914608 AV914608 K. Sato unpublished cDNA li... 138 3e-047
gb|CA007645.1|CA007645 HU08J12r HU Hordeum vulgare subsp. v... 138 5e-047
gb|BE602876.2|BE602876 HVSMEh0100H17f Hordeum vulgare 5-45 ... 138 5e-047
gb|AV919125.1|AV919125 AV919125 K. Sato unpublished cDNA li... 169 7e-047
gb|BM097482.2|BM097482 EBro05_SQ003_L07_R root, 3 week, red... 184 9e-046
gb|AW982651.2|AW982651 HVSMEg0003N13f Hordeum vulgare pre-a... 101 3e-045
gb|BG369084.2|BG369084 HVSMEi0021K17f Hordeum vulgare 20 DA... 130 8e-045
gb|BI960557.1|BI960557 HVSMEn0025A09f Hordeum vulgare rachi... 132 8e-044
gb|BG344152.2|BG344152 HVSMEg0007N17f Hordeum vulgare pre-a... 132 1e-043
gb|CA007077.1|CA007077 HU06K19r HU Hordeum vulgare subsp. v... 130 5e-043
gb|BI960699.1|BI960699 HVSMEn0025O19f Hordeum vulgare rachi... 121 5e-043
gb|BG301229.1|BG301229 HVSMEb0020B01f Hordeum vulgare seedl... 131 6e-043
gb|CA013420.1|CA013420 HT08G10r HT Hordeum vulgare subsp. v... 112 6e-042
gb|CA019777.1|CA019777 HV13C06r HV Hordeum vulgare subsp. v... 124 1e-041
gb|BQ766677.1|BQ766677 EBro08_SQ006_F23_R root, 3 week, dro... 107 2e-041
gb|BF064595.2|BF064595 HV_CEb0016A19f Hordeum vulgare seedl... 169 2e-041
gb|CV063066.1|CV063066 BNEL86c3 Barley EST endosperm librar... 149 4e-041
gb|BI958105.1|BI958105 HVSMEn0013G15f Hordeum vulgare rachi... 132 1e-040
gb|BQ763369.1|BQ763369 EBro02_SQ008_J04_R root, 3 week, hyd... 132 6e-039
gb|BU985911.1|BU985911 HF08P24r HF Hordeum vulgare subsp. v... 134 2e-038
gb|BF263685.3|BF263685 HV_CEa0007G08f Hordeum vulgare seedl... 122 2e-038
gb|CA023572.1|CA023572 HZ46L02r HZ Hordeum vulgare subsp. v... 138 3e-038
gb|BU980008.1|BU980008 HA18D04r HA Hordeum vulgare subsp. v... 158 7e-038
gb|CA003151.1|CA003151 HS09J04r HS Hordeum vulgare subsp. v... 158 7e-038
gb|CV054175.1|CV054175 BNEL107f1 Barley EST endosperm libra... 138 1e-037
gb|CA011608.1|CA011608 HT03A12r HT Hordeum vulgare subsp. v... 138 2e-037
gb|BM369883.2|BM369883 EBem07_SQ004_O04_R embryo, 28 DPA, n... 139 4e-037
gb|BE454948.2|BE454948 HVSMEh0095J23f Hordeum vulgare 5-45 ... 125 9e-037
gb|BI959031.1|BI959031 HVSMEn0017M21f Hordeum vulgare rachi... 98 1e-036
gb|BE456124.3|BE456124 HVSMEg0019N22f Hordeum vulgare pre-a... 79 1e-035
gb|CB879567.1|CB879567 HP02M04w HP Hordeum vulgare subsp. v... 133 2e-035
gb|CB876883.1|CB876883 HP02M04T HP Hordeum vulgare subsp. v... 133 2e-035
gb|AL505150.1|AL505150 AL505150 Hordeum vulgare Barke roots... 68 4e-035
gb|BG415622.2|BG415622 HVSMEk0007D09f Hordeum vulgare testa... 75 5e-034
gb|AV934049.1|AV934049 AV934049 K. Sato unpublished cDNA li... 67 9e-034
gb|CA014495.1|CA014495 HT11I05r HT Hordeum vulgare subsp. v... 118 5e-033
gb|BE214863.2|BE214863 HV_CEb0004O14f Hordeum vulgare seedl... 140 1e-032
gb|BQ767762.1|BQ767762 EBro08_SQ009_D21 _R root, 3 week, dr... 118 1e-032
gb|BI958316.1|BI958316 HVSMEn0014G04f Hordeum vulgare rachi... 117 1e-031
gb|BE214157.3|BE214157 HV_CEb0002H13f Hordeum vulgare seedl... 117 2e-031
gb|BI958862.1|BI958862 HVSMEn0016O20f Hordeum vulgare rachi... 132 5e-031
gb|AV934152.1|AV934152 AV934152 K. Sato unpublished cDNA li... 64 6e-031
gb|BQ460124.1|BQ460124 HA07C19r HA Hordeum vulgare subsp. v... 65 8e-031
gb|BU986380.1|BU986380 HF11K09r HF Hordeum vulgare subsp. v... 65 8e-031
gb|BQ467571.1|BQ467571 HS04D07r HS Hordeum vulgare subsp. v... 65 8e-031
gb|AL505019.1|AL505019 AL505019 Hordeum vulgare Barke roots... 103 1e-030
gb|AV913567.1|AV913567 AV913567 K. Sato unpublished cDNA li... 65 1e-030
gb|AV926665.1|AV926665 AV926665 K. Sato unpublished cDNA li... 65 1e-030
gb|BI957284.1|BI957284 HVSMEn0008K05f Hordeum vulgare rachi... 129 4e-030
gb|CA027702.1|CA027702 HZ59M02r HZ Hordeum vulgare subsp. v... 132 5e-030
gb|BQ763022.1|BQ763022 EBro02_SQ006_M20_R root, 3 week, hyd... 65 6e-030
gb|BQ464700.1|BQ464700 HU01A05T HU Hordeum vulgare subsp. v... 114 1e-029
gb|BI777845.2|BI777845 EBro08_SQ002_E16_R root, 3 week, dro... 63 2e-029
gb|BI958488.1|BI958488 HVSMEn0015E11f Hordeum vulgare rachi... 129 2e-029
gb|AL503986.1|AL503986 AL503986 Hordeum vulgare Barke roots... 103 2e-029
gb|BI957975.1|BI957975 HVSMEn0012L23f Hordeum vulgare rachi... 121 3e-029
gb|BI959591.1|BI959591 HVSMEn0020F03f Hordeum vulgare rachi... 129 3e-029
gb|CV057862.1|CV057862 BNEL31f4 Barley EST endosperm librar... 120 4e-029
gb|BU973416.1|BU973416 HB24O01r BC Hordeum vulgare subsp. v... 59 9e-029
gb|AV931570.1|AV931570 AV931570 K. Sato unpublished cDNA li... 115 1e-028
gb|BI955632.1|BI955632 HVSMEm0023N15f Hordeum vulgare green... 57 2e-028
gb|BF253936.2|BF253936 HVSMEf0002I16f Hordeum vulgare seedl... 65 2e-028
gb|AV925423.1|AV925423 AV925423 K. Sato unpublished cDNA li... 104 2e-028
gb|CV063107.1|CV063107 BNEL86g1 Barley EST endosperm librar... 106 4e-028
gb|CA020126.1|CA020126 HV14G15r HV Hordeum vulgare subsp. v... 65 4e-028
gb|BU996119.1|BU996119 HM12I01r HM Hordeum vulgare subsp. v... 95 4e-028
gb|AV936300.1|AV936300 AV936300 K. Sato unpublished cDNA li... 112 7e-028
gb|BF263684.3|BF263684 HV_CEa0007G07f Hordeum vulgare seedl... 120 7e-028
gb|BI956546.1|BI956546 HVSMEn0004B08f Hordeum vulgare rachi... 69 8e-028
gb|BG310404.1|BG310404 HVSMEc0018H08f Hordeum vulgare seedl... 87 1e-027
gb|BE060930.3|BE060930 HVSMEg0013N24f Hordeum vulgare pre-a... 53 2e-027
gb|BU989665.1|BU989665 HF22F21r HF Hordeum vulgare subsp. v... 123 2e-027
gb|AV936403.1|AV936403 AV936403 K. Sato unpublished cDNA li... 109 4e-027
gb|BJ474296.1|BJ474296 BJ474296 K. Sato unpublished cDNA li... 96 6e-027
gb|BQ763205.1|BQ763205 EBro02_SQ007_F14_R root, 3 week, hyd... 121 1e-026
gb|BJ544054.1|BJ544054 BJ544054 K. Sato unpublished cDNA li... 64 2e-026
gb|BI960410.1|BI960410 HVSMEn0024I04f Hordeum vulgare rachi... 120 2e-026
gb|BJ459644.1|BJ459644 BJ459644 K. Sato unpublished cDNA li... 90 2e-026
gb|AV911222.1|AV911222 AV911222 K. Sato unpublished cDNA li... 109 4e-026
gb|BQ467242.1|BQ467242 HS03C04r HS Hordeum vulgare subsp. v... 118 5e-026
gb|BU987846.1|BU987846 HF15O20r HF Hordeum vulgare subsp. v... 118 5e-026
gb|CA001675.1|CA001675 HS05E05r HS Hordeum vulgare subsp. v... 118 5e-026
gb|BG369168.1|BG369168 HVSMEi0022M03f Hordeum vulgare 20 DA... 103 1e-025
gb|BI958460.1|BI958460 HVSMEn0015C07f Hordeum vulgare rachi... 116 2e-025
gb|BE196379.3|BE196379 HVSMEh0092C06f Hordeum vulgare 5-45 ... 65 2e-025
gb|BQ459797.1|BQ459797 HA08A23r HA Hordeum vulgare subsp. v... 65 2e-025
gb|BF628107.2|BF628107 HVSMEb0003C11f Hordeum vulgare seedl... 65 2e-025
gb|CA002692.1|CA002692 HS08E02r HS Hordeum vulgare subsp. v... 65 2e-025
gb|CA021911.1|CA021911 HZ41I09r HZ Hordeum vulgare subsp. v... 65 2e-025
gb|BU980158.1|BU980158 HA18N13r HA Hordeum vulgare subsp. v... 65 2e-025
gb|BF265665.2|BF265665 HV_CEa0013A06f Hordeum vulgare seedl... 64 4e-025
gb|AV935958.1|AV935958 AV935958 K. Sato unpublished cDNA li... 90 7e-025
gb|BE214986.2|BE214986 HV_CEb0005H03f Hordeum vulgare seedl... 88 7e-025
gb|BF259786.2|BF259786 HVSMEf0020E05f Hordeum vulgare seedl... 61 7e-025
gb|BQ464838.1|BQ464838 HU01M14T HU Hordeum vulgare subsp. v... 114 9e-025
gb|CA004585.1|CA004585 HS18B01r HS Hordeum vulgare subsp. v... 114 9e-025
gb|CA007861.1|CA007861 HU09D12r HU Hordeum vulgare subsp. v... 114 9e-025
gb|CA015399.1|CA015399 HT14D04r HT Hordeum vulgare subsp. v... 114 9e-025
gb|CA004617.1|CA004617 HS18C15r HS Hordeum vulgare subsp. v... 65 1e-024
gb|CK122370.1|CK122370 BES1824103a12 BES1824 Hordeum vulgar... 113 2e-024
gb|BG343982.1|BG343982 HVSMEg0007E19f Hordeum vulgare pre-a... 113 2e-024
gb|AV936413.1|AV936413 AV936413 K. Sato unpublished cDNA li... 112 4e-024
gb|BI776330.2|BI776330 EBem04_SQ001_K08_R embryo, 12 DPA, n... 92 6e-024
gb|CA006616.1|CA006616 HU05D06r HU Hordeum vulgare subsp. v... 81 8e-024
gb|BQ467661.1|BQ467661 HS04H17r HS Hordeum vulgare subsp. v... 111 8e-024
gb|BI950770.1|BI950770 HVSMEl0023C06f Hordeum vulgare spike... 102 8e-024
gb|BE454559.2|BE454559 HVSMEh0094E03f Hordeum vulgare 5-45 ... 64 8e-024
gb|AL450961.1|AL450961 AL450961 Hordeum vulgare Barke etiol... 45 3e-023
gb|BG366287.1|BG366287 HVSMEi0006J10f Hordeum vulgare 20 DA... 64 5e-023
gb|CA010479.1|CA010479 HT09N23u HT Hordeum vulgare subsp. v... 90 1e-022
gb|BU986605.1|BU986605 HF12G04r HF Hordeum vulgare subsp. v... 107 1e-022
gb|BQ763026.1|BQ763026 EBro02_SQ006_N19_R root, 3 week, hyd... 63 2e-022
gb|BM442873.2|BM442873 EBro02_SQ001_K13_R root, 3 week, hyd... 63 2e-022
gb|BF265663.2|BF265663 HV_CEa0013A04f Hordeum vulgare seedl... 64 5e-022
gb|BI958620.1|BI958620 HVSMEn0015P02f Hordeum vulgare rachi... 105 7e-022
gb|CK124748.1|CK124748 BES1824110d17 BES1824 Hordeum vulgar... 52 2e-021
gb|BG416654.1|BG416654 HVSMEk0014A07f Hordeum vulgare testa... 52 3e-021
gb|BF258617.2|BF258617 HVSMEf0016D02f Hordeum vulgare seedl... 65 3e-021
gb|BG418564.2|BG418564 HVSMEk0023C20f Hordeum vulgare testa... 52 5e-021
gb|BQ465481.1|BQ465481 HU03M08r HU Hordeum vulgare subsp. v... 79 7e-021
gb|BM375203.2|BM375203 EBem06_SQ002_K13_R embryo, 21 DPA, n... 101 9e-021
>gb|BJ457744.1|BJ457744 BJ457744 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak29b22 3', mRNA sequence
Length = 633
Score = 253 bits (548), Expect(2) = 5e-088
Identities = 96/126 (76%), Positives = 115/126 (91%)
Frame = -2 / -3
Query: 657 DENCWSDKEFCRNEENWYSVAKISSEEAALEYAKQTGLDVVTVNPAVVFGPLLQPTLNTS 478
DE+CWSDKEFCR+ ++WY VAKI++E AALEY ++TGL VVT+NPA+VFGPLLQPT+NTS
Sbjct: 631 DESCWSDKEFCRSNQSWYPVAKIAAEAAALEYGRETGLGVVTLNPALVFGPLLQPTINTS 452
Query: 477 CQFLVYFLKGGPDRMRDKLWHIVDVRDTADALLLVYETPQASGRHICAPHFISARDLLEL 298
QFL+YFL+GGPD RDKLWHIVDVRD ADALLL+YE P+A+GRHICAPHFI+AR+LL L
Sbjct: 451 SQFLIYFLRGGPDETRDKLWHIVDVRDVADALLLLYEAPEATGRHICAPHFITARELLGL 272
Query: 297 LKTMYP 280
LK+MYP
Sbjct: 271 LKSMYP 254
Score = 157 bits (337), Expect(2) = 2e-049
Identities = 77/115 (66%), Positives = 82/115 (71%)
Frame = +2 / +3
Query: 314 RALMK*GAQMCLPEACGVSYTSRRASAVSLTSTMCQSLSLIRSGPPFRK*TRN*QLVLSV 493
RA+MK*GAQMCLP A G S + ASA S TSTMC SLSL+ SGPP RK* RN LVL V
Sbjct: 288 RAVMK*GAQMCLPVASGAS*SRSSASATSRTSTMCHSLSLVSSGPPLRK*MRNWLLVLMV 467
Query: 494 GCRRGPKTTAGLTVTTSSPVCFAYSSAASSDEILATEYQFSSFLQNSLSDQQFSS 658
G RGP T+AG VTT SPV YSSAA+S ILAT YQ LQNSLSDQQ SS
Sbjct: 468 GWSRGPNTSAGFRVTTPSPVSRPYSSAAASAAILATGYQLWLLLQNSLSDQQLSS 632
Score = 106 bits (227), Expect(2) = 8e-024
Identities = 50/126 (39%), Positives = 73/126 (57%)
Frame = +1 / +2
Query: 280 RVHRLQQLQQVTRADEMRSANVPAGGLWCLVHKQESIGSXXXXXXXXXXXXHSIRSSFQE 459
RVH L+Q QQ+ DE+R A+VPAGGL LV +++ +G +R+S +E
Sbjct: 254 RVHALEQAQQLPGGDEVRRADVPAGGLGRLVEQEQRVGDVADVDDVPQLVPRLVRASSEE 433
Query: 460 VDEELTARVERRLQKRAKDHSWIDRHNIQPGLLRVFKCGLF*RDLGDRIPVLFVPAELFI 639
VDEEL ARV+ RL++ + I ++ +PG V + RDL +R+P L PA+ F+
Sbjct: 434 VDEELAARVDGRLEQGTEHQRRIQSYHAKPGFPPVLERRCLRRDLSNRVPALVAPAKFFV 613
Query: 640 *PAVLI 657
PA LI
Sbjct: 614 RPAALI 631
Score = 91.8 bits (194), Expect(2) = 5e-088
Identities = 34/55 (61%), Positives = 44/55 (80%)
Frame = -2 / -3
Query: 273 YPFISKESIYDMEHPAPMTSDKLKKLGWKVRPLKEPIAETVEFCQHAGFFEDVEG 109
YP ++++SI DMEHPAPMTS KL+KLGW RPL+E I +TVE C+ AGF +D +G
Sbjct: 250 YPCMAEDSIRDMEHPAPMTSGKLEKLGWSSRPLRETITDTVECCREAGFLQDADG 86
Score = 91.3 bits (193), Expect(2) = 3e-028
Identities = 43/95 (45%), Positives = 57/95 (60%)
Frame = -1 / -2
Query: 565 IREADRAGCCDGQSSCGLWPSSAADAQHELSVPRLLPERRT*SNEGQALAHRRRQGHCRC 386
+R +RA + +S G+ + AD QHE VP LLP+RR * +EGQA+AHRRR R
Sbjct: 539 VRAGNRAWRGNSESGAGVRSPAPADHQHEQPVPHLLPQRRP*RDEGQAVAHRRRPRRRRR 360
Query: 385 SPACVRDTTSLRQAHLRSSFHQRA*PAGAAEDDVP 281
+ +R RQAHLR+S H R AG A++ VP
Sbjct: 359 AAPALRGARGHRQAHLRASLHHRPGAAGPAQEHVP 255
Score = 59.7 bits (124), Expect(2) = 2e-049
Identities = 26/54 (48%), Positives = 31/54 (57%)
Frame = +2 / +3
Query: 110 PSTSSKNPACWQNSTVSAMGSFSGLTFHPSFLSLSDVIGAGCXXXXXXXXXXKG 271
PS S +NPA Q+STVS + S SG HPSF S +VIGAGC +G
Sbjct: 87 PSASCRNPASRQHSTVSVIVSLSGRELHPSFSSFPEVIGAGCSMSRMLSSAMQG 248
Score = 54.7 bits (113), Expect(2) = 3e-028
Identities = 25/54 (46%), Positives = 33/54 (61%)
Frame = -1 / -2
Query: 274 LPFH*QGEHLRHGAPSSNDVRQAQETGMEGQAAEGTHCGNR*VLPACWVFRGRG 113
+P H +G+H HGAP S+D+R+A E G+E A EG R +LP V GRG
Sbjct: 251 VPLHGRGQHT*HGAPGSDDLRKAGEAGVELSATEGDDHRYRRMLPGGRVSTGRG 90
Score = 24.0 bits (46), Expect(2) = 8e-024
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +3 / +1
Query: 213 RTSLELGAPCRRCSP 257
R S E GAPC C P
Sbjct: 190 RRSSEPGAPCHVCCP 234
>gb|BJ450325.1|BJ450325 BJ450325 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak29b22 5', mRNA sequence
