TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3866391.2.1
(613 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BU968861.1|BU968861 HB08M23r BC Hordeum vulgare subsp. v... 179 4e-077
gb|BF628635.2|BF628635 HVSMEb0006N15f Hordeum vulgare seedl... 178 2e-076
gb|AV915997.1|AV915997 AV915997 K. Sato unpublished cDNA li... 177 3e-076
gb|BJ466861.1|BJ466861 BJ466861 K. Sato unpublished cDNA li... 172 3e-072
gb|AV914567.1|AV914567 AV914567 K. Sato unpublished cDNA li... 172 6e-072
gb|AV916927.1|AV916927 AV916927 K. Sato unpublished cDNA li... 172 2e-071
gb|AV921112.1|AV921112 AV921112 K. Sato unpublished cDNA li... 177 5e-069
gb|AV919647.1|AV919647 AV919647 K. Sato unpublished cDNA li... 172 2e-068
gb|AV913934.1|AV913934 AV913934 K. Sato unpublished cDNA li... 172 4e-067
gb|BJ464184.1|BJ464184 BJ464184 K. Sato unpublished cDNA li... 166 5e-065
gb|AV918301.1|AV918301 AV918301 K. Sato unpublished cDNA li... 172 4e-064
gb|BG301188.1|BG301188 HVSMEb0019N18f Hordeum vulgare seedl... 118 9e-062
gb|BJ544646.1|BJ544646 BJ544646 K. Sato unpublished cDNA li... 139 2e-059
gb|BJ545019.1|BJ545019 BJ545019 K. Sato unpublished cDNA li... 139 4e-059
gb|BJ453643.1|BJ453643 BJ453643 K. Sato unpublished cDNA li... 171 8e-059
gb|BM816874.1|BM816874 HB105E09_SK.ab1 HB Hordeum vulgare s... 139 2e-057
gb|AV918176.1|AV918176 AV918176 K. Sato unpublished cDNA li... 172 5e-057
gb|AV936726.1|AV936726 AV936726 K. Sato unpublished cDNA li... 143 6e-056
gb|BJ546119.1|BJ546119 BJ546119 K. Sato unpublished cDNA li... 139 8e-056
gb|BJ463196.1|BJ463196 BJ463196 K. Sato unpublished cDNA li... 137 7e-055
gb|AV922405.1|AV922405 AV922405 K. Sato unpublished cDNA li... 171 1e-054
gb|AV930421.1|AV930421 AV930421 K. Sato unpublished cDNA li... 143 2e-051
gb|AV936356.1|AV936356 AV936356 K. Sato unpublished cDNA li... 143 8e-051
gb|AV934105.1|AV934105 AV934105 K. Sato unpublished cDNA li... 143 9e-051
gb|BJ452936.1|BJ452936 BJ452936 K. Sato unpublished cDNA li... 166 9e-051
gb|AV934098.1|AV934098 AV934098 K. Sato unpublished cDNA li... 122 1e-050
gb|BJ465003.1|BJ465003 BJ465003 K. Sato unpublished cDNA li... 164 3e-050
gb|BJ548006.1|BJ548006 BJ548006 K. Sato unpublished cDNA li... 143 4e-050
gb|AV917238.1|AV917238 AV917238 K. Sato unpublished cDNA li... 122 6e-050
gb|AV918446.1|AV918446 AV918446 K. Sato unpublished cDNA li... 158 1e-048
gb|AV927306.1|AV927306 AV927306 K. Sato unpublished cDNA li... 158 1e-048
gb|AV936516.1|AV936516 AV936516 K. Sato unpublished cDNA li... 143 2e-048
gb|BJ548975.1|BJ548975 BJ548975 K. Sato unpublished cDNA li... 143 3e-047
gb|BJ548386.1|BJ548386 BJ548386 K. Sato unpublished cDNA li... 143 4e-047
gb|BJ548998.1|BJ548998 BJ548998 K. Sato unpublished cDNA li... 143 5e-047
gb|AV936349.1|AV936349 AV936349 K. Sato unpublished cDNA li... 143 5e-047
gb|AV920965.1|AV920965 AV920965 K. Sato unpublished cDNA li... 152 8e-047
gb|BJ547960.1|BJ547960 BJ547960 K. Sato unpublished cDNA li... 143 1e-046
gb|BJ464493.1|BJ464493 BJ464493 K. Sato unpublished cDNA li... 122 2e-045
gb|AV918673.1|AV918673 AV918673 K. Sato unpublished cDNA li... 144 2e-044
gb|AV913374.1|AV913374 AV913374 K. Sato unpublished cDNA li... 144 2e-044
gb|BJ460485.1|BJ460485 BJ460485 K. Sato unpublished cDNA li... 146 2e-043
gb|AV921548.1|AV921548 AV921548 K. Sato unpublished cDNA li... 93 1e-042
gb|BJ546501.1|BJ546501 BJ546501 K. Sato unpublished cDNA li... 139 7e-042
gb|BJ547149.1|BJ547149 BJ547149 K. Sato unpublished cDNA li... 113 7e-042
gb|AV935198.1|AV935198 AV935198 K. Sato unpublished cDNA li... 138 1e-041
gb|AV912854.1|AV912854 AV912854 K. Sato unpublished cDNA li... 113 3e-041
gb|BE215637.1|BE215637 HV_CEb0007H18f Hordeum vulgare seedl... 109 9e-041
gb|BG415142.2|BG415142 HVSMEk0005E23f Hordeum vulgare testa... 99 7e-039
gb|BJ549009.1|BJ549009 BJ549009 K. Sato unpublished cDNA li... 126 6e-038
gb|BG416486.2|BG416486 HVSMEk0012I14f Hordeum vulgare testa... 110 2e-037
gb|AU252324.1|AU252324 AU252324 salt-stressed barley root c... 83 2e-037
gb|BJ545191.1|BJ545191 BJ545191 K. Sato unpublished cDNA li... 116 1e-036
gb|BF253422.2|BF253422 HVSMEf0001G02f Hordeum vulgare seedl... 106 1e-035
gb|AV917596.1|AV917596 AV917596 K. Sato unpublished cDNA li... 93 6e-035
gb|BI776301.2|BI776301 EBem04_SQ001_H10_R embryo, 12 DPA, n... 105 3e-034
gb|BJ464550.1|BJ464550 BJ464550 K. Sato unpublished cDNA li... 96 9e-034
gb|BQ471267.1|BQ471267 HV01P03T HV Hordeum vulgare subsp. v... 90 1e-033
gb|AU252310.1|AU252310 AU252310 salt-stressed barley root c... 103 2e-032
gb|CA019622.1|CA019622 HV12J09r HV Hordeum vulgare subsp. v... 122 2e-032
gb|BF624750.2|BF624750 HVSMEa0017K07f Hordeum vulgare seedl... 115 3e-032
gb|AY989887.1| Hordeum vulgare subsp. vulgare cytochrome P4... 85 4e-032
emb|AJ495774.1|HVU495774 Hordeum vulgare partial mRNA for p... 83 2e-031
gb|BF629412.3|BF629412 HVSMEb0012D18f Hordeum vulgare seedl... 86 2e-031
gb|AV919454.1|AV919454 AV919454 K. Sato unpublished cDNA li... 90 2e-031
gb|BJ463386.1|BJ463386 BJ463386 K. Sato unpublished cDNA li... 90 4e-031
gb|CA015705.1|CA015705 HV12J09u HV Hordeum vulgare subsp. v... 93 4e-031
gb|CA009631.1|CA009631 HU14K18r HU Hordeum vulgare subsp. v... 77 5e-031
gb|BJ466813.1|BJ466813 BJ466813 K. Sato unpublished cDNA li... 90 8e-031
gb|AV916579.1|AV916579 AV916579 K. Sato unpublished cDNA li... 71 1e-030
gb|BF259778.3|BF259778 HVSMEf0020D20f Hordeum vulgare seedl... 110 1e-030
gb|BI958239.1|BI958239 HVSMEn0014A11f Hordeum vulgare rachi... 106 1e-030
gb|BI960706.1|BI960706 HVSMEn0001B07f Hordeum vulgare rachi... 108 7e-030
gb|BJ461185.1|BJ461185 BJ461185 K. Sato unpublished cDNA li... 96 7e-030
gb|AV930901.1|AV930901 AV930901 K. Sato unpublished cDNA li... 95 1e-029
gb|BE216646.1|BE216646 HV_CEb0011B08f Hordeum vulgare seedl... 65 2e-029
gb|AV917230.1|AV917230 AV917230 K. Sato unpublished cDNA li... 90 2e-029
gb|BJ464883.1|BJ464883 BJ464883 K. Sato unpublished cDNA li... 90 2e-029
gb|CA030582.1|CA030582 HX07H18r HX Hordeum vulgare subsp. v... 67 2e-029
gb|CA025677.1|CA025677 HZ52M20r HZ Hordeum vulgare subsp. v... 105 2e-029
gb|BI956493.1|BI956493 HVSMEn0003M04f Hordeum vulgare rachi... 103 3e-029
gb|CA005397.1|CA005397 HU10K20u HU Hordeum vulgare subsp. v... 109 3e-029
gb|BQ758724.1|BQ758724 EBma07_SQ002_J15_R maternal, 21 DPA,... 102 6e-029
gb|BI960513.1|BI960513 HVSMEn0024N22f Hordeum vulgare rachi... 105 9e-029
gb|BU999462.1|BU999462 HI14J11r HI Hordeum vulgare subsp. v... 87 2e-028
gb|CA028447.1|CA028447 HZ61P23r HZ Hordeum vulgare subsp. v... 88 4e-028
gb|CA019349.1|CA019349 HV11L11r HV Hordeum vulgare subsp. v... 90 6e-028
gb|CA029164.1|CA029164 HZ64G11r HZ Hordeum vulgare subsp. v... 122 1e-027
gb|BI955765.1|BI955765 HVSMEm0024G17f Hordeum vulgare green... 97 4e-027
gb|BI777730.2|BI777730 EBro08_SQ001_K12_R root, 3 week, dro... 95 2e-026
gb|CB880227.1|CB880227 HM05O04w HM Hordeum vulgare subsp. v... 91 3e-026
gb|CA016039.1|CA016039 HV10M21u HV Hordeum vulgare subsp. v... 87 3e-026
gb|BJ546669.1|BJ546669 BJ546669 K. Sato unpublished cDNA li... 116 8e-026
gb|BE519761.3|BE519761 HV_CEb0021C04f Hordeum vulgare seedl... 86 2e-025
gb|AU252316.1|AU252316 AU252316 salt-stressed barley root c... 67 4e-025
gb|BM817083.1|BM817083 HC01F04_T3.ab1 HC Hordeum vulgare su... 114 5e-025
gb|BF627303.3|BF627303 HVSMEb0004I01f Hordeum vulgare seedl... 90 8e-025
gb|AV922397.1|AV922397 AV922397 K. Sato unpublished cDNA li... 90 8e-025
gb|BJ466913.1|BJ466913 BJ466913 K. Sato unpublished cDNA li... 90 8e-025
gb|AV919240.1|AV919240 AV919240 K. Sato unpublished cDNA li... 90 8e-025
gb|AV922497.1|AV922497 AV922497 K. Sato unpublished cDNA li... 90 8e-025
gb|BG365432.1|BG365432 HVSMEi0002K17f Hordeum vulgare 20 DA... 113 1e-024
gb|AV917809.1|AV917809 AV917809 K. Sato unpublished cDNA li... 90 1e-024
gb|CV056681.1|CV056681 BNEL1E1 Barley EST endosperm library... 93 1e-024
gb|AV929028.1|AV929028 AV929028 K. Sato unpublished cDNA li... 78 1e-024
gb|CA018612.1|CA018612 HV09C09r HV Hordeum vulgare subsp. v... 67 1e-024
gb|AY551434.1| Hordeum vulgare subsp. vulgare ent-kaurene o... 93 2e-024
gb|AV931728.1|AV931728 AV931728 K. Sato unpublished cDNA li... 91 2e-024
gb|BQ664209.1|BQ664209 HV02F12u HV Hordeum vulgare subsp. v... 111 3e-024
gb|BQ767330.1|BQ767330 EBro08_SQ008_H18_R root, 3 week, dro... 110 7e-024
gb|BF631513.2|BF631513 HVSMEb0016D19f Hordeum vulgare seedl... 83 7e-024
gb|AU252315.1|AU252315 AU252315 salt-stressed barley root c... 110 9e-024
gb|CV060077.1|CV060077 BNEL54b3 Barley EST endosperm librar... 91 9e-024
gb|BM816704.1|BM816704 HB01G04_T3.ab1 HB Hordeum vulgare su... 84 2e-023
gb|AV919113.1|AV919113 AV919113 K. Sato unpublished cDNA li... 90 6e-023
gb|AV913156.1|AV913156 AV913156 K. Sato unpublished cDNA li... 106 8e-023
gb|AV915851.1|AV915851 AV915851 K. Sato unpublished cDNA li... 106 8e-023
gb|AL500947.1|AL500947 AL500947 Hordeum vulgare Barke roots... 90 1e-022
gb|BQ458589.1|BQ458589 HA04M20r HA Hordeum vulgare subsp. v... 88 2e-022
gb|CA012057.1|CA012057 HT04F04r HT Hordeum vulgare subsp. v... 50 3e-022
gb|AJ436646.1|AJ436646 AJ436646 S00002 Hordeum vulgare subs... 81 5e-022
gb|AV922603.1|AV922603 AV922603 K. Sato unpublished cDNA li... 81 6e-022
gb|AV921527.1|AV921527 AV921527 K. Sato unpublished cDNA li... 81 6e-022
gb|BE519743.1|BE519743 HV_CEb0021A21f Hordeum vulgare seedl... 103 8e-022
gb|BJ475646.1|BJ475646 BJ475646 K. Sato unpublished cDNA li... 76 1e-021
gb|AL504160.1|AL504160 AL504160 Hordeum vulgare Barke roots... 67 5e-021
gb|BJ465891.1|BJ465891 BJ465891 K. Sato unpublished cDNA li... 78 5e-021
gb|BJ467535.1|BJ467535 BJ467535 K. Sato unpublished cDNA li... 78 5e-021
gb|BI779253.2|BI779253 EBro01_SQ003_H11_R root, 3 week, hyd... 100 5e-021
gb|AJ434580.1|AJ434580 AJ434580 S00002 Hordeum vulgare subs... 100 7e-021
>gb|BU968861.1|BU968861 HB08M23r BC Hordeum vulgare subsp. vulgare cDNA clone HB08M23
5-PRIME, mRNA sequence
Length = 624
Score = 179 bits (385), Expect(3) = 4e-077
Identities = 73/93 (78%), Positives = 82/93 (88%)
Frame = +2 / +2
Query: 245 INNGTEIVTEDELHSLSYLKAVVKETLRLHMPAPLLVPHLSMADCTIQGYTIPSGTRTIV 424
I G +VTED+L+ L+YLKAV+KETLRLHMPAPLLVPHL+MADC I GYTIPSGTR IV
Sbjct: 242 IPKGKHMVTEDDLNHLAYLKAVIKETLRLHMPAPLLVPHLAMADCIINGYTIPSGTRVIV 421
Query: 425 NSWALARDPSCWERAEEFMPERFMEGGSAAAMD 523
NS A+ARDPS WE AEEF+PERFM+GGSAAAMD
Sbjct: 422 NSRAIARDPSSWESAEEFLPERFMQGGSAAAMD 520
Score = 118 bits (253), Expect(3) = 2e-053
Identities = 50/77 (64%), Positives = 63/77 (81%)
Frame = +2 / +2
Query: 56 FIHVLLSLQQEYNLTRDQIKAQLVVMFEAGTDTSFIVLEYAMVQLMRNPHLMTKLQAEVR 235
+IH LLS+Q+EYNLTR+Q+KAQLV+MF AGTDTS+IV+EYAM +LM+NP LMTKLQAEVR
Sbjct: 56 YIHDLLSIQKEYNLTREQVKAQLVIMFGAGTDTSYIVMEYAMARLMQNPDLMTKLQAEVR 235
Query: 236 STIINNGTEIVTEDELH 286
S+I + +D H
Sbjct: 236 SSIPKGKHMVTEDDLNH 286
Score = 101 bits (215), Expect(3) = 2e-053
Identities = 48/85 (56%), Positives = 52/85 (61%)
Frame = +3 / +3
Query: 267 SPRTSSTAYPTSRQSSKRRCGSTCRLHSSCPTSPWPTAPYKGTRYRREHEPSSTAGLSRG 446
S RT T +PT R S+R G TC CP SPWPTA T YR SS AGLSRG
Sbjct: 264 SQRTILTIWPT*RP*SRRHSGFTCLRRFWCPISPWPTAS*TATPYRPGRASSSIAGLSRG 443
Query: 447 TPAAGREPRSSCPSASWRAAVPQPW 521
PAAGR RSSC SAS +AAV +PW
Sbjct: 444 IPAAGRARRSSCLSASCKAAVLRPW 518
Score = 100 bits (212), Expect(3) = 1e-033
Identities = 46/85 (54%), Positives = 51/85 (60%)
Frame = +1 / +1
Query: 268 HRGRAPQPILPQGSRQRDAAAPHAGSTPRAPPLHGRLHHTRVHDTVGNTNHRQQLGSREG 447
HRGR+ LP+G Q D A HA + AP HGRLHH R+H TV + HRQ G REG
Sbjct: 265 HRGRS*PSGLPKGRDQGDTPASHACAASGAPSRHGRLHHKRLHHTVRDARHRQ*PGYREG 444
Query: 448 PQLLGESRGVHARALHGGRQCRSHG 522
Q LGE GV A ALH RQC HG
Sbjct: 445 SQQLGERGGVPA*ALHARRQCCGHG 519
Score = 98.2 bits (208), Expect(3) = 1e-043
Identities = 49/89 (55%), Positives = 57/89 (64%)
Frame = -2 / -1
Query: 492 KRSGMNXXXXXXXXXXXXXXXXLTMVRVPDGIVYPCMVQSAMERWGTRSGAGMWSRSVSL 313
KRSG N LTM RVPDG+V P M+QSAM RWGTRSGAGM SRSVSL
Sbjct: 489 KRSGRNSSALSQLLGSLAIARLLTMTRVPDGMV*PFMMQSAMARWGTRSGAGM*SRSVSL 310
Query: 312 TTALR*DRLWSSSSVTISVPLLIMVLLTS 226
TA R* R SSSVT+ PL +++L ++
Sbjct: 309 ITAFR*ARWLRSSSVTMCFPLGMLLLTSA 223
Score = 96.8 bits (205), Expect(3) = 4e-077
Identities = 40/62 (64%), Positives = 44/62 (70%)
Frame = +1 / +1
Query: 58 HPCLALPSARVQPDERSDQGAAGGHVRSWH*HILHSAGIRHGSADAKPPPDDQATSRGEE 237
HP LA S RVQP + + Q + G HV SWH HI+HS GIRHGSA AKP P DQAT RGEE
Sbjct: 58 HPRLAFDSERVQPHKGTGQSSVGDHVWSWHGHIIHSDGIRHGSAHAKPRPHDQATGRGEE 237
Query: 238 HH 243
H
Sbjct: 238 *H 243
Score = 91.3 bits (193), Expect(3) = 3e-034
Identities = 48/76 (63%), Positives = 53/76 (69%)
Frame = -2 / -1
Query: 285 WSSSSVTISVPLLIMVLLTSACSLVIRWGFRIS*TMAYSSTMKDVSVPASNMTTSCALI* 106
W SS L M+LLTSACSLV+R GF +S MAYS TM DVSVPA NM T+ AL
Sbjct: 285 WLRSSSVTMCFPLGMLLLTSACSLVMRSGFCMSRAMAYSITMYDVSVPAPNMITN*ALTC 106
Query: 105 SLVRLYSC*RESKTWM 58
SLVRLYS * ESK+WM
Sbjct: 105 SLVRLYSF*IESKSWM 58
Score = 87.7 bits (185), Expect(3) = 1e-043
Identities = 36/61 (59%), Positives = 44/61 (72%)
Frame = -1 / -3
Query: 235 PHLGL*LGHQVGVSHQLNHGVFQHYEGCVSASFEHDHQLRLDLISRQVVLLLKGEQDMDE 56
PHLGL*LGH+VGV H+ +HGVF HY CV AS +HDHQL DL +VVL L +Q +D
Sbjct: 235 PHLGL*LGHEVGVLHEPSHGVFHHYV*CVRASSKHDHQLSFDLFPCEVVLFLNRKQVVDV 56
Query: 55 I 53
+
Sbjct: 55 V 53
Score = 68.0 bits (142), Expect(3) = 3e-034
Identities = 33/88 (37%), Positives = 47/88 (53%)
Frame = -1 / -3
Query: 523 VHGCGTXXXXXXXXXXXXGSLPAAGVPRESPAVDDGSCSRRYRVPLYGAXXXXXXXXXEW 344
+HG T +LPAAG+PR+SPA+DD + RY V +Y A +
Sbjct: 520 IHGRSTAALHEALRQELLRALPAAGIPRDSPAIDDDARPGRYGVAVYDAVGHGEMGHQKR 341
Query: 343 SRHVEPQRLFDDCLEVG*AVELVLGDYL 260
RHV+P+ L D L VG V++VL D++
Sbjct: 340 RRHVKPECLLDHGL*VGQMVKIVLCDHV 257
Score = 66.1 bits (138), Expect(3) = 2e-024
Identities = 33/76 (43%), Positives = 36/76 (47%)
Frame = -3 / -2
Query: 521 PWLRHCXXXXXXXXXXXRLSPSSWGPSREPSC*RWFVFPTVSCTLVWCSRPWRGGARGVE 342
PW +HC SPS W PSR P *R TV C+ + CSRPWR GA
Sbjct: 518 PWPQHCRLA*SAQAGTPPRSPSCWDPSR*PGY*R*RASRTVWCSRL*CSRPWRDGAPEAA 339
Query: 341 PACGAAASL*RLP*GR 294
AC A S * P GR
Sbjct: 338 QACEAGVSP*SRPLGR 291
Score = 63.4 bits (132), Expect(3) = 2e-024
Identities = 26/35 (74%), Positives = 28/35 (80%)
Frame = -3 / -2
Query: 236 SSPRLVAWSSGGGFASAEPWRIPAL*RMCQCQLRT 132
SSPR VAWS G GFA AEPWRIP+L MC CQL+T
Sbjct: 236 SSPRPVAWS*GRGFA*AEPWRIPSLCMMCPCQLQT 132
Score = 55.1 bits (114), Expect(3) = 1e-033
Identities = 22/32 (68%), Positives = 25/32 (78%)
Frame = +3 / +3
Query: 141 LALTHPS*CWNTPWFS*CETPT**PSYKPR*G 236
LA TH +* WNTPW C+TPT *PSY+PR*G
Sbjct: 141 LARTHHT**WNTPWLGSCKTPTS*PSYRPR*G 236
