TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3848767.2.1
(1467 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BI950636.1|BI950636 HVSMEl0021N14f Hordeum vulgare spike... 195 4e-089
gb|CK122888.1|CK122888 BES1824101b11 BES1824 Hordeum vulgar... 147 9e-086
emb|Z97023.1|HVZ97023 Hordeum vulgare mRNA encoding cystein... 110 6e-082
gb|BF256720.2|BF256720 HVSMEf0010N02f Hordeum vulgare seedl... 196 2e-078
gb|U19359.1|HVU19359 Hordeum vulgare cysteine proteinase EP... 115 6e-077
gb|U19384.1|HVU19384 Hordeum vulgare cysteine proteinase EP... 115 6e-077
gb|BU979600.1|BU979600 HA16K22r HA Hordeum vulgare subsp. v... 154 9e-077
gb|CA018842.1|CA018842 HV09N03r HV Hordeum vulgare subsp. v... 142 5e-074
gb|CA018921.1|CA018921 HV10A20r HV Hordeum vulgare subsp. v... 140 4e-072
gb|BG415364.1|BG415364 HVSMEk0006D05f Hordeum vulgare testa... 104 1e-071
emb|A98645.1| Sequence 1 from Patent WO9910500 223 7e-071
gb|BJ472680.1|BJ472680 BJ472680 K. Sato unpublished cDNA li... 147 1e-069
gb|CA007710.1|CA007710 HU08N05r HU Hordeum vulgare subsp. v... 188 2e-069
gb|CA018792.1|CA018792 HV09K16r HV Hordeum vulgare subsp. v... 93 4e-068
gb|BI778206.2|BI778206 EBro07_SQ002_I12_R root, 3 week, red... 199 5e-068
gb|BG414929.1|BG414929 HVSMEk0004E19f Hordeum vulgare testa... 144 9e-068
gb|AV923091.1|AV923091 AV923091 K. Sato unpublished cDNA li... 152 8e-067
gb|CA015084.1|CA015084 HT13D10r HT Hordeum vulgare subsp. v... 199 4e-066
gb|BU995743.1|BU995743 HM11D16r HM Hordeum vulgare subsp. v... 199 2e-065
gb|BE420653.1|BE420653 HWM001.B06 ITEC HWM Barley Leaf Libr... 170 3e-064
gb|BM815947.1|BM815947 HC01D05_T3.ab1 HC Hordeum vulgare su... 203 1e-062
gb|AF134153.1|AF134153 Hordeum vulgare cysteine protease mR... 143 9e-062
gb|CA013849.1|CA013849 HT09K13r HT Hordeum vulgare subsp. v... 93 9e-062
emb|Z97021.1|HVZ97021 Hordeum vulgare gene encoding cystein... 84 2e-061
gb|BJ472478.1|BJ472478 BJ472478 K. Sato unpublished cDNA li... 104 8e-061
gb|BG414819.1|BG414819 HVSMEk0003N11f Hordeum vulgare testa... 119 1e-059
gb|BI951599.1|BI951599 HVSMEm0001J09f Hordeum vulgare green... 104 2e-059
gb|BQ471297.1|BQ471297 HV02B01r HV Hordeum vulgare subsp. v... 115 2e-058
gb|CA008506.1|CA008506 HU11C21r HU Hordeum vulgare subsp. v... 199 5e-058
gb|BJ470713.1|BJ470713 BJ470713 K. Sato unpublished cDNA li... 104 6e-058
gb|CA020367.1|CA020367 HZ36B11r HZ Hordeum vulgare subsp. v... 104 1e-056
gb|BQ464939.1|BQ464939 HU02D03r HU Hordeum vulgare subsp. v... 101 1e-056
emb|Z97022.1|HVZ97022 Hordeum vulgare gene encoding cystein... 67 1e-056
gb|BQ472689.1|BQ472689 HB01M15r BC Hordeum vulgare subsp. v... 199 2e-056
gb|BG365693.2|BG365693 HVSMEi0003M06f Hordeum vulgare 20 DA... 104 2e-055
gb|BG343507.1|BG343507 HVSMEg0005P07f Hordeum vulgare pre-a... 113 7e-055
gb|AV833271.1|AV833271 AV833271 K. Sato unpublished cDNA li... 166 1e-054
gb|BJ470567.1|BJ470567 BJ470567 K. Sato unpublished cDNA li... 176 1e-054
gb|BQ472128.1|BQ472128 HV04H20r HV Hordeum vulgare subsp. v... 115 1e-051
gb|BJ470862.1|BJ470862 BJ470862 K. Sato unpublished cDNA li... 203 3e-051
gb|BJ472733.1|BJ472733 BJ472733 K. Sato unpublished cDNA li... 203 3e-051
gb|BJ472765.1|BJ472765 BJ472765 K. Sato unpublished cDNA li... 203 3e-051
gb|CA012821.1|CA012821 HT06I19r HT Hordeum vulgare subsp. v... 100 5e-051
gb|BF628689.3|BF628689 HVSMEb0007C07f Hordeum vulgare seedl... 102 1e-050
gb|AF134152.1|AF134152 Hordeum vulgare cysteine protease mR... 129 1e-050
gb|BI953545.1|BI953545 HVSMEm0013C14f Hordeum vulgare green... 199 3e-050
gb|BU983904.1|BU983904 HA31G11r HA Hordeum vulgare subsp. v... 199 4e-050
gb|CA031300.1|CA031300 HX09I24r HX Hordeum vulgare subsp. v... 101 2e-049
gb|BG415734.2|BG415734 HVSMEk0007K06f Hordeum vulgare testa... 81 4e-049
gb|BI952590.1|BI952590 HVSMEm0007B06f Hordeum vulgare green... 100 4e-049
gb|BQ756369.1|BQ756369 EBem08_SQ001_L07_R embryo, 40 DPA, n... 195 6e-049
gb|BQ471157.1|BQ471157 HV01F03T HV Hordeum vulgare subsp. v... 111 1e-048
gb|CA025023.1|CA025023 HZ51A03r HZ Hordeum vulgare subsp. v... 104 2e-048
gb|BG415730.2|BG415730 HVSMEk0007J21f Hordeum vulgare testa... 104 2e-047
gb|AL503956.1|AL503956 AL503956 Hordeum vulgare Barke roots... 104 8e-047
gb|AV927641.1|AV927641 AV927641 K. Sato unpublished cDNA li... 69 2e-046
gb|AL504152.1|AL504152 AL504152 Hordeum vulgare Barke roots... 100 3e-046
gb|BG366388.1|BG366388 HVSMEi0006O03f Hordeum vulgare 20 DA... 166 3e-046
gb|BF267712.2|BF267712 HV_CEa0018K21f Hordeum vulgare seedl... 183 2e-045
emb|AJ278817.1|HVU278817 Hordeum vulgare partial mRNA for p... 112 3e-045
gb|BQ471792.1|BQ471792 HV03H22r HV Hordeum vulgare subsp. v... 104 1e-044
gb|BF624099.3|BF624099 HVSMEa0009I02f Hordeum vulgare seedl... 98 2e-043
gb|CB878309.1|CB878309 HP08B01T HP Hordeum vulgare subsp. v... 170 2e-041
gb|BE558276.2|BE558276 HV_CEb0017A19f Hordeum vulgare seedl... 90 4e-041
gb|BG365210.2|BG365210 HVSMEi0001M14f Hordeum vulgare 20 DA... 66 8e-041
gb|AV922852.1|AV922852 AV922852 K. Sato unpublished cDNA li... 68 1e-040
gb|CA026404.1|CA026404 HZ55N04r HZ Hordeum vulgare subsp. v... 104 1e-040
gb|BG416013.1|BG416013 HVSMEk0009G22f Hordeum vulgare testa... 98 1e-040
gb|AV925389.1|AV925389 AV925389 K. Sato unpublished cDNA li... 88 2e-040
gb|AL505477.1|AL505477 AL505477 Hordeum vulgare Barke roots... 75 3e-040
tpe|BN000093.1|HVA000093 TPA: Hordeum vulgare mRNA for a se... 85 3e-040
gb|AV915782.1|AV915782 AV915782 K. Sato unpublished cDNA li... 155 3e-040
gb|BF267048.2|BF267048 HV_CEa0016M18f Hordeum vulgare seedl... 76 4e-039
gb|BJ464204.1|BJ464204 BJ464204 K. Sato unpublished cDNA li... 114 1e-038
gb|BE422216.1|BE422216 HWM021cF.08r ITEC HWM Barley Leaf Li... 78 1e-038
gb|BQ760974.1|BQ760974 EBro03_SQ004_A03_R root, 3 week, wat... 160 1e-038
gb|CA008921.1|CA008921 HU12I16r HU Hordeum vulgare subsp. v... 81 2e-038
gb|BI777572.2|BI777572 EBro04_SQ001_K02_R root, 3 week, sal... 116 3e-038
gb|AL501368.1|AL501368 AL501368 Hordeum vulgare Barke roots... 96 5e-038
gb|CA017567.1|CA017567 HV05J07r HV Hordeum vulgare subsp. v... 93 5e-038
gb|BQ664085.1|BQ664085 HV01L06w HV Hordeum vulgare subsp. v... 97 1e-037
gb|BI953873.1|BI953873 HVSMEm0015C07f Hordeum vulgare green... 71 2e-037
gb|BM096938.2|BM096938 EBpi07_SQ001_N17_R pistil, 12 DPA, n... 98 3e-037
gb|CA001622.1|CA001622 HS05B16r HS Hordeum vulgare subsp. v... 101 4e-037
gb|CB876878.1|CB876878 HP02L18T HP Hordeum vulgare subsp. v... 111 8e-037
gb|BF256849.3|BF256849 HVSMEf0011C24f Hordeum vulgare seedl... 151 1e-036
gb|CA027103.1|CA027103 HZ57O09r HZ Hordeum vulgare subsp. v... 101 2e-036
gb|CB882748.1|CB882748 HL02L21w HL Hordeum vulgare subsp. v... 115 2e-036
gb|CB884207.1|CB884207 HV11M07r HV Hordeum vulgare subsp. v... 111 2e-036
gb|BJ466665.1|BJ466665 BJ466665 K. Sato unpublished cDNA li... 139 3e-036
gb|BM816472.1|BM816472 HB106F05_SK.ab1 HB Hordeum vulgare s... 85 4e-036
gb|BJ468904.1|BJ468904 BJ468904 K. Sato unpublished cDNA li... 152 5e-036
gb|BF256372.2|BF256372 HVSMEf0009G12f Hordeum vulgare seedl... 81 2e-035
gb|BG345120.1|BG345120 HVSMEg0018M07f Hordeum vulgare pre-a... 150 2e-035
gb|BQ467976.1|BQ467976 HR01I12r HR Hordeum vulgare subsp. v... 81 3e-035
gb|AV913754.1|AV913754 AV913754 K. Sato unpublished cDNA li... 70 5e-035
gb|BF626679.2|BF626679 HVSMEb0001A22f Hordeum vulgare seedl... 66 6e-035
gb|BF627029.3|BF627029 HVSMEb0002A10f Hordeum vulgare seedl... 69 1e-034
gb|CB882606.1|CB882606 HL02F15w HL Hordeum vulgare subsp. v... 81 2e-033
gb|BG300931.1|BG300931 HVSMEb0019A03f Hordeum vulgare seedl... 100 2e-033
gb|AV933415.1|AV933415 AV933415 K. Sato unpublished cDNA li... 66 3e-033
gb|AV928207.1|AV928207 AV928207 K. Sato unpublished cDNA li... 141 1e-032
gb|AV928208.1|AV928208 AV928208 K. Sato unpublished cDNA li... 141 1e-032
gb|BJ468818.1|BJ468818 BJ468818 K. Sato unpublished cDNA li... 141 1e-032
gb|BJ468819.1|BJ468819 BJ468819 K. Sato unpublished cDNA li... 141 1e-032
gb|AV933128.1|AV933128 AV933128 K. Sato unpublished cDNA li... 66 2e-032
gb|BU999912.1|BU999912 HS16O03u HS Hordeum vulgare subsp. v... 82 2e-032
gb|BE421352.1|BE421352 HWM008.D09 ITEC HWM Barley Leaf Libr... 139 4e-032
gb|AV931616.1|AV931616 AV931616 K. Sato unpublished cDNA li... 72 4e-032
gb|AV929504.1|AV929504 AV929504 K. Sato unpublished cDNA li... 72 4e-032
gb|CB876932.1|CB876932 HP02O19T HP Hordeum vulgare subsp. v... 72 4e-032
gb|CB878231.1|CB878231 HP07M15T HP Hordeum vulgare subsp. v... 72 4e-032
gb|BI959700.1|BI959700 HVSMEn0020N17f Hordeum vulgare rachi... 114 5e-032
gb|BG299613.1|BG299613 HVSMEa0021A20f Hordeum vulgare seedl... 65 5e-032
gb|CB879599.1|CB879599 HP02O19w HP Hordeum vulgare subsp. v... 72 6e-032
gb|CB879132.1|CB879132 HP11A19T HP Hordeum vulgare subsp. v... 96 1e-031
gb|AL508065.1|AL508065 AL508065 Hordeum vulgare Barke devel... 85 2e-031
gb|BF618525.2|BF618525 HVSMEc0005O22f Hordeum vulgare seedl... 99 2e-031
gb|BF630201.3|BF630201 HVSMEb0008E18f Hordeum vulgare seedl... 85 2e-031
gb|CB879561.1|CB879561 HP02L18w HP Hordeum vulgare subsp. v... 67 2e-031
gb|AV931213.1|AV931213 AV931213 K. Sato unpublished cDNA li... 69 3e-031
gb|AV930489.1|AV930489 AV930489 K. Sato unpublished cDNA li... 69 3e-031
gb|CA008020.1|CA008020 HU09K20r HU Hordeum vulgare subsp. v... 65 3e-031
gb|BQ472247.1|BQ472247 HV04N08r HV Hordeum vulgare subsp. v... 136 4e-031
gb|BI956727.1|BI956727 HVSMEn0005A04f Hordeum vulgare rachi... 108 4e-031
gb|BG365631.1|BG365631 HVSMEi0003H23f Hordeum vulgare 20 DA... 85 4e-031
gb|BF629685.3|BF629685 HVSMEb0013C10f Hordeum vulgare seedl... 99 4e-031
gb|CB882596.1|CB882596 HL02F04w HL Hordeum vulgare subsp. v... 135 5e-031
gb|BQ471145.1|BQ471145 HV01D01T HV Hordeum vulgare subsp. v... 81 6e-031
gb|CA019917.1|CA019917 HV13L09r HV Hordeum vulgare subsp. v... 81 1e-030
gb|BU974102.1|BU974102 HB26O11r BC Hordeum vulgare subsp. v... 83 1e-030
gb|BI954523.1|BI954523 HVSMEm0018G18f Hordeum vulgare green... 134 1e-030
gb|BI948364.1|BI948364 HVSMEl0009E04f Hordeum vulgare spike... 84 1e-030
gb|CB876962.1|CB876962 HP03B02T HP Hordeum vulgare subsp. v... 85 1e-030
gb|AV931203.1|AV931203 AV931203 K. Sato unpublished cDNA li... 69 3e-030
gb|CD663813.1|CD663813 UCRHV18_06ch09_b1 Drought-stressed D... 91 3e-030
gb|BJ465274.1|BJ465274 BJ465274 K. Sato unpublished cDNA li... 89 3e-030
gb|AV930959.1|AV930959 AV930959 K. Sato unpublished cDNA li... 69 4e-030
gb|BF263379.2|BF263379 HV_CEa0006J12f Hordeum vulgare seedl... 65 4e-030
gb|CB884194.1|CB884194 HV08J05u HV Hordeum vulgare subsp. v... 80 4e-030
gb|BF258102.2|BF258102 HVSMEf0014M15f Hordeum vulgare seedl... 80 5e-030
gb|CA021721.1|CA021721 HZ40O14r HZ Hordeum vulgare subsp. v... 125 6e-030
gb|BQ767647.1|BQ767647 EBro08_SQ009_P12_R root, 3 week, dro... 132 6e-030
gb|AV931801.1|AV931801 AV931801 K. Sato unpublished cDNA li... 67 1e-029
gb|BQ659858.1|BQ659858 HF01P06w HF Hordeum vulgare subsp. v... 89 2e-029
gb|BI960036.1|BI960036 HVSMEn0022P09f Hordeum vulgare rachi... 113 2e-029
gb|BF258336.3|BF258336 HVSMEf0015H07f Hordeum vulgare seedl... 85 2e-029
gb|CA028010.1|CA028010 HZ60L15r HZ Hordeum vulgare subsp. v... 85 2e-029
gb|CA025775.1|CA025775 HZ53B18r HZ Hordeum vulgare subsp. v... 66 2e-029
gb|BF254700.2|BF254700 HVSMEf0004M09f Hordeum vulgare seedl... 85 3e-029
gb|AV923635.1|AV923635 AV923635 K. Sato unpublished cDNA li... 85 3e-029
gb|BJ547443.1|BJ547443 BJ547443 K. Sato unpublished cDNA li... 70 4e-029
gb|AV920897.1|AV920897 AV920897 K. Sato unpublished cDNA li... 129 4e-029
gb|AJ435037.1|AJ435037 AJ435037 S00002 Hordeum vulgare subs... 81 5e-029
gb|BQ464940.1|BQ464940 HU02D04r HU Hordeum vulgare subsp. v... 128 6e-029
gb|BE411632.1|BE411632 ISC007.F05F990709 ITEC ISC Barley Le... 128 8e-029
gb|BM098954.2|BM098954 EBpi05_SQ002_I16_R pistil, 8 DPA, no... 111 8e-029
gb|BU968975.1|BU968975 HB10C12r BC Hordeum vulgare subsp. v... 127 2e-028
gb|BI954262.1|BI954262 HVSMEm0016O06f Hordeum vulgare green... 85 3e-028
gb|BQ755499.1|BQ755499 EBed07_SQ002_E20_R endosperm, 28 DPA... 94 3e-028
gb|BE195255.3|BE195255 HVSMEh0088L13f Hordeum vulgare 5-45 ... 78 4e-028
gb|BJ547664.1|BJ547664 BJ547664 K. Sato unpublished cDNA li... 78 4e-028
gb|BG367222.2|BG367222 HVSMEi0011F17f Hordeum vulgare 20 DA... 85 9e-028
gb|AV931202.1|AV931202 AV931202 K. Sato unpublished cDNA li... 69 9e-028
gb|AV915812.1|AV915812 AV915812 K. Sato unpublished cDNA li... 89 1e-027
gb|CA024413.1|CA024413 HZ49D23r HZ Hordeum vulgare subsp. v... 112 2e-027
gb|BG365314.2|BG365314 HVSMEi0002E03f Hordeum vulgare 20 DA... 70 2e-027
gb|AL505111.1|AL505111 AL505111 Hordeum vulgare Barke roots... 65 7e-027
gb|BQ471140.1|BQ471140 HV01B20T HV Hordeum vulgare subsp. v... 111 8e-027
gb|CB884128.1|CB884128 HZ55P09r HZ Hordeum vulgare subsp. v... 110 8e-027
gb|BE196180.3|BE196180 HVSMEh0091J08f Hordeum vulgare 5-45 ... 72 1e-026
gb|BQ758701.1|BQ758701 EBma07_SQ002_F15_R maternal, 21 DPA,... 74 1e-026
gb|BU994426.1|BU994426 HM07A13r HM Hordeum vulgare subsp. v... 58 2e-026
gb|BF625661.2|BF625661 HVSMEa0013C18f Hordeum vulgare seedl... 81 2e-026
gb|BF256075.2|BF256075 HVSMEf0008K16f Hordeum vulgare seedl... 78 4e-026
gb|BU998940.1|BU998940 HI12K08r HI Hordeum vulgare subsp. v... 78 4e-026
gb|BJ549414.1|BJ549414 BJ549414 K. Sato unpublished cDNA li... 78 4e-026
gb|BU998941.1|BU998941 HI12K12r HI Hordeum vulgare subsp. v... 78 4e-026
gb|BF266682.2|BF266682 HV_CEa0015L24f Hordeum vulgare seedl... 78 4e-026
gb|BQ661802.1|BQ661802 HP01F19w HP Hordeum vulgare subsp. v... 67 4e-026
gb|CA028182.1|CA028182 HZ61D19r HZ Hordeum vulgare subsp. v... 78 4e-026
gb|BQ467932.1|BQ467932 HR01G07r HR Hordeum vulgare subsp. v... 78 4e-026
gb|BQ465404.1|BQ465404 HU03I21r HU Hordeum vulgare subsp. v... 118 6e-026
gb|BF260192.2|BF260192 HVSMEf0021F15f Hordeum vulgare seedl... 85 1e-025
gb|AL499932.1|AL499932 AL499932 Hordeum vulgare Barke etiol... 51 1e-025
gb|BF626776.2|BF626776 HVSMEb0001E23f Hordeum vulgare seedl... 65 1e-025
gb|AL500385.1|AL500385 AL500385 Hordeum vulgare Barke etiol... 69 2e-025
gb|AV929742.1|AV929742 AV929742 K. Sato unpublished cDNA li... 69 2e-025
gb|CB877142.1|CB877142 HP03L09T HP Hordeum vulgare subsp. v... 78 2e-025
gb|AV915511.1|AV915511 AV915511 K. Sato unpublished cDNA li... 78 3e-025
gb|AV931862.1|AV931862 AV931862 K. Sato unpublished cDNA li... 51 3e-025
gb|AL499864.1|AL499864 AL499864 Hordeum vulgare Barke etiol... 69 4e-025
gb|AV930960.1|AV930960 AV930960 K. Sato unpublished cDNA li... 69 6e-025
gb|BE196222.3|BE196222 HVSMEh0091L06f Hordeum vulgare 5-45 ... 72 7e-025
gb|BQ766576.1|BQ766576 EBro08_SQ006_B17_R root, 3 week, dro... 75 1e-024
gb|BF256657.2|BF256657 HVSMEf0010J23f Hordeum vulgare seedl... 105 2e-024
gb|BI953275.1|BI953275 HVSMEm0011P16f Hordeum vulgare green... 69 2e-024
gb|BE216298.2|BE216298 HV_CEb0010C01f Hordeum vulgare seedl... 96 2e-024
gb|BM442197.2|BM442197 EBan01_SQ002_I02_R anther, yellow st... 69 2e-024
