TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 4679577.2.1
(833 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BE559148.1|BE559148 HV_CEb0023K15f Hordeum vulgare seedl... 284 2e-081
gb|BF260800.3|BF260800 HVSMEf0022P16f Hordeum vulgare seedl... 220 4e-068
gb|BJ458220.1|BJ458220 BJ458220 K. Sato unpublished cDNA li... 190 4e-061
gb|CA031549.1|CA031549 HX10F18r HX Hordeum vulgare subsp. v... 219 4e-058
gb|AV931601.1|AV931601 AV931601 K. Sato unpublished cDNA li... 165 1e-053
gb|BF263615.1|BF263615 HV_CEa0007D10f Hordeum vulgare seedl... 124 4e-049
gb|BJ458244.1|BJ458244 BJ458244 K. Sato unpublished cDNA li... 149 7e-049
gb|BE216036.2|BE216036 HV_CEb0009D03f Hordeum vulgare seedl... 124 2e-046
gb|U02287.1|HVU02287 Hordeum vulgare cultivar NK1558 chitin... 102 3e-046
gb|BG365536.1|BG365536 HVSMEi0003B22f Hordeum vulgare 20 DA... 105 2e-045
gb|BE559172.3|BE559172 HV_CEb0023M17f Hordeum vulgare seedl... 182 2e-045
gb|BF631681.2|BF631681 HVSMEb0016O17f Hordeum vulgare seedl... 171 9e-044
gb|BQ755807.1|BQ755807 EBed07_SQ003_N15_R endosperm, 28 DPA... 105 4e-043
gb|BQ768685.1|BQ768685 EBro08_SQ012_K12_R root, 3 week, dro... 167 2e-042
gb|BQ768408.1|BQ768408 EBro08_SQ011_K13_R root, 3 week, dro... 131 2e-042
gb|BE454366.3|BE454366 HVSMEh0093N17f Hordeum vulgare 5-45 ... 102 2e-040
gb|BG365634.2|BG365634 HVSMEi0003I02f Hordeum vulgare 20 DA... 105 3e-040
gb|BF064981.3|BF064981 HV_CEb0022E17f Hordeum vulgare seedl... 100 3e-038
gb|BG414551.2|BG414551 HVSMEk0002N14f Hordeum vulgare testa... 105 3e-038
gb|BG366386.2|BG366386 HVSMEi0006N24f Hordeum vulgare 20 DA... 105 3e-038
gb|BG416746.1|BG416746 HVSMEk0014F08f Hordeum vulgare testa... 105 3e-038
gb|CA014196.1|CA014196 HT10K16r HT Hordeum vulgare subsp. v... 105 3e-038
gb|BM441867.2|BM441867 EBed07_SQ001_M10_R endosperm, 28 DPA... 105 3e-038
gb|BM371924.2|BM371924 EBma08_SQ004_G15_R maternal, 28 DPA,... 105 3e-038
gb|BG369588.2|BG369588 HVSMEi0025B12f Hordeum vulgare 20 DA... 105 4e-038
gb|BF626132.3|BF626132 HVSMEa0015P16f Hordeum vulgare seedl... 152 5e-038
emb|X78671.1|HVCHT2A H.vulgare mRNA for chitinase 2a 79 7e-038
gb|BI780179.2|BI780179 EBma08_SQ001_K01_R maternal, 28 DPA,... 103 1e-037
gb|AV926700.1|AV926700 AV926700 K. Sato unpublished cDNA li... 150 1e-037
gb|BE455238.3|BE455238 HVSMEh0096L08f Hordeum vulgare 5-45 ... 102 2e-037
emb|X78672.1|HVCHT2B H.vulgare mRNA for chitinase 2b 79 2e-037
gb|CB876675.1|CB876675 HP02A05T HP Hordeum vulgare subsp. v... 104 2e-037
gb|BG368852.1|BG368852 HVSMEi0020P03f Hordeum vulgare 20 DA... 102 2e-037
gb|CA022080.1|CA022080 HZ42B20r HZ Hordeum vulgare subsp. v... 100 6e-037
gb|CA013166.1|CA013166 HT07J12r HT Hordeum vulgare subsp. v... 102 2e-036
gb|BG365326.1|BG365326 HVSMEi0002E22f Hordeum vulgare 20 DA... 100 2e-036
gb|BG415203.1|BG415203 HVSMEk0005I16f Hordeum vulgare testa... 105 7e-036
gb|BE602137.3|BE602137 HVSMEh0102K15f Hordeum vulgare 5-45 ... 97 7e-036
gb|BF265478.2|BF265478 HV_CEa0012G06f Hordeum vulgare seedl... 114 1e-035
gb|BG365857.2|BG365857 HVSMEi0004I09f Hordeum vulgare 20 DA... 102 1e-035
gb|BI949464.1|BI949464 HVSMEl0014A17f Hordeum vulgare spike... 102 1e-035
emb|AJ276226.1|HVU276226 Hordeum vulgare mRNA for chitinase... 72 2e-035
gb|BJ546657.1|BJ546657 BJ546657 K. Sato unpublished cDNA li... 72 2e-035
gb|BF264498.2|BF264498 HV_CEa0009J09f Hordeum vulgare seedl... 73 3e-035
gb|BE519687.3|BE519687 HV_CEb0018G12f Hordeum vulgare seedl... 148 5e-035
gb|BJ544954.1|BJ544954 BJ544954 K. Sato unpublished cDNA li... 79 5e-035
gb|BI946904.1|BI946904 HVSMEl0002L21f Hordeum vulgare spike... 104 9e-035
gb|BF064990.1|BF064990 HV_CEb0022F13f Hordeum vulgare seedl... 79 1e-034
gb|AL499683.1|AL499683 AL499683 Hordeum vulgare Barke etiol... 84 2e-034
gb|BE195290.2|BE195290 HVSMEh0088N04f Hordeum vulgare 5-45 ... 92 3e-034
gb|BG368854.1|BG368854 HVSMEi0020P07f Hordeum vulgare 20 DA... 99 6e-034
gb|CB876220.1|CB876220 HX10K07w HX Hordeum vulgare subsp. v... 98 8e-034
gb|BG365887.1|BG365887 HVSMEi0004K07f Hordeum vulgare 20 DA... 96 1e-033
gb|BF065825.3|BF065825 HV_CEb0014B14f Hordeum vulgare seedl... 79 7e-033
gb|BF065067.1|BF065067 HV_CEb0022N01f Hordeum vulgare seedl... 72 7e-033
gb|BG366294.2|BG366294 HVSMEi0006J18f Hordeum vulgare 20 DA... 82 7e-033
gb|CA012210.1|CA012210 HT04M11r HT Hordeum vulgare subsp. v... 102 7e-033
gb|BI780034.2|BI780034 EBma08_SQ001_D14_R maternal, 28 DPA,... 105 7e-033
gb|BQ465942.1|BQ465942 HT01C02T HT Hordeum vulgare subsp. v... 105 7e-033
gb|BG414755.1|BG414755 HVSMEk0003J19f Hordeum vulgare testa... 105 7e-033
gb|BQ466541.1|BQ466541 HT02N08r HT Hordeum vulgare subsp. v... 105 7e-033
gb|BJ544774.1|BJ544774 BJ544774 K. Sato unpublished cDNA li... 72 2e-032
gb|BI949025.1|BI949025 HVSMEl0012B07f Hordeum vulgare spike... 103 5e-032
gb|BJ545180.1|BJ545180 BJ545180 K. Sato unpublished cDNA li... 79 8e-032
gb|BQ466147.1|BQ466147 HT01L11T HT Hordeum vulgare subsp. v... 102 1e-031
gb|CA013604.1|CA013604 HT08P16r HT Hordeum vulgare subsp. v... 102 1e-031
gb|BQ465191.1|BQ465191 HU02O12r HU Hordeum vulgare subsp. v... 102 1e-031
emb|X15349.1|HVENDCHT Barley (H.vulgare) mRNA for endochiti... 102 1e-031
gb|CA014966.1|CA014966 HT12N24r HT Hordeum vulgare subsp. v... 84 1e-031
gb|BM371530.2|BM371530 EBma08_SQ003_B11_R maternal, 28 DPA,... 83 2e-031
gb|AV926193.1|AV926193 AV926193 K. Sato unpublished cDNA li... 100 2e-031
gb|AV926184.1|AV926184 AV926184 K. Sato unpublished cDNA li... 100 2e-031
gb|BE454492.3|BE454492 HVSMEh0094A02f Hordeum vulgare 5-45 ... 105 2e-031
gb|BG365987.1|BG365987 HVSMEi0005K09f Hordeum vulgare 20 DA... 89 2e-031
gb|BE454845.1|BE454845 HVSMEh0095E05f Hordeum vulgare 5-45 ... 100 4e-031
gb|BG417971.1|BG417971 HVSMEk0020F20f Hordeum vulgare testa... 100 4e-031
gb|BE214536.1|BE214536 HV_CEb0003L19f Hordeum vulgare seedl... 134 5e-031
gb|BJ546437.1|BJ546437 BJ546437 K. Sato unpublished cDNA li... 72 7e-031
gb|BE214577.2|BE214577 HV_CEb0003N19f Hordeum vulgare seedl... 79 7e-031
gb|BJ447651.1|BJ447651 BJ447651 K. Sato unpublished cDNA li... 126 8e-031
gb|BJ455403.1|BJ455403 BJ455403 K. Sato unpublished cDNA li... 126 8e-031
gb|BE602548.3|BE602548 HVSMEh0099N16f Hordeum vulgare 5-45 ... 107 1e-030
gb|BG368439.1|BG368439 HVSMEi0018M10f Hordeum vulgare 20 DA... 80 1e-030
gb|BI955596.1|BI955596 HVSMEm0023L14f Hordeum vulgare green... 73 2e-030
gb|BG417744.1|BG417744 HVSMEk0019F09f Hordeum vulgare testa... 101 2e-030
gb|BF259800.2|BF259800 HVSMEf0020E19f Hordeum vulgare seedl... 105 3e-030
gb|BE216122.2|BE216122 HV_CEb0009I06f Hordeum vulgare seedl... 82 4e-030
gb|AL500402.1|AL500402 AL500402 Hordeum vulgare Barke etiol... 82 5e-030
gb|BI780166.2|BI780166 EBma08_SQ001_J11_R maternal, 28 DPA,... 79 5e-030
gb|CB878161.1|CB878161 HP07J01T HP Hordeum vulgare subsp. v... 79 5e-030
gb|BE216024.1|BE216024 HV_CEb0009C12f Hordeum vulgare seedl... 79 5e-030
gb|BI951414.1|BI951414 HVSMEl0025N19f Hordeum vulgare spike... 79 5e-030
gb|BJ544278.1|BJ544278 BJ544278 K. Sato unpublished cDNA li... 79 5e-030
gb|BJ544690.1|BJ544690 BJ544690 K. Sato unpublished cDNA li... 79 5e-030
gb|CB879149.1|CB879149 HP11B19T HP Hordeum vulgare subsp. v... 82 1e-029
gb|BF065694.2|BF065694 HV_CEb0013H08f Hordeum vulgare seedl... 79 1e-029
gb|BG301220.2|BG301220 HVSMEb0019P18f Hordeum vulgare seedl... 103 1e-029
gb|BF066058.1|BF066058 HV_CEb0014L16f Hordeum vulgare seedl... 79 3e-029
gb|BI955638.1|BI955638 HVSMEm0023N21f Hordeum vulgare green... 79 3e-029
gb|BG365157.2|BG365157 HVSMEi0001I15f Hordeum vulgare 20 DA... 98 4e-029
gb|BI953201.1|BI953201 HVSMEm0011K01f Hordeum vulgare green... 79 5e-029