Score = 51.0 bits (105), Expect(3) = 4e-077
Identities = 20/35 (57%), Positives = 24/35 (68%)
Frame = +2 / +2
Query: 503 GSAAAMDSNKGNDFQYIPFGAGRRMCPAISFATAA 607
G +AA KGN F Y+PFG RR+CP I+FA AA
Sbjct: 497 GGSAAAMDYKGNGFLYLPFGTXRRICPGINFAIAA 601
Score = 29.0 bits (57), Expect(3) = 1e-043
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -2 / -1
Query: 606 AAVAKLMAGHILLPAPNGMYWKSF 535
AA+AK + GHIL PNG K F
Sbjct: 600 AAMAKFIPGHILRXVPNGR*RKPF 529
Score = 27.2 bits (53), Expect(3) = 2e-053
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +1 / +1
Query: 532 GERLPVHTVRRREKDVPRHQL 594
GER P+ VR +D+PR++L
Sbjct: 526 GERFPLPAVRDGAEDMPRYKL 588
Score = 25.4 bits (49), Expect(3) = 1e-033
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +3 / +3
Query: 531 RGTTSSTYRSAQGEGCAP 584
RGT SST RS + G AP
Sbjct: 525 RGTVSSTCRSGRXGGYAP 578
Score = 23.5 bits (45), Expect(3) = 3e-034
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -1 / -3
Query: 583 GAHPSPCAERYVLEVVPLV 527
GA+P ER V E VPL+
Sbjct: 577 GAYPPXRPERQVEETVPLI 521
Score = 21.7 bits (41), Expect(3) = 2e-024
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -3 / -2
Query: 596 QS*WRGTSFSLRRTVCTGSRSP 531
+S +RG S + RT G+RSP
Sbjct: 590 RSLYRGISSAPSRTAGRGNRSP 525
>gb|BF628635.2|BF628635 HVSMEb0006N15f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0006N15f, mRNA sequence
Length = 710
Score = 178 bits (383), Expect(3) = 2e-076
Identities = 72/93 (77%), Positives = 82/93 (88%)
Frame = +2 / +2
Query: 245 INNGTEIVTEDELHSLSYLKAVVKETLRLHMPAPLLVPHLSMADCTIQGYTIPSGTRTIV 424
I G +VTED+L+ L+YLKAV+KETLRLHMPAPLLVPHL+MADC I GYTIPSGTR IV
Sbjct: 299 IPKGKHMVTEDDLNHLAYLKAVIKETLRLHMPAPLLVPHLAMADCVINGYTIPSGTRVIV 478
Query: 425 NSWALARDPSCWERAEEFMPERFMEGGSAAAMD 523
NS A+ARDP+ WE AEEF+PERFM+GGSAAAMD
Sbjct: 479 NSRAIARDPNSWESAEEFLPERFMQGGSAAAMD 577
Score = 118 bits (253), Expect(3) = 3e-053
Identities = 50/77 (64%), Positives = 63/77 (81%)
Frame = +2 / +2
Query: 56 FIHVLLSLQQEYNLTRDQIKAQLVVMFEAGTDTSFIVLEYAMVQLMRNPHLMTKLQAEVR 235
+IH LLS+Q+EYNLTR+Q+KAQLV+MF AGTDTS+IV+EYAM +LM+NP LMTKLQAEVR
Sbjct: 113 YIHDLLSIQKEYNLTREQVKAQLVIMFGAGTDTSYIVMEYAMARLMQNPDLMTKLQAEVR 292
Query: 236 STIINNGTEIVTEDELH 286
S+I + +D H
Sbjct: 293 SSIPKGKHMVTEDDLNH 343
Score = 99.6 bits (211), Expect(3) = 3e-053
Identities = 47/85 (55%), Positives = 51/85 (60%)
Frame = +3 / +3
Query: 267 SPRTSSTAYPTSRQSSKRRCGSTCRLHSSCPTSPWPTAPYKGTRYRREHEPSSTAGLSRG 446
S RT T +PT R S+R G TC CP SPWPTA T YR SS AGLSRG
Sbjct: 321 SQRTILTIWPT*RP*SRRHSGFTCLRRFWCPISPWPTAS*TATPYRPGRASSSIAGLSRG 500
Query: 447 TPAAGREPRSSCPSASWRAAVPQPW 521
P AGR RSSC SAS +AAV +PW
Sbjct: 501 IPTAGRARRSSCLSASCKAAVLRPW 575
Score = 97.7 bits (207), Expect(3) = 5e-044
Identities = 49/89 (55%), Positives = 56/89 (62%)
Frame = -2 / -3
Query: 492 KRSGMNXXXXXXXXXXXXXXXXLTMVRVPDGIVYPCMVQSAMERWGTRSGAGMWSRSVSL 313
KRSG N LTM RVPDG+V P M QSAM RWGTRSGAGM SRSVSL
Sbjct: 546 KRSGRNSSALSQLLGSLAIARLLTMTRVPDGMV*PFMTQSAMARWGTRSGAGM*SRSVSL 367
Query: 312 TTALR*DRLWSSSSVTISVPLLIMVLLTS 226
TA R* R SSSVT+ PL +++L ++
Sbjct: 366 ITAFR*ARWLRSSSVTMCFPLGMLLLTSA 280
Score = 96.8 bits (205), Expect(3) = 2e-076
Identities = 40/62 (64%), Positives = 44/62 (70%)
Frame = +1 / +1
Query: 58 HPCLALPSARVQPDERSDQGAAGGHVRSWH*HILHSAGIRHGSADAKPPPDDQATSRGEE 237
HP LA S RVQP + + Q + G HV SWH HI+HS GIRHGSA AKP P DQAT RGEE
Sbjct: 115 HPRLAFDSERVQPHKGAGQSSVGDHVWSWHGHIIHSDGIRHGSAHAKPRPHDQATGRGEE 294
Query: 238 HH 243
H
Sbjct: 295 *H 300
Score = 96.4 bits (204), Expect(3) = 2e-032
Identities = 45/85 (52%), Positives = 50/85 (58%)
Frame = +1 / +1
Query: 268 HRGRAPQPILPQGSRQRDAAAPHAGSTPRAPPLHGRLHHTRVHDTVGNTNHRQQLGSREG 447
HRGR+ LP+G Q D A HA + AP HGRL H R+H TV + HRQ G REG
Sbjct: 322 HRGRS*PSGLPKGRDQGDTPASHACAASGAPSRHGRLRHKRLHHTVRDARHRQ*PGYREG 501
Query: 448 PQLLGESRGVHARALHGGRQCRSHG 522
Q LGE GV A ALH RQC HG
Sbjct: 502 SQQLGERGGVPA*ALHARRQCCGHG 576
Score = 91.3 bits (193), Expect(3) = 3e-033
Identities = 48/76 (63%), Positives = 53/76 (69%)
Frame = -2 / -3
Query: 285 WSSSSVTISVPLLIMVLLTSACSLVIRWGFRIS*TMAYSSTMKDVSVPASNMTTSCALI* 106
W SS L M+LLTSACSLV+R GF +S MAYS TM DVSVPA NM T+ AL
Sbjct: 342 WLRSSSVTMCFPLGMLLLTSACSLVMRSGFCMSRAMAYSITMYDVSVPAPNMITN*ALTC 163
Query: 105 SLVRLYSC*RESKTWM 58
SLVRLYS * ESK+WM
Sbjct: 162 SLVRLYSF*IESKSWM 115
Score = 88.6 bits (187), Expect(3) = 5e-044
Identities = 36/61 (59%), Positives = 45/61 (73%)
Frame = -1 / -2
Query: 235 PHLGL*LGHQVGVSHQLNHGVFQHYEGCVSASFEHDHQLRLDLISRQVVLLLKGEQDMDE 56
PHLGL*LGH+VGV H+ +HGVF HY CV AS +HDHQL DL+ +VVL L +Q +D
Sbjct: 292 PHLGL*LGHEVGVLHEPSHGVFHHYV*CVRASSKHDHQLSFDLLPCEVVLFLNRKQVVDV 113
Query: 55 I 53
+
Sbjct: 112 V 110
Score = 66.1 bits (138), Expect(2) = 9e-024
Identities = 32/88 (36%), Positives = 46/88 (52%)
Frame = -1 / -2
Query: 523 VHGCGTXXXXXXXXXXXXGSLPAAGVPRESPAVDDGSCSRRYRVPLYGAXXXXXXXXXEW 344
+HG T +LPA G+PR+SPA+DD + RY V +Y A +
Sbjct: 577 IHGRSTAALHEALRQELLRALPAVGIPRDSPAIDDDARPGRYGVAVYDAVGHGEMGHQKR 398
Query: 343 SRHVEPQRLFDDCLEVG*AVELVLGDYL 260
RHV+P+ L D L VG V++VL D++
Sbjct: 397 RRHVKPECLLDHGL*VGQMVKIVLCDHV 314
Score = 63.4 bits (132), Expect(2) = 9e-024
Identities = 26/35 (74%), Positives = 28/35 (80%)
Frame = -3 / -1
Query: 236 SSPRLVAWSSGGGFASAEPWRIPAL*RMCQCQLRT 132
SSPR VAWS G GFA AEPWRIP+L MC CQL+T
Sbjct: 293 SSPRPVAWS*GRGFA*AEPWRIPSLCMMCPCQLQT 189
Score = 60.6 bits (126), Expect(3) = 3e-033
Identities = 32/76 (42%), Positives = 35/76 (46%)
Frame = -3 / -1
Query: 521 PWLRHCXXXXXXXXXXXRLSPSSWGPSREPSC*RWFVFPTVSCTLVWCSRPWRGGARGVE 342
PW +HC SPS W PSR P *R TV C+ + SRPWR GA
Sbjct: 575 PWPQHCRLA*SAQAGTPPRSPSCWDPSR*PGY*R*RASRTVWCSRL*RSRPWRDGAPEAA 396
Query: 341 PACGAAASL*RLP*GR 294
AC A S * P GR
Sbjct: 395 QACEAGVSP*SRPLGR 348
Score = 55.1 bits (114), Expect(3) = 2e-032
Identities = 22/32 (68%), Positives = 25/32 (78%)
Frame = +3 / +3
Query: 141 LALTHPS*CWNTPWFS*CETPT**PSYKPR*G 236
LA TH +* WNTPW C+TPT *PSY+PR*G
Sbjct: 198 LARTHHT**WNTPWLGSCKTPTS*PSYRPR*G 293
Score = 49.6 bits (102), Expect(3) = 2e-076
Identities = 19/35 (54%), Positives = 23/35 (65%)
Frame = +2 / +2
Query: 503 GSAAAMDSNKGNDFQYIPFGAGRRMCPAISFATAA 607
G +AA KGN F Y+PFG GRR+CP I+ A A
Sbjct: 554 GGSAAAMDYKGNGFLYLPFGTGRRICPGINLAIGA 658
Score = 29.5 bits (58), Expect(3) = 5e-044
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -2 / -3
Query: 606 AAVAKLMAGHILLPAPNGMYWKSF 535
A +A+ + GHIL P PNG K F
Sbjct: 657 APMARFIPGHILRPVPNGR*RKPF 586
Score = 28.6 bits (56), Expect(3) = 3e-053
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +3 / +3
Query: 531 RGTTSSTYRSAQGEGCAP 584
RGT SST RS +G G AP
Sbjct: 582 RGTVSSTCRSGRGGGYAP 635
Score = 27.6 bits (54), Expect(3) = 3e-033
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -1 / -2
Query: 583 GAHPSPCAERYVLEVVPLV 527
GA+P P ER V E VPL+
Sbjct: 634 GAYPPPRPERQVEETVPLI 578
Score = 25.4 bits (49), Expect(3) = 2e-032
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +1 / +1
Query: 532 GERLPVHTVRRREKDVPRHQ 591
GER P+ VR +D+PR++
Sbjct: 583 GERFPLPAVRDGAEDMPRYK 642
>gb|AV915997.1|AV915997 AV915997 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags1a14 5', mRNA sequence
Length = 606
Score = 177 bits (380), Expect(3) = 3e-076
Identities = 72/93 (77%), Positives = 81/93 (87%)
Frame = +2 / +3
Query: 245 INNGTEIVTEDELHSLSYLKAVVKETLRLHMPAPLLVPHLSMADCTIQGYTIPSGTRTIV 424
I G +V ED+L+ L+YLKAV+KETLRLHMPAPLLVPHL+MADC I GYTIPSGTR IV
Sbjct: 219 IPKGKHMVIEDDLNHLAYLKAVIKETLRLHMPAPLLVPHLAMADCVINGYTIPSGTRVIV 398
Query: 425 NSWALARDPSCWERAEEFMPERFMEGGSAAAMD 523
NS A+ARDPS WE AEEF+PERFM+GGSAAAMD
Sbjct: 399 NSRAIARDPSSWESAEEFLPERFMQGGSAAAMD 497
Score = 120 bits (256), Expect(3) = 4e-055
Identities = 50/77 (64%), Positives = 64/77 (83%)
Frame = +2 / +3
Query: 56 FIHVLLSLQQEYNLTRDQIKAQLVVMFEAGTDTSFIVLEYAMVQLMRNPHLMTKLQAEVR 235
+IH LLS+Q+EYNLTR+Q+KAQLV+MF AGTDTS+IV+EYAM +LM+NP LMTKLQAEVR
Sbjct: 33 YIHDLLSIQKEYNLTREQVKAQLVIMFGAGTDTSYIVMEYAMARLMQNPDLMTKLQAEVR 212
Query: 236 STIINNGTEIVTEDELH 286
S+I ++ +D H
Sbjct: 213 SSIPKGKHMVIEDDLNH 263
Score = 104 bits (222), Expect(3) = 4e-055
Identities = 48/83 (57%), Positives = 52/83 (62%)
Frame = +3 / +1
Query: 273 RTSSTAYPTSRQSSKRRCGSTCRLHSSCPTSPWPTAPYKGTRYRREHEPSSTAGLSRGTP 452
RT T +PT R SS+R G TC CP SPWP A T YR H SS AGLSRG P
Sbjct: 247 RTILTIWPT*RPSSRRHSGFTCLRRFWCPISPWPIAS*TATPYRPGHASSSIAGLSRGIP 426
Query: 453 AAGREPRSSCPSASWRAAVPQPW 521
AAGR RSSC SAS +AAV +PW
Sbjct: 427 AAGRARRSSCLSASCKAAVLRPW 495
Score = 99.6 bits (211), Expect(3) = 1e-033
Identities = 46/85 (54%), Positives = 51/85 (60%)
Frame = +1 / +2
Query: 268 HRGRAPQPILPQGSRQRDAAAPHAGSTPRAPPLHGRLHHTRVHDTVGNTNHRQQLGSREG 447
HRGR+ LP+G Q D A HA + AP HGRL H R+H TV +T HRQ G REG
Sbjct: 242 HRGRS*PSGLPKGRHQGDTPASHACAASGAPSRHGRLRHKRLHHTVRDTRHRQ*PGYREG 421
Query: 448 PQLLGESRGVHARALHGGRQCRSHG 522
Q LGE GV A ALH RQC HG
Sbjct: 422 SQQLGERGGVPA*ALHARRQCCGHG 496
Score = 96.8 bits (205), Expect(3) = 3e-076
Identities = 40/62 (64%), Positives = 44/62 (70%)
Frame = +1 / +2
Query: 58 HPCLALPSARVQPDERSDQGAAGGHVRSWH*HILHSAGIRHGSADAKPPPDDQATSRGEE 237
HP LA S RVQP + + Q + G HV SWH HI+HS GIRHGSA AKP P DQAT RGEE
Sbjct: 35 HPRLAFDSERVQPHKGAGQSSVGDHVWSWHGHIIHSDGIRHGSAHAKPRPHDQATGRGEE 214
Query: 238 HH 243
H
Sbjct: 215 *H 220
Score = 96.4 bits (204), Expect(3) = 2e-043
Identities = 48/89 (53%), Positives = 56/89 (62%)
Frame = -2 / -3
Query: 492 KRSGMNXXXXXXXXXXXXXXXXLTMVRVPDGIVYPCMVQSAMERWGTRSGAGMWSRSVSL 313
KRSG N LTM RVPDG+V P M QSAM RWGTRSGAGM SRSVSL
Sbjct: 466 KRSGRNSSALSQLLGSLAIARLLTMTRVPDGMV*PFMTQSAMARWGTRSGAGM*SRSVSL 287
Query: 312 TTALR*DRLWSSSSVTISVPLLIMVLLTS 226
TA R* R SSS+T+ PL +++L ++
Sbjct: 286 MTAFR*ARWLRSSSMTMCFPLGMLLLTSA 200
Score = 90.9 bits (192), Expect(3) = 7e-033
Identities = 48/76 (63%), Positives = 53/76 (69%)
Frame = -2 / -3
Query: 285 WSSSSVTISVPLLIMVLLTSACSLVIRWGFRIS*TMAYSSTMKDVSVPASNMTTSCALI* 106
W SS L M+LLTSACSLV+R GF +S MAYS TM DVSVPA NM T+ AL
Sbjct: 262 WLRSSSMTMCFPLGMLLLTSACSLVMRSGFCMSRAMAYSITMYDVSVPAPNMITN*ALTC 83
Query: 105 SLVRLYSC*RESKTWM 58
SLVRLYS * ESK+WM
Sbjct: 82 SLVRLYSF*IESKSWM 35
Score = 88.6 bits (187), Expect(3) = 2e-043
Identities = 36/61 (59%), Positives = 45/61 (73%)
Frame = -1 / -2
Query: 235 PHLGL*LGHQVGVSHQLNHGVFQHYEGCVSASFEHDHQLRLDLISRQVVLLLKGEQDMDE 56
PHLGL*LGH+VGV H+ +HGVF HY CV AS +HDHQL DL+ +VVL L +Q +D
Sbjct: 212 PHLGL*LGHEVGVLHEPSHGVFHHYV*CVRASSKHDHQLSFDLLPCEVVLFLNRKQVVDV 33
Query: 55 I 53
+
Sbjct: 32 V 30
Score = 76.7 bits (161), Expect(2) = 7e-027
Identities = 35/88 (39%), Positives = 49/88 (55%)
Frame = -1 / -2
Query: 523 VHGCGTXXXXXXXXXXXXGSLPAAGVPRESPAVDDGSCSRRYRVPLYGAXXXXXXXXXEW 344
+HG T +LPAAG+PR+SPA+DD +C RY V +Y A +
Sbjct: 497 IHGRSTAALHEALRQELLRALPAAGIPRDSPAIDDDACPGRYGVAVYDAIGHGEMGHQKR 318
Query: 343 SRHVEPQRLFDDCLEVG*AVELVLGDYL 260
RHV+P+ L DD L VG V++VL D++
Sbjct: 317 RRHVKPECLLDDGL*VGQMVKIVLYDHV 234
Score = 63.4 bits (132), Expect(2) = 7e-027
Identities = 26/35 (74%), Positives = 28/35 (80%)
Frame = -3 / -1
Query: 236 SSPRLVAWSSGGGFASAEPWRIPAL*RMCQCQLRT 132
SSPR VAWS G GFA AEPWRIP+L MC CQL+T
Sbjct: 213 SSPRPVAWS*GRGFA*AEPWRIPSLCMMCPCQLQT 109
Score = 59.7 bits (124), Expect(3) = 7e-033
Identities = 32/76 (42%), Positives = 36/76 (47%)
Frame = -3 / -1
Query: 521 PWLRHCXXXXXXXXXXXRLSPSSWGPSREPSC*RWFVFPTVSCTLVWCSRPWRGGARGVE 342
PW +HC SPS W PSR P *R V TV C+ + +RPWR GA
Sbjct: 495 PWPQHCRLA*SAQAGTPPRSPSCWDPSR*PGY*R*RVSRTVWCSRL*RNRPWRDGAPEAA 316
Query: 341 PACGAAASL*RLP*GR 294
AC A S * P GR
Sbjct: 315 QACEAGVSP**RPLGR 268
Score = 55.1 bits (114), Expect(3) = 1e-033
Identities = 22/32 (68%), Positives = 25/32 (78%)
Frame = +3 / +1
Query: 141 LALTHPS*CWNTPWFS*CETPT**PSYKPR*G 236
LA TH +* WNTPW C+TPT *PSY+PR*G
Sbjct: 118 LARTHHT**WNTPWLGSCKTPTS*PSYRPR*G 213
Score = 50.6 bits (104), Expect(3) = 3e-076
Identities = 19/34 (55%), Positives = 23/34 (67%)
Frame = +2 / +3
Query: 503 GSAAAMDSNKGNDFQYIPFGAGRRMCPAISFATA 604
G +AA KGN F Y+PFG GRR+CP I+F A
Sbjct: 474 GGSAAAMDYKGNGFLYLPFGTGRRICPGINFXIA 575
Score = 28.6 bits (56), Expect(3) = 4e-055
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +3 / +1
Query: 531 RGTTSSTYRSAQGEGCAP 584
RGT SST RS +G G AP
Sbjct: 502 RGTVSSTCRSGRGGGYAP 555
Score = 28.6 bits (56), Expect(3) = 2e-043
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = -2 / -3
Query: 603 AVAKLMAGHILLPAPNGMYWKSF 535
A+ K GHIL P PNG K F
Sbjct: 574 AMXKFXPGHILRPVPNGR*RKPF 506
Score = 27.6 bits (54), Expect(3) = 7e-033
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -1 / -2
Query: 583 GAHPSPCAERYVLEVVPLV 527
GA+P P ER V E VPL+
Sbjct: 554 GAYPPPRPERQVEETVPLI 498
Score = 25.8 bits (50), Expect(3) = 1e-033
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +1 / +2
Query: 532 GERLPVHTVRRREKDVPRHQL 594
GER P+ VR +D+PR +L
Sbjct: 503 GERFPLPAVRDGAEDMPRXKL 565
>gb|BJ466861.1|BJ466861 BJ466861 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags34j09 3', mRNA sequence
Length = 719
Score = 172 bits (371), Expect(3) = 3e-072
Identities = 68/93 (73%), Positives = 78/93 (83%)
Frame = +2 / -3
Query: 245 INNGTEIVTEDELHSLSYLKAVVKETLRLHMPAPLLVPHLSMADCTIQGYTIPSGTRTIV 424
I G + VT+D+LH L YLKAV+KETLRLHMP PL+VPHLSM +C I GYTIPSGTRT +
Sbjct: 588 IPKGKDTVTQDDLHGLPYLKAVIKETLRLHMPGPLMVPHLSMDECIINGYTIPSGTRTFI 409
Query: 425 NSWALARDPSCWERAEEFMPERFMEGGSAAAMD 523
N++A+ RDPS WE EEFMPERFMEGGSAAAMD
Sbjct: 408 NTYAIQRDPSNWESPEEFMPERFMEGGSAAAMD 310
Score = 110 bits (235), Expect = 7e-024
Identities = 50/107 (46%), Positives = 62/107 (57%)
Frame = +1 / -2
Query: 202 PPDDQATSRGEEHHY**WNRDSHRGRAPQPILPQGSRQRDAAAPHAGSTPRAPPLHGRLH 381
PP + E H+ R H R+P+ LP+GS Q D A HAG+ AP LHGR+H
Sbjct: 631 PPRHGHATSRGEEHHTQGERHRHPRRSPRSALPKGSDQGDTPASHAGAAHGAPSLHGRMH 452
Query: 382 HTRVHDTVGNTNHRQQLGSREGPQLLGESRGVHARALHGGRQCRSHG 522
H R+HDT+G+ + Q L EG LGE RGVHA A+HG RQ HG
Sbjct: 451 HKRLHDTIGDAHFHQHLCYPEGS*QLGEPRGVHA*AVHGRRQRCRHG 311
Score = 104 bits (221), Expect(2) = 6e-041
Identities = 48/86 (55%), Positives = 51/86 (59%)
Frame = +3 / -1
Query: 267 SPRTSSTAYPTSRQSSKRRCGSTCRLHSSCPTSPWPTAPYKGTRYRREHEPSSTAGLSRG 446
SP+T ST PT RQ S+R G TCR S CP SPW A TRY R SST LSRG
Sbjct: 566 SPKTISTVCPT*RQ*SRRHSGFTCRGRSWCPISPWTNAS*TATRYHRGRALSSTPMLSRG 387
Query: 447 TPAAGREPRSSCPSASWRAAVPQPWT 524
A GR RSSC S SW+AA PWT
Sbjct: 386 ILATGRAQRSSCLSGSWKAAALPPWT 309
Score = 83.1 bits (175), Expect(2) = 6e-041
Identities = 36/55 (65%), Positives = 43/55 (78%)
Frame = +2 / -3
Query: 113 KAQLVVMFEAGTDTSFIVLEYAMVQLMRNPHLMTKLQAEVRSTIINNGTEIVTED 277
KAQL++MFEAGTDTS IVLEYAMV+LM+NP +M LQAEVRSTI + +D
Sbjct: 717 KAQLLIMFEAGTDTSTIVLEYAMVRLMQNPRVMAMLQAEVRSTIPKGKDTVTQDD 553
Score = 76.7 bits (161), Expect(3) = 3e-072