gb|BM097293.2|BM097293 EBro01_SQ003_O17_R root, 3 week, hyd... 79 3e-024
gb|BF631617.2|BF631617 HVSMEb0016K07f Hordeum vulgare seedl... 81 4e-024
gb|BG300776.1|BG300776 HVSMEb0018G01f Hordeum vulgare seedl... 69 5e-024
gb|AV922630.1|AV922630 AV922630 K. Sato unpublished cDNA li... 48 7e-024
gb|BF267713.2|BF267713 HV_CEa0018K22f Hordeum vulgare seedl... 79 8e-024
gb|BE216623.2|BE216623 HV_CEb0010P19f Hordeum vulgare seedl... 81 1e-023
gb|AL500308.1|AL500308 AL500308 Hordeum vulgare Barke etiol... 68 1e-023
gb|AV927476.1|AV927476 AV927476 K. Sato unpublished cDNA li... 69 1e-023
gb|CB879458.1|CB879458 HP02F10w HP Hordeum vulgare subsp. v... 51 1e-023
gb|AV931838.1|AV931838 AV931838 K. Sato unpublished cDNA li... 51 1e-023
gb|BE213788.1|BE213788 HV_CEb0001E12f Hordeum vulgare seedl... 81 1e-023
gb|BE519597.3|BE519597 HV_CEb0016F05f Hordeum vulgare seedl... 85 1e-023
gb|BE421234.1|BE421234 HWM007.B11 ITEC HWM Barley Leaf Libr... 79 1e-023
gb|BF629205.2|BF629205 HVSMEb0010F04f Hordeum vulgare seedl... 62 2e-023
gb|BQ762725.1|BQ762725 EBro02_SQ004_J24 _R root, 3 week, hy... 110 2e-023
gb|AV925114.1|AV925114 AV925114 K. Sato unpublished cDNA li... 78 2e-023
gb|BI953159.1|BI953159 HVSMEm0011G07f Hordeum vulgare green... 65 2e-023
gb|BF631129.3|BF631129 HVSMEb0015A23f Hordeum vulgare seedl... 78 3e-023
gb|AV912750.1|AV912750 AV912750 K. Sato unpublished cDNA li... 109 4e-023
gb|CB882564.1|CB882564 HL02D14w HL Hordeum vulgare subsp. v... 109 4e-023
gb|BJ547064.1|BJ547064 BJ547064 K. Sato unpublished cDNA li... 70 4e-023
gb|AL499690.1|AL499690 AL499690 Hordeum vulgare Barke etiol... 69 5e-023
gb|BQ768681.1|BQ768681 EBro08_SQ012_K07_R root, 3 week, dro... 95 9e-023
gb|AL505180.1|AL505180 AL505180 Hordeum vulgare Barke roots... 100 1e-022
gb|AL501265.1|AL501265 AL501265 Hordeum vulgare Barke roots... 80 1e-022
gb|AV929283.1|AV929283 AV929283 K. Sato unpublished cDNA li... 60 2e-022
gb|BJ471824.1|BJ471824 BJ471824 K. Sato unpublished cDNA li... 56 2e-022
gb|BQ768365.1|BQ768365 EBro08_SQ011_B17_R root, 3 week, dro... 85 2e-022
gb|CA008091.1|CA008091 HU09N24r HU Hordeum vulgare subsp. v... 65 2e-022
gb|BJ470509.1|BJ470509 BJ470509 K. Sato unpublished cDNA li... 90 2e-022
gb|AV927688.1|AV927688 AV927688 K. Sato unpublished cDNA li... 67 2e-022
gb|BJ451093.1|BJ451093 BJ451093 K. Sato unpublished cDNA li... 106 2e-022
gb|AV929868.1|AV929868 AV929868 K. Sato unpublished cDNA li... 51 3e-022
gb|BQ664005.1|BQ664005 HV01B20w HV Hordeum vulgare subsp. v... 76 3e-022
gb|BF630395.3|BF630395 HVSMEb0009B06f Hordeum vulgare seedl... 72 4e-022
gb|BF267209.2|BF267209 HV_CEa0017E07f Hordeum vulgare seedl... 78 4e-022
gb|CB884132.1|CB884132 HZ57N15r HZ Hordeum vulgare subsp. v... 102 4e-022
gb|BQ465296.1|BQ465296 HU03D12r HU Hordeum vulgare subsp. v... 65 4e-022
gb|AV930734.1|AV930734 AV930734 K. Sato unpublished cDNA li... 51 5e-022
gb|BM816045.1|BM816045 HC02E03_T3.ab1 HC Hordeum vulgare su... 66 6e-022
gb|AV922923.1|AV922923 AV922923 K. Sato unpublished cDNA li... 80 6e-022
gb|BI958441.1|BI958441 HVSMEn0015A05f Hordeum vulgare rachi... 97 6e-022
gb|BG415097.2|BG415097 HVSMEk0005C06f Hordeum vulgare testa... 71 1e-021
gb|BG309012.1|BG309012 HVSMEc0001G16f Hordeum vulgare seedl... 100 2e-021
gb|BM372047.2|BM372047 EBma08_SQ004_M20_R maternal, 28 DPA,... 63 2e-021
gb|BM815999.1|BM815999 HB105H04_SK.ab1 HB Hordeum vulgare s... 104 2e-021
gb|BM816473.1|BM816473 HB03A05_T3.ab1 HB Hordeum vulgare su... 65 2e-021
gb|AL505543.1|AL505543 AL505543 Hordeum vulgare Barke roots... 77 2e-021
gb|BE420740.1|BE420740 HWM002.A09 ITEC HWM Barley Leaf Libr... 50 2e-021
gb|BF264026.2|BF264026 HV_CEa0008F09f Hordeum vulgare seedl... 78 3e-021
gb|CA024346.1|CA024346 HZ49A22r HZ Hordeum vulgare subsp. v... 100 3e-021
gb|AV926966.1|AV926966 AV926966 K. Sato unpublished cDNA li... 69 3e-021
gb|BF263371.2|BF263371 HV_CEa0006J04f Hordeum vulgare seedl... 65 3e-021
gb|BF264359.2|BF264359 HV_CEa0009D10f Hordeum vulgare seedl... 85 4e-021
gb|BE454433.2|BE454433 HVSMEh0094G24f Hordeum vulgare 5-45 ... 65 4e-021
gb|BF263326.2|BF263326 HV_CEa0006H07f Hordeum vulgare seedl... 85 5e-021
gb|AV931490.1|AV931490 AV931490 K. Sato unpublished cDNA li... 46 6e-021
gb|BF264622.1|BF264622 HV_CEa0009O18f Hordeum vulgare seedl... 72 1e-020
>gb|BI950636.1|BI950636 HVSMEl0021N14f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0021N14f, mRNA sequence
Length = 882
Score = 195 bits (421), Expect(3) = 4e-089
Identities = 76/116 (65%), Positives = 92/116 (79%)
Frame = -2 / +3
Query: 653 KNEKVATIDGLVEVASNNETALQEAVAIQPVSVAIDAGGRAFQHYSSGIFNGPCGTSLDH 474
KN KV +IDG +V N+E +LQ+AVA PVSVAI+AGGR FQ Y SG+F+G CGT LDH
Sbjct: 309 KNAKVVSIDGFEDVPENDEKSLQKAVAHHPVSVAIEAGGREFQLYHSGVFSGRCGTQLDH 488
Query: 473 GVTAVGYGSESGKDYWIVKNSWSASWGEAGYIRMRRNVPRPTGKCGIAMDASYPVK 306
GV AVGYG+E+GKDYWIV+NSW +WGEAGY+RM RN+ +GKCGI M +SYP K
Sbjct: 489 GVVAVGYGTENGKDYWIVRNSWGPNWGEAGYLRMERNINVTSGKCGITMMSSYPTK 656
Score = 106 bits (227), Expect(3) = 3e-038
Identities = 44/65 (67%), Positives = 48/65 (73%)
Frame = +1 / -3
Query: 460 TAVTPWSRLVPHGPLKMPEL*CWNARPPASMATLTGWIATASCSAVSLLLATSTNPSMVA 639
TA TPWS VPH PLK PE * WN+RPPASMATLTGW ATA CS S TS+ PSM+
Sbjct: 502 TATTPWSSCVPHLPLKTPEW*SWNSRPPASMATLTGW*ATAFCSDFSSFSGTSSKPSMLT 323
Query: 640 TFSFF 654
TF+FF
Sbjct: 322 TFAFF 308
Score = 99.1 bits (210), Expect(3) = 4e-089
Identities = 34/57 (59%), Positives = 46/57 (80%)
Frame = -2 / +3
Query: 956 LPDAIDWRQLGAVTEVKDQQQCGGCWAFSAVAAIEGVNAIATGNLVSLSEQEIIDCD 786
LP+ +DWR+ GAV VK+Q QCG CWAFSAV+ +E +N I TG +V+LSEQE+++CD
Sbjct: 3 LPEGVDWREKGAVAPVKNQGQCGSCWAFSAVSTVESINQIVTGEMVTLSEQELVECD 173
Score = 73.9 bits (155), Expect(3) = 4e-089
Identities = 27/53 (50%), Positives = 37/53 (69%)
Frame = -2 / +3
Query: 794 DCDAQDSGCDGGQMENAFRFVIGNGGIDTEADYPFIGTDGTCDASKEKNEKVA 636
D + Q SGC+GG M++AF F+I NGGIDTE DYP+ DG CD ++ + V+
Sbjct: 171 DINGQSSGCNGGLMDDAFEFIIKNGGIDTEDDYPYKAVDGRCDVLRKNAKVVS 329
Score = 49.6 bits (102), Expect(3) = 3e-038
Identities = 27/56 (48%), Positives = 32/56 (57%)
Frame = +1 / -3
Query: 652 FSLLASQVPSVPMKG*SASVSIPPLPMTNRNAFSICPPSQPLSWASQSMISCSDSD 819
F L S +PS + G*S+SVS+PP M N A SI PP QPL S + S SD
Sbjct: 313 FFLRTSHLPSTAL*G*SSSVSMPPFFMMNSKASSIRPPLQPLLCPLMSHSTSSCSD 146
Score = 41.4 bits (84), Expect(3) = 3e-038
Identities = 20/39 (51%), Positives = 22/39 (56%)
Frame = +1 / -3
Query: 313 G*DASMAMPHLPVGRGTLRLMRM*PASPQLALHEFFTIQ 429
G D M +PH P+ LR MR PASPQ HE TIQ
Sbjct: 649 GYDDIMVIPHFPLVTLMLRSMRRYPASPQFGPHELRTIQ 533
>gb|CK122888.1|CK122888 BES1824101b11 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010B111 5-PRIME, mRNA sequence
Length = 785
Score = 147 bits (315), Expect(4) = 9e-086
Identities = 57/87 (65%), Positives = 69/87 (79%)
Frame = -2 / +1
Query: 653 KNEKVATIDGLVEVASNNETALQEAVAIQPVSVAIDAGGRAFQHYSSGIFNGPCGTSLDH 474
KN KV +IDG +V N+E +LQ+AVA PVSVAI+AGGR FQ Y SG+F+G CGT L H
Sbjct: 499 KNAKVVSIDGFEDVPENDEKSLQKAVAHHPVSVAIEAGGREFQLYHSGVFSGRCGTQLXH 678
Query: 473 GVTAVGYGSESGKDYWIVKNSWSASWG 393
GV AVGYG+E+GKDYWIV+NSW +WG
Sbjct: 679 GVVAVGYGTENGKDYWIVRNSWGPNWG 759
Score = 101 bits (216), Expect(4) = 9e-086
Identities = 35/58 (60%), Positives = 48/58 (82%)
Frame = -2 / +1
Query: 959 DLPDAIDWRQLGAVTEVKDQQQCGGCWAFSAVAAIEGVNAIATGNLVSLSEQEIIDCD 786
+LP+A+DWR+ GAV VK+Q QCG CWAFSAV+ +E +N I TG +V+LSEQE+++CD
Sbjct: 190 ELPEAVDWREKGAVAPVKNQGQCGSCWAFSAVSTVESINQIVTGEMVTLSEQELVECD 363
Score = 100 bits (214), Expect(3) = 2e-033
Identities = 43/65 (66%), Positives = 47/65 (72%)
Frame = +1 / -1
Query: 460 TAVTPWSRLVPHGPLKMPEL*CWNARPPASMATLTGWIATASCSAVSLLLATSTNPSMVA 639
TA TP S VPH PLK PE * WN+RPPASMATLTGW ATA CS S TS+ PSM+
Sbjct: 692 TATTPXSSCVPHLPLKTPEW*SWNSRPPASMATLTGW*ATAFCSDFSSFSGTSSKPSMLT 513
Query: 640 TFSFF 654
TF+FF
Sbjct: 512 TFAFF 498
Score = 73.9 bits (155), Expect(4) = 9e-086
Identities = 27/53 (50%), Positives = 37/53 (69%)
Frame = -2 / +1
Query: 794 DCDAQDSGCDGGQMENAFRFVIGNGGIDTEADYPFIGTDGTCDASKEKNEKVA 636
D + Q SGC+GG M++AF F+I NGGIDTE DYP+ DG CD ++ + V+
Sbjct: 361 DINGQSSGCNGGLMDDAFEFIIKNGGIDTEDDYPYKAVDGRCDVLRKNAKVVS 519
Score = 55.6 bits (115), Expect(3) = 2e-033
Identities = 29/56 (51%), Positives = 30/56 (53%)
Frame = +1 / -1
Query: 787 SQSMISCSDSDTRLPVAIAFTPSMAATAENAQHPPHCCWSLTSVTAPSWRQSMASG 954
S S SCSD+ T PV I S TAE AQ PH W LT TAP QS ASG
Sbjct: 362 SHSTSSCSDNVTISPVTIWLMLSTVLTAEKAQQLPHWPWFLTGATAPFSLQSTASG 195
Score = 53.3 bits (110), Expect(4) = 9e-086
Identities = 22/39 (56%), Positives = 27/39 (69%)
Frame = -2 / +1
Query: 1139 LRYIDAHNAEADAGLHTFRLGLTPFADLTLEEYRGRVLG 1023
LR++DAHNA A AG FRL + FADLT +E+R LG
Sbjct: 1 LRFVDAHNARAAAGEEGFRLAMNRFADLTNDEFRAAYLG 117
Score = 30.9 bits (61), Expect(3) = 2e-033
Identities = 17/28 (60%), Positives = 18/28 (64%)
Frame = +1 / -1
Query: 1045 SSRVRSAKGVRPRRKVWSPASASALCAS 1128
SS VRSAK RR SPA+A AL AS
Sbjct: 95 SSLVRSAKRFMARRNPSSPAAARALWAS 12
>emb|Z97023.1|HVZ97023 Hordeum vulgare mRNA encoding cysteine endopeptidase EP-A
Length = 1299
Score = 110 bits (234), Expect(6) = 6e-082
Identities = 40/58 (68%), Positives = 48/58 (82%)
Frame = -2 / +1
Query: 959 DLPDAIDWRQLGAVTEVKDQQQCGGCWAFSAVAAIEGVNAIATGNLVSLSEQEIIDCD 786
+LP A+DWRQ GAVT +KDQ QCG CWAFS + A+EG+N I TG LVSLSEQE++DCD
Sbjct: 433 NLPPAVDWRQKGAVTAIKDQGQCGSCWAFSTIVAVEGINKIRTGKLVSLSEQELMDCD 606
Score = 105 bits (225), Expect(6) = 6e-082
Identities = 43/70 (61%), Positives = 54/70 (77%)
Frame = -2 / +1
Query: 656 EKNEKVATIDGLVEVASNNETALQEAVAIQPVSVAIDAGGRAFQHYSSGIFNGPCGTSLD 477
++N + TIDG +V +N+E+ALQ+AVA QPVSVAIDA G+ FQ YS G+F G C T LD
Sbjct: 733 KENAQAVTIDGYEDVPANDESALQKAVAGQPVSVAIDASGQDFQFYSEGVFTGECSTDLD 912
Query: 476 HGVTAVGYGS 447
HGV AVGYG+
Sbjct: 913 HGVAAVGYGA 942
Score = 83.5 bits (176), Expect(6) = 6e-082
Identities = 31/52 (59%), Positives = 34/52 (65%)
Frame = -2 / +1
Query: 449 SESGKDYWIVKNSWSASWGEAGYIRMRRNVPRPTGKCGIAMDASYPVKDTYH 294
+ G YWIVKNSW WGE GYIRM+R V + G CGIAM ASYP K H
Sbjct: 943 TRDGTKYWIVKNSWGEDWGEKGYIRMQRGVSQTEGLCGIAMQASYPTKSAPH 1098
Score = 70.7 bits (148), Expect(4) = 5e-038
Identities = 34/56 (60%), Positives = 35/56 (62%)
Frame = +1 / -2
Query: 787 SQSMISCSDSDTRLPVAIAFTPSMAATAENAQHPPHCCWSLTSVTAPSWRQSMASG 954
SQSM SCSDSDT PV I PS A ENAQ PH SL +VTAP RQS A G
Sbjct: 605 SQSMSSCSDSDTSFPVLILLMPSTATIVENAQQLPHWP*SLMAVTAPFCRQSTAGG 438
Score = 69.3 bits (145), Expect(4) = 5e-038
Identities = 34/64 (53%), Positives = 40/64 (62%)
Frame = +1 / -2
Query: 460 TAVTPWSRLVPHGPLKMPEL*CWNARPPASMATLTGWIATASCSAVSLLLATSTNPSMVA 639
TA TPWSR V H P+K P * W + P AS+AT TG ATA C A S L TS+ PS+V
Sbjct: 929 TAATPWSRSVLHSPVKTPSE*NWKSWPLASIATDTGCPATAFCRADSSLAGTSS*PSIVT 750
Query: 640 TFSF 651
+F
Sbjct: 749 A*AF 738
Score = 52.4 bits (108), Expect(4) = 5e-038
Identities = 25/39 (64%), Positives = 27/39 (69%)
Frame = +1 / -2
Query: 313 G*DASMAMPHLPVGRGTLRLMRM*PASPQLALHEFFTIQ 429
G*DA MAMPH P T R + M*P SPQ + HEFFTIQ
Sbjct: 1079 G*DACMAMPHSPSVCDTPRCILM*PFSPQSSPHEFFTIQ 963
Score = 38.2 bits (77), Expect(6) = 6e-082
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = -2 / +1
Query: 731 IGNGGIDTEADYPFIGTDGTCDASKEKNEKV 639
I GI TE++YP+ G G+CD +KE + V
Sbjct: 661 IQKNGITTESNYPYQGEQGSCDQAKENAQAV 753
Score = 32.7 bits (65), Expect(6) = 6e-082
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -2 / +1
Query: 788 DAQDSGCDGGQMENAFRFVIGNG 720
+ + GCDGG M+ AF+F+ NG
Sbjct: 607 NVNNQGCDGGLMDYAFQFIQKNG 675
Score = 28.6 bits (56), Expect(6) = 6e-082
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -2 / +1
Query: 1088 FRLGLTPFADLTLEEYRGRVLG 1023
FRL L FAD+T +E+R G
Sbjct: 292 FRLALNKFADMTTDEFRRTYAG 357
Score = 22.1 bits (42), Expect(4) = 5e-038
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +3 / -1
Query: 696 VVGLGVDPAVADD 734
VVGLG DP + D+
Sbjct: 696 VVGLGGDPVLLDE 658
>gb|BF256720.2|BF256720 HVSMEf0010N02f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0010N02f, mRNA sequence
Length = 850
Score = 196 bits (423), Expect(3) = 2e-078
Identities = 77/127 (60%), Positives = 97/127 (76%)
Frame = -2 / +3
Query: 662 SKEKNEKVATIDGLVEVASNNETALQEAVAIQPVSVAIDAGGRAFQHYSSGIFNGPCGTS 483
+ +KN KV TIDG +V N+E +LQ+AVA QP+SVAI+AGGRAFQ Y SGIF G CGT+
Sbjct: 249 ANKKNAKVVTIDGYEDVPVNSEKSLQKAVANQPISVAIEAGGRAFQLYKSGIFTGTCGTA 428
Query: 482 LDHGVTAVGYGSESGKDYWIVKNSWSASWGEAGYIRMRRNVPRPTGKCGIAMDASYPVKD 303
LDHGV AVGYG+E+GKDYW+V+NSW + WGE GYIRM R + +G+CGIA+ SYP K
Sbjct: 429 LDHGVAAVGYGTENGKDYWLVRNSWGSVWGEDGYIRMERYIKASSGQCGIAVKPSYPTKT 608
Query: 302 TYHDPGT 282
+ P +
Sbjct: 609 GENPPNS 629
Score = 100 bits (214), Expect(4) = 3e-043
Identities = 41/72 (56%), Positives = 50/72 (69%)
Frame = +1 / -1
Query: 460 TAVTPWSRLVPHGPLKMPEL*CWNARPPASMATLTGWIATASCSAVSLLLATSTNPSMVA 639
TA TPWS VP P+K+P+L* WNA PPAS+ATL GW ATA C SL TS+ PSMV
Sbjct: 451 TAATPWSSAVPQVPVKIPDL*SWNALPPASIATLMGWFATAFCRLFSLFTGTSSYPSMVT 272
Query: 640 TFSFFSLLASQV 675
T +FF L + ++
Sbjct: 271 TLAFFLLASQRL 236
Score = 73.5 bits (154), Expect(3) = 2e-078
Identities = 26/41 (63%), Positives = 34/41 (82%)
Frame = -2 / +3
Query: 908 KDQQQCGGCWAFSAVAAIEGVNAIATGNLVSLSEQEIIDCD 786
KDQ CG CWAFSA+AA+EG+N I TG+++ LSEQE++D D
Sbjct: 3 KDQGGCGSCWAFSAIAAVEGINQIVTGDMIPLSEQELVD*D 125
Score = 62.9 bits (131), Expect(3) = 2e-078
Identities = 23/47 (48%), Positives = 32/47 (68%)
Frame = -2 / +3
Query: 779 DSGCDGGQMENAFRFVIGNGGIDTEADYPFIGTDGTCDASKEKNEKV 639
+ GC+GG M+ A F+I NGGID+E DYP+ D CDA+K+ + V
Sbjct: 135 NQGCNGGLMDYALEFIINNGGIDSEEDYPYKERDNRCDANKKNAKVV 275
Score = 47.3 bits (97), Expect(4) = 3e-043
Identities = 25/41 (60%), Positives = 28/41 (68%)
Frame = +1 / -1
Query: 652 FSLLASQVPSVPMKG*SASVSIPPLPMTNRNAFSICPPSQP 774
F LLASQ S+ + G*S+S SIPPL M N NA SI PP P
Sbjct: 262 FFLLASQRLSLSL*G*SSSESIPPLLMMNSNA*SIRPPLHP 140
Score = 44.1 bits (90), Expect(4) = 3e-043
Identities = 22/41 (53%), Positives = 22/41 (53%)
Frame = +1 / -1
Query: 787 SQSMISCSDSDTRLPVAIAFTPSMAATAENAQHPPHCCWSL 909
SQS SCSD PV I PS AA AE AQ P WSL
Sbjct: 124 SQSTSSCSDRGIMSPVTIWLMPSTAAIAEKAQQLPQPPWSL 2
Score = 40.0 bits (81), Expect(4) = 3e-043
Identities = 19/41 (46%), Positives = 24/41 (58%)
Frame = +1 / -1
Query: 307 FTG*DASMAMPHLPVGRGTLRLMRM*PASPQLALHEFFTIQ 429
F G*+ A+PH P+ R +RM*P+SPQ EF T Q
Sbjct: 604 FVG*EGLTAIPHCPLDALM*RSIRM*PSSPQTLPQEFLTSQ 482
>gb|U19359.1|HVU19359 Hordeum vulgare cysteine proteinase EPB1 gene, complete cds
Length = 2880
Score = 115 bits (245), Expect(4) = 6e-077
Identities = 43/62 (69%), Positives = 52/62 (83%)
Frame = -2 / +2
Query: 959 DLPDAIDWRQLGAVTEVKDQQQCGGCWAFSAVAAIEGVNAIATGNLVSLSEQEIIDCDAQ 780
DLP ++DWRQ GAVT VKDQ +CG CWAFS V ++EG+NAI TG+LVSLSEQE+IDCD
Sbjct: 1436 DLPPSVDWRQKGAVTGVKDQGKCGSCWAFSTVVSVEGINAIRTGSLVSLSEQELIDCDTA 1615
Query: 779 DS 774
D+
Sbjct: 1616 DN 1621
Score = 92.7 bits (196), Expect(4) = 6e-077
Identities = 38/64 (59%), Positives = 45/64 (70%)
Frame = -2 / +2
Query: 641 VATIDGLVEVASNNETALQEAVAIQPVSVAIDAGGRAFQHYSSGIFNGPCGTSLDHGVTA 462
V IDG +V +N+E L AVA QPVSVA++A G+AF YS G+F G CGT LDHGV
Sbjct: 1763 VVHIDGHQDVPANSEEDLARAVANQPVSVAVEASGKAFMFYSEGVFTGDCGTELDHGVAV 1942
Query: 461 VGYG 450