gb|CA018162.1|CA018162 HV07L16r HV Hordeum vulgare subsp. v... 102 5e-029
gb|BM096890.2|BM096890 EBma08_SQ001_O17_R maternal, 28 DPA,... 92 1e-028
gb|BE214283.1|BE214283 HV_CEb0003A01f Hordeum vulgare seedl... 72 1e-028
gb|BQ663496.1|BQ663496 HU02O12u HU Hordeum vulgare subsp. v... 91 2e-028
gb|CA016825.1|CA016825 HV05P04u HV Hordeum vulgare subsp. v... 91 2e-028
gb|CA012187.1|CA012187 HT04K16r HT Hordeum vulgare subsp. v... 105 2e-028
gb|BE215473.3|BE215473 HV_CEb0006O09f Hordeum vulgare seedl... 79 3e-028
gb|CA015187.1|CA015187 HT13I21r HT Hordeum vulgare subsp. v... 73 3e-028
gb|BQ758640.1|BQ758640 EBma07_SQ002_J07_R maternal, 21 DPA,... 73 4e-028
gb|BE602672.2|BE602672 HVSMEh0101A21f Hordeum vulgare 5-45 ... 73 5e-028
gb|AV931065.1|AV931065 AV931065 K. Sato unpublished cDNA li... 88 6e-028
gb|BM371442.2|BM371442 EBma08_SQ002_M02_R maternal, 28 DPA,... 89 8e-028
gb|BI952917.1|BI952917 HVSMEm0008F23f Hordeum vulgare green... 79 1e-027
gb|BG368640.2|BG368640 HVSMEi0020A24f Hordeum vulgare 20 DA... 73 2e-027
gb|CA017694.1|CA017694 HV05P04r HV Hordeum vulgare subsp. v... 97 2e-027
gb|BJ543978.1|BJ543978 BJ543978 K. Sato unpublished cDNA li... 72 3e-027
gb|BG369358.2|BG369358 HVSMEi0024B14f Hordeum vulgare 20 DA... 105 4e-027
gb|BG365564.2|BG365564 HVSMEi0003D14f Hordeum vulgare 20 DA... 73 4e-027
gb|BE216371.2|BE216371 HV_CEb0010F03f Hordeum vulgare seedl... 72 2e-026
gb|BE411224.1|BE411224 ISC003.D02F990524 ITEC ISC Barley Le... 100 2e-026
gb|BE213990.1|BE213990 HV_CEb0001N13f Hordeum vulgare seedl... 82 9e-026
gb|BF628657.2|BF628657 HVSMEb0006P01f Hordeum vulgare seedl... 69 2e-025
gb|BE602375.2|BE602375 HVSMEh0098L01f Hordeum vulgare 5-45 ... 71 2e-025
gb|BE559387.2|BE559387 HV_CEb0024H02f Hordeum vulgare seedl... 79 4e-025
gb|BG367616.2|BG367616 HVSMEi0012P08f Hordeum vulgare 20 DA... 74 4e-025
gb|BG368219.2|BG368219 HVSMEi0016L15f Hordeum vulgare 20 DA... 70 4e-025
gb|BG366444.1|BG366444 HVSMEi0007B06f Hordeum vulgare 20 DA... 73 4e-025
gb|BE193259.3|BE193259 HVSMEh0080F13f Hordeum vulgare 5-45 ... 71 8e-025
gb|BE559371.1|BE559371 HV_CEb0024F08f Hordeum vulgare seedl... 79 1e-024
gb|BI946596.1|BI946596 HVSMEl0001A13f Hordeum vulgare spike... 68 1e-024
gb|BE454981.1|BE454981 HVSMEh0095L21f Hordeum vulgare 5-45 ... 71 1e-024
gb|BE196066.3|BE196066 HVSMEh0091E09f Hordeum vulgare 5-45 ... 73 3e-024
gb|BQ758652.1|BQ758652 EBma07_SQ002_L09_R maternal, 21 DPA,... 73 3e-024
gb|BF265978.2|BF265978 HV_CEa0013N09f Hordeum vulgare seedl... 79 1e-023
gb|BG415850.1|BG415850 HVSMEk0008C15f Hordeum vulgare testa... 69 1e-023
gb|BJ544300.1|BJ544300 BJ544300 K. Sato unpublished cDNA li... 72 2e-023
gb|BF065377.2|BF065377 HV_CEb0012E08f Hordeum vulgare seedl... 79 2e-023
gb|BE195244.3|BE195244 HVSMEh0088K24f Hordeum vulgare 5-45 ... 109 3e-023
gb|BI948372.1|BI948372 HVSMEl0009E13f Hordeum vulgare spike... 77 5e-023
gb|BI950473.1|BI950473 HVSMEl0020N22f Hordeum vulgare spike... 79 5e-023
gb|BG366443.1|BG366443 HVSMEi0007B04f Hordeum vulgare 20 DA... 73 9e-023
gb|BG367460.1|BG367460 HVSMEi0012F13f Hordeum vulgare 20 DA... 63 2e-022
gb|CB879385.1|CB879385 HP02A05w HP Hordeum vulgare subsp. v... 75 2e-022
gb|BM371550.2|BM371550 EBma08_SQ003_C16_R maternal, 28 DPA,... 105 2e-022
gb|CA026694.1|CA026694 HZ56K16r HZ Hordeum vulgare subsp. v... 81 3e-022
gb|BG366514.1|BG366514 HVSMEi0007F02f Hordeum vulgare 20 DA... 73 6e-022
gb|BG369545.2|BG369545 HVSMEi0024N21f Hordeum vulgare 20 DA... 73 8e-022
gb|AV935813.1|AV935813 AV935813 K. Sato unpublished cDNA li... 66 3e-021
gb|BJ476805.1|BJ476805 BJ476805 K. Sato unpublished cDNA li... 66 3e-021
gb|BI947443.1|BI947443 HVSMEl0005H24f Hordeum vulgare spike... 77 5e-021
gb|BG369819.1|BG369819 HVSMEi0026C13f Hordeum vulgare 20 DA... 73 5e-021
gb|BF621706.2|BF621706 HVSMEa0011P10f Hordeum vulgare seedl... 79 1e-020
gb|BE558718.1|BE558718 HV_CEb0020C16f Hordeum vulgare seedl... 79 1e-020
>gb|BE559148.1|BE559148 HV_CEb0023K15f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0023K15f, mRNA sequence
Length = 551
Score = 284 bits (615), Expect(2) = 2e-081
Identities = 107/130 (82%), Positives = 118/130 (90%)
Frame = +2 / -3
Query: 287 DGPSKNYCDRNNTQWPCQAGKGYYGRGPLQISWNFNYGPAGQSIGFDGLGDPDAVARSAV 466
+GPSKNYCD NT+WPC AGKGYYGRGPLQ SWN+NYG AGQS+GFDGL DPDAVARS V
Sbjct: 489 NGPSKNYCDPTNTEWPCVAGKGYYGRGPLQFSWNYNYGAAGQSLGFDGLNDPDAVARSPV 310
Query: 467 LAFRSALWYWMNNVHGAIVSGQGFGATIRAINGALECDGKNPNSVNNRVAYYKQFCQDFG 646
LAF++ALWYWMN+VH IVSGQGFGATIRAINGALEC+GKNP +VN+RVAYYKQFCQ FG
Sbjct: 309 LAFQAALWYWMNSVHDVIVSGQGFGATIRAINGALECNGKNPTAVNDRVAYYKQFCQQFG 130
Query: 647 VDPGNNLTC* 676
VDPG +LTC*
Sbjct: 129 VDPGTSLTC* 100
Score = 232 bits (502), Expect(2) = 3e-064
Identities = 101/128 (78%), Positives = 103/128 (80%)
Frame = -3 / +2
Query: 672 QVRLLPGSTPKSWQNCL**ATRLLTELGFLPSHSSAPLMARMVAPKPWPETMAPCTLFIQ 493
QVRL+PGSTP WQNCL**ATR LT +GFLP HSSAPLMA MVAP PWPETM CTLFIQ
Sbjct: 104 QVRLVPGSTPNCWQNCL**ATRSLTAVGFLPLHSSAPLMALMVAPNPWPETMTSCTLFIQ 283
Query: 492 YQSAERNASTALRATASGSPSPSKPMLCPAGP*LKFQEICSGPRP*YPFPAWHGHCVLFR 313
YQSA NA T LRATASGS SPSKP LCPA P*L F E CSGPRP* PFPA HGH V
Sbjct: 284 YQSAAWNAKTGLRATASGSLSPSKPRLCPAAP*L*FHENCSGPRP**PFPATHGHSVFVG 463
Query: 312 SQ*FLLGP 289
SQ*FLLGP
Sbjct: 464 SQ*FLLGP 487
Score = 38.2 bits (77), Expect(2) = 2e-081
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = +2 / -2
Query: 227 AAFFGNANHETIKFCYINEI 286
AAFF + N TIKFCYI+EI
Sbjct: 550 AAFFAHVNQRTIKFCYIDEI 491
Score = 33.1 bits (66), Expect(2) = 3e-064
Identities = 15/20 (75%), Positives = 15/20 (75%)
Frame = -3 / +3
Query: 285 ISLM*QNFMVSWLALPKKAA 226
IS M*QNFMV WL KKAA
Sbjct: 492 ISSM*QNFMVLWLTWAKKAA 551
>gb|BF260800.3|BF260800 HVSMEf0022P16f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0022P16f, mRNA sequence
Length = 725
Score = 220 bits (474), Expect(4) = 4e-068
Identities = 85/162 (52%), Positives = 103/162 (63%)
Frame = +2 / +1
Query: 50 NNASVASIVTPXXXXXXXXXXXXSCEANGFYTRDAFLAAAGYYPAFGRTGTVDDSKREIA 229
+ SV +VT C FYTR +FLA A P FG+ T DD KREIA
Sbjct: 85 SGVSVEGVVTEAFFNGIKSRAGNGCAGKSFYTRPSFLAGARANPNFGKGRTTDDGKREIA 264
Query: 230 AFFGNANHETIKFCYINEIDGPSKNYCDRNNTQWPCQAGKGYYGRGPLQISWNFNYGPAG 409
AFF + HET CYI EI G +NYCDR TQWPC +GKGYYGRGPLQ++WN+NYG AG
Sbjct: 265 AFFAHVTHETGHMCYIEEIGGARQNYCDRKYTQWPCTSGKGYYGRGPLQLTWNYNYGAAG 444
Query: 410 QSIGFDGLGDPDAVARSAVLAFRSALWYWMNNVHGAIVSGQG 535
+S+GFDGL P+ VA +AF++ALW+WMNNV + G G
Sbjct: 445 KSVGFDGLNTPENVAHDPEVAFKAALWFWMNNVKHVLPRGFG 570
Score = 125 bits (267), Expect = 4e-028
Identities = 65/110 (59%), Positives = 68/110 (61%)
Frame = -3 / -1
Query: 534 PWPETMAPCTLFIQYQSAERNASTALRATASGSPSPSKPMLCPAGP*LKFQEICSGPRP* 355
P P TLFIQ QSA NA++ AT SG SPS P L PA P*L F CSGPRP*
Sbjct: 569 PNPRGRTCFTLFIQNQSAALNATSGSCATFSGVLSPSNPTLFPAAP*L*FHVSCSGPRP* 390
Query: 354 YPFPAWHGHCVLFRSQ*FLLGPSISLM*QNFMVSWLALPKKAAISRLESS 205
YPFP HGHCV F SQ*F L P IS M* VS + KKAAIS L SS
Sbjct: 389 YPFPEVHGHCVYFLSQ*FCLAPPISSM*HMCPVSCVTWAKKAAISLLPSS 240
Score = 46.0 bits (94), Expect(4) = 4e-068
Identities = 15/31 (48%), Positives = 22/31 (70%)
Frame = +2 / +2
Query: 587 NPNSVNNRVAYYKQFCQDFGVDPGNNLTC*M 679
N +N R YY+ +C+ FG +PGN+LTC*+
Sbjct: 614 NSXXMNARAGYYRAYCKQFGFNPGNSLTC*V 706
Score = 25.8 bits (50), Expect(4) = 4e-068
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +2 / +1
Query: 8 GAGCQSGPC 34
G GCQSGPC
Sbjct: 37 GDGCQSGPC 63
Score = 24.0 bits (46), Expect(4) = 4e-068
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +2 / +1
Query: 530 QGFGATIRAIN 562
+GFGAT RAIN
Sbjct: 559 RGFGATTRAIN 591
>gb|BJ458220.1|BJ458220 BJ458220 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak31c19 3', mRNA sequence
Length = 537