Identities = 30/44 (68%), Positives = 32/44 (72%)
Frame = +1 / -2
Query: 112 QGAAGGHVRSWH*HILHSAGIRHGSADAKPPPDDQATSRGEEHH 243
Q + HV SWH HI HS GIRHGSADA+PP ATSRGEEHH
Sbjct: 718 QSSVADHV*SWHGHINHSTGIRHGSADAEPPRHGHATSRGEEHH 587
Score = 74.8 bits (157), Expect(3) = 2e-034
Identities = 30/41 (73%), Positives = 32/41 (78%)
Frame = -1 / +1
Query: 241 GAPHLGL*LGHQVGVSHQLNHGVFQHYEGCVSASFEHDHQL 119
GAPHLGL* GH GV HQ NHGVFQ+Y CV ASF+HD QL
Sbjct: 589 GAPHLGL*HGHDAGVLHQPNHGVFQYYG*CVRASFKHDQQL 711
Score = 72.5 bits (152), Expect(3) = 6e-028
Identities = 28/37 (75%), Positives = 29/37 (78%)
Frame = -3 / +3
Query: 242 WCSSPRLVAWSSGGGFASAEPWRIPAL*RMCQCQLRT 132
WCSSPRLVAW GG ASAEPWRIP L MC CQL+T
Sbjct: 588 WCSSPRLVAWP*RGGSASAEPWRIPVLWLMCPCQLQT 698
Score = 61.1 bits (127), Expect(3) = 3e-072
Identities = 23/34 (67%), Positives = 27/34 (79%)
Frame = +2 / -3
Query: 503 GSAAAMDSNKGNDFQYIPFGAGRRMCPAISFATA 604
G +AA KGNDFQY PFG+GRR+CP I+FATA
Sbjct: 333 GGSAAAMDYKGNDFQYFPFGSGRRICPGINFATA 232
Score = 61.1 bits (127), Expect(3) = 2e-034
Identities = 30/67 (44%), Positives = 39/67 (58%)
Frame = -1 / +1
Query: 466 SLPAAGVPRESPAVDDGSCSRRYRVPLYGAXXXXXXXXXEWSRHVEPQRLFDDCLEVG*A 287
+LP A +P +S VD+ + R YRV +Y A E RHV+P+ L D CL VG
Sbjct: 367 ALPVARIPLDSIGVDESARPRWYRVAVYDAFVHGEMGHHERPRHVKPECLLDHCL*VGQT 546
Query: 286 VELVLGD 266
VE+VLGD
Sbjct: 547 VEIVLGD 567
Score = 53.8 bits (111), Expect(3) = 6e-028
Identities = 30/63 (47%), Positives = 32/63 (50%)
Frame = -3 / +3
Query: 464 SPSSWGPSREPSC*RWFVFPTVSCTLVWCSRPWRGGARGVEPACGAAASL*RLP*GRIGC 285
SPS PS C* P VSC+ + C RPWR GA PAC A S * LP GR
Sbjct: 369 SPSC*DPSG*HRC**KCASPMVSCSRL*CIRPWRDGAP*AAPACEAGVSP*SLPLGRADR 548
Query: 284 GAR 276
G R
Sbjct: 549 GDR 557
Score = 47.3 bits (97), Expect(3) = 2e-034
Identities = 18/23 (78%), Positives = 19/23 (82%)
Frame = -2 / +2
Query: 603 AVAKLMAGHILLPAPNGMYWKSF 535
AVAKL+ GHIL P PNG YWKSF
Sbjct: 233 AVAKLIPGHILRPDPNGKYWKSF 301
Score = 35.0 bits (70), Expect(3) = 6e-028
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = -1 / +1
Query: 607 GCGRKADGGAHPSPCAERYVLEVVPLVAVHG 515
G R+ D G +P+P +R VLE++PL+ G
Sbjct: 229 GRSREVDTGTYPAPGPKRKVLEIIPLIVHGG 321
>gb|AV914567.1|AV914567 AV914567 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags6p16 5', mRNA sequence
Length = 618
Score = 172 bits (371), Expect(4) = 6e-072
Identities = 68/93 (73%), Positives = 78/93 (83%)
Frame = +2 / +1
Query: 245 INNGTEIVTEDELHSLSYLKAVVKETLRLHMPAPLLVPHLSMADCTIQGYTIPSGTRTIV 424
I G + VT+D+LH L YLKAV+KETLRLHMP PL+VPHLSM +C I GYTIPSGTRT +
Sbjct: 292 IPKGKDTVTQDDLHGLPYLKAVIKETLRLHMPGPLMVPHLSMDECIINGYTIPSGTRTFI 471
Query: 425 NSWALARDPSCWERAEEFMPERFMEGGSAAAMD 523
N++A+ RDPS WE EEFMPERFMEGGSAAAMD
Sbjct: 472 NTYAIQRDPSNWESPEEFMPERFMEGGSAAAMD 570
Score = 110 bits (235), Expect = 7e-024
Identities = 50/107 (46%), Positives = 62/107 (57%)
Frame = +1 / +3
Query: 202 PPDDQATSRGEEHHY**WNRDSHRGRAPQPILPQGSRQRDAAAPHAGSTPRAPPLHGRLH 381
PP + E H+ R H R+P+ LP+GS Q D A HAG+ AP LHGR+H
Sbjct: 249 PPRHGHATSRGEEHHTQGERHRHPRRSPRSALPKGSDQGDTPASHAGAAHGAPSLHGRMH 428
Query: 382 HTRVHDTVGNTNHRQQLGSREGPQLLGESRGVHARALHGGRQCRSHG 522
H R+HDT+G+ + Q L EG LGE RGVHA A+HG RQ HG
Sbjct: 429 HKRLHDTIGDAHFHQHLCYPEGS*QLGEPRGVHA*AVHGRRQRCRHG 569
Score = 104 bits (221), Expect(3) = 4e-045
Identities = 48/86 (55%), Positives = 51/86 (59%)
Frame = +3 / +2
Query: 267 SPRTSSTAYPTSRQSSKRRCGSTCRLHSSCPTSPWPTAPYKGTRYRREHEPSSTAGLSRG 446
SP+T ST PT RQ S+R G TCR S CP SPW A TRY R SST LSRG
Sbjct: 314 SPKTISTVCPT*RQ*SRRHSGFTCRGRSWCPISPWTNAS*TATRYHRGRALSSTPMLSRG 493
Query: 447 TPAAGREPRSSCPSASWRAAVPQPWT 524
A GR RSSC S SW+AA PWT
Sbjct: 494 ILATGRAQRSSCLSGSWKAAALPPWT 571
Score = 87.7 bits (185), Expect(3) = 4e-045
Identities = 38/58 (65%), Positives = 45/58 (77%)
Frame = +2 / +1
Query: 104 DQIKAQLVVMFEAGTDTSFIVLEYAMVQLMRNPHLMTKLQAEVRSTIINNGTEIVTED 277
D IKAQL++MFEAGTDTS IVLEYAMV+LM+NP +M LQAEVRSTI + +D
Sbjct: 154 DHIKAQLLIMFEAGTDTSTIVLEYAMVRLMQNPRVMAMLQAEVRSTIPKGKDTVTQDD 327
Score = 79.4 bits (167), Expect(4) = 1e-036
Identities = 31/46 (67%), Positives = 35/46 (76%)
Frame = -1 / -1
Query: 241 GAPHLGL*LGHQVGVSHQLNHGVFQHYEGCVSASFEHDHQLRLDLI 104
GAPHLGL* GH GV HQ NHGVFQ+Y CV ASF+HD QL D++
Sbjct: 291 GAPHLGL*HGHDAGVLHQPNHGVFQYYG*CVRASFKHDQQLSFDMV 154
Score = 77.1 bits (162), Expect(4) = 6e-072
Identities = 31/47 (65%), Positives = 33/47 (70%)
Frame = +1 / +3
Query: 103 RSDQGAAGGHVRSWH*HILHSAGIRHGSADAKPPPDDQATSRGEEHH 243
R Q + HV SWH HI HS GIRHGSADA+PP ATSRGEEHH
Sbjct: 153 RPYQSSVADHV*SWHGHINHSTGIRHGSADAEPPRHGHATSRGEEHH 293
Score = 72.5 bits (152), Expect(4) = 1e-027
Identities = 28/37 (75%), Positives = 29/37 (78%)
Frame = -3 / -3
Query: 242 WCSSPRLVAWSSGGGFASAEPWRIPAL*RMCQCQLRT 132
WCSSPRLVAW GG ASAEPWRIP L MC CQL+T
Sbjct: 292 WCSSPRLVAWP*RGGSASAEPWRIPVLWLMCPCQLQT 182
Score = 61.1 bits (127), Expect(4) = 1e-036
Identities = 30/67 (44%), Positives = 39/67 (58%)
Frame = -1 / -1
Query: 466 SLPAAGVPRESPAVDDGSCSRRYRVPLYGAXXXXXXXXXEWSRHVEPQRLFDDCLEVG*A 287
+LP A +P +S VD+ + R YRV +Y A E RHV+P+ L D CL VG
Sbjct: 513 ALPVARIPLDSIGVDESARPRWYRVAVYDAFVHGEMGHHERPRHVKPECLLDHCL*VGQT 334
Query: 286 VELVLGD 266
VE+VLGD
Sbjct: 333 VEIVLGD 313
Score = 53.8 bits (111), Expect(4) = 1e-027
Identities = 30/63 (47%), Positives = 32/63 (50%)
Frame = -3 / -3
Query: 464 SPSSWGPSREPSC*RWFVFPTVSCTLVWCSRPWRGGARGVEPACGAAASL*RLP*GRIGC 285
SPS PS C* P VSC+ + C RPWR GA PAC A S * LP GR
Sbjct: 511 SPSC*DPSG*HRC**KCASPMVSCSRL*CIRPWRDGAP*AAPACEAGVSP*SLPLGRADR 332
Query: 284 GAR 276
G R
Sbjct: 331 GDR 323
Score = 42.3 bits (86), Expect(4) = 6e-072
Identities = 16/24 (66%), Positives = 18/24 (75%)
Frame = +2 / +1
Query: 503 GSAAAMDSNKGNDFQYIPFGAGRR 574
G +AA KGNDFQY PFG+GRR
Sbjct: 547 GGSAAAMDYKGNDFQYFPFGSGRR 618
Score = 38.2 bits (77), Expect(4) = 1e-036
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = -2 / -3
Query: 102 LVRLYSC*RESKTWMK 55
LVRLYSC* ESKTWMK
Sbjct: 151 LVRLYSC*TESKTWMK 104
Score = 35.9 bits (72), Expect(4) = 6e-072
Identities = 14/15 (93%), Positives = 15/15 (100%)
Frame = +2 / +3
Query: 56 FIHVLLSLQQEYNLT 100
FIHVLLS+QQEYNLT
Sbjct: 105 FIHVLLSVQQEYNLT 149
Score = 29.5 bits (58), Expect(4) = 1e-036
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = -2 / -2
Query: 573 LLPAPNGMYWKSF 535
L P PNG YWKSF
Sbjct: 617 LRPDPNGKYWKSF 579
Score = 27.6 bits (54), Expect(3) = 4e-045
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +1 / +2
Query: 40 GGGE*FHPCLALPSARVQP 96
G G+ HP LA SARVQP
Sbjct: 89 GRGQGLHPRLAFCSARVQP 145
Score = 25.8 bits (50), Expect(4) = 1e-027
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = -3 / -1
Query: 95 GCTLAEGRARHG*N 54
GCTLAE +AR G*+
Sbjct: 144 GCTLAEQKARRG*S 103
Score = 25.4 bits (49), Expect(4) = 1e-027
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = -1 / -1
Query: 574 PSPCAERYVLEVVPLVAVHG 515
P+P +R VLE++PL+ G
Sbjct: 618 PAPGPKRKVLEIIPLIVHGG 559
>gb|AV916927.1|AV916927 AV916927 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags20c01 5', mRNA sequence
Length = 533
Score = 172 bits (371), Expect(3) = 2e-071
Identities = 68/93 (73%), Positives = 78/93 (83%)
Frame = +2 / +1
Query: 245 INNGTEIVTEDELHSLSYLKAVVKETLRLHMPAPLLVPHLSMADCTIQGYTIPSGTRTIV 424
I G + VT+D+LH L YLKAV+KETLRLHMP PL+VPHLSM +C I GYTIPSGTRT +
Sbjct: 127 IPKGKDTVTQDDLHGLPYLKAVIKETLRLHMPGPLMVPHLSMDECIINGYTIPSGTRTFI 306
Query: 425 NSWALARDPSCWERAEEFMPERFMEGGSAAAMD 523
N++A+ RDPS WE EEFMPERFMEGGSAAAMD
Sbjct: 307 NTYAIQRDPSNWESPEEFMPERFMEGGSAAAMD 405
Score = 110 bits (235), Expect = 7e-024
Identities = 50/107 (46%), Positives = 62/107 (57%)
Frame = +1 / +3
Query: 202 PPDDQATSRGEEHHY**WNRDSHRGRAPQPILPQGSRQRDAAAPHAGSTPRAPPLHGRLH 381
PP + E H+ R H R+P+ LP+GS Q D A HAG+ AP LHGR+H
Sbjct: 84 PPRHGHATSRGEEHHTQGERHRHPRRSPRSALPKGSDQGDTPASHAGAAHGAPSLHGRMH 263
Query: 382 HTRVHDTVGNTNHRQQLGSREGPQLLGESRGVHARALHGGRQCRSHG 522
H R+HDT+G+ + Q L EG LGE RGVHA A+HG RQ HG
Sbjct: 264 HKRLHDTIGDAHFHQHLCYPEGS*QLGEPRGVHA*AVHGRRQRCRHG 404
Score = 104 bits (221), Expect(2) = 3e-040
Identities = 48/86 (55%), Positives = 51/86 (59%)
Frame = +3 / +2
Query: 267 SPRTSSTAYPTSRQSSKRRCGSTCRLHSSCPTSPWPTAPYKGTRYRREHEPSSTAGLSRG 446
SP+T ST PT RQ S+R G TCR S CP SPW A TRY R SST LSRG
Sbjct: 149 SPKTISTVCPT*RQ*SRRHSGFTCRGRSWCPISPWTNAS*TATRYHRGRALSSTPMLSRG 328
Query: 447 TPAAGREPRSSCPSASWRAAVPQPWT 524
A GR RSSC S SW+AA PWT
Sbjct: 329 ILATGRAQRSSCLSGSWKAAALPPWT 406
Score = 80.8 bits (170), Expect(2) = 3e-040
Identities = 35/54 (64%), Positives = 42/54 (77%)
Frame = +2 / +1
Query: 116 AQLVVMFEAGTDTSFIVLEYAMVQLMRNPHLMTKLQAEVRSTIINNGTEIVTED 277
AQL++MFEAGTDTS IVLEYAMV+LM+NP +M LQAEVRSTI + +D
Sbjct: 1 AQLLIMFEAGTDTSTIVLEYAMVRLMQNPRVMAMLQAEVRSTIPKGKDTVTQDD 162
Score = 74.8 bits (157), Expect(3) = 2e-034
Identities = 30/41 (73%), Positives = 32/41 (78%)
Frame = -1 / -3
Query: 241 GAPHLGL*LGHQVGVSHQLNHGVFQHYEGCVSASFEHDHQL 119
GAPHLGL* GH GV HQ NHGVFQ+Y CV ASF+HD QL
Sbjct: 126 GAPHLGL*HGHDAGVLHQPNHGVFQYYG*CVRASFKHDQQL 4
Score = 74.4 bits (156), Expect(3) = 2e-071
Identities = 29/38 (76%), Positives = 30/38 (78%)
Frame = +1 / +3
Query: 130 HVRSWH*HILHSAGIRHGSADAKPPPDDQATSRGEEHH 243
HV SWH HI HS GIRHGSADA+PP ATSRGEEHH
Sbjct: 15 HV*SWHGHINHSTGIRHGSADAEPPRHGHATSRGEEHH 128
Score = 72.5 bits (152), Expect(3) = 6e-028
Identities = 28/37 (75%), Positives = 29/37 (78%)
Frame = -3 / -2
Query: 242 WCSSPRLVAWSSGGGFASAEPWRIPAL*RMCQCQLRT 132
WCSSPRLVAW GG ASAEPWRIP L MC CQL+T
Sbjct: 127 WCSSPRLVAWP*RGGSASAEPWRIPVLWLMCPCQLQT 17
Score = 61.1 bits (127), Expect(3) = 2e-071
Identities = 23/34 (67%), Positives = 27/34 (79%)
Frame = +2 / +1
Query: 503 GSAAAMDSNKGNDFQYIPFGAGRRMCPAISFATA 604
G +AA KGNDFQY PFG+GRR+CP I+FATA
Sbjct: 382 GGSAAAMDYKGNDFQYFPFGSGRRICPGINFATA 483
Score = 61.1 bits (127), Expect(3) = 2e-034
Identities = 30/67 (44%), Positives = 39/67 (58%)
Frame = -1 / -3
Query: 466 SLPAAGVPRESPAVDDGSCSRRYRVPLYGAXXXXXXXXXEWSRHVEPQRLFDDCLEVG*A 287
+LP A +P +S VD+ + R YRV +Y A E RHV+P+ L D CL VG
Sbjct: 348 ALPVARIPLDSIGVDESARPRWYRVAVYDAFVHGEMGHHERPRHVKPECLLDHCL*VGQT 169
Query: 286 VELVLGD 266
VE+VLGD
Sbjct: 168 VEIVLGD 148
Score = 53.8 bits (111), Expect(3) = 6e-028
Identities = 30/63 (47%), Positives = 32/63 (50%)
Frame = -3 / -2
Query: 464 SPSSWGPSREPSC*RWFVFPTVSCTLVWCSRPWRGGARGVEPACGAAASL*RLP*GRIGC 285
SPS PS C* P VSC+ + C RPWR GA PAC A S * LP GR
Sbjct: 346 SPSC*DPSG*HRC**KCASPMVSCSRL*CIRPWRDGAP*AAPACEAGVSP*SLPLGRADR 167
Query: 284 GAR 276
G R
Sbjct: 166 GDR 158
Score = 47.3 bits (97), Expect(3) = 2e-034
Identities = 18/23 (78%), Positives = 19/23 (82%)
Frame = -2 / -1
Query: 603 AVAKLMAGHILLPAPNGMYWKSF 535
AVAKL+ GHIL P PNG YWKSF
Sbjct: 482 AVAKLIPGHILRPDPNGKYWKSF 414
Score = 35.0 bits (70), Expect(3) = 6e-028
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = -1 / -3
Query: 607 GCGRKADGGAHPSPCAERYVLEVVPLVAVHG 515
G R+ D G +P+P +R VLE++PL+ G
Sbjct: 486 GRSREVDTGTYPAPGPKRKVLEIIPLIVHGG 394
>gb|AV921112.1|AV921112 AV921112 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags1a14 3', mRNA sequence
Length = 746
Score = 177 bits (380), Expect(3) = 5e-069
Identities = 72/93 (77%), Positives = 81/93 (87%)
Frame = +2 / -1
Query: 245 INNGTEIVTEDELHSLSYLKAVVKETLRLHMPAPLLVPHLSMADCTIQGYTIPSGTRTIV 424
I G +V ED+L+ L+YLKAV+KETLRLHMPAPLLVPHL+MADC I GYTIPSGTR IV
Sbjct: 638 IPKGKHMVIEDDLNHLAYLKAVIKETLRLHMPAPLLVPHLAMADCVINGYTIPSGTRVIV 459
Query: 425 NSWALARDPSCWERAEEFMPERFMEGGSAAAMD 523
NS A+ARDPS WE AEEF+PERFM+GGSAAAMD
Sbjct: 458 NSRAIARDPSSWESAEEFLPERFMQGGSAAAMD 360
Score = 104 bits (222), Expect(3) = 4e-041
Identities = 48/83 (57%), Positives = 52/83 (62%)
Frame = +3 / -2
Query: 273 RTSSTAYPTSRQSSKRRCGSTCRLHSSCPTSPWPTAPYKGTRYRREHEPSSTAGLSRGTP 452
RT T +PT R SS+R G TC CP SPWP A T YR H SS AGLSRG P
Sbjct: 610 RTILTIWPT*RPSSRRHSGFTCLRRFWCPISPWPIAS*TATPYRPGHASSSIAGLSRGIP 431
Query: 453 AAGREPRSSCPSASWRAAVPQPW 521
AAGR RSSC SAS +AAV +PW
Sbjct: 430 AAGRARRSSCLSASCKAAVLRPW 362
Score = 99.6 bits (211), Expect(3) = 5e-034
Identities = 46/85 (54%), Positives = 51/85 (60%)
Frame = +1 / -3
Query: 268 HRGRAPQPILPQGSRQRDAAAPHAGSTPRAPPLHGRLHHTRVHDTVGNTNHRQQLGSREG 447
HRGR+ LP+G Q D A HA + AP HGRL H R+H TV +T HRQ G REG
Sbjct: 615 HRGRS*PSGLPKGRHQGDTPASHACAASGAPSRHGRLRHKRLHHTVRDTRHRQ*PGYREG 436
Query: 448 PQLLGESRGVHARALHGGRQCRSHG 522
Q LGE GV A ALH RQC HG
Sbjct: 435 SQQLGERGGVPA*ALHARRQCCGHG 361
Score = 96.4 bits (204), Expect(3) = 1e-036
Identities = 48/89 (53%), Positives = 56/89 (62%)
Frame = -2 / +1
Query: 492 KRSGMNXXXXXXXXXXXXXXXXLTMVRVPDGIVYPCMVQSAMERWGTRSGAGMWSRSVSL 313
KRSG N LTM RVPDG+V P M QSAM RWGTRSGAGM SRSVSL
Sbjct: 391 KRSGRNSSALSQLLGSLAIARLLTMTRVPDGMV*PFMTQSAMARWGTRSGAGM*SRSVSL 570
Query: 312 TTALR*DRLWSSSSVTISVPLLIMVLLTS 226
TA R* R SSS+T+ PL +++L ++
Sbjct: 571 MTAFR*ARWLRSSSMTMCFPLGMLLLTSA 657
Score = 76.7 bits (161), Expect(3) = 1e-028
Identities = 35/88 (39%), Positives = 49/88 (55%)
Frame = -1 / +3
Query: 523 VHGCGTXXXXXXXXXXXXGSLPAAGVPRESPAVDDGSCSRRYRVPLYGAXXXXXXXXXEW 344
+HG T +LPAAG+PR+SPA+DD +C RY V +Y A +
Sbjct: 360 IHGRSTAALHEALRQELLRALPAAGIPRDSPAIDDDACPGRYGVAVYDAIGHGEMGHQKR 539
Query: 343 SRHVEPQRLFDDCLEVG*AVELVLGDYL 260
RHV+P+ L DD L VG V++VL D++
Sbjct: 540 RRHVKPECLLDDGL*VGQMVKIVLYDHV 623
Score = 73.0 bits (153), Expect(3) = 4e-041
Identities = 31/51 (60%), Positives = 39/51 (76%)
Frame = +2 / -1
Query: 134 FEAGTDTSFIVLEYAMVQLMRNPHLMTKLQAEVRSTIINNGTEIVTEDELH 286
F AGTDTS+IV+EYAM +LM+NP LMTKLQAEVRS+I ++ +D H
Sbjct: 746 FXAGTDTSYIVMEYAMARLMQNPDLMTKLQAEVRSSIPKGKHMVIEDDLNH 594
Score = 68.9 bits (144), Expect(3) = 5e-069
Identities = 27/35 (77%), Positives = 28/35 (80%)
Frame = +1 / -3
Query: 139 SWH*HILHSAGIRHGSADAKPPPDDQATSRGEEHH 243
SWH HI+HS GIRHGSA AKP P DQAT RGEE H
Sbjct: 741 SWHGHIIHSDGIRHGSAHAKPRPHDQATGRGEE*H 637
Score = 61.1 bits (127), Expect(3) = 1e-036
Identities = 25/34 (73%), Positives = 27/34 (79%)
Frame = -3 / +2
Query: 236 SSPRLVAWSSGGGFASAEPWRIPAL*RMCQCQLR 135
SSPR VAWS G GFA AEPWRIP+L MC CQL+
Sbjct: 644 SSPRPVAWS*GRGFA*AEPWRIPSLCMMCPCQLQ 745
Score = 59.3 bits (123), Expect(3) = 1e-028
Identities = 23/32 (71%), Positives = 26/32 (81%)
Frame = -1 / +3
Query: 235 PHLGL*LGHQVGVSHQLNHGVFQHYEGCVSAS 140
PHLGL*LGH+VGV H+ +HGVF HY CV AS
Sbjct: 645 PHLGL*LGHEVGVLHEPSHGVFHHYV*CVRAS 740
Score = 55.1 bits (114), Expect(3) = 5e-034
Identities = 22/32 (68%), Positives = 25/32 (78%)
Frame = +3 / -2
Query: 141 LALTHPS*CWNTPWFS*CETPT**PSYKPR*G 236
LA TH +* WNTPW C+TPT *PSY+PR*G
Sbjct: 739 LARTHHT**WNTPWLGSCKTPTS*PSYRPR*G 644
Score = 54.2 bits (112), Expect(3) = 5e-069
Identities = 21/35 (60%), Positives = 25/35 (71%)