VGYG
Sbjct: 1943 VGYG 1954
Score = 80.8 bits (170), Expect(5) = 6e-039
Identities = 37/60 (61%), Positives = 39/60 (65%)
Frame = +1 / -1
Query: 775 LSWASQSMISCSDSDTRLPVAIAFTPSMAATAENAQHPPHCCWSLTSVTAPSWRQSMASG 954
LS SQSM SCS+ DTRLPV +A PS T ENAQ PH WSLT VTAP RQS G
Sbjct: 1620 LSAVSQSMSSCSERDTRLPVRMALMPSTDTTVENAQQLPHLPWSLTPVTAPFCRQSTDGG 1441
Score = 80.3 bits (169), Expect(4) = 6e-077
Identities = 30/48 (62%), Positives = 35/48 (72%)
Frame = -2 / +2
Query: 449 SESGKDYWIVKNSWSASWGEAGYIRMRRNVPRPTGKCGIAMDASYPVK 306
+E GK YW VKNSW SWGE GYIR+ ++ G CGIAM+ASYPVK
Sbjct: 1958 AEDGKAYWTVKNSWGPSWGEQGYIRVEKDSGASGGLCGIAMEASYPVK 2101
Score = 66.1 bits (138), Expect(5) = 6e-039
Identities = 33/65 (50%), Positives = 35/65 (53%)
Frame = +1 / -1
Query: 460 TAVTPWSRLVPHGPLKMPEL*CWNARPPASMATLTGWIATASCSAVSLLLATSTNPSMVA 639
T TPWS VP P+ P * NA P AS AT TGW ATA + SLL TS PSM
Sbjct: 1944 TTATPWSSSVPQSPVNTPSE*NMNAFPLASTATDTGWFATALARSSSLLAGTSWCPSMCT 1765
Query: 640 TFSFF 654
T F
Sbjct: 1764 TTGEF 1750
Score = 58.3 bits (121), Expect(4) = 6e-077
Identities = 20/43 (46%), Positives = 29/43 (67%)
Frame = -2 / +2
Query: 785 AQDSGCDGGQMENAFRFVIGNGGIDTEADYPFIGTDGTCDASK 657
A + GC GG M+NAF ++ NGG+ TEA YP+ GTC+ ++
Sbjct: 1613 ADNDGCQGGLMDNAFEYIKNNGGLITEAAYPYRAARGTCNVAR 1741
Score = 33.1 bits (66), Expect(5) = 6e-039
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = +1 / -1
Query: 655 SLLASQVPSVPMKG*SASVSIPPLPMTNRNAFSICPPSQP 774
+L QVP G*+ASV PPL + A S+ PP P
Sbjct: 1743 ALATLQVPLAARYG*AASVISPPLFLMYSKALSMSPPWHP 1624
Score = 28.1 bits (55), Expect(5) = 6e-039
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +1 / -1
Query: 379 M*PASPQLALHEFFTIQ 429
M*P SP HEFFT+Q
Sbjct: 2028 M*PCSPHDGPHEFFTVQ 1978
Score = 26.7 bits (52), Expect(5) = 6e-039
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = +1 / -1
Query: 310 TG*DASMAMPHLP 348
TG*DASMAMP P
Sbjct: 2097 TG*DASMAMPQRP 2059
>gb|U19384.1|HVU19384 Hordeum vulgare cysteine proteinase EPB2 gene, complete cds
Length = 2714
Score = 115 bits (245), Expect(4) = 6e-077
Identities = 43/62 (69%), Positives = 52/62 (83%)
Frame = -2 / +2
Query: 959 DLPDAIDWRQLGAVTEVKDQQQCGGCWAFSAVAAIEGVNAIATGNLVSLSEQEIIDCDAQ 780
DLP ++DWRQ GAVT VKDQ +CG CWAFS V ++EG+NAI TG+LVSLSEQE+IDCD
Sbjct: 1241 DLPPSVDWRQKGAVTGVKDQGKCGSCWAFSTVVSVEGINAIRTGSLVSLSEQELIDCDTA 1420
Query: 779 DS 774
D+
Sbjct: 1421 DN 1426
Score = 92.7 bits (196), Expect(4) = 6e-077
Identities = 38/64 (59%), Positives = 45/64 (70%)
Frame = -2 / +2
Query: 641 VATIDGLVEVASNNETALQEAVAIQPVSVAIDAGGRAFQHYSSGIFNGPCGTSLDHGVTA 462
V IDG +V +N+E L AVA QPVSVA++A G+AF YS G+F G CGT LDHGV
Sbjct: 1568 VVHIDGHQDVPANSEEDLARAVANQPVSVAVEASGKAFMFYSEGVFTGECGTELDHGVAV 1747
Query: 461 VGYG 450
VGYG
Sbjct: 1748 VGYG 1759
Score = 80.8 bits (170), Expect(5) = 7e-040
Identities = 37/60 (61%), Positives = 39/60 (65%)
Frame = +1 / -3
Query: 775 LSWASQSMISCSDSDTRLPVAIAFTPSMAATAENAQHPPHCCWSLTSVTAPSWRQSMASG 954
LS SQSM SCS+ DTRLPV +A PS T ENAQ PH WSLT VTAP RQS G
Sbjct: 1425 LSAVSQSMSSCSERDTRLPVRMALMPSTDTTVENAQQLPHLPWSLTPVTAPFCRQSTDGG 1246
Score = 80.3 bits (169), Expect(4) = 6e-077
Identities = 30/48 (62%), Positives = 35/48 (72%)
Frame = -2 / +2
Query: 449 SESGKDYWIVKNSWSASWGEAGYIRMRRNVPRPTGKCGIAMDASYPVK 306
+E GK YW VKNSW SWGE GYIR+ ++ G CGIAM+ASYPVK
Sbjct: 1763 AEDGKAYWTVKNSWGPSWGEQGYIRVEKDSGASGGLCGIAMEASYPVK 1906
Score = 68.0 bits (142), Expect(5) = 7e-040
Identities = 33/65 (50%), Positives = 36/65 (55%)
Frame = +1 / -3
Query: 460 TAVTPWSRLVPHGPLKMPEL*CWNARPPASMATLTGWIATASCSAVSLLLATSTNPSMVA 639
T TPWS VPH P+ P * NA P AS AT TGW ATA + SLL TS PS+
Sbjct: 1749 TTATPWSSSVPHSPVNTPSE*NMNAFPLASTATDTGWFATALARSSSLLAGTSWCPSICT 1570
Query: 640 TFSFF 654
T F
Sbjct: 1569 TTGEF 1555
Score = 58.3 bits (121), Expect(4) = 6e-077
Identities = 20/43 (46%), Positives = 29/43 (67%)
Frame = -2 / +2
Query: 785 AQDSGCDGGQMENAFRFVIGNGGIDTEADYPFIGTDGTCDASK 657
A + GC GG M+NAF ++ NGG+ TEA YP+ GTC+ ++
Sbjct: 1418 ADNDGCQGGLMDNAFEYIKNNGGLITEAAYPYRAARGTCNVAR 1546
Score = 33.1 bits (66), Expect(5) = 7e-040
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = +1 / -3
Query: 655 SLLASQVPSVPMKG*SASVSIPPLPMTNRNAFSICPPSQP 774
+L QVP G*+ASV PPL + A S+ PP P
Sbjct: 1548 ALATLQVPLAARYG*AASVISPPLFLMYSKALSMSPPWHP 1429
Score = 28.1 bits (55), Expect(5) = 7e-040
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +1 / -3
Query: 379 M*PASPQLALHEFFTIQ 429
M*P SP HEFFT+Q
Sbjct: 1833 M*PCSPHDGPHEFFTVQ 1783
Score = 28.1 bits (55), Expect(5) = 7e-040
Identities = 11/31 (35%), Positives = 12/31 (38%)
Frame = +2 / -1
Query: 257 PWQLP*PWXXXXXXXXPSQGRTRPWRCRTCP 349
PW W + RT PWRCR P
Sbjct: 1955 PWLQGRAWAWAWACCRS*RDRTPPWRCRRAP 1863
>gb|BU979600.1|BU979600 HA16K22r HA Hordeum vulgare subsp. vulgare cDNA clone HA16K22
5-PRIME, mRNA sequence
Length = 580
Score = 154 bits (331), Expect(3) = 9e-077
Identities = 60/89 (67%), Positives = 72/89 (80%)
Frame = -2 / +2
Query: 653 KNEKVATIDGLVEVASNNETALQEAVAIQPVSVAIDAGGRAFQHYSSGIFNGPCGTSLDH 474
KN KV +IDG +V N+E +LQ+AVA PVSVAI+AGGR FQ Y SG+F+G CGT LDH
Sbjct: 314 KNAKVVSIDGFEDVPENDEKSLQKAVAHHPVSVAIEAGGREFQLYHSGVFSGRCGTQLDH 493
Query: 473 GVTAVGYGSESGKDYWIVKNSWSASWGEA 387
GV AVGYG+E+GKDYWIV+NSW +WGEA
Sbjct: 494 GVVAVGYGTENGKDYWIVRNSWGPNWGEA 580
Score = 106 bits (227), Expect(3) = 8e-033
Identities = 44/65 (67%), Positives = 48/65 (73%)
Frame = +1 / -2
Query: 460 TAVTPWSRLVPHGPLKMPEL*CWNARPPASMATLTGWIATASCSAVSLLLATSTNPSMVA 639
TA TPWS VPH PLK PE * WN+RPPASMATLTGW ATA CS S TS+ PSM+
Sbjct: 507 TATTPWSSCVPHLPLKTPEW*SWNSRPPASMATLTGW*ATAFCSDFSSFSGTSSKPSMLT 328
Query: 640 TFSFF 654
TF+FF
Sbjct: 327 TFAFF 313
Score = 99.1 bits (210), Expect(3) = 9e-077
Identities = 34/56 (60%), Positives = 46/56 (82%)
Frame = -2 / +2
Query: 953 PDAIDWRQLGAVTEVKDQQQCGGCWAFSAVAAIEGVNAIATGNLVSLSEQEIIDCD 786
P+A+DWR+ GAV VK+Q QCG CWAFSAV+ +E +N I TG +V+LSEQE+++CD
Sbjct: 11 PEAVDWREKGAVAPVKNQGQCGSCWAFSAVSTVESINQIVTGEMVTLSEQELVECD 178
Score = 73.9 bits (155), Expect(3) = 9e-077
Identities = 27/53 (50%), Positives = 37/53 (69%)
Frame = -2 / +2
Query: 794 DCDAQDSGCDGGQMENAFRFVIGNGGIDTEADYPFIGTDGTCDASKEKNEKVA 636
D + Q SGC+GG M++AF F+I NGGIDTE DYP+ DG CD ++ + V+
Sbjct: 176 DINGQSSGCNGGLMDDAFEFIIKNGGIDTEDDYPYKAVDGRCDVLRKNAKVVS 334
Score = 55.6 bits (115), Expect(3) = 8e-033
Identities = 29/56 (51%), Positives = 30/56 (53%)
Frame = +1 / -2
Query: 787 SQSMISCSDSDTRLPVAIAFTPSMAATAENAQHPPHCCWSLTSVTAPSWRQSMASG 954
S S SCSD+ T PV I S TAE AQ PH W LT TAP QS ASG
Sbjct: 177 SHSTSSCSDNVTISPVTIWLMLSTVLTAEKAQQLPHWPWFLTGATAPFSLQSTASG 10
Score = 21.7 bits (41), Expect(3) = 8e-033
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +1 / -2
Query: 388 ASPQLALHEFFTIQ 429
ASPQ HE TIQ
Sbjct: 579 ASPQFGPHELRTIQ 538
>gb|CA018842.1|CA018842 HV09N03r HV Hordeum vulgare subsp. vulgare cDNA clone HV09N03
5-PRIME, mRNA sequence
Length = 608
Score = 142 bits (305), Expect(3) = 5e-074
Identities = 56/82 (68%), Positives = 67/82 (81%)
Frame = -2 / +1
Query: 653 KNEKVATIDGLVEVASNNETALQEAVAIQPVSVAIDAGGRAFQHYSSGIFNGPCGTSLDH 474
KN KV +IDG +V N+E +LQ+AVA PVSVAI+AGGR FQ Y SG+F+G CGT LDH
Sbjct: 358 KNAKVVSIDGFEDVPENDEKSLQKAVAHHPVSVAIEAGGREFQLYHSGVFSGRCGTQLDH 537
Query: 473 GVTAVGYGSESGKDYWIVKNSW 408
GV AVGYG+E+GKDYWIV+NSW
Sbjct: 538 GVVAVGYGTENGKDYWIVRNSW 603
Score = 106 bits (227), Expect(2) = 3e-032
Identities = 44/65 (67%), Positives = 48/65 (73%)
Frame = +1 / -1
Query: 460 TAVTPWSRLVPHGPLKMPEL*CWNARPPASMATLTGWIATASCSAVSLLLATSTNPSMVA 639
TA TPWS VPH PLK PE * WN+RPPASMATLTGW ATA CS S TS+ PSM+
Sbjct: 551 TATTPWSSCVPHLPLKTPEW*SWNSRPPASMATLTGW*ATAFCSDFSSFSGTSSKPSMLT 372
Query: 640 TFSFF 654
TF+FF
Sbjct: 371 TFAFF 357
Score = 101 bits (216), Expect(3) = 5e-074
Identities = 35/58 (60%), Positives = 48/58 (82%)
Frame = -2 / +1
Query: 959 DLPDAIDWRQLGAVTEVKDQQQCGGCWAFSAVAAIEGVNAIATGNLVSLSEQEIIDCD 786
+LP+A+DWR+ GAV VK+Q QCG CWAFSAV+ +E +N I TG +V+LSEQE+++CD
Sbjct: 49 ELPEAVDWREKGAVAPVKNQGQCGSCWAFSAVSTVESINQIVTGEMVTLSEQELVECD 222
Score = 73.9 bits (155), Expect(3) = 5e-074
Identities = 27/53 (50%), Positives = 37/53 (69%)
Frame = -2 / +1
Query: 794 DCDAQDSGCDGGQMENAFRFVIGNGGIDTEADYPFIGTDGTCDASKEKNEKVA 636
D + Q SGC+GG M++AF F+I NGGIDTE DYP+ DG CD ++ + V+
Sbjct: 220 DINGQSSGCNGGLMDDAFEFIIKNGGIDTEDDYPYKAVDGRCDVLRKNAKVVS 378
Score = 55.6 bits (115), Expect(2) = 3e-032
Identities = 29/56 (51%), Positives = 30/56 (53%)
Frame = +1 / -1
Query: 787 SQSMISCSDSDTRLPVAIAFTPSMAATAENAQHPPHCCWSLTSVTAPSWRQSMASG 954
S S SCSD+ T PV I S TAE AQ PH W LT TAP QS ASG
Sbjct: 221 SHSTSSCSDNVTISPVTIWLMLSTVLTAEKAQQLPHWPWFLTGATAPFSLQSTASG 54
>gb|CA018921.1|CA018921 HV10A20r HV Hordeum vulgare subsp. vulgare cDNA clone HV10A20
5-PRIME, mRNA sequence
Length = 577
Score = 140 bits (301), Expect(3) = 4e-072
Identities = 58/90 (64%), Positives = 63/90 (70%)
Frame = -2 / +1
Query: 641 VATIDGLVEVASNNETALQEAVAIQPVSVAIDAGGRAFQHYSSGIFNGPCGTSLDHGVTA 462
V TIDG EV S+ E L +AVA QP+SV I RAFQ YS GIF+GPC TSLDH V
Sbjct: 307 VVTIDGYKEVPSSKEDLLLQAVAQQPISVGICGSARAFQLYSQGIFDGPCPTSLDHAVLI 486
Query: 461 VGYGSESGKDYWIVKNSWSASWGEAGYIRM 372
VGYGSE GKDYWIVKNSW WG GY+ M
Sbjct: 487 VGYGSEGGKDYWIVKNSWGERWGMKGYMHM 576
Score = 103 bits (219), Expect(3) = 4e-072
Identities = 40/63 (63%), Positives = 49/63 (77%)
Frame = -2 / +1
Query: 947 AIDWRQLGAVTEVKDQQQCGGCWAFSAVAAIEGVNAIATGNLVSLSEQEIIDCDAQDSGC 768
A+DWRQ GAVT+VKDQ CG CW+FSA A+EG+N I TG+L+SLSEQE+IDCD +
Sbjct: 1 ALDWRQSGAVTKVKDQGSCGACWSFSATGAMEGINKITTGSLLSLSEQELIDCDRSYNTG 180
Query: 767 DGG 759
GG
Sbjct: 181 CGG 189
Score = 68.0 bits (142), Expect(3) = 4e-072
Identities = 27/47 (57%), Positives = 33/47 (70%)
Frame = -2 / +1
Query: 779 DSGCDGGQMENAFRFVIGNGGIDTEADYPFIGTDGTCDASKEKNEKV 639
++GC GG M A++FVI NGGIDTE DYPF DGTC+ +K K V
Sbjct: 172 NTGCGGGLMTYAYKFVIKNGGIDTEDDYPFREADGTCNKNKLKKHVV 312
>gb|BG415364.1|BG415364 HVSMEk0006D05f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0006D05f, mRNA sequence
Length = 660
Score = 104 bits (222), Expect(4) = 1e-071
Identities = 43/70 (61%), Positives = 53/70 (75%)
Frame = -2 / +2
Query: 656 EKNEKVATIDGLVEVASNNETALQEAVAIQPVSVAIDAGGRAFQHYSSGIFNGPCGTSLD 477
+K V TIDG +V +N+ETAL++AVA QPV+VAI+A G FQ YS G+F G CGT LD
Sbjct: 284 KKPSAVVTIDGYEDVPANDETALKKAVAAQPVAVAIEASGSHFQFYSEGVFAGKCGTELD 463
Query: 476 HGVTAVGYGS 447
HGV AVGYG+
Sbjct: 464 HGVAAVGYGT 493
Score = 101 bits (216), Expect(4) = 1e-071
Identities = 37/56 (66%), Positives = 46/56 (82%)
Frame = -2 / +2
Query: 941 DWRQLGAVTEVKDQQQCGGCWAFSAVAAIEGVNAIATGNLVSLSEQEIIDCDAQDS 774
DWRQ GAVT VKDQ QCG CWAFS +AA+EG+NAI + NL SLSEQ+++DCD + +
Sbjct: 2 DWRQEGAVTAVKDQGQCGSCWAFSTIAAVEGINAIRSKNLTSLSEQQLVDCDTKSN 169
Score = 83.1 bits (175), Expect(4) = 1e-071
Identities = 31/45 (68%), Positives = 34/45 (75%)
Frame = -2 / +2
Query: 440 GKDYWIVKNSWSASWGEAGYIRMRRNVPRPTGKCGIAMDASYPVK 306
G YWIVKNSW WGE GYIRM+R+V G CGIAM+ASYPVK
Sbjct: 503 GTKYWIVKNSWGPEWGEKGYIRMKRDVKDKEGLCGIAMEASYPVK 637
Score = 75.8 bits (159), Expect(3) = 2e-039
Identities = 38/67 (56%), Positives = 39/67 (58%)
Frame = +1 / -1
Query: 460 TAVTPWSRLVPHGPLKMPEL*CWNARPPASMATLTGWIATASCSAVSLLLATSTNPSMVA 639
TA TPWS VPH P P * W P ASMAT TG ATA SAVS L TS+ PSMV
Sbjct: 480 TAATPWSSSVPHLPANTPSE*NWKCDPLASMATATGCAATAFFSAVSSLAGTSSYPSMVT 301
Query: 640 TFSFFSL 660
T F L
Sbjct: 300 TADGFLL 280
Score = 74.4 bits (156), Expect(3) = 2e-039
Identities = 34/61 (55%), Positives = 36/61 (59%)
Frame = +1 / -1
Query: 760 PPSQPLSWASQSMISCSDSDTRLPVAIAFTPSMAATAENAQHPPHCCWSLTSVTAPSWRQ 939
P L + SQS CSD D R IA PS AA E AQ PHC WSLT+VTAPS RQ
Sbjct: 183 PLQPALDFVSQSTSCCSDRDVRFLERIALMPSTAAIVEKAQQLPHCPWSLTAVTAPSCRQ 4
Query: 940 S 942
S
Sbjct: 3 S 1
Score = 51.9 bits (107), Expect(3) = 2e-039
Identities = 25/40 (62%), Positives = 26/40 (65%)
Frame = +1 / -1
Query: 310 TG*DASMAMPHLPVGRGTLRLMRM*PASPQLALHEFFTIQ 429
TG*DASMA+P P T R MRM P SP HEFFTIQ
Sbjct: 633 TG*DASMAIPQSPSLSFTSRFMRMYPFSPHSGPHEFFTIQ 514
Score = 39.1 bits (79), Expect(4) = 1e-071
Identities = 12/30 (40%), Positives = 22/30 (73%)
Frame = -2 / +2
Query: 779 DSGCDGGQMENAFRFVIGNGGIDTEADYPF 690
++GC+GG M+ AF+++ +GG+ E YP+
Sbjct: 167 NAGCNGGLMDYAFQYIAKHGGVAAEDAYPY 256
>emb|A98645.1| Sequence 1 from Patent WO9910500
Length = 1286
Score = 223 bits (481), Expect(2) = 7e-071
Identities = 93/173 (53%), Positives = 112/173 (64%)
Frame = -2 / +1
Query: 953 PDAIDWRQLGAVTEVKDQQQCGGCWAFSAVAAIEGVNAIATGNLVSLSEQEIIDCDAQDS 774
P +DWR GAVT VK Q CG CWAF+AVAAIEG+N I TG LVSLSEQ ++DCD +
Sbjct: 445 PCCVDWRSSGAVTGVKHQGTCGSCWAFAAVAAIEGMNKIRTGELVSLSEQVLVDCDTVST 624
Query: 773 GCDGGQMENAFRFVIGNGGIDTEADYPFIGTDGTCDASKEKNEKVATIDGLVEVASNNET 594
GC GG ++A FV GGI +E YP+ G G CD K + A+I G V SNNE
Sbjct: 625 GCGGGHSDSAMAFVAARGGITSEERYPYAGFQGKCDVDKLMFDHQASIKGFKAVPSNNEA 804
Query: 593 ALQEAVAIQPVSVAIDAGGRAFQHYSSGIFNGPCGTSLDHGVTAVGYGSESGK 435
L AVA+QPV+V IDA G AFQ YS GI+ GPC +++H VT VGY G+
Sbjct: 805 QLAIAVAMQPVTVYIDASGSAFQFYSGGIYRGPCSANVNHAVTIVGYCEGPGE 963
Score = 156 bits (335), Expect(3) = 1e-041
Identities = 83/165 (50%), Positives = 92/165 (55%)
Frame = +1 / -1
Query: 460 TAVTPWSRLVPHGPLKMPEL*CWNARPPASMATLTGWIATASCSAVSLLLATSTNPSMVA 639
T VT W L GP MP * WNA P ASM T+TG +ATA S SLL T+ P M A
Sbjct: 938 TMVTAWFTLAEQGPR*MPPE*NWNAEPLASMYTVTGCMATAIAS*ASLLDGTALKPLMDA 759
Query: 640 TFSFFSLLASQVPSVPMKG*SASVSIPPLPMTNRNAFSICPPSQPLSWASQSMISCSDSD 819
+S SL S P P G +S +PP T A S PP QP+ SQS +CSDSD
Sbjct: 758 WWSNMSLSTSHFPWNPAYGYLSSDVMPPRAATKAMAESEWPPPQPVLTVSQSTSTCSDSD 579
Query: 820 TRLPVAIAFTPSMAATAENAQHPPHCCWSLTSVTAPSWRQSMASG 954
T PV I F PS+AATA NAQH P W LT VTAP RQS G
Sbjct: 578 TSSPVLILFMPSIAATAANAQHDPQVPWCLTPVTAPLERQSTQHG 444
Score = 65.7 bits (137), Expect(2) = 7e-071
Identities = 23/47 (48%), Positives = 28/47 (59%)
Frame = -2 / +1
Query: 452 GSESGKDYWIVKNSWSASWGEAGYIRMRRNVPRPTGKCGIAMDASYP 312
G G YWI KNSWS WGE GY+ + ++V TG CG+A YP
Sbjct: 952 GPGEGNKYWIAKNSWSNDWGEQGYVYLAKDVAWSTGTCGLATSPFYP 1092
Score = 29.0 bits (57), Expect(3) = 1e-041
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +3 / -3
Query: 333 DAALARGPGHVAPHADVAGLAPAGAPR 413
+A ARGP H+ D++ P APR
Sbjct: 1071 EATCARGPCHILCEVDISLFTPVVAPR 991
Score = 24.0 bits (46), Expect(3) = 1e-041
Identities = 7/13 (53%), Positives = 7/13 (53%)
Frame = +2 / -2
Query: 314 GRTRPWRCRTCPW 352
GR WR CPW
Sbjct: 1090 GRRARWRGHMCPW 1052
>gb|BJ472680.1|BJ472680 BJ472680 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal36b13 5', mRNA sequence
Length = 584
Score = 147 bits (315), Expect(3) = 1e-069
Identities = 61/99 (61%), Positives = 67/99 (67%)
Frame = -2 / +3
Query: 641 VATIDGLVEVASNNETALQEAVAIQPVSVAIDAGGRAFQHYSSGIFNGPCGTSLDHGVTA 462
V TIDG EV S+ E L +AVA QP+SV I RAFQ YS GIF+GPC TSLDH V
Sbjct: 288 VVTIDGYKEVPSSKEDLLLQAVAQQPISVGICGSARAFQLYSQGIFDGPCPTSLDHAVLI 467
Query: 461 VGYGSESGKDYWIVKNSWSASWGEAGYIRMRRNVPRPTG 345
VGYGSE GKDYWIVKNSW WG GY+ M RN +G
Sbjct: 468 VGYGSEGGKDYWIVKNSWGERWGMKGYMHMHRNTGSSSG 584
Score = 88.6 bits (187), Expect(3) = 1e-069
Identities = 35/56 (62%), Positives = 43/56 (76%)
Frame = -2 / +3
Query: 926 GAVTEVKDQQQCGGCWAFSAVAAIEGVNAIATGNLVSLSEQEIIDCDAQDSGCDGG 759