Length = 548
Score = 275 bits (595), Expect(2) = 2e-083
Identities = 103/136 (75%), Positives = 124/136 (91%)
Frame = -2 / +1
Query: 687 PKDWPKDKIKDENCWSDKEFCRNEENWYSVAKISSEEAALEYAKQTGLDVVTVNPAVVFG 508
PKDWP+ KI+DE+CWSDKEFCR+ ++WY VAKI++E AALEY ++TGL VVT+NPA+VFG
Sbjct: 46 PKDWPQGKIRDESCWSDKEFCRSNQSWYPVAKIAAEAAALEYGRETGLGVVTLNPALVFG 225
Query: 507 PLLQPTLNTSCQFLVYFLKGGPDRMRDKLWHIVDVRDTADALLLVYETPQASGRHICAPH 328
PLLQPT+NTS QFL+YFL+GGPD RDKLWHIVDVRD ADALLL+YE P+A+GRHICAPH
Sbjct: 226 PLLQPTINTSSQFLIYFLRGGPDETRDKLWHIVDVRDVADALLLLYEAPEATGRHICAPH 405
Query: 327 FISARDLLELLKTMYP 280
FI+AR+LL LLK+MYP
Sbjct: 406 FITARELLGLLKSMYP 453
Score = 171 bits (367), Expect(2) = 3e-045
Identities = 84/125 (67%), Positives = 89/125 (71%)
Frame = +2 / -1
Query: 314 RALMK*GAQMCLPEACGVSYTSRRASAVSLTSTMCQSLSLIRSGPPFRK*TRN*QLVLSV 493
RA+MK*GAQMCLP A G S + ASA S TSTMC SLSL+ SGPP RK* RN LVL V
Sbjct: 419 RAVMK*GAQMCLPVASGAS*SRSSASATSRTSTMCHSLSLVSSGPPLRK*MRNWLLVLMV 240
Query: 494 GCRRGPKTTAGLTVTTSSPVCFAYSSAASSDEILATEYQFSSFLQNSLSDQQFSSLILSL 673
G RGP T+AG VTT SPV YSSAA+S ILAT YQ LQNSLSDQQ SSLIL
Sbjct: 239 GWSRGPNTSAGFRVTTPSPVSRPYSSAAASAAILATGYQLWLLLQNSLSDQQLSSLILPW 60
Query: 674 GQSFG 688
GQS G
Sbjct: 59 GQSLG 45
Score = 120 bits (256), Expect(2) = 9e-028
Identities = 56/137 (40%), Positives = 79/137 (57%)
Frame = +1 / -3
Query: 280 RVHRLQQLQQVTRADEMRSANVPAGGLWCLVHKQESIGSXXXXXXXXXXXXHSIRSSFQE 459
RVH L+Q QQ+ DE+R A+VPAGGL LV +++ +G +R+S +E
Sbjct: 453 RVHALEQAQQLPGGDEVRRADVPAGGLGRLVEQEQRVGDVADVDDVPQLVPRLVRASSEE 274
Query: 460 VDEELTARVERRLQKRAKDHSWIDRHNIQPGLLRVFKCGLF*RDLGDRIPVLFVPAELFI 639
VDEEL ARV+ RL++ + I ++ +PG V + RDL +R+P L PA+ F+
Sbjct: 273 VDEELAARVDGRLEQGTEHQRRIQSYHAKPGFPPVLERRCLRRDLSNRVPALVAPAKFFV 94
Query: 640 *PAVLIFDLVFGPVFRV 690
PA LI D GPVF V
Sbjct: 93 RPAALISDFTLGPVFGV 43
Score = 93.2 bits (197), Expect(2) = 4e-025
Identities = 48/137 (35%), Positives = 62/137 (45%)
Frame = -3 / +2
Query: 689 TRKTGPKTRSKMRTAGQIKSSAGTKRTGILSPRSRQKRPHLNTRSRPGWML*RSIQLWSL 510
T KTGPK +S+MR AG+ K+ AG R G L RSR+++ +T +PG * I+ W
Sbjct: 44 TPKTGPKVKSEMRAAGRTKNFAGATRAGTLLLRSRRRQRRSSTGGKPGLAW*L*IRRWCS 223
Query: 509 ALFCXXXXXXXXXXXXXX*KEDLIEXXXXXXXXXXXXTLPMLSCLCTRHHKPPAGTFALL 330
+E L T P TR +PPAGT A L
Sbjct: 224 VPCSSRPSTRAASSSSTSSEEALTRRGTSCGTSSTSATSPTRCSCSTRRPRPPAGTSARL 403
Query: 329 ISSARVTCWSC*RRCTL 279
SS +CW+C R CTL
Sbjct: 404 TSSPPGSCWACSRACTL 454
Score = 91.3 bits (193), Expect(2) = 7e-022
Identities = 43/95 (45%), Positives = 57/95 (60%)
Frame = -1 / +3
Query: 565 IREADRAGCCDGQSSCGLWPSSAADAQHELSVPRLLPERRT*SNEGQALAHRRRQGHCRC 386
+R +RA + +S G+ + AD QHE VP LLP+RR * +EGQA+AHRRR R
Sbjct: 168 VRAGNRAWRGNSESGAGVRSPAPADHQHEQPVPHLLPQRRP*RDEGQAVAHRRRPRRRRR 347
Query: 385 SPACVRDTTSLRQAHLRSSFHQRA*PAGAAEDDVP 281
+ +R RQAHLR+S H R AG A++ VP
Sbjct: 348 AAPALRGARGHRQAHLRASLHHRPGAAGPAQEHVP 452
Score = 55.1 bits (114), Expect(2) = 2e-083
Identities = 20/28 (71%), Positives = 25/28 (89%)
Frame = -2 / +1
Query: 273 YPFISKESIYDMEHPAPMTSDKLKKLGW 190
YP ++++SI DMEHPAPMTS KL+KLGW
Sbjct: 457 YPCMAEDSIRDMEHPAPMTSGKLEKLGW 540
Score = 42.3 bits (86), Expect(2) = 4e-025
Identities = 15/29 (51%), Positives = 22/29 (75%)
Frame = -1 / +3
Query: 274 LPFH*QGEHLRHGAPSSNDVRQAQETGME 188
+P H +G+H HGAP S+D+R+A E G+E
Sbjct: 456 VPLHGRGQHT*HGAPGSDDLRKAGEAGVE 542
Score = 33.1 bits (66), Expect(2) = 7e-022
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = -3 / +2
Query: 290 RCTLMITLSLARRASTTWSTQLQ*RPTSSRNWDG 189
R + T + R A TWST+L+* P S R+W G
Sbjct: 440 RACTLGTPAWPRTAYVTWSTRLR*PPESWRSWGG 541
Score = 31.8 bits (63), Expect(2) = 3e-045
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +2 / -1
Query: 191 HPSFLSLSDVIGAGCXXXXXXXXXXKG 271
HPSF S +VIGAGC +G
Sbjct: 539 HPSFSSFPEVIGAGCSMSRMLSSAMQG 459
Score = 24.0 bits (46), Expect(2) = 9e-028
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +3 / -2
Query: 213 RTSLELGAPCRRCSP 257
R S E GAPC C P
Sbjct: 517 RRSSEPGAPCHVCCP 473
>gb|BF066116.1|BF066116 HV_CEb0014O07f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0014O07f, mRNA sequence
Length = 821
Score = 179 bits (385), Expect(2) = 9e-077
Identities = 76/100 (76%), Positives = 81/100 (81%)
Frame = -2 / +2
Query: 1101 RTEEAAGSAETACVTXAXXXIASWLVKLLLSRGYTVHGTVRDLSDNKTAHLKRLENASEN 922
R E AGS +T CVT A IASWLVKLLLSRGY VHGTVR L KT HL+RLENASEN
Sbjct: 47 RAEGNAGSGKTVCVTGAGGYIASWLVKLLLSRGYAVHGTVRHLGVEKTGHLRRLENASEN 226
Query: 921 LKLFKADVLDYDAMAGAVAGCQGVFHVATPVPSGKITDPE 802
L+LFKAD+LDYDAMA A+ GCQGVFHVATPVPS ITDPE
Sbjct: 227 LRLFKADLLDYDAMAAAIVGCQGVFHVATPVPSEIITDPE 346
Score = 152 bits (327), Expect(2) = 7e-061
Identities = 72/100 (72%), Positives = 74/100 (74%)
Frame = +2 / -3
Query: 803 SGSVIFPEGTGVAT*KTPWHPATAPAIAS*SRTSALKSLRFSEAFSNRFR*AVLLSLRSR 982
SGSV+ EGTGVAT KTPWHP A AIAS*SR SALKSLRFSEAFSNR R V + R R
Sbjct: 345 SGSVMISEGTGVATWKTPWHPTMAAAIAS*SRRSALKSLRFSEAFSNRLRWPVFSTPRWR 166
Query: 983 TVPWTV*PRERRSLTSHEAMXXXAXVTHAVSALPAASSVR 1102
TVPWT *PRERRS TSHEAM A VTH V LPA S R
Sbjct: 165 TVPWTA*PRERRSFTSHEAMYPPAPVTHTVFPLPAFPSAR 46
Score = 134 bits (288), Expect(2) = 2e-053
Identities = 63/101 (62%), Positives = 74/101 (73%)
Frame = +1 / -2
Query: 802 LWIGDLP*RNRSGDMKDSLAPCDCTRHSVVVKDISLEKLEVFGSIL*PLQMSGFIVTEVA 981
LWIG RN S DM++SLA D + H +V+K++SLE+ EVFGS+L*P QM+G + EVA
Sbjct: 346 LWIGYDFRRNGSRDMENSLASHDGSCHRIVIKEVSLEEPEVFGSVL*PPQMAGLLHAEVA 167
Query: 982 DGAVDGVATGEEELDEPRGDVXXGXRHARRLRAPGGLLCAS 1104
DGAVDGVA GEEEL EPRGDV G A RL APG LCAS
Sbjct: 166 DGAVDGVAAGEEELHEPRGDVPAGAGDAHRLPAPGISLCAS 44
Score = 132 bits (282), Expect(2) = 9e-077
Identities = 52/95 (54%), Positives = 65/95 (68%)
Frame = -2 / +1
Query: 798 EMLGPAVTGTINALKXXXXXXXXXXXXXXXXXXVEINPKDWPKDKIKDENCWSDKEFCRN 619
+MLGPAV+GT N LK VEINPKDWP+ KI+DE+CWSDKEFCR+
Sbjct: 478 QMLGPAVSGTTNVLKAASAANAVRVVVVSSMVAVEINPKDWPQGKIRDESCWSDKEFCRS 657
Query: 618 EENWYSVAKISSEEAALEYAKQTGLDVVTVNPAVV 514
++WY VAKI++E AALEY ++T L V +NPA V
Sbjct: 658 NQSWYPVAKIAAEAAALEYGRETRLGVXLLNPAPV 762
Score = 105 bits (224), Expect(2) = 7e-061
Identities = 45/91 (49%), Positives = 58/91 (63%)
Frame = +1 / -3
Query: 526 IDRHNIQPGLLRVFKCGLF*RDLGDRIPVLFVPAELFI*PAVLIFDLVFGPVFRVDLNGN 705
I + + +PG V + RDL +R+P L PA+ F+ PA LI D GPVFRVDL+G+
Sbjct: 750 IQKXHAKPGFPPVLERRCLRRDLSNRVPALVAPAKFFVRPAALISDFTLGPVFRVDLDGD 571
Query: 706 HG*NDDHSTSICSRRSLECVYGAGNSRTQHL 798
HG*+D+H IC R LE + GA NSR QHL
Sbjct: 570 HG*HDNHPHGICGRGGLEHIRGATNSRAQHL 478
Score = 100 bits (212), Expect(2) = 3e-035
Identities = 45/86 (52%), Positives = 55/86 (63%)
Frame = -3 / +2
Query: 803 SERCWVLLLPAP*THSRLRLLQMLVEWSSFHPWLPLRSTRKTGPKTRSKMRTAGQIKSSA 624
S +CW LLL AP SR L QM W S HPW P RSTRKTGPK +S+MR AG+ K+ A
Sbjct: 473 SYKCWALLLVAPRMCSRPPLPQMP*GWLSCHPWSPSRSTRKTGPKVKSEMRAAGRTKNFA 652
Query: 623 GTKRTGILSPRSRQKRPHLNTRSRPG 546
G R G L RSR+++ +T +PG
Sbjct: 653 GATRAGTLLLRSRRRQRRSSTGGKPG 730
Score = 98.7 bits (209), Expect(2) = 2e-053
Identities = 50/94 (53%), Positives = 54/94 (57%)
Frame = +2 / -1
Query: 515 TTAGLTVTTSSPVCFAYSSAASSDEILATEYQFSSFLQNSLSDQQFSSLILSLGQSFGLI 694
T AG T S V YSSAA+S ILAT YQ LQNSLSDQQ SSLIL GQSFGLI
Sbjct: 761 TGAGFKSXTPSRVSRPYSSAAASAAILATGYQLWLLLQNSLSDQQLSSLILPWGQSFGLI 582
Query: 695 SXXXXXXXXXXXXXXXXXXXLSAFMVPVTAGPSI 796
S LS F+VP+TAGP+I
Sbjct: 581 STATMDDTTTTLTAFAAEAALSTFVVPLTAGPNI 480
Score = 69.3 bits (145), Expect(2) = 3e-035
Identities = 33/55 (60%), Positives = 37/55 (67%)
Frame = -1 / +1
Query: 961 NRSSEAVRECFRKPQAFQG*CP*LRRYGGCSRRVPGSLSCRHSCSFREDHRSRAR 797
+R SEAVRE FRKPQA QG* P*LR G C R +P S CR S SF +RSR +
Sbjct: 187 DRPSEAVRERFRKPQALQG*PP*LRCDGSCHRGMPRSFPCRDSRSFGNHNRSRGK 351
>gb|BF066138.1|BF066138 HV_CEb0014P07f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0014P07f, mRNA sequence
Length = 821
Score = 179 bits (385), Expect(2) = 9e-077
Identities = 76/100 (76%), Positives = 81/100 (81%)
Frame = -2 / +2
Query: 1101 RTEEAAGSAETACVTXAXXXIASWLVKLLLSRGYTVHGTVRDLSDNKTAHLKRLENASEN 922
R E AGS +T CVT A IASWLVKLLLSRGY VHGTVR L KT HL+RLENASEN
Sbjct: 47 RAEGNAGSGKTVCVTGAGGYIASWLVKLLLSRGYAVHGTVRHLGVEKTGHLRRLENASEN 226
Query: 921 LKLFKADVLDYDAMAGAVAGCQGVFHVATPVPSGKITDPE 802
L+LFKAD+LDYDAMA A+ GCQGVFHVATPVPS ITDPE
Sbjct: 227 LRLFKADLLDYDAMAAAIVGCQGVFHVATPVPSEIITDPE 346
Score = 152 bits (327), Expect(2) = 7e-061
Identities = 72/100 (72%), Positives = 74/100 (74%)
Frame = +2 / -3
Query: 803 SGSVIFPEGTGVAT*KTPWHPATAPAIAS*SRTSALKSLRFSEAFSNRFR*AVLLSLRSR 982
SGSV+ EGTGVAT KTPWHP A AIAS*SR SALKSLRFSEAFSNR R V + R R
Sbjct: 345 SGSVMISEGTGVATWKTPWHPTMAAAIAS*SRRSALKSLRFSEAFSNRLRWPVFSTPRWR 166
Query: 983 TVPWTV*PRERRSLTSHEAMXXXAXVTHAVSALPAASSVR 1102
TVPWT *PRERRS TSHEAM A VTH V LPA S R
Sbjct: 165 TVPWTA*PRERRSFTSHEAMYPPAPVTHTVFPLPAFPSAR 46
Score = 134 bits (288), Expect(2) = 2e-053
Identities = 63/101 (62%), Positives = 74/101 (73%)
Frame = +1 / -2
Query: 802 LWIGDLP*RNRSGDMKDSLAPCDCTRHSVVVKDISLEKLEVFGSIL*PLQMSGFIVTEVA 981
LWIG RN S DM++SLA D + H +V+K++SLE+ EVFGS+L*P QM+G + EVA
Sbjct: 346 LWIGYDFRRNGSRDMENSLASHDGSCHRIVIKEVSLEEPEVFGSVL*PPQMAGLLHAEVA 167
Query: 982 DGAVDGVATGEEELDEPRGDVXXGXRHARRLRAPGGLLCAS 1104
DGAVDGVA GEEEL EPRGDV G A RL APG LCAS
Sbjct: 166 DGAVDGVAAGEEELHEPRGDVPAGAGDAHRLPAPGISLCAS 44
Score = 132 bits (282), Expect(2) = 9e-077
Identities = 52/95 (54%), Positives = 65/95 (68%)
Frame = -2 / +1
Query: 798 EMLGPAVTGTINALKXXXXXXXXXXXXXXXXXXVEINPKDWPKDKIKDENCWSDKEFCRN 619
+MLGPAV+GT N LK VEINPKDWP+ KI+DE+CWSDKEFCR+
Sbjct: 478 QMLGPAVSGTTNVLKAASAANAVRVVVVSSMVAVEINPKDWPQGKIRDESCWSDKEFCRS 657
Query: 618 EENWYSVAKISSEEAALEYAKQTGLDVVTVNPAVV 514
++WY VAKI++E AALEY ++T L V +NPA V
Sbjct: 658 NQSWYPVAKIAAEAAALEYGRETRLGVXLLNPAPV 762
Score = 105 bits (224), Expect(2) = 7e-061
Identities = 45/91 (49%), Positives = 58/91 (63%)
Frame = +1 / -3
Query: 526 IDRHNIQPGLLRVFKCGLF*RDLGDRIPVLFVPAELFI*PAVLIFDLVFGPVFRVDLNGN 705
I + + +PG V + RDL +R+P L PA+ F+ PA LI D GPVFRVDL+G+
Sbjct: 750 IQKXHAKPGFPPVLERRCLRRDLSNRVPALVAPAKFFVRPAALISDFTLGPVFRVDLDGD 571
Query: 706 HG*NDDHSTSICSRRSLECVYGAGNSRTQHL 798
HG*+D+H IC R LE + GA NSR QHL
Sbjct: 570 HG*HDNHPHGICGRGGLEHIRGATNSRAQHL 478
Score = 100 bits (212), Expect(2) = 3e-035
Identities = 45/86 (52%), Positives = 55/86 (63%)
Frame = -3 / +2
Query: 803 SERCWVLLLPAP*THSRLRLLQMLVEWSSFHPWLPLRSTRKTGPKTRSKMRTAGQIKSSA 624
S +CW LLL AP SR L QM W S HPW P RSTRKTGPK +S+MR AG+ K+ A
Sbjct: 473 SYKCWALLLVAPRMCSRPPLPQMP*GWLSCHPWSPSRSTRKTGPKVKSEMRAAGRTKNFA 652
Query: 623 GTKRTGILSPRSRQKRPHLNTRSRPG 546
G R G L RSR+++ +T +PG
Sbjct: 653 GATRAGTLLLRSRRRQRRSSTGGKPG 730
Score = 98.7 bits (209), Expect(2) = 2e-053
Identities = 50/94 (53%), Positives = 54/94 (57%)
Frame = +2 / -1
Query: 515 TTAGLTVTTSSPVCFAYSSAASSDEILATEYQFSSFLQNSLSDQQFSSLILSLGQSFGLI 694
T AG T S V YSSAA+S ILAT YQ LQNSLSDQQ SSLIL GQSFGLI
Sbjct: 761 TGAGFKSXTPSRVSRPYSSAAASAAILATGYQLWLLLQNSLSDQQLSSLILPWGQSFGLI 582
Query: 695 SXXXXXXXXXXXXXXXXXXXLSAFMVPVTAGPSI 796
S LS F+VP+TAGP+I
Sbjct: 581 STATMDDTTTTLTAFAAEAALSTFVVPLTAGPNI 480
Score = 69.3 bits (145), Expect(2) = 3e-035
Identities = 33/55 (60%), Positives = 37/55 (67%)
Frame = -1 / +1
Query: 961 NRSSEAVRECFRKPQAFQG*CP*LRRYGGCSRRVPGSLSCRHSCSFREDHRSRAR 797
+R SEAVRE FRKPQA QG* P*LR G C R +P S CR S SF +RSR +
Sbjct: 187 DRPSEAVRERFRKPQALQG*PP*LRCDGSCHRGMPRSFPCRDSRSFGNHNRSRGK 351
>gb|BE195648.3|BE195648 HVSMEh0090A21f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0090A21f, mRNA sequence
Length = 919
Score = 225 bits (485), Expect(3) = 8e-076
Identities = 85/134 (63%), Positives = 111/134 (82%)
Frame = -2 / +2
Query: 681 DWPKDKIKDENCWSDKEFCRNEENWYSVAKISSEEAALEYAKQTGLDVVTVNPAVVFGPL 502
+WP+DK+KDE+CWSDK+FC+ E+WYSVAKI +E+A+ EY+++ GL+VVTV P +VFGPL
Sbjct: 170 NWPQDKLKDESCWSDKDFCQKNEDWYSVAKIVAEQASFEYSEKNGLNVVTVCPPLVFGPL 349
Query: 501 LQPTLNTSCQFLVYFLKGGPDRMRDKLWHIVDVRDTADALLLVYETPQASGRHICAPHFI 322
LQPT+NTS +FL+Y GGPD M +KLWHIVDVRD ADALLLVYE ++ GR+IC P+ I
Sbjct: 350 LQPTVNTSSKFLIYVTNGGPDVMSNKLWHIVDVRDVADALLLVYEKAESYGRYICTPNNI 529
Query: 321 SARDLLELLKTMYP 280
DL++LLK M+P
Sbjct: 530 CTTDLVDLLKKMHP 571
Score = 139 bits (299), Expect(2) = 8e-039
Identities = 70/116 (60%), Positives = 74/116 (63%)
Frame = +2 / -2
Query: 332 GAQMCLPEACGVSYTSRRASAVSLTSTMCQSLSLIRSGPPFRK*TRN*QLVLSVGCRRGP 511
G QM LP SYTS +ASA S TSTMC SL LI SGPP * +N LV +VGC GP
Sbjct: 519 GVQMYLPYDSAFSYTSSKASATSRTSTMCHSLLLITSGPPLVT*IKNLLLVFTVGCNNGP 340
Query: 512 KTTAGLTVTTSSPVCFAYSSAASSDEILATEYQFSSFLQNSLSDQQFSSLILSLGQ 679
KT G TVTT +P YS A S ILATEYQ S F Q SLSDQQ SSL LS GQ