Score = 190 bits (410), Expect(3) = 4e-061
Identities = 69/112 (61%), Positives = 85/112 (75%)
Frame = +2 / -2
Query: 200 TVDDSKREIAAFFGNANHETIKFCYINEIDGPSKNYCDRNNTQWPCQAGKGYYGRGPLQI 379
T DD KREIAAFF + HET CYI EI G +NYCDR TQWPC +GKGYYGRGPLQ+
Sbjct: 530 TTDDGKREIAAFFAHVTHETGHMCYIEEIGGARQNYCDRKYTQWPCTSGKGYYGRGPLQL 351
Query: 380 SWNFNYGPAGQSIGFDGLGDPDAVARSAVLAFRSALWYWMNNVHGAIVSGQG 535
+WN+NYG AG+S+GFDGL +P+ VA+ +AF++ALW+WMNNV + G G
Sbjct: 350 TWNYNYGAAGKSVGFDGLNNPEKVAQDPEVAFKAALWFWMNNVKQVLPRGFG 195
Score = 125 bits (268), Expect(2) = 2e-032
Identities = 65/110 (59%), Positives = 68/110 (61%)
Frame = -3 / +1
Query: 534 PWPETMAPCTLFIQYQSAERNASTALRATASGSPSPSKPMLCPAGP*LKFQEICSGPRP* 355
P P TLFIQ QSA NA++ AT SG SPS P L PA P*L F CSGPRP*
Sbjct: 196 PNPRGRTCFTLFIQNQSAALNATSGSCATFSGLLSPSNPTLFPAAP*L*FHVSCSGPRP* 375
Query: 354 YPFPAWHGHCVLFRSQ*FLLGPSISLM*QNFMVSWLALPKKAAISRLESS 205
YPFP HGHCV F SQ*F L P IS M* VS + KKAAIS L SS
Sbjct: 376 YPFPEVHGHCVYFLSQ*FCLAPPISSM*HMCPVSCVTCAKKAAISLLPSS 525
Score = 59.3 bits (123), Expect(3) = 4e-061
Identities = 20/36 (55%), Positives = 28/36 (77%)
Frame = +2 / -2
Query: 572 ECDGKNPNSVNNRVAYYKQFCQDFGVDPGNNLTC*M 679
EC+G N ++N R YY+ +C+ FGVDPGN+LTC*+
Sbjct: 167 ECNGGNSAAMNARAGYYRAYCKQFGVDPGNSLTC*V 60
Score = 33.6 bits (67), Expect(2) = 2e-032
Identities = 21/53 (39%), Positives = 23/53 (43%)
Frame = -3 / +1
Query: 729 STNTCVSTGQQPNERENIQQVRLLPGSTPKSWQNCL**ATRLLTELGFLPSHS 571
ST CV ++ QVRL PGSTP Q ** R F P HS
Sbjct: 10 ST*PCVFMHVDLGRAQST*QVRLFPGSTPNCLQ*AR**PARAFMAAEFPPLHS 168
Score = 24.0 bits (46), Expect(3) = 4e-061
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +2 / -2
Query: 530 QGFGATIRAIN 562
+GFGAT RAIN
Sbjct: 206 RGFGATTRAIN 174
>gb|CA031549.1|CA031549 HX10F18r HX Hordeum vulgare subsp. vulgare cDNA clone HX10F18
5-PRIME, mRNA sequence
Length = 613
Score = 219 bits (473), Expect(2) = 4e-058
Identities = 83/153 (54%), Positives = 102/153 (66%)
Frame = +2 / +1
Query: 50 NNASVASIVTPXXXXXXXXXXXXSCEANGFYTRDAFLAAAGYYPAFGRTGTVDDSKREIA 229
+ SV +VT C FYTR +FLA A P FG+ T DD KREIA
Sbjct: 79 SGVSVEGVVTEAFFNGIKSRAGNGCAGKSFYTRPSFLAGARANPNFGKGRTTDDGKREIA 258
Query: 230 AFFGNANHETIKFCYINEIDGPSKNYCDRNNTQWPCQAGKGYYGRGPLQISWNFNYGPAG 409
AFF + HET CYI EI G +NYCDR TQWPC +GKGYYGRGPLQ++WN+NYG AG
Sbjct: 259 AFFAHVTHETGHMCYIEEIGGARQNYCDRKYTQWPCTSGKGYYGRGPLQLTWNYNYGAAG 438
Query: 410 QSIGFDGLGDPDAVARSAVLAFRSALWYWMNNV 508
+S+GFDGL +P+ VA+ +AF++ALW+WMNNV
Sbjct: 439 KSVGFDGLNNPEKVAQDPEVAFKAALWFWMNNV 537
Score = 124 bits (265), Expect = 7e-028
Identities = 63/101 (62%), Positives = 66/101 (65%)
Frame = -3 / -3
Query: 507 TLFIQYQSAERNASTALRATASGSPSPSKPMLCPAGP*LKFQEICSGPRP*YPFPAWHGH 328
TLFIQ QSA NA++ AT SG SPS P L PA P*L F CSGPRP*YPFP HGH
Sbjct: 536 TLFIQNQSAALNATSGSCATFSGLLSPSNPTLFPAAP*L*FHVSCSGPRP*YPFPEVHGH 357
Query: 327 CVLFRSQ*FLLGPSISLM*QNFMVSWLALPKKAAISRLESS 205
CV F SQ*F L P IS M* VS + KKAAIS L SS
Sbjct: 356 CVYFLSQ*FCLAPPISSM*HMCPVSCVTWAKKAAISLLPSS 234
Score = 25.8 bits (50), Expect(2) = 4e-058
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +2 / +1
Query: 8 GAGCQSGPC 34
G GCQSGPC
Sbjct: 31 GDGCQSGPC 57
>gb|AV931601.1|AV931601 AV931601 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd23h02 3', mRNA sequence
Length = 633
Score = 165 bits (354), Expect(3) = 1e-053
Identities = 58/98 (59%), Positives = 74/98 (75%)
Frame = +2 / -2
Query: 242 NANHETIKFCYINEIDGPSKNYCDRNNTQWPCQAGKGYYGRGPLQISWNFNYGPAGQSIG 421
+ HET CYI EI G +NYCDR TQWPC +GKGYYGRGPLQ++WN+NYG AG+S+G
Sbjct: 632 HVTHETGHMCYIEEIGGARQNYCDRKYTQWPCTSGKGYYGRGPLQLTWNYNYGAAGKSVG 453
Query: 422 FDGLGDPDAVARSAVLAFRSALWYWMNNVHGAIVSGQG 535
FDGL +P+ VA+ +AF++ALW+WMNNV + G G
Sbjct: 452 FDGLNNPEKVAQDPEVAFKAALWFWMNNVKQVLPRGFG 339
Score = 111 bits (236), Expect(2) = 4e-029
Identities = 56/94 (59%), Positives = 58/94 (61%)
Frame = -3 / +1
Query: 534 PWPETMAPCTLFIQYQSAERNASTALRATASGSPSPSKPMLCPAGP*LKFQEICSGPRP* 355
P P TLFIQ QSA NA++ AT SG SPS P L PA P*L F CSGPRP*
Sbjct: 340 PNPRGRTCFTLFIQNQSAALNATSGSCATFSGLLSPSNPTLFPAAP*L*FHVSCSGPRP* 519
Query: 354 YPFPAWHGHCVLFRSQ*FLLGPSISLM*QNFMVS 253
YPFP HGHCV F SQ*F L P IS M* VS
Sbjct: 520 YPFPEVHGHCVYFLSQ*FCLAPPISSM*HMCPVS 621
Score = 59.7 bits (124), Expect(3) = 1e-053
Identities = 21/36 (58%), Positives = 28/36 (77%)
Frame = +2 / -2
Query: 572 ECDGKNPNSVNNRVAYYKQFCQDFGVDPGNNLTC*M 679
EC+G N ++N R YY+ +CQ FGVDPGN+LTC*+
Sbjct: 311 ECNGGNSAAMNARGGYYRAYCQQFGVDPGNSLTC*V 204
Score = 37.3 bits (75), Expect(2) = 4e-029
Identities = 18/34 (52%), Positives = 18/34 (52%)
Frame = -3 / +1
Query: 672 QVRLLPGSTPKSWQNCL**ATRLLTELGFLPSHS 571
QVRL PGSTP WQ ** R F P HS
Sbjct: 211 QVRLFPGSTPNCWQ*AR**PPRAFMAAEFPPLHS 312
Score = 24.0 bits (46), Expect(3) = 1e-053
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +2 / -2
Query: 530 QGFGATIRAIN 562
+GFGAT RAIN
Sbjct: 350 RGFGATTRAIN 318
>gb|BF263615.1|BF263615 HV_CEa0007D10f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0007D10f, mRNA sequence
Length = 617
Score = 124 bits (266), Expect(3) = 4e-049
Identities = 41/75 (54%), Positives = 57/75 (76%)
Frame = +2 / +2
Query: 311 DRNNTQWPCQAGKGYYGRGPLQISWNFNYGPAGQSIGFDGLGDPDAVARSAVLAFRSALW 490
D N+ +WPC +GKGYYGRGPLQ++WN+NYG AG+ + F+GL +P+AVA+ L F++A W
Sbjct: 212 DSNHPEWPCTSGKGYYGRGPLQLTWNYNYGAAGEKLKFNGLDNPEAVAQDPALTFQAAFW 391
Query: 491 YWMNNVHGAIVSGQG 535
+WM NVH + G G
Sbjct: 392 FWMTNVHQVLPQGFG 436
Score = 91.3 bits (193), Expect(3) = 6e-027
Identities = 36/63 (57%), Positives = 43/63 (68%)
Frame = +2 / +2
Query: 491 YWMNNVHGAIVSGQGFGATIRAINGALECDGKNPNSVNNRVAYYKQFCQDFGVDPGNNLT 670
+W + V QGFGAT AING +ECDGK P+ VN R YY +C+ FGVDPGNNLT
Sbjct: 386 FWFWMTNVHQVLPQGFGATTSAINGYVECDGKKPDLVNARAGYYMDYCKQFGVDPGNNLT 565
Query: 671 C*M 679
C*+
Sbjct: 566 C*V 574
Score = 81.7 bits (172), Expect(3) = 4e-049
Identities = 34/60 (56%), Positives = 37/60 (61%)
Frame = +2 / +2
Query: 122 CEANGFYTRDAFLAAAGYYPAFGRTGTVDDSKREIAAFFGNANHETIKFCYINEIDGPSK 301
C FYTR +FL A P FG+ T DD KREIAAFF + ET CYI EIDGPSK
Sbjct: 11 CPGKSFYTRQSFLDGAQANPDFGKGSTSDDGKREIAAFFAHVTQETGHMCYIEEIDGPSK 190
Score = 45.1 bits (92), Expect(3) = 6e-027
Identities = 17/28 (60%), Positives = 20/28 (71%)
Frame = +3 / +3
Query: 372 CRSPGTSTTGPRGRASASTGWATPTRWR 455
C GT+TTG GR+S+STGW T RWR
Sbjct: 273 CS*RGTTTTGRPGRSSSSTGWTTRRRWR 356
Score = 27.2 bits (53), Expect(3) = 4e-049
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +1 / +1
Query: 628 VLPGFRRRPGQQPH 669
+L RRRPG+QPH
Sbjct: 523 LLQAVRRRPGEQPH 564
Score = 22.1 bits (42), Expect(3) = 6e-027
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = +1 / +1
Query: 268 LLHQRDRRAEQ 300
+LH+ DRRAEQ
Sbjct: 157 VLHRGDRRAEQ 189
>gb|BJ458244.1|BJ458244 BJ458244 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak31e07 3', mRNA sequence
Length = 536
Score = 149 bits (320), Expect(3) = 7e-049
Identities = 52/85 (61%), Positives = 67/85 (78%)
Frame = +2 / -1
Query: 281 EIDGPSKNYCDRNNTQWPCQAGKGYYGRGPLQISWNFNYGPAGQSIGFDGLGDPDAVARS 460
EI G +NYCDR TQWPC +GKGYYGRGPLQ++WN+NYG AG+S+GFDGL +P+ VA+
Sbjct: 533 EIGGARQNYCDRKYTQWPCTSGKGYYGRGPLQLTWNYNYGAAGKSVGFDGLNNPEKVAQD 354
Query: 461 AVLAFRSALWYWMNNVHGAIVSGQG 535
+AF++ALW+WMNNV + G G
Sbjct: 353 PEVAFKAALWFWMNNVKQVLPRGFG 279
Score = 105 bits (223), Expect(2) = 9e-026
Identities = 51/85 (60%), Positives = 53/85 (62%)
Frame = -3 / +1
Query: 534 PWPETMAPCTLFIQYQSAERNASTALRATASGSPSPSKPMLCPAGP*LKFQEICSGPRP* 355
P P TLFIQ QSA NA++ AT SG SPS P L PA P*L F CSGPRP*
Sbjct: 280 PNPRGRTCFTLFIQNQSAALNATSGSCATFSGLLSPSNPTLFPAAP*L*FHVSCSGPRP* 459
Query: 354 YPFPAWHGHCVLFRSQ*FLLGPSIS 280
YP P HGHCV F SQ*F L P IS
Sbjct: 460 YPXPEVHGHCVYFLSQ*FCLAPPIS 534
Score = 59.3 bits (123), Expect(3) = 7e-049
Identities = 20/36 (55%), Positives = 28/36 (77%)