GAVT+VKDQ CG CW+FSA A+EG+N I TG+L+SLSEQE+IDCD + GG
Sbjct: 3 GAVTKVKDQGXCGACWSFSATGAMEGINKITTGSLLSLSEQELIDCDRSYNTGCGG 170
Score = 68.0 bits (142), Expect(3) = 1e-069
Identities = 27/47 (57%), Positives = 33/47 (70%)
Frame = -2 / +3
Query: 779 DSGCDGGQMENAFRFVIGNGGIDTEADYPFIGTDGTCDASKEKNEKV 639
++GC GG M A++FVI NGGIDTE DYPF DGTC+ +K K V
Sbjct: 153 NTGCGGGLMTYAYKFVIKNGGIDTEDDYPFREADGTCNKNKLKKHVV 293
>gb|CA007710.1|CA007710 HU08N05r HU Hordeum vulgare subsp. vulgare cDNA clone HU08N05
5-PRIME, mRNA sequence
Length = 552
Score = 188 bits (404), Expect(3) = 2e-069
Identities = 73/109 (66%), Positives = 88/109 (80%)
Frame = -2 / +2
Query: 653 KNEKVATIDGLVEVASNNETALQEAVAIQPVSVAIDAGGRAFQHYSSGIFNGPCGTSLDH 474
KN KV +IDG +V N+E +LQ+AVA PVSVAI+AGGR FQ Y SG+F+G CGT LDH
Sbjct: 218 KNAKVVSIDGFEDVPENDEKSLQKAVAHHPVSVAIEAGGREFQLYHSGVFSGRCGTQLDH 397
Query: 473 GVTAVGYGSESGKDYWIVKNSWSASWGEAGYIRMRRNVPRPTGKCGIAM 327
GV AVGYG+E+GKDYWIV+NSW +WGEAGY+RM RN+ +GKCGIAM
Sbjct: 398 GVVAVGYGTENGKDYWIVRNSWGPNWGEAGYLRMERNINVTSGKCGIAM 544
Score = 106 bits (227), Expect(3) = 1e-038
Identities = 44/65 (67%), Positives = 48/65 (73%)
Frame = +1 / -1
Query: 460 TAVTPWSRLVPHGPLKMPEL*CWNARPPASMATLTGWIATASCSAVSLLLATSTNPSMVA 639
TA TPWS VPH PLK PE * WN+RPPASMATLTGW ATA CS S TS+ PSM+
Sbjct: 411 TATTPWSSCVPHLPLKTPEW*SWNSRPPASMATLTGW*ATAFCSDFSSFSGTSSKPSMLT 232
Query: 640 TFSFF 654
TF+FF
Sbjct: 231 TFAFF 217
Score = 73.9 bits (155), Expect(3) = 2e-069
Identities = 27/53 (50%), Positives = 37/53 (69%)
Frame = -2 / +2
Query: 794 DCDAQDSGCDGGQMENAFRFVIGNGGIDTEADYPFIGTDGTCDASKEKNEKVA 636
D + Q SGC+GG M++AF F+I NGGIDTE DYP+ DG CD ++ + V+
Sbjct: 80 DINGQSSGCNGGLMDDAFEFIIKNGGIDTEDDYPYKAVDGRCDVLRKNAKVVS 238
Score = 49.6 bits (102), Expect(3) = 1e-038
Identities = 27/56 (48%), Positives = 32/56 (57%)
Frame = +1 / -1
Query: 652 FSLLASQVPSVPMKG*SASVSIPPLPMTNRNAFSICPPSQPLSWASQSMISCSDSD 819
F L S +PS + G*S+SVS+PP M N A SI PP QPL S + S SD
Sbjct: 222 FFLRTSHLPSTAL*G*SSSVSMPPFFMMNSKASSIRPPLQPLLCPLMSHSTSSCSD 55
Score = 42.3 bits (86), Expect(3) = 1e-038
Identities = 20/37 (54%), Positives = 22/37 (59%)
Frame = +1 / -1
Query: 319 DASMAMPHLPVGRGTLRLMRM*PASPQLALHEFFTIQ 429
D MA+PH P+ LR MR PASPQ HE TIQ
Sbjct: 552 DDIMAIPHFPLVTLMLRSMRRYPASPQFGPHELRTIQ 442
Score = 40.9 bits (83), Expect(3) = 2e-069
Identities = 13/24 (54%), Positives = 20/24 (83%)
Frame = -2 / +2
Query: 857 IEGVNAIATGNLVSLSEQEIIDCD 786
+E +N I TG +V+LSEQE+++CD
Sbjct: 11 VESINQIVTGEMVTLSEQELVECD 82
>gb|CA018792.1|CA018792 HV09K16r HV Hordeum vulgare subsp. vulgare cDNA clone HV09K16
5-PRIME, mRNA sequence
Length = 631
Score = 92.7 bits (196), Expect(4) = 4e-068
Identities = 38/64 (59%), Positives = 45/64 (70%)
Frame = -2 / +3
Query: 641 VATIDGLVEVASNNETALQEAVAIQPVSVAIDAGGRAFQHYSSGIFNGPCGTSLDHGVTA 462
V IDG +V +N+E L AVA QPVSVA++A G+AF YS G+F G CGT LDHGV
Sbjct: 297 VVHIDGHQDVPANSEEDLARAVANQPVSVAVEASGKAFMFYSEGVFTGECGTELDHGVAV 476
Query: 461 VGYG 450
VGYG
Sbjct: 477 VGYG 488
Score = 88.1 bits (186), Expect(4) = 4e-068
Identities = 33/48 (68%), Positives = 40/48 (83%)
Frame = -2 / +3
Query: 917 TEVKDQQQCGGCWAFSAVAAIEGVNAIATGNLVSLSEQEIIDCDAQDS 774
T VKDQ +CG CWAFS V ++EG+NAI TG+LVSLSEQE+IDCD D+
Sbjct: 12 TGVKDQGKCGSCWAFSTVVSVEGINAIRTGSLVSLSEQELIDCDTADN 155
Score = 77.6 bits (163), Expect(4) = 4e-068
Identities = 29/46 (63%), Positives = 33/46 (71%)
Frame = -2 / +3
Query: 449 SESGKDYWIVKNSWSASWGEAGYIRMRRNVPRPTGKCGIAMDASYP 312
SE GK YW VKNSW SWGE GYIR+ ++ G CGIAM+ASYP
Sbjct: 492 SEDGKAYWTVKNSWGPSWGEQGYIRVEKDSGASGGLCGIAMEASYP 629
Score = 68.0 bits (142), Expect(5) = 1e-035
Identities = 33/65 (50%), Positives = 36/65 (55%)
Frame = +1 / -1
Query: 460 TAVTPWSRLVPHGPLKMPEL*CWNARPPASMATLTGWIATASCSAVSLLLATSTNPSMVA 639
T TPWS VPH P+ P * NA P AS AT TGW ATA + SLL TS PS+
Sbjct: 478 TTATPWSSSVPHSPVNTPSE*NMNAFPLASTATDTGWFATALARSSSLLAGTSWCPSICT 299
Query: 640 TFSFF 654
T F
Sbjct: 298 TTGEF 284
Score = 67.5 bits (141), Expect(5) = 1e-035
Identities = 30/48 (62%), Positives = 32/48 (66%)
Frame = +1 / -1
Query: 775 LSWASQSMISCSDSDTRLPVAIAFTPSMAATAENAQHPPHCCWSLTSV 918
LS SQSM SCS+ DTRLPV +A PS T ENAQ PH WSLT V
Sbjct: 154 LSAVSQSMSSCSERDTRLPVRMALMPSTDTTVENAQQLPHLPWSLTPV 11
Score = 58.3 bits (121), Expect(4) = 4e-068
Identities = 20/43 (46%), Positives = 29/43 (67%)
Frame = -2 / +3
Query: 785 AQDSGCDGGQMENAFRFVIGNGGIDTEADYPFIGTDGTCDASK 657
A + GC GG M+NAF ++ NGG+ TEA YP+ GTC+ ++
Sbjct: 147 ADNDGCQGGLMDNAFEYIKNNGGLITEAAYPYRAARGTCNVAR 275
Score = 33.1 bits (66), Expect(5) = 1e-035
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = +1 / -1
Query: 655 SLLASQVPSVPMKG*SASVSIPPLPMTNRNAFSICPPSQP 774
+L QVP G*+ASV PPL + A S+ PP P
Sbjct: 277 ALATLQVPLAARYG*AASVISPPLFLMYSKALSMSPPWHP 158
Score = 28.1 bits (55), Expect(5) = 1e-035
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +1 / -1
Query: 379 M*PASPQLALHEFFTIQ 429
M*P SP HEFFT+Q
Sbjct: 562 M*PCSPHDGPHEFFTVQ 512
Score = 26.7 bits (52), Expect(5) = 1e-035
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = +1 / -1
Query: 310 TG*DASMAMPHLP 348
TG*DASMAMP P
Sbjct: 631 TG*DASMAMPQSP 593
>gb|BI778206.2|BI778206 EBro07_SQ002_I12_R root, 3 week, reduced light, cv Optic, EBro07
Hordeum vulgare subsp. vulgare cDNA clone
EBro07_SQ002_I12 5', mRNA sequence
Length = 528
Score = 199 bits (430), Expect(3) = 5e-068
Identities = 77/117 (65%), Positives = 95/117 (81%)
Frame = -2 / +1
Query: 662 SKEKNEKVATIDGLVEVASNNETALQEAVAIQPVSVAIDAGGRAFQHYSSGIFNGPCGTS 483
+ +KN KV TIDG +V N+E +LQ+AVA QP+SVAI+AGGRAFQ Y SGIF G CGT+
Sbjct: 175 ANKKNAKVVTIDGYEDVPVNSEKSLQKAVANQPISVAIEAGGRAFQLYKSGIFTGTCGTA 354
Query: 482 LDHGVTAVGYGSESGKDYWIVKNSWSASWGEAGYIRMRRNVPRPTGKCGIAMDASYP 312
LDHGV AVGYG+E+GKDYW+V+NSW + WGE GYIRM RN+ +GKCGIA++ SYP
Sbjct: 355 LDHGVAAVGYGTENGKDYWLVRNSWGSVWGENGYIRMERNIKASSGKCGIAVEPSYP 525
Score = 102 bits (218), Expect(3) = 2e-037
Identities = 42/72 (58%), Positives = 50/72 (69%)
Frame = +1 / -2
Query: 460 TAVTPWSRLVPHGPLKMPEL*CWNARPPASMATLTGWIATASCSAVSLLLATSTNPSMVA 639
TA TPWS VP P+K+P+L* WNA PPASMATL GW ATA C SL TS+ PSMV
Sbjct: 377 TAATPWSSAVPQVPVKIPDL*SWNALPPASMATLMGWFATAFCRLFSLFTGTSSYPSMVT 198
Query: 640 TFSFFSLLASQV 675
T +FF L + ++
Sbjct: 197 TLAFFLLASQRL 162
Score = 65.7 bits (137), Expect(3) = 5e-068
Identities = 24/47 (51%), Positives = 33/47 (70%)
Frame = -2 / +1
Query: 779 DSGCDGGQMENAFRFVIGNGGIDTEADYPFIGTDGTCDASKEKNEKV 639
+ GC+GG M+ AF F+I NGGID+E DYP+ D CDA+K+ + V
Sbjct: 61 NQGCNGGLMDYAFEFIINNGGIDSEEDYPYKERDNRCDANKKNAKVV 201
Score = 47.3 bits (97), Expect(3) = 2e-037
Identities = 25/41 (60%), Positives = 28/41 (68%)
Frame = +1 / -2
Query: 652 FSLLASQVPSVPMKG*SASVSIPPLPMTNRNAFSICPPSQP 774
F LLASQ S+ + G*S+S SIPPL M N NA SI PP P
Sbjct: 188 FFLLASQRLSLSL*G*SSSESIPPLLMMNSNA*SIRPPLHP 66
Score = 44.6 bits (91), Expect(3) = 2e-037
Identities = 21/39 (53%), Positives = 25/39 (64%)
Frame = +1 / -2
Query: 313 G*DASMAMPHLPVGRGTLRLMRM*PASPQLALHEFFTIQ 429
G*+ S A+PHLP+ LR +RM*P SPQ EF T Q
Sbjct: 524 G*EGSTAIPHLPLDALMLRSIRM*PFSPQTLPQEFLTSQ 408
Score = 32.7 bits (65), Expect(3) = 5e-068
Identities = 10/16 (62%), Positives = 15/16 (93%)
Frame = -2 / +1
Query: 833 TGNLVSLSEQEIIDCD 786
TG+++ LSEQE++DCD
Sbjct: 4 TGDMIPLSEQELVDCD 51
>gb|BG414929.1|BG414929 HVSMEk0004E19f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0004E19f, mRNA sequence
Length = 648
Score = 144 bits (309), Expect(3) = 9e-068
Identities = 60/106 (56%), Positives = 72/106 (67%)
Frame = -2 / +2
Query: 653 KNEKVATIDGLVEVASNNETALQEAVAIQPVSVAIDAGGRAFQHYSSGIFNGPCGTSLDH 474
KN KV +IDG +V N+E +LQ+AVA PVSVAI+AGGR FQ Y SG+F+G CGT LDH
Sbjct: 275 KNAKVVSIDGFEDVPENDEKSLQKAVAHHPVSVAIEAGGREFQLYHSGVFSGRCGTQLDH 454
Query: 473 GVTAVGYGSESGKDYWIVKNSWSASWGEAGYIRMRRNVPRPTGKCG 336
GV AVGYG+E+GKDYWIV+NSW + G P G G
Sbjct: 455 GVVAVGYGTENGKDYWIVRNSWGPTEERLGTSAWSATST*PVGSAG 592
Score = 106 bits (227), Expect(3) = 7e-035
Identities = 44/65 (67%), Positives = 48/65 (73%)
Frame = +1 / -1
Query: 460 TAVTPWSRLVPHGPLKMPEL*CWNARPPASMATLTGWIATASCSAVSLLLATSTNPSMVA 639
TA TPWS VPH PLK PE * WN+RPPASMATLTGW ATA CS S TS+ PSM+
Sbjct: 468 TATTPWSSCVPHLPLKTPEW*SWNSRPPASMATLTGW*ATAFCSDFSSFSGTSSKPSMLT 289
Query: 640 TFSFF 654
TF+FF
Sbjct: 288 TFAFF 274
Score = 79.0 bits (166), Expect(3) = 9e-068
Identities = 28/46 (60%), Positives = 37/46 (80%)
Frame = -2 / +2
Query: 923 AVTEVKDQQQCGGCWAFSAVAAIEGVNAIATGNLVSLSEQEIIDCD 786
AV VK+Q QCG CWAFSAV+ +E +N I TG +V+LSEQE+++CD
Sbjct: 2 AVAPVKNQGQCGSCWAFSAVSTVESINQIVTGEMVTLSEQELVECD 139
Score = 73.9 bits (155), Expect(3) = 9e-068
Identities = 27/53 (50%), Positives = 37/53 (69%)
Frame = -2 / +2
Query: 794 DCDAQDSGCDGGQMENAFRFVIGNGGIDTEADYPFIGTDGTCDASKEKNEKVA 636
D + Q SGC+GG M++AF F+I NGGIDTE DYP+ DG CD ++ + V+
Sbjct: 137 DINGQSSGCNGGLMDDAFEFIIKNGGIDTEDDYPYKAVDGRCDVLRKNAKVVS 295
Score = 49.6 bits (102), Expect(3) = 7e-035
Identities = 27/56 (48%), Positives = 32/56 (57%)
Frame = +1 / -1
Query: 652 FSLLASQVPSVPMKG*SASVSIPPLPMTNRNAFSICPPSQPLSWASQSMISCSDSD 819
F L S +PS + G*S+SVS+PP M N A SI PP QPL S + S SD
Sbjct: 279 FFLRTSHLPSTAL*G*SSSVSMPPFFMMNSKASSIRPPLQPLLCPLMSHSTSSCSD 112
Score = 29.9 bits (59), Expect(3) = 7e-035
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +1 / -2
Query: 328 MAMPHLPVGRGTLRLMRM*PASPQL 402
MA+ H P+ LR MR PASPQL
Sbjct: 599 MAIQHFPLVTLMLRSMRRYPASPQL 525
>gb|AV923091.1|AV923091 AV923091 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd3l16 5', mRNA sequence
Length = 510
Score = 152 bits (327), Expect(3) = 8e-067
Identities = 59/88 (67%), Positives = 71/88 (80%)
Frame = -2 / +2
Query: 653 KNEKVATIDGLVEVASNNETALQEAVAIQPVSVAIDAGGRAFQHYSSGIFNGPCGTSLDH 474
KN KV +IDG +V N+E +LQ+AVA PVSVAI+AGGR FQ Y SG+F+G CGT LDH
Sbjct: 245 KNAKVVSIDGFEDVPENDEKSLQKAVAHHPVSVAIEAGGREFQLYHSGVFSGRCGTQLDH 424
Query: 473 GVTAVGYGSESGKDYWIVKNSWSASWGE 390
GV AVGYG+E+GKDYWIV+NSW +WGE
Sbjct: 425 GVVAVGYGTENGKDYWIVRNSWGPNWGE 508
Score = 106 bits (227), Expect(2) = 2e-031
Identities = 44/65 (67%), Positives = 48/65 (73%)
Frame = +1 / -1
Query: 460 TAVTPWSRLVPHGPLKMPEL*CWNARPPASMATLTGWIATASCSAVSLLLATSTNPSMVA 639
TA TPWS VPH PLK PE * WN+RPPASMATLTGW ATA CS S TS+ PSM+
Sbjct: 438 TATTPWSSCVPHLPLKTPEW*SWNSRPPASMATLTGW*ATAFCSDFSSFSGTSSKPSMLT 259
Query: 640 TFSFF 654
TF+FF
Sbjct: 258 TFAFF 244
Score = 73.9 bits (155), Expect(3) = 8e-067
Identities = 27/53 (50%), Positives = 37/53 (69%)
Frame = -2 / +2
Query: 794 DCDAQDSGCDGGQMENAFRFVIGNGGIDTEADYPFIGTDGTCDASKEKNEKVA 636
D + Q SGC+GG M++AF F+I NGGIDTE DYP+ DG CD ++ + V+
Sbjct: 107 DINGQSSGCNGGLMDDAFEFIIKNGGIDTEDDYPYKAVDGRCDVLRKNAKVVS 265
Score = 67.5 bits (141), Expect(3) = 8e-067
Identities = 22/36 (61%), Positives = 30/36 (83%)
Frame = -2 / +2
Query: 893 CGGCWAFSAVAAIEGVNAIATGNLVSLSEQEIIDCD 786
CG CWAFSAV+ +E +N I TG +V+LSEQE+++CD
Sbjct: 2 CGSCWAFSAVSTVESINQIVTGEMVTLSEQELVECD 109
Score = 49.6 bits (102), Expect(2) = 2e-031
Identities = 27/56 (48%), Positives = 32/56 (57%)
Frame = +1 / -1
Query: 652 FSLLASQVPSVPMKG*SASVSIPPLPMTNRNAFSICPPSQPLSWASQSMISCSDSD 819
F L S +PS + G*S+SVS+PP M N A SI PP QPL S + S SD
Sbjct: 249 FFLRTSHLPSTAL*G*SSSVSMPPFFMMNSKASSIRPPLQPLLCPLMSHSTSSCSD 82
>gb|CA015084.1|CA015084 HT13D10r HT Hordeum vulgare subsp. vulgare cDNA clone HT13D10
5-PRIME, mRNA sequence
Length = 559
Score = 199 bits (428), Expect(2) = 4e-066
Identities = 79/125 (63%), Positives = 96/125 (76%)
Frame = -2 / +3
Query: 653 KNEKVATIDGLVEVASNNETALQEAVAIQPVSVAIDAGGRAFQHYSSGIFNGPCGTSLDH 474
KN KV +IDG +V N+E +LQ+AVA PVSVAI+AGGR FQ Y SG+F+G CGT LDH
Sbjct: 171 KNAKVVSIDGFEDVPENDEKSLQKAVAHHPVSVAIEAGGREFQLYHSGVFSGRCGTQLDH 350
Query: 473 GVTAVGYGSESGKDYWIVKNSWSASWGEAGYIRMRRNVPRPTGKCGIAMDASYPVKDTYH 294
GV AVGYG+E+GKDYWIV+NSW +WGEAGY+RM RN+ +GKCGIAM +SYP K +
Sbjct: 351 GVVAVGYGTENGKDYWIVRNSWGPNWGEAGYLRMERNINVTSGKCGIAMMSSYPTKKGAN 530
Query: 293 DPGTA 279
P A
Sbjct: 531 PPKPA 545
Score = 106 bits (227), Expect(3) = 3e-038
Identities = 44/65 (67%), Positives = 48/65 (73%)
Frame = +1 / -1
Query: 460 TAVTPWSRLVPHGPLKMPEL*CWNARPPASMATLTGWIATASCSAVSLLLATSTNPSMVA 639
TA TPWS VPH PLK PE * WN+RPPASMATLTGW ATA CS S TS+ PSM+
Sbjct: 364 TATTPWSSCVPHLPLKTPEW*SWNSRPPASMATLTGW*ATAFCSDFSSFSGTSSKPSMLT 185
Query: 640 TFSFF 654
TF+FF
Sbjct: 184 TFAFF 170
Score = 73.9 bits (155), Expect(2) = 4e-066
Identities = 27/53 (50%), Positives = 37/53 (69%)
Frame = -2 / +3
Query: 794 DCDAQDSGCDGGQMENAFRFVIGNGGIDTEADYPFIGTDGTCDASKEKNEKVA 636
D + Q SGC+GG M++AF F+I NGGIDTE DYP+ DG CD ++ + V+
Sbjct: 33 DINGQSSGCNGGLMDDAFEFIIKNGGIDTEDDYPYKAVDGRCDVLRKNAKVVS 191
Score = 47.8 bits (98), Expect(3) = 3e-038
Identities = 23/42 (54%), Positives = 27/42 (64%)
Frame = +1 / -1
Query: 652 FSLLASQVPSVPMKG*SASVSIPPLPMTNRNAFSICPPSQPL 777
F L S +PS + G*S+SVS+PP M N A SI PP QPL
Sbjct: 175 FFLRTSHLPSTAL*G*SSSVSMPPFFMMNSKASSIRPPLQPL 50
Score = 43.2 bits (88), Expect(3) = 3e-038
Identities = 21/39 (53%), Positives = 23/39 (58%)
Frame = +1 / -1
Query: 313 G*DASMAMPHLPVGRGTLRLMRM*PASPQLALHEFFTIQ 429
G D MA+PH P+ LR MR PASPQ HE TIQ
Sbjct: 511 GYDDIMAIPHFPLVTLMLRSMRRYPASPQFGPHELRTIQ 395
>gb|BU995743.1|BU995743 HM11D16r HM Hordeum vulgare subsp. vulgare cDNA clone HM11D16
5-PRIME, mRNA sequence
Length = 642
Score = 199 bits (428), Expect(2) = 2e-065
Identities = 79/125 (63%), Positives = 96/125 (76%)
Frame = -2 / +1
Query: 653 KNEKVATIDGLVEVASNNETALQEAVAIQPVSVAIDAGGRAFQHYSSGIFNGPCGTSLDH 474
KN KV +IDG +V N+E +LQ+AVA PVSVAI+AGGR FQ Y SG+F+G CGT LDH
Sbjct: 157 KNAKVVSIDGFEDVPENDEKSLQKAVAHHPVSVAIEAGGREFQLYHSGVFSGRCGTQLDH 336
Query: 473 GVTAVGYGSESGKDYWIVKNSWSASWGEAGYIRMRRNVPRPTGKCGIAMDASYPVKDTYH 294
GV AVGYG+E+GKDYWIV+NSW +WGEAGY+RM RN+ +GKCGIAM +SYP K +
Sbjct: 337 GVVAVGYGTENGKDYWIVRNSWGPNWGEAGYLRMERNINVTSGKCGIAMMSSYPTKKGAN 516
Query: 293 DPGTA 279
P A
Sbjct: 517 PPKPA 531
Score = 106 bits (227), Expect(3) = 3e-038
Identities = 44/65 (67%), Positives = 48/65 (73%)
Frame = +1 / -2
Query: 460 TAVTPWSRLVPHGPLKMPEL*CWNARPPASMATLTGWIATASCSAVSLLLATSTNPSMVA 639
TA TPWS VPH PLK PE * WN+RPPASMATLTGW ATA CS S TS+ PSM+
Sbjct: 350 TATTPWSSCVPHLPLKTPEW*SWNSRPPASMATLTGW*ATAFCSDFSSFSGTSSKPSMLT 171
Query: 640 TFSFF 654
TF+FF
Sbjct: 170 TFAFF 156
Score = 71.6 bits (150), Expect(2) = 2e-065
Identities = 26/51 (50%), Positives = 36/51 (70%)
Frame = -2 / +1
Query: 788 DAQDSGCDGGQMENAFRFVIGNGGIDTEADYPFIGTDGTCDASKEKNEKVA 636
+ Q SGC+GG M++AF F+I NGGIDTE DYP+ DG CD ++ + V+
Sbjct: 25 NGQSSGCNGGLMDDAFEFIIKNGGIDTEDDYPYKAVDGRCDVLRKNAKVVS 177
Score = 47.8 bits (98), Expect(3) = 3e-038
Identities = 23/42 (54%), Positives = 27/42 (64%)
Frame = +1 / -2
Query: 652 FSLLASQVPSVPMKG*SASVSIPPLPMTNRNAFSICPPSQPL 777
F L S +PS + G*S+SVS+PP M N A SI PP QPL
Sbjct: 161 FFLRTSHLPSTAL*G*SSSVSMPPFFMMNSKASSIRPPLQPL 36
Score = 43.2 bits (88), Expect(3) = 3e-038
Identities = 21/39 (53%), Positives = 23/39 (58%)
Frame = +1 / -2
Query: 313 G*DASMAMPHLPVGRGTLRLMRM*PASPQLALHEFFTIQ 429
G D MA+PH P+ LR MR PASPQ HE TIQ
Sbjct: 497 GYDDIMAIPHFPLVTLMLRSMRRYPASPQFGPHELRTIQ 381
>gb|BE420653.1|BE420653 HWM001.B06 ITEC HWM Barley Leaf Library Hordeum vulgare subsp.