Frame = +2 / -1
Query: 503 GSAAAMDSNKGNDFQYIPFGAGRRMCPAISFATAA 607
G +AA KGN F Y+PFG GRR+CP I+FA AA
Sbjct: 383 GGSAAAMDYKGNGFLYLPFGTGRRICPGINFAIAA 279
Score = 33.1 bits (66), Expect(3) = 1e-036
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -2 / +1
Query: 606 AAVAKLMAGHILLPAPNGMYWKSF 535
AA+AK + GHIL P PNG K F
Sbjct: 280 AAMAKFIPGHILRPVPNGR*RKPF 351
Score = 28.6 bits (56), Expect(3) = 4e-041
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +3 / -2
Query: 531 RGTTSSTYRSAQGEGCAP 584
RGT SST RS +G G AP
Sbjct: 355 RGTVSSTCRSGRGGGYAP 302
Score = 27.6 bits (54), Expect(3) = 1e-028
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -1 / +3
Query: 583 GAHPSPCAERYVLEVVPLV 527
GA+P P ER V E VPL+
Sbjct: 303 GAYPPPRPERQVEETVPLI 359
Score = 27.2 bits (53), Expect(3) = 5e-034
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +1 / -3
Query: 532 GERLPVHTVRRREKDVPRHQL 594
GER P+ VR +D+PR++L
Sbjct: 354 GERFPLPAVRDGAEDMPRYKL 292
>gb|AV919647.1|AV919647 AV919647 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags6p16 3', mRNA sequence
Length = 703
Score = 172 bits (371), Expect(3) = 2e-068
Identities = 68/93 (73%), Positives = 78/93 (83%)
Frame = +2 / -2
Query: 245 INNGTEIVTEDELHSLSYLKAVVKETLRLHMPAPLLVPHLSMADCTIQGYTIPSGTRTIV 424
I G + VT+D+LH L YLKAV+KETLRLHMP PL+VPHLSM +C I GYTIPSGTRT +
Sbjct: 606 IPKGKDTVTQDDLHGLPYLKAVIKETLRLHMPGPLMVPHLSMDECIINGYTIPSGTRTFI 427
Query: 425 NSWALARDPSCWERAEEFMPERFMEGGSAAAMD 523
N++A+ RDPS WE EEFMPERFMEGGSAAAMD
Sbjct: 426 NTYAIQRDPSNWESPEEFMPERFMEGGSAAAMD 328
Score = 110 bits (235), Expect = 7e-024
Identities = 50/107 (46%), Positives = 62/107 (57%)
Frame = +1 / -1
Query: 202 PPDDQATSRGEEHHY**WNRDSHRGRAPQPILPQGSRQRDAAAPHAGSTPRAPPLHGRLH 381
PP + E H+ R H R+P+ LP+GS Q D A HAG+ AP LHGR+H
Sbjct: 649 PPRHGHATSRGEEHHTQGERHRHPRRSPRSALPKGSDQGDTPASHAGAAHGAPSLHGRMH 470
Query: 382 HTRVHDTVGNTNHRQQLGSREGPQLLGESRGVHARALHGGRQCRSHG 522
H R+HDT+G+ + Q L EG LGE RGVHA A+HG RQ HG
Sbjct: 469 HKRLHDTIGDAHFHQHLCYPEGS*QLGEPRGVHA*AVHGRRQRCRHG 329
Score = 104 bits (221), Expect(2) = 2e-034
Identities = 48/86 (55%), Positives = 51/86 (59%)
Frame = +3 / -3
Query: 267 SPRTSSTAYPTSRQSSKRRCGSTCRLHSSCPTSPWPTAPYKGTRYRREHEPSSTAGLSRG 446
SP+T ST PT RQ S+R G TCR S CP SPW A TRY R SST LSRG
Sbjct: 584 SPKTISTVCPT*RQ*SRRHSGFTCRGRSWCPISPWTNAS*TATRYHRGRALSSTPMLSRG 405
Query: 447 TPAAGREPRSSCPSASWRAAVPQPWT 524
A GR RSSC S SW+AA PWT
Sbjct: 404 ILATGRAQRSSCLSGSWKAAALPPWT 327
Score = 63.8 bits (133), Expect(3) = 2e-068
Identities = 25/33 (75%), Positives = 26/33 (78%)
Frame = +1 / -1
Query: 145 H*HILHSAGIRHGSADAKPPPDDQATSRGEEHH 243
H HI HS GIRHGSADA+PP ATSRGEEHH
Sbjct: 703 HGHINHSTGIRHGSADAEPPRHGHATSRGEEHH 605
Score = 62.0 bits (129), Expect(3) = 1e-030
Identities = 24/31 (77%), Positives = 24/31 (77%)
Frame = -3 / +3
Query: 242 WCSSPRLVAWSSGGGFASAEPWRIPAL*RMC 150
WCSSPRLVAW GG ASAEPWRIP L MC
Sbjct: 606 WCSSPRLVAWP*RGGSASAEPWRIPVLWLMC 698
Score = 61.1 bits (127), Expect(3) = 1e-030
Identities = 30/67 (44%), Positives = 39/67 (58%)
Frame = -1 / +1
Query: 466 SLPAAGVPRESPAVDDGSCSRRYRVPLYGAXXXXXXXXXEWSRHVEPQRLFDDCLEVG*A 287
+LP A +P +S VD+ + R YRV +Y A E RHV+P+ L D CL VG
Sbjct: 385 ALPVARIPLDSIGVDESARPRWYRVAVYDAFVHGEMGHHERPRHVKPECLLDHCL*VGQT 564
Query: 286 VELVLGD 266
VE+VLGD
Sbjct: 565 VEIVLGD 585
Score = 61.1 bits (127), Expect(3) = 2e-068
Identities = 23/34 (67%), Positives = 27/34 (79%)
Frame = +2 / -2
Query: 503 GSAAAMDSNKGNDFQYIPFGAGRRMCPAISFATA 604
G +AA KGNDFQY PFG+GRR+CP I+FATA
Sbjct: 351 GGSAAAMDYKGNDFQYFPFGSGRRICPGINFATA 250
Score = 61.1 bits (127), Expect(2) = 2e-034
Identities = 27/44 (61%), Positives = 32/44 (72%)
Frame = +2 / -2
Query: 146 TDTSFIVLEYAMVQLMRNPHLMTKLQAEVRSTIINNGTEIVTED 277
TDTS IVLEYAMV+LM+NP +M LQAEVRSTI + +D
Sbjct: 702 TDTSTIVLEYAMVRLMQNPRVMAMLQAEVRSTIPKGKDTVTQDD 571
Score = 57.9 bits (120), Expect(3) = 1e-023
Identities = 23/31 (74%), Positives = 24/31 (77%)
Frame = -1 / +1
Query: 241 GAPHLGL*LGHQVGVSHQLNHGVFQHYEGCV 149
GAPHLGL* GH GV HQ NHGVFQ+Y CV
Sbjct: 607 GAPHLGL*HGHDAGVLHQPNHGVFQYYG*CV 699
Score = 53.8 bits (111), Expect(3) = 1e-023
Identities = 30/63 (47%), Positives = 32/63 (50%)
Frame = -3 / +3
Query: 464 SPSSWGPSREPSC*RWFVFPTVSCTLVWCSRPWRGGARGVEPACGAAASL*RLP*GRIGC 285
SPS PS C* P VSC+ + C RPWR GA PAC A S * LP GR
Sbjct: 387 SPSC*DPSG*HRC**KCASPMVSCSRL*CIRPWRDGAP*AAPACEAGVSP*SLPLGRADR 566
Query: 284 GAR 276
G R
Sbjct: 567 GDR 575
Score = 47.3 bits (97), Expect(3) = 1e-030
Identities = 18/23 (78%), Positives = 19/23 (82%)
Frame = -2 / +2
Query: 603 AVAKLMAGHILLPAPNGMYWKSF 535
AVAKL+ GHIL P PNG YWKSF
Sbjct: 251 AVAKLIPGHILRPDPNGKYWKSF 319
Score = 35.0 bits (70), Expect(3) = 1e-023
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = -1 / +1
Query: 607 GCGRKADGGAHPSPCAERYVLEVVPLVAVHG 515
G R+ D G +P+P +R VLE++PL+ G
Sbjct: 247 GRSREVDTGTYPAPGPKRKVLEIIPLIVHGG 339
>gb|AV913934.1|AV913934 AV913934 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags23m23 5', mRNA sequence
Length = 660
Score = 172 bits (371), Expect(3) = 4e-067
Identities = 68/93 (73%), Positives = 78/93 (83%)
Frame = +2 / +2
Query: 245 INNGTEIVTEDELHSLSYLKAVVKETLRLHMPAPLLVPHLSMADCTIQGYTIPSGTRTIV 424
I G + VT+D+LH L YLKAV+KETLRLHMP PL+VPHLSM +C I GYTIPSGTRT +
Sbjct: 113 IPKGKDTVTQDDLHGLPYLKAVIKETLRLHMPGPLMVPHLSMDECIINGYTIPSGTRTFI 292
Query: 425 NSWALARDPSCWERAEEFMPERFMEGGSAAAMD 523
N++A+ RDPS WE EEFMPERFMEGGSAAAMD
Sbjct: 293 NTYAIQRDPSNWESPEEFMPERFMEGGSAAAMD 391
Score = 110 bits (235), Expect = 7e-024
Identities = 50/107 (46%), Positives = 62/107 (57%)
Frame = +1 / +1
Query: 202 PPDDQATSRGEEHHY**WNRDSHRGRAPQPILPQGSRQRDAAAPHAGSTPRAPPLHGRLH 381
PP + E H+ R H R+P+ LP+GS Q D A HAG+ AP LHGR+H
Sbjct: 70 PPRHGHATSRGEEHHTQGERHRHPRRSPRSALPKGSDQGDTPASHAGAAHGAPSLHGRMH 249
Query: 382 HTRVHDTVGNTNHRQQLGSREGPQLLGESRGVHARALHGGRQCRSHG 522
H R+HDT+G+ + Q L EG LGE RGVHA A+HG RQ HG
Sbjct: 250 HKRLHDTIGDAHFHQHLCYPEGS*QLGEPRGVHA*AVHGRRQRCRHG 390
Score = 104 bits (221), Expect(2) = 1e-033
Identities = 48/86 (55%), Positives = 51/86 (59%)
Frame = +3 / +3
Query: 267 SPRTSSTAYPTSRQSSKRRCGSTCRLHSSCPTSPWPTAPYKGTRYRREHEPSSTAGLSRG 446
SP+T ST PT RQ S+R G TCR S CP SPW A TRY R SST LSRG
Sbjct: 135 SPKTISTVCPT*RQ*SRRHSGFTCRGRSWCPISPWTNAS*TATRYHRGRALSSTPMLSRG 314
Query: 447 TPAAGREPRSSCPSASWRAAVPQPWT 524
A GR RSSC S SW+AA PWT
Sbjct: 315 ILATGRAQRSSCLSGSWKAAALPPWT 392
Score = 90.4 bits (191), Expect(2) = 2e-022
Identities = 42/71 (59%), Positives = 51/71 (71%)
Frame = -2 / -1
Query: 417 VRVPDGIVYPCMVQSAMERWGTRSGAGMWSRSVSLTTALR*DRLWSSSSVTISVPLLIMV 238
VRVPDGIV P M+ S+MERWGT SG GM SRSVSL TA R* R W SS VT+S PL +++
Sbjct: 285 VRVPDGIV*PFMMHSSMERWGTMSGPGM*SRSVSLITAFR*GRPWRSSWVTVSFPLGMVL 106
Query: 237 LLTSACSLVIR 205
L ++ + R
Sbjct: 105 LTSACSMAMTR 73
Score = 62.0 bits (129), Expect(3) = 1e-030
Identities = 25/36 (69%), Positives = 25/36 (69%)
Frame = -3 / -2
Query: 242 WCSSPRLVAWSSGGGFASAEPWRIPAL*RMCQCQLR 135
WCSSPRLVAW GG ASAEPWRIP L CQ R
Sbjct: 113 WCSSPRLVAWP*RGGSASAEPWRIPVLGXCVPCQPR 6
Score = 61.1 bits (127), Expect(3) = 4e-067
Identities = 23/34 (67%), Positives = 27/34 (79%)
Frame = +2 / +2
Query: 503 GSAAAMDSNKGNDFQYIPFGAGRRMCPAISFATA 604
G +AA KGNDFQY PFG+GRR+CP I+FATA
Sbjct: 368 GGSAAAMDYKGNDFQYFPFGSGRRICPGINFATA 469
Score = 61.1 bits (127), Expect(3) = 1e-030
Identities = 30/67 (44%), Positives = 39/67 (58%)
Frame = -1 / -3
Query: 466 SLPAAGVPRESPAVDDGSCSRRYRVPLYGAXXXXXXXXXEWSRHVEPQRLFDDCLEVG*A 287
+LP A +P +S VD+ + R YRV +Y A E RHV+P+ L D CL VG
Sbjct: 334 ALPVARIPLDSIGVDESARPRWYRVAVYDAFVHGEMGHHERPRHVKPECLLDHCL*VGQT 155
Query: 286 VELVLGD 266
VE+VLGD
Sbjct: 154 VEIVLGD 134
Score = 59.7 bits (124), Expect(3) = 4e-067
Identities = 24/36 (66%), Positives = 25/36 (69%)
Frame = +1 / +1
Query: 136 RSWH*HILHSAGIRHGSADAKPPPDDQATSRGEEHH 243
R WH S GIRHGSADA+PP ATSRGEEHH
Sbjct: 7 RGWHGTHXPSTGIRHGSADAEPPRHGHATSRGEEHH 114
Score = 58.3 bits (121), Expect(2) = 1e-033
Identities = 26/47 (55%), Positives = 32/47 (68%)
Frame = +2 / +2
Query: 137 EAGTDTSFIVLEYAMVQLMRNPHLMTKLQAEVRSTIINNGTEIVTED 277
EAGT +VLEYAMV+LM+NP +M LQAEVRSTI + +D
Sbjct: 8 EAGTXHIXLVLEYAMVRLMQNPRVMAMLQAEVRSTIPKGKDTVTQDD 148
Score = 47.3 bits (97), Expect(3) = 1e-030
Identities = 18/23 (78%), Positives = 19/23 (82%)
Frame = -2 / -1
Query: 603 AVAKLMAGHILLPAPNGMYWKSF 535
AVAKL+ GHIL P PNG YWKSF
Sbjct: 468 AVAKLIPGHILRPDPNGKYWKSF 400
Score = 35.0 bits (70), Expect(2) = 2e-022
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = -1 / -3
Query: 607 GCGRKADGGAHPSPCAERYVLEVVPLVAVHG 515
G R+ D G +P+P +R VLE++PL+ G
Sbjct: 472 GRSREVDTGTYPAPGPKRKVLEIIPLIVHGG 380
>gb|BJ464184.1|BJ464184 BJ464184 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags33d19 5', mRNA sequence
Length = 597
Score = 166 bits (356), Expect(2) = 5e-065
Identities = 65/90 (72%), Positives = 75/90 (83%)
Frame = +2 / +1
Query: 245 INNGTEIVTEDELHSLSYLKAVVKETLRLHMPAPLLVPHLSMADCTIQGYTIPSGTRTIV 424
I G + VT+D+LH L YLKAV+KETLRLHMP PL+VPHLSM +C I GYTIPSGTRT +
Sbjct: 328 IPKGKDTVTQDDLHGLPYLKAVIKETLRLHMPGPLMVPHLSMDECIINGYTIPSGTRTFI 507
Query: 425 NSWALARDPSCWERAEEFMPERFMEGGSAA 514
N++A+ RDPS WE EEFMPERFMEGGSAA
Sbjct: 508 NTYAIQRDPSNWESPEEFMPERFMEGGSAA 597
Score = 122 bits (262), Expect(2) = 3e-050
Identities = 53/74 (71%), Positives = 61/74 (82%)
Frame = +2 / +1
Query: 56 FIHVLLSLQQEYNLTRDQIKAQLVVMFEAGTDTSFIVLEYAMVQLMRNPHLMTKLQAEVR 235
FIHVLLS+QQEYNLTRD IKAQL++MFEAGTDTS IVLEYAMV+LM+NP +M LQAEVR
Sbjct: 142 FIHVLLSVQQEYNLTRDHIKAQLLIMFEAGTDTSTIVLEYAMVRLMQNPRVMAMLQAEVR 321
Query: 236 STIINNGTEIVTED 277
STI + +D
Sbjct: 322 STIPKGKDTVTQDD 363
Score = 107 bits (228), Expect = 6e-023
Identities = 48/102 (47%), Positives = 60/102 (58%)
Frame = +1 / +3
Query: 202 PPDDQATSRGEEHHY**WNRDSHRGRAPQPILPQGSRQRDAAAPHAGSTPRAPPLHGRLH 381
PP + E H+ R H R+P+ LP+GS Q D A HAG+ AP LHGR+H
Sbjct: 285 PPRHGHATSRGEEHHTQGERHRHPRRSPRSALPKGSDQGDTPASHAGAAHGAPSLHGRMH 464
Query: 382 HTRVHDTVGNTNHRQQLGSREGPQLLGESRGVHARALHGGRQ 507
H R+HDT+G+ + Q L EG LGE RGVHA A+HG RQ
Sbjct: 465 HKRLHDTIGDAHFHQHLCYPEGS*QLGEPRGVHA*AVHGRRQ 590
Score = 104 bits (222), Expect(2) = 2e-034
Identities = 49/63 (77%), Positives = 53/63 (84%)
Frame = -2 / -2
Query: 243 MVLLTSACSLVIRWGFRIS*TMAYSSTMKDVSVPASNMTTSCALI*SLVRLYSC*RESKT 64
MVLLTSACS+ + GF IS TMAYSSTM DVSVPASNM ++ ALI SLVRLYSC* ESKT
Sbjct: 329 MVLLTSACSMAMTRGFCISRTMAYSSTMVDVSVPASNMISN*ALIWSLVRLYSC*TESKT 150
Query: 63 WMK 55
WMK
Sbjct: 149 WMK 141
Score = 101 bits (216), Expect(2) = 5e-065
Identities = 43/68 (63%), Positives = 47/68 (69%)
Frame = +1 / +3
Query: 40 GGGE*FHPCLALPSARVQPDERSDQGAAGGHVRSWH*HILHSAGIRHGSADAKPPPDDQA 219
G G+ HP LA SARVQP +R Q + HV SWH HI HS GIRHGSADA+PP A
Sbjct: 126 GRGQGLHPRLAFCSARVQPHKRPYQSSVADHV*SWHGHINHSTGIRHGSADAEPPRHGHA 305
Query: 220 TSRGEEHH 243
TSRGEEHH
Sbjct: 306 TSRGEEHH 329
Score = 101 bits (215), Expect(2) = 2e-031
Identities = 41/63 (65%), Positives = 49/63 (77%)
Frame = -1 / -1
Query: 241 GAPHLGL*LGHQVGVSHQLNHGVFQHYEGCVSASFEHDHQLRLDLISRQVVLLLKGEQDM 62
GAPHLGL* GH GV HQ NHGVFQ+Y CV ASF+HD QL D++S +VVLLL +QD+
Sbjct: 327 GAPHLGL*HGHDAGVLHQPNHGVFQYYG*CVRASFKHDQQLSFDMVSCEVVLLLNRKQDV 148
Query: 61 DEI 53
DE+
Sbjct: 147 DEV 139
Score = 95.5 bits (202), Expect(2) = 3e-050
Identities = 45/80 (56%), Positives = 48/80 (60%)
Frame = +3 / +2
Query: 267 SPRTSSTAYPTSRQSSKRRCGSTCRLHSSCPTSPWPTAPYKGTRYRREHEPSSTAGLSRG 446
SP+T ST PT RQ S+R G TCR S CP SPW A TRY R SST LSRG
Sbjct: 350 SPKTISTVCPT*RQ*SRRHSGFTCRGRSWCPISPWTNAS*TATRYHRGRALSSTPMLSRG 529
Query: 447 TPAAGREPRSSCPSASWRAA 506
A GR RSSC S SW+AA
Sbjct: 530 ILATGRAQRSSCLSGSWKAA 589
Score = 61.1 bits (127), Expect(2) = 2e-034
Identities = 30/67 (44%), Positives = 39/67 (58%)
Frame = -1 / -1
Query: 466 SLPAAGVPRESPAVDDGSCSRRYRVPLYGAXXXXXXXXXEWSRHVEPQRLFDDCLEVG*A 287
+LP A +P +S VD+ + R YRV +Y A E RHV+P+ L D CL VG
Sbjct: 549 ALPVARIPLDSIGVDESARPRWYRVAVYDAFVHGEMGHHERPRHVKPECLLDHCL*VGQT 370
Query: 286 VELVLGD 266
VE+VLGD
Sbjct: 369 VEIVLGD 349
Score = 53.8 bits (111), Expect(2) = 2e-031
Identities = 30/63 (47%), Positives = 32/63 (50%)
Frame = -3 / -3
Query: 464 SPSSWGPSREPSC*RWFVFPTVSCTLVWCSRPWRGGARGVEPACGAAASL*RLP*GRIGC 285
SPS PS C* P VSC+ + C RPWR GA PAC A S * LP GR
Sbjct: 547 SPSC*DPSG*HRC**KCASPMVSCSRL*CIRPWRDGAP*AAPACEAGVSP*SLPLGRADR 368
Query: 284 GAR 276
G R
Sbjct: 367 GDR 359
>gb|AV918301.1|AV918301 AV918301 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags20j07 3', mRNA sequence
Length = 660
Score = 172 bits (371), Expect(3) = 4e-064
Identities = 68/93 (73%), Positives = 78/93 (83%)
Frame = +2 / -3
Query: 245 INNGTEIVTEDELHSLSYLKAVVKETLRLHMPAPLLVPHLSMADCTIQGYTIPSGTRTIV 424
I G + VT+D+LH L YLKAV+KETLRLHMP PL+VPHLSM +C I GYTIPSGTRT +
Sbjct: 589 IPKGKDTVTQDDLHGLPYLKAVIKETLRLHMPGPLMVPHLSMDECIINGYTIPSGTRTFI 410
Query: 425 NSWALARDPSCWERAEEFMPERFMEGGSAAAMD 523
N++A+ RDPS WE EEFMPERFMEGGSAAAMD
Sbjct: 409 NTYAIQRDPSNWESPEEFMPERFMEGGSAAAMD 311
Score = 110 bits (235), Expect = 7e-024
Identities = 50/107 (46%), Positives = 62/107 (57%)
Frame = +1 / -2
Query: 202 PPDDQATSRGEEHHY**WNRDSHRGRAPQPILPQGSRQRDAAAPHAGSTPRAPPLHGRLH 381
PP + E H+ R H R+P+ LP+GS Q D A HAG+ AP LHGR+H
Sbjct: 632 PPRHGHATSRGEEHHTQGERHRHPRRSPRSALPKGSDQGDTPASHAGAAHGAPSLHGRMH 453
Query: 382 HTRVHDTVGNTNHRQQLGSREGPQLLGESRGVHARALHGGRQCRSHG 522
H R+HDT+G+ + Q L EG LGE RGVHA A+HG RQ HG
Sbjct: 452 HKRLHDTIGDAHFHQHLCYPEGS*QLGEPRGVHA*AVHGRRQRCRHG 312
Score = 104 bits (221), Expect(2) = 3e-030
Identities = 48/86 (55%), Positives = 51/86 (59%)
Frame = +3 / -1
Query: 267 SPRTSSTAYPTSRQSSKRRCGSTCRLHSSCPTSPWPTAPYKGTRYRREHEPSSTAGLSRG 446
SP+T ST PT RQ S+R G TCR S CP SPW A TRY R SST LSRG
Sbjct: 567 SPKTISTVCPT*RQ*SRRHSGFTCRGRSWCPISPWTNAS*TATRYHRGRALSSTPMLSRG 388
Query: 447 TPAAGREPRSSCPSASWRAAVPQPWT 524
A GR RSSC S SW+AA PWT
Sbjct: 387 ILATGRAQRSSCLSGSWKAAALPPWT 310
Score = 90.4 bits (191), Expect(2) = 2e-022
Identities = 42/71 (59%), Positives = 51/71 (71%)
Frame = -2 / +3
Query: 417 VRVPDGIVYPCMVQSAMERWGTRSGAGMWSRSVSLTTALR*DRLWSSSSVTISVPLLIMV 238
VRVPDGIV P M+ S+MERWGT SG GM SRSVSL TA R* R W SS VT+S PL +++
Sbjct: 417 VRVPDGIV*PFMMHSSMERWGTMSGPGM*SRSVSLITAFR*GRPWRSSWVTVSFPLGMVL 596
Query: 237 LLTSACSLVIR 205
L ++ + R
Sbjct: 597 LTSACSMAMTR 629
Score = 61.1 bits (127), Expect(3) = 5e-028
Identities = 30/67 (44%), Positives = 39/67 (58%)
Frame = -1 / +2
Query: 466 SLPAAGVPRESPAVDDGSCSRRYRVPLYGAXXXXXXXXXEWSRHVEPQRLFDDCLEVG*A 287
+LP A +P +S VD+ + R YRV +Y A E RHV+P+ L D CL VG
Sbjct: 368 ALPVARIPLDSIGVDESARPRWYRVAVYDAFVHGEMGHHERPRHVKPECLLDHCL*VGQT 547
Query: 286 VELVLGD 266
VE+VLGD
Sbjct: 548 VEIVLGD 568