Sbjct: 339 KTKGGQTVTTFNPFFSEYSKDACSATILATEYQSSFFWQKSLSDQQLSSLSLS*GQ 172
Score = 104 bits (221), Expect(2) = 6e-027
Identities = 53/136 (38%), Positives = 75/136 (55%)
Frame = +1 / -1
Query: 274 IIRVHRLQQLQQVTRADEMRSANVPAGGLWCLVHKQESIGSXXXXXXXXXXXXHSIRSSF 453
++ VH LQQ+ QV AD +R A+V LVHKQ+ + H +R+S
Sbjct: 577 VLWVHLLQQVHQVRCADVVRRADVSPIRFCLLVHKQQGVSHIADVYNVPQLVAHHVRASV 398
Query: 454 QEVDEELTARVERRLQKRAKDHSWIDRHNIQPGLLRVFKCGLF*RDLGDRIPVLFVPAEL 633
VD E + RLQ+ K+ +R+NI LLR+FK LF +L +RIPVL + AE+
Sbjct: 397 SNVD*EFATCIHSRLQQWTKNQRRANRNNI*SILLRIFKGCLFGHNLSNRIPVLVLLAEV 218
Query: 634 FI*PAVLIFDLVFGPV 681
F+*PA LIF + P+
Sbjct: 217 FV*PATLIFKFILRPI 170
Score = 58.8 bits (122), Expect(3) = 8e-076
Identities = 26/56 (46%), Positives = 29/56 (51%)
Frame = -2 / +2
Query: 852 VFHVATPVPSGKITDPEREMLGPAVTGTINALKXXXXXXXXXXXXXXXXXXVEINP 685
VFH+ATPVP KI DPE E+L PAV GT N LK V+ NP
Sbjct: 2 VFHLATPVPEDKIVDPESEVLAPAVKGTSNVLKACSAMKVQKVIVLSSTAAVDFNP 169
Score = 41.4 bits (84), Expect(2) = 8e-039
Identities = 23/57 (40%), Positives = 24/57 (42%)
Frame = +2 / -2
Query: 683 FGLISXXXXXXXXXXXXXXXXXXXLSAFMVPVTAGPSISRSGSVIFPEGTGVAT*KT 853
FGL S S F VP TAG + S SGS I GTGVA KT
Sbjct: 171 FGLKSTAAVDDKTITF*TFIAEQAFSTFEVPFTAGANTSDSGSTILSSGTGVARWKT 1
Score = 40.0 bits (81), Expect(3) = 8e-076
Identities = 15/44 (34%), Positives = 28/44 (63%)
Frame = -2 / +2
Query: 252 SIYDMEHPAPMTSDKLKKLGWKVRPLKEPIAETVEFCQHAGFFE 121
+I D++ AP++S KLK LGWK E ++++V++ + A +
Sbjct: 590 NIVDVDRKAPISSQKLKDLGWKPPKAGETLSDSVDWYEKAXLLQ 721
Score = 37.3 bits (75), Expect(2) = 6e-027
Identities = 22/56 (39%), Positives = 29/56 (51%)
Frame = +3 / -3
Query: 684 SG*SQRQPWMKRRPLDEHLQQTQP*VRLWCR*QQDPASLALDR*SSLKEQEWRHER 851
SG*+Q Q WM R+ E ++P L QQ+P L D+ S L+ EWR R
Sbjct: 170 SG*NQLQQWMTRQ*PSEPS*PSKPLAHLKYLSQQEPILLTQDQQSYLQAPEWRGGR 3
>gb|BG365391.1|BG365391 HVSMEi0002I06f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0002I06f, mRNA sequence
Length = 757
Score = 161 bits (346), Expect(2) = 2e-072
Identities = 70/127 (55%), Positives = 81/127 (63%)
Frame = -2 / +1
Query: 1065 CVTXAXXXIASWLVKLLLSRGYTVHGTVRDLSDNKTAHLKRLENASENLKLFKADVLDYD 886
CVT IASWLVKLLLSRGY V+ TVRD SD K+ HLK+++ A ENL LF+ADVLDYD
Sbjct: 82 CVTGGGGFIASWLVKLLLSRGYAVNATVRDPSDPKSVHLKQMDEARENLHLFRADVLDYD 261
Query: 885 AMAGAVAGCQGVFHVATPVPSGKITDPEREMLGPAVTGTINALKXXXXXXXXXXXXXXXX 706
+ A GC+GVFH+ATPVP KI DPE E+L PA GT N LK
Sbjct: 262 TLTRAFEGCEGVFHLATPVPEDKIGDPESEVLAPAGKGTSNVLKACSAMKVQKVIGLSST 441
Query: 705 XXVEINP 685
V+ NP
Sbjct: 442 AAVDFNP 462
Score = 132 bits (283), Expect(2) = 2e-072
Identities = 48/82 (58%), Positives = 67/82 (81%)
Frame = -2 / +1
Query: 681 DWPKDKIKDENCWSDKEFCRNEENWYSVAKISSEEAALEYAKQTGLDVVTVNPAVVFGPL 502
+WP+DK+KDE+CWSDK+FC+ E+W SVAKI +E+A+ Y+++ GL+VVTV P +VFGPL
Sbjct: 463 NWPQDKLKDESCWSDKDFCQKNEDWCSVAKIVAEQASFRYSEKNGLNVVTVCPPLVFGPL 642
Query: 501 LQPTLNTSCQFLVYFLKGGPDR 436
+QPT+NTS +FL+Y G P R
Sbjct: 643 VQPTVNTSSKFLIYVTNGRPWR 708
Score = 108 bits (230), Expect(2) = 6e-043
Identities = 59/103 (57%), Positives = 62/103 (60%)
Frame = +2 / -3
Query: 758 SAFMVPVTAGPSISRSGSVIFPEGTGVAT*KTPWHPATAPAIAS*SRTSALKSLRFSEAF 937
S F VP AG + S SGS I GTGVA KTP HP+ A S*S TSAL RFS A
Sbjct: 389 STFEVPFPAGANTSDSGSPILSSGTGVARWKTPSHPSNARVSVS*SSTSALNKCRFSRAS 210
Query: 938 SNRFR*AVLLSLRSRTVPWTV*PRERRSLTSHEAMXXXAXVTH 1066
S R +L SL SRTV T *PRER SLTSHEAM VTH
Sbjct: 209 SICLRWTLLGSLGSRTVALTA*PRERSSLTSHEAMNPPPPVTH 81
Score = 94.5 bits (200), Expect(2) = 7e-031
Identities = 49/119 (41%), Positives = 75/119 (63%)
Frame = +1 / -2
Query: 685 RVDLNGNHG*NDDHSTSICSRRSLECVYGAGNSRTQHLSLWIGDLP*RNRSGDMKDSLAP 864
RV++N + G* ++ ++ SR SL + SR+Q+ L I +L R+RSG+++D L P
Sbjct: 462 RVEINCSSG*QANNLLNLHSRASL*HI*STFPSRSQYF*LRITNLIFRHRSGEVEDPLTP 283
Query: 865 CDCTRHSVVVKDISLEKLEVFGSIL*PLQMSGFIVTEVADGAVDGVATGEEELDEPRGD 1041
T VVV+ + E++++ ++ L++ VT VADG VDGVA GEE+LDEPRGD
Sbjct: 282 LKRTCQRVVVEHVGPEQVQILPGLVHLLEVDTLGVTWVADGGVDGVAAGEEQLDEPRGD 106
Score = 86.8 bits (183), Expect(2) = 6e-043
Identities = 45/81 (55%), Positives = 49/81 (60%)
Frame = +2 / -3
Query: 437 RSGPPFRK*TRN*QLVLSVGCRRGPKTTAGLTVTTSSPVCFAYSSAASSDEILATEYQFS 616
R G P * +N LV +VGC GPKT G TVTT +P Y A S ILATE+Q S
Sbjct: 707 RQGLPLVT*IKNLLLVFTVGCTNGPKTKGGQTVTTFNPFFSEYLKDACSATILATEHQSS 528
Query: 617 SFLQNSLSDQQFSSLILSLGQ 679
F Q SLSDQQ SSL LS GQ
Sbjct: 527 FFWQKSLSDQQLSSLSLS*GQ 465
Score = 60.2 bits (125), Expect(2) = 7e-031
Identities = 31/78 (39%), Positives = 44/78 (56%)
Frame = +1 / -2
Query: 448 SFQEVDEELTARVERRLQKRAKDHSWIDRHNIQPGLLRVFKCGLF*RDLGDRIPVLFVPA 627
S VD E + RL + K+ +R+NI LLR+ K LF +L +R PVL + A
Sbjct: 696 SVSNVD*EFATCIHSRLHQWTKNQRRANRNNI*SILLRISKGCLFGHNLSNRTPVLVLLA 517
Query: 628 ELFI*PAVLIFDLVFGPV 681
E+F+*PA LIF + P+
Sbjct: 516 EVFV*PATLIFKFILRPI 463
>gb|BJ452084.1|BJ452084 BJ452084 K. Sato unpublished cDNA library, cv. Akashinriki vegetative
stage leaves Hordeum vulgare subsp. vulgare cDNA clone
baak37l05 5', mRNA sequence
Length = 637
Score = 138 bits (297), Expect(3) = 4e-071
Identities = 57/88 (64%), Positives = 66/88 (75%)
Frame = -2 / +2
Query: 1017 LLSRGYTVHGTVRDLSDNKTAHLKRLENASENLKLFKADVLDYDAMAGAVAGCQGVFHVA 838
LLSRGY VH TVRD D K A L L+ A NL+LFKADVLDYD + A AGC+GVFHVA
Sbjct: 2 LLSRGYAVHATVRDPRDPKNAFLTELDGAPANLRLFKADVLDYDTVTAAFAGCEGVFHVA 181
Query: 837 TPVPSGKITDPEREMLGPAVTGTINALK 754
TPVP K+ DP++EM+ PAV GT+N LK
Sbjct: 182 TPVPDKKMVDPQKEMMEPAVKGTMNVLK 265
Score = 112 bits (239), Expect(3) = 4e-071
Identities = 41/62 (66%), Positives = 49/62 (79%)
Frame = -2 / +2
Query: 681 DWPKDKIKDENCWSDKEFCRNEENWYSVAKISSEEAALEYAKQTGLDVVTVNPAVVFGPL 502
DWP+DKIKDE+CWSDKE C+ ENWYS+AK +EE ALEY ++ GL VVT P +V GPL
Sbjct: 335 DWPRDKIKDESCWSDKELCKQSENWYSLAKTEAEEMALEYGEKNGLHVVTFCPGLVLGPL 514
Query: 501 LQ 496
LQ
Sbjct: 515 LQ 520
Score = 100 bits (212), Expect(3) = 9e-047
Identities = 53/87 (60%), Positives = 56/87 (64%)
Frame = +2 / -2
Query: 755 LSAFMVPVTAGPSISRSGSVIFPEGTGVAT*KTPWHPATAPAIAS*SRTSALKSLRFSEA 934
LS FMVP+TAG IS GS IF GTGVAT KTP PA A S*S TSAL S RF+ A
Sbjct: 264 LSTFMVPLTAGSIISFCGSTIFLSGTGVATWKTPSQPAKAAVTVS*SSTSALNSRRFAGA 85
Query: 935 FSNRFR*AVLLSLRSRTVPWTV*PRER 1015
S+ R A S SRTV WT *PRER
Sbjct: 84 PSSSVRNAFFGSRGSRTVAWTA*PRER 4
Score = 84.0 bits (177), Expect(3) = 9e-047
Identities = 39/62 (62%), Positives = 42/62 (67%)
Frame = +2 / -2
Query: 497 CRRGPKTTAGLTVTTSSPVCFAYSSAASSDEILATEYQFSSFLQNSLSDQQFSSLILSLG 676
C RGPKT G VTT +P YS A SS + A EYQFS LQ+SLSDQQ SSLILS G
Sbjct: 519 CNRGPKTRPGQNVTTCNPFFSPYSRAISSASVFAREYQFSLCLQSSLSDQQLSSLILSRG 340
Query: 677 QS 682
QS
Sbjct: 339 QS 334
Score = 70.3 bits (147), Expect(3) = 8e-026
Identities = 35/80 (43%), Positives = 49/80 (61%)
Frame = +1 / -1
Query: 685 RVDLNGNHG*NDDHSTSICSRRSLECVYGAGNSRTQHLSLWIGDLP*RNRSGDMKDSLAP 864
RV+ G + D + SR SLE ++GA +SR HL LWI L +RSGDM+D+LA
Sbjct: 334 RVEATSGDGRDHDEFMNFRSRASLEHIHGALDSRFHHLFLWINHLFVGHRSGDMEDALAA 155
Query: 865 CDCTRHSVVVKDISLEKLEV 924
+ RH VVV+ + LE+ +V
Sbjct: 154 GEGGRHGVVVEHVRLEQPQV 95
Score = 58.8 bits (122), Expect(3) = 1e-024
Identities = 29/73 (39%), Positives = 40/73 (54%)
Frame = -1 / +1
Query: 925 KPQAFQG*CP*LRRYGGCSRRVPGSLSCRHSCSFREDHRSRARDAGSCCYRHHKRTQGCV 746
+P A QG LR G RR+ G L CRHS + ++D S RD G+CC HH+ QG +
Sbjct: 94 EPAAVQGGRARLRHRDGRLRRLRGRLPCRHSGARQKDG*STERDDGTCCQGHHECAQGLL 273
Query: 745 CCKCSSSGRRFIH 707
+ S + R +H
Sbjct: 274 GYESS*THRGLVH 312
Score = 57.0 bits (118), Expect(3) = 4e-071
Identities = 23/36 (63%), Positives = 28/36 (77%)
Frame = -2 / +2
Query: 489 LNTSCQFLVYFLKGGPDRMRDKLWHIVDVRDTADAL 382
+NTS + LVY +KGGPD M +K + IVDVRD ADAL
Sbjct: 530 VNTSSKVLVYMIKGGPDTMNNKFFPIVDVRDVADAL 637
Score = 53.3 bits (110), Expect(3) = 1e-024
Identities = 28/68 (41%), Positives = 37/68 (54%)
Frame = -3 / +3
Query: 701 PLRSTRKTGPKTRSKMRTAGQIKSSAGTKRTGILSPRSRQKRPHLNTRSRPGWML*RSIQ 522
PL ++ + G + +SKMR AGQ +SSA RTGIL R + +R NT R G
Sbjct: 315 PLVASTRIGLEIKSKMRAAGQTRSSANRVRTGILLQRLKPRRWPWNTERRTGCTSSHFAL 494
Query: 521 LWSLALFC 498
+W AL C
Sbjct: 495 VWF*ALCC 518
Score = 51.9 bits (107), Expect(3) = 8e-026
Identities = 28/62 (45%), Positives = 38/62 (61%)
Frame = +1 / -1
Query: 496 LQKRAKDHSWIDRHNIQPGLLRVFKCGLF*RDLGDRIPVLFVPAELFI*PAVLIFDLVFG 675
LQ+RA + + ++QP LL VF+ L L RIPVL + AEL +*PA LIFD +
Sbjct: 520 LQQRA*NQTRAKCDDVQPVLLSVFQGHLLGFSLCKRIPVLTLFAELLV*PAALIFDFISR 341
Query: 676 PV 681
P+
Sbjct: 340 PI 335
Score = 42.3 bits (86), Expect(3) = 9e-047
Identities = 22/38 (57%), Positives = 25/38 (65%)
Frame = +2 / -2
Query: 386 ASAVSLTSTMCQSLSLIRSGPPFRK*TRN*QLVLSVGC 499
ASA S TSTM ++L I SGPPF *TR LVL+ C
Sbjct: 633 ASATSRTSTMGKNLLFIVSGPPFIM*TRTLLLVLTATC 520
Score = 39.1 bits (79), Expect(3) = 1e-024
Identities = 17/39 (43%), Positives = 23/39 (58%)
Frame = -1 / +1
Query: 502 SAADAQHELSVPRLLPERRT*SNEGQALAHRRRQGHCRC 386
+A Q++ PRL +RR * +E Q L+H RR CRC
Sbjct: 517 AACGGQYQQQGPRLHDKRRP*HDEQQVLSHSRRSRCCRC 633
Score = 33.1 bits (66), Expect(3) = 8e-026
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = +1 / -1
Query: 967 VTEVADGAVDGVATGEE 1017
VT VADG VDGVA GEE
Sbjct: 52 VTWVADGGVDGVAAGEE 2
>gb|BJ464456.1|BJ464456 BJ464456 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags34g17 5', mRNA sequence
Length = 647
Score = 170 bits (366), Expect(2) = 7e-067
Identities = 63/132 (47%), Positives = 94/132 (71%)
Frame = -2 / +2
Query: 690 NPKDWPKDKIKDENCWSDKEFCRNEENWYSVAKISSEEAALEYAKQTGLDVVTVNPAVVF 511
N +WPK K+ E+ WSD++ CR E+WY ++K +E A YA +TG+DVV + P++V
Sbjct: 251 NNPNWPKGKVFTEDSWSDEDLCRKGEDWYLLSKTRAEREAFAYAAKTGMDVVAILPSLVL 430
Query: 510 GPLLQPTLNTSCQFLVYFLKGGPDRMRDKLWHIVDVRDTADALLLVYETPQASGRHICAP 331
GPL+QPT+N S + L+ +LKG + + ++ W++VDVRD ADALLL YE P+ASGR+IC+P
Sbjct: 431 GPLMQPTVNASSKILLKYLKGEHETVENRFWNLVDVRDVADALLLAYENPEASGRYICSP 610
Query: 330 HFISARDLLELL 295
I D++ +L
Sbjct: 611 VRIKVSDVINIL 646
Score = 104 bits (222), Expect(2) = 7e-067
Identities = 40/60 (66%), Positives = 51/60 (85%)
Frame = -2 / +2
Query: 933 ASENLKLFKADVLDYDAMAGAVAGCQGVFHVATPVPSGKITDPEREMLGPAVTGTINALK 754
A E L+L AD+LDYD++A AVAGC+GVFHVA+PVPSG+ T+PE E++ PAVTGT+N LK
Sbjct: 11 AGERLQLLSADLLDYDSIASAVAGCEGVFHVASPVPSGRSTNPEEEVIAPAVTGTLNVLK 190
>gb|BE559021.2|BE559021 HV_CEb0022F12f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0022F12f, mRNA sequence
Length = 697
Score = 138 bits (297), Expect(3) = 5e-064
Identities = 57/89 (64%), Positives = 69/89 (77%)
Frame = -2 / +1
Query: 1020 LLLSRGYTVHGTVRDLSDNKTAHLKRLENASENLKLFKADVLDYDAMAGAVAGCQGVFHV 841
LL YTV GTVRD + K AHLK LE A E L+L AD+LDYD++A AVAGC+GVFHV
Sbjct: 130 LLSKAHYTVRGTVRDPGNAKNAHLKALEGAGERLQLLSADLLDYDSIASAVAGCEGVFHV 309
Query: 840 ATPVPSGKITDPEREMLGPAVTGTINALK 754
A+PVPSG+ T+PE E++ PAVTGT+N LK
Sbjct: 310 ASPVPSGRSTNPEEEVIAPAVTGTLNVLK 396
Score = 103 bits (219), Expect(3) = 5e-064
Identities = 37/80 (46%), Positives = 56/80 (70%)
Frame = -2 / +1
Query: 690 NPKDWPKDKIKDENCWSDKEFCRNEENWYSVAKISSEEAALEYAKQTGLDVVTVNPAVVF 511
N +WPK K+ E+ WSD++ CR E+WY ++K +E A YA +TG+DVV + P++V
Sbjct: 457 NNPNWPKGKVFTEDSWSDEDLCRKGEDWYLLSKTRAEREAFAYAAKTGMDVVAILPSLVL 636
Query: 510 GPLLQPTLNTSCQFLVYFLK 451
GPL+QPT+N S + L+ +LK
Sbjct: 637 GPLMQPTVNASSKILLKYLK 696
Score = 92.3 bits (195), Expect(2) = 7e-023
Identities = 62/157 (39%), Positives = 74/157 (47%)
Frame = +2 / -3
Query: 533 VTTSSPVCFAYSSAASSDEILATEYQFSSFLQNSLSDQQFSSLILSLGQSFGLISXXXXX 712
+ T+S FA + AS + SS + S Q SS+ GL++
Sbjct: 617 IATTSIPVFAA*AKASRSARVLESKYQSSPFLHRSSSDQLSSVNTLPLGQLGLLNTAAHE 438
Query: 713 XXXXXXXXXXXXXXLSAFMVPVTAGPSISRSGSVIFPEGTGVAT*KTPWHPATAPAIAS* 892
+ F VPVTAG S SG V PEGTG+AT KTP PATA A+ S*
Sbjct: 437 DTMTTRLTFASLQAFNTFSVPVTAGAITSSSGLVDLPEGTGLATWKTPSQPATADAMLS* 258
Query: 893 SRTSALKSLRFSEAFSNRFR*AVLLSLRSRTVPWTV* 1003
S SAL S S A S+ R*A L SRTVP TV*
Sbjct: 257 SSRSALSSCSLSPAPSSALR*AFLALPGSRTVPRTV* 147
Score = 42.3 bits (86), Expect(3) = 5e-064
Identities = 18/34 (52%), Positives = 21/34 (61%)
Frame = -2 / +1
Query: 1101 RTEEAAGSAETACVTXAXXXIASWLVKLLLSRGY 1000
R EAA CVT A +ASWLVKLLLS+ +
Sbjct: 46 RGMEAAAKRSVVCVTGAGGFVASWLVKLLLSKAH 147
Score = 35.4 bits (71), Expect(2) = 7e-023
Identities = 18/31 (58%), Positives = 18/31 (58%)
Frame = +2 / -3
Query: 1010 ERRSLTSHEAMXXXAXVTHAVSALPAASSVR 1102
ERRSLTSHEA A VTH AAS R
Sbjct: 137 ERRSLTSHEATKPPAPVTHTTLLFAAASIPR 45
>gb|BJ463463.1|BJ463463 BJ463463 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags32a03 5', mRNA sequence
Length = 662
Score = 138 bits (297), Expect(3) = 1e-062
Identities = 57/89 (64%), Positives = 69/89 (77%)
Frame = -2 / +1