vulgare cDNA clone HWM001.B06, mRNA sequence
Length = 1252
Score = 170 bits (365), Expect(3) = 3e-064
Identities = 68/110 (61%), Positives = 84/110 (76%)
Frame = -2 / +3
Query: 653 KNEKVATIDGLVEVASNNETALQEAVAIQPVSVAIDAGGRAFQHYSSGIFNGPCGTSLDH 474
KN KV TIDG + N+E +LQ AVA QP+SVAI+AGGRAFQ Y SGIF G CGT+LDH
Sbjct: 306 KNAKVVTIDGYEDAPVNSEKSLQNAVANQPISVAIEAGGRAFQLYKSGIFTGTCGTALDH 485
Query: 473 GVTAVGYGSESGKDYWIVKNSWSASWGEAGYIRMRRNVPRPTGKCGIAMD 324
GV AVGYG+E+GKDY +V+ SW + WG+ GYIRM + +GKCGIA++
Sbjct: 486 GVAAVGYGTENGKDYRLVRYSWGSVWGQDGYIRMDAYIQASSGKCGIAVE 635
Score = 94.5 bits (200), Expect(4) = 3e-035
Identities = 38/72 (52%), Positives = 48/72 (66%)
Frame = +1 / -1
Query: 460 TAVTPWSRLVPHGPLKMPEL*CWNARPPASMATLTGWIATASCSAVSLLLATSTNPSMVA 639
TA TPWS VP P+K+P+L* WNA PPAS+ATL GW ATA C SL S+ PSMV
Sbjct: 499 TAATPWSSAVPQVPVKIPDL*SWNALPPASIATLMGWFATAFCRLFSLFTGASSYPSMVT 320
Query: 640 TFSFFSLLASQV 675
T +F + + ++
Sbjct: 319 TLAFLVVASQRL 284
Score = 65.2 bits (136), Expect(3) = 3e-064
Identities = 23/42 (54%), Positives = 33/42 (78%)
Frame = -2 / +2
Query: 920 VTEVKDQQQCGGCWAFSAVAAIEGVNAIATGNLVSLSEQEII 795
+ + KDQ CG WAFSA+AA+EG+N I TG+++ LSEQE++
Sbjct: 38 IRQSKDQGGCGSRWAFSAIAAVEGINQIVTGDMIPLSEQELV 163
Score = 50.1 bits (103), Expect(3) = 3e-064
Identities = 19/47 (40%), Positives = 29/47 (61%)
Frame = -2 / +3
Query: 779 DSGCDGGQMENAFRFVIGNGGIDTEADYPFIGTDGTCDASKEKNEKV 639
+ GC+GG M+ A + NGGID++ DYP+ D CDA+ + + V
Sbjct: 183 NQGCNGGLMDYASDPITNNGGIDSDEDYPYKERDNRCDATTKNAKVV 323
Score = 39.6 bits (80), Expect(4) = 3e-035
Identities = 19/36 (52%), Positives = 19/36 (52%)
Frame = +1 / -2
Query: 802 SCSDSDTRLPVAIAFTPSMAATAENAQHPPHCCWSL 909
SCSD PV I PS AA AE AQ P WSL
Sbjct: 156 SCSDRGIMSPVTIWLMPSTAAIAEKAQRLPQPPWSL 49
Score = 37.7 bits (76), Expect(4) = 3e-035
Identities = 20/41 (48%), Positives = 27/41 (65%)
Frame = +1 / -1
Query: 652 FSLLASQVPSVPMKG*SASVSIPPLPMTNRNAFSICPPSQP 774
F ++ASQ S+ + G*S+S SIPPL + +A SI PP P
Sbjct: 310 FLVVASQRLSLSL*G*SSSESIPPLLVMGSDA*SIRPPLHP 188
Score = 33.1 bits (66), Expect(4) = 3e-035
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +1 / -1
Query: 322 ASMAMPHLPVGRGTLRLMRM*PASPQLALHEFFT 423
+S A+PHLP+ +RM*P+ PQ E+ T
Sbjct: 637 SSTAIPHLPLDAWMYASIRM*PSCPQTLPQEYLT 536
>gb|BM815947.1|BM815947 HC01D05_T3.ab1 HC Hordeum vulgare subsp. vulgare cDNA clone
HC01D05_T3.ab1 similar to Leucyl
aminopeptidase,Cathepsin B,Glutamyl
aminopeptidase,Cathepsin D,Xaa-Pro dipeptidase,Cathepsin
E,Cathepsin G,Endopeptidase So,Cathepsin H,Cathepsin
K,Cathepsin L,Xaa-Pro aminopeptidase,Methionyl
aminopeptidase,Meprin A,Neprilysin, mRNA sequence
Length = 812
Score = 203 bits (437), Expect(2) = 1e-062
Identities = 79/125 (63%), Positives = 98/125 (78%)
Frame = -2 / +2
Query: 662 SKEKNEKVATIDGLVEVASNNETALQEAVAIQPVSVAIDAGGRAFQHYSSGIFNGPCGTS 483
+ +KN KV TIDG +V N+E +LQ+AVA QP+SVAI+AGGRAFQ Y SGIF G CGT+
Sbjct: 104 ANKKNAKVVTIDGYEDVPVNSEKSLQKAVANQPISVAIEAGGRAFQLYKSGIFTGTCGTA 283
Query: 482 LDHGVTAVGYGSESGKDYWIVKNSWSASWGEAGYIRMRRNVPRPTGKCGIAMDASYPVKD 303
LDHGV AVGYG+E+GKDYW+V+NSW + WGE GYIRM RN+ +GKCGIA++ SYP K
Sbjct: 284 LDHGVAAVGYGTENGKDYWLVRNSWGSVWGEDGYIRMERNIKASSGKCGIAVEPSYPTKT 463
Query: 302 TYHDP 288
+ P
Sbjct: 464 GENPP 478
Score = 100 bits (214), Expect(3) = 2e-037
Identities = 41/72 (56%), Positives = 50/72 (69%)
Frame = +1 / -3
Query: 460 TAVTPWSRLVPHGPLKMPEL*CWNARPPASMATLTGWIATASCSAVSLLLATSTNPSMVA 639
TA TPWS VP P+K+P+L* WNA PPAS+ATL GW ATA C SL TS+ PSMV
Sbjct: 306 TAATPWSSAVPQVPVKIPDL*SWNALPPASIATLMGWFATAFCRLFSLFTGTSSYPSMVT 127
Query: 640 TFSFFSLLASQV 675
T +FF L + ++
Sbjct: 126 TLAFFLLASQRL 91
Score = 58.3 bits (121), Expect(2) = 1e-062
Identities = 22/43 (51%), Positives = 30/43 (69%)
Frame = -2 / +2
Query: 767 DGGQMENAFRFVIGNGGIDTEADYPFIGTDGTCDASKEKNEKV 639
+GG M+ AF F+I NGGID+E DYP+ D CDA+K+ + V
Sbjct: 2 NGGLMDYAFEFIINNGGIDSEEDYPYKERDNRCDANKKNAKVV 130
Score = 48.7 bits (100), Expect(3) = 2e-037
Identities = 22/41 (53%), Positives = 27/41 (65%)
Frame = +1 / -3
Query: 307 FTG*DASMAMPHLPVGRGTLRLMRM*PASPQLALHEFFTIQ 429
F G*+ S A+PHLP+ LR +RM*P+SPQ EF T Q
Sbjct: 459 FVG*EGSTAIPHLPLDALMLRSIRM*PSSPQTLPQEFLTSQ 337
Score = 45.1 bits (92), Expect(3) = 2e-037
Identities = 24/38 (63%), Positives = 27/38 (71%)
Frame = +1 / -3
Query: 652 FSLLASQVPSVPMKG*SASVSIPPLPMTNRNAFSICPP 765
F LLASQ S+ + G*S+S SIPPL M N NA SI PP
Sbjct: 117 FFLLASQRLSLSL*G*SSSESIPPLLMMNSNA*SIRPP 4
>gb|AF134153.1|AF134153 Hordeum vulgare cysteine protease mRNA, partial cds
Length = 490
Score = 143 bits (307), Expect(3) = 9e-062
Identities = 56/82 (68%), Positives = 69/82 (84%)
Frame = -2 / +3
Query: 653 KNEKVATIDGLVEVASNNETALQEAVAIQPVSVAIDAGGRAFQHYSSGIFNGPCGTSLDH 474
+N KV +IDG +V N+E +LQ+AVA QPVSVAI+AGGR FQ Y SG+F+G CGTSLDH
Sbjct: 243 ENAKVVSIDGFEDVPQNDEKSLQKAVAHQPVSVAIEAGGREFQLYHSGVFSGRCGTSLDH 422
Query: 473 GVTAVGYGSESGKDYWIVKNSW 408
GV AVGYG+++GKDYWIV+NSW
Sbjct: 423 GVVAVGYGTDNGKDYWIVRNSW 488
Score = 100 bits (213), Expect(3) = 2e-031
Identities = 43/69 (62%), Positives = 50/69 (72%)
Frame = +1 / -1
Query: 460 TAVTPWSRLVPHGPLKMPEL*CWNARPPASMATLTGWIATASCSAVSLLLATSTNPSMVA 639
TA TPWSRLVPH PLK PE * WN+RPPAS+ATLTGW ATA S S TS+ PSM+
Sbjct: 436 TATTPWSRLVPHLPLKTPE**SWNSRPPASIATLTGWCATAF*SDFSSFWGTSSKPSMLT 257
Query: 640 TFSFFSLLA 666
T +F L++
Sbjct: 256 TLAFSLLMS 230
Score = 74.4 bits (156), Expect(3) = 9e-062
Identities = 27/51 (52%), Positives = 38/51 (74%)
Frame = -2 / +3
Query: 788 DAQDSGCDGGQMENAFRFVIGNGGIDTEADYPFIGTDGTCDASKEKNEKVA 636
+ Q+SGC+GG M++AF F+I NGGIDTE DYP+ DG CD ++E + V+
Sbjct: 111 NGQNSGCNGGLMDDAFDFIIKNGGIDTEEDYPYKAVDGKCDINRENAKVVS 263
Score = 59.3 bits (123), Expect(3) = 9e-062
Identities = 18/34 (52%), Positives = 28/34 (82%)
Frame = -2 / +3
Query: 890 GGCWAFSAVAAIEGVNAIATGNLVSLSEQEIIDC 789
G CWAFSAV+ +E +N + TG +++LSEQE+++C
Sbjct: 3 GSCWAFSAVSTVESINQLVTGEMITLSEQELVEC 104
Score = 50.1 bits (103), Expect(3) = 2e-031
Identities = 23/42 (54%), Positives = 28/42 (66%)
Frame = +1 / -1
Query: 652 FSLLASQVPSVPMKG*SASVSIPPLPMTNRNAFSICPPSQPL 777
FSLL S +PS + G*S+SVS+PP M A S+ PP QPL
Sbjct: 247 FSLLMSHLPSTAL*G*SSSVSMPPFLMMKSKASSMSPPLQPL 122
Score = 24.4 bits (47), Expect(3) = 2e-031
Identities = 14/33 (42%), Positives = 15/33 (45%)
Frame = +1 / -1
Query: 793 SMISCSDSDTRLPVAIAFTPSMAATAENAQHPP 891
S SCSD+ PV S TAE AQ P
Sbjct: 100 STSSCSDNVIISPVTSWLMLSTVLTAEKAQQLP 2
>gb|CA013849.1|CA013849 HT09K13r HT Hordeum vulgare subsp. vulgare cDNA clone HT09K13
5-PRIME, mRNA sequence
Length = 632
Score = 92.7 bits (196), Expect(4) = 9e-062
Identities = 38/64 (59%), Positives = 45/64 (70%)
Frame = -2 / +3
Query: 641 VATIDGLVEVASNNETALQEAVAIQPVSVAIDAGGRAFQHYSSGIFNGPCGTSLDHGVTA 462
V IDG +V +N+E L AVA QPVSVA++A G+AF YS G+F G CGT LDHGV
Sbjct: 330 VVHIDGHQDVPANSEEDLARAVANQPVSVAVEASGKAFMFYSEGVFTGECGTELDHGVAV 509
Query: 461 VGYG 450
VGYG
Sbjct: 510 VGYG 521
Score = 88.6 bits (187), Expect(4) = 9e-062
Identities = 34/52 (65%), Positives = 41/52 (78%)
Frame = -2 / +3
Query: 929 LGAVTEVKDQQQCGGCWAFSAVAAIEGVNAIATGNLVSLSEQEIIDCDAQDS 774
L T VKDQ +CG CWAFS V ++EG+NAI TG+LVSLSEQE+IDCD D+
Sbjct: 33 LSLSTGVKDQGKCGSCWAFSTVVSVEGINAIRTGSLVSLSEQELIDCDTADN 188
Score = 68.0 bits (142), Expect(4) = 9e-033
Identities = 33/65 (50%), Positives = 36/65 (55%)
Frame = +1 / -2
Query: 460 TAVTPWSRLVPHGPLKMPEL*CWNARPPASMATLTGWIATASCSAVSLLLATSTNPSMVA 639
T TPWS VPH P+ P * NA P AS AT TGW ATA + SLL TS PS+
Sbjct: 511 TTATPWSSSVPHSPVNTPSE*NMNAFPLASTATDTGWFATALARSSSLLAGTSWCPSICT 332
Query: 640 TFSFF 654
T F
Sbjct: 331 TTGEF 317
Score = 67.5 bits (141), Expect(4) = 9e-033
Identities = 30/48 (62%), Positives = 32/48 (66%)
Frame = +1 / -2
Query: 775 LSWASQSMISCSDSDTRLPVAIAFTPSMAATAENAQHPPHCCWSLTSV 918
LS SQSM SCS+ DTRLPV +A PS T ENAQ PH WSLT V
Sbjct: 187 LSAVSQSMSSCSERDTRLPVRMALMPSTDTTVENAQQLPHLPWSLTPV 44
Score = 58.3 bits (121), Expect(4) = 9e-062
Identities = 20/43 (46%), Positives = 29/43 (67%)
Frame = -2 / +3
Query: 785 AQDSGCDGGQMENAFRFVIGNGGIDTEADYPFIGTDGTCDASK 657
A + GC GG M+NAF ++ NGG+ TEA YP+ GTC+ ++
Sbjct: 180 ADNDGCQGGLMDNAFEYIKNNGGLITEAAYPYRAARGTCNVAR 308
Score = 55.6 bits (115), Expect(4) = 9e-062
Identities = 19/29 (65%), Positives = 22/29 (75%)
Frame = -2 / +3
Query: 449 SESGKDYWIVKNSWSASWGEAGYIRMRRN 363
SE GK YW VKNSW SWGE GYIR+ ++
Sbjct: 525 SEDGKAYWTVKNSWGPSWGEQGYIRVEKD 611
Score = 33.1 bits (66), Expect(4) = 9e-033
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = +1 / -2
Query: 655 SLLASQVPSVPMKG*SASVSIPPLPMTNRNAFSICPPSQP 774
+L QVP G*+ASV PPL + A S+ PP P
Sbjct: 310 ALATLQVPLAARYG*AASVISPPLFLMYSKALSMSPPWHP 191
Score = 28.1 bits (55), Expect(4) = 9e-033
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +1 / -2
Query: 379 M*PASPQLALHEFFTIQ 429
M*P SP HEFFT+Q
Sbjct: 595 M*PCSPHDGPHEFFTVQ 545
>emb|Z97021.1|HVZ97021 Hordeum vulgare gene encoding cysteine endopeptidase EP-A
Length = 2752
Score = 83.5 bits (176), Expect(8) = 2e-061
Identities = 31/52 (59%), Positives = 34/52 (65%)
Frame = -2 / +1
Query: 449 SESGKDYWIVKNSWSASWGEAGYIRMRRNVPRPTGKCGIAMDASYPVKDTYH 294
+ G YWIVKNSW WGE GYIRM+R V + G CGIAM ASYP K H
Sbjct: 2320 TRDGTKYWIVKNSWGEDWGEKGYIRMQRGVSQTEGLCGIAMQASYPTKSAPH 2475
Score = 68.0 bits (142), Expect(8) = 2e-061
Identities = 24/35 (68%), Positives = 29/35 (82%)
Frame = -2 / +1
Query: 890 GGCWAFSAVAAIEGVNAIATGNLVSLSEQEIIDCD 786
G CWAFS + A+EG+N I TG LVSLSEQE++DCD
Sbjct: 1696 GSCWAFSTIVAVEGINKIRTGKLVSLSEQELMDCD 1800
Score = 65.2 bits (136), Expect(8) = 2e-061
Identities = 28/47 (59%), Positives = 37/47 (78%)
Frame = -2 / +3
Query: 656 EKNEKVATIDGLVEVASNNETALQEAVAIQPVSVAIDAGGRAFQHYS 516
++N + TIDG +V +N+E+ALQ+AVA QPVSVAIDA G+ FQ YS
Sbjct: 2028 QENAQAVTIDGYEDVPANDESALQKAVAGQPVSVAIDASGQDFQFYS 2168
Score = 51.0 bits (105), Expect(8) = 2e-061
Identities = 18/26 (69%), Positives = 21/26 (80%)
Frame = -2 / +3
Query: 959 DLPDAIDWRQLGAVTEVKDQQQCGGC 882
+LP A+DWRQ GAVT +KDQ QCG C
Sbjct: 1497 NLPPAVDWRQKGAVTAIKDQGQCGTC 1574
Score = 34.5 bits (69), Expect(8) = 2e-061
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -2 / +1
Query: 731 IGNGGIDTEADYPFIGTDGTCDASK 657
I GI TE++YP+ G G+CD +K
Sbjct: 1855 IQKNGITTESNYPYQGEQGSCDQAK 1929
Score = 30.9 bits (61), Expect(8) = 2e-061
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -2 / +1
Query: 788 DAQDSGCDGGQMENAFRFVIGNG 720
+ + GC+GG M+ AF+F+ NG
Sbjct: 1801 NVNNQGCEGGLMDYAFQFIQKNG 1869
Score = 28.6 bits (56), Expect(8) = 2e-061
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -2 / +3
Query: 1088 FRLGLTPFADLTLEEYRGRVLG 1023
FRL L FAD+T +E+R G
Sbjct: 1356 FRLALNKFADMTTDEFRRTYAG 1421
Score = 22.6 bits (43), Expect(8) = 2e-061
Identities = 6/16 (37%), Positives = 12/16 (75%)
Frame = -2 / +3
Query: 1289 ADEEVRRMYEAWKSKH 1242
++E +R +YE W+S +
Sbjct: 1203 SEESLRGLYERWRSHY 1250
>gb|BJ472478.1|BJ472478 BJ472478 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal34m03 5', mRNA sequence
Length = 618
Score = 104 bits (222), Expect(3) = 8e-061
Identities = 36/58 (62%), Positives = 49/58 (84%)
Frame = -2 / +1
Query: 959 DLPDAIDWRQLGAVTEVKDQQQCGGCWAFSAVAAIEGVNAIATGNLVSLSEQEIIDCD 786
+LP+++DWR+ GAV VKDQ CG CWAFSA+AA+EG+N I TG+++ LSEQE++DCD
Sbjct: 124 ELPESVDWRKKGAVGAVKDQGGCGSCWAFSAIAAVEGINQIVTGDMIPLSEQELVDCD 297
Score = 103 bits (220), Expect(3) = 8e-061
Identities = 43/65 (66%), Positives = 52/65 (80%)
Frame = -2 / +1
Query: 662 SKEKNEKVATIDGLVEVASNNETALQEAVAIQPVSVAIDAGGRAFQHYSSGIFNGPCGTS 483
+ +KN KV TIDG +V N+E +LQ+AVA QP+SVAI+AGGRAFQ Y SGIF G CGT+
Sbjct: 421 ANKKNAKVVTIDGYEDVPVNSEKSLQKAVANQPISVAIEAGGRAFQLYKSGIFTGTCGTA 600
Query: 482 LDHGV 468
LDHGV
Sbjct: 601 LDHGV 615
Score = 96.8 bits (205), Expect(3) = 7e-040
Identities = 39/69 (56%), Positives = 48/69 (69%)
Frame = +1 / -2
Query: 469 TPWSRLVPHGPLKMPEL*CWNARPPASMATLTGWIATASCSAVSLLLATSTNPSMVATFS 648
TPWS VP P+K+P+L* WNA PPAS+ATL GW ATA C SL TS+ PSMV T +
Sbjct: 614 TPWSSAVPQVPVKIPDL*SWNALPPASIATLMGWFATAFCRLFSLFTGTSSYPSMVTTLA 435
Query: 649 FFSLLASQV 675
FF L + ++
Sbjct: 434 FFLLASQRL 408
Score = 65.7 bits (137), Expect(3) = 8e-061
Identities = 24/47 (51%), Positives = 33/47 (70%)
Frame = -2 / +1
Query: 779 DSGCDGGQMENAFRFVIGNGGIDTEADYPFIGTDGTCDASKEKNEKV 639
+ GC+GG M+ AF F+I NGGID+E DYP+ D CDA+K+ + V
Sbjct: 307 NQGCNGGLMDYAFEFIINNGGIDSEEDYPYKERDNRCDANKKNAKVV 447
Score = 59.3 bits (123), Expect(3) = 7e-040
Identities = 30/56 (53%), Positives = 32/56 (57%)
Frame = +1 / -2
Query: 787 SQSMISCSDSDTRLPVAIAFTPSMAATAENAQHPPHCCWSLTSVTAPSWRQSMASG 954
SQS SCSD PV I PS AA AE AQ P WSLT+ TAP + QS SG
Sbjct: 296 SQSTSSCSDRGIMSPVTIWLMPSTAAIAEKAQQLPQPPWSLTAPTAPFFLQSTDSG 129
Score = 47.3 bits (97), Expect(3) = 7e-040
Identities = 25/41 (60%), Positives = 28/41 (68%)
Frame = +1 / -2
Query: 652 FSLLASQVPSVPMKG*SASVSIPPLPMTNRNAFSICPPSQP 774
F LLASQ S+ + G*S+S SIPPL M N NA SI PP P
Sbjct: 434 FFLLASQRLSLSL*G*SSSESIPPLLMMNSNA*SIRPPLHP 312
>gb|BG414819.1|BG414819 HVSMEk0003N11f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0003N11f, mRNA sequence
Length = 623
Score = 119 bits (255), Expect(5) = 1e-059
Identities = 45/77 (58%), Positives = 53/77 (68%)
Frame = -2 / +2
Query: 566 PVSVAIDAGGRAFQHYSSGIFNGPCGTSLDHGVTAVGYGSESGKDYWIVKNSWSASWGEA 387
PVSVAI+AGGR FQ Y SG+F+G CG+ L HGV AVG+G++ KDYW V NSW +WGEA
Sbjct: 344 PVSVAIEAGGREFQLYHSGVFSGRCGSQLHHGVVAVGFGTDKRKDYWFVPNSWGPNWGEA 523
Query: 386 GYIRMRRNVPRPTGKCG 336
GY RP G G
Sbjct: 524 GYFPWSATSTRPLGSAG 574
Score = 89.0 bits (188), Expect(4) = 5e-033
Identities = 42/78 (53%), Positives = 44/78 (56%)
Frame = +1 / -3
Query: 337 PHLPVGRGTLRLMRM*PASPQLALHEFFTIQXXXXXXXXXXTAVTPWSRLVPHGPLKMPE 516
P LP GR + L PASPQ HE T Q TA TPW PH PLK PE
Sbjct: 573 PALPNGRVDVALHGKYPASPQFGPHELGTNQ*SLRLSVPKPTATTPWWSCDPHLPLKTPE 394
Query: 517 L*CWNARPPASMATLTGW 570
* WN+RPPASMATLTGW
Sbjct: 393 W*SWNSRPPASMATLTGW 340
Score = 73.9 bits (155), Expect(5) = 1e-059
Identities = 27/53 (50%), Positives = 37/53 (69%)
Frame = -2 / +1
Query: 794 DCDAQDSGCDGGQMENAFRFVIGNGGIDTEADYPFIGTDGTCDASKEKNEKVA 636
D + Q SGC+GG M++AF F+I NGGIDTE DYP+ DG CD ++ + V+
Sbjct: 118 DINGQSSGCNGGLMDDAFEFIIKNGGIDTEDDYPYKAVDGRCDVLRKNAKVVS 276