Score = 61.1 bits (127), Expect(3) = 4e-064
Identities = 23/34 (67%), Positives = 27/34 (79%)
Frame = +2 / -3
Query: 503 GSAAAMDSNKGNDFQYIPFGAGRRMCPAISFATA 604
G +AA KGNDFQY PFG+GRR+CP I+FATA
Sbjct: 334 GGSAAAMDYKGNDFQYFPFGSGRRICPGINFATA 233
Score = 53.3 bits (110), Expect(3) = 5e-028
Identities = 20/24 (83%), Positives = 20/24 (83%)
Frame = -3 / +1
Query: 242 WCSSPRLVAWSSGGGFASAEPWRI 171
WCSSPRLVAW GG ASAEPWRI
Sbjct: 589 WCSSPRLVAWP*RGGSASAEPWRI 660
Score = 49.6 bits (102), Expect(3) = 4e-064
Identities = 19/24 (79%), Positives = 20/24 (83%)
Frame = +1 / -2
Query: 172 IRHGSADAKPPPDDQATSRGEEHH 243
IRHGSADA+PP ATSRGEEHH
Sbjct: 659 IRHGSADAEPPRHGHATSRGEEHH 588
Score = 47.3 bits (97), Expect(3) = 5e-028
Identities = 18/23 (78%), Positives = 19/23 (82%)
Frame = -2 / +3
Query: 603 AVAKLMAGHILLPAPNGMYWKSF 535
AVAKL+ GHIL P PNG YWKSF
Sbjct: 234 AVAKLIPGHILRPDPNGKYWKSF 302
Score = 47.3 bits (97), Expect(2) = 3e-030
Identities = 18/24 (75%), Positives = 18/24 (75%)
Frame = +3 / -1
Query: 171 NTPWFS*CETPT**PSYKPR*GAP 242
NTPWF *C TP P YKPR*GAP
Sbjct: 660 NTPWFG*CRTPASWPCYKPR*GAP 589
Score = 35.0 bits (70), Expect(2) = 2e-022
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = -1 / +2
Query: 607 GCGRKADGGAHPSPCAERYVLEVVPLVAVHG 515
G R+ D G +P+P +R VLE++PL+ G
Sbjct: 230 GRSREVDTGTYPAPGPKRKVLEIIPLIVHGG 322
>gb|BG301188.1|BG301188 HVSMEb0019N18f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0019N18f, mRNA sequence
Length = 925
Score = 118 bits (253), Expect(3) = 9e-043
Identities = 50/77 (64%), Positives = 63/77 (81%)
Frame = +2 / +3
Query: 56 FIHVLLSLQQEYNLTRDQIKAQLVVMFEAGTDTSFIVLEYAMVQLMRNPHLMTKLQAEVR 235
+IH LLS+Q+EYNLTR+Q+KAQLV+MF AGTDTS+IV+EYAM +LM+NP LMTKLQAEVR
Sbjct: 309 YIHDLLSIQKEYNLTREQVKAQLVIMFGAGTDTSYIVMEYAMARLMQNPDLMTKLQAEVR 488
Query: 236 STIINNGTEIVTEDELH 286
S+I + +D H
Sbjct: 489 SSIPKGKHMVTEDDLNH 539
Score = 113 bits (242), Expect(4) = 9e-062
Identities = 46/60 (76%), Positives = 52/60 (86%)
Frame = +2 / +3
Query: 245 INNGTEIVTEDELHSLSYLKAVVKETLRLHMPAPLLVPHLSMADCTIQGYTIPSGTRTIV 424
I G +VTED+L+ L+YLKAV+KETLRLHMPAPLLVPHL+MADC I GYTIPSGTR IV
Sbjct: 495 IPKGKHMVTEDDLNHLAYLKAVIKETLRLHMPAPLLVPHLAMADCVINGYTIPSGTRVIV 674
Score = 96.8 bits (205), Expect(4) = 9e-062
Identities = 40/62 (64%), Positives = 44/62 (70%)
Frame = +1 / +2
Query: 58 HPCLALPSARVQPDERSDQGAAGGHVRSWH*HILHSAGIRHGSADAKPPPDDQATSRGEE 237
HP LA S RVQP + + Q + G HV SWH HI+HS GIRHGSA AKP P DQAT RGEE
Sbjct: 311 HPRLAFDSERVQPHKGAGQSSVGDHVWSWHGHIIHSDGIRHGSAHAKPRPHDQATGRGEE 490
Query: 238 HH 243
H
Sbjct: 491 *H 496
Score = 91.3 bits (193), Expect(2) = 9e-024
Identities = 48/76 (63%), Positives = 53/76 (69%)
Frame = -2 / -1
Query: 285 WSSSSVTISVPLLIMVLLTSACSLVIRWGFRIS*TMAYSSTMKDVSVPASNMTTSCALI* 106
W SS L M+LLTSACSLV+R GF +S MAYS TM DVSVPA NM T+ AL
Sbjct: 538 WLRSSSVTMCFPLGMLLLTSACSLVMRSGFCMSRAMAYSITMYDVSVPAPNMITN*ALTC 359
Query: 105 SLVRLYSC*RESKTWM 58
SLVRLYS * ESK+WM
Sbjct: 358 SLVRLYSF*IESKSWM 311
Score = 90.9 bits (192), Expect(3) = 3e-040
Identities = 43/66 (65%), Positives = 50/66 (75%)
Frame = -2 / -1
Query: 423 TMVRVPDGIVYPCMVQSAMERWGTRSGAGMWSRSVSLTTALR*DRLWSSSSVTISVPLLI 244
TM RVPDG+V P M QSAM RWGTRSGAGM SRSVSL TA R* R SSSVT+ PL +
Sbjct: 673 TMTRVPDGMV*PFMTQSAMARWGTRSGAGM*SRSVSLITAFR*ARWLRSSSVTMCFPLGM 494
Query: 243 MVLLTS 226
++L ++
Sbjct: 493 LLLTSA 476
Score = 88.6 bits (187), Expect(3) = 3e-040
Identities = 36/61 (59%), Positives = 45/61 (73%)
Frame = -1 / -3
Query: 235 PHLGL*LGHQVGVSHQLNHGVFQHYEGCVSASFEHDHQLRLDLISRQVVLLLKGEQDMDE 56
PHLGL*LGH+VGV H+ +HGVF HY CV AS +HDHQL DL+ +VVL L +Q +D
Sbjct: 488 PHLGL*LGHEVGVLHEPSHGVFHHYV*CVRASSKHDHQLSFDLLPCEVVLFLNRKQVVDV 309
Query: 55 I 53
+
Sbjct: 308 V 306
Score = 62.5 bits (130), Expect(3) = 9e-043
Identities = 28/60 (46%), Positives = 33/60 (55%)
Frame = +1 / +2
Query: 268 HRGRAPQPILPQGSRQRDAAAPHAGSTPRAPPLHGRLHHTRVHDTVGNTNHRQQLGSREG 447
HRGR+ LP+G Q D A HA + AP HGRL H R+H TV + HRQ G G
Sbjct: 518 HRGRS*PSGLPKGRDQGDTPASHACAASGAPSRHGRLRHKRLHHTVRDARHRQIAGLSRG 697
Score = 48.3 bits (99), Expect(4) = 9e-062
Identities = 18/25 (72%), Positives = 21/25 (84%)
Frame = +2 / +2
Query: 449 PSCWERAEEFMPERFMEGGSAAAMD 523
P+ WE AEE +PERFM+GG AAAMD
Sbjct: 701 PANWESAEEVLPERFMQGGMAAAMD 775
Score = 38.2 bits (77), Expect(2) = 9e-024
Identities = 22/51 (43%), Positives = 25/51 (49%)
Frame = -3 / -2
Query: 446 PSREPSC*RWFVFPTVSCTLVWCSRPWRGGARGVEPACGAAASL*RLP*GR 294
P P+ *R TV C+ + SRPWR GA AC A S * P GR
Sbjct: 696 PRDSPAI*R*RASRTVWCSRL*RSRPWRDGAPEAAQACEAGVSP*SRPLGR 544
Score = 35.0 bits (70), Expect(4) = 9e-062
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +2 / +3
Query: 548 YIPFGAGRRMCPAISFATAA 607
Y+PFG GRR CP I+ AA
Sbjct: 798 YLPFGTGRRYCPGINLRIAA 857
Score = 30.4 bits (60), Expect(3) = 9e-043
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +3 / +3
Query: 432 GLSRGTPAAGREPRSSCPSASWRAAVPQPW 521
G G+ GR R SC SAS +A +PW
Sbjct: 684 GYREGSQPTGRARRKSCLSASCKAEWLRPW 773
Score = 23.5 bits (45), Expect(3) = 3e-040
Identities = 7/10 (70%), Positives = 10/10 (100%)
Frame = -1 / -2
Query: 454 AGVPRESPAV 425
AG+PR+SPA+
Sbjct: 705 AGIPRDSPAI 676
>gb|BJ544646.1|BJ544646 BJ544646 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak33l17 5', mRNA sequence
Length = 689
Score = 139 bits (299), Expect(3) = 2e-059
Identities = 51/89 (57%), Positives = 71/89 (79%)
Frame = +2 / +2
Query: 242 IINNGTEIVTEDELHSLSYLKAVVKETLRLHMPAPLLVPHLSMADCTIQGYTIPSGTRTI 421
I+ G EI++E ++++++YL+AV+KE+LRL APLL PHL+MADC I GY +P+GTR +
Sbjct: 308 IVPQGQEIISETDMNNMTYLRAVIKESLRLRPVAPLLAPHLAMADCIIDGYIVPAGTRVV 487
Query: 422 VNSWALARDPSCWERAEEFMPERFMEGGS 508
VN+WA+ RDPS WE EEF+PERF + GS
Sbjct: 488 VNAWAIGRDPSSWEYPEEFIPERFTDEGS 574
Score = 77.6 bits (163), Expect(3) = 2e-059
Identities = 32/63 (50%), Positives = 44/63 (69%)
Frame = +2 / +2
Query: 56 FIHVLLSLQQEYNLTRDQIKAQLVVMFEAGTDTSFIVLEYAMVQLMRNPHLMTKLQAEVR 235
F+ ++LS+QQEY LTR+ +KA L +F DTS VLE+ + +LMR PH+M KLQ EVR
Sbjct: 125 FVDIMLSVQQEYALTREHMKALLTDVFFGAIDTSANVLEFTLAELMRRPHMMEKLQDEVR 304
Query: 236 STI 244
+
Sbjct: 305 GIV 313
Score = 62.0 bits (129), Expect(3) = 8e-021
Identities = 36/78 (46%), Positives = 40/78 (51%)
Frame = -2 / -3
Query: 486 SGMNXXXXXXXXXXXXXXXXLTMVRVPDGIVYPCMVQSAMERWGTRSGAGMWSRSVSLTT 307
SGMN LT RVP G +YP M+QSAM R G R GA SRS S T
Sbjct: 552 SGMNSSGYSQELGSLPMAHALTTTRVPAGTMYPSMMQSAMARCGARRGATGRSRSDSFMT 373
Query: 306 ALR*DRLWSSSSVTISVP 253
ALR L+ S S+ IS P
Sbjct: 372 ALRYVILFMSVSLIISCP 319
Score = 50.6 bits (104), Expect(3) = 2e-059
Identities = 17/25 (68%), Positives = 21/25 (84%)
Frame = +2 / +2
Query: 530 KGNDFQYIPFGAGRRMCPAISFATA 604
KGNDFQ++PFGAGRRMCP ++ A
Sbjct: 593 KGNDFQFLPFGAGRRMCPGMNLGIA 667
Score = 41.8 bits (85), Expect(3) = 8e-021
Identities = 21/51 (41%), Positives = 27/51 (52%)
Frame = -2 / -3
Query: 234 LTSACSLVIRWGFRIS*TMAYSSTMKDVSVPASNMTTSCALI*SLVRLYSC 82
LTS+CS I G +S S T+ DVS+ + A + SLVR YSC
Sbjct: 303 LTSSCSFSIMCGLLMSSAKVNSRTLADVSIAPKKTSVRRAFMCSLVRAYSC 151
Score = 33.1 bits (66), Expect(3) = 8e-021
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = -2 / -3
Query: 603 AVAKLMAGHILLPAPNGMYWKSF 535
A+ + + GHIL PAPNG KSF
Sbjct: 666 AIPRFIPGHILRPAPNGKN*KSF 598
>gb|BJ545019.1|BJ545019 BJ545019 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak42e08 5', mRNA sequence
Length = 688
Score = 139 bits (299), Expect(3) = 4e-059
Identities = 51/89 (57%), Positives = 71/89 (79%)
Frame = +2 / +2
Query: 242 IINNGTEIVTEDELHSLSYLKAVVKETLRLHMPAPLLVPHLSMADCTIQGYTIPSGTRTI 421
I+ G EI++E ++++++YL+AV+KE+LRL APLL PHL+MADC I GY +P+GTR +
Sbjct: 338 IVPQGQEIISETDMNNMTYLRAVIKESLRLRPVAPLLAPHLAMADCIIDGYIVPAGTRVV 517
Query: 422 VNSWALARDPSCWERAEEFMPERFMEGGS 508
VN+WA+ RDPS WE EEF+PERF + GS
Sbjct: 518 VNAWAIGRDPSSWEYPEEFIPERFTDEGS 604
Score = 77.6 bits (163), Expect(3) = 4e-059
Identities = 32/63 (50%), Positives = 44/63 (69%)
Frame = +2 / +2
Query: 56 FIHVLLSLQQEYNLTRDQIKAQLVVMFEAGTDTSFIVLEYAMVQLMRNPHLMTKLQAEVR 235
F+ ++LS+QQEY LTR+ +KA L +F DTS VLE+ + +LMR PH+M KLQ EVR
Sbjct: 155 FVDIMLSVQQEYALTREHMKALLTDVFFGAIDTSANVLEFTLAELMRRPHMMEKLQDEVR 334
Query: 236 STI 244
+
Sbjct: 335 GIV 343
Score = 49.2 bits (101), Expect(3) = 4e-059
Identities = 16/21 (76%), Positives = 20/21 (95%)
Frame = +2 / +2
Query: 530 KGNDFQYIPFGAGRRMCPAIS 592
KGNDFQ++PFGAGRRMCP ++
Sbjct: 623 KGNDFQFLPFGAGRRMCPGMN 685
>gb|BJ453643.1|BJ453643 BJ453643 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak43p03 5', mRNA sequence
Length = 589
Score = 171 bits (367), Expect(3) = 8e-059
Identities = 68/93 (73%), Positives = 76/93 (81%)
Frame = +2 / +2
Query: 245 INNGTEIVTEDELHSLSYLKAVVKETLRLHMPAPLLVPHLSMADCTIQGYTIPSGTRTIV 424
I G E+VTE +L S +YLKAV+KETLRLHMP PLLVPHLSMA+C + GY IPSG R I+
Sbjct: 56 ITKGKEMVTEADLDSXAYLKAVIKETLRLHMPGPLLVPHLSMAECNVNGYIIPSGIRVII 235
Query: 425 NSWALARDPSCWERAEEFMPERFMEGGSAAAMD 523
NSWALARDP WE A+EFMPERFME GSAA MD
Sbjct: 236 NSWALARDPGSWEHADEFMPERFMECGSAATMD 334
Score = 99.6 bits (211), Expect(3) = 2e-032
Identities = 46/88 (52%), Positives = 56/88 (63%)
Frame = -2 / -2
Query: 489 RSGMNXXXXXXXXXXXXXXXXLTMVRVPDGIVYPCMVQSAMERWGTRSGAGMWSRSVSLT 310
RSGMN L M R+PDGI+YP + SAMERWGTRSG G+WS SVSL
Sbjct: 300 RSGMNSSACSQLPGSLARAQLLMMTRIPDGIMYPFTLHSAMERWGTRSGPGIWSLSVSLI 121
Query: 309 TALR*DRLWSSSSVTISVPLLIMVLLTS 226
TA R L S+SVTIS PL+I++L ++
Sbjct: 120 TAFRYAXLSRSASVTISFPLVIVLLTSA 37
Score = 82.6 bits (174), Expect(2) = 2e-022
Identities = 38/95 (40%), Positives = 47/95 (49%)
Frame = +3 / +3
Query: 270 PRTSSTAYPTSRQSSKRRCGSTCRLHSSCPTSPWPTAPYKGTRYRREHEPSSTAGLSRGT 449
P+ S T R+ SKR GS C HS PTSPWP+ T Y +E+ SS GL +GT
Sbjct: 81 PKLISIVXHT*RR*SKRHSGSICLGHSXYPTSPWPSVT*MDTLYHQEYVSSSIVGLLQGT 260
Query: 450 PAAGREPRSSCPSASWRAAVPQPWTATRGTTSSTY 554
G SSC S W PQ WT T+ + +
Sbjct: 261 LVVGSMQMSSCLSGLWNVVAPQLWTIRETTSHTCH 365
Score = 53.8 bits (111), Expect(3) = 8e-059
Identities = 20/32 (62%), Positives = 24/32 (75%)
Frame = +2 / +2
Query: 509 AAAMDSNKGNDFQYIPFGAGRRMCPAISFATA 604
+AA KGNDF Y+PFG GRR+CP I+FA A
Sbjct: 317 SAATMDYKGNDFSYLPFGTGRRICPGINFAIA 412
Score = 42.3 bits (86), Expect(2) = 2e-022
Identities = 18/30 (60%), Positives = 20/30 (66%)
Frame = +2 / +2
Query: 188 LMRNPHLMTKLQAEVRSTIINNGTEIVTED 277
LM+NPHLM KLQAEVRSTI + D
Sbjct: 2 LMQNPHLMNKLQAEVRSTITKGKEMVTEAD 91
Score = 40.9 bits (83), Expect(3) = 8e-059
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = +1 / +1
Query: 187 ADAKPPPDDQATSRGEEHH 243
A AKPPP +QATSRGEEH+
Sbjct: 1 AHAKPPPHEQATSRGEEHY 57
Score = 39.6 bits (80), Expect(3) = 2e-032
Identities = 15/21 (71%), Positives = 19/21 (90%)
Frame = -2 / -2
Query: 249 LIMVLLTSACSLVIRWGFRIS 187
L++VLLTSACSL +RWGF +S
Sbjct: 63 LVIVLLTSACSLFMRWGFCMS 1
Score = 37.7 bits (76), Expect(3) = 2e-032
Identities = 15/23 (65%), Positives = 17/23 (73%)
Frame = -2 / -2
Query: 603 AVAKLMAGHILLPAPNGMYWKSF 535
A+AKL+ G IL P PNG Y KSF
Sbjct: 411 AIAKLIPGQILRPVPNGKYEKSF 343
>gb|BM816874.1|BM816874 HB105E09_SK.ab1 HB Hordeum vulgare subsp. vulgare cDNA clone
HB105E09_SK.ab1 similar to Steroid
17-alpha-monooxygenase,Unspecific monooxygenase, mRNA
sequence
Length = 884
Score = 139 bits (298), Expect(3) = 2e-057
Identities = 52/95 (54%), Positives = 74/95 (77%)
Frame = +2 / +2
Query: 239 TIINNGTEIVTEDELHSLSYLKAVVKETLRLHMPAPLLVPHLSMADCTIQGYTIPSGTRT 418
+I+ +G E+VTE ++ ++YL+AV+KE+LRLH APLLVPHL+M D I GY +P+GT
Sbjct: 230 SIVPSGQEVVTEADISKMTYLRAVIKESLRLHPVAPLLVPHLAMIDGNIDGYMVPAGTHV 409
Query: 419 IVNSWALARDPSCWERAEEFMPERFMEGGSAAAMD 523
++N WA+ RD S WE AEEF+PERF++ GSAA ++
Sbjct: 410 LINVWAIGRDSSYWEEAEEFIPERFLDEGSAAGVN 514
Score = 68.9 bits (144), Expect(3) = 2e-057
Identities = 29/63 (46%), Positives = 44/63 (69%)
Frame = +2 / +2
Query: 56 FIHVLLSLQQEYNLTRDQIKAQLVVMFEAGTDTSFIVLEYAMVQLMRNPHLMTKLQAEVR 235
F+ +LLS+Q EY LT++ +KA L +F T+TS LE+ + +L+R+P L+ KLQ EVR
Sbjct: 50 FVDILLSVQMEYGLTKEDMKALLTDVFFGSTETSSNTLEFTLAELVRSPCLIGKLQDEVR 229
Query: 236 STI 244
S +
Sbjct: 230 SIV 238
Score = 52.4 bits (108), Expect(3) = 2e-057
Identities = 20/32 (62%), Positives = 25/32 (78%)
Frame = +2 / +2
Query: 509 AAAMDSNKGNDFQYIPFGAGRRMCPAISFATA 604
+AA + KGNDFQ++PFGAGRRMCP I+ A
Sbjct: 497 SAAGVNFKGNDFQFLPFGAGRRMCPGINLGIA 592
>gb|AV918176.1|AV918176 AV918176 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags20c01 3', mRNA sequence
Length = 655
Score = 172 bits (371), Expect(3) = 5e-057
Identities = 68/93 (73%), Positives = 78/93 (83%)
Frame = +2 / -2
Query: 245 INNGTEIVTEDELHSLSYLKAVVKETLRLHMPAPLLVPHLSMADCTIQGYTIPSGTRTIV 424
I G + VT+D+LH L YLKAV+KETLRLHMP PL+VPHLSM +C I GYTIPSGTRT +
Sbjct: 624 IPKGKDTVTQDDLHGLPYLKAVIKETLRLHMPGPLMVPHLSMDECIINGYTIPSGTRTFI 445
Query: 425 NSWALARDPSCWERAEEFMPERFMEGGSAAAMD 523
N++A+ RDPS WE EEFMPERFMEGGSAAAMD
Sbjct: 444 NTYAIQRDPSNWESPEEFMPERFMEGGSAAAMD 346
Score = 109 bits (232), Expect(2) = 4e-025
Identities = 48/96 (50%), Positives = 59/96 (61%)
Frame = +1 / -1
Query: 235 EHHY**WNRDSHRGRAPQPILPQGSRQRDAAAPHAGSTPRAPPLHGRLHHTRVHDTVGNT 414
E H+ R H R+P+ LP+GS Q D A HAG+ AP LHGR+HH R+HDT+G+
Sbjct: 634 EEHHTQGERHRHPRRSPRSALPKGSDQGDTPASHAGAAHGAPSLHGRMHHKRLHDTIGDA 455
Query: 415 NHRQQLGSREGPQLLGESRGVHARALHGGRQCRSHG 522
+ Q L EG LGE RGVHA A+HG RQ HG
Sbjct: 454 HFHQHLCYPEGS*QLGEPRGVHA*AVHGRRQRCRHG 347
Score = 104 bits (221), Expect(2) = 6e-023
Identities = 48/86 (55%), Positives = 51/86 (59%)
Frame = +3 / -3
Query: 267 SPRTSSTAYPTSRQSSKRRCGSTCRLHSSCPTSPWPTAPYKGTRYRREHEPSSTAGLSRG 446
SP+T ST PT RQ S+R G TCR S CP SPW A TRY R SST LSRG
Sbjct: 602 SPKTISTVCPT*RQ*SRRHSGFTCRGRSWCPISPWTNAS*TATRYHRGRALSSTPMLSRG 423
Query: 447 TPAAGREPRSSCPSASWRAAVPQPWT 524
A GR RSSC S SW+AA PWT
Sbjct: 422 ILATGRAQRSSCLSGSWKAAALPPWT 345
Score = 89.5 bits (189), Expect(3) = 2e-027
Identities = 41/64 (64%), Positives = 49/64 (76%)
Frame = -2 / +2
Query: 417 VRVPDGIVYPCMVQSAMERWGTRSGAGMWSRSVSLTTALR*DRLWSSSSVTISVPLLIMV 238
VRVPDGIV P M+ S+MERWGT SG GM SRSVSL TA R* R W SS VT+S PL +++
Sbjct: 452 VRVPDGIV*PFMMHSSMERWGTMSGPGM*SRSVSLITAFR*GRPWRSSWVTVSFPLGMVL 631
Query: 237 LLTS 226
L ++
Sbjct: 632 LTSA 643
Score = 61.1 bits (127), Expect(3) = 5e-057
Identities = 23/34 (67%), Positives = 27/34 (79%)
Frame = +2 / -2
Query: 503 GSAAAMDSNKGNDFQYIPFGAGRRMCPAISFATA 604
G +AA KGNDFQY PFG+GRR+CP I+FATA
Sbjct: 369 GGSAAAMDYKGNDFQYFPFGSGRRICPGINFATA 268
Score = 47.3 bits (97), Expect(3) = 2e-027
Identities = 18/23 (78%), Positives = 19/23 (82%)
Frame = -2 / +2
Query: 603 AVAKLMAGHILLPAPNGMYWKSF 535
AVAKL+ GHIL P PNG YWKSF
Sbjct: 269 AVAKLIPGHILRPDPNGKYWKSF 337
Score = 25.8 bits (50), Expect(3) = 5e-057
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +1 / -1
Query: 217 ATSRGEEHH 243
ATSRGEEHH