Query: 1020 LLLSRGYTVHGTVRDLSDNKTAHLKRLENASENLKLFKADVLDYDAMAGAVAGCQGVFHV 841
LL YTV GTVRD + K AHLK LE A E L+L AD+LDYD++A AVAGC+GVFHV
Sbjct: 103 LLSKAHYTVRGTVRDPGNAKNAHLKALEGAGERLQLLSADLLDYDSIASAVAGCEGVFHV 282
Query: 840 ATPVPSGKITDPEREMLGPAVTGTINALK 754
A+PVPSG+ T+PE E++ PAVTGT+N LK
Sbjct: 283 ASPVPSGRSTNPEEEVIAPAVTGTLNVLK 369
Score = 98.7 bits (209), Expect(3) = 1e-062
Identities = 35/76 (46%), Positives = 53/76 (69%)
Frame = -2 / +1
Query: 690 NPKDWPKDKIKDENCWSDKEFCRNEENWYSVAKISSEEAALEYAKQTGLDVVTVNPAVVF 511
N +WPK K+ E+ WSD++ CR E+WY ++K +E A YA +TG+DVV + P++V
Sbjct: 430 NNPNWPKGKVFTEDSWSDEDLCRKGEDWYLLSKTRAEREAFAYAAKTGMDVVAILPSLVL 609
Query: 510 GPLLQPTLNTSCQFLV 463
GPL+QPT+N S + L+
Sbjct: 610 GPLMQPTVNASSKILL 657
Score = 92.3 bits (195), Expect(2) = 7e-023
Identities = 62/157 (39%), Positives = 74/157 (47%)
Frame = +2 / -1
Query: 533 VTTSSPVCFAYSSAASSDEILATEYQFSSFLQNSLSDQQFSSLILSLGQSFGLISXXXXX 712
+ T+S FA + AS + SS + S Q SS+ GL++
Sbjct: 590 IATTSIPVFAA*AKASRSARVLESKYQSSPFLHRSSSDQLSSVNTLPLGQLGLLNTAAHE 411
Query: 713 XXXXXXXXXXXXXXLSAFMVPVTAGPSISRSGSVIFPEGTGVAT*KTPWHPATAPAIAS* 892
+ F VPVTAG S SG V PEGTG+AT KTP PATA A+ S*
Sbjct: 410 DTMTTRLTFASLQAFNTFSVPVTAGAITSSSGLVDLPEGTGLATWKTPSQPATADAMLS* 231
Query: 893 SRTSALKSLRFSEAFSNRFR*AVLLSLRSRTVPWTV* 1003
S SAL S S A S+ R*A L SRTVP TV*
Sbjct: 230 SSRSALSSCSLSPAPSSALR*AFLALPGSRTVPRTV* 120
Score = 42.3 bits (86), Expect(3) = 1e-062
Identities = 18/34 (52%), Positives = 21/34 (61%)
Frame = -2 / +1
Query: 1101 RTEEAAGSAETACVTXAXXXIASWLVKLLLSRGY 1000
R EAA CVT A +ASWLVKLLLS+ +
Sbjct: 19 RGMEAAAKRSVVCVTGAGGFVASWLVKLLLSKAH 120
Score = 35.4 bits (71), Expect(2) = 7e-023
Identities = 18/31 (58%), Positives = 18/31 (58%)
Frame = +2 / -1
Query: 1010 ERRSLTSHEAMXXXAXVTHAVSALPAASSVR 1102
ERRSLTSHEA A VTH AAS R
Sbjct: 110 ERRSLTSHEATKPPAPVTHTTLLFAAASIPR 18
>gb|BJ464137.1|BJ464137 BJ464137 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags33a09 5', mRNA sequence
Length = 663
Score = 138 bits (297), Expect(3) = 5e-062
Identities = 57/89 (64%), Positives = 69/89 (77%)
Frame = -2 / +1
Query: 1020 LLLSRGYTVHGTVRDLSDNKTAHLKRLENASENLKLFKADVLDYDAMAGAVAGCQGVFHV 841
LL YTV GTVRD + K AHLK LE A E L+L AD+LDYD++A AVAGC+GVFHV
Sbjct: 121 LLSKAHYTVRGTVRDPGNAKNAHLKALEGAGERLQLLSADLLDYDSIASAVAGCEGVFHV 300
Query: 840 ATPVPSGKITDPEREMLGPAVTGTINALK 754
A+PVPSG+ T+PE E++ PAVTGT+N LK
Sbjct: 301 ASPVPSGRSTNPEEEVIAPAVTGTLNVLK 387
Score = 96.4 bits (204), Expect(3) = 5e-062
Identities = 34/71 (47%), Positives = 50/71 (70%)
Frame = -2 / +1
Query: 690 NPKDWPKDKIKDENCWSDKEFCRNEENWYSVAKISSEEAALEYAKQTGLDVVTVNPAVVF 511
N +WPK K+ E+ WSD++ CR E+WY ++K +E A YA +TG+DVV + P++V
Sbjct: 448 NNPNWPKGKVFTEDSWSDEDLCRKGEDWYLLSKTRAEREAFAYAAKTGMDVVAILPSLVL 627
Query: 510 GPLLQPTLNTS 478
GPL+QPT+N S
Sbjct: 628 GPLMQPTVNAS 660
Score = 92.3 bits (195), Expect(2) = 7e-023
Identities = 62/157 (39%), Positives = 74/157 (47%)
Frame = +2 / -2
Query: 533 VTTSSPVCFAYSSAASSDEILATEYQFSSFLQNSLSDQQFSSLILSLGQSFGLISXXXXX 712
+ T+S FA + AS + SS + S Q SS+ GL++
Sbjct: 608 IATTSIPVFAA*AKASRSARVLESKYQSSPFLHRSSSDQLSSVNTLPLGQLGLLNTAAHE 429
Query: 713 XXXXXXXXXXXXXXLSAFMVPVTAGPSISRSGSVIFPEGTGVAT*KTPWHPATAPAIAS* 892
+ F VPVTAG S SG V PEGTG+AT KTP PATA A+ S*
Sbjct: 428 DTMTTRLTFASLQAFNTFSVPVTAGAITSSSGLVDLPEGTGLATWKTPSQPATADAMLS* 249
Query: 893 SRTSALKSLRFSEAFSNRFR*AVLLSLRSRTVPWTV* 1003
S SAL S S A S+ R*A L SRTVP TV*
Sbjct: 248 SSRSALSSCSLSPAPSSALR*AFLALPGSRTVPRTV* 138
Score = 42.3 bits (86), Expect(3) = 5e-062
Identities = 18/34 (52%), Positives = 21/34 (61%)
Frame = -2 / +1
Query: 1101 RTEEAAGSAETACVTXAXXXIASWLVKLLLSRGY 1000
R EAA CVT A +ASWLVKLLLS+ +
Sbjct: 37 RGMEAAAKRSVVCVTGAGGFVASWLVKLLLSKAH 138
Score = 35.4 bits (71), Expect(2) = 7e-023
Identities = 18/31 (58%), Positives = 18/31 (58%)
Frame = +2 / -2
Query: 1010 ERRSLTSHEAMXXXAXVTHAVSALPAASSVR 1102
ERRSLTSHEA A VTH AAS R
Sbjct: 128 ERRSLTSHEATKPPAPVTHTTLLFAAASIPR 36
>gb|BU988879.1|BU988879 HF18P19r HF Hordeum vulgare subsp. vulgare cDNA clone HF18P19
5-PRIME, mRNA sequence
Length = 529
Score = 225 bits (485), Expect(2) = 2e-061
Identities = 85/134 (63%), Positives = 111/134 (82%)
Frame = -2 / +2
Query: 681 DWPKDKIKDENCWSDKEFCRNEENWYSVAKISSEEAALEYAKQTGLDVVTVNPAVVFGPL 502
+WP+DK+KDE+CWSDK+FC+ E+WYSVAKI +E+A+ EY+++ GL+VVTV P +VFGPL
Sbjct: 47 NWPQDKLKDESCWSDKDFCQKNEDWYSVAKIVAEQASFEYSEKNGLNVVTVCPPLVFGPL 226
Query: 501 LQPTLNTSCQFLVYFLKGGPDRMRDKLWHIVDVRDTADALLLVYETPQASGRHICAPHFI 322
LQPT+NTS +FL+Y GGPD M +KLWHIVDVRD ADALLLVYE ++ GR+IC P+ I
Sbjct: 227 LQPTVNTSSKFLIYVTNGGPDVMSNKLWHIVDVRDVADALLLVYEKAESYGRYICTPNNI 406
Query: 321 SARDLLELLKTMYP 280
DL++LLK M+P
Sbjct: 407 CTTDLVDLLKKMHP 448
Score = 139 bits (299), Expect = 2e-032
Identities = 70/116 (60%), Positives = 74/116 (63%)
Frame = +2 / -2
Query: 332 GAQMCLPEACGVSYTSRRASAVSLTSTMCQSLSLIRSGPPFRK*TRN*QLVLSVGCRRGP 511
G QM LP SYTS +ASA S TSTMC SL LI SGPP * +N LV +VGC GP
Sbjct: 396 GVQMYLPYDSAFSYTSSKASATSRTSTMCHSLLLITSGPPLVT*IKNLLLVFTVGCNNGP 217
Query: 512 KTTAGLTVTTSSPVCFAYSSAASSDEILATEYQFSSFLQNSLSDQQFSSLILSLGQ 679
KT G TVTT +P YS A S ILATEYQ S F Q SLSDQQ SSL LS GQ
Sbjct: 216 KTKGGQTVTTFNPFFSEYSKDACSATILATEYQSSFFWQKSLSDQQLSSLSLS*GQ 49
Score = 104 bits (221), Expect = 1e-021
Identities = 53/136 (38%), Positives = 75/136 (55%)
Frame = +1 / -1
Query: 274 IIRVHRLQQLQQVTRADEMRSANVPAGGLWCLVHKQESIGSXXXXXXXXXXXXHSIRSSF 453
++ VH LQQ+ QV AD +R A+V LVHKQ+ + H +R+S
Sbjct: 454 VLWVHLLQQVHQVRCADVVRRADVSPIRFCLLVHKQQGVSHIADVYNVPQLVAHHVRASV 275
Query: 454 QEVDEELTARVERRLQKRAKDHSWIDRHNIQPGLLRVFKCGLF*RDLGDRIPVLFVPAEL 633
VD E + RLQ+ K+ +R+NI LLR+FK LF +L +RIPVL + AE+
Sbjct: 274 SNVD*EFATCIHSRLQQWTKNQRRANRNNI*SILLRIFKGCLFGHNLSNRIPVLVLLAEV 95
Query: 634 FI*PAVLIFDLVFGPV 681
F+*PA LIF + P+
Sbjct: 94 FV*PATLIFKFILRPI 47
Score = 31.8 bits (63), Expect(2) = 2e-061
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = -2 / +2
Query: 252 SIYDMEHPAPMTSDKLKKLGW 190
+I D++ AP++S KLK LGW
Sbjct: 467 NIVDVDRKAPISSQKLKDLGW 529
>gb|AL506722.1|AL506722 AL506722 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY04A23T 5',
mRNA sequence
Length = 619
Score = 138 bits (297), Expect(3) = 8e-061
Identities = 57/89 (64%), Positives = 69/89 (77%)
Frame = -2 / +2
Query: 1020 LLLSRGYTVHGTVRDLSDNKTAHLKRLENASENLKLFKADVLDYDAMAGAVAGCQGVFHV 841
LL YTV GTVRD + K AHLK LE A E L+L AD+LDYD++A AVAGC+GVFHV
Sbjct: 68 LLSKAHYTVRGTVRDPGNAKNAHLKALEGAGERLQLLSADLLDYDSIASAVAGCEGVFHV 247
Query: 840 ATPVPSGKITDPEREMLGPAVTGTINALK 754
A+PVPSG+ T+PE E++ PAVTGT+N LK
Sbjct: 248 ASPVPSGRSTNPEEEVIAPAVTGTLNVLK 334
Score = 98.2 bits (208), Expect(3) = 8e-061
Identities = 35/75 (46%), Positives = 52/75 (69%)
Frame = -2 / +2
Query: 690 NPKDWPKDKIKDENCWSDKEFCRNEENWYSVAKISSEEAALEYAKQTGLDVVTVNPAVVF 511
N +WPK K+ E+ WSD++ CR E+WY ++K +E A YA +TG+DVV + P++V
Sbjct: 395 NNPNWPKGKVFTEDSWSDEDLCRKGEDWYLLSKTRAEREAFAYAAKTGMDVVAILPSLVL 574
Query: 510 GPLLQPTLNTSCQFL 466
GPL+QPT+N S + L
Sbjct: 575 GPLMQPTVNASSKIL 619
Score = 92.3 bits (195), Expect(2) = 1e-021
Identities = 62/157 (39%), Positives = 74/157 (47%)
Frame = +2 / -2
Query: 533 VTTSSPVCFAYSSAASSDEILATEYQFSSFLQNSLSDQQFSSLILSLGQSFGLISXXXXX 712
+ T+S FA + AS + SS + S Q SS+ GL++
Sbjct: 555 IATTSIPVFAA*AKASRSARVLESKYQSSPFLHRSSSDQLSSVNTLPLGQLGLLNTAAHE 376
Query: 713 XXXXXXXXXXXXXXLSAFMVPVTAGPSISRSGSVIFPEGTGVAT*KTPWHPATAPAIAS* 892
+ F VPVTAG S SG V PEGTG+AT KTP PATA A+ S*
Sbjct: 375 DTMTTRLTFASLQAFNTFSVPVTAGAITSSSGLVDLPEGTGLATWKTPSQPATADAMLS* 196
Query: 893 SRTSALKSLRFSEAFSNRFR*AVLLSLRSRTVPWTV* 1003
S SAL S S A S+ R*A L SRTVP TV*
Sbjct: 195 SSRSALSSCSLSPAPSSALR*AFLALPGSRTVPRTV* 85
Score = 36.3 bits (73), Expect(3) = 8e-061
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = -2 / +2
Query: 1065 CVTXAXXXIASWLVKLLLSRGY 1000
CVT A +ASWLVKLLLS+ +
Sbjct: 20 CVTGAGGFVASWLVKLLLSKAH 85
Score = 31.3 bits (62), Expect(2) = 1e-021
Identities = 14/19 (73%), Positives = 14/19 (73%)
Frame = +2 / -2
Query: 1010 ERRSLTSHEAMXXXAXVTH 1066
ERRSLTSHEA A VTH
Sbjct: 75 ERRSLTSHEATKPPAPVTH 19
>gb|BG367870.1|BG367870 HVSMEi0014B22f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0014B22f, mRNA sequence
Length = 867
Score = 204 bits (441), Expect(2) = 1e-058
Identities = 79/125 (63%), Positives = 102/125 (81%)
Frame = -2 / +1
Query: 654 ENCWSDKEFCRNEENWYSVAKISSEEAALEYAKQTGLDVVTVNPAVVFGPLLQPTLNTSC 475
E+CWSDK+FC+ E+WYSVAKI +E+A+ EY+++ GL+VVTV P +VFGPLLQPT+NTS
Sbjct: 1 ESCWSDKDFCQKNEDWYSVAKIVAEQASFEYSEKNGLNVVTVCPPLVFGPLLQPTVNTSS 180
Query: 474 QFLVYFLKGGPDRMRDKLWHIVDVRDTADALLLVYETPQASGRHICAPHFISARDLLELL 295
+FL+Y GGPD M +KLWHIVDVRD ADALLLVYE ++ GR+IC P+ I DL++LL
Sbjct: 181 KFLIYVTNGGPDVMSNKLWHIVDVRDVADALLLVYEKAESYGRYICTPNNICTTDLVDLL 360
Query: 294 KTMYP 280
K M+P
Sbjct: 361 KKMHP 375
Score = 128 bits (274), Expect(2) = 1e-033
Identities = 63/106 (59%), Positives = 67/106 (63%)
Frame = +2 / -2
Query: 332 GAQMCLPEACGVSYTSRRASAVSLTSTMCQSLSLIRSGPPFRK*TRN*QLVLSVGCRRGP 511
G QM LP SYTS +ASA S TSTMC SL LI SGPP * +N LV +VGC GP
Sbjct: 323 GVQMYLPYDSAFSYTSSKASATSRTSTMCHSLLLITSGPPLVT*IKNLLLVFTVGCNNGP 144
Query: 512 KTTAGLTVTTSSPVCFAYSSAASSDEILATEYQFSSFLQNSLSDQQ 649
KT G TVTT +P YS A S ILATEYQ S F Q SLSDQQ
Sbjct: 143 KTKGGQTVTTFNPFFSEYSKDACSATILATEYQSSFFWQKSLSDQQ 6
Score = 95.0 bits (201), Expect(2) = 2e-021
Identities = 50/127 (39%), Positives = 70/127 (55%)
Frame = +1 / -1
Query: 274 IIRVHRLQQLQQVTRADEMRSANVPAGGLWCLVHKQESIGSXXXXXXXXXXXXHSIRSSF 453
++ VH LQQ+ QV AD +R A+V LVHKQ+ + H +R+S
Sbjct: 381 VLWVHLLQQVHQVRCADVVRRADVSPIRFCLLVHKQQGVSHIADVYNVPQLVAHHVRASV 202
Query: 454 QEVDEELTARVERRLQKRAKDHSWIDRHNIQPGLLRVFKCGLF*RDLGDRIPVLFVPAEL 633
VD E + RLQ+ K+ +R+NI LLR+FK LF +L +RIPVL + AE+
Sbjct: 201 SNVD*EFATCIHSRLQQWTKNQRRANRNNI*SILLRIFKGCLFGHNLSNRIPVLVLLAEV 22
Query: 634 FI*PAVL 654
F+*PA L
Sbjct: 21 FV*PATL 1
Score = 42.8 bits (87), Expect(2) = 1e-058
Identities = 18/41 (43%), Positives = 26/41 (63%)
Frame = -2 / +1
Query: 252 SIYDMEHPAPMTSDKLKKLGWKVRPLKEPIAETVEFCQHAG 130
+I D++ AP++S KLK LGWK R L+E + V+ AG
Sbjct: 394 NIVDVDRKAPISSQKLKDLGWKPRKLEETPLDIVDCFDKAG 516
Score = 35.4 bits (71), Expect(2) = 1e-033
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +1 / -1
Query: 121 LEKPSMLAELNGFRNGFLQRPDLPSQFLELVGRHWSWVLHVVDAL 255
L++ S++ ++ FLQ P LP Q L+L+ R+ +HV D +
Sbjct: 525 LQRSSLIKTVHDVERRFLQLPRLPPQILQLLRRYRRLTVHVDDVV 391
Score = 27.6 bits (54), Expect(2) = 2e-021
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = +2 / -2
Query: 125 KNPACWQNSTVSAMGSFSGLTFHPSFLSLSDVIGA 229
+ PA + ST+S S S FHP S D IGA
Sbjct: 521 RGPALSKQSTMSRGVSSSFRGFHPRSFSFCDDIGA 417
>gb|BU989165.1|BU989165 HF19P19r HF Hordeum vulgare subsp. vulgare cDNA clone HF19P19
5-PRIME, mRNA sequence
Length = 518
Score = 225 bits (485), Expect = 5e-058
Identities = 85/134 (63%), Positives = 111/134 (82%)
Frame = -2 / +2
Query: 681 DWPKDKIKDENCWSDKEFCRNEENWYSVAKISSEEAALEYAKQTGLDVVTVNPAVVFGPL 502
+WP+DK+KDE+CWSDK+FC+ E+WYSVAKI +E+A+ EY+++ GL+VVTV P +VFGPL
Sbjct: 47 NWPQDKLKDESCWSDKDFCQKNEDWYSVAKIVAEQASFEYSEKNGLNVVTVCPPLVFGPL 226
Query: 501 LQPTLNTSCQFLVYFLKGGPDRMRDKLWHIVDVRDTADALLLVYETPQASGRHICAPHFI 322
LQPT+NTS +FL+Y GGPD M +KLWHIVDVRD ADALLLVYE ++ GR+IC P+ I
Sbjct: 227 LQPTVNTSSKFLIYVTNGGPDVMSNKLWHIVDVRDVADALLLVYEKAESYGRYICTPNNI 406
Query: 321 SARDLLELLKTMYP 280
DL++LLK M+P
Sbjct: 407 CTTDLVDLLKKMHP 448
Score = 139 bits (299), Expect = 2e-032
Identities = 70/116 (60%), Positives = 74/116 (63%)
Frame = +2 / -3
Query: 332 GAQMCLPEACGVSYTSRRASAVSLTSTMCQSLSLIRSGPPFRK*TRN*QLVLSVGCRRGP 511
G QM LP SYTS +ASA S TSTMC SL LI SGPP * +N LV +VGC GP
Sbjct: 396 GVQMYLPYDSAFSYTSSKASATSRTSTMCHSLLLITSGPPLVT*IKNLLLVFTVGCNNGP 217
Query: 512 KTTAGLTVTTSSPVCFAYSSAASSDEILATEYQFSSFLQNSLSDQQFSSLILSLGQ 679
KT G TVTT +P YS A S ILATEYQ S F Q SLSDQQ SSL LS GQ
Sbjct: 216 KTKGGQTVTTFNPFFSEYSKDACSATILATEYQSSFFWQKSLSDQQLSSLSLS*GQ 49
Score = 104 bits (221), Expect = 1e-021
Identities = 53/136 (38%), Positives = 75/136 (55%)
Frame = +1 / -2
Query: 274 IIRVHRLQQLQQVTRADEMRSANVPAGGLWCLVHKQESIGSXXXXXXXXXXXXHSIRSSF 453
++ VH LQQ+ QV AD +R A+V LVHKQ+ + H +R+S
Sbjct: 454 VLWVHLLQQVHQVRCADVVRRADVSPIRFCLLVHKQQGVSHIADVYNVPQLVAHHVRASV 275
Query: 454 QEVDEELTARVERRLQKRAKDHSWIDRHNIQPGLLRVFKCGLF*RDLGDRIPVLFVPAEL 633
VD E + RLQ+ K+ +R+NI LLR+FK LF +L +RIPVL + AE+
Sbjct: 274 SNVD*EFATCIHSRLQQWTKNQRRANRNNI*SILLRIFKGCLFGHNLSNRIPVLVLLAEV 95
Query: 634 FI*PAVLIFDLVFGPV 681
F+*PA LIF + P+
Sbjct: 94 FV*PATLIFKFILRPI 47
>gb|AV836450.1|AV836450 AV836450 K. Sato unpublished cDNA library: Hordeum vulgare subsp.