Frame = +2 / -1
Query: 572 ECDGKNPNSVNNRVAYYKQFCQDFGVDPGNNLTC*M 679
EC+G N ++N R YY+ +C+ FGVDPGN+LTC*+
Sbjct: 251 ECNGGNSAAMNARAGYYRAYCKQFGVDPGNSLTC*V 144
Score = 31.8 bits (63), Expect(2) = 9e-026
Identities = 17/34 (50%), Positives = 17/34 (50%)
Frame = -3 / +1
Query: 672 QVRLLPGSTPKSWQNCL**ATRLLTELGFLPSHS 571
QVRL PGSTP Q ** R F P HS
Sbjct: 151 QVRLFPGSTPNCLQ*AR**PARAFMAAEFPPLHS 252
Score = 24.0 bits (46), Expect(3) = 7e-049
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +2 / -1
Query: 530 QGFGATIRAIN 562
+GFGAT RAIN
Sbjct: 290 RGFGATTRAIN 258
>gb|BE216036.2|BE216036 HV_CEb0009D03f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0009D03f, mRNA sequence
Length = 557
Score = 124 bits (266), Expect(2) = 2e-046
Identities = 41/75 (54%), Positives = 57/75 (76%)
Frame = +2 / +1
Query: 311 DRNNTQWPCQAGKGYYGRGPLQISWNFNYGPAGQSIGFDGLGDPDAVARSAVLAFRSALW 490
D N+ +WPC +GKGYYGRGPLQ++WN+NYG AG+ + F+GL +P+AVA+ L F++A W
Sbjct: 307 DSNHPEWPCTSGKGYYGRGPLQLTWNYNYGAAGEKLKFNGLDNPEAVAQDPALTFQAAFW 486
Query: 491 YWMNNVHGAIVSGQG 535
+WM NVH + G G
Sbjct: 487 FWMTNVHQVLPQGFG 531
Score = 81.7 bits (172), Expect(2) = 2e-046
Identities = 34/60 (56%), Positives = 37/60 (61%)
Frame = +2 / +1
Query: 122 CEANGFYTRDAFLAAAGYYPAFGRTGTVDDSKREIAAFFGNANHETIKFCYINEIDGPSK 301
C FYTR +FL A P FG+ T DD KREIAAFF + ET CYI EIDGPSK
Sbjct: 106 CPGKSFYTRQSFLDGAQANPDFGKGSTSDDGKREIAAFFAHVTQETGHMCYIEEIDGPSK 285
>gb|U02287.1|HVU02287 Hordeum vulgare cultivar NK1558 chitinase gene, complete cds
Length = 1684
Score = 102 bits (217), Expect(3) = 3e-046
Identities = 34/60 (56%), Positives = 47/60 (78%)
Frame = +2 / +3
Query: 320 NTQWPCQAGKGYYGRGPLQISWNFNYGPAGQSIGFDGLGDPDAVARSAVLAFRSALWYWM 499
+ QWPC GK YYGRGP+Q+S N+NYGPAG++IG D L +PD VA ++F++A+W+WM
Sbjct: 1122 SAQWPCAPGKSYYGRGPIQLSHNYNYGPAGRAIGVDLLRNPDLVATDPTVSFKTAMWFWM 1301
Score = 67.5 bits (141), Expect(3) = 3e-046
Identities = 26/47 (55%), Positives = 32/47 (68%)
Frame = +2 / +3
Query: 119 SCEANGFYTRDAFLAAAGYYPAFGRTGTVDDSKREIAAFFGNANHET 259
+C+A GFYT DAF+AAA + FG TG D KRE+AAF +HET
Sbjct: 888 ACQAKGFYTYDAFVAAASAFRGFGTTGGTDTRKREVAAFLAQTSHET 1028
Score = 54.2 bits (112), Expect(3) = 3e-046
Identities = 19/47 (40%), Positives = 27/47 (57%)
Frame = +2 / +3
Query: 533 GFGATIRAINGALECDGKNPNSVNNRVAYYKQFCQDFGVDPGNNLTC 673
GFG +NG +EC + V +R+ +YK++C GV GNNL C
Sbjct: 1392 GFGVITNIVNGGIECGHGQDSRVADRIGFYKRYCDILGVGYGNNLDC 1532
>gb|BG365536.1|BG365536 HVSMEi0003B22f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0003B22f, mRNA sequence
Length = 805
Score = 105 bits (225), Expect(3) = 2e-045
Identities = 36/60 (60%), Positives = 48/60 (80%)
Frame = +2 / +3
Query: 320 NTQWPCQAGKGYYGRGPLQISWNFNYGPAGQSIGFDGLGDPDAVARSAVLAFRSALWYWM 499
+ QWPC GK YYGRGP+Q+S N+NYGPAG++IG D L +PD VA A +AF++A+W+WM
Sbjct: 336 SAQWPCAPGKRYYGRGPIQLSHNYNYGPAGRAIGVDLLANPDLVATDATVAFKTAIWFWM 515
Score = 73.0 bits (153), Expect(3) = 2e-045
Identities = 27/47 (57%), Positives = 34/47 (72%)
Frame = +2 / +3
Query: 119 SCEANGFYTRDAFLAAAGYYPAFGRTGTVDDSKREIAAFFGNANHET 259
+C+A GFYT DAF+AAA +P FG TG+ D KRE+AAF +HET
Sbjct: 102 ACQAKGFYTYDAFVAAASAFPGFGSTGSADAQKREVAAFLAQTSHET 242
Score = 42.3 bits (86), Expect(3) = 2e-045
Identities = 18/47 (38%), Positives = 24/47 (51%)
Frame = +2 / +3
Query: 533 GFGATIRAINGALECDGKNPNSVNNRVAYYKQFCQDFGVDPGNNLTC 673
GFG ING +EC + V +R+ YK+ GV G+NL C
Sbjct: 606 GFGVITNIINGGIECGHGQDSRVADRIGLYKRC*DMLGVGYGDNLDC 746
>gb|BE559172.3|BE559172 HV_CEb0023M17f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0023M17f, mRNA sequence
Length = 532
Score = 182 bits (392), Expect = 2e-045
Identities = 72/107 (67%), Positives = 79/107 (73%)
Frame = +2 / +1
Query: 8 GAGCQSGPCDVPETNNASVASIVTPXXXXXXXXXXXXSCEANGFYTRDAFLAAAGYYPAF 187
G GC+SGPC VP TNN SV +IVTP C A GFYTRDAFL A G YPAF
Sbjct: 211 GTGCRSGPCTVPVTNNVSVPAIVTPAFFGALVSQAADDCAAKGFYTRDAFLTALGGYPAF 390
Query: 188 GRTGTVDDSKREIAAFFGNANHETIKFCYINEIDGPSKNYCDRNNTQ 328
GRTG+ DDSKREIAAFF + NHETIKFCYI+EI+GPSKNYCD NT+
Sbjct: 391 GRTGSDDDSKREIAAFFAHVNHETIKFCYIDEINGPSKNYCDPTNTE 531
>gb|BF631681.2|BF631681 HVSMEb0016O17f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0016O17f, mRNA sequence
Length = 843
Score = 171 bits (368), Expect(2) = 9e-044
Identities = 68/131 (51%), Positives = 80/131 (61%)
Frame = +2 / +2
Query: 50 NNASVASIVTPXXXXXXXXXXXXSCEANGFYTRDAFLAAAGYYPAFGRTGTVDDSKREIA 229
+ SV +VT C FYTR +FLA A P FG+ T DD KREIA
Sbjct: 233 SGVSVEGVVTEAFFNGIKSRAGNGCAGKSFYTRPSFLAGARANPNFGKGRTTDDGKREIA 412
Query: 230 AFFGNANHETIKFCYINEIDGPSKNYCDRNNTQWPCQAGKGYYGRGPLQISWNFNYGPAG 409
AFF + HET CYI EI G +NYCDR TQWPC +GKGYYGRGPLQ++WN+NY AG
Sbjct: 413 AFFAHVTHETGHMCYIEEIGGARQNYCDRKYTQWPCTSGKGYYGRGPLQLTWNYNYRAAG 592
Query: 410 QSIGFDGLGDP 442
+S F GL +P
Sbjct: 593 KSFRFYGLTNP 625
Score = 25.8 bits (50), Expect(2) = 9e-044
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +2 / +2
Query: 8 GAGCQSGPC 34
G GCQSGPC
Sbjct: 185 GDGCQSGPC 211
>gb|BQ755807.1|BQ755807 EBed07_SQ003_N15_R endosperm, 28 DPA, no treatment, cv Optic,
EBed07 Hordeum vulgare subsp. vulgare cDNA clone
EBed07_SQ003_N15 5', mRNA sequence
Length = 688
Score = 105 bits (225), Expect(3) = 4e-043
Identities = 36/60 (60%), Positives = 48/60 (80%)
Frame = +2 / +1
Query: 320 NTQWPCQAGKGYYGRGPLQISWNFNYGPAGQSIGFDGLGDPDAVARSAVLAFRSALWYWM 499
+ QWPC GK YYGRGP+Q+S N+NYGPAG++IG D L +PD VA A +AF++A+W+WM
Sbjct: 202 SAQWPCAPGKRYYGRGPIQLSHNYNYGPAGRAIGVDLLANPDLVATDATVAFKTAIWFWM 381
Score = 54.7 bits (113), Expect(3) = 4e-043
Identities = 20/47 (42%), Positives = 27/47 (57%)
Frame = +2 / +1
Query: 533 GFGATIRAINGALECDGKNPNSVNNRVAYYKQFCQDFGVDPGNNLTC 673
GFG ING +EC + V +R+ +YK++C GV GNNL C
Sbjct: 472 GFGVITNIINGGIECGRGQDSRVADRIGFYKRYCDILGVGYGNNLDC 612
Score = 52.8 bits (109), Expect(3) = 4e-043
Identities = 20/36 (55%), Positives = 25/36 (69%)
Frame = +2 / +1
Query: 152 AFLAAAGYYPAFGRTGTVDDSKREIAAFFGNANHET 259
AF+AAA +P FG TG+ D KRE+AAF +HET
Sbjct: 1 AFVAAAAAFPGFGTTGSADAQKREVAAFLAQTSHET 108
>gb|BQ768685.1|BQ768685 EBro08_SQ012_K12_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ012_K12 5', mRNA sequence
Length = 592
Score = 167 bits (359), Expect(2) = 2e-042
Identities = 65/122 (53%), Positives = 76/122 (62%)
Frame = +2 / +3
Query: 50 NNASVASIVTPXXXXXXXXXXXXSCEANGFYTRDAFLAAAGYYPAFGRTGTVDDSKREIA 229
+ SV +VT C FYTR +FLA A P FG+ T DD KREIA
Sbjct: 225 SGVSVEGVVTEAFFNGIKSRAGNGCAGKSFYTRPSFLAGARANPNFGKGRTTDDGKREIA 404
Query: 230 AFFGNANHETIKFCYINEIDGPSKNYCDRNNTQWPCQAGKGYYGRGPLQISWNFNYGPAG 409
AFF + HET CYI EI G +NYCDR TQWPC +GKGYYGRGPLQ++WN+NYG AG
Sbjct: 405 AFFAHVTHETGHMCYIEEIGGARQNYCDRKYTQWPCTSGKGYYGRGPLQLTWNYNYGAAG 584
Query: 410 QS 415
+S
Sbjct: 585 KS 590
Score = 25.8 bits (50), Expect(2) = 2e-042
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +2 / +3
Query: 8 GAGCQSGPC 34
G GCQSGPC
Sbjct: 177 GDGCQSGPC 203
>gb|BQ768408.1|BQ768408 EBro08_SQ011_K13_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ011_K13 5', mRNA sequence
Length = 403
Score = 131 bits (280), Expect(3) = 2e-042
Identities = 44/75 (58%), Positives = 61/75 (81%)
Frame = +2 / +2
Query: 311 DRNNTQWPCQAGKGYYGRGPLQISWNFNYGPAGQSIGFDGLGDPDAVARSAVLAFRSALW 490
DR++ +WPC +GKGYYGRGPLQ++WN+NYG AG+S+GFDGL +P+ VA+ +AF++ALW
Sbjct: 5 DRSHPEWPCTSGKGYYGRGPLQLTWNYNYGAAGKSVGFDGLNNPEKVAQDPEVAFKAALW 184
Query: 491 YWMNNVHGAIVSGQG 535
+WMNNV + G G
Sbjct: 185 FWMNNVKQVLPRGFG 229
Score = 55.6 bits (115), Expect(3) = 2e-042
Identities = 19/36 (52%), Positives = 27/36 (75%)
Frame = +2 / +2
Query: 572 ECDGKNPNSVNNRVAYYKQFCQDFGVDPGNNLTC*M 679
EC+G N ++N R YY+ +C+ FGVDPG+ LTC*+
Sbjct: 257 ECNGGNSAAMNARARYYRAYCKKFGVDPGHRLTC*V 364
Score = 24.0 bits (46), Expect(3) = 2e-042