Sbjct: 649 ATSRGEEHH 623
Score = 24.9 bits (48), Expect(2) = 4e-025
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +3 / -3
Query: 213 PSYKPR*GAP 242
P YKPR*GAP
Sbjct: 653 PCYKPR*GAP 624
Score = 22.6 bits (43), Expect(3) = 2e-027
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -1 / +1
Query: 241 GAPHLGL*LG 212
GAPHLGL* G
Sbjct: 625 GAPHLGL*HG 654
Score = 22.6 bits (43), Expect(2) = 6e-023
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +2 / -2
Query: 218 LQAEVRSTIINNGTEIVTED 277
LQAEVRSTI + +D
Sbjct: 648 LQAEVRSTIPKGKDTVTQDD 589
>gb|AV936726.1|AV936726 AV936726 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal5k12 3', mRNA sequence
Length = 774
Score = 143 bits (306), Expect(3) = 6e-056
Identities = 52/89 (58%), Positives = 72/89 (80%)
Frame = +2 / -3
Query: 242 IINNGTEIVTEDELHSLSYLKAVVKETLRLHMPAPLLVPHLSMADCTIQGYTIPSGTRTI 421
I+ G EI++E ++++++YL+AV+KE+LRLH APLL PHL+MADC I GY +P+GTR +
Sbjct: 619 ILPQGQEIISETDMNNMTYLRAVIKESLRLHPVAPLLAPHLAMADCIIDGYIVPAGTRVV 440
Query: 422 VNSWALARDPSCWERAEEFMPERFMEGGS 508
VN+WA+ RDPS WE EEF+PERF + GS
Sbjct: 439 VNAWAIGRDPSSWEYPEEFIPERFTDEGS 353
Score = 62.5 bits (130), Expect(3) = 6e-056
Identities = 27/53 (50%), Positives = 35/53 (66%)
Frame = +2 / -3
Query: 86 EYNLTRDQIKAQLVVMFEAGTDTSFIVLEYAMVQLMRNPHLMTKLQAEVRSTI 244
EY LTR+ +KA L +F DTS VLE+ + +LMR PH+M KLQ EVR +
Sbjct: 772 EYALTREHMKALLTDVFFGAIDTSANVLEFTLAELMRRPHMMEKLQDEVRGIL 614
Score = 50.6 bits (104), Expect(3) = 6e-056
Identities = 17/25 (68%), Positives = 21/25 (84%)
Frame = +2 / -3
Query: 530 KGNDFQYIPFGAGRRMCPAISFATA 604
KGNDFQ++PFGAGRRMCP ++ A
Sbjct: 334 KGNDFQFLPFGAGRRMCPGMNLGIA 260
>gb|BJ546119.1|BJ546119 BJ546119 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak33l17 3', mRNA sequence
Length = 689
Score = 139 bits (299), Expect(3) = 8e-056
Identities = 51/89 (57%), Positives = 71/89 (79%)
Frame = +2 / -1
Query: 242 IINNGTEIVTEDELHSLSYLKAVVKETLRLHMPAPLLVPHLSMADCTIQGYTIPSGTRTI 421
I+ G EI++E ++++++YL+AV+KE+LRL APLL PHL+MADC I GY +P+GTR +
Sbjct: 533 IVPQGQEIISETDMNNMTYLRAVIKESLRLRPVAPLLAPHLAMADCIIDGYIVPAGTRVV 354
Query: 422 VNSWALARDPSCWERAEEFMPERFMEGGS 508
VN+WA+ RDPS WE EEF+PERF + GS
Sbjct: 353 VNAWAIGRDPSSWEYPEEFIPERFTDEGS 267
Score = 65.2 bits (136), Expect(3) = 8e-056
Identities = 28/54 (51%), Positives = 36/54 (66%)
Frame = +2 / -1
Query: 83 QEYNLTRDQIKAQLVVMFEAGTDTSFIVLEYAMVQLMRNPHLMTKLQAEVRSTI 244
QEY LTR+ +KA L +F DTS VLE+ + +LMR PH+M KLQ EVR +
Sbjct: 689 QEYALTREHMKALLTDVFFGAIDTSANVLEFTLAELMRRPHMMEKLQDEVRGIV 528
Score = 50.6 bits (104), Expect(3) = 8e-056
Identities = 17/25 (68%), Positives = 21/25 (84%)
Frame = +2 / -1
Query: 530 KGNDFQYIPFGAGRRMCPAISFATA 604
KGNDFQ++PFGAGRRMCP ++ A
Sbjct: 248 KGNDFQFLPFGAGRRMCPGMNLGIA 174
>gb|BJ463196.1|BJ463196 BJ463196 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags26d07 5', mRNA sequence
Length = 578
Score = 137 bits (293), Expect(2) = 7e-055
Identities = 56/75 (74%), Positives = 63/75 (84%)
Frame = +2 / +2
Query: 245 INNGTEIVTEDELHSLSYLKAVVKETLRLHMPAPLLVPHLSMADCTIQGYTIPSGTRTIV 424
I G +V ED+L+ L+YLKAV+KETLRLHMPAPLLVPHL+MADC I GYTIPSGTR IV
Sbjct: 353 IPKGKHMVIEDDLNHLAYLKAVIKETLRLHMPAPLLVPHLAMADCVINGYTIPSGTRVIV 532
Query: 425 NSWALARDPSCWERA 469
NS A+ARDPS WE A
Sbjct: 533 NSRAIARDPSSWESA 577
Score = 120 bits (256), Expect(2) = 3e-045
Identities = 50/77 (64%), Positives = 64/77 (83%)
Frame = +2 / +2
Query: 56 FIHVLLSLQQEYNLTRDQIKAQLVVMFEAGTDTSFIVLEYAMVQLMRNPHLMTKLQAEVR 235
+IH LLS+Q+EYNLTR+Q+KAQLV+MF AGTDTS+IV+EYAM +LM+NP LMTKLQAEVR
Sbjct: 167 YIHDLLSIQKEYNLTREQVKAQLVIMFGAGTDTSYIVMEYAMARLMQNPDLMTKLQAEVR 346
Query: 236 STIINNGTEIVTEDELH 286
S+I ++ +D H
Sbjct: 347 SSIPKGKHMVIEDDLNH 397
Score = 96.8 bits (205), Expect(2) = 7e-055
Identities = 40/62 (64%), Positives = 44/62 (70%)
Frame = +1 / +1
Query: 58 HPCLALPSARVQPDERSDQGAAGGHVRSWH*HILHSAGIRHGSADAKPPPDDQATSRGEE 237
HP LA S RVQP + + Q + G HV SWH HI+HS GIRHGSA AKP P DQAT RGEE
Sbjct: 169 HPRLAFDSERVQPHKGAGQSSVGDHVWSWHGHIIHSDGIRHGSAHAKPRPHDQATGRGEE 348
Query: 238 HH 243
H
Sbjct: 349 *H 354
Score = 90.9 bits (192), Expect(2) = 8e-028
Identities = 48/76 (63%), Positives = 53/76 (69%)
Frame = -2 / -3
Query: 285 WSSSSVTISVPLLIMVLLTSACSLVIRWGFRIS*TMAYSSTMKDVSVPASNMTTSCALI* 106
W SS L M+LLTSACSLV+R GF +S MAYS TM DVSVPA NM T+ AL
Sbjct: 396 WLRSSSMTMCFPLGMLLLTSACSLVMRSGFCMSRAMAYSITMYDVSVPAPNMITN*ALTC 217
Query: 105 SLVRLYSC*RESKTWM 58
SLVRLYS * ESK+WM
Sbjct: 216 SLVRLYSF*IESKSWM 169
Score = 89.5 bits (189), Expect(2) = 3e-038
Identities = 42/66 (63%), Positives = 50/66 (75%)
Frame = -2 / -3
Query: 423 TMVRVPDGIVYPCMVQSAMERWGTRSGAGMWSRSVSLTTALR*DRLWSSSSVTISVPLLI 244
TM RVPDG+V P M QSAM RWGTRSGAGM SRSVSL TA R* R SSS+T+ PL +
Sbjct: 531 TMTRVPDGMV*PFMTQSAMARWGTRSGAGM*SRSVSLMTAFR*ARWLRSSSMTMCFPLGM 352
Query: 243 MVLLTS 226
++L ++
Sbjct: 351 LLLTSA 334
Score = 88.6 bits (187), Expect(2) = 3e-038
Identities = 36/61 (59%), Positives = 45/61 (73%)
Frame = -1 / -2
Query: 235 PHLGL*LGHQVGVSHQLNHGVFQHYEGCVSASFEHDHQLRLDLISRQVVLLLKGEQDMDE 56
PHLGL*LGH+VGV H+ +HGVF HY CV AS +HDHQL DL+ +VVL L +Q +D
Sbjct: 346 PHLGL*LGHEVGVLHEPSHGVFHHYV*CVRASSKHDHQLSFDLLPCEVVLFLNRKQVVDV 167
Query: 55 I 53
+
Sbjct: 166 V 164
Score = 81.7 bits (172), Expect(2) = 3e-045
Identities = 37/64 (57%), Positives = 39/64 (60%)
Frame = +3 / +3
Query: 273 RTSSTAYPTSRQSSKRRCGSTCRLHSSCPTSPWPTAPYKGTRYRREHEPSSTAGLSRGTP 452
RT T +PT R SS+R G TC CP SPWPTA T YR H SS AGLSRG P
Sbjct: 381 RTILTIWPT*RPSSRRHSGFTCLRRFWCPISPWPTAS*TATPYRPGHASSSIAGLSRGIP 560
Query: 453 AAGR 464
AAGR
Sbjct: 561 AAGR 572
Score = 77.1 bits (162), Expect(2) = 1e-024
Identities = 35/66 (53%), Positives = 40/66 (60%)
Frame = +1 / +1
Query: 268 HRGRAPQPILPQGSRQRDAAAPHAGSTPRAPPLHGRLHHTRVHDTVGNTNHRQQLGSREG 447
HRGR+ LP+G Q D A HA + AP HGRL H R+H TV +T HRQ G REG
Sbjct: 376 HRGRS*PSGLPKGRHQGDTPASHACAASGAPSRHGRLRHKRLHHTVRDTRHRQ*PGYREG 555
Query: 448 PQLLGE 465
Q LGE
Sbjct: 556 SQQLGE 573
Score = 72.5 bits (152), Expect(2) = 1e-025
Identities = 32/69 (46%), Positives = 45/69 (65%)
Frame = -1 / -2
Query: 466 SLPAAGVPRESPAVDDGSCSRRYRVPLYGAXXXXXXXXXEWSRHVEPQRLFDDCLEVG*A 287
+LPAAG+PR+SPA+DD +C RY V +Y A + RHV+P+ L DD L VG
Sbjct: 574 ALPAAGIPRDSPAIDDDACPGRYGVAVYDAVGHGEMGHQKRRRHVKPECLLDDGL*VGQM 395
Query: 286 VELVLGDYL 260
V++VL D++
Sbjct: 394 VKIVLYDHV 368
Score = 63.4 bits (132), Expect(2) = 1e-025
Identities = 26/35 (74%), Positives = 28/35 (80%)
Frame = -3 / -1
Query: 236 SSPRLVAWSSGGGFASAEPWRIPAL*RMCQCQLRT 132
SSPR VAWS G GFA AEPWRIP+L MC CQL+T
Sbjct: 347 SSPRPVAWS*GRGFA*AEPWRIPSLCMMCPCQLQT 243
Score = 55.1 bits (114), Expect(2) = 1e-024
Identities = 22/32 (68%), Positives = 25/32 (78%)
Frame = +3 / +3
Query: 141 LALTHPS*CWNTPWFS*CETPT**PSYKPR*G 236
LA TH +* WNTPW C+TPT *PSY+PR*G
Sbjct: 252 LARTHHT**WNTPWLGSCKTPTS*PSYRPR*G 347
Score = 52.4 bits (108), Expect(2) = 8e-028
Identities = 29/57 (50%), Positives = 31/57 (54%)
Frame = -3 / -1
Query: 464 SPSSWGPSREPSC*RWFVFPTVSCTLVWCSRPWRGGARGVEPACGAAASL*RLP*GR 294
SPS W PSR P *R V TV C+ + SRPWR GA AC A S * P GR
Sbjct: 572 SPSCWDPSR*PGY*R*RVSRTVWCSRL*RSRPWRDGAPEAAQACEAGVSP**RPLGR 402
>gb|AV922405.1|AV922405 AV922405 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags18b09 3', mRNA sequence
Length = 618
Score = 171 bits (369), Expect(2) = 1e-054
Identities = 67/90 (74%), Positives = 77/90 (85%)
Frame = +2 / -3
Query: 254 GTEIVTEDELHSLSYLKAVVKETLRLHMPAPLLVPHLSMADCTIQGYTIPSGTRTIVNSW 433
G + VT+D+LH L YLKAV+KETLRLHMP PL+VPHLSM +C I GYTIPSGTRT +N++
Sbjct: 616 GKDTVTQDDLHGLPYLKAVIKETLRLHMPGPLMVPHLSMDECIINGYTIPSGTRTFINTY 437
Query: 434 ALARDPSCWERAEEFMPERFMEGGSAAAMD 523
A+ RDPS WE EEFMPERFMEGGSAAAMD
Sbjct: 436 AIQRDPSNWESPEEFMPERFMEGGSAAAMD 347
Score = 106 bits (227), Expect = 8e-023
Identities = 46/88 (52%), Positives = 56/88 (63%)
Frame = +1 / -2
Query: 259 RDSHRGRAPQPILPQGSRQRDAAAPHAGSTPRAPPLHGRLHHTRVHDTVGNTNHRQQLGS 438
R H R+P+ LP+GS Q D A HAG+ AP LHGR+HH R+HDT+G+ + Q L
Sbjct: 611 RHRHPRRSPRSALPKGSDQGDTPASHAGAAHGAPSLHGRMHHKRLHDTIGDAHFHQHLCY 432
Query: 439 REGPQLLGESRGVHARALHGGRQCRSHG 522
EG LGE RGVHA A+HG RQ HG
Sbjct: 431 PEGS*QLGEPRGVHA*AVHGRRQRCRHG 348
Score = 104 bits (221), Expect = 6e-022
Identities = 48/86 (55%), Positives = 51/86 (59%)
Frame = +3 / -1
Query: 267 SPRTSSTAYPTSRQSSKRRCGSTCRLHSSCPTSPWPTAPYKGTRYRREHEPSSTAGLSRG 446
SP+T ST PT RQ S+R G TCR S CP SPW A TRY R SST LSRG
Sbjct: 603 SPKTISTVCPT*RQ*SRRHSGFTCRGRSWCPISPWTNAS*TATRYHRGRALSSTPMLSRG 424
Query: 447 TPAAGREPRSSCPSASWRAAVPQPWT 524
A GR RSSC S SW+AA PWT
Sbjct: 423 ILATGRAQRSSCLSGSWKAAALPPWT 346
Score = 85.8 bits (181), Expect(2) = 8e-025
Identities = 39/55 (70%), Positives = 42/55 (76%)
Frame = -2 / +3
Query: 417 VRVPDGIVYPCMVQSAMERWGTRSGAGMWSRSVSLTTALR*DRLWSSSSVTISVP 253
VRVPDGIV P M+ S+MERWGT SG GM SRSVSL TA R* R W SS VT+S P
Sbjct: 453 VRVPDGIV*PFMMHSSMERWGTMSGPGM*SRSVSLITAFR*GRPWRSSWVTVSFP 617
Score = 61.1 bits (127), Expect(2) = 1e-054
Identities = 23/34 (67%), Positives = 27/34 (79%)
Frame = +2 / -3
Query: 503 GSAAAMDSNKGNDFQYIPFGAGRRMCPAISFATA 604
G +AA KGNDFQY PFG+GRR+CP I+FATA
Sbjct: 370 GGSAAAMDYKGNDFQYFPFGSGRRICPGINFATA 269
Score = 47.3 bits (97), Expect(2) = 8e-025
Identities = 18/23 (78%), Positives = 19/23 (82%)
Frame = -2 / +3
Query: 603 AVAKLMAGHILLPAPNGMYWKSF 535
AVAKL+ GHIL P PNG YWKSF
Sbjct: 270 AVAKLIPGHILRPDPNGKYWKSF 338
>gb|AV930421.1|AV930421 AV930421 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd22h15 3', mRNA sequence
Length = 640
Score = 143 bits (306), Expect(3) = 2e-051
Identities = 52/89 (58%), Positives = 72/89 (80%)
Frame = +2 / -1
Query: 242 IINNGTEIVTEDELHSLSYLKAVVKETLRLHMPAPLLVPHLSMADCTIQGYTIPSGTRTI 421
I+ G EI++E ++++++YL+AV+KE+LRLH APLL PHL+MADC I GY +P+GTR +
Sbjct: 523 ILPQGQEIISETDMNNMTYLRAVIKESLRLHPVAPLLAPHLAMADCIIDGYIVPAGTRVV 344
Query: 422 VNSWALARDPSCWERAEEFMPERFMEGGS 508
VN+WA+ RDPS WE EEF+PERF + GS
Sbjct: 343 VNAWAIGRDPSSWEYPEEFIPERFTDEGS 257
Score = 50.6 bits (104), Expect(3) = 2e-051
Identities = 17/25 (68%), Positives = 21/25 (84%)
Frame = +2 / -1
Query: 530 KGNDFQYIPFGAGRRMCPAISFATA 604
KGNDFQ++PFGAGRRMCP ++ A
Sbjct: 238 KGNDFQFLPFGAGRRMCPGMNLGIA 164
Score = 46.9 bits (96), Expect(3) = 2e-051
Identities = 20/41 (48%), Positives = 26/41 (63%)
Frame = +2 / -1
Query: 122 LVVMFEAGTDTSFIVLEYAMVQLMRNPHLMTKLQAEVRSTI 244
L +F DTS VLE+ + +LMR PH+M KLQ EVR +
Sbjct: 640 LTDVFFGAIDTSANVLEFTLAELMRRPHMMEKLQDEVRGIL 518
>gb|AV936356.1|AV936356 AV936356 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal11a15 3', mRNA sequence
Length = 683
Score = 143 bits (306), Expect(3) = 8e-051
Identities = 52/89 (58%), Positives = 72/89 (80%)
Frame = +2 / -2
Query: 242 IINNGTEIVTEDELHSLSYLKAVVKETLRLHMPAPLLVPHLSMADCTIQGYTIPSGTRTI 421
I+ G EI++E ++++++YL+AV+KE+LRLH APLL PHL+MADC I GY +P+GTR +
Sbjct: 589 ILPQGQEIISETDMNNMTYLRAVIKESLRLHPVAPLLAPHLAMADCIIDGYIVPAGTRVV 410
Query: 422 VNSWALARDPSCWERAEEFMPERFMEGGS 508
VN+WA+ RDPS WE EEF+PERF + GS
Sbjct: 409 VNAWAIGRDPSSWEYPEEFIPERFTDEGS 323
Score = 50.6 bits (104), Expect(3) = 8e-051
Identities = 17/25 (68%), Positives = 21/25 (84%)
Frame = +2 / -2
Query: 530 KGNDFQYIPFGAGRRMCPAISFATA 604
KGNDFQ++PFGAGRRMCP ++ A
Sbjct: 304 KGNDFQFLPFGAGRRMCPGMNLGIA 230
Score = 45.1 bits (92), Expect(3) = 8e-051
Identities = 18/32 (56%), Positives = 23/32 (71%)
Frame = +2 / -2
Query: 149 DTSFIVLEYAMVQLMRNPHLMTKLQAEVRSTI 244
DTS VLE+ + +LMR PH+M KLQ EVR +
Sbjct: 679 DTSANVLEFTLAELMRRPHMMEKLQDEVRGIL 584
>gb|AV934105.1|AV934105 AV934105 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal11a15 5', mRNA sequence
Length = 544
Score = 143 bits (306), Expect(2) = 9e-051
Identities = 52/89 (58%), Positives = 72/89 (80%)
Frame = +2 / +1
Query: 242 IINNGTEIVTEDELHSLSYLKAVVKETLRLHMPAPLLVPHLSMADCTIQGYTIPSGTRTI 421
I+ G EI++E ++++++YL+AV+KE+LRLH APLL PHL+MADC I GY +P+GTR +
Sbjct: 244 ILPQGQEIISETDMNNMTYLRAVIKESLRLHPVAPLLAPHLAMADCIIDGYIVPAGTRVV 423
Query: 422 VNSWALARDPSCWERAEEFMPERFMEGGS 508
VN+WA+ RDPS WE EEF+PERF + GS
Sbjct: 424 VNAWAIGRDPSSWEYPEEFIPERFTDEGS 510
Score = 77.1 bits (162), Expect(2) = 9e-051
Identities = 32/63 (50%), Positives = 44/63 (69%)
Frame = +2 / +1
Query: 56 FIHVLLSLQQEYNLTRDQIKAQLVVMFEAGTDTSFIVLEYAMVQLMRNPHLMTKLQAEVR 235
F+ ++LS+QQEY LTR+ +KA L +F DTS VLE+ + +LMR PH+M KLQ EVR
Sbjct: 61 FVDIMLSVQQEYALTREHMKALLTDVFFGAIDTSANVLEFTLAELMRRPHMMEKLQDEVR 240
Query: 236 STI 244
+
Sbjct: 241 GIL 249
>gb|BJ452936.1|BJ452936 BJ452936 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak40p23 5', mRNA sequence
Length = 502
Score = 166 bits (357), Expect(2) = 9e-051
Identities = 67/93 (72%), Positives = 74/93 (79%)
Frame = +2 / +1
Query: 245 INNGTEIVTEDELHSLSYLKAVVKETLRLHMPAPLLVPHLSMADCTIQGYTIPSGTRTIV 424
I G E+VTE +L SL+YLKA +KETLRLHMP PLLVPHLSMA+C + GY IPSG R I+
Sbjct: 13 ITKGKEMVTEADLDSLAYLKAXIKETLRLHMPGPLLVPHLSMAECNVNGYIIPSGIRVII 192
Query: 425 NSWALARDPSCWERAEEFMPERFMEGGSAAAMD 523
NSWALARDP WE A EFMPER ME GSAA MD
Sbjct: 193 NSWALARDPGSWEHAXEFMPERXMECGSAATMD 291
Score = 97.7 bits (207), Expect(2) = 2e-025
Identities = 46/85 (54%), Positives = 55/85 (64%)
Frame = -2 / -3
Query: 489 RSGMNXXXXXXXXXXXXXXXXLTMVRVPDGIVYPCMVQSAMERWGTRSGAGMWSRSVSLT 310
RSGMN L M R+PDGI+YP + SAMERWGTRSG G+WS SVSL
Sbjct: 257 RSGMNSXACSQLPGSLARAQLLMMTRIPDGIMYPFTLHSAMERWGTRSGPGIWSLSVSLI 78
Query: 309 TALR*DRLWSSSSVTISVPLLIMVL 235
A R +L S+SVTIS PL+I++L
Sbjct: 77 XAFRYAKLSRSASVTISFPLVIVLL 3
Score = 53.8 bits (111), Expect(2) = 9e-051
Identities = 20/32 (62%), Positives = 24/32 (75%)
Frame = +2 / +1
Query: 509 AAAMDSNKGNDFQYIPFGAGRRMCPAISFATA 604
+AA KGNDF Y+PFG GRR+CP I+FA A
Sbjct: 274 SAATMDYKGNDFSYLPFGTGRRICPGINFAIA 369
Score = 37.7 bits (76), Expect(2) = 2e-025
Identities = 15/23 (65%), Positives = 17/23 (73%)
Frame = -2 / -3
Query: 603 AVAKLMAGHILLPAPNGMYWKSF 535
A+AKL+ G IL P PNG Y KSF
Sbjct: 368 AIAKLIPGQILRPVPNGKYEKSF 300
>gb|AV934098.1|AV934098 AV934098 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal11a04 5', mRNA sequence
Length = 638
Score = 122 bits (260), Expect(4) = 1e-050
Identities = 43/74 (58%), Positives = 61/74 (82%)
Frame = +2 / +3
Query: 242 IINNGTEIVTEDELHSLSYLKAVVKETLRLHMPAPLLVPHLSMADCTIQGYTIPSGTRTI 421
I+ G EI++E ++++++YL+AV+KE+LRLH APLL PHL+MADC I GY +P+GTR +
Sbjct: 315 ILPQGQEIISETDMNNMTYLRAVIKESLRLHPVAPLLAPHLAMADCIIDGYIVPAGTRVV 494
Query: 422 VNSWALARDPSCWE 463
VN+WA+ RDPS WE
Sbjct: 495 VNAWAIGRDPSSWE 536
Score = 77.1 bits (162), Expect(4) = 1e-050
Identities = 32/63 (50%), Positives = 44/63 (69%)
Frame = +2 / +3
Query: 56 FIHVLLSLQQEYNLTRDQIKAQLVVMFEAGTDTSFIVLEYAMVQLMRNPHLMTKLQAEVR 235
F+ ++LS+QQEY LTR+ +KA L +F DTS VLE+ + +LMR PH+M KLQ EVR