vulgare seedling leaves second leaf stage Hordeum
vulgare subsp. vulgare cDNA clone basd16h21, mRNA
sequence
Length = 566
Score = 190 bits (409), Expect(2) = 2e-057
Identities = 76/121 (62%), Positives = 87/121 (71%)
Frame = -2 / +1
Query: 975 LSDNKTAHLKRLENASENLKLFKADVLDYDAMAGAVAGCQGVFHVATPVPSGKITDPERE 796
L+ KT HL+ LENASENLKL KAD+LD DAMA A+ GCQGVFHVA+PVP+G +TDPE E
Sbjct: 88 LAXKKTGHLRSLENASENLKLIKADLLDNDAMAAAIEGCQGVFHVASPVPTGDVTDPEVE 267
Query: 795 MLGPAVTGTINALKXXXXXXXXXXXXXXXXXXVEINPKDWPKDKIKDENCWSDKEFCRNE 616
+LGPA TGT N L+ V+INPKDWP DKIKDE CWSD+EFCRN
Sbjct: 268 VLGPAATGTRNVLEAASAAKVRRLVVVSSIVAVDINPKDWPADKIKDETCWSDREFCRNN 447
Query: 615 E 613
E
Sbjct: 448 E 450
Score = 141 bits (303), Expect(2) = 2e-042
Identities = 68/113 (60%), Positives = 73/113 (64%)
Frame = +2 / -1
Query: 614 SSFLQNSLSDQQFSSLILSLGQSFGLISXXXXXXXXXXXXXXXXXXXLSAFMVPVTAGPS 793
S FLQNSLSDQQ SSLILS GQSFGLIS S F+VPV AGP
Sbjct: 449 SLFLQNSLSDQQVSSLILSAGQSFGLISTATMDETTTSRRTFAADAASSTFLVPVAAGPR 270
Query: 794 ISRSGSVIFPEGTGVAT*KTPWHPATAPAIAS*SRTSALKSLRFSEAFSNRFR 952
S SGSV P GTG+AT KTPWHP+ A AIAS S SAL SLRFS+AFS+ R
Sbjct: 269 TSTSGSVTSPVGTGLATWKTPWHPSMAAAIASLSSRSALISLRFSDAFSSDLR 111
Score = 136 bits (292), Expect(2) = 2e-039
Identities = 58/118 (49%), Positives = 86/118 (72%)
Frame = +1 / -3
Query: 613 LFVPAELFI*PAVLIFDLVFGPVFRVDLNGNHG*NDDHSTSICSRRSLECVYGAGNSRTQ 792
L VPA+L +*P IFDLV GP+FRVD++G++G*+DD ++ RSL+ + G + RTQ
Sbjct: 450 LIVPAKLSV*PTSFIFDLVGGPIFRVDIDGDYG*DDD*PPNLRGGRSLQHIPGTSSGRTQ 271
Query: 793 HLSLWIGDLP*RNRSGDMKDSLAPCDCTRHSVVVKDISLEKLEVFGSIL*PLQMSGFI 966
+L+LWI +P RNR+GDM++SLA +RH V+++ I L+KLE+F +L* QM+G +
Sbjct: 270 NLNLWISHIPRRNRAGDMENSLASLYGSRHRVIIEQIGLDKLEIFRCVL*RPQMAGLL 97
Score = 53.3 bits (110), Expect(2) = 2e-057
Identities = 23/31 (74%), Positives = 24/31 (77%)
Frame = -2 / +3
Query: 1059 TXAXXXIASWLVKLLLSRGYTVHGTVRDLSD 967
T A IASWLV LLLSRGYTV GTVRDL +
Sbjct: 3 TGAGGYIASWLVXLLLSRGYTVRGTVRDLGE 95
Score = 51.9 bits (107), Expect(2) = 2e-042
Identities = 21/31 (67%), Positives = 23/31 (74%)
Frame = +1 / -1
Query: 961 FIVTEVADGAVDGVATGEEELDEPRGDVXXG 1053
F + +VADGA DGVA GEEE EPRGDV G
Sbjct: 101 FXLAKVADGAADGVAAGEEEXHEPRGDVPAG 9
Score = 46.9 bits (96), Expect(2) = 2e-039
Identities = 23/31 (74%), Positives = 23/31 (74%)
Frame = +2 / -2
Query: 968 SLRSRTVPWTV*PRERRSLTSHEAMXXXAXV 1060
S RSRTVP TV*PRERR TSHEAM A V
Sbjct: 94 SPRSRTVPRTV*PRERRXXTSHEAMYPPAPV 2
>gb|CA013907.1|CA013907 HT09N23r HT Hordeum vulgare subsp. vulgare cDNA clone HT09N23
5-PRIME, mRNA sequence
Length = 636
Score = 180 bits (388), Expect(2) = 1e-054
Identities = 70/137 (51%), Positives = 99/137 (72%)
Frame = -2 / +3
Query: 690 NPKDWPKDKIKDENCWSDKEFCRNEENWYSVAKISSEEAALEYAKQTGLDVVTVNPAVVF 511
N +WPK K DE+ WSD++ CR E+WY ++K +E A YA++TGLDVVT+ P++V
Sbjct: 177 NNPNWPKGKFFDEDSWSDEDLCRKGEDWYFLSKTLAEREAFAYAEKTGLDVVTICPSLVI 356
Query: 510 GPLLQPTLNTSCQFLVYFLKGGPDRMRDKLWHIVDVRDTADALLLVYETPQASGRHICAP 331
GPL+Q T+NTS L+ +LKG D + +KL ++VDVRD ADALLL YE P+ASGR+IC+
Sbjct: 357 GPLMQSTVNTSSNILINYLKGERDTVENKLRNLVDVRDVADALLLAYEKPEASGRYICSS 536
Query: 330 HFISARDLLELLKTMYP 280
+ D++ +LKT+YP
Sbjct: 537 VPVKVSDMISVLKTLYP 587
Score = 96.4 bits (204), Expect(2) = 1e-025
Identities = 56/114 (49%), Positives = 65/114 (57%)
Frame = +2 / -3
Query: 338 QMCLPEACGVSYTSRRASAVSLTSTMCQSLSLIRSGPPFRK*TRN*QLVLSVGCRRGPKT 517
QM P+A G SY +RRASA S TST SL S P R R LV +V C +GP T
Sbjct: 529 QMYRPDASGFSYANRRASATSRTSTRFLSLFSTVSRSPLR*LMRILLLVFTVDCIKGPIT 350
Query: 518 TAGLTVTTSSPVCFAYSSAASSDEILATEYQFSSFLQNSLSDQQFSSLILSLGQ 679
G VTTS+PV A + A+ S +L +YQ S FLQ S SDQ SS L LGQ
Sbjct: 349 NDGHIVTTSNPVFSA*AKASRSASVLERKYQSSPFLQRSSSDQLSSSKNLPLGQ 188
Score = 53.8 bits (111), Expect(2) = 1e-054
Identities = 20/30 (66%), Positives = 26/30 (86%)
Frame = -2 / +3
Query: 843 VATPVPSGKITDPEREMLGPAVTGTINALK 754
VA+PVPSG+ T+PE E++ PAVTGT+N LK
Sbjct: 27 VASPVPSGRSTNPEEEVIAPAVTGTLNVLK 116
Score = 40.9 bits (83), Expect(2) = 1e-025
Identities = 20/53 (37%), Positives = 22/53 (41%)
Frame = +2 / -3
Query: 686 GLISXXXXXXXXXXXXXXXXXXXLSAFMVPVTAGPSISRSGSVIFPEGTGVAT 844
GL+ F VPVTAG S SG V PEGTG+AT
Sbjct: 184 GLLDTAATEDTMTTRLTFAS*QAFKTFSVPVTAGAITSSSGLVDLPEGTGLAT 26
>gb|BE196376.3|BE196376 HVSMEh0092C03f Hordeum vulgare 5-45 DAP spike EST library HVcDNA0009
(5 to 45 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEh0092C03f, mRNA sequence
Length = 975
Score = 165 bits (354), Expect(3) = 2e-054
Identities = 71/127 (55%), Positives = 81/127 (63%)
Frame = -2 / +1
Query: 1065 CVTXAXXXIASWLVKLLLSRGYTVHGTVRDLSDNKTAHLKRLENASENLKLFKADVLDYD 886
CVT IASWLVKLLLSRGY V+ TVRD SD K HLK+++ A ENL LF+ADVLDYD
Sbjct: 82 CVTGGGGFIASWLVKLLLSRGYAVNATVRDPSDPKNVHLKQMDEARENLHLFRADVLDYD 261
Query: 885 AMAGAVAGCQGVFHVATPVPSGKITDPEREMLGPAVTGTINALKXXXXXXXXXXXXXXXX 706
+ A GC+GVFH+ATPVP KI DPE E+L PAV GT N LK
Sbjct: 262 TLTRAFEGCEGVFHLATPVPEDKIVDPESEVLAPAVKGTSNVLKACSAMKVQKVIVLSST 441
Query: 705 XXVEINP 685
V+ NP
Sbjct: 442 AAVDFNP 462
Score = 112 bits (239), Expect(2) = 2e-029
Identities = 64/128 (50%), Positives = 66/128 (51%)
Frame = +2 / -2
Query: 683 FGLISXXXXXXXXXXXXXXXXXXXLSAFMVPVTAGPSISRSGSVIFPEGTGVAT*KTPWH 862
FGL S S F VP TAG + S SGS I GTGVA KTP H
Sbjct: 464 FGLKSTAAVDDKTITF*TFIAEQAFSTFEVPFTAGANTSDSGSTILSSGTGVARWKTPSH 285
Query: 863 PATAPAIAS*SRTSALKSLRFSEAFSNRFR*AVLLSLRSRTVPWTV*PRERRSLTSHEAM 1042
P+ A S*S TSAL RFS A S R L SL SRTV T *PRER SLTSHEAM
Sbjct: 284 PSNARVSVS*SSTSALNKCRFSRASSICLRWTFLGSLGSRTVALTA*PRERSSLTSHEAM 105
Query: 1043 XXXAXVTH 1066
VTH
Sbjct: 104 NPPPPVTH 81
Score = 99.6 bits (211), Expect(2) = 7e-025
Identities = 50/119 (42%), Positives = 77/119 (64%)
Frame = +1 / -1
Query: 685 RVDLNGNHG*NDDHSTSICSRRSLECVYGAGNSRTQHLSLWIGDLP*RNRSGDMKDSLAP 864
RV++N + G* D++ ++ SR SL + +SR+Q+ L I +L R+RSG+++D L P
Sbjct: 462 RVEINCSSG*QDNNFLNLHSRASL*HI*STFHSRSQYF*LRINNLIFRHRSGEVEDPLTP 283
Query: 865 CDCTRHSVVVKDISLEKLEVFGSIL*PLQMSGFIVTEVADGAVDGVATGEEELDEPRGD 1041
T VVV+ + E++++ ++ L++ VT VADG VDGVA GEE+LDEPRGD
Sbjct: 282 LKRTCQRVVVEHVGPEQVQILPGLVHLLEVDILGVTWVADGGVDGVAAGEEQLDEPRGD 106
Score = 64.3 bits (134), Expect(3) = 2e-054
Identities = 20/43 (46%), Positives = 32/43 (74%)
Frame = -2 / +1
Query: 681 DWPKDKIKDENCWSDKEFCRNEENWYSVAKISSEEAALEYAKQ 553
+WP+DK+KDE+CWSDK+FC+ E+W AKI + +L + ++
Sbjct: 463 NWPQDKLKDESCWSDKDFCQKNEDWVFCAKIVANRHSLIFGEE 591
Score = 37.7 bits (76), Expect(2) = 2e-029
Identities = 20/30 (66%), Positives = 20/30 (66%)
Frame = +2 / -2
Query: 590 ILATEYQFSSFLQNSLSDQQFSSLILSLGQ 679
ILA Q S F Q SLSDQQ SSL LS GQ
Sbjct: 554 ILAQNTQSSFFWQKSLSDQQLSSLSLS*GQ 465
Score = 35.0 bits (70), Expect(2) = 7e-025
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +1 / -1
Query: 589 DLGDRIPVLFVPAELFI*PAVLIFDLVFGPV 681
+L PVL + AE+F+*PA LIF + P+
Sbjct: 555 NLSTEYPVLVLLAEVFV*PATLIFKFILRPI 463
Score = 22.6 bits (43), Expect(3) = 2e-054
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -2 / +3
Query: 525 PAVVFGPLLQP 493
P + FGPLLQP
Sbjct: 615 PLLGFGPLLQP 647
>gb|BJ469082.1|BJ469082 BJ469082 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal13a15 5', mRNA sequence
Length = 554
Score = 101 bits (215), Expect(3) = 2e-054
Identities = 42/70 (60%), Positives = 53/70 (75%)
Frame = -2 / +3
Query: 1011 SRGYTVHGTVRDLSDNKTAHLKRLENASENLKLFKADVLDYDAMAGAVAGCQGVFHVATP 832
+RGY V+ TVRD D K A LK+L+ A ENL+LFKAD+LDYD +A A GC+GVFH+A+P
Sbjct: 3 ARGYAVNATVRDPCDPKNACLKQLDMAPENLQLFKADMLDYDMVATAFVGCEGVFHLASP 182
Query: 831 VPSGKITDPE 802
VP K+ D E
Sbjct: 183 VPIDKMVDKE 212
Score = 95.9 bits (203), Expect(3) = 2e-054
Identities = 37/70 (52%), Positives = 51/70 (72%)
Frame = -2 / +3
Query: 489 LNTSCQFLVYFLKGGPDRMRDKLWHIVDVRDTADALLLVYETPQASGRHICAPHFISARD 310
LN + +FL Y +KGGPD + +K W IVDVRD ADALLL+Y + R+IC+ H I +D
Sbjct: 339 LNITTKFLRYIIKGGPDTINNKFWPIVDVRDVADALLLLYNKAKPCQRYICSEHQIDIKD 518
Query: 309 LLELLKTMYP 280
L++L+K+MYP
Sbjct: 519 LVDLMKSMYP 548
Score = 59.7 bits (124), Expect(3) = 2e-022
Identities = 35/67 (52%), Positives = 38/67 (56%)
Frame = +2 / -2
Query: 809 SVIFPEGTGVAT*KTPWHPATAPAIAS*SRTSALKSLRFSEAFSNRFR*AVLLSLRSRTV 988
S I GTG A KTP HP A A S*S SAL + RFS A S+ R A S SRTV
Sbjct: 205 STILSMGTGEARWKTPSHPTNAVATMS*SSMSALNNWRFSGAISSCLRHAFFGSHGSRTV 26
Query: 989 PWTV*PR 1009
+T *PR
Sbjct: 25 AFTA*PR 5
Score = 58.3 bits (121), Expect(3) = 2e-054
Identities = 24/42 (57%), Positives = 31/42 (73%)
Frame = -2 / +3
Query: 621 NEENWYSVAKISSEEAALEYAKQTGLDVVTVNPAVVFGPLLQ 496
++E WY++AK+ +EE ALEYA + GL VVT VFGPLLQ
Sbjct: 204 DKEIWYALAKMEAEEMALEYADKNGLHVVTFCSGAVFGPLLQ 329
Score = 45.5 bits (93), Expect(3) = 2e-022
Identities = 21/40 (52%), Positives = 22/40 (55%)
Frame = +2 / -2
Query: 497 CRRGPKTTAGLTVTTSSPVCFAYSSAASSDEILATEYQFS 616
C RGPKT VTT +P AYS A SS ILA Y S
Sbjct: 328 CNRGPKTAPEQNVTTCNPFLSAYSRAISSASILARAYHIS 209
Score = 42.3 bits (86), Expect(3) = 2e-022
Identities = 22/40 (55%), Positives = 25/40 (62%)
Frame = +2 / -2
Query: 371 YTSRRASAVSLTSTMCQSLSLIRSGPPFRK*TRN*QLVLS 490
Y ASA S TSTM Q+L I SGPPF * RN ++LS
Sbjct: 457 YNRSSASATSRTSTMGQNLLFIVSGPPFMI*RRNLVVILS 338
>gb|BM816674.1|BM816674 HB01C06_T3.ab1 HB Hordeum vulgare subsp. vulgare cDNA clone
HB01C06_T3.ab1 similar to Aldehyde reductase,Hydrogen
dehydrogenase,Alcohol dehydrogenase,Cinnamyl-alcohol
dehydrogenase,Hydrogenase,Cytochrome-c3
hydrogenase,Cinnamoyl-CoA reductase,Transferred entry:
1.18.99.1,Carbonyl reductase (NADPH),Dihydrokaempferol
4-reductase,, mRNA sequence
Length = 847
Score = 129 bits (276), Expect(3) = 5e-054
Identities = 57/155 (36%), Positives = 83/155 (53%)
Frame = -2 / +1
Query: 816 ITDPEREMLGPAVTGTINALKXXXXXXXXXXXXXXXXXXVEINPKDWPKDKIKDENCWSD 637
+ DP+ E+L PAV GT+N L+ V N K D + DE +S
Sbjct: 337 VKDPKAELLDPAVNGTLNVLRSCKKASIKRVIVTSSMAAVAYNGKPRTPDVVVDETWFSS 516
Query: 636 KEFCRNEENWYSVAKISSEEAALEYAKQTGLDVVTVNPAVVFGPLLQPTLNTSCQFLVYF 457
E C + WY ++K +EEAA ++AK GL ++T+NP +V GPLLQPTLNTS + ++
Sbjct: 517 AEVCEKNKQWYVLSKTLAEEAAWKFAKDNGLXIITINPTMVIGPLLQPTLNTSAEAILKX 696
Query: 456 LKGGPDRMRDKLWHIVDVRDTADALLLVYETPQAS 352
+ G + V+V+D A A +L YE P A+
Sbjct: 697 INGSSSTYAHFCFGWVNVKDVALAHILAYEDPSAT 801
Score = 65.2 bits (136), Expect(3) = 5e-054
Identities = 28/47 (59%), Positives = 32/47 (68%)
Frame = -2 / +1
Query: 1101 RTEEAAGSAETACVTXAXXXIASWLVKLLLSRGYTVHGTVRDLSDNK 961
R E ++G + CVT A IASWLVKLLL RGYTV TVRD +D K
Sbjct: 52 RGEMSSGMGKVVCVTGASGYIASWLVKLLLHRGYTVRATVRDTADPK 192
Score = 56.1 bits (116), Expect(3) = 5e-054
Identities = 23/44 (52%), Positives = 28/44 (63%)
Frame = -2 / +1
Query: 963 KTAHLKRLENASENLKLFKADVLDYDAMAGAVAGCQGVFHVATP 832
KT HL+ LE A E L LFKA +L+ A+AGC VFH A+P
Sbjct: 193 KTLHLQALEGAKERLHLFKASLLEEGTFDAAIAGCDCVFHTASP 324
>gb|BJ468735.1|BJ468735 BJ468735 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp. vulgare
cDNA clone basd27a15 5', mRNA sequence
Length = 505
Score = 163 bits (351), Expect(2) = 8e-052
Identities = 69/103 (66%), Positives = 81/103 (78%)
Frame = -2 / +3
Query: 1062 VTXAXXXIASWLVKLLLSRGYTVHGTVRDLSDNKTAHLKRLENASENLKLFKADVLDYDA 883
VT IASWLVKLLLSRGY VH TVRD SD K AHL +L+ A+ENL+LFKADVLD A
Sbjct: 3 VTGGGGFIASWLVKLLLSRGYAVHATVRDPSDQKNAHLMQLDGAAENLRLFKADVLDSAA 182
Query: 882 MAGAVAGCQGVFHVATPVPSGKITDPEREMLGPAVTGTINALK 754
+A AV GC+GVFHVA+PVP+ KI DPE E++ PAV GT+N L+
Sbjct: 183 LAAAVEGCEGVFHVASPVPADKILDPESEVMVPAVKGTLNTLE 311
Score = 112 bits (239), Expect(2) = 9e-031
Identities = 60/100 (60%), Positives = 63/100 (63%)
Frame = +2 / -1
Query: 764 FMVPVTAGPSISRSGSVIFPEGTGVAT*KTPWHPATAPAIAS*SRTSALKSLRFSEAFSN 943
F VP TAG S SGS I GTG AT KTP HP+TA A A+ S TSAL RFS A S+
Sbjct: 301 FKVPFTAGTMTSDSGSRILSAGTGEATWKTPSHPSTAAASAALSSTSALNRRRFSAAPSS 122
Query: 944 RFR*AVLLSLRSRTVPWTV*PRERRSLTSHEAMXXXAXVT 1063
R A SL SRTV WT *PRER SLTSHEAM VT
Sbjct: 121 CIRCAFFWSLGSRTVAWTA*PRERSSLTSHEAMNPPPPVT 2
Score = 61.1 bits (127), Expect(2) = 8e-052
Identities = 20/41 (48%), Positives = 29/41 (70%)
Frame = -2 / +3
Query: 681 DWPKDKIKDENCWSDKEFCRNEENWYSVAKISSEEAALEYA 559
+WP K KDE+CWSD++ C++ E WY +AK +E+ EYA
Sbjct: 381 NWPLGKPKDESCWSDRKVCKDNEIWYCLAKTVAEQTVWEYA 503
Score = 41.8 bits (85), Expect(2) = 9e-031
Identities = 21/40 (52%), Positives = 23/40 (57%)
Frame = +2 / -1
Query: 560 AYSSAASSDEILATEYQFSSFLQNSLSDQQFSSLILSLGQ 679
AYS S +LA +YQ S L LSDQQ SSL L GQ
Sbjct: 502 AYSQTVCSATVLARQYQISLSLHTFLSDQQLSSLGLPRGQ 383
>gb|AW983188.3|AW983188 HVSMEg0008J14f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0008J14f, mRNA sequence
Length = 910
Score = 151 bits (324), Expect(2) = 2e-051
Identities = 65/108 (60%), Positives = 74/108 (68%)
Frame = -2 / +2