Score = 49.6 bits (102), Expect(4) = 5e-033
Identities = 27/56 (48%), Positives = 32/56 (57%)
Frame = +1 / -1
Query: 652 FSLLASQVPSVPMKG*SASVSIPPLPMTNRNAFSICPPSQPLSWASQSMISCSDSD 819
F L S +PS + G*S+SVS+PP M N A SI PP QPL S + S SD
Sbjct: 260 FFLRTSHLPSTAL*G*SSSVSMPPFFMMNSKASSIRPPLQPLLCPLMSHSTSSCSD 93
Score = 40.5 bits (82), Expect(5) = 1e-059
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = -2 / +3
Query: 902 QQQCGGCWAFSAVAAIEGVNA 840
Q QCG CWAFSAV+ +E ++A
Sbjct: 3 QGQCGSCWAFSAVSTVESISA 65
Score = 38.2 bits (77), Expect(5) = 1e-059
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = -2 / +1
Query: 653 KNEKVATIDGLVEVASNNETALQEAVAIQP 564
KN KV +IDG +V N+E +LQ+AVA P
Sbjct: 256 KNAKVVSIDGFEDVPENDEKSLQKAVASPP 345
Score = 36.3 bits (73), Expect(4) = 5e-033
Identities = 16/30 (53%), Positives = 19/30 (63%)
Frame = +1 / -1
Query: 565 GWIATASCSAVSLLLATSTNPSMVATFSFF 654
G ATA CS S TS+ PSM+ TF+FF
Sbjct: 344 GGEATAFCSDFSSFSGTSSKPSMLTTFAFF 255
Score = 33.6 bits (67), Expect(5) = 1e-059
Identities = 11/18 (61%), Positives = 16/18 (88%)
Frame = -2 / +1
Query: 839 IATGNLVSLSEQEIIDCD 786
I TG +V+LSEQE+++CD
Sbjct: 67 IVTGEMVTLSEQELVECD 120
Score = 22.6 bits (43), Expect(4) = 5e-033
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +1 / -2
Query: 853 SMAATAENAQHPPHCCW 903
S TAE AQ PH W
Sbjct: 52 STVLTAEKAQQLPHWPW 2
>gb|BI951599.1|BI951599 HVSMEm0001J09f Hordeum vulgare green seedling EST library
HVcDNA0014 (Blumeria infected) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEm0001J09f, mRNA sequence
Length = 826
Score = 104 bits (222), Expect(5) = 2e-059
Identities = 36/58 (62%), Positives = 49/58 (84%)
Frame = -2 / +2
Query: 959 DLPDAIDWRQLGAVTEVKDQQQCGGCWAFSAVAAIEGVNAIATGNLVSLSEQEIIDCD 786
+LP+++DWR+ GAV VKDQ CG CWAFSA+AA+EG+N I TG+++ LSEQE++DCD
Sbjct: 38 ELPESVDWRKKGAVGAVKDQGGCGSCWAFSAIAAVEGINQIVTGDMIPLSEQELVDCD 211
Score = 69.3 bits (145), Expect(3) = 8e-032
Identities = 28/50 (56%), Positives = 34/50 (68%)
Frame = +1 / -2
Query: 526 WNARPPASMATLTGWIATASCSAVSLLLATSTNPSMVATFSFFSLLASQV 675
WNA PPAS+ATL GW ATA C SL TS+ PSMV T +FF L + ++
Sbjct: 471 WNALPPASIATLMGWFATAFCRLFSLFTGTSSYPSMVTTLAFFLLASQRL 322
Score = 68.0 bits (142), Expect(5) = 2e-059
Identities = 29/46 (63%), Positives = 37/46 (80%)
Frame = -2 / +2
Query: 662 SKEKNEKVATIDGLVEVASNNETALQEAVAIQPVSVAIDAGGRAFQ 525
+ +KN KV TIDG +V N+E +LQ+AVA QP+SVAI+AGGRAFQ
Sbjct: 335 ANKKNAKVVTIDGYEDVPVNSEKSLQKAVANQPISVAIEAGGRAFQ 472
Score = 65.7 bits (137), Expect(5) = 2e-059
Identities = 24/47 (51%), Positives = 33/47 (70%)
Frame = -2 / +2
Query: 779 DSGCDGGQMENAFRFVIGNGGIDTEADYPFIGTDGTCDASKEKNEKV 639
+ GC+GG M+ AF F+I NGGID+E DYP+ D CDA+K+ + V
Sbjct: 221 NQGCNGGLMDYAFEFIINNGGIDSEEDYPYKERDNRCDANKKNAKVV 361
Score = 59.3 bits (123), Expect(3) = 8e-032
Identities = 30/56 (53%), Positives = 32/56 (57%)
Frame = +1 / -2
Query: 787 SQSMISCSDSDTRLPVAIAFTPSMAATAENAQHPPHCCWSLTSVTAPSWRQSMASG 954
SQS SCSD PV I PS AA AE AQ P WSLT+ TAP + QS SG
Sbjct: 210 SQSTSSCSDRGIMSPVTIWLMPSTAAIAEKAQQLPQPPWSLTAPTAPFFLQSTDSG 43
Score = 47.3 bits (97), Expect(3) = 8e-032
Identities = 25/41 (60%), Positives = 28/41 (68%)
Frame = +1 / -2
Query: 652 FSLLASQVPSVPMKG*SASVSIPPLPMTNRNAFSICPPSQP 774
F LLASQ S+ + G*S+S SIPPL M N NA SI PP P
Sbjct: 348 FFLLASQRLSLSL*G*SSSESIPPLLMMNSNA*SIRPPLHP 226
Score = 35.9 bits (72), Expect(5) = 2e-059
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = -2 / +1
Query: 512 GIFNGPCGTSLDHGVTAVGYGSESGK 435
G F G CG +DHGV AV G + G+
Sbjct: 484 GFFAGTCGRGVDHGVAAVVLGQKMGR 561
Score = 31.3 bits (62), Expect(5) = 2e-059
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = -2 / +3
Query: 455 YGSESGKDYWIVKNSW 408
+GS++GK YW+ NSW
Sbjct: 540 FGSKNGKGYWVRGNSW 587
>gb|BQ471297.1|BQ471297 HV02B01r HV Hordeum vulgare subsp. vulgare cDNA clone HV02B01
5-PRIME, mRNA sequence
Length = 580
Score = 115 bits (245), Expect(3) = 2e-058
Identities = 43/62 (69%), Positives = 52/62 (83%)
Frame = -2 / +2
Query: 959 DLPDAIDWRQLGAVTEVKDQQQCGGCWAFSAVAAIEGVNAIATGNLVSLSEQEIIDCDAQ 780
DLP ++DWRQ GAVT VKDQ +CG CWAFS V ++EG+NAI TG+LVSLSEQE+IDCD
Sbjct: 29 DLPPSVDWRQKGAVTGVKDQGKCGSCWAFSTVVSVEGINAIRTGSLVSLSEQELIDCDTA 208
Query: 779 DS 774
D+
Sbjct: 209 DN 214
Score = 92.7 bits (196), Expect(3) = 2e-058
Identities = 38/64 (59%), Positives = 45/64 (70%)
Frame = -2 / +2
Query: 641 VATIDGLVEVASNNETALQEAVAIQPVSVAIDAGGRAFQHYSSGIFNGPCGTSLDHGVTA 462
V IDG +V +N+E L AVA QPVSVA++A G+AF YS G+F G CGT LDHGV
Sbjct: 356 VVHIDGHQDVPANSEEDLARAVANQPVSVAVEASGKAFMFYSEGVFTGECGTELDHGVAV 535
Query: 461 VGYG 450
VGYG
Sbjct: 536 VGYG 547
Score = 80.8 bits (170), Expect(3) = 2e-033
Identities = 37/60 (61%), Positives = 39/60 (65%)
Frame = +1 / -2
Query: 775 LSWASQSMISCSDSDTRLPVAIAFTPSMAATAENAQHPPHCCWSLTSVTAPSWRQSMASG 954
LS SQSM SCS+ DTRLPV +A PS T ENAQ PH WSLT VTAP RQS G
Sbjct: 213 LSAVSQSMSSCSERDTRLPVRMALMPSTDTTVENAQQLPHLPWSLTPVTAPFCRQSTDGG 34
Score = 68.0 bits (142), Expect(3) = 2e-033
Identities = 33/65 (50%), Positives = 36/65 (55%)
Frame = +1 / -2
Query: 460 TAVTPWSRLVPHGPLKMPEL*CWNARPPASMATLTGWIATASCSAVSLLLATSTNPSMVA 639
T TPWS VPH P+ P * NA P AS AT TGW ATA + SLL TS PS+
Sbjct: 537 TTATPWSSSVPHSPVNTPSE*NMNAFPLASTATDTGWFATALARSSSLLAGTSWCPSICT 358
Query: 640 TFSFF 654
T F
Sbjct: 357 TTGEF 343
Score = 58.3 bits (121), Expect(3) = 2e-058
Identities = 20/43 (46%), Positives = 29/43 (67%)
Frame = -2 / +2
Query: 785 AQDSGCDGGQMENAFRFVIGNGGIDTEADYPFIGTDGTCDASK 657
A + GC GG M+NAF ++ NGG+ TEA YP+ GTC+ ++
Sbjct: 206 ADNDGCQGGLMDNAFEYIKNNGGLITEAAYPYRAARGTCNVAR 334
Score = 33.1 bits (66), Expect(3) = 2e-033
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = +1 / -2
Query: 655 SLLASQVPSVPMKG*SASVSIPPLPMTNRNAFSICPPSQP 774
+L QVP G*+ASV PPL + A S+ PP P
Sbjct: 336 ALATLQVPLAARYG*AASVISPPLFLMYSKALSMSPPWHP 217
>gb|CA008506.1|CA008506 HU11C21r HU Hordeum vulgare subsp. vulgare cDNA clone HU11C21
5-PRIME, mRNA sequence
Length = 481
Score = 199 bits (428), Expect(2) = 5e-058
Identities = 79/125 (63%), Positives = 96/125 (76%)
Frame = -2 / +1
Query: 653 KNEKVATIDGLVEVASNNETALQEAVAIQPVSVAIDAGGRAFQHYSSGIFNGPCGTSLDH 474
KN KV +IDG +V N+E +LQ+AVA PVSVAI+AGGR FQ Y SG+F+G CGT LDH
Sbjct: 94 KNAKVVSIDGFEDVPENDEKSLQKAVAHHPVSVAIEAGGREFQLYHSGVFSGRCGTQLDH 273
Query: 473 GVTAVGYGSESGKDYWIVKNSWSASWGEAGYIRMRRNVPRPTGKCGIAMDASYPVKDTYH 294
GV AVGYG+E+GKDYWIV+NSW +WGEAGY+RM RN+ +GKCGIAM +SYP K +
Sbjct: 274 GVVAVGYGTENGKDYWIVRNSWGPNWGEAGYLRMERNINVTSGKCGIAMMSSYPTKKGAN 453
Query: 293 DPGTA 279
P A
Sbjct: 454 PPKPA 468
Score = 106 bits (227), Expect(3) = 6e-034
Identities = 44/65 (67%), Positives = 48/65 (73%)
Frame = +1 / -3
Query: 460 TAVTPWSRLVPHGPLKMPEL*CWNARPPASMATLTGWIATASCSAVSLLLATSTNPSMVA 639
TA TPWS VPH PLK PE * WN+RPPASMATLTGW ATA CS S TS+ PSM+
Sbjct: 287 TATTPWSSCVPHLPLKTPEW*SWNSRPPASMATLTGW*ATAFCSDFSSFSGTSSKPSMLT 108
Query: 640 TFSFF 654
TF+FF
Sbjct: 107 TFAFF 93
Score = 46.9 bits (96), Expect(2) = 5e-058
Identities = 17/34 (50%), Positives = 23/34 (67%)
Frame = -2 / +1
Query: 737 FVIGNGGIDTEADYPFIGTDGTCDASKEKNEKVA 636
F+I NGGIDTE DYP+ DG CD ++ + V+
Sbjct: 13 FIIKNGGIDTEDDYPYKAVDGRCDVLRKNAKVVS 114
Score = 43.2 bits (88), Expect(3) = 6e-034
Identities = 21/39 (53%), Positives = 23/39 (58%)
Frame = +1 / -3
Query: 313 G*DASMAMPHLPVGRGTLRLMRM*PASPQLALHEFFTIQ 429
G D MA+PH P+ LR MR PASPQ HE TIQ
Sbjct: 434 GYDDIMAIPHFPLVTLMLRSMRRYPASPQFGPHELRTIQ 318
Score = 33.1 bits (66), Expect(3) = 6e-034
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +1 / -3
Query: 652 FSLLASQVPSVPMKG*SASVSIPPLPMTNRNA 747
F L S +PS + G*S+SVS+PP M N A
Sbjct: 98 FFLRTSHLPSTAL*G*SSSVSMPPFFMMNPRA 3
>gb|BJ470713.1|BJ470713 BJ470713 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal26c09 5', mRNA sequence
Length = 618
Score = 104 bits (222), Expect(4) = 6e-058
Identities = 36/58 (62%), Positives = 49/58 (84%)
Frame = -2 / +3
Query: 959 DLPDAIDWRQLGAVTEVKDQQQCGGCWAFSAVAAIEGVNAIATGNLVSLSEQEIIDCD 786
+LP+++DWR+ GAV VKDQ CG CWAFSA+AA+EG+N I TG+++ LSEQE++DCD
Sbjct: 168 ELPESVDWRKKGAVGAVKDQGGCGSCWAFSAIAAVEGINQIVTGDMIPLSEQELVDCD 341
Score = 75.3 bits (158), Expect(4) = 2e-037
Identities = 31/55 (56%), Positives = 38/55 (69%)
Frame = +1 / -3
Query: 511 PEL*CWNARPPASMATLTGWIATASCSAVSLLLATSTNPSMVATFSFFSLLASQV 675
P+L* WNA PPAS+ATL GW ATA C SL TS+ PSMV T +FF L + ++
Sbjct: 616 PDL*SWNALPPASIATLMGWFATAFCRLFSLFTGTSSYPSMVTTLAFFLLASQRL 452
Score = 74.4 bits (156), Expect(4) = 6e-058
Identities = 32/51 (62%), Positives = 40/51 (78%)
Frame = -2 / +3
Query: 662 SKEKNEKVATIDGLVEVASNNETALQEAVAIQPVSVAIDAGGRAFQHYSSG 510
+ +KN KV TIDG +V N+E +LQ+AVA QP+SVAI+AGGRAFQ Y SG
Sbjct: 465 ANKKNAKVVTIDGYEDVPVNSEKSLQKAVANQPISVAIEAGGRAFQLYKSG 617
Score = 65.7 bits (137), Expect(4) = 6e-058
Identities = 24/47 (51%), Positives = 33/47 (70%)
Frame = -2 / +3
Query: 779 DSGCDGGQMENAFRFVIGNGGIDTEADYPFIGTDGTCDASKEKNEKV 639
+ GC+GG M+ AF F+I NGGID+E DYP+ D CDA+K+ + V
Sbjct: 351 NQGCNGGLMDYAFEFIINNGGIDSEEDYPYKERDNRCDANKKNAKVV 491
Score = 59.3 bits (123), Expect(4) = 2e-037
Identities = 30/56 (53%), Positives = 32/56 (57%)
Frame = +1 / -3
Query: 787 SQSMISCSDSDTRLPVAIAFTPSMAATAENAQHPPHCCWSLTSVTAPSWRQSMASG 954
SQS SCSD PV I PS AA AE AQ P WSLT+ TAP + QS SG
Sbjct: 340 SQSTSSCSDRGIMSPVTIWLMPSTAAIAEKAQQLPQPPWSLTAPTAPFFLQSTDSG 173
Score = 47.3 bits (97), Expect(4) = 2e-037
Identities = 25/41 (60%), Positives = 28/41 (68%)
Frame = +1 / -3
Query: 652 FSLLASQVPSVPMKG*SASVSIPPLPMTNRNAFSICPPSQP 774
F LLASQ S+ + G*S+S SIPPL M N NA SI PP P
Sbjct: 478 FFLLASQRLSLSL*G*SSSESIPPLLMMNSNA*SIRPPLHP 356
Score = 37.7 bits (76), Expect(4) = 6e-058
Identities = 16/23 (69%), Positives = 17/23 (73%)
Frame = -2 / +3
Query: 1091 TFRLGLTPFADLTLEEYRGRVLG 1023
+FRLGL FADLT EEYR LG
Sbjct: 36 SFRLGLNRFADLTNEEYRSTYLG 104
Score = 30.9 bits (61), Expect(4) = 2e-037
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = +1 / -3
Query: 1042 YSSRVRSAKGVRPRRK 1089
YSS VRSAK +RPRRK
Sbjct: 85 YSSLVRSAKRLRPRRK 38
>gb|CA020367.1|CA020367 HZ36B11r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ36B11
5-PRIME, mRNA sequence
Length = 543
Score = 104 bits (222), Expect(4) = 1e-056
Identities = 43/70 (61%), Positives = 53/70 (75%)
Frame = -2 / +1
Query: 656 EKNEKVATIDGLVEVASNNETALQEAVAIQPVSVAIDAGGRAFQHYSSGIFNGPCGTSLD 477
+K V TIDG +V +N+ETAL++AVA QPV+VAI+A G FQ YS G+F G CGT LD
Sbjct: 256 KKPSAVVTIDGYEDVPANDETALKKAVAAQPVAVAIEASGSHFQFYSEGVFAGKCGTELD 435
Query: 476 HGVTAVGYGS 447
HGV AVGYG+
Sbjct: 436 HGVAAVGYGT 465
Score = 84.5 bits (178), Expect(4) = 1e-056
Identities = 30/46 (65%), Positives = 38/46 (82%)
Frame = -2 / +1
Query: 911 VKDQQQCGGCWAFSAVAAIEGVNAIATGNLVSLSEQEIIDCDAQDS 774
VKDQ QCG CWAFS +AA+EG+NAI T NL SLSEQ+++DCD + +
Sbjct: 4 VKDQGQCGSCWAFSTIAAVEGINAIRTKNLTSLSEQQLVDCDTKSN 141
Score = 68.9 bits (144), Expect(3) = 4e-027
Identities = 37/67 (55%), Positives = 38/67 (56%)
Frame = +1 / -2
Query: 460 TAVTPWSRLVPHGPLKMPEL*CWNARPPASMATLTGWIATASCSAVSLLLATSTNPSMVA 639
TA TP S VPH P P * W P ASMAT TG ATA SAVS L TS+ PSMV
Sbjct: 452 TAATP*SSSVPHLPANTPSE*NWKCDPLASMATATGCAATAFFSAVSSLAGTSSYPSMVT 273
Query: 640 TFSFFSL 660
T F L
Sbjct: 272 TADGFLL 252
Score = 60.2 bits (125), Expect(3) = 4e-027
Identities = 27/51 (52%), Positives = 28/51 (54%)
Frame = +1 / -2
Query: 760 PPSQPLSWASQSMISCSDSDTRLPVAIAFTPSMAATAENAQHPPHCCWSLT 912
P L + SQS CSD D R V IA PS AA E AQ PHC WSLT
Sbjct: 155 PLQPALDFVSQSTSCCSDRDVRFLVRIALMPSTAAIVEKAQQLPHCPWSLT 3
Score = 50.1 bits (103), Expect(4) = 1e-056
Identities = 17/23 (73%), Positives = 17/23 (73%)
Frame = -2 / +1
Query: 440 GKDYWIVKNSWSASWGEAGYIRM 372
G YWIVKNSW WGE GYIRM
Sbjct: 475 GTKYWIVKNSWGPEWGEKGYIRM 543
Score = 39.1 bits (79), Expect(4) = 1e-056
Identities = 12/30 (40%), Positives = 22/30 (73%)
Frame = -2 / +1
Query: 779 DSGCDGGQMENAFRFVIGNGGIDTEADYPF 690
++GC+GG M+ AF+++ +GG+ E YP+
Sbjct: 139 NAGCNGGLMDYAFQYIAKHGGVAAEDAYPY 228
Score = 30.9 bits (61), Expect(3) = 4e-027
Identities = 13/19 (68%), Positives = 13/19 (68%)
Frame = +1 / -2
Query: 373 MRM*PASPQLALHEFFTIQ 429
MRM P SP HEFFTIQ
Sbjct: 542 MRMYPFSPHSGPHEFFTIQ 486
>gb|BQ464939.1|BQ464939 HU02D03r HU Hordeum vulgare subsp. vulgare cDNA clone HU02D03
5-PRIME, mRNA sequence
Length = 597
Score = 101 bits (216), Expect(3) = 1e-056
Identities = 35/58 (60%), Positives = 48/58 (82%)
Frame = -2 / +3
Query: 959 DLPDAIDWRQLGAVTEVKDQQQCGGCWAFSAVAAIEGVNAIATGNLVSLSEQEIIDCD 786
+LP+A+DWR+ GAV VK+Q QCG CWAFSAV+ +E +N I TG +V+LSEQE+++CD
Sbjct: 117 ELPEAVDWREKGAVAPVKNQGQCGSCWAFSAVSTVESINQIVTGEMVTLSEQELVECD 290
Score = 91.3 bits (193), Expect(2) = 1e-027
Identities = 38/56 (67%), Positives = 42/56 (75%)
Frame = +1 / -3
Query: 487 VPHGPLKMPEL*CWNARPPASMATLTGWIATASCSAVSLLLATSTNPSMVATFSFF 654
VPH PLK PE * WN+RPPASMATLTGW ATA CS S TS+ PSM+ TF+FF
Sbjct: 592 VPHLPLKTPEW*SWNSRPPASMATLTGW*ATAFCSDFSSFSGTSSKPSMLTTFAFF 425
Score = 84.0 bits (177), Expect(3) = 1e-056
Identities = 35/56 (62%), Positives = 43/56 (76%)
Frame = -2 / +3
Query: 653 KNEKVATIDGLVEVASNNETALQEAVAIQPVSVAIDAGGRAFQHYSSGIFNGPCGT 486
KN KV +IDG +V N+E +LQ+AVA PVSVAI+AGGR FQ Y SG+F+G CGT
Sbjct: 426 KNAKVVSIDGFEDVPENDEKSLQKAVAHHPVSVAIEAGGREFQLYHSGVFSGRCGT 593
Score = 73.9 bits (155), Expect(3) = 1e-056
Identities = 27/53 (50%), Positives = 37/53 (69%)
Frame = -2 / +3
Query: 794 DCDAQDSGCDGGQMENAFRFVIGNGGIDTEADYPFIGTDGTCDASKEKNEKVA 636
D + Q SGC+GG M++AF F+I NGGIDTE DYP+ DG CD ++ + V+
Sbjct: 288 DINGQSSGCNGGLMDDAFEFIIKNGGIDTEDDYPYKAVDGRCDVLRKNAKVVS 446
Score = 55.6 bits (115), Expect(2) = 1e-027
Identities = 29/56 (51%), Positives = 30/56 (53%)
Frame = +1 / -3
Query: 787 SQSMISCSDSDTRLPVAIAFTPSMAATAENAQHPPHCCWSLTSVTAPSWRQSMASG 954
S S SCSD+ T PV I S TAE AQ PH W LT TAP QS ASG
Sbjct: 289 SHSTSSCSDNVTISPVTIWLMLSTVLTAEKAQQLPHWPWFLTGATAPFSLQSTASG 122
>emb|Z97022.1|HVZ97022 Hordeum vulgare gene encoding cysteine proteinase
Length = 5593
Score = 66.6 bits (139), Expect(8) = 1e-056
Identities = 25/35 (71%), Positives = 30/35 (85%)
Frame = -2 / +2
Query: 890 GGCWAFSAVAAIEGVNAIATGNLVSLSEQEIIDCD 786
G CWAFSAVAA+EG+ I TG LVSLSEQ+++DCD