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +2 / +2
Query: 530 QGFGATIRAIN 562
+GFGAT RAIN
Sbjct: 218 RGFGATTRAIN 250
>gb|BE454366.3|BE454366 HVSMEh0093N17f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0093N17f, mRNA sequence
Length = 968
Score = 102 bits (218), Expect(3) = 2e-040
Identities = 36/60 (60%), Positives = 47/60 (78%)
Frame = +2 / +3
Query: 320 NTQWPCQAGKGYYGRGPLQISWNFNYGPAGQSIGFDGLGDPDAVARSAVLAFRSALWYWM 499
+ QWPC GK YYGRGP+Q+S N NYGPAG++IG D L +PD VA A +AF++A+W+WM
Sbjct: 438 SAQWPCAPGKRYYGRGPIQLSHN*NYGPAGRAIGVDLLANPDLVATDATVAFKTAIWFWM 617
Score = 73.0 bits (153), Expect(3) = 2e-040
Identities = 27/47 (57%), Positives = 34/47 (72%)
Frame = +2 / +3
Query: 119 SCEANGFYTRDAFLAAAGYYPAFGRTGTVDDSKREIAAFFGNANHET 259
+C+A GFYT DAF+AAA +P FG TG+ D KRE+AAF +HET
Sbjct: 195 ACQAKGFYTYDAFVAAASAFPGFGSTGSADAQKREVAAFLAQTSHET 335
Score = 28.6 bits (56), Expect(3) = 2e-040
Identities = 11/39 (28%), Positives = 18/39 (46%)
Frame = +2 / +1
Query: 533 GFGATIRAINGALECDGKNPNSVNNRVAYYKQFCQDFGV 649
GFG ING ++C + N + +YK+ G+
Sbjct: 709 GFGVITHIINGGIQCGHRPRNRFXHPNGFYKRLWDFLGL 825
>gb|BG365634.2|BG365634 HVSMEi0003I02f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0003I02f, mRNA sequence
Length = 741
Score = 105 bits (225), Expect(3) = 3e-040
Identities = 36/60 (60%), Positives = 48/60 (80%)
Frame = +2 / +3
Query: 320 NTQWPCQAGKGYYGRGPLQISWNFNYGPAGQSIGFDGLGDPDAVARSAVLAFRSALWYWM 499
+ QWPC GK YYGRGP+Q+S N+NYGPAG++IG D L +PD VA A +AF++A+W+WM
Sbjct: 420 SAQWPCAPGKRYYGRGPIQLSHNYNYGPAGRAIGVDLLANPDLVATDATVAFKTAIWFWM 599
Score = 73.0 bits (153), Expect(3) = 3e-040
Identities = 27/47 (57%), Positives = 34/47 (72%)
Frame = +2 / +3
Query: 119 SCEANGFYTRDAFLAAAGYYPAFGRTGTVDDSKREIAAFFGNANHET 259
+C+A GFYT DAF+AAA +P FG TG+ D KRE+AAF +HET
Sbjct: 186 ACQAKGFYTYDAFVAAASAFPGFGSTGSADAQKREVAAFLAQTSHET 326
Score = 24.4 bits (47), Expect(3) = 3e-040
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = +2 / +3
Query: 533 GFGATIRAINGALEC 577
GFG ING +EC
Sbjct: 690 GFGVITNIINGGIEC 734
>gb|BF064981.3|BF064981 HV_CEb0022E17f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0022E17f, mRNA sequence
Length = 815
Score = 100 bits (212), Expect(2) = 3e-038
Identities = 33/60 (55%), Positives = 46/60 (76%)
Frame = +2 / +2
Query: 320 NTQWPCQAGKGYYGRGPLQISWNFNYGPAGQSIGFDGLGDPDAVARSAVLAFRSALWYWM 499
+ WPC GK YYGRGP+Q++ N+NYGPAG++IG D L +PD VA +AF++A+W+WM
Sbjct: 524 SADWPCAPGKQYYGRGPIQLTHNYNYGPAGRAIGVDLLNNPDLVASDPTVAFKTAIWFWM 703
Score = 79.0 bits (166), Expect(2) = 3e-038
Identities = 31/47 (65%), Positives = 36/47 (76%)
Frame = +2 / +2
Query: 119 SCEANGFYTRDAFLAAAGYYPAFGRTGTVDDSKREIAAFFGNANHET 259
+C A GFYT DAFLAAA +PAFG TG +D KRE+AAFFG +HET
Sbjct: 290 ACLARGFYTYDAFLAAASAFPAFGTTGDLDTRKREVAAFFGQTSHET 430
>gb|BG414551.2|BG414551 HVSMEk0002N14f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0002N14f, mRNA sequence
Length = 805
Score = 105 bits (225), Expect(2) = 3e-038
Identities = 36/60 (60%), Positives = 48/60 (80%)
Frame = +2 / +2
Query: 320 NTQWPCQAGKGYYGRGPLQISWNFNYGPAGQSIGFDGLGDPDAVARSAVLAFRSALWYWM 499
+ QWPC GK YYGRGP+Q+S N+NYGPAG++IG D L +PD VA A +AF++A+W+WM
Sbjct: 428 SAQWPCAPGKRYYGRGPIQLSHNYNYGPAGRAIGVDLLANPDLVATDATVAFKTAIWFWM 607
Score = 73.0 bits (153), Expect(2) = 3e-038
Identities = 27/47 (57%), Positives = 34/47 (72%)
Frame = +2 / +2
Query: 119 SCEANGFYTRDAFLAAAGYYPAFGRTGTVDDSKREIAAFFGNANHET 259
+C+A GFYT DAF+AAA +P FG TG+ D KRE+AAF +HET
Sbjct: 194 ACQAKGFYTYDAFVAAASAFPGFGSTGSADAQKREVAAFLAQTSHET 334
>gb|BG366386.2|BG366386 HVSMEi0006N24f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0006N24f, mRNA sequence
Length = 710
Score = 105 bits (225), Expect(2) = 3e-038
Identities = 36/60 (60%), Positives = 48/60 (80%)
Frame = +2 / +3
Query: 320 NTQWPCQAGKGYYGRGPLQISWNFNYGPAGQSIGFDGLGDPDAVARSAVLAFRSALWYWM 499
+ QWPC GK YYGRGP+Q+S N+NYGPAG++IG D L +PD VA A +AF++A+W+WM
Sbjct: 423 SAQWPCAPGKRYYGRGPIQLSHNYNYGPAGRAIGVDLLANPDLVATDATVAFKTAIWFWM 602
Score = 73.0 bits (153), Expect(2) = 3e-038
Identities = 27/47 (57%), Positives = 34/47 (72%)
Frame = +2 / +3
Query: 119 SCEANGFYTRDAFLAAAGYYPAFGRTGTVDDSKREIAAFFGNANHET 259
+C+A GFYT DAF+AAA +P FG TG+ D KRE+AAF +HET
Sbjct: 189 ACQAKGFYTYDAFVAAASAFPGFGSTGSADAQKREVAAFLAQTSHET 329
>gb|BG416746.1|BG416746 HVSMEk0014F08f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0014F08f, mRNA sequence
Length = 682
Score = 105 bits (225), Expect(2) = 3e-038
Identities = 36/60 (60%), Positives = 48/60 (80%)
Frame = +2 / +1
Query: 320 NTQWPCQAGKGYYGRGPLQISWNFNYGPAGQSIGFDGLGDPDAVARSAVLAFRSALWYWM 499
+ QWPC GK YYGRGP+Q+S N+NYGPAG++IG D L +PD VA A +AF++A+W+WM
Sbjct: 352 SAQWPCAPGKRYYGRGPIQLSHNYNYGPAGRAIGVDLLANPDLVATDATVAFKTAIWFWM 531
Score = 73.0 bits (153), Expect(2) = 3e-038
Identities = 27/47 (57%), Positives = 34/47 (72%)
Frame = +2 / +1
Query: 119 SCEANGFYTRDAFLAAAGYYPAFGRTGTVDDSKREIAAFFGNANHET 259
+C+A GFYT DAF+AAA +P FG TG+ D KRE+AAF +HET
Sbjct: 118 ACQAKGFYTYDAFVAAASAFPGFGSTGSADAQKREVAAFLAQTSHET 258
>gb|CA014196.1|CA014196 HT10K16r HT Hordeum vulgare subsp. vulgare cDNA clone HT10K16
5-PRIME, mRNA sequence
Length = 670
Score = 105 bits (225), Expect(2) = 3e-038
Identities = 36/60 (60%), Positives = 48/60 (80%)
Frame = +2 / +3
Query: 320 NTQWPCQAGKGYYGRGPLQISWNFNYGPAGQSIGFDGLGDPDAVARSAVLAFRSALWYWM 499
+ QWPC GK YYGRGP+Q+S N+NYGPAG++IG D L +PD VA A +AF++A+W+WM
Sbjct: 435 SAQWPCAPGKRYYGRGPIQLSHNYNYGPAGRAIGVDLLANPDLVATDATVAFKTAIWFWM 614
Score = 73.0 bits (153), Expect(2) = 3e-038
Identities = 27/47 (57%), Positives = 34/47 (72%)
Frame = +2 / +3
Query: 119 SCEANGFYTRDAFLAAAGYYPAFGRTGTVDDSKREIAAFFGNANHET 259
+C+A GFYT DAF+AAA +P FG TG+ D KRE+AAF +HET
Sbjct: 201 ACQAKGFYTYDAFVAAAAAFPGFGTTGSADAQKREVAAFLAQTSHET 341
>gb|BM441867.2|BM441867 EBed07_SQ001_M10_R endosperm, 28 DPA, no treatment, cv Optic,
EBed07 Hordeum vulgare subsp. vulgare cDNA clone
EBed07_SQ001_M10 5', mRNA sequence
Length = 646
Score = 105 bits (225), Expect(2) = 3e-038
Identities = 36/60 (60%), Positives = 48/60 (80%)
Frame = +2 / +3
Query: 320 NTQWPCQAGKGYYGRGPLQISWNFNYGPAGQSIGFDGLGDPDAVARSAVLAFRSALWYWM 499
+ QWPC GK YYGRGP+Q+S N+NYGPAG++IG D L +PD VA A +AF++A+W+WM
Sbjct: 408 SAQWPCAPGKRYYGRGPIQLSHNYNYGPAGRAIGVDLLANPDLVATDATVAFKTAIWFWM 587
Score = 73.0 bits (153), Expect(2) = 3e-038
Identities = 27/47 (57%), Positives = 34/47 (72%)
Frame = +2 / +3
Query: 119 SCEANGFYTRDAFLAAAGYYPAFGRTGTVDDSKREIAAFFGNANHET 259
+C+A GFYT DAF+AAA +P FG TG+ D KRE+AAF +HET
Sbjct: 174 ACQAKGFYTYDAFVAAAAAFPGFGTTGSADAQKREVAAFLAQTSHET 314
>gb|BM371924.2|BM371924 EBma08_SQ004_G15_R maternal, 28 DPA, no treatment, cv Optic, EBma08
Hordeum vulgare subsp. vulgare cDNA clone
EBma08_SQ004_G15 5', mRNA sequence
Length = 552
Score = 105 bits (225), Expect(2) = 3e-038
Identities = 36/60 (60%), Positives = 48/60 (80%)
Frame = +2 / +2
Query: 320 NTQWPCQAGKGYYGRGPLQISWNFNYGPAGQSIGFDGLGDPDAVARSAVLAFRSALWYWM 499
+ QWPC GK YYGRGP+Q+S N+NYGPAG++IG D L +PD VA A +AF++A+W+WM
Sbjct: 269 SAQWPCAPGKRYYGRGPIQLSHNYNYGPAGRAIGVDLLANPDLVATDATVAFKTAIWFWM 448
Score = 73.0 bits (153), Expect(2) = 3e-038
Identities = 27/47 (57%), Positives = 34/47 (72%)
Frame = +2 / +2
Query: 119 SCEANGFYTRDAFLAAAGYYPAFGRTGTVDDSKREIAAFFGNANHET 259
+C+A GFYT DAF+AAA +P FG TG+ D KRE+AAF +HET
Sbjct: 35 ACQAKGFYTYDAFVAAAAAFPGFGTTGSADAQKREVAAFLAQTSHET 175
>gb|BG369588.2|BG369588 HVSMEi0025B12f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0025B12f, mRNA sequence
Length = 691
Score = 105 bits (225), Expect(2) = 4e-038
Identities = 36/60 (60%), Positives = 48/60 (80%)
Frame = +2 / +3
Query: 320 NTQWPCQAGKGYYGRGPLQISWNFNYGPAGQSIGFDGLGDPDAVARSAVLAFRSALWYWM 499
+ QWPC GK YYGRGP+Q+S N+NYGPAG++IG D L +PD VA A +AF++A+W+WM