Query: 1077 AETACVTXAXXXIASWLVKLLLSRGYTVHGTVRDLSDNKTAHLKRLENASENLKLFKADV 898
A CVT I S LVKLLLSRGY VH TVRD D K A L L+ A NL+LFKADV
Sbjct: 65 APRVCVTGGNGFIGSCLVKLLLSRGYAVHATVRDPRDPKNAFLTELDGAPANLRLFKADV 244
Query: 897 LDYDAMAGAVAGCQGVFHVATPVPSGKITDPEREMLGPAVTGTINALK 754
LDYD + A AGC+GV HV TPVP K+ DP++EM+ PAV GT+N LK
Sbjct: 245 LDYDTVTAAFAGCEGVLHVNTPVPEKKMVDPQKEMMEPAVKGTMNVLK 388
Score = 118 bits (253), Expect(2) = 1e-033
Identities = 63/108 (58%), Positives = 66/108 (61%)
Frame = +2 / -2
Query: 755 LSAFMVPVTAGPSISRSGSVIFPEGTGVAT*KTPWHPATAPAIAS*SRTSALKSLRFSEA 934
LS FMVP+TAG IS GS IF GTGV T KTP HPA A S*S TSAL S RF+ A
Sbjct: 387 LSTFMVPLTAGSIISFCGSTIFFSGTGVLTCKTPSHPAKAAVTVS*SSTSALNSRRFAGA 208
Query: 935 FSNRFR*AVLLSLRSRTVPWTV*PRERRSLTSHEAMXXXAXVTHAVSA 1078
S+ R A S SRTV WT *PRER SLT HE M VTH A
Sbjct: 207 PSSSVRNAFFGSRGSRTVAWTA*PRERSSLTRHEPMKPLPPVTHTRGA 64
Score = 72.5 bits (152), Expect(2) = 2e-051
Identities = 27/51 (52%), Positives = 34/51 (66%)
Frame = -2 / +2
Query: 681 DWPKDKIKDENCWSDKEFCRNEENWYSVAKISSEEAALEYAKQTGLDVVTV 529
DW DKIKDE+CWSDKE ENW S+AK + E AL ++ G+ VVT+
Sbjct: 458 DWTPDKIKDESCWSDKELFEQRENWCSLAKTEAHEMALGIGEKNGVHVVTI 610
Score = 45.1 bits (92), Expect(2) = 1e-033
Identities = 25/50 (50%), Positives = 30/50 (60%)
Frame = +2 / -2
Query: 533 VTTSSPVCFAYSSAASSDEILATEYQFSSFLQNSLSDQQFSSLILSLGQS 682
VTT +P A S + A E+QFS ++SLSDQQ SSLILS QS
Sbjct: 606 VTTCTPFFSPIPRAISWASVFAREHQFSLCSKSSLSDQQLSSLILSGVQS 457
>gb|BI948507.1|BI948507 HVSMEl0009O08f Hordeum vulgare spike EST library HVcDNA0012 (Fusarium
infected) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEl0009O08f, mRNA sequence
Length = 1042
Score = 153 bits (329), Expect(3) = 4e-051
Identities = 65/104 (62%), Positives = 77/104 (74%)
Frame = -2 / +3
Query: 1065 CVTXAXXXIASWLVKLLLSRGYTVHGTVRDLSDNKTAHLKRLENASENLKLFKADVLDYD 886
CVT IASWLVKLLLSRGY VH TVRD D K AHL +L+ A+E+L LFKAD+LD
Sbjct: 84 CVTGGGGFIASWLVKLLLSRGYAVHTTVRDPCDQKNAHLMQLDGAAESLSLFKADMLDRA 263
Query: 885 AMAGAVAGCQGVFHVATPVPSGKITDPEREMLGPAVTGTINALK 754
A+A A AGCQGVFHV +PVP+ K PE E++ PAV GT+N L+
Sbjct: 264 ALAAAAAGCQGVFHVTSPVPADKTVYPESEIMVPAVKGTLNILE 395
Score = 108 bits (230), Expect = 7e-023
Identities = 56/101 (55%), Positives = 60/101 (59%)
Frame = +2 / -1
Query: 764 FMVPVTAGPSISRSGSVIFPEGTGVAT*KTPWHPATAPAIAS*SRTSALKSLRFSEAFSN 943
F VP TAG IS SG + GTG T KTPW PA A A A+ S SAL LR S A S+
Sbjct: 385 FKVPFTAGTMISDSG*TVLSAGTGEVTWKTPWQPAAAAASAARSSMSALNKLRLSAAPSS 206
Query: 944 RFR*AVLLSLRSRTVPWTV*PRERRSLTSHEAMXXXAXVTH 1066
R A S SRTV WT *PRER SLTSH+AM VTH
Sbjct: 205 CIRCAFFWSHGSRTVVWTA*PRERSSLTSHDAMNPPPPVTH 83
Score = 62.0 bits (129), Expect(3) = 4e-051
Identities = 27/63 (42%), Positives = 37/63 (58%)
Frame = -2 / +3
Query: 681 DWPKDKIKDENCWSDKEFCRNEENWYSVAKISSEEAALEYAKQTGLDVVTVNPAVVFGPL 502
+WP K KDE+ W+DK+ C +E Y+ AK +EE L + Q L VV + P + GP
Sbjct: 465 NWPWGKPKDESFWADKKICMEKEALYTFAKTVAEENRLGISIQK*LHVVPLGPYMAIGPP 644
Query: 501 LQP 493
LQP
Sbjct: 645 LQP 653
Score = 25.4 bits (49), Expect(3) = 4e-051
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = -2 / +1
Query: 489 LNTSCQFLVYFLKGGPDRMRD 427
+NT+ + +Y +KGGP+ D
Sbjct: 658 VNTTREIPIYVIKGGPNAYND 720
>gb|AV915311.1|AV915311 AV915311 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags13n08 5', mRNA sequence
Length = 578
Score = 138 bits (297), Expect(3) = 5e-051
Identities = 57/89 (64%), Positives = 69/89 (77%)
Frame = -2 / +2
Query: 1020 LLLSRGYTVHGTVRDLSDNKTAHLKRLENASENLKLFKADVLDYDAMAGAVAGCQGVFHV 841
LL YTV GTVRD + K AHLK LE A E L+L AD+LDYD++A AVAGC+GVFHV
Sbjct: 104 LLSKAHYTVRGTVRDPGNAKNAHLKALEGAGERLQLLSADLLDYDSIASAVAGCEGVFHV 283
Query: 840 ATPVPSGKITDPEREMLGPAVTGTINALK 754
A+PVPSG+ T+PE E++ PAVTGT+N LK
Sbjct: 284 ASPVPSGRSTNPEEEVIAPAVTGTLNVLK 370
Score = 89.0 bits (188), Expect(2) = 4e-021
Identities = 54/122 (44%), Positives = 61/122 (50%)
Frame = +2 / -3
Query: 638 SDQQFSSLILSLGQSFGLISXXXXXXXXXXXXXXXXXXXLSAFMVPVTAGPSISRSGSVI 817
S Q SS+ GL++ + F VPVTAG S SG V
Sbjct: 486 SSDQLSSVNTLPLGQLGLLNTAAHEDTMTTRLTFASLQAFNTFSVPVTAGAITSSSGLVD 307
Query: 818 FPEGTGVAT*KTPWHPATAPAIAS*SRTSALKSLRFSEAFSNRFR*AVLLSLRSRTVPWT 997
PEGTG+AT KTP PATA A+ S*S SAL S S A S+ R*A L SRTVP T
Sbjct: 306 LPEGTGLATWKTPSQPATADAMLS*SSRSALSSCSLSPAPSSALR*AFLALPGSRTVPRT 127
Query: 998 V* 1003
V*
Sbjct: 126 V* 121
Score = 62.5 bits (130), Expect(3) = 5e-051
Identities = 21/49 (42%), Positives = 32/49 (65%)
Frame = -2 / +2
Query: 690 NPKDWPKDKIKDENCWSDKEFCRNEENWYSVAKISSEEAALEYAKQTGL 544
N +WPK K+ E+ WSD++ CR E+WY ++K +E A YA +TG+
Sbjct: 431 NNPNWPKGKVFTEDSWSDEDLCRKGEDWYLLSKTRAEREAFAYAAKTGM 577
Score = 39.1 bits (79), Expect(3) = 5e-051
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = -2 / +2
Query: 1083 GSAETACVTXAXXXIASWLVKLLLSRGY 1000
G CVT A +ASWLVKLLLS+ +
Sbjct: 38 GEXSVVCVTGAGGFVASWLVKLLLSKAH 121
Score = 32.7 bits (65), Expect(2) = 4e-021
Identities = 15/25 (60%), Positives = 15/25 (60%)
Frame = +2 / -3
Query: 1010 ERRSLTSHEAMXXXAXVTHAVSALP 1084
ERRSLTSHEA A VTH P
Sbjct: 111 ERRSLTSHEATKPPAPVTHTTLXSP 37
>gb|AV918145.1|AV918145 AV918145 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags20a13 3', mRNA sequence
Length = 767
Score = 182 bits (392), Expect(2) = 7e-051
Identities = 67/137 (48%), Positives = 99/137 (72%)
Frame = -2 / -3
Query: 690 NPKDWPKDKIKDENCWSDKEFCRNEENWYSVAKISSEEAALEYAKQTGLDVVTVNPAVVF 511
N +WPK K+ E+ WSD++ CR E+WY ++K +E A YA +TG+DVV + P++V
Sbjct: 678 NNPNWPKGKVFTEDSWSDEDLCRKGEDWYLLSKTRAEREAFAYAAKTGMDVVAILPSLVL 499
Query: 510 GPLLQPTLNTSCQFLVYFLKGGPDRMRDKLWHIVDVRDTADALLLVYETPQASGRHICAP 331
GPL+QPT+N S + L+ +LKG + + ++ W++VDVRD ADALLL YE P+ASGR+IC+P
Sbjct: 498 GPLMQPTVNASSKILLKYLKGEHETVENRFWNLVDVRDVADALLLAYENPEASGRYICSP 319
Query: 330 HFISARDLLELLKTMYP 280
I D++ +LKT+YP
Sbjct: 318 VRIKVSDVINILKTLYP 268
Score = 39.1 bits (79), Expect(2) = 7e-051
Identities = 14/38 (36%), Positives = 27/38 (71%)
Frame = -2 / -3
Query: 243 DMEHPAPMTSDKLKKLGWKVRPLKEPIAETVEFCQHAG 130
++E M+S+KL+KLGW RP+++ + ++VE + +G
Sbjct: 240 EVEEGKVMSSEKLQKLGWTFRPVEKTLGDSVESYKASG 127
>gb|AV836954.1|AV836954 AV836954 K. Sato unpublished cDNA library: Hordeum vulgare subsp.
vulgare seedling leaves second leaf stage Hordeum
vulgare subsp. vulgare cDNA clone basd16h21, mRNA
sequence
Length = 627
Score = 109 bits (233), Expect(3) = 7e-050
Identities = 42/52 (80%), Positives = 47/52 (90%)
Frame = -2 / -3
Query: 432 RDKLWHIVDVRDTADALLLVYETPQASGRHICAPHFISARDLLELLKTMYPD 277
RDKLWHIVDVRDTADALLL+YE P+A GRHICAPH I+ARDL ++LK MYPD
Sbjct: 625 RDKLWHIVDVRDTADALLLLYEAPEAVGRHICAPHVITARDLRDMLKNMYPD 470
Score = 105 bits (223), Expect(3) = 7e-050
Identities = 39/56 (69%), Positives = 47/56 (83%)
Frame = -2 / -3
Query: 276 DYPFISKESIYDMEHPAPMTSDKLKKLGWKVRPLKEPIAETVEFCQHAGFFEDVEG 109
DYP +SKESI DM+HPAPMT+DKLKKLGW R L+E I +TV+FCQ AGF +DV+G
Sbjct: 472 DYPLVSKESICDMDHPAPMTTDKLKKLGWSCRSLEETITDTVKFCQQAGFLDDVDG 305
Score = 84.5 bits (178), Expect(2) = 3e-030
Identities = 34/55 (61%), Positives = 44/55 (80%)
Frame = +1 / +2
Query: 112 LHVLEKPSMLAELNGFRNGFLQRPDLPSQFLELVGRHWSWVLHVVDALLANERVI 276
+H++EKP +LAEL+G R+G LQRP P Q LELVGRH S V+HV DALLA+ R++
Sbjct: 308 VHIVEKPGLLAELDGVRDGLLQRPAAPPQLLELVGRHRSRVIHVTDALLAD*RIV 472
Score = 75.3 bits (158), Expect(2) = 5e-025
Identities = 32/49 (65%), Positives = 36/49 (73%)
Frame = -3 / -1
Query: 260 ARRASTTWSTQLQ*RPTSSRNWDGRSGR*RNPLRKPLSSASMLGFSRTW 114
ARRAS TW T+L+*RPTSSR+W G +GR R P R P SSAS GFS W
Sbjct: 456 ARRASVTWITRLR*RPTSSRSWGGAAGRWRRPSRTPSSSASRPGFSTMW 310
Score = 72.1 bits (151), Expect(2) = 4e-024
Identities = 31/41 (75%), Positives = 32/41 (78%)
Frame = +2 / +3
Query: 110 PSTSSKNPACWQNSTVSAMGSFSGLTFHPSFLSLSDVIGAG 232
PSTSS+NPACWQN TVS M S S HPSFLSLS VIGAG
Sbjct: 306 PSTSSRNPACWQNLTVSVMVSSSDRQLHPSFLSLSVVIGAG 428
Score = 68.0 bits (142), Expect(2) = 3e-030
Identities = 30/52 (57%), Positives = 33/52 (63%)
Frame = +3 / +1
Query: 279 QGTSSSAAPAGHAR**NEERKCACRRLVVSRTQAGEHRQCP*RRRCAKACPS 434
QGT S A PAG R**+ R+CACRR R E R+C RRRCA ACPS
Sbjct: 472 QGTYS*ACPAGRGR**HAARRCACRRPQAPRRAGAERRRCRARRRCATACPS 627
Score = 59.7 bits (124), Expect(2) = 4e-024
Identities = 28/40 (70%), Positives = 30/40 (75%)
Frame = +2 / +3
Query: 314 RALMK*GAQMCLPEACGVSYTSRRASAVSLTSTMCQSLSL 433
RA+M GAQMCLP A G S + RASAVS TSTMC SLSL
Sbjct: 507 RAVMTCGAQMCLPTASGAS*SRSRASAVSRTSTMCHSLSL 626
Score = 59.7 bits (124), Expect(2) = 5e-025
Identities = 28/52 (53%), Positives = 34/52 (65%)
Frame = -1 / -2
Query: 433 EGQALAHRRRQGHCRCSPACVRDTTSLRQAHLRSSFHQRA*PAGAAEDDVP* 278
EGQA+AHRRR H R S +R RQAHLR++ H R PAG A++ VP*
Sbjct: 626 EGQAVAHRRRARHRRRSAPALRGA*GRRQAHLRAACHHRPRPAGHAQEYVP* 471
Score = 22.1 bits (42), Expect(3) = 7e-050
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = -2 / -3
Query: 105 RFPPLYNII* 76
RFPP+YN I*
Sbjct: 292 RFPPIYNKI* 263
>gb|BF255832.2|BF255832 HVSMEf0007P02f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0007P02f, mRNA sequence
Length = 837
Score = 113 bits (241), Expect(3) = 3e-049
Identities = 46/133 (34%), Positives = 69/133 (51%)
Frame = -2 / +2
Query: 816 ITDPEREMLGPAVTGTINALKXXXXXXXXXXXXXXXXXXVEINPKDWPKDKIKDENCWSD 637
+ DP+ E+L PAV GT+N L+ V N K D + DE +S
Sbjct: 359 VKDPKAELLDPAVNGTLNVLRSCKKASIKRVIVTSSMAAVAYNGKPRTPDVVVDETWFSS 538
Query: 636 KEFCRNEENWYSVAKISSEEAALEYAKQTGLDVVTVNPAVVFGPLLQPTLNTSCQFLVYF 457
E C + WY ++K +EEAA ++AK G +++T+NP +V GPLLQPTLN+ + ++ F
Sbjct: 539 AEVCEKNKQWYVLSKTLAEEAAWKFAKDNGFEIITINPTMVIGPLLQPTLNSCAEAILKF 718
Query: 456 LKGGPDRMRDKLW 418
+ G W
Sbjct: 719 INGSSSTSPISAW 757
Score = 65.2 bits (136), Expect(3) = 3e-049
Identities = 28/47 (59%), Positives = 32/47 (68%)
Frame = -2 / +2
Query: 1101 RTEEAAGSAETACVTXAXXXIASWLVKLLLSRGYTVHGTVRDLSDNK 961
R E ++G + CVT A IASWLVKLLL RGYTV TVRD +D K
Sbjct: 74 RGEMSSGMGKVVCVTGASGYIASWLVKLLLHRGYTVRATVRDTADPK 214
Score = 56.1 bits (116), Expect(3) = 3e-049
Identities = 23/44 (52%), Positives = 28/44 (63%)
Frame = -2 / +2
Query: 963 KTAHLKRLENASENLKLFKADVLDYDAMAGAVAGCQGVFHVATP 832
KT HL+ LE A E L LFKA +L+ A+AGC VFH A+P
Sbjct: 215 KTLHLQALEGAKERLHLFKASLLEEGTFDAAIAGCDCVFHTASP 346
>gb|BU986537.1|BU986537 HF12C17r HF Hordeum vulgare subsp. vulgare cDNA clone HF12C17
5-PRIME, mRNA sequence
Length = 683
Score = 113 bits (241), Expect(3) = 3e-049
Identities = 46/118 (38%), Positives = 67/118 (56%)
Frame = -2 / +3
Query: 816 ITDPEREMLGPAVTGTINALKXXXXXXXXXXXXXXXXXXVEINPKDWPKDKIKDENCWSD 637
+ DP+ E+L PAV GT+N L+ V N K D + DE +S
Sbjct: 330 VKDPKAELLDPAVNGTLNVLRSCKKASIKRVIVTSSMAAVAYNGKPRTPDVVVDETWFSS 509
Query: 636 KEFCRNEENWYSVAKISSEEAALEYAKQTGLDVVTVNPAVVFGPLLQPTLNTSCQFLV 463
E C + WY ++K +EEAA ++AK GL+++T+NP +V GPLLQPTLNTS + ++
Sbjct: 510 AEVCEKNQQWYVLSKTLAEEAAWKFAKDNGLEIITINPTMVIGPLLQPTLNTSAEAIL 683
Score = 65.2 bits (136), Expect(3) = 3e-049
Identities = 28/47 (59%), Positives = 32/47 (68%)
Frame = -2 / +3
Query: 1101 RTEEAAGSAETACVTXAXXXIASWLVKLLLSRGYTVHGTVRDLSDNK 961
R E ++G + CVT A IASWLVKLLL RGYTV TVRD +D K
Sbjct: 45 RGEMSSGMGKVVCVTGASGYIASWLVKLLLHRGYTVRATVRDTADPK 185
Score = 56.1 bits (116), Expect(3) = 3e-049
Identities = 23/44 (52%), Positives = 28/44 (63%)
Frame = -2 / +3
Query: 963 KTAHLKRLENASENLKLFKADVLDYDAMAGAVAGCQGVFHVATP 832
KT HL+ LE A E L LFKA +L+ A+AGC VFH A+P
Sbjct: 186 KTLHLQALEGAKERLHLFKASLLEEGTFDAAIAGCDCVFHTASP 317
>gb|BQ470739.1|BQ470739 HX03O06r HX Hordeum vulgare subsp. vulgare cDNA clone HX03O06
5-PRIME, mRNA sequence
Length = 667
Score = 113 bits (241), Expect(3) = 3e-049
Identities = 46/118 (38%), Positives = 67/118 (56%)
Frame = -2 / +2
Query: 816 ITDPEREMLGPAVTGTINALKXXXXXXXXXXXXXXXXXXVEINPKDWPKDKIKDENCWSD 637
+ DP+ E+L PAV GT+N L+ V N K D + DE +S
Sbjct: 314 VKDPKAELLDPAVNGTLNVLRSCKKASIKRVIVTSSMAAVAYNGKPRTPDVVVDETWFSS 493
Query: 636 KEFCRNEENWYSVAKISSEEAALEYAKQTGLDVVTVNPAVVFGPLLQPTLNTSCQFLV 463
E C + WY ++K +EEAA ++AK GL+++T+NP +V GPLLQPTLNTS + ++
Sbjct: 494 AEVCEKNQQWYVLSKTLAEEAAWKFAKDNGLEIITINPTMVIGPLLQPTLNTSAEAIL 667
Score = 65.2 bits (136), Expect(3) = 3e-049
Identities = 28/47 (59%), Positives = 32/47 (68%)
Frame = -2 / +2
Query: 1101 RTEEAAGSAETACVTXAXXXIASWLVKLLLSRGYTVHGTVRDLSDNK 961
R E ++G + CVT A IASWLVKLLL RGYTV TVRD +D K
Sbjct: 29 RGEMSSGMGKVVCVTGASGYIASWLVKLLLHRGYTVRATVRDTADPK 169
Score = 56.1 bits (116), Expect(3) = 3e-049
Identities = 23/44 (52%), Positives = 28/44 (63%)
Frame = -2 / +2
Query: 963 KTAHLKRLENASENLKLFKADVLDYDAMAGAVAGCQGVFHVATP 832
KT HL+ LE A E L LFKA +L+ A+AGC VFH A+P
Sbjct: 170 KTLHLQALEGAKERLHLFKASLLEEGTFDAAIAGCDCVFHTASP 301
>gb|AV836830.1|AV836830 AV836830 K. Sato unpublished cDNA library: Hordeum vulgare subsp.