Sbjct: 4328 GCCWAFSAVAAVEGLTKIRTGRLVSLSEQQLVDCD 4432
Score = 64.3 bits (134), Expect(8) = 1e-056
Identities = 23/45 (51%), Positives = 30/45 (66%)
Frame = -2 / +2
Query: 794 DCDAQDSGCDGGQMENAFRFVIGNGGIDTEADYPFIGTDGTCDAS 660
D D GC GG M+NAF ++I GG+ TE+ YP+ GTDG+C S
Sbjct: 4430 DVYGDDEGCAGGLMDNAFEYMINRGGLTTESSYPYRGTDGSCRRS 4564
Score = 61.1 bits (127), Expect(8) = 1e-056
Identities = 27/57 (47%), Positives = 35/57 (61%)
Frame = -2 / +2
Query: 668 DASKEKNEKVATIDGLVEVASNNETALQEAVAIQPVSVAIDAGGRAFQHYSSGIFNG 498
D S ++ A+I G +V +NNE AL AVA QPVSVAI+ G F+ Y SG+ G
Sbjct: 4544 DGSCRRSASAASIRGYEDVPANNEAALMAAVAHQPVSVAINGGDSVFRFYDSGVLGG 4714
Score = 56.1 bits (116), Expect(8) = 1e-056
Identities = 18/30 (60%), Positives = 22/30 (73%)
Frame = -2 / +2
Query: 449 SESGKDYWIVKNSWSASWGEAGYIRMRRNV 360
+ G YWI+KNSW SWGE GY+R+RR V
Sbjct: 4769 ASDGTKYWIMKNSWGGSWGEGGYVRIRRGV 4858
Score = 38.6 bits (78), Expect(8) = 1e-056
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = -2 / +3
Query: 959 DLPDAIDWRQLGAVTEVKDQQQCG 888
D ++DWR +GAVT VKDQ CG
Sbjct: 3783 DAAGSMDWRAMGAVTGVKDQGSCG 3854
Score = 34.1 bits (68), Expect(8) = 1e-056
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = -2 / +2
Query: 494 CGTSLDHGVTAVGYGSES 441
CGT L+H +TA GYG+ S
Sbjct: 4721 CGTELNHAITAAGYGTAS 4774
Score = 27.6 bits (54), Expect(8) = 1e-056
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -1 / +1
Query: 363 RAPAHGQVRHRHGRVLPC 310
R P G++R R RVLPC
Sbjct: 4852 RCPRRGRLRPRPARVLPC 4905
Score = 25.8 bits (50), Expect(8) = 1e-056
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = -2 / +3
Query: 1091 TFRLGLTPFADLTLEEYRGRVLG 1023
T RL FADLT EE+R G
Sbjct: 3636 THRLATNRFADLTDEEFRAARTG 3704
>gb|BQ472689.1|BQ472689 HB01M15r BC Hordeum vulgare subsp. vulgare cDNA clone HB01M15
5-PRIME, mRNA sequence
Length = 682
Score = 199 bits (428), Expect(2) = 2e-056
Identities = 79/125 (63%), Positives = 96/125 (76%)
Frame = -2 / +2
Query: 653 KNEKVATIDGLVEVASNNETALQEAVAIQPVSVAIDAGGRAFQHYSSGIFNGPCGTSLDH 474
KN KV +IDG +V N+E +LQ+AVA PVSVAI+AGGR FQ Y SG+F+G CGT LDH
Sbjct: 80 KNAKVVSIDGFEDVPENDEKSLQKAVAHHPVSVAIEAGGREFQLYHSGVFSGRCGTQLDH 259
Query: 473 GVTAVGYGSESGKDYWIVKNSWSASWGEAGYIRMRRNVPRPTGKCGIAMDASYPVKDTYH 294
GV AVGYG+E+GKDYWIV+NSW +WGEAGY+RM RN+ +GKCGIAM +SYP K +
Sbjct: 260 GVVAVGYGTENGKDYWIVRNSWGPNWGEAGYLRMERNINVTSGKCGIAMMSSYPTKKGAN 439
Query: 293 DPGTA 279
P A
Sbjct: 440 PPKPA 454
Score = 106 bits (227), Expect(3) = 7e-033
Identities = 44/65 (67%), Positives = 48/65 (73%)
Frame = +1 / -2
Query: 460 TAVTPWSRLVPHGPLKMPEL*CWNARPPASMATLTGWIATASCSAVSLLLATSTNPSMVA 639
TA TPWS VPH PLK PE * WN+RPPASMATLTGW ATA CS S TS+ PSM+
Sbjct: 273 TATTPWSSCVPHLPLKTPEW*SWNSRPPASMATLTGW*ATAFCSDFSSFSGTSSKPSMLT 94
Query: 640 TFSFF 654
TF+FF
Sbjct: 93 TFAFF 79
Score = 43.2 bits (88), Expect(3) = 7e-033
Identities = 21/39 (53%), Positives = 23/39 (58%)
Frame = +1 / -2
Query: 313 G*DASMAMPHLPVGRGTLRLMRM*PASPQLALHEFFTIQ 429
G D MA+PH P+ LR MR PASPQ HE TIQ
Sbjct: 420 GYDDIMAIPHFPLVTLMLRSMRRYPASPQFGPHELRTIQ 304
Score = 41.8 bits (85), Expect(2) = 2e-056
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = -2 / +2
Query: 725 NGGIDTEADYPFIGTDGTCDASKEKNEKVA 636
NGGIDTE DYP+ DG CD ++ + V+
Sbjct: 11 NGGIDTEDDYPYKAVDGRCDVLRKNAKVVS 100
Score = 29.5 bits (58), Expect(3) = 7e-033
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +1 / -2
Query: 652 FSLLASQVPSVPMKG*SASVSIPP 723
F L S +PS + G*S+SVS+PP
Sbjct: 84 FFLRTSHLPSTAL*G*SSSVSMPP 13
>gb|BG365693.2|BG365693 HVSMEi0003M06f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0003M06f, mRNA sequence
Length = 744
Score = 104 bits (222), Expect(4) = 2e-055
Identities = 36/58 (62%), Positives = 49/58 (84%)
Frame = -2 / +2
Query: 959 DLPDAIDWRQLGAVTEVKDQQQCGGCWAFSAVAAIEGVNAIATGNLVSLSEQEIIDCD 786
+LP+++DWR+ GAV VKDQ CG CWAFSA+AA+EG+N I TG+++ LSEQE++DCD
Sbjct: 446 ELPESVDWRKKGAVGAVKDQGGCGSCWAFSAIAAVEGINQIVTGDMIPLSEQELVDCD 619
Score = 80.8 bits (170), Expect(4) = 2e-055
Identities = 33/43 (76%), Positives = 35/43 (81%)
Frame = -2 / +2
Query: 1151 FRDNLRYIDAHNAEADAGLHTFRLGLTPFADLTLEEYRGRVLG 1023
FRDNLRYID HNA ADAG+H+FRLGL FADLT EEYR LG
Sbjct: 254 FRDNLRYIDQHNAAADAGVHSFRLGLNRFADLTNEEYRSTYLG 382
Score = 59.3 bits (123), Expect(3) = 2e-026
Identities = 30/56 (53%), Positives = 32/56 (57%)
Frame = +1 / -1
Query: 787 SQSMISCSDSDTRLPVAIAFTPSMAATAENAQHPPHCCWSLTSVTAPSWRQSMASG 954
SQS SCSD PV I PS AA AE AQ P WSLT+ TAP + QS SG
Sbjct: 618 SQSTSSCSDRGIMSPVTIWLMPSTAAIAEKAQQLPQPPWSLTAPTAPFFLQSTDSG 451
Score = 55.1 bits (114), Expect(3) = 2e-026
Identities = 23/30 (76%), Positives = 26/30 (86%)
Frame = +1 / -1
Query: 1042 YSSRVRSAKGVRPRRKVWSPASASALCASM 1131
YSS VRSAK +RPRRK W+PASA+ALC SM
Sbjct: 363 YSSLVRSAKRLRPRRKEWTPASAAALCWSM 274
Score = 52.4 bits (108), Expect(4) = 2e-055
Identities = 19/35 (54%), Positives = 23/35 (65%)
Frame = -2 / +2
Query: 770 CDGGQMENAFRFVIGNGGIDTEADYPFIGTDGTCD 666
C+GG M+ AF F+I GGID E DYPF D C+
Sbjct: 638 CNGGLMDYAFEFIINKGGIDFEEDYPFKERDNRCE 742
Score = 43.7 bits (89), Expect(3) = 2e-026
Identities = 22/34 (64%), Positives = 25/34 (73%)
Frame = +1 / -1
Query: 664 ASQVPSVPMKG*SASVSIPPLPMTNRNAFSICPP 765
ASQ S+ +KG*S+S SIPPL M N NA SI PP
Sbjct: 744 ASQRLSLSLKG*SSSKSIPPLLMMNSNA*SIRPP 643
Score = 36.3 bits (73), Expect(4) = 2e-055
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = -2 / +2
Query: 1295 ERADEEVRRMYEAWKSKHG 1239
ER++EEVRRMY W ++HG
Sbjct: 152 ERSEEEVRRMYAEWMAEHG 208
>gb|BG343507.1|BG343507 HVSMEg0005P07f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0005P07f, mRNA sequence
Length = 938
Score = 113 bits (241), Expect(4) = 7e-055
Identities = 42/57 (73%), Positives = 50/57 (87%)
Frame = -2 / +3
Query: 959 DLPDAIDWRQLGAVTEVKDQQQCGGCWAFSAVAAIEGVNAIATGNLVSLSEQEIIDC 789
DLP ++DWR+ GAVTEVK+Q QCG CWAFS VAA+EG+NAI TGNL +LSEQE+IDC
Sbjct: 159 DLPKSVDWRKKGAVTEVKNQGQCGSCWAFSTVAAVEGINAIVTGNLTALSEQELIDC 329
Score = 76.7 bits (161), Expect(3) = 5e-024
Identities = 34/55 (61%), Positives = 36/55 (65%)
Frame = +1 / -2
Query: 790 QSMISCSDSDTRLPVAIAFTPSMAATAENAQHPPHCCWSLTSVTAPSWRQSMASG 954
QSM SCSDS RLPV +A PS AAT E AQ PHC W TSVTAP + QS G
Sbjct: 328 QSMSSCSDSAVRLPVTMALIPSTAATVEKAQQLPHCPWFFTSVTAPFFLQSTDLG 164
Score = 68.9 bits (144), Expect(4) = 7e-055
Identities = 25/64 (39%), Positives = 41/64 (64%)
Frame = -2 / +3
Query: 779 DSGCDGGQMENAFRFVIGNGGIDTEADYPFIGTDGTCDASKEKNEKVATIDGLVEVASNN 600
+SGC+GG M+ AF ++ +GG+ TE YP++ +G+C K+ + TI G +V +N+
Sbjct: 342 NSGCNGGLMDYAFSYIASSGGLHTEEAYPYLMEEGSCGDGKKAESEAVTISGYEDVPAND 521
Query: 599 ETAL 588
E AL
Sbjct: 522 EQAL 533
Score = 61.1 bits (127), Expect(4) = 7e-055
Identities = 23/34 (67%), Positives = 25/34 (73%)
Frame = -2 / +1
Query: 536 RAFQHYSSGIFNGPCGTSLDHGVTAVGYGSESGK 435
R FQ YS G F+G CG LDHGV AVGYGS+ GK
Sbjct: 526 RHFQFYSGGSFDGSCGAQLDHGVAAVGYGSDKGK 627
Score = 40.5 bits (82), Expect(3) = 5e-024
Identities = 26/63 (41%), Positives = 32/63 (50%)
Frame = +1 / -2
Query: 589 SAVSLLLATSTNPSMVATFSFFSLLASQVPSVPMKG*SASVSIPPLPMTNRNAFSICPPS 768
SA S L TS+ P +V L + Q+PS G ++SV PPL A SI PP
Sbjct: 532 SACSSLAGTSS*PLIVTASDSAFLPSPQLPSSMR*GYASSVCSPPLDAM*EKA*SIKPPL 353
Query: 769 QPL 777
QPL
Sbjct: 352 QPL 344
Score = 32.2 bits (64), Expect(3) = 5e-024
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +1 / -1
Query: 460 TAVTPWSRLVPHGPLKMPEL*CW 528
TA TP S PH P K+P L* W
Sbjct: 602 TAATP*SSCAPHDPSKLPPL*NW 534
Score = 28.6 bits (56), Expect(4) = 7e-055
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -2 / +3
Query: 1091 TFRLGLTPFADLTLEEYRGRVLG 1023
++ LGL FADLT +E++ LG
Sbjct: 24 SYWLGLNEFADLTHDEFKAAYLG 92
>gb|AV833271.1|AV833271 AV833271 K. Sato unpublished cDNA library: Hordeum vulgare subsp.
vulgare shoots germination Hordeum vulgare subsp.
vulgare cDNA clone bags4k12, mRNA sequence
Length = 531
Score = 166 bits (358), Expect(2) = 1e-054
Identities = 70/118 (59%), Positives = 79/118 (66%)
Frame = -2 / +2
Query: 641 VATIDGLVEVASNNETALQEAVAIQPVSVAIDAGGRAFQHYSSGIFNGPCGTSLDHGVTA 462
V TIDG EV S+ E L +AVA QP+SV I RAFQ YS GIF+GPC TSLDH V
Sbjct: 143 VVTIDGYKEVPSSKEDLLLQAVAQQPISVGICGSARAFQLYSQGIFDGPCPTSLDHAVLI 322
Query: 461 VGYGSESGKDYWIVKNSWSASWGEAGYIRMRRNVPRPTGKCGIAMDASYPVKDTYHDP 288
VGYGSE GKDYWIVKNSW WG GY+ M RN +G CGI M AS+P K + + P
Sbjct: 323 VGYGSEGGKDYWIVKNSWGERWGMKGYMHMHRNTGSSSGICGINMMASFPTKTSPNPP 496
Score = 68.0 bits (142), Expect(2) = 1e-054
Identities = 27/47 (57%), Positives = 33/47 (70%)
Frame = -2 / +2
Query: 779 DSGCDGGQMENAFRFVIGNGGIDTEADYPFIGTDGTCDASKEKNEKV 639
++GC GG M A++FVI NGGIDTE DYPF DGTC+ +K K V
Sbjct: 8 NTGCGGGLMTYAYKFVIKNGGIDTEDDYPFREADGTCNKNKLKKHVV 148
>gb|BJ470567.1|BJ470567 BJ470567 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal25c24 5', mRNA sequence
Length = 509
Score = 176 bits (379), Expect(2) = 1e-054
Identities = 68/101 (67%), Positives = 83/101 (82%)
Frame = -2 / +1
Query: 662 SKEKNEKVATIDGLVEVASNNETALQEAVAIQPVSVAIDAGGRAFQHYSSGIFNGPCGTS 483
+ +KN KV TIDG +V N+E +LQ+AVA QP+SVAI+AGGRAFQ Y SGIF G CGT+
Sbjct: 205 ANKKNAKVVTIDGYXDVPVNSEKSLQKAVANQPISVAIEAGGRAFQLYKSGIFTGTCGTA 384
Query: 482 LDHGVTAVGYGSESGKDYWIVKNSWSASWGEAGYIRMRRNV 360
LDHGV AVGYG+E+GKDYW+V+NSW + WGE GYIRM RN+
Sbjct: 385 LDHGVAAVGYGTENGKDYWLVRNSWGSVWGEDGYIRMERNI 507
Score = 100 bits (213), Expect(3) = 2e-031
Identities = 41/72 (56%), Positives = 49/72 (68%)
Frame = +1 / -1
Query: 460 TAVTPWSRLVPHGPLKMPEL*CWNARPPASMATLTGWIATASCSAVSLLLATSTNPSMVA 639
TA TPWS VP P+K+P+L* WNA PPAS+ATL GW ATA C SL TS PSMV
Sbjct: 407 TAATPWSSAVPQVPVKIPDL*SWNALPPASIATLMGWFATAFCRLFSLFTGTSXYPSMVT 228
Query: 640 TFSFFSLLASQV 675
T +FF L + ++
Sbjct: 227 TLAFFLLASQRL 192
Score = 57.9 bits (120), Expect(2) = 1e-054
Identities = 22/42 (52%), Positives = 29/42 (69%)
Frame = -2 / +1
Query: 764 GGQMENAFRFVIGNGGIDTEADYPFIGTDGTCDASKEKNEKV 639
GG M+ AF F+I NGGID+E DYP+ D CDA+K+ + V
Sbjct: 106 GGLMDYAFEFIINNGGIDSEEDYPYKERDNRCDANKKNAKVV 231
Score = 45.1 bits (92), Expect(3) = 2e-031
Identities = 24/38 (63%), Positives = 27/38 (71%)
Frame = +1 / -1
Query: 652 FSLLASQVPSVPMKG*SASVSIPPLPMTNRNAFSICPP 765
F LLASQ S+ + G*S+S SIPPL M N NA SI PP
Sbjct: 218 FFLLASQRLSLSL*G*SSSESIPPLLMMNSNA*SIRPP 105
Score = 29.0 bits (57), Expect(3) = 2e-031
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +1 / -1
Query: 364 LRLMRM*PASPQLALHEFFTIQ 429
LR +RM*P+SPQ EF T Q
Sbjct: 503 LRSIRM*PSSPQTLPQEFLTSQ 438
>gb|BQ472128.1|BQ472128 HV04H20r HV Hordeum vulgare subsp. vulgare cDNA clone HV04H20
5-PRIME, mRNA sequence
Length = 501
Score = 115 bits (245), Expect(3) = 1e-051
Identities = 43/62 (69%), Positives = 52/62 (83%)
Frame = -2 / +3
Query: 959 DLPDAIDWRQLGAVTEVKDQQQCGGCWAFSAVAAIEGVNAIATGNLVSLSEQEIIDCDAQ 780
DLP ++DWRQ GAVT VKDQ +CG CWAFS V ++EG+NAI TG+LVSLSEQE+IDCD
Sbjct: 15 DLPPSVDWRQKGAVTGVKDQGKCGSCWAFSTVVSVEGINAIRTGSLVSLSEQELIDCDTA 194
Query: 779 DS 774
D+
Sbjct: 195 DN 200
Score = 80.8 bits (170), Expect(3) = 1e-029
Identities = 37/60 (61%), Positives = 39/60 (65%)
Frame = +1 / -3
Query: 775 LSWASQSMISCSDSDTRLPVAIAFTPSMAATAENAQHPPHCCWSLTSVTAPSWRQSMASG 954
LS SQSM SCS+ DTRLPV +A PS T ENAQ PH WSLT VTAP RQS G
Sbjct: 199 LSAVSQSMSSCSERDTRLPVRMALMPSTDTTVENAQQLPHLPWSLTPVTAPFCRQSTDGG 20
Score = 69.3 bits (145), Expect(3) = 1e-051
Identities = 29/52 (55%), Positives = 36/52 (69%)
Frame = -2 / +3
Query: 641 VATIDGLVEVASNNETALQEAVAIQPVSVAIDAGGRAFQHYSSGIFNGPCGT 486
V IDG +V +N+E L AVA QPVSVA++A G+AF YS G+F G CGT
Sbjct: 342 VVHIDGHQDVPANSEEDLARAVANQPVSVAVEASGKAFMFYSEGVFTGECGT 497
Score = 58.3 bits (121), Expect(3) = 1e-051
Identities = 20/43 (46%), Positives = 29/43 (67%)
Frame = -2 / +3
Query: 785 AQDSGCDGGQMENAFRFVIGNGGIDTEADYPFIGTDGTCDASK 657
A + GC GG M+NAF ++ NGG+ TEA YP+ GTC+ ++
Sbjct: 192 ADNDGCQGGLMDNAFEYIKNNGGLITEAAYPYRAARGTCNVAR 320
Score = 54.7 bits (113), Expect(3) = 1e-029
Identities = 28/56 (50%), Positives = 31/56 (55%)
Frame = +1 / -3
Query: 487 VPHGPLKMPEL*CWNARPPASMATLTGWIATASCSAVSLLLATSTNPSMVATFSFF 654
VPH P+ P * NA P AS AT TGW ATA + SLL TS PS+ T F
Sbjct: 496 VPHSPVNTPSE*NMNAFPLASTATDTGWFATALARSSSLLAGTSWCPSICTTTGEF 329
Score = 33.1 bits (66), Expect(3) = 1e-029
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = +1 / -3
Query: 655 SLLASQVPSVPMKG*SASVSIPPLPMTNRNAFSICPPSQP 774
+L QVP G*+ASV PPL + A S+ PP P
Sbjct: 322 ALATLQVPLAARYG*AASVISPPLFLMYSKALSMSPPWHP 203
>gb|BJ470862.1|BJ470862 BJ470862 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal29e15 5', mRNA sequence
Length = 652
Score = 203 bits (437), Expect = 3e-051
Identities = 79/125 (63%), Positives = 98/125 (78%)
Frame = -2 / +2
Query: 662 SKEKNEKVATIDGLVEVASNNETALQEAVAIQPVSVAIDAGGRAFQHYSSGIFNGPCGTS 483
+ +KN KV TIDG +V N+E +LQ+AVA QP+SVAI+AGGRAFQ Y SGIF G CGT+
Sbjct: 56 ANKKNAKVVTIDGYEDVPVNSEKSLQKAVANQPISVAIEAGGRAFQLYKSGIFTGTCGTA 235
Query: 482 LDHGVTAVGYGSESGKDYWIVKNSWSASWGEAGYIRMRRNVPRPTGKCGIAMDASYPVKD 303
LDHGV AVGYG+E+GKDYW+V+NSW + WGE GYIRM RN+ +GKCGIA++ SYP K
Sbjct: 236 LDHGVAAVGYGTENGKDYWLVRNSWGSVWGEDGYIRMERNIKASSGKCGIAVEPSYPTKT 415
Query: 302 TYHDP 288
+ P
Sbjct: 416 GENPP 430
Score = 100 bits (214), Expect(2) = 3e-029
Identities = 41/72 (56%), Positives = 50/72 (69%)
Frame = +1 / -2
Query: 460 TAVTPWSRLVPHGPLKMPEL*CWNARPPASMATLTGWIATASCSAVSLLLATSTNPSMVA 639
TA TPWS VP P+K+P+L* WNA PPAS+ATL GW ATA C SL TS+ PSMV
Sbjct: 258 TAATPWSSAVPQVPVKIPDL*SWNALPPASIATLMGWFATAFCRLFSLFTGTSSYPSMVT 79
Query: 640 TFSFFSLLASQV 675
T +FF L + ++
Sbjct: 78 TLAFFLLASQRL 43
Score = 48.7 bits (100), Expect(2) = 3e-029
Identities = 22/41 (53%), Positives = 27/41 (65%)
Frame = +1 / -2
Query: 307 FTG*DASMAMPHLPVGRGTLRLMRM*PASPQLALHEFFTIQ 429
F G*+ S A+PHLP+ LR +RM*P+SPQ EF T Q
Sbjct: 411 FVG*EGSTAIPHLPLDALMLRSIRM*PSSPQTLPQEFLTSQ 289
>gb|BJ472733.1|BJ472733 BJ472733 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal36i06 5', mRNA sequence
Length = 562
Score = 203 bits (437), Expect = 3e-051
Identities = 79/125 (63%), Positives = 98/125 (78%)
Frame = -2 / +2
Query: 662 SKEKNEKVATIDGLVEVASNNETALQEAVAIQPVSVAIDAGGRAFQHYSSGIFNGPCGTS 483
+ +KN KV TIDG +V N+E +LQ+AVA QP+SVAI+AGGRAFQ Y SGIF G CGT+