Sbjct: 420 SAQWPCAPGKRYYGRGPIQLSHNYNYGPAGRAIGVDLLANPDLVATDATVAFKTAIWFWM 599
Score = 72.5 bits (152), Expect(2) = 4e-038
Identities = 27/47 (57%), Positives = 34/47 (72%)
Frame = +2 / +3
Query: 119 SCEANGFYTRDAFLAAAGYYPAFGRTGTVDDSKREIAAFFGNANHET 259
+C+A GFYT DAF+AAA +P FG TG+ D KRE+AAF +HET
Sbjct: 186 ACQAKGFYTYDAFVAAASAFPGFGSTGSADAHKREVAAFLAQTSHET 326
>gb|BF626132.3|BF626132 HVSMEa0015P16f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0015P16f, mRNA sequence
Length = 478
Score = 152 bits (326), Expect(2) = 5e-038
Identities = 61/131 (46%), Positives = 73/131 (55%)
Frame = +2 / +1
Query: 50 NNASVASIVTPXXXXXXXXXXXXSCEANGFYTRDAFLAAAGYYPAFGRTGTVDDSKREIA 229
+ SV + T C FYTR FLA A P + T D+ KREIA
Sbjct: 85 SGVSVEGVFTEALFNGIKSRAGNGCAGKSFYTRP*FLAGARANPNLRKGRTTDNGKREIA 264
Query: 230 AFFGNANHETIKFCYINEIDGPSKNYCDRNNTQWPCQAGKGYYGRGPLQISWNFNYGPAG 409
FF + HET CYI EI G +NYCDR T WPC +GKGYYG G LQ++WN+N AG
Sbjct: 265 VFFAHVTHETGHMCYIEEIGGARQNYCDRKCTHWPCTSGKGYYGPGALQLTWNYNSPAAG 444
Query: 410 QSIGFDGLGDP 442
S+GFDGL +P
Sbjct: 445 NSVGFDGLNNP 477
Score = 25.8 bits (50), Expect(2) = 5e-038
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +2 / +1
Query: 8 GAGCQSGPC 34
G GCQSGPC
Sbjct: 37 GDGCQSGPC 63
>emb|X78671.1|HVCHT2A H.vulgare mRNA for chitinase 2a
Length = 1028
Score = 79.4 bits (167), Expect(3) = 7e-038
Identities = 30/46 (65%), Positives = 35/46 (76%)
Frame = +2 / +2
Query: 122 CEANGFYTRDAFLAAAGYYPAFGRTGTVDDSKREIAAFFGNANHET 259
C A GFYT DAF+AAA +P FG TG+ DD KRE+AAFFG +HET
Sbjct: 203 CPARGFYTYDAFIAAANTFPGFGTTGSADDIKRELAAFFGQTSHET 340
Score = 71.6 bits (150), Expect(3) = 7e-038
Identities = 25/49 (51%), Positives = 38/49 (77%)
Frame = +2 / +2
Query: 353 YYGRGPLQISWNFNYGPAGQSIGFDGLGDPDAVARSAVLAFRSALWYWM 499
YYGRGP+Q++ NY AG++IG D + +PD V+ AV++FR+A+W+WM
Sbjct: 425 YYGRGPIQLTGRSNYDLAGRAIGKDLVSNPDLVSTDAVVSFRTAMWFWM 571
Score = 44.6 bits (91), Expect(3) = 7e-038
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = +2 / +2
Query: 533 GFGATIRAINGALECDGKNPNSVNNRVAYYKQFCQDFGVDPGNNLTC 673
G+G ING LEC ++ +R+ YY ++C G G NL C
Sbjct: 662 GYGVITNIINGGLECGMGRNDANVDRIGYYTRYCGMLGTATGGNLDC 802
>gb|BI780179.2|BI780179 EBma08_SQ001_K01_R maternal, 28 DPA, no treatment, cv Optic, EBma08
Hordeum vulgare subsp. vulgare cDNA clone
EBma08_SQ001_K01 5', mRNA sequence
Length = 604
Score = 103 bits (220), Expect(2) = 1e-037
Identities = 35/60 (58%), Positives = 48/60 (80%)
Frame = +2 / +1
Query: 320 NTQWPCQAGKGYYGRGPLQISWNFNYGPAGQSIGFDGLGDPDAVARSAVLAFRSALWYWM 499
+ QWPC GK YYGRGP+Q+S N++YGPAG++IG D L +PD VA A +AF++A+W+WM
Sbjct: 424 SAQWPCAPGKRYYGRGPIQLSHNYDYGPAGRAIGVDLLANPDLVATDATVAFKTAIWFWM 603
Score = 73.0 bits (153), Expect(2) = 1e-037
Identities = 27/47 (57%), Positives = 34/47 (72%)
Frame = +2 / +1
Query: 119 SCEANGFYTRDAFLAAAGYYPAFGRTGTVDDSKREIAAFFGNANHET 259
+C+A GFYT DAF+AAA +P FG TG+ D KRE+AAF +HET
Sbjct: 190 ACQAKGFYTYDAFVAAAAAFPGFGTTGSADAQKREVAAFLAQTSHET 330
>gb|AV926700.1|AV926700 AV926700 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd23h02 5', mRNA sequence
Length = 558
Score = 150 bits (323), Expect(2) = 1e-037
Identities = 59/113 (52%), Positives = 68/113 (60%)
Frame = +2 / +2
Query: 50 NNASVASIVTPXXXXXXXXXXXXSCEANGFYTRDAFLAAAGYYPAFGRTGTVDDSKREIA 229
+ SV +VT C FYTR +FLA A P FG+ T DD KREIA
Sbjct: 218 SGVSVEGVVTEAFFNGIKSRAGNGCAGKSFYTRPSFLAGARANPNFGKGRTTDDGKREIA 397
Query: 230 AFFGNANHETIKFCYINEIDGPSKNYCDRNNTQWPCQAGKGYYGRGPLQISWN 388
AFF + HET CYI EI G +NYCDR TQWPC +GKGYYGRGPLQ++WN
Sbjct: 398 AFFAHVTHETGHMCYIEEIGGARQNYCDRKYTQWPCTSGKGYYGRGPLQLTWN 556
Score = 25.8 bits (50), Expect(2) = 1e-037
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +2 / +2
Query: 8 GAGCQSGPC 34
G GCQSGPC
Sbjct: 170 GDGCQSGPC 196
>gb|BE455238.3|BE455238 HVSMEh0096L08f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0096L08f, mRNA sequence
Length = 710
Score = 102 bits (218), Expect(2) = 2e-037
Identities = 35/60 (58%), Positives = 47/60 (78%)
Frame = +2 / +3
Query: 320 NTQWPCQAGKGYYGRGPLQISWNFNYGPAGQSIGFDGLGDPDAVARSAVLAFRSALWYWM 499
+ QWPC GK YYGRGP+Q+S N+NYGPAG++IG D L +PD VA A +A ++A+W+WM
Sbjct: 423 SAQWPCAPGKRYYGRGPIQLSHNYNYGPAGRAIGVDLLANPDLVATDATVAVKTAIWFWM 602
Score = 73.0 bits (153), Expect(2) = 2e-037
Identities = 27/47 (57%), Positives = 34/47 (72%)
Frame = +2 / +3
Query: 119 SCEANGFYTRDAFLAAAGYYPAFGRTGTVDDSKREIAAFFGNANHET 259
+C+A GFYT DAF+AAA +P FG TG+ D KRE+AAF +HET
Sbjct: 189 ACQAKGFYTYDAFVAAASAFPGFGSTGSADAQKREVAAFLAQTSHET 329
>emb|X78672.1|HVCHT2B H.vulgare mRNA for chitinase 2b
Length = 1013
Score = 79.4 bits (167), Expect(3) = 2e-037
Identities = 30/46 (65%), Positives = 35/46 (76%)
Frame = +2 / +2
Query: 122 CEANGFYTRDAFLAAAGYYPAFGRTGTVDDSKREIAAFFGNANHET 259
C A GFYT DAF+AAA +P FG TG+ DD KRE+AAFFG +HET
Sbjct: 188 CPARGFYTYDAFIAAANTFPGFGTTGSADDVKRELAAFFGQTSHET 325
Score = 69.8 bits (146), Expect(3) = 2e-037
Identities = 24/49 (48%), Positives = 37/49 (75%)
Frame = +2 / +2
Query: 353 YYGRGPLQISWNFNYGPAGQSIGFDGLGDPDAVARSAVLAFRSALWYWM 499
YYGRGP+Q++ NY AG++IG D + +PD V+ AV++FR+ +W+WM
Sbjct: 410 YYGRGPIQLTGQSNYDLAGRAIGKDLVSNPDLVSTDAVVSFRTVIWFWM 556
Score = 44.6 bits (91), Expect(3) = 2e-037
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = +2 / +2
Query: 533 GFGATIRAINGALECDGKNPNSVNNRVAYYKQFCQDFGVDPGNNLTC 673
G+G ING LEC ++ +R+ YY ++C G G NL C
Sbjct: 647 GYGVITNIINGGLECGMGQNDANVDRIGYYTRYCGMLGTATGGNLDC 787
>gb|CB876675.1|CB876675 HP02A05T HP Hordeum vulgare subsp. vulgare cDNA clone HP02A05
5-PRIME, mRNA sequence
Length = 639
Score = 104 bits (221), Expect(4) = 2e-037
Identities = 34/58 (58%), Positives = 47/58 (81%)
Frame = +2 / +1
Query: 326 QWPCQAGKGYYGRGPLQISWNFNYGPAGQSIGFDGLGDPDAVARSAVLAFRSALWYWM 499
+WPC GK YYGRGP+Q+SWN+NYG AG++IG D L +PD VA A ++F++ALW+W+
Sbjct: 271 EWPCAPGKKYYGRGPMQLSWNYNYGQAGRAIGVDLLNNPDLVATDATVSFKAALWFWV 444
Score = 47.3 bits (97), Expect(4) = 2e-037
Identities = 17/27 (62%), Positives = 21/27 (77%)
Frame = +2 / +1
Query: 179 PAFGRTGTVDDSKREIAAFFGNANHET 259
PAFG TG+ + KRE+AAFFG +HET
Sbjct: 91 PAFGTTGSTETRKREVAAFFGQTSHET 171
Score = 31.8 bits (63), Expect(4) = 2e-037
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = +2 / +2
Query: 125 EANGFYTRDAFLAAA 169
EA GFYT DAFLAAA
Sbjct: 38 EARGFYTYDAFLAAA 82
Score = 28.1 bits (55), Expect(4) = 2e-037
Identities = 10/33 (30%), Positives = 16/33 (48%)
Frame = +2 / +1
Query: 536 FGATIRAINGALECDGKNPNSVNNRVAYYKQFC 634
+G I G EC V +R+ +YK++C
Sbjct: 538 YGVITNIIYGGRECGKGQNPDVVDRIGFYKRYC 636
>gb|BG368852.1|BG368852 HVSMEi0020P03f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0020P03f, mRNA sequence
Length = 623
Score = 102 bits (217), Expect(3) = 2e-037
Identities = 34/60 (56%), Positives = 47/60 (78%)
Frame = +2 / +2
Query: 320 NTQWPCQAGKGYYGRGPLQISWNFNYGPAGQSIGFDGLGDPDAVARSAVLAFRSALWYWM 499
+ QWPC GK YYGRGP+Q+S N+NYGPAG++IG D L +PD VA ++F++A+W+WM
Sbjct: 293 SAQWPCAPGKSYYGRGPIQLSHNYNYGPAGRAIGVDLLRNPDLVATDPTVSFKTAMWFWM 472
Score = 67.5 bits (141), Expect(3) = 2e-037
Identities = 26/47 (55%), Positives = 32/47 (68%)
Frame = +2 / +2
Query: 119 SCEANGFYTRDAFLAAAGYYPAFGRTGTVDDSKREIAAFFGNANHET 259
+C+A GFYT DAF+AAA + FG TG D KRE+AAF +HET
Sbjct: 59 ACQAKGFYTYDAFVAAASAFRGFGTTGGTDTRKREVAAFLAQTSHET 199
Score = 24.0 bits (46), Expect(3) = 2e-037
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = +2 / +2
Query: 533 GFGATIRAINGALEC 577
GFG +NG +EC
Sbjct: 563 GFGVITNIVNGGIEC 607
>gb|CA022080.1|CA022080 HZ42B20r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ42B20
5-PRIME, mRNA sequence
Length = 598
Score = 100 bits (212), Expect(3) = 6e-037
Identities = 33/60 (55%), Positives = 46/60 (76%)
Frame = +2 / +3
Query: 320 NTQWPCQAGKGYYGRGPLQISWNFNYGPAGQSIGFDGLGDPDAVARSAVLAFRSALWYWM 499