vulgare seedling leaves second leaf stage Hordeum
vulgare subsp. vulgare cDNA clone basd27a15, mRNA
sequence
Length = 735
Score = 194 bits (419), Expect = 6e-049
Identities = 79/167 (47%), Positives = 111/167 (66%)
Frame = -2 / -1
Query: 609 WYSVAKISSEEAALEYAKQTGLDVVTVNPAVVFGPLLQPTLNTSCQFLVYFLKGGPDRMR 430
WY +AK +E+ EYA++ L+ VTV P +V GP LQ +NT+ + L+Y +KGGP+ +
Sbjct: 732 WYCLAKTVAEQTVWEYAEKNELNAVTVCPCIVLGPQLQRVVNTTSELLLYVIKGGPNVLN 553
Query: 429 DKLWHIVDVRDTADALLLVYETPQASGRHICAPHFISARDLLELLKTMYPDDYPFISKES 250
D LWHIVDVRD ADALLLVYE P++SGR+ICAP++IS +LELLK YPD K
Sbjct: 552 DMLWHIVDVRDVADALLLVYEKPESSGRYICAPNYISTNAMLELLKKTYPDYNYVKCKAD 373
Query: 249 IYDMEHPAPMTSDKLKKLGWKVRPLKEPIAETVEFCQHAGFFEDVEG 109
++ +TS KL LGWK R L+E + +++++ + G +D EG
Sbjct: 372 VHQNSPTTLITSGKLNDLGWKPRALEETLLDSIDYYRKTGILQDGEG 232
>gb|CA032017.1|CA032017 HX11M09r HX Hordeum vulgare subsp. vulgare cDNA clone HX11M09
5-PRIME, mRNA sequence
Length = 647
Score = 135 bits (289), Expect(3) = 8e-049
Identities = 56/89 (62%), Positives = 68/89 (76%)
Frame = -2 / +2
Query: 1020 LLLSRGYTVHGTVRDLSDNKTAHLKRLENASENLKLFKADVLDYDAMAGAVAGCQGVFHV 841
LL YTV GTVRD + K AHLK LE A E L+L AD+L+YD++A AVAGC GVFHV
Sbjct: 206 LLSKGHYTVRGTVRDPGNAKNAHLKALEGAGERLQLLSADLLNYDSIASAVAGCDGVFHV 385
Query: 840 ATPVPSGKITDPEREMLGPAVTGTINALK 754
A+PVPSG+ T+PE E++ PAVTGT+N LK
Sbjct: 386 ASPVPSGRSTNPEEEVIAPAVTGTLNVLK 472
Score = 83.5 bits (176), Expect(3) = 7e-027
Identities = 49/106 (46%), Positives = 53/106 (50%)
Frame = +2 / -3
Query: 686 GLISXXXXXXXXXXXXXXXXXXXLSAFMVPVTAGPSISRSGSVIFPEGTGVAT*KTPWHP 865
GL+ F VPVTAG S SG V PEGTG+AT KTP P
Sbjct: 540 GLLDTAATEDTMTTRLTFAS*QAFKTFSVPVTAGAITSSSGLVDLPEGTGLATWKTPSQP 361
Query: 866 ATAPAIAS*SRTSALKSLRFSEAFSNRFR*AVLLSLRSRTVPWTV* 1003
ATA A+ S* SAL S S A S+ R*A L SRTVP TV*
Sbjct: 360 ATADAMLS*FSRSALSSCNLSPAPSSALR*AFLALPGSRTVPRTV* 223
Score = 51.9 bits (107), Expect(3) = 8e-049
Identities = 17/37 (45%), Positives = 25/37 (67%)
Frame = -2 / +2
Query: 690 NPKDWPKDKIKDENCWSDKEFCRNEENWYSVAKISSE 580
N +WPK K DE+ WSD++ CR E+WY ++K +E
Sbjct: 533 NNPNWPKGKFFDEDSWSDEDLCRKGEDWYFLSKTLAE 643
Score = 46.0 bits (94), Expect(3) = 8e-049
Identities = 19/30 (63%), Positives = 23/30 (76%)
Frame = -2 / +2
Query: 1089 AAGSAETACVTXAXXXIASWLVKLLLSRGY 1000
AA + +T CVT A IASWLVKLLLS+G+
Sbjct: 134 AAAARKTVCVTGAGGFIASWLVKLLLSKGH 223
Score = 40.5 bits (82), Expect(3) = 7e-027
Identities = 19/31 (61%), Positives = 21/31 (67%)
Frame = +2 / -3
Query: 1004 PRERRSLTSHEAMXXXAXVTHAVSALPAASS 1096
P ERRSLTSHEAM A VTH V AA++
Sbjct: 219 PLERRSLTSHEAMKPPAPVTHTVFLAAAAAA 127
Score = 35.0 bits (70), Expect(3) = 7e-027
Identities = 18/33 (54%), Positives = 20/33 (60%)
Frame = +2 / -3
Query: 581 SDEILATEYQFSSFLQNSLSDQQFSSLILSLGQ 679
S +L +YQ S FLQ S SDQ SS L LGQ
Sbjct: 642 SASVLERKYQSSPFLQRSSSDQLSSSKNLPLGQ 544
>gb|BJ466618.1|BJ466618 BJ466618 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags33a09 3', mRNA sequence
Length = 681
Score = 175 bits (377), Expect(2) = 8e-049
Identities = 65/132 (49%), Positives = 96/132 (72%)
Frame = -2 / -1
Query: 675 PKDKIKDENCWSDKEFCRNEENWYSVAKISSEEAALEYAKQTGLDVVTVNPAVVFGPLLQ 496
PK K+ E+ WSD++ CR E+WY ++K +E A YA +TG+DVV + P++V GPL+Q
Sbjct: 681 PKGKVFTEDSWSDEDLCRKGEDWYLLSKTRAEREAFAYAAKTGMDVVAILPSLVLGPLMQ 502
Query: 495 PTLNTSCQFLVYFLKGGPDRMRDKLWHIVDVRDTADALLLVYETPQASGRHICAPHFISA 316
PT+N S + L+ +LKG + + ++ W++VDVRD ADALLL YE P+ASGR+IC+P I
Sbjct: 501 PTVNASSKILLKYLKGEHETVENRFWNLVDVRDVADALLLAYENPEASGRYICSPVRIKV 322
Query: 315 RDLLELLKTMYP 280
D++ +LKT+YP
Sbjct: 321 SDVINILKTLYP 286
Score = 39.1 bits (79), Expect(2) = 8e-049
Identities = 14/38 (36%), Positives = 27/38 (71%)
Frame = -2 / -1
Query: 243 DMEHPAPMTSDKLKKLGWKVRPLKEPIAETVEFCQHAG 130
++E M+S+KL+KLGW RP+++ + ++VE + +G
Sbjct: 258 EVEEGKVMSSEKLQKLGWTFRPVEKTLGDSVESYKASG 145
>gb|BJ466412.1|BJ466412 BJ466412 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags32a03 3', mRNA sequence
Length = 663
Score = 175 bits (377), Expect(2) = 8e-049
Identities = 65/132 (49%), Positives = 96/132 (72%)
Frame = -2 / -1
Query: 675 PKDKIKDENCWSDKEFCRNEENWYSVAKISSEEAALEYAKQTGLDVVTVNPAVVFGPLLQ 496
PK K+ E+ WSD++ CR E+WY ++K +E A YA +TG+DVV + P++V GPL+Q
Sbjct: 663 PKGKVFTEDSWSDEDLCRKGEDWYLLSKTRAEREAFAYAAKTGMDVVAILPSLVLGPLMQ 484
Query: 495 PTLNTSCQFLVYFLKGGPDRMRDKLWHIVDVRDTADALLLVYETPQASGRHICAPHFISA 316
PT+N S + L+ +LKG + + ++ W++VDVRD ADALLL YE P+ASGR+IC+P I
Sbjct: 483 PTVNASSKILLKYLKGEHETVENRFWNLVDVRDVADALLLAYENPEASGRYICSPVRIKV 304
Query: 315 RDLLELLKTMYP 280
D++ +LKT+YP
Sbjct: 303 SDVINILKTLYP 268
Score = 39.1 bits (79), Expect(2) = 8e-049
Identities = 14/38 (36%), Positives = 27/38 (71%)
Frame = -2 / -1
Query: 243 DMEHPAPMTSDKLKKLGWKVRPLKEPIAETVEFCQHAG 130
++E M+S+KL+KLGW RP+++ + ++VE + +G
Sbjct: 240 EVEEGKVMSSEKLQKLGWTFRPVEKTLGDSVESYKASG 127
>gb|AV914084.1|AV914084 AV914084 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags4k02 5', mRNA sequence
Length = 593
Score = 182 bits (392), Expect(2) = 1e-048
Identities = 67/137 (48%), Positives = 99/137 (72%)
Frame = -2 / +3
Query: 690 NPKDWPKDKIKDENCWSDKEFCRNEENWYSVAKISSEEAALEYAKQTGLDVVTVNPAVVF 511
N +WPK K+ E+ WSD++ CR E+WY ++K +E A YA +TG+DVV + P++V
Sbjct: 84 NNPNWPKGKVFTEDSWSDEDLCRKGEDWYLLSKTRAEREAFAYAAKTGMDVVAILPSLVL 263
Query: 510 GPLLQPTLNTSCQFLVYFLKGGPDRMRDKLWHIVDVRDTADALLLVYETPQASGRHICAP 331
GPL+QPT+N S + L+ +LKG + + ++ W++VDVRD ADALLL YE P+ASGR+IC+P
Sbjct: 264 GPLMQPTVNASSKILLKYLKGEHETVENRFWNLVDVRDVADALLLAYENPEASGRYICSP 443
Query: 330 HFISARDLLELLKTMYP 280
I D++ +LKT+YP
Sbjct: 444 VRIKVSDVINILKTLYP 494
Score = 31.8 bits (63), Expect(2) = 1e-048
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -2 / +3
Query: 243 DMEHPAPMTSDKLKKLGWKVRPLK 172
++E M+S+KL+KLGW RP++
Sbjct: 522 EVEEGKVMSSEKLQKLGWTFRPVE 593
>gb|BE215014.1|BE215014 HV_CEb0005I17f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0005I17f, mRNA sequence
Length = 622
Score = 137 bits (293), Expect(3) = 2e-048
Identities = 57/89 (64%), Positives = 68/89 (76%)
Frame = -2 / +3
Query: 1020 LLLSRGYTVHGTVRDLSDNKTAHLKRLENASENLKLFKADVLDYDAMAGAVAGCQGVFHV 841
LL YTV GTVRD + K AHLK LE A E L+L AD+LDYD++A AVAGC+GVFHV
Sbjct: 135 LLSKAHYTVRGTVRDPGNAKNAHLKALEGAGERLQLLSADLLDYDSIASAVAGCEGVFHV 314
Query: 840 ATPVPSGKITDPEREMLGPAVTGTINALK 754
A+PVPSG+ T+PE E + PAVTGT+N LK
Sbjct: 315 ASPVPSGRSTNPEEEGIAPAVTGTLNVLK 401
Score = 87.2 bits (184), Expect(3) = 1e-024
Identities = 49/82 (59%), Positives = 53/82 (64%)
Frame = +2 / -1
Query: 758 SAFMVPVTAGPSISRSGSVIFPEGTGVAT*KTPWHPATAPAIAS*SRTSALKSLRFSEAF 937
+ F VPVTAG S SG V PEGTG+AT*KTP PATA A+ S*S SAL S S A
Sbjct: 397 NTFSVPVTAGAIPSSSGLVDLPEGTGLAT*KTPSQPATADAMLS*SSRSALSSCSLSPAP 218
Query: 938 SNRFR*AVLLSLRSRTVPWTV* 1003
S+ R*A L SRTVP TV*
Sbjct: 217 SSALR*AFLALPGSRTVPRTV* 152
Score = 52.4 bits (108), Expect(3) = 2e-048
Identities = 16/52 (30%), Positives = 31/52 (59%)
Frame = -2 / +3
Query: 693 INPKDWPKDKIKDENCWSDKEFCRNEENWYSVAKISSEEAALEYAKQTGLDV 538
+N +WPK K+ E+ W+D++ C+ E+WY ++K ++ +TG+ V
Sbjct: 456 VNNPNWPKGKVFTEDSWADEDLCQKGEDWYLLSKTPAKRGGFCLCHETGMGV 611
Score = 42.3 bits (86), Expect(3) = 2e-048
Identities = 18/34 (52%), Positives = 21/34 (61%)
Frame = -2 / +3
Query: 1101 RTEEAAGSAETACVTXAXXXIASWLVKLLLSRGY 1000
R EAA CVT A +ASWLVKLLLS+ +
Sbjct: 51 RGMEAAAKRSVVCVTGAGGFVASWLVKLLLSKAH 152
Score = 35.4 bits (71), Expect(3) = 1e-024
Identities = 18/31 (58%), Positives = 18/31 (58%)
Frame = +2 / -1
Query: 1010 ERRSLTSHEAMXXXAXVTHAVSALPAASSVR 1102
ERRSLTSHEA A VTH AAS R
Sbjct: 142 ERRSLTSHEATKPPAPVTHTTLLFAAASIPR 50
Score = 28.6 bits (56), Expect(3) = 1e-024
Identities = 16/52 (30%), Positives = 23/52 (44%)
Frame = +1 / -3
Query: 538 NIQPGLLRVFKCGLF*RDLGDRIPVLFVPAELFI*PAVLIFDLVFGPVFRVD 693
N P + K G +IP+L + A++ + PAV GPV VD
Sbjct: 611 NTHPSFVA*AKASPLCGGFGKQIPILTLLAQILVCPAVFSKYFALGPVRIVD 456
>gb|AV913397.1|AV913397 AV913397 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags21o15 5', mRNA sequence
Length = 521
Score = 138 bits (297), Expect(3) = 5e-048
Identities = 57/89 (64%), Positives = 69/89 (77%)
Frame = -2 / +1
Query: 1020 LLLSRGYTVHGTVRDLSDNKTAHLKRLENASENLKLFKADVLDYDAMAGAVAGCQGVFHV 841
LL YTV GTVRD + K AHLK LE A E L+L AD+LDYD++A AVAGC+GVFHV
Sbjct: 43 LLSKAHYTVRGTVRDPGNAKNAHLKALEGAGERLQLLSADLLDYDSIASAVAGCEGVFHV 222
Query: 840 ATPVPSGKITDPEREMLGPAVTGTINALK 754
A+PVPSG+ T+PE E++ PAVTGT+N LK
Sbjct: 223 ASPVPSGRSTNPEEEVIAPAVTGTLNVLK 309
Score = 63.4 bits (132), Expect(3) = 5e-048
Identities = 21/50 (42%), Positives = 32/50 (64%)
Frame = -2 / +1
Query: 690 NPKDWPKDKIKDENCWSDKEFCRNEENWYSVAKISSEEAALEYAKQTGLD 541
N +WPK K+ E+ W D++ CR E+WY ++K +E A YA +TG+D
Sbjct: 370 NNPNWPKGKVFTEDSWXDEDLCRKGEDWYLLSKTRAEREAFAYAAKTGMD 519
Score = 28.1 bits (55), Expect(3) = 5e-048
Identities = 10/14 (71%), Positives = 13/14 (92%)
Frame = -2 / +1
Query: 1041 IASWLVKLLLSRGY 1000
+ASWLVKLLLS+ +
Sbjct: 19 VASWLVKLLLSKAH 60
>gb|AV920406.1|AV920406 AV920406 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags13n08 3', mRNA sequence
Length = 662
Score = 172 bits (370), Expect(2) = 8e-048
Identities = 64/131 (48%), Positives = 95/131 (72%)
Frame = -2 / -3
Query: 672 KDKIKDENCWSDKEFCRNEENWYSVAKISSEEAALEYAKQTGLDVVTVNPAVVFGPLLQP 493
K K+ E+ WSD++ CR E+WY ++K +E A YA +TG+DVV + P++V GPL+QP
Sbjct: 660 KGKVFTEDSWSDEDLCRKGEDWYLLSKTRAEREAFAYAAKTGMDVVAILPSLVLGPLMQP 481
Query: 492 TLNTSCQFLVYFLKGGPDRMRDKLWHIVDVRDTADALLLVYETPQASGRHICAPHFISAR 313
T+N S + L+ +LKG + + ++ W++VDVRD ADALLL YE P+ASGR+IC+P I
Sbjct: 480 TVNASSKILLKYLKGEHETVENRFWNLVDVRDVADALLLAYENPEASGRYICSPVRIKVS 301
Query: 312 DLLELLKTMYP 280
D++ +LKT+YP
Sbjct: 300 DVINILKTLYP 268
Score = 39.1 bits (79), Expect(2) = 8e-048
Identities = 14/38 (36%), Positives = 27/38 (71%)
Frame = -2 / -3
Query: 243 DMEHPAPMTSDKLKKLGWKVRPLKEPIAETVEFCQHAG 130
++E M+S+KL+KLGW RP+++ + ++VE + +G
Sbjct: 240 EVEEGKVMSSEKLQKLGWTFRPVEKTLGDSVESYKASG 127
>gb|AV919693.1|AV919693 AV919693 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags7d04 3', mRNA sequence
Length = 661
Score = 172 bits (370), Expect(2) = 8e-048
Identities = 64/131 (48%), Positives = 95/131 (72%)
Frame = -2 / -1
Query: 672 KDKIKDENCWSDKEFCRNEENWYSVAKISSEEAALEYAKQTGLDVVTVNPAVVFGPLLQP 493
K K+ E+ WSD++ CR E+WY ++K +E A YA +TG+DVV + P++V GPL+QP
Sbjct: 661 KGKVFTEDSWSDEDLCRKGEDWYLLSKTRAEREAFAYAAKTGMDVVAILPSLVLGPLMQP 482
Query: 492 TLNTSCQFLVYFLKGGPDRMRDKLWHIVDVRDTADALLLVYETPQASGRHICAPHFISAR 313
T+N S + L+ +LKG + + ++ W++VDVRD ADALLL YE P+ASGR+IC+P I
Sbjct: 481 TVNASSKILLKYLKGEHETVENRFWNLVDVRDVADALLLAYENPEASGRYICSPVRIKVS 302
Query: 312 DLLELLKTMYP 280
D++ +LKT+YP
Sbjct: 301 DVINILKTLYP 269
Score = 39.1 bits (79), Expect(2) = 8e-048
Identities = 14/38 (36%), Positives = 27/38 (71%)
Frame = -2 / -1
Query: 243 DMEHPAPMTSDKLKKLGWKVRPLKEPIAETVEFCQHAG 130
++E M+S+KL+KLGW RP+++ + ++VE + +G
Sbjct: 241 EVEEGKVMSSEKLQKLGWTFRPVEKTLGDSVESYKASG 128
>gb|AV918687.1|AV918687 AV918687 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags21o04 3', mRNA sequence
Length = 630
Score = 172 bits (370), Expect(2) = 8e-048
Identities = 64/131 (48%), Positives = 95/131 (72%)
Frame = -2 / -1
Query: 672 KDKIKDENCWSDKEFCRNEENWYSVAKISSEEAALEYAKQTGLDVVTVNPAVVFGPLLQP 493
K K+ E+ WSD++ CR E+WY ++K +E A YA +TG+DVV + P++V GPL+QP
Sbjct: 630 KGKVFTEDSWSDEDLCRKGEDWYLLSKTRAEREAFAYAAKTGMDVVAILPSLVLGPLMQP 451
Query: 492 TLNTSCQFLVYFLKGGPDRMRDKLWHIVDVRDTADALLLVYETPQASGRHICAPHFISAR 313
T+N S + L+ +LKG + + ++ W++VDVRD ADALLL YE P+ASGR+IC+P I
Sbjct: 450 TVNASSKILLKYLKGEHETVENRFWNLVDVRDVADALLLAYENPEASGRYICSPVRIKVS 271
Query: 312 DLLELLKTMYP 280
D++ +LKT+YP
Sbjct: 270 DVINILKTLYP 238
Score = 39.1 bits (79), Expect(2) = 8e-048
Identities = 14/38 (36%), Positives = 27/38 (71%)
Frame = -2 / -1
Query: 243 DMEHPAPMTSDKLKKLGWKVRPLKEPIAETVEFCQHAG 130
++E M+S+KL+KLGW RP+++ + ++VE + +G
Sbjct: 210 EVEEGKVMSSEKLQKLGWTFRPVEKTLGDSVESYKASG 97
>gb|CA031581.1|CA031581 HX10G17r HX Hordeum vulgare subsp. vulgare cDNA clone HX10G17
5-PRIME, mRNA sequence
Length = 622
Score = 135 bits (289), Expect(3) = 1e-047
Identities = 56/89 (62%), Positives = 68/89 (76%)
Frame = -2 / +1
Query: 1020 LLLSRGYTVHGTVRDLSDNKTAHLKRLENASENLKLFKADVLDYDAMAGAVAGCQGVFHV 841
LL YTV GTVRD + K AHLK LE A E L+L AD+L+YD++A AVAGC GVFHV
Sbjct: 205 LLSKGHYTVRGTVRDPGNAKNAHLKALEGAGERLQLLSADLLNYDSIASAVAGCDGVFHV 384
Query: 840 ATPVPSGKITDPEREMLGPAVTGTINALK 754
A+PVPSG+ T+PE E++ PAVTGT+N LK
Sbjct: 385 ASPVPSGRSTNPEEEVIAPAVTGTLNVLK 471
Score = 83.5 bits (176), Expect(3) = 6e-026
Identities = 49/106 (46%), Positives = 53/106 (50%)
Frame = +2 / -3
Query: 686 GLISXXXXXXXXXXXXXXXXXXXLSAFMVPVTAGPSISRSGSVIFPEGTGVAT*KTPWHP 865
GL+ F VPVTAG S SG V PEGTG+AT KTP P
Sbjct: 539 GLLDTAATEDTMTTRLTFAS*QAFKTFSVPVTAGAITSSSGLVDLPEGTGLATWKTPSQP 360
Query: 866 ATAPAIAS*SRTSALKSLRFSEAFSNRFR*AVLLSLRSRTVPWTV* 1003
ATA A+ S* SAL S S A S+ R*A L SRTVP TV*
Sbjct: 359 ATADAMLS*FSRSALSSCNLSPAPSSALR*AFLALPGSRTVPRTV* 222
Score = 48.3 bits (99), Expect(3) = 1e-047
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = -2 / +1
Query: 690 NPKDWPKDKIKDENCWSDKEFCRNEENWY 604
N +WPK K DE+ WSD++ CR E+WY
Sbjct: 532 NNPNWPKGKFFDEDSWSDEDLCRKGEDWY 618
Score = 46.0 bits (94), Expect(3) = 1e-047
Identities = 19/30 (63%), Positives = 23/30 (76%)
Frame = -2 / +1
Query: 1089 AAGSAETACVTXAXXXIASWLVKLLLSRGY 1000
AA + +T CVT A IASWLVKLLLS+G+
Sbjct: 133 AAAARKTVCVTGAGGFIASWLVKLLLSKGH 222
Score = 40.5 bits (82), Expect(3) = 6e-026
Identities = 19/31 (61%), Positives = 21/31 (67%)
Frame = +2 / -3
Query: 1004 PRERRSLTSHEAMXXXAXVTHAVSALPAASS 1096
P ERRSLTSHEAM A VTH V AA++
Sbjct: 218 PLERRSLTSHEAMKPPAPVTHTVFLAAAAAA 126
Score = 31.8 bits (63), Expect(3) = 6e-026
Identities = 16/26 (61%), Positives = 17/26 (65%)
Frame = +2 / -3
Query: 602 EYQFSSFLQNSLSDQQFSSLILSLGQ 679
+YQ S FLQ S SDQ SS L LGQ
Sbjct: 620 KYQSSPFLQRSSSDQLSSSKNLPLGQ 543
>gb|AV913390.1|AV913390 AV913390 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags21o04 5', mRNA sequence
Length = 518
Score = 138 bits (297), Expect(3) = 1e-047
Identities = 57/89 (64%), Positives = 69/89 (77%)
Frame = -2 / +2
Query: 1020 LLLSRGYTVHGTVRDLSDNKTAHLKRLENASENLKLFKADVLDYDAMAGAVAGCQGVFHV 841
LL YTV GTVRD + K AHLK LE A E L+L AD+LDYD++A AVAGC+GVFHV
Sbjct: 44 LLSKAHYTVRGTVRDPGNAKNAHLKALEGAGERLQLLSADLLDYDSIASAVAGCEGVFHV 223
Query: 840 ATPVPSGKITDPEREMLGPAVTGTINALK 754
A+PVPSG+ T+PE E++ PAVTGT+N LK
Sbjct: 224 ASPVPSGRSTNPEEEVIAPAVTGTLNVLK 310
Score = 62.5 bits (130), Expect(3) = 1e-047
Identities = 21/49 (42%), Positives = 32/49 (65%)
Frame = -2 / +2
Query: 690 NPKDWPKDKIKDENCWSDKEFCRNEENWYSVAKISSEEAALEYAKQTGL 544