Sbjct: 132 FVDIMLSVQQEYALTREHMKALLTDVFFGAIDTSANVLEFTLAELMRRPHMMEKLQDEVR 311
Query: 236 STI 244
+
Sbjct: 312 GIL 320
Score = 31.3 bits (62), Expect(4) = 1e-050
Identities = 10/12 (83%), Positives = 12/12 (100%)
Frame = +2 / +1
Query: 530 KGNDFQYIPFGA 565
KGNDFQ++PFGA
Sbjct: 601 KGNDFQFLPFGA 636
Score = 25.4 bits (49), Expect(4) = 1e-050
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +2 / +1
Query: 470 EEFMPERFMEGGS 508
EEF+PERF + GS
Sbjct: 544 EEFIPERFTDEGS 582
>gb|BJ465003.1|BJ465003 BJ465003 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags36o23 5', mRNA sequence
Length = 664
Score = 164 bits (352), Expect(2) = 3e-050
Identities = 66/78 (84%), Positives = 72/78 (92%)
Frame = +2 / +3
Query: 290 LSYLKAVVKETLRLHMPAPLLVPHLSMADCTIQGYTIPSGTRTIVNSWALARDPSCWERA 469
L+YLKAV+KETLRLHMPAPLLVPHL+MADC I GYTIPSGTR IVNS A+ARDPS WE A
Sbjct: 33 LAYLKAVIKETLRLHMPAPLLVPHLAMADCVINGYTIPSGTRVIVNSRAIARDPSSWESA 212
Query: 470 EEFMPERFMEGGSAAAMD 523
EEF+PERFM+GGSAAAMD
Sbjct: 213 EEFLPERFMQGGSAAAMD 266
Score = 102 bits (218), Expect(2) = 3e-024
Identities = 46/77 (59%), Positives = 50/77 (64%)
Frame = +3 / +1
Query: 291 YPTSRQSSKRRCGSTCRLHSSCPTSPWPTAPYKGTRYRREHEPSSTAGLSRGTPAAGREP 470
+PT R SS+R G TC CP SPWPTA T YR H SS AGLSRG PAAGR
Sbjct: 34 WPT*RPSSRRHSGFTCLRRFWCPISPWPTAS*TATPYRPGHASSSIAGLSRGIPAAGRAR 213
Query: 471 RSSCPSASWRAAVPQPW 521
RSSC SAS +AAV +PW
Sbjct: 214 RSSCLSASCKAAVLRPW 264
Score = 92.7 bits (196), Expect(2) = 7e-021
Identities = 42/76 (55%), Positives = 46/76 (60%)
Frame = +1 / +2
Query: 295 LPQGSRQRDAAAPHAGSTPRAPPLHGRLHHTRVHDTVGNTNHRQQLGSREGPQLLGESRG 474
LP+G Q D A HA + AP HGRL H R+H TV +T HRQ G REG Q LGE G
Sbjct: 38 LPKGRHQGDTPASHACAASGAPSRHGRLRHKRLHHTVRDTRHRQ*PGYREGSQQLGERGG 217
Query: 475 VHARALHGGRQCRSHG 522
V A ALH RQC HG
Sbjct: 218 VPA*ALHARRQCCGHG 265
Score = 54.2 bits (112), Expect(2) = 3e-050
Identities = 21/35 (60%), Positives = 25/35 (71%)
Frame = +2 / +3
Query: 503 GSAAAMDSNKGNDFQYIPFGAGRRMCPAISFATAA 607
G +AA KGN F Y+PFG GRR+CP I+FA AA
Sbjct: 243 GGSAAAMDYKGNGFLYLPFGTGRRICPGINFAIAA 347
Score = 28.6 bits (56), Expect(2) = 3e-024
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +3 / +1
Query: 531 RGTTSSTYRSAQGEGCAP 584
RGT SST RS +G G AP
Sbjct: 271 RGTVSSTCRSGRGGGYAP 324
Score = 27.2 bits (53), Expect(2) = 7e-021
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +1 / +2
Query: 532 GERLPVHTVRRREKDVPRHQL 594
GER P+ VR +D+PR++L
Sbjct: 272 GERFPLPAVRDGAEDMPRYKL 334
>gb|BJ548006.1|BJ548006 BJ548006 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal15n22 3', mRNA sequence
Length = 684
Score = 143 bits (306), Expect(3) = 4e-050
Identities = 52/89 (58%), Positives = 72/89 (80%)
Frame = +2 / -3
Query: 242 IINNGTEIVTEDELHSLSYLKAVVKETLRLHMPAPLLVPHLSMADCTIQGYTIPSGTRTI 421
I+ G EI++E ++++++YL+AV+KE+LRLH APLL PHL+MADC I GY +P+GTR +
Sbjct: 589 ILPQGQEIISETDMNNMTYLRAVIKESLRLHPVAPLLAPHLAMADCIIDGYIVPAGTRVV 410
Query: 422 VNSWALARDPSCWERAEEFMPERFMEGGS 508
VN+WA+ RDPS WE EEF+PERF + GS
Sbjct: 409 VNAWAIGRDPSSWEYPEEFIPERFTDEGS 323
Score = 50.6 bits (104), Expect(3) = 4e-050
Identities = 17/25 (68%), Positives = 21/25 (84%)
Frame = +2 / -3
Query: 530 KGNDFQYIPFGAGRRMCPAISFATA 604
KGNDFQ++PFGAGRRMCP ++ A
Sbjct: 304 KGNDFQFLPFGAGRRMCPGMNLGIA 230
Score = 42.8 bits (87), Expect(3) = 4e-050
Identities = 17/32 (53%), Positives = 22/32 (68%)
Frame = +2 / -3
Query: 149 DTSFIVLEYAMVQLMRNPHLMTKLQAEVRSTI 244
DTS V E+ + +LMR PH+M KLQ EVR +
Sbjct: 679 DTSANVXEFTLAELMRRPHMMEKLQDEVRGIL 584
>gb|AV917238.1|AV917238 AV917238 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags18b09 5', mRNA sequence
Length = 615
Score = 122 bits (262), Expect(2) = 2e-040
Identities = 53/74 (71%), Positives = 61/74 (82%)
Frame = +2 / +1
Query: 56 FIHVLLSLQQEYNLTRDQIKAQLVVMFEAGTDTSFIVLEYAMVQLMRNPHLMTKLQAEVR 235
FIHVLLS+QQEYNLTRD IKAQL++MFEAGTDTS IVLEYAMV+LM+NP +M LQAEVR
Sbjct: 235 FIHVLLSVQQEYNLTRDHIKAQLLIMFEAGTDTSTIVLEYAMVRLMQNPRVMAMLQAEVR 414
Query: 236 STIINNGTEIVTED 277
STI + +D
Sbjct: 415 STIPKGKDTVTQDD 456
Score = 115 bits (246), Expect(2) = 6e-050
Identities = 44/65 (67%), Positives = 54/65 (83%)
Frame = +2 / +1
Query: 245 INNGTEIVTEDELHSLSYLKAVVKETLRLHMPAPLLVPHLSMADCTIQGYTIPSGTRTIV 424
I G + VT+D+LH L YLKAV+KETLRLHMP PL+VPHLSM +C I GYTIPSGTRT +
Sbjct: 421 IPKGKDTVTQDDLHGLPYLKAVIKETLRLHMPGPLMVPHLSMDECIINGYTIPSGTRTFI 600
Query: 425 NSWAL 439
N++A+
Sbjct: 601 NTYAI 615
Score = 104 bits (222), Expect(2) = 2e-031
Identities = 49/63 (77%), Positives = 53/63 (84%)
Frame = -2 / -2
Query: 243 MVLLTSACSLVIRWGFRIS*TMAYSSTMKDVSVPASNMTTSCALI*SLVRLYSC*RESKT 64
MVLLTSACS+ + GF IS TMAYSSTM DVSVPASNM ++ ALI SLVRLYSC* ESKT
Sbjct: 422 MVLLTSACSMAMTRGFCISRTMAYSSTMVDVSVPASNMISN*ALIWSLVRLYSC*TESKT 243
Query: 63 WMK 55
WMK
Sbjct: 242 WMK 234
Score = 101 bits (216), Expect(2) = 6e-050
Identities = 43/68 (63%), Positives = 47/68 (69%)
Frame = +1 / +3
Query: 40 GGGE*FHPCLALPSARVQPDERSDQGAAGGHVRSWH*HILHSAGIRHGSADAKPPPDDQA 219
G G+ HP LA SARVQP +R Q + HV SWH HI HS GIRHGSADA+PP A
Sbjct: 219 GRGQGLHPRLAFCSARVQPHKRPYQSSVADHV*SWHGHINHSTGIRHGSADAEPPRHGHA 398
Query: 220 TSRGEEHH 243
TSRGEEHH
Sbjct: 399 TSRGEEHH 422
Score = 101 bits (215), Expect(2) = 5e-030
Identities = 41/63 (65%), Positives = 49/63 (77%)
Frame = -1 / -1
Query: 241 GAPHLGL*LGHQVGVSHQLNHGVFQHYEGCVSASFEHDHQLRLDLISRQVVLLLKGEQDM 62
GAPHLGL* GH GV HQ NHGVFQ+Y CV ASF+HD QL D++S +VVLLL +QD+
Sbjct: 420 GAPHLGL*HGHDAGVLHQPNHGVFQYYG*CVRASFKHDQQLSFDMVSCEVVLLLNRKQDV 241
Query: 61 DEI 53
DE+
Sbjct: 240 DEV 232
Score = 62.5 bits (130), Expect(2) = 2e-040
Identities = 29/54 (53%), Positives = 31/54 (57%)
Frame = +3 / +2
Query: 267 SPRTSSTAYPTSRQSSKRRCGSTCRLHSSCPTSPWPTAPYKGTRYRREHEPSST 428
SP+T ST PT RQ S+R G TCR S CP SPW A TRY R SST
Sbjct: 443 SPKTISTVCPT*RQ*SRRHSGFTCRGRSWCPISPWTNAS*TATRYHRGRALSST 604
Score = 51.0 bits (105), Expect(2) = 2e-031
Identities = 26/58 (44%), Positives = 33/58 (56%)
Frame = -1 / -1
Query: 439 ESPAVDDGSCSRRYRVPLYGAXXXXXXXXXEWSRHVEPQRLFDDCLEVG*AVELVLGD 266
+S VD+ + R YRV +Y A E RHV+P+ L D CL VG VE+VLGD
Sbjct: 615 DSIGVDESARPRWYRVAVYDAFVHGEMGHHERPRHVKPECLLDHCL*VGQTVEIVLGD 442
Score = 49.2 bits (101), Expect(2) = 5e-030
Identities = 23/44 (52%), Positives = 25/44 (56%)
Frame = -3 / -3
Query: 407 PTVSCTLVWCSRPWRGGARGVEPACGAAASL*RLP*GRIGCGAR 276
P VSC+ + C RPWR GA PAC A S * LP GR G R
Sbjct: 583 PMVSCSRL*CIRPWRDGAP*AAPACEAGVSP*SLPLGRADRGDR 452
>gb|AV918446.1|AV918446 AV918446 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags21b10 3', mRNA sequence
Length = 604
Score = 158 bits (340), Expect(2) = 1e-048
Identities = 64/75 (85%), Positives = 69/75 (92%)
Frame = +2 / -2
Query: 299 LKAVVKETLRLHMPAPLLVPHLSMADCTIQGYTIPSGTRTIVNSWALARDPSCWERAEEF 478
LKAV+KETLRLHMPAPLLVPHL+MADC I GYTIPSGTR IVNS A+ARDPS WE AEEF
Sbjct: 603 LKAVIKETLRLHMPAPLLVPHLAMADCVINGYTIPSGTRVIVNSRAIARDPSSWESAEEF 424
Query: 479 MPERFMEGGSAAAMD 523
+PERFM+GGSAAAMD
Sbjct: 423 LPERFMQGGSAAAMD 379
Score = 98.2 bits (208), Expect(2) = 6e-023
Identities = 44/73 (60%), Positives = 47/73 (64%)
Frame = +3 / -3
Query: 303 RQSSKRRCGSTCRLHSSCPTSPWPTAPYKGTRYRREHEPSSTAGLSRGTPAAGREPRSSC 482
R SS+R G TC CP SPWPTA T YR H SS AGLSRG PAAGR RSSC
Sbjct: 599 RPSSRRHSGFTCLRRFWCPISPWPTAS*TATPYRPGHASSSIAGLSRGIPAAGRARRSSC 420
Query: 483 PSASWRAAVPQPW 521
SAS +AAV +PW
Sbjct: 419 LSASCKAAVLRPW 381
Score = 54.2 bits (112), Expect(2) = 1e-048
Identities = 21/35 (60%), Positives = 25/35 (71%)
Frame = +2 / -2
Query: 503 GSAAAMDSNKGNDFQYIPFGAGRRMCPAISFATAA 607
G +AA KGN F Y+PFG GRR+CP I+FA AA
Sbjct: 402 GGSAAAMDYKGNGFLYLPFGTGRRICPGINFAIAA 298
Score = 28.6 bits (56), Expect(2) = 6e-023
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +3 / -3
Query: 531 RGTTSSTYRSAQGEGCAP 584
RGT SST RS +G G AP
Sbjct: 374 RGTVSSTCRSGRGGGYAP 321
>gb|AV927306.1|AV927306 AV927306 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd1h15 3', mRNA sequence
Length = 586
Score = 158 bits (340), Expect(2) = 1e-048
Identities = 64/75 (85%), Positives = 69/75 (92%)
Frame = +2 / -3
Query: 299 LKAVVKETLRLHMPAPLLVPHLSMADCTIQGYTIPSGTRTIVNSWALARDPSCWERAEEF 478
LKAV+KETLRLHMPAPLLVPHL+MADC I GYTIPSGTR IVNS A+ARDPS WE AEEF
Sbjct: 584 LKAVIKETLRLHMPAPLLVPHLAMADCVINGYTIPSGTRVIVNSRAIARDPSSWESAEEF 405
Query: 479 MPERFMEGGSAAAMD 523
+PERFM+GGSAAAMD
Sbjct: 404 LPERFMQGGSAAAMD 360
Score = 98.7 bits (209), Expect(2) = 5e-023
Identities = 45/75 (60%), Positives = 48/75 (64%)
Frame = +3 / -1
Query: 297 TSRQSSKRRCGSTCRLHSSCPTSPWPTAPYKGTRYRREHEPSSTAGLSRGTPAAGREPRS 476
T R SS+R G TC CP SPWPTA T YR H SS AGLSRG PAAGR RS
Sbjct: 586 T*RPSSRRHSGFTCLRRFWCPISPWPTAS*TATPYRPGHASSSIAGLSRGIPAAGRARRS 407
Query: 477 SCPSASWRAAVPQPW 521
SC SAS +AAV +PW
Sbjct: 406 SCLSASCKAAVLRPW 362
Score = 54.2 bits (112), Expect(2) = 1e-048
Identities = 21/35 (60%), Positives = 25/35 (71%)
Frame = +2 / -3
Query: 503 GSAAAMDSNKGNDFQYIPFGAGRRMCPAISFATAA 607
G +AA KGN F Y+PFG GRR+CP I+FA AA
Sbjct: 383 GGSAAAMDYKGNGFLYLPFGTGRRICPGINFAIAA 279
Score = 28.6 bits (56), Expect(2) = 5e-023
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +3 / -1
Query: 531 RGTTSSTYRSAQGEGCAP 584
RGT SST RS +G G AP
Sbjct: 355 RGTVSSTCRSGRGGGYAP 302
>gb|AV936516.1|AV936516 AV936516 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal11k15 3', mRNA sequence
Length = 707
Score = 143 bits (306), Expect(3) = 2e-048
Identities = 52/89 (58%), Positives = 72/89 (80%)
Frame = +2 / -2
Query: 242 IINNGTEIVTEDELHSLSYLKAVVKETLRLHMPAPLLVPHLSMADCTIQGYTIPSGTRTI 421
I+ G EI++E ++++++YL+AV+KE+LRLH APLL PHL+MADC I GY +P+GTR +
Sbjct: 610 ILPQGQEIISETDMNNMTYLRAVIKESLRLHPVAPLLAPHLAMADCIIDGYIVPAGTRVV 431
Query: 422 VNSWALARDPSCWERAEEFMPERFMEGGS 508
VN+WA+ RDPS WE EEF+PERF + GS
Sbjct: 430 VNAWAIGRDPSSWEYPEEFIPERFTDEGS 344
Score = 50.6 bits (104), Expect(3) = 2e-048
Identities = 17/25 (68%), Positives = 21/25 (84%)
Frame = +2 / -2
Query: 530 KGNDFQYIPFGAGRRMCPAISFATA 604
KGNDFQ++PFGAGRRMCP ++ A
Sbjct: 325 KGNDFQFLPFGAGRRMCPGMNLGIA 251
Score = 36.8 bits (74), Expect(3) = 2e-048
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +2 / -2
Query: 170 EYAMVQLMRNPHLMTKLQAEVRSTI 244
E+ + +LMR PH+M KLQ EVR +
Sbjct: 679 EFTLAELMRRPHMMEKLQDEVRGIL 605
>gb|BJ548975.1|BJ548975 BJ548975 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal40l11 3', mRNA sequence
Length = 696
Score = 143 bits (306), Expect(3) = 3e-047
Identities = 52/89 (58%), Positives = 72/89 (80%)
Frame = +2 / -1
Query: 242 IINNGTEIVTEDELHSLSYLKAVVKETLRLHMPAPLLVPHLSMADCTIQGYTIPSGTRTI 421
I+ G EI++E ++++++YL+AV+KE+LRLH APLL PHL+MADC I GY +P+GTR +
Sbjct: 603 ILPQGQEIISETDMNNMTYLRAVIKESLRLHPVAPLLAPHLAMADCIIDGYIVPAGTRVV 424
Query: 422 VNSWALARDPSCWERAEEFMPERFMEGGS 508
VN+WA+ RDPS WE EEF+PERF + GS
Sbjct: 423 VNAWAIGRDPSSWEYPEEFIPERFTDEGS 337
Score = 50.6 bits (104), Expect(3) = 3e-047
Identities = 17/25 (68%), Positives = 21/25 (84%)
Frame = +2 / -1
Query: 530 KGNDFQYIPFGAGRRMCPAISFATA 604
KGNDFQ++PFGAGRRMCP ++ A
Sbjct: 318 KGNDFQFLPFGAGRRMCPGMNLGIA 244
Score = 33.1 bits (66), Expect(3) = 3e-047
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +2 / -2
Query: 149 DTSFIVLEYAMVQLMRNPHLM 211
DTS VLE+ + +LMR PH+M
Sbjct: 692 DTSANVLEFTLAELMRRPHMM 630
>gb|BJ548386.1|BJ548386 BJ548386 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal24a03 3', mRNA sequence
Length = 645
Score = 143 bits (306), Expect(3) = 4e-047
Identities = 52/89 (58%), Positives = 72/89 (80%)
Frame = +2 / -2
Query: 242 IINNGTEIVTEDELHSLSYLKAVVKETLRLHMPAPLLVPHLSMADCTIQGYTIPSGTRTI 421
I+ G EI++E ++++++YL+AV+KE+LRLH APLL PHL+MADC I GY +P+GTR +
Sbjct: 590 ILPQGQEIISETDMNNMTYLRAVIKESLRLHPVAPLLAPHLAMADCIIDGYIVPAGTRVV 411
Query: 422 VNSWALARDPSCWERAEEFMPERFMEGGS 508
VN+WA+ RDPS WE EEF+PERF + GS
Sbjct: 410 VNAWAIGRDPSSWEYPEEFIPERFTDEGS 324
Score = 50.6 bits (104), Expect(3) = 4e-047
Identities = 17/25 (68%), Positives = 21/25 (84%)
Frame = +2 / -2
Query: 530 KGNDFQYIPFGAGRRMCPAISFATA 604
KGNDFQ++PFGAGRRMCP ++ A
Sbjct: 305 KGNDFQFLPFGAGRRMCPGMNLGIA 231
Score = 32.7 bits (65), Expect(3) = 4e-047
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +2 / -2
Query: 185 QLMRNPHLMTKLQAEVRSTI 244
+LMR PH+M KLQ EVR +
Sbjct: 644 ELMRRPHMMXKLQDEVRGIL 585
>gb|BJ548998.1|BJ548998 BJ548998 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal16j19 3', mRNA sequence
Length = 669
Score = 143 bits (306), Expect(3) = 5e-047
Identities = 52/89 (58%), Positives = 72/89 (80%)
Frame = +2 / -2
Query: 242 IINNGTEIVTEDELHSLSYLKAVVKETLRLHMPAPLLVPHLSMADCTIQGYTIPSGTRTI 421
I+ G EI++E ++++++YL+AV+KE+LRLH APLL PHL+MADC I GY +P+GTR +
Sbjct: 611 ILPQGQEIISETDMNNMTYLRAVIKESLRLHPVAPLLAPHLAMADCIIDGYIVPAGTRVV 432
Query: 422 VNSWALARDPSCWERAEEFMPERFMEGGS 508
VN+WA+ RDPS WE EEF+PERF + GS
Sbjct: 431 VNAWAIGRDPSSWEYPEEFIPERFTDEGS 345
Score = 50.6 bits (104), Expect(3) = 5e-047
Identities = 17/25 (68%), Positives = 21/25 (84%)
Frame = +2 / -2
Query: 530 KGNDFQYIPFGAGRRMCPAISFATA 604
KGNDFQ++PFGAGRRMCP ++ A
Sbjct: 326 KGNDFQFLPFGAGRRMCPGMNLGIA 252
Score = 32.2 bits (64), Expect(3) = 5e-047
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +2 / -2
Query: 185 QLMRNPHLMTKLQAEVRSTI 244
+LMR PH+M KLQ EVR +
Sbjct: 665 ELMRRPHMMEKLQDEVRGIL 606
>gb|AV936349.1|AV936349 AV936349 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal11a04 3', mRNA sequence
Length = 668
Score = 143 bits (306), Expect(3) = 5e-047
Identities = 52/89 (58%), Positives = 72/89 (80%)
Frame = +2 / -1
Query: 242 IINNGTEIVTEDELHSLSYLKAVVKETLRLHMPAPLLVPHLSMADCTIQGYTIPSGTRTI 421
I+ G EI++E ++++++YL+AV+KE+LRLH APLL PHL+MADC I GY +P+GTR +
Sbjct: 611 ILPQGQEIISETDMNNMTYLRAVIKESLRLHPVAPLLAPHLAMADCIIDGYIVPAGTRVV 432
Query: 422 VNSWALARDPSCWERAEEFMPERFMEGGS 508
VN+WA+ RDPS WE EEF+PERF + GS
Sbjct: 431 VNAWAIGRDPSSWEYPEEFIPERFTDEGS 345
Score = 50.6 bits (104), Expect(3) = 5e-047
Identities = 17/25 (68%), Positives = 21/25 (84%)
Frame = +2 / -1
Query: 530 KGNDFQYIPFGAGRRMCPAISFATA 604
KGNDFQ++PFGAGRRMCP ++ A
Sbjct: 326 KGNDFQFLPFGAGRRMCPGMNLGIA 252
Score = 32.2 bits (64), Expect(3) = 5e-047
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +2 / -1
Query: 185 QLMRNPHLMTKLQAEVRSTI 244
+LMR PH+M KLQ EVR +
Sbjct: 665 ELMRRPHMMEKLQDEVRGIL 606
>gb|AV920965.1|AV920965 AV920965 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags16e06 3', mRNA sequence
Length = 594
Score = 152 bits (327), Expect(2) = 8e-047
Identities = 61/72 (84%), Positives = 66/72 (91%)
Frame = +2 / -2
Query: 308 VVKETLRLHMPAPLLVPHLSMADCTIQGYTIPSGTRTIVNSWALARDPSCWERAEEFMPE 487
V+KETLRLHMPAPLLVPHL+MADC I GYTIPSGTR IVNS A+ARDPS WE AEEF+PE