+ WPC GK YYGRGP+Q++ N+NYGPAG++IG D L +PD VA +AF++A+W+WM
Sbjct: 159 SADWPCAPGKQYYGRGPIQLTHNYNYGPAGRAIGVDLLNNPDLVASDPTVAFKTAIWFWM 338
Score = 56.1 bits (116), Expect(3) = 6e-037
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +2 / +3
Query: 533 GFGATIRAINGALECDGKNPNSVNNRVAYYKQFCQDFGVDPGNNLTC 673
G+G ING +EC + V +R+ +YK++C FG+ GNNL C
Sbjct: 429 GYGVITNVINGGIECGKGQNDKVADRIGFYKRYCDIFGIGYGNNLDC 569
Score = 36.3 bits (73), Expect(3) = 6e-037
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +2 / +3
Query: 197 GTVDDSKREIAAFFGNANHET 259
G +D KRE+AAFFG +HET
Sbjct: 3 GDLDTRKREVAAFFGQTSHET 65
>gb|CA013166.1|CA013166 HT07J12r HT Hordeum vulgare subsp. vulgare cDNA clone HT07J12
5-PRIME, mRNA sequence
Length = 639
Score = 102 bits (217), Expect(3) = 2e-036
Identities = 34/60 (56%), Positives = 47/60 (78%)
Frame = +2 / +3
Query: 320 NTQWPCQAGKGYYGRGPLQISWNFNYGPAGQSIGFDGLGDPDAVARSAVLAFRSALWYWM 499
+ QWPC GK YYGRGP+Q+S N+NYGPAG++IG D L +PD VA ++F++A+W+WM
Sbjct: 177 SAQWPCAPGKSYYGRGPIQLSHNYNYGPAGRAIGVDLLRNPDLVATDPTVSFKTAMWFWM 356
Score = 54.2 bits (112), Expect(3) = 2e-036
Identities = 19/47 (40%), Positives = 27/47 (57%)
Frame = +2 / +3
Query: 533 GFGATIRAINGALECDGKNPNSVNNRVAYYKQFCQDFGVDPGNNLTC 673
GFG +NG +EC + V +R+ +YK++C GV GNNL C
Sbjct: 447 GFGVITNIVNGGIECGHGQDSRVADRIGFYKRYCDILGVGYGNNLDC 587
Score = 34.5 bits (69), Expect(3) = 2e-036
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +2 / +3
Query: 188 GRTGTVDDSKREIAAFFGNANHET 259
G TG D KRE+AAF +HET
Sbjct: 12 GTTGGTDTRKREVAAFLAQTSHET 83
>gb|BG365326.1|BG365326 HVSMEi0002E22f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0002E22f, mRNA sequence
Length = 753
Score = 99.6 bits (211), Expect(2) = 2e-036
Identities = 33/60 (55%), Positives = 46/60 (76%)
Frame = +2 / +2
Query: 320 NTQWPCQAGKGYYGRGPLQISWNFNYGPAGQSIGFDGLGDPDAVARSAVLAFRSALWYWM 499
+ QWPC GK YYGRGP+Q+ N+NYGPAG++IG D L +PD VA A +AF++ +W+W+
Sbjct: 425 SAQWPCAPGKRYYGRGPIQLYHNYNYGPAGRAIGVDLLANPDLVATDATVAFKTGIWFWI 604
Score = 73.0 bits (153), Expect(2) = 2e-036
Identities = 27/47 (57%), Positives = 34/47 (72%)
Frame = +2 / +2
Query: 119 SCEANGFYTRDAFLAAAGYYPAFGRTGTVDDSKREIAAFFGNANHET 259
+C+A GFYT DAF+AAA +P FG TG+ D KRE+AAF +HET
Sbjct: 191 ACQAKGFYTYDAFVAAASAFPGFGSTGSADAQKREVAAFLAQTSHET 331
>gb|BG415203.1|BG415203 HVSMEk0005I16f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0005I16f, mRNA sequence
Length = 908
Score = 105 bits (225), Expect(3) = 7e-036
Identities = 36/60 (60%), Positives = 48/60 (80%)
Frame = +2 / +2
Query: 320 NTQWPCQAGKGYYGRGPLQISWNFNYGPAGQSIGFDGLGDPDAVARSAVLAFRSALWYWM 499
+ QWPC GK YYGRGP+Q+S N+NYGPAG++IG D L +PD VA A +AF++A+W+WM
Sbjct: 152 SAQWPCAPGKRYYGRGPIQLSHNYNYGPAGRAIGVDLLANPDLVATDATVAFKTAIWFWM 331
Score = 54.7 bits (113), Expect(3) = 7e-036
Identities = 20/47 (42%), Positives = 27/47 (57%)
Frame = +2 / +2
Query: 533 GFGATIRAINGALECDGKNPNSVNNRVAYYKQFCQDFGVDPGNNLTC 673
GFG ING +EC + V +R+ +YK++C GV GNNL C
Sbjct: 422 GFGVITNIINGGIECGHGQDSRVADRIGFYKRYCDILGVGYGNNLDC 562
Score = 28.1 bits (55), Expect(3) = 7e-036
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +2 / +2
Query: 206 DDSKREIAAFFGNANHET 259
D KRE+AAF +HET
Sbjct: 5 DAQKREVAAFLAQTSHET 58
>gb|BE602137.3|BE602137 HVSMEh0102K15f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0102K15f, mRNA sequence
Length = 651
Score = 97.3 bits (206), Expect(2) = 7e-036
Identities = 34/64 (53%), Positives = 44/64 (68%)
Frame = +2 / +3
Query: 320 NTQWPCQAGKGYYGRGPLQISWNFNYGPAGQSIGFDGLGDPDAVARSAVLAFRSALWYWM 499
+ QWPC GK YYGRGP+Q+S N+ YGPAG++IG D L PD VA A +A ++ +W WM
Sbjct: 423 SAQWPCTPGKRYYGRGPIQLSHNYKYGPAGRAIGVDMLAKPDLVATDATVALKTDIWLWM 602
Query: 500 NNVH 511
H
Sbjct: 603 TAQH 614
Score = 73.5 bits (154), Expect(2) = 7e-036
Identities = 27/47 (57%), Positives = 34/47 (72%)
Frame = +2 / +3
Query: 119 SCEANGFYTRDAFLAAAGYYPAFGRTGTVDDSKREIAAFFGNANHET 259
+C+A GFYT DAF+AAA +P FGR G+ D KRE+AAF +HET
Sbjct: 189 ACQAKGFYTYDAFVAAASAFPGFGRNGSADAQKREVAAFLAQTSHET 329
>gb|BF265478.2|BF265478 HV_CEa0012G06f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0012G06f, mRNA sequence
Length = 767
Score = 114 bits (243), Expect(3) = 1e-035
Identities = 39/75 (52%), Positives = 55/75 (73%)
Frame = +2 / -1
Query: 311 DRNNTQWPCQAGKGYYGRGPLQISWNFNYGPAGQSIGFDGLGDPDAVARSAVLAFRSALW 490
D N+ + PC + KGYYGRGPLQ++WN+NYG AG+ + F+GL +P+AVA+ L F++A W
Sbjct: 512 DSNHPE*PCTSRKGYYGRGPLQLTWNYNYGAAGEKLKFNGLDNPEAVAQDPALTFQAAFW 333
Query: 491 YWMNNVHGAIVSGQG 535
+WM NVH + G G
Sbjct: 332 FWMTNVHQVLPQGFG 288
Score = 94.1 bits (199), Expect(3) = 9e-028
Identities = 37/63 (58%), Positives = 44/63 (69%)
Frame = +2 / -1
Query: 491 YWMNNVHGAIVSGQGFGATIRAINGALECDGKNPNSVNNRVAYYKQFCQDFGVDPGNNLT 670
+W + V QGFGAT RAING +ECDGK P+ VN R YY +C+ FGVDPGNNLT
Sbjct: 338 FWFWMTNVHQVLPQGFGATTRAINGYVECDGKKPDLVNARAGYYMDYCKQFGVDPGNNLT 159
Query: 671 C*M 679
C*+
Sbjct: 158 C*V 150
Score = 46.4 bits (95), Expect(3) = 1e-035
Identities = 21/49 (42%), Positives = 25/49 (51%)
Frame = +2 / -1
Query: 152 AFLAAAGYYPAFGRTGTVDDSKREIAAFFGNANHETIKFCYINEIDGPS 298
+FL A YP F + EI AFF + +T CYI EIDGPS
Sbjct: 683 SFLFGAQAYPRFRERHHDRQRQEEITAFFAHVTQKTGHMCYIEEIDGPS 537
Score = 45.1 bits (92), Expect(3) = 9e-028
Identities = 17/28 (60%), Positives = 20/28 (71%)
Frame = +3 / -2
Query: 372 CRSPGTSTTGPRGRASASTGWATPTRWR 455
C GT+TTG GR+S+STGW T RWR
Sbjct: 451 CS*RGTTTTGRPGRSSSSTGWTTRRRWR 368
Score = 27.2 bits (53), Expect(3) = 1e-035
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +1 / -3
Query: 628 VLPGFRRRPGQQPH 669
+L RRRPG+QPH
Sbjct: 201 LLQAVRRRPGEQPH 160
Score = 22.1 bits (42), Expect(3) = 9e-028
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = +1 / -3
Query: 268 LLHQRDRRAEQ 300
+LH+ DRRAEQ
Sbjct: 567 VLHRGDRRAEQ 535
>gb|BG365857.2|BG365857 HVSMEi0004I09f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0004I09f, mRNA sequence
Length = 933
Score = 102 bits (217), Expect(2) = 1e-035
Identities = 34/60 (56%), Positives = 47/60 (78%)
Frame = +2 / +2
Query: 320 NTQWPCQAGKGYYGRGPLQISWNFNYGPAGQSIGFDGLGDPDAVARSAVLAFRSALWYWM 499
+ QWPC GK YYGRGP+Q+S N+NYGPAG++IG D L +PD VA ++F++A+W+WM
Sbjct: 560 SAQWPCAPGKSYYGRGPIQLSHNYNYGPAGRAIGVDLLRNPDLVATDPTVSFKTAMWFWM 739
Score = 67.5 bits (141), Expect(2) = 1e-035
Identities = 26/47 (55%), Positives = 32/47 (68%)
Frame = +2 / +2
Query: 119 SCEANGFYTRDAFLAAAGYYPAFGRTGTVDDSKREIAAFFGNANHET 259
+C+A GFYT DAF+AAA + FG TG D KRE+AAF +HET
Sbjct: 326 ACQAKGFYTYDAFVAAASAFRGFGTTGGTDTRKREVAAFLAQTSHET 466
>gb|BI949464.1|BI949464 HVSMEl0014A17f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0014A17f, mRNA sequence
Length = 872
Score = 102 bits (217), Expect(2) = 1e-035
Identities = 34/60 (56%), Positives = 47/60 (78%)
Frame = +2 / +2
Query: 320 NTQWPCQAGKGYYGRGPLQISWNFNYGPAGQSIGFDGLGDPDAVARSAVLAFRSALWYWM 499
+ QWPC GK YYGRGP+Q+S N+NYGPAG++IG D L +PD VA ++F++A+W+WM
Sbjct: 392 SAQWPCAPGKSYYGRGPIQLSHNYNYGPAGRAIGVDLLRNPDLVATDPTVSFKTAMWFWM 571
Score = 67.5 bits (141), Expect(2) = 1e-035
Identities = 26/47 (55%), Positives = 32/47 (68%)
Frame = +2 / +2
Query: 119 SCEANGFYTRDAFLAAAGYYPAFGRTGTVDDSKREIAAFFGNANHET 259
+C+A GFYT DAF+AAA + FG TG D KRE+AAF +HET
Sbjct: 158 ACQAKGFYTYDAFVAAASAFRGFGTTGGTDTRKREVAAFLAQTSHET 298
>emb|AJ276226.1|HVU276226 Hordeum vulgare mRNA for chitinase II (pathogenesis-related protein
3) (cht2 gene)
Length = 890
Score = 71.6 bits (150), Expect(3) = 2e-035
Identities = 25/49 (51%), Positives = 38/49 (77%)
Frame = +2 / +2
Query: 353 YYGRGPLQISWNFNYGPAGQSIGFDGLGDPDAVARSAVLAFRSALWYWM 499
YYGRGP+Q++ NY AG++IG D + +PD V+ AV++FR+A+W+WM
Sbjct: 416 YYGRGPIQLTGQSNYDLAGRAIGKDLVSNPDLVSTDAVVSFRTAIWFWM 562
Score = 71.2 bits (149), Expect(3) = 2e-035