N +WPK K+ E+ WSD++ CR E+WY ++K +E A YA +TG+
Sbjct: 371 NNPNWPKGKVFTEDSWSDEDLCRKGEDWYLLSKTRAEREAFAYAAKTGM 517
Score = 28.1 bits (55), Expect(3) = 1e-047
Identities = 10/14 (71%), Positives = 13/14 (92%)
Frame = -2 / +2
Query: 1041 IASWLVKLLLSRGY 1000
+ASWLVKLLLS+ +
Sbjct: 20 VASWLVKLLLSKAH 61
>gb|AV914608.1|AV914608 AV914608 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags7d04 5', mRNA sequence
Length = 514
Score = 138 bits (297), Expect(3) = 3e-047
Identities = 57/89 (64%), Positives = 69/89 (77%)
Frame = -2 / +2
Query: 1020 LLLSRGYTVHGTVRDLSDNKTAHLKRLENASENLKLFKADVLDYDAMAGAVAGCQGVFHV 841
LL YTV GTVRD + K AHLK LE A E L+L AD+LDYD++A AVAGC+GVFHV
Sbjct: 95 LLSKAHYTVRGTVRDPGNAKNAHLKALEGAGERLQLLSADLLDYDSIASAVAGCEGVFHV 274
Query: 840 ATPVPSGKITDPEREMLGPAVTGTINALK 754
A+PVPSG+ T+PE E++ PAVTGT+N LK
Sbjct: 275 ASPVPSGRSTNPEEEVIAPAVTGTLNVLK 361
Score = 89.0 bits (188), Expect(2) = 7e-022
Identities = 54/122 (44%), Positives = 61/122 (50%)
Frame = +2 / -2
Query: 638 SDQQFSSLILSLGQSFGLISXXXXXXXXXXXXXXXXXXXLSAFMVPVTAGPSISRSGSVI 817
S Q SS+ GL++ + F VPVTAG S SG V
Sbjct: 477 SSDQLSSVNTLPLGQLGLLNTAAHEDTMTTRLTFASLQAFNTFSVPVTAGAITSSSGLVD 298
Query: 818 FPEGTGVAT*KTPWHPATAPAIAS*SRTSALKSLRFSEAFSNRFR*AVLLSLRSRTVPWT 997
PEGTG+AT KTP PATA A+ S*S SAL S S A S+ R*A L SRTVP T
Sbjct: 297 LPEGTGLATWKTPSQPATADAMLS*SSRSALSSCSLSPAPSSALR*AFLALPGSRTVPRT 118
Query: 998 V* 1003
V*
Sbjct: 117 V* 112
Score = 46.4 bits (95), Expect(3) = 3e-047
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = -2 / +2
Query: 690 NPKDWPKDKIKDENCWSDKEFCRNEENWY 604
N +WPK K+ E+ WSD++ CR E+WY
Sbjct: 422 NNPNWPKGKVFTEDSWSDEDLCRKGEDWY 508
Score = 42.3 bits (86), Expect(3) = 3e-047
Identities = 18/34 (52%), Positives = 21/34 (61%)
Frame = -2 / +2
Query: 1101 RTEEAAGSAETACVTXAXXXIASWLVKLLLSRGY 1000
R EAA CVT A +ASWLVKLLLS+ +
Sbjct: 11 RGMEAAAXRSVVCVTGAGGFVASWLVKLLLSKAH 112
Score = 35.4 bits (71), Expect(2) = 7e-022
Identities = 18/31 (58%), Positives = 18/31 (58%)
Frame = +2 / -2
Query: 1010 ERRSLTSHEAMXXXAXVTHAVSALPAASSVR 1102
ERRSLTSHEA A VTH AAS R
Sbjct: 102 ERRSLTSHEATKPPAPVTHTTLLFAAASIPR 10
>gb|CA007645.1|CA007645 HU08J12r HU Hordeum vulgare subsp. vulgare cDNA clone HU08J12
5-PRIME, mRNA sequence
Length = 511
Score = 138 bits (297), Expect(3) = 5e-047
Identities = 57/89 (64%), Positives = 69/89 (77%)
Frame = -2 / +1
Query: 1020 LLLSRGYTVHGTVRDLSDNKTAHLKRLENASENLKLFKADVLDYDAMAGAVAGCQGVFHV 841
LL YTV GTVRD + K AHLK LE A E L+L AD+LDYD++A AVAGC+GVFHV
Sbjct: 70 LLSKAHYTVRGTVRDPGNAKNAHLKALEGAGERLQLLSADLLDYDSIASAVAGCEGVFHV 249
Query: 840 ATPVPSGKITDPEREMLGPAVTGTINALK 754
A+PVPSG+ T+PE E++ PAVTGT+N LK
Sbjct: 250 ASPVPSGRSTNPEEEVIAPAVTGTLNVLK 336
Score = 50.6 bits (104), Expect(3) = 5e-047
Identities = 16/37 (43%), Positives = 25/37 (67%)
Frame = -2 / +1
Query: 690 NPKDWPKDKIKDENCWSDKEFCRNEENWYSVAKISSE 580
N +WPK K+ E+ WSD++ CR E+WY ++K +E
Sbjct: 397 NNPNWPKGKVFTEDSWSDEDLCRKGEDWYLLSKTRAE 507
Score = 37.7 bits (76), Expect(3) = 5e-047
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = -2 / +1
Query: 1086 AGSAETACVTXAXXXIASWLVKLLLSRGY 1000
A CVT A +ASWLVKLLLS+ +
Sbjct: 1 AAKRSVVCVTGAGGFVASWLVKLLLSKAH 87
>gb|BE602876.2|BE602876 HVSMEh0100H17f Hordeum vulgare 5-45 DAP spike EST library HVcDNA0009
(5 to 45 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEh0100H17f, mRNA sequence
Length = 505
Score = 138 bits (297), Expect(3) = 5e-047
Identities = 57/89 (64%), Positives = 69/89 (77%)
Frame = -2 / +1
Query: 1020 LLLSRGYTVHGTVRDLSDNKTAHLKRLENASENLKLFKADVLDYDAMAGAVAGCQGVFHV 841
LL YTV GTVRD + K AHLK LE A E L+L AD+LDYD++A AVAGC+GVFHV
Sbjct: 73 LLSKAHYTVRGTVRDPGNAKNAHLKALEGAGERLQLLSADLLDYDSIASAVAGCEGVFHV 252
Query: 840 ATPVPSGKITDPEREMLGPAVTGTINALK 754
A+PVPSG+ T+PE E++ PAVTGT+N LK
Sbjct: 253 ASPVPSGRSTNPEEEVIAPAVTGTLNVLK 339
Score = 89.0 bits (188), Expect(2) = 5e-022
Identities = 54/122 (44%), Positives = 61/122 (50%)
Frame = +2 / -3
Query: 638 SDQQFSSLILSLGQSFGLISXXXXXXXXXXXXXXXXXXXLSAFMVPVTAGPSISRSGSVI 817
S Q SS+ GL++ + F VPVTAG S SG V
Sbjct: 455 SSDQLSSVNTLPLGQLGLLNTAAHEDTMTTRLTFASLQAFNTFSVPVTAGAITSSSGLVD 276
Query: 818 FPEGTGVAT*KTPWHPATAPAIAS*SRTSALKSLRFSEAFSNRFR*AVLLSLRSRTVPWT 997
PEGTG+AT KTP PATA A+ S*S SAL S S A S+ R*A L SRTVP T
Sbjct: 275 LPEGTGLATWKTPSQPATADAMLS*SSRSALSSCSLSPAPSSALR*AFLALPGSRTVPRT 96
Query: 998 V* 1003
V*
Sbjct: 95 V* 90
Score = 48.7 bits (100), Expect(3) = 5e-047
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = -2 / +1
Query: 690 NPKDWPKDKIKDENCWSDKEFCRNEENWYSVAK 592
N +WPK K+ E+ WSD++ CR E+WY ++K
Sbjct: 400 NNPNWPKGKVFTEDSWSDEDLCRKGEDWYLLSK 498
Score = 39.6 bits (80), Expect(3) = 5e-047
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = -2 / +1
Query: 1083 GSAETACVTXAXXXIASWLVKLLLSRGY 1000
G + CVT A +ASWLVKLLLS+ +
Sbjct: 7 GEEDVVCVTGAGGFVASWLVKLLLSKAH 90
Score = 35.9 bits (72), Expect(2) = 5e-022
Identities = 16/25 (64%), Positives = 17/25 (68%)
Frame = +2 / -3
Query: 1010 ERRSLTSHEAMXXXAXVTHAVSALP 1084
ERRSLTSHEA A VTH S+ P
Sbjct: 80 ERRSLTSHEATKPPAPVTHTTSSSP 6
>gb|AV919125.1|AV919125 AV919125 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags4k02 3', mRNA sequence
Length = 751
Score = 169 bits (363), Expect(2) = 7e-047
Identities = 63/132 (47%), Positives = 95/132 (71%)
Frame = -2 / -2
Query: 675 PKDKIKDENCWSDKEFCRNEENWYSVAKISSEEAALEYAKQTGLDVVTVNPAVVFGPLLQ 496
P+ K ++ WSD++ CR E+WY ++K +E A YA +TG+DVV + P++V GPL+Q
Sbjct: 666 PRAKYLLKDSWSDEDLCRKGEDWYLLSKTRAEREAFAYAAKTGMDVVAILPSLVLGPLMQ 487
Query: 495 PTLNTSCQFLVYFLKGGPDRMRDKLWHIVDVRDTADALLLVYETPQASGRHICAPHFISA 316
PT+N S + L+ +LKG + + ++ W++VDVRD ADALLL YE P+ASGR+IC+P I
Sbjct: 486 PTVNASSKILLKYLKGEHETVENRFWNLVDVRDVADALLLAYENPEASGRYICSPVRIKV 307
Query: 315 RDLLELLKTMYP 280
D++ +LKT+YP
Sbjct: 306 SDVINILKTLYP 271
Score = 39.1 bits (79), Expect(2) = 7e-047
Identities = 14/38 (36%), Positives = 27/38 (71%)
Frame = -2 / -2
Query: 243 DMEHPAPMTSDKLKKLGWKVRPLKEPIAETVEFCQHAG 130
++E M+S+KL+KLGW RP+++ + ++VE + +G
Sbjct: 243 EVEEGKVMSSEKLQKLGWTFRPVEKTLGDSVESYKASG 130
>gb|BM097482.2|BM097482 EBro05_SQ003_L07_R root, 3 week, reduced light, cv Optic, EBro05
Hordeum vulgare subsp. vulgare cDNA clone
EBro05_SQ003_L07 5', mRNA sequence
Length = 353
Score = 184 bits (396), Expect = 9e-046
Identities = 76/103 (73%), Positives = 84/103 (81%)
Frame = -2 / +1
Query: 1083 GSAETACVTXAXXXIASWLVKLLLSRGYTVHGTVRDLSDNKTAHLKRLENASENLKLFKA 904
G ET CVT A IASWLVKLLLSRGYTV GTVRDL + KT HL+ LENASENLKL KA
Sbjct: 43 GKGETVCVTGAGGYIASWLVKLLLSRGYTVRGTVRDLGEKKTGHLRSLENASENLKLIKA 222
Query: 903 DVLDYDAMAGAVAGCQGVFHVATPVPSGKITDPEREMLGPAVT 775
D+LD DAMA A+ GCQGVFHVA+PVP+G +TDPE E+LGPA T
Sbjct: 223 DLLDNDAMAAAIEGCQGVFHVASPVPTGDVTDPEVEVLGPAAT 351
Score = 145 bits (311), Expect = 5e-034
Identities = 70/104 (67%), Positives = 74/104 (71%)
Frame = +2 / -1
Query: 773 PVTAGPSISRSGSVIFPEGTGVAT*KTPWHPATAPAIAS*SRTSALKSLRFSEAFSNRFR 952
PV AGP S SGSV P GTG+AT KTPWHP+ A AIAS S SAL SLRFS+AFS+ R
Sbjct: 353 PVAAGPRTSTSGSVTSPVGTGLATWKTPWHPSMAAAIASLSSRSALISLRFSDAFSSDLR 174
Query: 953 *AVLLSLRSRTVPWTV*PRERRSLTSHEAMXXXAXVTHAVSALP 1084
V S RSRTVP TV*PRERRS TSHEAM A VTH VS P
Sbjct: 173 WPVFFSPRSRTVPRTV*PRERRSFTSHEAMYPPAPVTHTVSPFP 42
Score = 131 bits (281), Expect = 7e-030
Identities = 56/102 (54%), Positives = 74/102 (72%)
Frame = +1 / -3
Query: 778 NSRTQHLSLWIGDLP*RNRSGDMKDSLAPCDCTRHSVVVKDISLEKLEVFGSIL*PLQMS 957
+ RTQ+L+LWI +P RNR+GDM++SLA +RH V+++ I L+KLE+F +L* QM+
Sbjct: 348 SGRTQNLNLWISHIPRRNRAGDMENSLASLYGSRHRVIIEQIGLDKLEIFRCVL*RPQMA 169
Query: 958 GFIVTEVADGAVDGVATGEEELDEPRGDVXXGXRHARRLRAP 1083
G ++ +VADGA DGVA GEEEL EPRGDV G A RL P
Sbjct: 168 GLLLAKVADGAADGVAAGEEELHEPRGDVPAGAGDAHRLPFP 43
>gb|AW982651.2|AW982651 HVSMEg0003N13f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0003N13f, mRNA sequence
Length = 1042
Score = 101 bits (215), Expect(3) = 3e-045
Identities = 42/123 (34%), Positives = 64/123 (52%)
Frame = -2 / +1
Query: 816 ITDPEREMLGPAVTGTINALKXXXXXXXXXXXXXXXXXXVEINPKDWPKDKIKDENCWSD 637
+ DP+ E+L P V GT+N L+ N K D + DE +S
Sbjct: 283 VKDPKAELLDPTVNGTLNVLRSCKKASIKRVIVTSSMAACAYNGKPRTPDVVVDETWFSS 462
Query: 636 KEFCRNEENWYSVAKISSEEAALEYAKQTGLDVVTVNPAVVFGPLLQPTLNTSCQFLVYF 457
E C + WY ++K +EEAA ++AK G++ T+N + GPLLQPTLNT+ + ++ F
Sbjct: 463 AEVCEKNKQWYVLSKTLAEEAAWKFAKDNGIENNTINSTMGIGPLLQPTLNTNAEAILEF 642
Query: 456 LKG 448
+ G
Sbjct: 643 ING 651
Score = 63.8 bits (133), Expect(3) = 3e-045
Identities = 27/45 (60%), Positives = 31/45 (68%)
Frame = -2 / +1
Query: 1095 EEAAGSAETACVTXAXXXIASWLVKLLLSRGYTVHGTVRDLSDNK 961
E ++G + CVT A IASWLVKLLL RGYTV TVRD +D K
Sbjct: 4 EMSSGMGKVVCVTGASGYIASWLVKLLLHRGYTVRATVRDTADPK 138
Score = 56.1 bits (116), Expect(3) = 3e-045
Identities = 23/44 (52%), Positives = 28/44 (63%)
Frame = -2 / +1
Query: 963 KTAHLKRLENASENLKLFKADVLDYDAMAGAVAGCQGVFHVATP 832
KT HL+ LE A E L LFKA +L+ A+AGC VFH A+P
Sbjct: 139 KTLHLQALEGAKERLHLFKASLLEEGTFDAAIAGCDCVFHTASP 270
>gb|BG369084.2|BG369084 HVSMEi0021K17f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0021K17f, mRNA sequence
Length = 592
Score = 130 bits (278), Expect(2) = 8e-045
Identities = 52/79 (65%), Positives = 64/79 (81%)
Frame = -2 / +2
Query: 990 GTVRDLSDNKTAHLKRLENASENLKLFKADVLDYDAMAGAVAGCQGVFHVATPVPSGKIT 811
GTVRD + K AHLK LE A E L+L AD+LDYD++A AVAGC+GVFHVA+PVPSG+ T
Sbjct: 125 GTVRDPGNAKNAHLKALEGAGERLQLLSADLLDYDSIASAVAGCEGVFHVASPVPSGRST 304
Query: 810 DPEREMLGPAVTGTINALK 754
+PE E++ PAVTGT+N LK
Sbjct: 305 NPEEEVIAPAVTGTLNVLK 361
Score = 82.6 bits (174), Expect(2) = 3e-023
Identities = 45/78 (57%), Positives = 49/78 (62%)
Frame = +2 / -2
Query: 758 SAFMVPVTAGPSISRSGSVIFPEGTGVAT*KTPWHPATAPAIAS*SRTSALKSLRFSEAF 937
+ F VPVTAG S SG V PEGTG+AT KTP PATA A+ S*S SAL S S A
Sbjct: 357 NTFSVPVTAGAITSSSGLVDLPEGTGLATWKTPSQPATADAMLS*SSRSALSSCSLSPAP 178
Query: 938 SNRFR*AVLLSLRSRTVP 991
S+ R*A L SRTVP
Sbjct: 177 SSALR*AFLALPGSRTVP 124
Score = 71.2 bits (149), Expect(2) = 8e-045
Identities = 24/53 (45%), Positives = 37/53 (69%)
Frame = -2 / +3
Query: 681 DWPKDKIKDENCWSDKEFCRNEENWYSVAKISSEEAALEYAKQTGLDVVTVNP 523
+WPK K+ E+ WSDK+ C+ E+WY ++K ++ A YA +TG+DVVT+ P
Sbjct: 432 NWPKAKVFTEDSWSDKDLCKKGEDWYLLSKTRAKREAFAYAAKTGMDVVTILP 590
Score = 46.4 bits (95), Expect(2) = 3e-023
Identities = 25/52 (48%), Positives = 31/52 (59%)
Frame = +2 / -1
Query: 524 GLTVTTSSPVCFAYSSAASSDEILATEYQFSSFLQNSLSDQQFSSLILSLGQ 679
G VTTS PV A + A+ +L ++YQ S FL SLSDQ S L+LGQ
Sbjct: 589 GRIVTTSIPVFAA*AKASRFARVLESKYQSSPFLHRSLSDQLSSVNTLALGQ 434
>gb|BI960557.1|BI960557 HVSMEn0025A09f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0025A09f,
mRNA sequence
Length = 669
Score = 132 bits (283), Expect(3) = 8e-044
Identities = 56/89 (62%), Positives = 64/89 (71%)
Frame = -2 / +2
Query: 1095 EEAAGSAETACVTXAXXXIASWLVKLLLSRGYTVHGTVRDLSDNKTAHLKRLENASENLK 916
+E G +T CVT A IASWLVKLLL RGYTV GTVR+ D K AHLK L+ A+E L
Sbjct: 122 QELPGHGQTVCVTGAAGYIASWLVKLLLERGYTVKGTVRNPDDPKNAHLKALDGAAERLV 301
Query: 915 LFKADVLDYDAMAGAVAGCQGVFHVATPV 829
L KAD+LDYDA+ AV GC GVFH A+PV
Sbjct: 302 LCKADLLDYDAICAAVEGCHGVFHTASPV 388
Score = 86.3 bits (182), Expect(2) = 4e-021
Identities = 46/88 (52%), Positives = 52/88 (59%)
Frame = +2 / -1
Query: 830 TGVAT*KTPWHPATAPAIAS*SRTSALKSLRFSEAFSNRFR*AVLLSLRSRTVPWTV*PR 1009
TG A TPW P+TA +AS*SR SAL+ S A S+ FR A S TVP TV*P
Sbjct: 387 TGEAVWNTPWQPSTAAQMAS*SRRSALQRTSLSAAPSSAFRCAFFGSSGFLTVPLTV*PL 208
Query: 1010 ERRSLTSHEAMXXXAXVTHAVSALPAAS 1093
R SLTSH+AM A VTH V P +S
Sbjct: 207 SRSSLTSHDAMYPAAPVTHTVCPCPGSS 124
Score = 61.1 bits (127), Expect(3) = 8e-044
Identities = 21/45 (46%), Positives = 31/45 (68%)
Frame = -2 / +2
Query: 669 DKIKDENCWSDKEFCRNEENWYSVAKISSEEAALEYAKQTGLDVV 535
D + DE+CWSD EFC+ +NWY K +++AA + AK G+D+V
Sbjct: 533 DVVVDESCWSDLEFCKKTKNWYCYGKAVADQAAWDKAKAPGVDLV 667
Score = 38.2 bits (77), Expect(2) = 4e-021
Identities = 23/45 (51%), Positives = 25/45 (55%)
Frame = +2 / -1
Query: 536 TTSSPVCFAYSSAASSDEILATEYQFSSFLQNSLSDQQFSSLILS 670
T S+P A S AA S L +YQF FLQNS S QQ SS S
Sbjct: 666 TKSTPGALALSHAA*SATALP*QYQFLVFLQNSRSLQQDSSTTTS 532
Score = 22.6 bits (43), Expect(3) = 8e-044
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -2 / +2
Query: 816 ITDPEREMLGPAVTGT 769
+TD +M+ PAV GT
Sbjct: 386 VTDDPEQMVEPAVRGT 433
>gb|BG344152.2|BG344152 HVSMEg0007N17f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0007N17f, mRNA sequence
Length = 796
Score = 132 bits (283), Expect(3) = 1e-043
Identities = 56/89 (62%), Positives = 64/89 (71%)
Frame = -2 / +3
Query: 1095 EEAAGSAETACVTXAXXXIASWLVKLLLSRGYTVHGTVRDLSDNKTAHLKRLENASENLK 916
+E G +T CVT A IASWLVKLLL RGYTV GTVR+ D K AHLK L+ A+E L
Sbjct: 120 QELPGHGQTVCVTGAAGYIASWLVKLLLERGYTVKGTVRNPDDPKNAHLKALDGAAERLV 299
Query: 915 LFKADVLDYDAMAGAVAGCQGVFHVATPV 829
L KAD+LDYDA+ AV GC GVFH A+PV
Sbjct: 300 LCKADLLDYDAICAAVEGCHGVFHTASPV 386
Score = 86.3 bits (182), Expect(3) = 7e-025
Identities = 46/88 (52%), Positives = 52/88 (59%)
Frame = +2 / -1
Query: 830 TGVAT*KTPWHPATAPAIAS*SRTSALKSLRFSEAFSNRFR*AVLLSLRSRTVPWTV*PR 1009
TG A TPW P+TA +AS*SR SAL+ S A S+ FR A S TVP TV*P
Sbjct: 385 TGEAVWNTPWQPSTAAQMAS*SRRSALQRTSLSAAPSSAFRCAFFGSSGFLTVPLTV*PL 206
Query: 1010 ERRSLTSHEAMXXXAXVTHAVSALPAAS 1093
R SLTSH+AM A VTH V P +S
Sbjct: 205 SRSSLTSHDAMYPAAPVTHTVCPCPGSS 122
Score = 60.6 bits (126), Expect(3) = 1e-043
Identities = 21/44 (47%), Positives = 30/44 (68%)
Frame = -2 / +3
Query: 669 DKIKDENCWSDKEFCRNEENWYSVAKISSEEAALEYAKQTGLDV 538
D + DE+CWSD EFC+ +NWY K +E+AA E A+ G+D+
Sbjct: 531 DVVVDESCWSDLEFCKKTKNWYCYGKAVAEQAAWEKARARGVDL 662
Score = 39.6 bits (80), Expect(3) = 7e-025
Identities = 22/43 (51%), Positives = 25/43 (58%)
Frame = +2 / -1
Query: 542 SSPVCFAYSSAASSDEILATEYQFSSFLQNSLSDQQFSSLILS 670
S+P A+S AA S L +YQF FLQNS S QQ SS S
Sbjct: 658 STPRALAFSHAACSATALP*QYQFLVFLQNSRSLQQDSSTTTS 530
Score = 31.3 bits (62), Expect(3) = 7e-025
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +2 / -1
Query: 377 SRRASAVSLTSTMCQSLSLIRSGPPFR 457
SRR + + +T C ++RSGPP+R
Sbjct: 790 SRRPTTLPRVATSCDPSKILRSGPPWR 710
Score = 22.6 bits (43), Expect(3) = 1e-043
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -2 / +3
Query: 816 ITDPEREMLGPAVTGT 769
+TD +M+ PAV GT
Sbjct: 384 VTDDPEQMVEPAVRGT 431
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 570,057,148
Number of Sequences: 312970
Number of extensions: 9759744
Number of successful extensions: 88462
Number of sequences better than 1.0e-020: 220
length of database: 58,378,179
effective HSP length: 53
effective length of database: 41,790,769
effective search space used: 14459606074
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)