Sbjct: 593 VIKETLRLHMPAPLLVPHLAMADCVINGYTIPSGTRVIVNSRAIARDPSSWESAEEFLPE 414
Query: 488 RFMEGGSAAAMD 523
RFM+GGSAAAMD
Sbjct: 413 RFMQGGSAAAMD 378
Score = 96.4 bits (204), Expect(2) = 2e-022
Identities = 43/71 (60%), Positives = 46/71 (64%)
Frame = +3 / -3
Query: 309 SSKRRCGSTCRLHSSCPTSPWPTAPYKGTRYRREHEPSSTAGLSRGTPAAGREPRSSCPS 488
SS+R G TC CP SPWPTA T YR H SS AGLSRG PAAGR RSSC S
Sbjct: 592 SSRRHSGFTCLRRFWCPISPWPTAS*TATPYRPGHASSSIAGLSRGIPAAGRARRSSCLS 413
Query: 489 ASWRAAVPQPW 521
AS +AAV +PW
Sbjct: 412 ASCKAAVLRPW 380
Score = 54.2 bits (112), Expect(2) = 8e-047
Identities = 21/35 (60%), Positives = 25/35 (71%)
Frame = +2 / -2
Query: 503 GSAAAMDSNKGNDFQYIPFGAGRRMCPAISFATAA 607
G +AA KGN F Y+PFG GRR+CP I+FA AA
Sbjct: 401 GGSAAAMDYKGNGFLYLPFGTGRRICPGINFAIAA 297
Score = 28.6 bits (56), Expect(2) = 2e-022
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +3 / -3
Query: 531 RGTTSSTYRSAQGEGCAP 584
RGT SST RS +G G AP
Sbjct: 373 RGTVSSTCRSGRGGGYAP 320
>gb|BJ547960.1|BJ547960 BJ547960 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal12i23 3', mRNA sequence
Length = 669
Score = 143 bits (306), Expect(3) = 1e-046
Identities = 52/89 (58%), Positives = 72/89 (80%)
Frame = +2 / -3
Query: 242 IINNGTEIVTEDELHSLSYLKAVVKETLRLHMPAPLLVPHLSMADCTIQGYTIPSGTRTI 421
I+ G EI++E ++++++YL+AV+KE+LRLH APLL PHL+MADC I GY +P+GTR +
Sbjct: 616 ILPQGQEIISETDMNNMTYLRAVIKESLRLHPVAPLLAPHLAMADCIIDGYIVPAGTRVV 437
Query: 422 VNSWALARDPSCWERAEEFMPERFMEGGS 508
VN+WA+ RDPS WE EEF+PERF + GS
Sbjct: 436 VNAWAIGRDPSSWEYPEEFIPERFTDEGS 350
Score = 50.6 bits (104), Expect(3) = 1e-046
Identities = 17/25 (68%), Positives = 21/25 (84%)
Frame = +2 / -3
Query: 530 KGNDFQYIPFGAGRRMCPAISFATA 604
KGNDFQ++PFGAGRRMCP ++ A
Sbjct: 331 KGNDFQFLPFGAGRRMCPGMNLGIA 257
Score = 31.3 bits (62), Expect(3) = 1e-046
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +2 / -3
Query: 188 LMRNPHLMTKLQAEVRSTI 244
LMR PH+M KLQ EVR +
Sbjct: 667 LMRRPHMMEKLQDEVRGIL 611
>gb|BJ464493.1|BJ464493 BJ464493 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags34j09 5', mRNA sequence
Length = 523
Score = 122 bits (262), Expect(2) = 2e-039
Identities = 53/74 (71%), Positives = 61/74 (82%)
Frame = +2 / +1
Query: 56 FIHVLLSLQQEYNLTRDQIKAQLVVMFEAGTDTSFIVLEYAMVQLMRNPHLMTKLQAEVR 235
FIHVLLS+QQEYNLTRD IKAQL++MFEAGTDTS IVLEYAMV+LM+NP +M LQAEVR
Sbjct: 142 FIHVLLSVQQEYNLTRDHIKAQLLIMFEAGTDTSTIVLEYAMVRLMQNPRVMAMLQAEVR 321
Query: 236 STIINNGTEIVTED 277
STI + +D
Sbjct: 322 STIPKGKDTVTQDD 363
Score = 104 bits (222), Expect(2) = 6e-031
Identities = 49/63 (77%), Positives = 53/63 (84%)
Frame = -2 / -3
Query: 243 MVLLTSACSLVIRWGFRIS*TMAYSSTMKDVSVPASNMTTSCALI*SLVRLYSC*RESKT 64
MVLLTSACS+ + GF IS TMAYSSTM DVSVPASNM ++ ALI SLVRLYSC* ESKT
Sbjct: 329 MVLLTSACSMAMTRGFCISRTMAYSSTMVDVSVPASNMISN*ALIWSLVRLYSC*TESKT 150
Query: 63 WMK 55
WMK
Sbjct: 149 WMK 141
Score = 101 bits (216), Expect(2) = 2e-045
Identities = 43/68 (63%), Positives = 47/68 (69%)
Frame = +1 / +3
Query: 40 GGGE*FHPCLALPSARVQPDERSDQGAAGGHVRSWH*HILHSAGIRHGSADAKPPPDDQA 219
G G+ HP LA SARVQP +R Q + HV SWH HI HS GIRHGSADA+PP A
Sbjct: 126 GRGQGLHPRLAFCSARVQPHKRPYQSSVADHV*SWHGHINHSTGIRHGSADAEPPRHGHA 305
Query: 220 TSRGEEHH 243
TSRGEEHH
Sbjct: 306 TSRGEEHH 329
Score = 101 bits (215), Expect(2) = 6e-029
Identities = 41/63 (65%), Positives = 49/63 (77%)
Frame = -1 / -2
Query: 241 GAPHLGL*LGHQVGVSHQLNHGVFQHYEGCVSASFEHDHQLRLDLISRQVVLLLKGEQDM 62
GAPHLGL* GH GV HQ NHGVFQ+Y CV ASF+HD QL D++S +VVLLL +QD+
Sbjct: 327 GAPHLGL*HGHDAGVLHQPNHGVFQYYG*CVRASFKHDQQLSFDMVSCEVVLLLNRKQDV 148
Query: 61 DEI 53
DE+
Sbjct: 147 DEV 139
Score = 100 bits (213), Expect(2) = 2e-045
Identities = 39/55 (70%), Positives = 45/55 (81%)
Frame = +2 / +1
Query: 245 INNGTEIVTEDELHSLSYLKAVVKETLRLHMPAPLLVPHLSMADCTIQGYTIPSG 409
I G + VT+D+LH L YLKAV+KETLRLHMP PL+VPHLSM +C I GYTIPSG
Sbjct: 328 IPKGKDTVTQDDLHGLPYLKAVIKETLRLHMPGPLMVPHLSMDECIINGYTIPSG 492
Score = 59.3 bits (123), Expect(2) = 2e-039
Identities = 26/47 (55%), Positives = 28/47 (59%)
Frame = +3 / +2
Query: 267 SPRTSSTAYPTSRQSSKRRCGSTCRLHSSCPTSPWPTAPYKGTRYRR 407
SP+T ST PT RQ S+R G TCR S CP SPW A TRY R
Sbjct: 350 SPKTISTVCPT*RQ*SRRHSGFTCRGRSWCPISPWTNAS*TATRYHR 490
Score = 49.2 bits (101), Expect(2) = 6e-031
Identities = 23/44 (52%), Positives = 25/44 (56%)
Frame = -3 / -1
Query: 407 PTVSCTLVWCSRPWRGGARGVEPACGAAASL*RLP*GRIGCGAR 276
P VSC+ + C RPWR GA PAC A S * LP GR G R
Sbjct: 490 PMVSCSRL*CIRPWRDGAP*AAPACEAGVSP*SLPLGRADRGDR 359
Score = 45.5 bits (93), Expect(2) = 6e-029
Identities = 23/47 (48%), Positives = 27/47 (57%)
Frame = -1 / -2
Query: 406 RRYRVPLYGAXXXXXXXXXEWSRHVEPQRLFDDCLEVG*AVELVLGD 266
R YRV +Y A E RHV+P+ L D CL VG VE+VLGD
Sbjct: 489 RWYRVAVYDAFVHGEMGHHERPRHVKPECLLDHCL*VGQTVEIVLGD 349
>gb|AV918673.1|AV918673 AV918673 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags21n09 3', mRNA sequence
Length = 583
Score = 144 bits (310), Expect(2) = 2e-044
Identities = 58/68 (85%), Positives = 62/68 (91%)
Frame = +2 / -3
Query: 320 TLRLHMPAPLLVPHLSMADCTIQGYTIPSGTRTIVNSWALARDPSCWERAEEFMPERFME 499
TLRLHMPAPLLVPHL+MADC I GYTIPSGTR IVNS A+ARDPS WE AEEF+PERFM+
Sbjct: 581 TLRLHMPAPLLVPHLAMADCVINGYTIPSGTRVIVNSRAIARDPSSWESAEEFLPERFMQ 402
Query: 500 GGSAAAMD 523
GGSAAAMD
Sbjct: 401 GGSAAAMD 378
Score = 54.2 bits (112), Expect(2) = 2e-044
Identities = 21/35 (60%), Positives = 25/35 (71%)
Frame = +2 / -3
Query: 503 GSAAAMDSNKGNDFQYIPFGAGRRMCPAISFATAA 607
G +AA KGN F Y+PFG GRR+CP I+FA AA
Sbjct: 401 GGSAAAMDYKGNGFLYLPFGTGRRICPGINFAIAA 297
>gb|AV913374.1|AV913374 AV913374 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags21n09 5', mRNA sequence
Length = 522
Score = 144 bits (310), Expect(2) = 2e-044
Identities = 58/68 (85%), Positives = 62/68 (91%)
Frame = +2 / +1
Query: 320 TLRLHMPAPLLVPHLSMADCTIQGYTIPSGTRTIVNSWALARDPSCWERAEEFMPERFME 499
TLRLHMPAPLLVPHL+MADC I GYTIPSGTR IVNS A+ARDPS WE AEEF+PERFM+
Sbjct: 13 TLRLHMPAPLLVPHLAMADCVINGYTIPSGTRVIVNSRAIARDPSSWESAEEFLPERFMQ 192
Query: 500 GGSAAAMD 523
GGSAAAMD
Sbjct: 193 GGSAAAMD 216
Score = 54.2 bits (112), Expect(2) = 2e-044
Identities = 21/35 (60%), Positives = 25/35 (71%)
Frame = +2 / +1
Query: 503 GSAAAMDSNKGNDFQYIPFGAGRRMCPAISFATAA 607
G +AA KGN F Y+PFG GRR+CP I+FA AA
Sbjct: 193 GGSAAAMDYKGNGFLYLPFGTGRRICPGINFAIAA 297
>gb|BJ460485.1|BJ460485 BJ460485 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak40p23 3', mRNA sequence
Length = 461
Score = 146 bits (314), Expect(2) = 2e-043
Identities = 58/78 (74%), Positives = 65/78 (83%)
Frame = +2 / -2
Query: 287 SLSYLKAVVKETLRLHMPAPLLVPHLSMADCTIQGYTIPSGTRTIVNSWALARDPSCWER 466
SL+YLK+V+KETLRLHM PLLVPHLSMA+C + G IPSG R I+NSWALARDP WE
Sbjct: 457 SLAYLKSVIKETLRLHMXGPLLVPHLSMAECNVNGXIIPSGIRVIINSWALARDPGSWEH 278
Query: 467 AEEFMPERFMEGGSAAAM 520
A+EFMPERFME GSAA M
Sbjct: 277 ADEFMPERFMECGSAAXM 224
Score = 48.7 bits (100), Expect(2) = 2e-043
Identities = 19/32 (59%), Positives = 22/32 (68%)
Frame = +2 / -2
Query: 509 AAAMDSNKGNDFQYIPFGAGRRMCPAISFATA 604
+AA KGNDF PFG GRR+CP I+FA A
Sbjct: 238 SAAXMXYKGNDFSXXPFGTGRRICPGINFAIA 143
>gb|AV921548.1|AV921548 AV921548 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags23m23 3', mRNA sequence
Length = 560
Score = 93.2 bits (197), Expect(3) = 1e-042
Identities = 36/45 (80%), Positives = 40/45 (88%)
Frame = +2 / -3
Query: 389 GYTIPSGTRTIVNSWALARDPSCWERAEEFMPERFMEGGSAAAMD 523
GYTIPSGTRT +N++A+ RDPS WE EEFMPERFMEGGSAAAMD
Sbjct: 477 GYTIPSGTRTFINTYAIQRDPSNWESPEEFMPERFMEGGSAAAMD 343
Score = 61.1 bits (127), Expect(3) = 1e-042
Identities = 23/34 (67%), Positives = 27/34 (79%)
Frame = +2 / -3
Query: 503 GSAAAMDSNKGNDFQYIPFGAGRRMCPAISFATA 604
G +AA KGNDFQY PFG+GRR+CP I+FATA
Sbjct: 366 GGSAAAMDYKGNDFQYFPFGSGRRICPGINFATA 265
Score = 57.0 bits (118), Expect(3) = 1e-042
Identities = 21/28 (75%), Positives = 24/28 (85%)
Frame = +2 / -2
Query: 308 VVKETLRLHMPAPLLVPHLSMADCTIQG 391
V+KETLRLHMP PL+VPHLSM +C I G
Sbjct: 559 VIKETLRLHMPGPLMVPHLSMDECIING 476
>gb|BJ546501.1|BJ546501 BJ546501 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak42e08 3', mRNA sequence
Length = 594
Score = 139 bits (299), Expect(2) = 7e-042
Identities = 51/89 (57%), Positives = 71/89 (79%)
Frame = +2 / -1
Query: 242 IINNGTEIVTEDELHSLSYLKAVVKETLRLHMPAPLLVPHLSMADCTIQGYTIPSGTRTI 421
I+ G EI++E ++++++YL+AV+KE+LRL APLL PHL+MADC I GY +P+GTR +
Sbjct: 537 IVPQGQEIISETDMNNMTYLRAVIKESLRLRPVAPLLAPHLAMADCIIDGYIVPAGTRVV 358
Query: 422 VNSWALARDPSCWERAEEFMPERFMEGGS 508
VN+WA+ RDPS WE EEF+PERF + GS
Sbjct: 357 VNAWAIGRDPSSWEYPEEFIPERFTDEGS 271
Score = 50.6 bits (104), Expect(2) = 7e-042
Identities = 17/25 (68%), Positives = 21/25 (84%)
Frame = +2 / -1
Query: 530 KGNDFQYIPFGAGRRMCPAISFATA 604
KGNDFQ++PFGAGRRMCP ++ A
Sbjct: 252 KGNDFQFLPFGAGRRMCPGMNLGIA 178
>gb|BJ547149.1|BJ547149 BJ547149 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal16j19 5', mRNA sequence
Length = 524
Score = 113 bits (241), Expect(2) = 7e-042
Identities = 40/70 (57%), Positives = 58/70 (82%)
Frame = +2 / +2
Query: 242 IINNGTEIVTEDELHSLSYLKAVVKETLRLHMPAPLLVPHLSMADCTIQGYTIPSGTRTI 421
I+ G EI++E ++++++YL+AV+KE+LRLH APLL PHL+MADC I GY +P+GTR +
Sbjct: 314 ILPQGQEIISETDMNNMTYLRAVIKESLRLHPVAPLLAPHLAMADCIIDGYIVPAGTRVV 493
Query: 422 VNSWALARDP 451
VN+WA+ RDP
Sbjct: 494 VNAWAIGRDP 523
Score = 77.1 bits (162), Expect(2) = 7e-042
Identities = 32/63 (50%), Positives = 44/63 (69%)
Frame = +2 / +2
Query: 56 FIHVLLSLQQEYNLTRDQIKAQLVVMFEAGTDTSFIVLEYAMVQLMRNPHLMTKLQAEVR 235
F+ ++LS+QQEY LTR+ +KA L +F DTS VLE+ + +LMR PH+M KLQ EVR
Sbjct: 131 FVDIMLSVQQEYALTREHMKALLTDVFFGAIDTSANVLEFTLAELMRRPHMMEKLQDEVR 310
Query: 236 STI 244
+
Sbjct: 311 GIL 319
>gb|AV935198.1|AV935198 AV935198 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal3e02 3', mRNA sequence
Length = 597
Score = 138 bits (297), Expect(2) = 1e-041
Identities = 50/83 (60%), Positives = 69/83 (83%)
Frame = +2 / -3
Query: 260 EIVTEDELHSLSYLKAVVKETLRLHMPAPLLVPHLSMADCTIQGYTIPSGTRTIVNSWAL 439
EI++E ++++++YL+AV+KE+LRLH APLL PHL+MADC I GY +P+GTR +VN+WA+
Sbjct: 592 EIISETDMNNMTYLRAVIKESLRLHPVAPLLAPHLAMADCIIDGYIVPAGTRVVVNAWAI 413
Query: 440 ARDPSCWERAEEFMPERFMEGGS 508
RDPS WE EEF+PERF + GS
Sbjct: 412 GRDPSSWEYPEEFIPERFTDEGS 344
Score = 50.6 bits (104), Expect(2) = 1e-041
Identities = 17/25 (68%), Positives = 21/25 (84%)
Frame = +2 / -3
Query: 530 KGNDFQYIPFGAGRRMCPAISFATA 604
KGNDFQ++PFGAGRRMCP ++ A
Sbjct: 325 KGNDFQFLPFGAGRRMCPGMNLGIA 251
>gb|AV912854.1|AV912854 AV912854 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags10j16 5', mRNA sequence
Length = 617
Score = 113 bits (241), Expect(2) = 3e-041
Identities = 42/72 (58%), Positives = 56/72 (77%)
Frame = +2 / +3
Query: 296 YLKAVVKETLRLHMPAPLLVPHLSMADCTIQGYTIPSGTRTIVNSWALARDPSCWERAEE 475
YL+AV+KE+LRL+ AP L PHL+M DC I GY +P+GT +VN WA+ RD + WE AEE
Sbjct: 372 YLRAVIKESLRLYPVAPFLPPHLAMGDCNIVGYMVPAGTHILVNVWAIGRDSNSWEDAEE 551
Query: 476 FMPERFMEGGSA 511
++PERF++ GSA
Sbjct: 552 YIPERFIDEGSA 587
Score = 74.8 bits (157), Expect(2) = 3e-041
Identities = 34/63 (53%), Positives = 43/63 (68%)
Frame = +2 / +3
Query: 56 FIHVLLSLQQEYNLTRDQIKAQLVVMFEAGTDTSFIVLEYAMVQLMRNPHLMTKLQAEVR 235
F+ +LLS Q+EY LTRD IKA L +F T+TS LE+ + +LMR P LM KLQ EVR
Sbjct: 138 FLDILLSAQEEYGLTRDHIKALLTDVFFGLTNTSSNTLEFTLAELMRRPSLMGKLQDEVR 317
Query: 236 STI 244
S +
Sbjct: 318 SIV 326
>gb|BE215637.1|BE215637 HV_CEb0007H18f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0007H18f, mRNA sequence
Length = 531
Score = 109 bits (232), Expect(3) = 9e-041
Identities = 42/83 (50%), Positives = 52/83 (62%)
Frame = +2 / +3
Query: 254 GTEIVTEDELHSLSYLKAVVKETLRLHMPAPLLVPHLSMADCTIQGYTIPSGTRTIVNSW 433
G VTED+L L Y++ V+KETLRLH PLL+P C + GY +P G VN+W
Sbjct: 180 GKPRVTEDDLADLKYMRLVIKETLRLHTSVPLLLPREPTEACKVLGYDVPKGATVFVNAW 359
Query: 434 ALARDPSCWERAEEFMPERFMEG 502
A+ RDP W+ AEEF PERF G
Sbjct: 360 AICRDPKHWDAAEEFRPERFESG 428
Score = 55.1 bits (114), Expect(3) = 9e-041
Identities = 25/49 (51%), Positives = 32/49 (65%)
Frame = +2 / +3
Query: 98 TRDQIKAQLVVMFEAGTDTSFIVLEYAMVQLMRNPHLMTKLQAEVRSTI 244
T IK LV +F AG++TS L +AM +LMRNP M K QAEVR+ +
Sbjct: 30 TMGAIKCLLVDLFSAGSETSATTLAWAMSELMRNPGAMAKAQAEVRNNL 176
Score = 40.5 bits (82), Expect(3) = 9e-041
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = +2 / +3
Query: 530 KGNDFQYIPFGAGRRMCP 583
KG +F+Y PFGAGRR+CP
Sbjct: 441 KGTNFEYTPFGAGRRICP 494
>gb|BG415142.2|BG415142 HVSMEk0005E23f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0005E23f, mRNA sequence
Length = 922
Score = 99.1 bits (210), Expect(3) = 7e-039
Identities = 38/79 (48%), Positives = 50/79 (63%)
Frame = +2 / +3
Query: 263 IVTEDELHSLSYLKAVVKETLRLHMPAPLLVPHLSMADCTIQGYTIPSGTRTIVNSWALA 442
++ E + +L YL VVKE+LRLH P PL++PH + A + GY IP G +VN WA+A
Sbjct: 207 VMAETDFQNLPYLMDVVKESLRLHPPTPLMLPHKASASVKVGGYNIPKGANVMVNVWAVA 386
Query: 443 RDPSCWERAEEFMPERFME 499
RDP W EF PER +E
Sbjct: 387 RDPKVWTSPLEFRPERSLE 443
Score = 58.8 bits (122), Expect(3) = 7e-039
Identities = 24/63 (38%), Positives = 41/63 (65%)
Frame = +2 / +3
Query: 56 FIHVLLSLQQEYNLTRDQIKAQLVVMFEAGTDTSFIVLEYAMVQLMRNPHLMTKLQAEVR 235
F+ L +L+++Y+L+ D + L M AG DT+ I +E+AM +L+RNP + KLQ E+
Sbjct: 6 FVDALFTLREKYDLSDDTVFGLLWDMITAGMDTTVISVEWAMAELVRNPRVQQKLQEELD 185
Query: 236 STI 244
+ +
Sbjct: 186 NVV 194
Score = 40.5 bits (82), Expect(3) = 7e-039
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = +2 / +3
Query: 530 KGNDFQYIPFGAGRRMCPAISF 595
KG DF+ +PFGAGRR+CP F
Sbjct: 459 KGIDFRVLPFGAGRRVCPGAHF 524
>gb|BJ549009.1|BJ549009 BJ549009 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal38d04 3', mRNA sequence
Length = 552
Score = 126 bits (270), Expect(2) = 6e-038
Identities = 46/75 (61%), Positives = 59/75 (78%)
Frame = +2 / -1
Query: 284 HSLSYLKAVVKETLRLHMPAPLLVPHLSMADCTIQGYTIPSGTRTIVNSWALARDPSCWE 463
+++ YL+ V+KE+LRLH APLL PHL MADC I GY +P+GTR +VN+WA+ RDPS WE
Sbjct: 552 NNMXYLRXVIKESLRLHPVAPLLAPHLXMADCIIDGYIVPAGTRVVVNAWAIGRDPSSWE 373
Query: 464 RAEEFMPERFMEGGS 508
EEF+PERF + GS
Sbjct: 372 YPEEFIPERFTDEGS 328
Score = 50.6 bits (104), Expect(2) = 6e-038
Identities = 17/25 (68%), Positives = 21/25 (84%)
Frame = +2 / -1
Query: 530 KGNDFQYIPFGAGRRMCPAISFATA 604
KGNDFQ++PFGAGRRMCP ++ A
Sbjct: 309 KGNDFQFLPFGAGRRMCPGMNLGIA 235
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 356,532,889
Number of Sequences: 312970
Number of extensions: 7719826
Number of successful extensions: 179496
Number of sequences better than 1.0e-020: 191
length of database: 58,378,179
effective HSP length: 51
effective length of database: 42,416,709
effective search space used: 6447339768
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)