Identities = 27/46 (58%), Positives = 32/46 (69%)
Frame = +2 / +2
Query: 122 CEANGFYTRDAFLAAAGYYPAFGRTGTVDDSKREIAAFFGNANHET 259
C GFYT F+AAA +P FG TG+ DD KRE+AAFFG +HET
Sbjct: 194 CPGQGFYTYVRFIAAANTFPGFGTTGSADDVKRELAAFFGQTSHET 331
Score = 44.6 bits (91), Expect(3) = 2e-035
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = +2 / +2
Query: 533 GFGATIRAINGALECDGKNPNSVNNRVAYYKQFCQDFGVDPGNNLTC 673
G+G ING LEC ++ +R+ YY ++C G G NL C
Sbjct: 653 GYGVITNIINGGLECGMGQNDANVDRIGYYTRYCGMLGTATGGNLDC 793
>gb|BJ546657.1|BJ546657 BJ546657 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak45j13 3', mRNA sequence
Length = 718
Score = 71.6 bits (150), Expect(3) = 2e-035
Identities = 25/49 (51%), Positives = 38/49 (77%)
Frame = +2 / -1
Query: 353 YYGRGPLQISWNFNYGPAGQSIGFDGLGDPDAVARSAVLAFRSALWYWM 499
YYGRGP+Q++ NY AG++IG D + +PD V+ AV++FR+A+W+WM
Sbjct: 511 YYGRGPIQLTGQSNYDLAGRAIGKDLVSNPDLVSTDAVVSFRTAIWFWM 365
Score = 71.2 bits (149), Expect(3) = 2e-035
Identities = 27/41 (65%), Positives = 32/41 (78%)
Frame = +2 / -1
Query: 137 FYTRDAFLAAAGYYPAFGRTGTVDDSKREIAAFFGNANHET 259
FYT DAF+AAA +P FG TG+ DD KRE+AAFFG +HET
Sbjct: 718 FYTYDAFIAAANTFPGFGTTGSADDVKRELAAFFGQTSHET 596
Score = 44.6 bits (91), Expect(3) = 2e-035
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = +2 / -1
Query: 533 GFGATIRAINGALECDGKNPNSVNNRVAYYKQFCQDFGVDPGNNLTC 673
G+G ING LEC ++ +R+ YY ++C G G NL C
Sbjct: 274 GYGVITNIINGGLECGMGQNDANVDRIGYYTRYCGMLGTATGGNLDC 134
>gb|BF264498.2|BF264498 HV_CEa0009J09f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0009J09f, mRNA sequence
Length = 842
Score = 72.5 bits (152), Expect(3) = 3e-035
Identities = 27/46 (58%), Positives = 32/46 (69%)
Frame = +2 / +3
Query: 122 CEANGFYTRDAFLAAAGYYPAFGRTGTVDDSKREIAAFFGNANHET 259
C A G YT DAF+A A +P FG TG+ DD KRE+A FFG +HET
Sbjct: 36 CPARGVYTYDAFIAGANTFPGFGTTGSADDIKRELAVFFGQTSHET 173
Score = 71.6 bits (150), Expect(3) = 3e-035
Identities = 25/49 (51%), Positives = 38/49 (77%)
Frame = +2 / +3
Query: 353 YYGRGPLQISWNFNYGPAGQSIGFDGLGDPDAVARSAVLAFRSALWYWM 499
YYGRGP+Q++ NY AG++IG D + +PD V+ AV++FR+A+W+WM
Sbjct: 258 YYGRGPIQLTGRSNYDLAGRAIGKDLVSNPDLVSTDAVVSFRTAMWFWM 404
Score = 42.8 bits (87), Expect(3) = 3e-035
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +2 / +3
Query: 533 GFGATIRAINGALECDGKNPNSVNNRVAYYKQFCQDFGVDPGNNLTC 673
G+G + ING LEC ++ +R+ YY ++C G G N C
Sbjct: 495 GYGVSTNIINGGLECGMGPDDANVDRIGYYTRYCGMLGTGTGGNPNC 635
>gb|BE519687.3|BE519687 HV_CEb0018G12f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0018G12f, mRNA sequence
Length = 523
Score = 148 bits (317), Expect = 5e-035
Identities = 53/79 (67%), Positives = 62/79 (78%)
Frame = +2 / +2
Query: 206 DDSKREIAAFFGNANHETIKFCYINEIDGPSKNYCDRNNTQWPCQAGKGYYGRGPLQISW 385
D+SKREIAAFF + HET CYI EI G NYCDR TQWPC +GKGYYGRGPLQ++W
Sbjct: 5 DNSKREIAAFFAHVTHETGHMCYIEEIGGARHNYCDRKYTQWPCTSGKGYYGRGPLQLTW 184
Query: 386 NFNYGPAGQSIGFDGLGDP 442
N+NYG AG+S+G+DGL P
Sbjct: 185 NYNYGAAGKSVGYDGLNKP 241
>gb|BJ544954.1|BJ544954 BJ544954 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak41e18 5', mRNA sequence
Length = 627
Score = 79.4 bits (167), Expect(3) = 5e-035
Identities = 30/46 (65%), Positives = 35/46 (76%)
Frame = +2 / +3
Query: 122 CEANGFYTRDAFLAAAGYYPAFGRTGTVDDSKREIAAFFGNANHET 259
C A GFYT DAF+AAA +P FG TG+ DD KRE+AAFFG +HET
Sbjct: 48 CPARGFYTYDAFIAAANTFPGFGTTGSADDVKRELAAFFGQTSHET 185
Score = 71.6 bits (150), Expect(3) = 5e-035
Identities = 25/49 (51%), Positives = 38/49 (77%)
Frame = +2 / +3
Query: 353 YYGRGPLQISWNFNYGPAGQSIGFDGLGDPDAVARSAVLAFRSALWYWM 499
YYGRGP+Q++ NY AG++IG D + +PD V+ AV++FR+A+W+WM
Sbjct: 270 YYGRGPIQLTGQSNYDLAGRAIGKDLVSNPDLVSTDAVVSFRTAIWFWM 416
Score = 35.0 bits (70), Expect(3) = 5e-035
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +2 / +3
Query: 533 GFGATIRAINGALECDGKNPNSVNNRVAYYKQFCQDFG 646
G+G ING LEC ++ +R+ YY ++C G
Sbjct: 507 GYGVITNIINGGLECGMGQNDANVDRIGYYTRYCGMLG 620
>gb|BI946904.1|BI946904 HVSMEl0002L21f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0002L21f, mRNA sequence
Length = 839
Score = 104 bits (222), Expect(2) = 9e-035
Identities = 36/60 (60%), Positives = 49/60 (81%)
Frame = +2 / +3
Query: 320 NTQWPCQAGKGYYGRGPLQISWNFNYGPAGQSIGFDGLGDPDAVARSAVLAFRSALWYWM 499
++QWPC GK Y+GRGP+QIS N+NYGPAG++IG D L +PD VA A ++F++ALW+WM
Sbjct: 378 SSQWPCAPGKKYFGRGPIQISHNYNYGPAGRAIGADLLNNPDLVATDATVSFKTALWFWM 557
Score = 62.5 bits (130), Expect(2) = 9e-035
Identities = 24/47 (51%), Positives = 30/47 (63%)
Frame = +2 / +3
Query: 119 SCEANGFYTRDAFLAAAGYYPAFGRTGTVDDSKREIAAFFGNANHET 259
+C+A GFY AF+AAA +P F TG D KRE+AAF +HET
Sbjct: 144 ACQAKGFYNYGAFVAAANSFPGFATTGGTDVRKREVAAFLAQTSHET 284
>gb|BF064990.1|BF064990 HV_CEb0022F13f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0022F13f, mRNA sequence
Length = 824
Score = 79.4 bits (167), Expect(3) = 1e-034
Identities = 30/46 (65%), Positives = 35/46 (76%)
Frame = +2 / +1
Query: 122 CEANGFYTRDAFLAAAGYYPAFGRTGTVDDSKREIAAFFGNANHET 259
C A GFYT DAF+AAA +P FG TG+ DD KRE+AAFFG +HET
Sbjct: 205 CPARGFYTYDAFIAAANTFPGFGTTGSADDVKRELAAFFGQTSHET 342
Score = 71.6 bits (150), Expect(3) = 1e-034
Identities = 25/49 (51%), Positives = 38/49 (77%)
Frame = +2 / +1
Query: 353 YYGRGPLQISWNFNYGPAGQSIGFDGLGDPDAVARSAVLAFRSALWYWM 499
YYGRGP+Q++ NY AG++IG D + +PD V+ AV++FR+A+W+WM
Sbjct: 427 YYGRGPIQLTGQSNYDLAGRAIGKDLVSNPDLVSTDAVVSFRTAIWFWM 573
Score = 33.6 bits (67), Expect(3) = 1e-034
Identities = 14/47 (29%), Positives = 21/47 (44%)
Frame = +2 / +1
Query: 533 GFGATIRAINGALECDGKNPNSVNNRVAYYKQFCQDFGVDPGNNLTC 673
G+G ING LEC ++ +R+ YY + + G N C
Sbjct: 664 GYGVITNIINGGLECRMGQNHANVDRIGYYTPYWRMLGTANRGNFDC 804
>gb|AL499683.1|AL499683 AL499683 Hordeum vulgare Barke etiolated leaves Hordeum vulgare
subsp. vulgare cDNA clone HK01K20r 3', mRNA sequence
Length = 652
Score = 83.5 bits (176), Expect(3) = 2e-034
Identities = 29/54 (53%), Positives = 40/54 (74%)
Frame = +2 / +2
Query: 320 NTQWPCQAGKGYYGRGPLQISWNFNYGPAGQSIGFDGLGDPDAVARSAVLAFRS 481
+ WPC GK YYGRGP+Q++ N+NYGPAG++IG D L +PD VA +AF++
Sbjct: 458 SADWPCAPGKQYYGRGPIQLTHNYNYGPAGRAIGVDLLNNPDLVASDPTVAFKT 619
Score = 81.7 bits (172), Expect(3) = 2e-034
Identities = 32/47 (68%), Positives = 37/47 (78%)
Frame = +2 / +2
Query: 119 SCEANGFYTRDAFLAAAGYYPAFGRTGTVDDSKREIAAFFGNANHET 259
+C A GFYT DAFLAAAG +PAFG TG +D KRE+AAFFG +HET
Sbjct: 224 ACLARGFYTYDAFLAAAGAFPAFGTTGDLDTRKREVAAFFGQTSHET 364
Score = 21.7 bits (41), Expect(3) = 2e-034
Identities = 5/8 (62%), Positives = 7/8 (87%)
Frame = +2 / +3
Query: 476 RSALWYWM 499
R A+W+WM
Sbjct: 615 RXAIWFWM 638
>gb|BE195290.2|BE195290 HVSMEh0088N04f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0088N04f, mRNA sequence
Length = 628
Score = 92.3 bits (195), Expect(2) = 3e-034
Identities = 33/60 (55%), Positives = 44/60 (73%)
Frame = +2 / +3
Query: 320 NTQWPCQAGKGYYGRGPLQISWNFNYGPAGQSIGFDGLGDPDAVARSAVLAFRSALWYWM 499
+ QWPC GK YYGRGP+Q+S N+NYGPAG + D L +PD VA A +AF++A+ +WM
Sbjct: 423 SAQWPCAPGKRYYGRGPIQLSHNYNYGPAGPAHRVDLLANPDLVATDATVAFKTAILFWM 602
Score = 73.0 bits (153), Expect(2) = 3e-034
Identities = 27/47 (57%), Positives = 34/47 (72%)
Frame = +2 / +3
Query: 119 SCEANGFYTRDAFLAAAGYYPAFGRTGTVDDSKREIAAFFGNANHET 259
+C+A GFYT DAF+AAA +P FG TG+ D KRE+AAF +HET
Sbjct: 189 ACQAKGFYTYDAFVAAASAFPGFGSTGSADAQKREVAAFLAQTSHET 329
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 276,890,933
Number of Sequences: 312970
Number of extensions: 4182632
Number of successful extensions: 62692
Number of sequences better than 1.0e-020: 208
length of database: 58,378,179
effective HSP length: 52
effective length of database: 42,103,739
effective search space used: 9473341275
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)