Sbjct: 5 ANKKNAKVVTIDGYEDVPVNSEKSLQKAVANQPISVAIEAGGRAFQLYKSGIFTGTCGTA 184
Query: 482 LDHGVTAVGYGSESGKDYWIVKNSWSASWGEAGYIRMRRNVPRPTGKCGIAMDASYPVKD 303
LDHGV AVGYG+E+GKDYW+V+NSW + WGE GYIRM RN+ +GKCGIA++ SYP K
Sbjct: 185 LDHGVAAVGYGTENGKDYWLVRNSWGSVWGEDGYIRMERNIKASSGKCGIAVEPSYPTKT 364
Query: 302 TYHDP 288
+ P
Sbjct: 365 GENPP 379
Score = 100 bits (212), Expect(2) = 5e-029
Identities = 41/67 (61%), Positives = 47/67 (70%)
Frame = +1 / -2
Query: 460 TAVTPWSRLVPHGPLKMPEL*CWNARPPASMATLTGWIATASCSAVSLLLATSTNPSMVA 639
TA TPWS VP P+K+P+L* WNA PPAS+ATL GW ATA C SL TS+ PSMV
Sbjct: 207 TAATPWSSAVPQVPVKIPDL*SWNALPPASIATLMGWFATAFCRLFSLFTGTSSYPSMVT 28
Query: 640 TFSFFSL 660
T +FF L
Sbjct: 27 TLAFFLL 7
Score = 48.7 bits (100), Expect(2) = 5e-029
Identities = 22/41 (53%), Positives = 27/41 (65%)
Frame = +1 / -2
Query: 307 FTG*DASMAMPHLPVGRGTLRLMRM*PASPQLALHEFFTIQ 429
F G*+ S A+PHLP+ LR +RM*P+SPQ EF T Q
Sbjct: 360 FVG*EGSTAIPHLPLDALMLRSIRM*PSSPQTLPQEFLTSQ 238
>gb|BJ472765.1|BJ472765 BJ472765 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal36m07 5', mRNA sequence
Length = 538
Score = 203 bits (437), Expect = 3e-051
Identities = 79/125 (63%), Positives = 98/125 (78%)
Frame = -2 / +3
Query: 662 SKEKNEKVATIDGLVEVASNNETALQEAVAIQPVSVAIDAGGRAFQHYSSGIFNGPCGTS 483
+ +KN KV TIDG +V N+E +LQ+AVA QP+SVAI+AGGRAFQ Y SGIF G CGT+
Sbjct: 21 ANKKNAKVVTIDGYEDVPVNSEKSLQKAVANQPISVAIEAGGRAFQLYKSGIFTGTCGTA 200
Query: 482 LDHGVTAVGYGSESGKDYWIVKNSWSASWGEAGYIRMRRNVPRPTGKCGIAMDASYPVKD 303
LDHGV AVGYG+E+GKDYW+V+NSW + WGE GYIRM RN+ +GKCGIA++ SYP K
Sbjct: 201 LDHGVAAVGYGTENGKDYWLVRNSWGSVWGEDGYIRMERNIKASSGKCGIAVEPSYPTKT 380
Query: 302 TYHDP 288
+ P
Sbjct: 381 GENPP 395
Score = 100 bits (214), Expect(2) = 3e-029
Identities = 41/72 (56%), Positives = 50/72 (69%)
Frame = +1 / -1
Query: 460 TAVTPWSRLVPHGPLKMPEL*CWNARPPASMATLTGWIATASCSAVSLLLATSTNPSMVA 639
TA TPWS VP P+K+P+L* WNA PPAS+ATL GW ATA C SL TS+ PSMV
Sbjct: 223 TAATPWSSAVPQVPVKIPDL*SWNALPPASIATLMGWFATAFCRLFSLFTGTSSYPSMVT 44
Query: 640 TFSFFSLLASQV 675
T +FF L + ++
Sbjct: 43 TLAFFLLASQRL 8
Score = 48.7 bits (100), Expect(2) = 3e-029
Identities = 22/41 (53%), Positives = 27/41 (65%)
Frame = +1 / -1
Query: 307 FTG*DASMAMPHLPVGRGTLRLMRM*PASPQLALHEFFTIQ 429
F G*+ S A+PHLP+ LR +RM*P+SPQ EF T Q
Sbjct: 376 FVG*EGSTAIPHLPLDALMLRSIRM*PSSPQTLPQEFLTSQ 254
>gb|CA012821.1|CA012821 HT06I19r HT Hordeum vulgare subsp. vulgare cDNA clone HT06I19
5-PRIME, mRNA sequence
Length = 465
Score = 100 bits (213), Expect(2) = 2e-029
Identities = 41/61 (67%), Positives = 45/61 (73%)
Frame = +1 / -3
Query: 472 PWSRLVPHGPLKMPEL*CWNARPPASMATLTGWIATASCSAVSLLLATSTNPSMVATFSF 651
PWS VPH PLK PE * WN+RPPASMATLTGW ATA CS S TS+ PSM+ TF+F
Sbjct: 463 PWSSCVPHLPLKTPEW*SWNSRPPASMATLTGW*ATAFCSDFSSFSGTSSKPSMLTTFAF 284
Query: 652 F 654
F
Sbjct: 283 F 281
Score = 95.0 bits (201), Expect(3) = 5e-051
Identities = 39/61 (63%), Positives = 47/61 (77%)
Frame = -2 / +3
Query: 653 KNEKVATIDGLVEVASNNETALQEAVAIQPVSVAIDAGGRAFQHYSSGIFNGPCGTSLDH 474
KN KV +IDG +V N+E +LQ+AVA PVSVAI+AGGR FQ Y SG+F+G CGT LDH
Sbjct: 282 KNAKVVSIDGFEDVPENDEKSLQKAVAHHPVSVAIEAGGREFQLYHSGVFSGRCGTQLDH 461
Query: 473 G 471
G
Sbjct: 462 G 464
Score = 73.9 bits (155), Expect(3) = 5e-051
Identities = 27/53 (50%), Positives = 37/53 (69%)
Frame = -2 / +3
Query: 794 DCDAQDSGCDGGQMENAFRFVIGNGGIDTEADYPFIGTDGTCDASKEKNEKVA 636
D + Q SGC+GG M++AF F+I NGGIDTE DYP+ DG CD ++ + V+
Sbjct: 144 DINGQSSGCNGGLMDDAFEFIIKNGGIDTEDDYPYKAVDGRCDVLRKNAKVVS 302
Score = 72.1 bits (151), Expect(3) = 5e-051
Identities = 24/40 (60%), Positives = 33/40 (82%)
Frame = -2 / +3
Query: 905 DQQQCGGCWAFSAVAAIEGVNAIATGNLVSLSEQEIIDCD 786
+Q QCG CWAFSAV+ +E +N I TG +V+LSEQE+++CD
Sbjct: 27 EQGQCGSCWAFSAVSTVESINQIVTGEMVTLSEQELVECD 146
Score = 49.6 bits (102), Expect(2) = 2e-029
Identities = 27/56 (48%), Positives = 32/56 (57%)
Frame = +1 / -3
Query: 652 FSLLASQVPSVPMKG*SASVSIPPLPMTNRNAFSICPPSQPLSWASQSMISCSDSD 819
F L S +PS + G*S+SVS+PP M N A SI PP QPL S + S SD
Sbjct: 286 FFLRTSHLPSTAL*G*SSSVSMPPFFMMNSKASSIRPPLQPLLCPLMSHSTSSCSD 119
>gb|BF628689.3|BF628689 HVSMEb0007C07f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0007C07f, mRNA sequence
Length = 697
Score = 102 bits (217), Expect(4) = 1e-050
Identities = 39/85 (45%), Positives = 55/85 (64%)
Frame = -2 / +3
Query: 893 CGGCWAFSAVAAIEGVNAIATGNLVSLSEQEIIDCDAQDSGCDGGQMENAFRFVIGNGGI 714
CG CWAF VA IEG++ I G LVSLSEQ++IDCD D+GC GG + AF+++ NGGI
Sbjct: 3 CGSCWAFPTVATIEGIHKIKRGTLVSLSEQQLIDCDYLDNGCKGGLVTRAFQWIKKNGGI 182
Query: 713 DTEADYPFIGTDGTCDASKEKNEKV 639
+ + Y + G C +++ K+
Sbjct: 183 TSTSSYKYKAVRGRCLRNRKPAAKI 257
Score = 65.7 bits (137), Expect(3) = 3e-023
Identities = 30/60 (50%), Positives = 36/60 (60%)
Frame = +1 / -1
Query: 715 IPPLPMTNRNAFSICPPSQPLSWASQSMISCSDSDTRLPVAIAFTPSMAATAENAQHPPH 894
IPP + + A PP QPLS SQS+ CSD DTR+P+ I PS+ AT NAQ PH
Sbjct: 181 IPPFFLIHWKALVTRPPLQPLSR*SQSISCCSDRDTRVPLLILCIPSIVATVGNAQQDPH 2
Score = 65.7 bits (137), Expect(4) = 1e-050
Identities = 22/49 (44%), Positives = 30/49 (61%)
Frame = -2 / +3
Query: 455 YGSESGKDYWIVKNSWSASWGEAGYIRMRRNVPRPTGKCGIAMDASYPV 309
+ G YWIVKNSW +WG+ GYI M+R +G+CGIA +P+
Sbjct: 471 HAXAPGAKYWIVKNSWGTTWGDKGYILMKRGTKHSSGQCGIATPPVFPL 617
Score = 62.9 bits (131), Expect(4) = 1e-050
Identities = 26/52 (50%), Positives = 34/52 (65%)
Frame = -2 / +3
Query: 638 ATIDGLVEVASNNETALQEAVAIQPVSVAIDAGGRAFQHYSSGIFNGPCGTS 483
A I G +V SN+E +L AVA QPV+V+I + F HY GI+NGPC T+
Sbjct: 249 AKIVGFRKVKSNSEVSLMNAVANQPVAVSISSHSSHFHHYKGGIYNGPCSTT 404
Score = 51.0 bits (105), Expect(3) = 3e-023
Identities = 27/60 (45%), Positives = 32/60 (53%)
Frame = +1 / -1
Query: 460 TAVTPWSRLVPHGPLKMPEL*CWNARPPASMATLTGWIATASCSAVSLLLATSTNPSMVA 639
T +S +V HGPL +P L* W M T TGW ATA S SLLL T P++ A
Sbjct: 427 TVTAWFSLVVLHGPL*IPPL*WWK*LLCDEMETATGWFATAFISDTSLLLLTFLKPTIFA 248
Score = 30.4 bits (60), Expect(3) = 3e-023
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +1 / -1
Query: 379 M*PASPQLALHEFFTIQ 429
M*P SP + HEFFTIQ
Sbjct: 547 M*PLSPHVVPHEFFTIQ 497
Score = 26.7 bits (52), Expect(4) = 1e-050
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -2 / +3
Query: 488 TSLDHGVTAVGYGSE 444
T L+H VT VGYG +
Sbjct: 402 TKLNHAVTVVGYGQQ 446
>gb|AF134152.1|AF134152 Hordeum vulgare cysteine protease mRNA, partial cds
Length = 439
Score = 129 bits (276), Expect(3) = 1e-050
Identities = 54/74 (72%), Positives = 62/74 (83%)
Frame = -2 / +3
Query: 653 KNEKVATIDGLVEVASNNETALQEAVAIQPVSVAIDAGGRAFQHYSSGIFNGPCGTSLDH 474
KN KV TID +V N+ET+LQ+AVA QPVSVAI+AGGRAFQ YSSGIF G CGT+LDH
Sbjct: 216 KNAKVVTIDSYEDVTPNSETSLQKAVANQPVSVAIEAGGRAFQLYSSGIFTGKCGTALDH 395
Query: 473 GVTAVGYGSESGKD 432
GV AVGYG+E+GKD
Sbjct: 396 GVAAVGYGTENGKD 437
Score = 91.3 bits (193), Expect(3) = 5e-028
Identities = 40/65 (61%), Positives = 47/65 (72%)
Frame = +1 / -1
Query: 460 TAVTPWSRLVPHGPLKMPEL*CWNARPPASMATLTGWIATASCSAVSLLLATSTNPSMVA 639
TA TP S VPH P+K+P+ * WNA PPAS+ATLTGW ATA C VSL TS+ S+V
Sbjct: 409 TAATP*SSAVPHLPVKIPDE*SWNALPPASIATLTGWFATAFCRLVSLFGVTSS*LSIVT 230
Query: 640 TFSFF 654
TF+FF
Sbjct: 229 TFAFF 215
Score = 57.4 bits (119), Expect(3) = 1e-050
Identities = 21/40 (52%), Positives = 27/40 (67%)
Frame = -2 / +3
Query: 779 DSGCDGGQMENAFRFVIGNGGIDTEADYPFIGTDGTCDAS 660
+ GC+GG M+ AF F+I GGID E DYP+ G D CD +
Sbjct: 93 NEGCNGGLMDYAFDFIINYGGIDPEDDYPYKGKDERCDVN 212
Score = 52.8 bits (109), Expect(3) = 1e-050
Identities = 18/27 (66%), Positives = 25/27 (92%)
Frame = -2 / +3
Query: 866 VAAIEGVNAIATGNLVSLSEQEIIDCD 786
+AA+EG+N I TG+L+SLSEQE++DCD
Sbjct: 3 IAAVEGINQIVTGDLISLSEQELVDCD 83
Score = 36.8 bits (74), Expect(3) = 5e-028
Identities = 21/47 (44%), Positives = 25/47 (53%)
Frame = +1 / -1
Query: 634 VATFSFFSLLASQVPSVPMKG*SASVSIPPLPMTNRNAFSICPPSQP 774
+ T F S S+P+ G*S+S SIPP M NA SI PP P
Sbjct: 238 IVTTFAFFPFTSHRSSLPL*G*SSSGSIPP*LMMKSNA*SIRPPLHP 98
Score = 35.0 bits (70), Expect(3) = 5e-028
Identities = 16/26 (61%), Positives = 16/26 (61%)
Frame = +1 / -1
Query: 787 SQSMISCSDSDTRLPVAIAFTPSMAA 864
SQS SCSD D R PV I PS AA
Sbjct: 82 SQSTSSCSDKDIRSPVTIWLMPSTAA 5
>gb|BI953545.1|BI953545 HVSMEm0013C14f Hordeum vulgare green seedling EST library
HVcDNA0014 (Blumeria infected) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEm0013C14f, mRNA sequence
Length = 817
Score = 199 bits (429), Expect = 3e-050
Identities = 77/125 (61%), Positives = 97/125 (77%)
Frame = -2 / +3
Query: 662 SKEKNEKVATIDGLVEVASNNETALQEAVAIQPVSVAIDAGGRAFQHYSSGIFNGPCGTS 483
+ +KN KV TIDG +V N+E +LQ+AVA QP+SVAI+AGGRAFQ Y G+F G CGT+
Sbjct: 6 ANKKNAKVVTIDGYEDVPVNSEKSLQKAVANQPISVAIEAGGRAFQLYKWGVFTGTCGTA 185
Query: 482 LDHGVTAVGYGSESGKDYWIVKNSWSASWGEAGYIRMRRNVPRPTGKCGIAMDASYPVKD 303
LDHGV AVGYG+E+GKDYW+V+NSW + WGE GYIRM RN+ +GKCGIA++ SYP K
Sbjct: 186 LDHGVAAVGYGTENGKDYWLVRNSWGSVWGEDGYIRMERNIKASSGKCGIAVEPSYPTKT 365
Query: 302 TYHDP 288
+ P
Sbjct: 366 GENPP 380
Score = 95.9 bits (203), Expect(2) = 8e-028
Identities = 40/67 (59%), Positives = 44/67 (65%)
Frame = +1 / -1
Query: 460 TAVTPWSRLVPHGPLKMPEL*CWNARPPASMATLTGWIATASCSAVSLLLATSTNPSMVA 639
TA TPWS VP P+ P L* WNA PPAS+ATL GW ATA C SL TS+ PSMV
Sbjct: 208 TAATPWSSAVPQVPVNTPHL*SWNALPPASIATLMGWFATAFCRLFSLFTGTSSYPSMVT 29
Query: 640 TFSFFSL 660
T +FF L
Sbjct: 28 TLAFFLL 8
Score = 48.7 bits (100), Expect(2) = 8e-028
Identities = 22/41 (53%), Positives = 27/41 (65%)
Frame = +1 / -1
Query: 307 FTG*DASMAMPHLPVGRGTLRLMRM*PASPQLALHEFFTIQ 429
F G*+ S A+PHLP+ LR +RM*P+SPQ EF T Q
Sbjct: 361 FVG*EGSTAIPHLPLDALMLRSIRM*PSSPQTLPQEFLTSQ 239
>gb|BU983904.1|BU983904 HA31G11r HA Hordeum vulgare subsp. vulgare cDNA clone HA31G11
5-PRIME, mRNA sequence
Length = 451
Score = 199 bits (428), Expect = 4e-050
Identities = 79/125 (63%), Positives = 96/125 (76%)
Frame = -2 / +3
Query: 653 KNEKVATIDGLVEVASNNETALQEAVAIQPVSVAIDAGGRAFQHYSSGIFNGPCGTSLDH 474
KN KV +IDG +V N+E +LQ+AVA PVSVAI+AGGR FQ Y SG+F+G CGT LDH
Sbjct: 51 KNAKVVSIDGFEDVPENDEKSLQKAVAHHPVSVAIEAGGREFQLYHSGVFSGRCGTQLDH 230
Query: 473 GVTAVGYGSESGKDYWIVKNSWSASWGEAGYIRMRRNVPRPTGKCGIAMDASYPVKDTYH 294
GV AVGYG+E+GKDYWIV+NSW +WGEAGY+RM RN+ +GKCGIAM +SYP K +
Sbjct: 231 GVVAVGYGTENGKDYWIVRNSWGPNWGEAGYLRMERNINVTSGKCGIAMMSSYPTKKGAN 410
Query: 293 DPGTA 279
P A
Sbjct: 411 PPKPA 425
Score = 106 bits (227), Expect(2) = 2e-029
Identities = 44/65 (67%), Positives = 48/65 (73%)
Frame = +1 / -1
Query: 460 TAVTPWSRLVPHGPLKMPEL*CWNARPPASMATLTGWIATASCSAVSLLLATSTNPSMVA 639
TA TPWS VPH PLK PE * WN+RPPASMATLTGW ATA CS S TS+ PSM+
Sbjct: 244 TATTPWSSCVPHLPLKTPEW*SWNSRPPASMATLTGW*ATAFCSDFSSFSGTSSKPSMLT 65
Query: 640 TFSFF 654
TF+FF
Sbjct: 64 TFAFF 50
Score = 43.2 bits (88), Expect(2) = 2e-029
Identities = 21/39 (53%), Positives = 23/39 (58%)
Frame = +1 / -1
Query: 313 G*DASMAMPHLPVGRGTLRLMRM*PASPQLALHEFFTIQ 429
G D MA+PH P+ LR MR PASPQ HE TIQ
Sbjct: 391 GYDDIMAIPHFPLVTLMLRSMRRYPASPQFGPHELRTIQ 275
>gb|CA031300.1|CA031300 HX09I24r HX Hordeum vulgare subsp. vulgare cDNA clone HX09I24
5-PRIME, mRNA sequence
Length = 652
Score = 101 bits (216), Expect(3) = 2e-049
Identities = 35/58 (60%), Positives = 48/58 (82%)
Frame = -2 / +3
Query: 959 DLPDAIDWRQLGAVTEVKDQQQCGGCWAFSAVAAIEGVNAIATGNLVSLSEQEIIDCD 786
+LP+A+DWR+ GAV VK+Q QCG CWAFSAV+ +E +N I TG +V+LSEQE+++CD
Sbjct: 315 ELPEAVDWREKGAVAPVKNQGQCGSCWAFSAVSTVESINQIVTGEMVTLSEQELVECD 488
Score = 73.9 bits (155), Expect(3) = 2e-049
Identities = 27/53 (50%), Positives = 37/53 (69%)
Frame = -2 / +3
Query: 794 DCDAQDSGCDGGQMENAFRFVIGNGGIDTEADYPFIGTDGTCDASKEKNEKVA 636
D + Q SGC+GG M++AF F+I NGGIDTE DYP+ DG CD ++ + V+
Sbjct: 486 DINGQSSGCNGGLMDDAFEFIIKNGGIDTEDDYPYKAVDGRCDVLRKNAKVVS 644
Score = 60.2 bits (125), Expect(3) = 2e-049
Identities = 25/43 (58%), Positives = 30/43 (69%)
Frame = -2 / +3
Query: 1151 FRDNLRYIDAHNAEADAGLHTFRLGLTPFADLTLEEYRGRVLG 1023
F DNLR++DAHNA A AG FRL + FADLT +E+R LG
Sbjct: 114 FWDNLRFVDAHNARAAAGEEGFRLAMNRFADLTNDEFRAAYLG 242
>gb|BG415734.2|BG415734 HVSMEk0007K06f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0007K06f, mRNA sequence
Length = 669
Score = 80.8 bits (170), Expect(5) = 4e-049
Identities = 28/45 (62%), Positives = 37/45 (82%)
Frame = -2 / +1
Query: 908 KDQQQCGGCWAFSAVAAIEGVNAIATGNLVSLSEQEIIDCDAQDS 774
KDQ QCG CWAFS +AA+EG+NAI + NL SLSEQ+++DCD + +
Sbjct: 1 KDQGQCGSCWAFSTIAAVEGINAIRSKNLTSLSEQQLVDCDTKSN 135
Score = 63.8 bits (133), Expect(5) = 4e-049
Identities = 27/45 (60%), Positives = 32/45 (71%)
Frame = -2 / +3
Query: 587 QEAVAIQPVSVAIDAGGRAFQHYSSGIFNGPCGTSLDHGVTAVGY 453
++AVA Q V+VAI+A G FQ YS G+F G C T DHGV AVGY
Sbjct: 318 EDAVAAQXVAVAIEASGSHFQVYSEGVFAGKCRT*ADHGVAAVGY 452
Score = 62.5 bits (130), Expect(5) = 4e-049
Identities = 24/47 (51%), Positives = 29/47 (61%)
Frame = -2 / +1
Query: 440 GKDYWIVKNSWSASWGEAGYIRMRRNVPRPTGKCGIAMDASYPVKDT 300
G YWIVKNSW WGE G RM+ +V GI M+A YPVK++
Sbjct: 469 GTQYWIVKNSWGPEWGEKGSXRMKPDVKEQEXLFGIRMEAFYPVKNS 609
Score = 53.3 bits (110), Expect(4) = 7e-022
Identities = 24/49 (48%), Positives = 25/49 (51%)
Frame = +1 / -2
Query: 760 PPSQPLSWASQSMISCSDSDTRLPVAIAFTPSMAATAENAQHPPHCCWS 906
P L + SQS CSD D R IA PS AA E AQ PHC WS
Sbjct: 149 PLQPALDFVSQSTSCCSDRDVRFLERIALMPSTAAIVEKAQQLPHCPWS 3
Score = 42.3 bits (86), Expect(4) = 7e-022
Identities = 22/42 (52%), Positives = 22/42 (52%)
Frame = +1 / -3
Query: 460 TAVTPWSRLVPHGPLKMPEL*CWNARPPASMATLTGWIATAS 585
TA TPWS V H P P * P ASMAT T ATAS
Sbjct: 445 TAATPWSAXVRHLPANTPSE*T*KCDPLASMATATXCAATAS 320
Score = 40.0 bits (81), Expect(4) = 7e-022
Identities = 21/40 (52%), Positives = 23/40 (57%)
Frame = +1 / -2
Query: 310 TG*DASMAMPHLPVGRGTLRLMRM*PASPQLALHEFFTIQ 429
TG*+ASM +P T MRM P SP HEFFTIQ
Sbjct: 599 TG*NASMRIPKSXSCSFTSGFMRMDPFSPHSGPHEFFTIQ 480
Score = 39.1 bits (79), Expect(5) = 4e-049
Identities = 12/30 (40%), Positives = 22/30 (73%)
Frame = -2 / +1
Query: 779 DSGCDGGQMENAFRFVIGNGGIDTEADYPF 690
++GC+GG M+ AF+++ +GG+ E YP+
Sbjct: 133 NAGCNGGLMDYAFQYIAKHGGVAAEDAYPY 222
Score = 24.0 bits (46), Expect(5) = 4e-049
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = -2 / +1
Query: 656 EKNEKVATIDGLVEVASNNETALQ 585
+K V TID +V +N++TAL+
Sbjct: 250 KKPSAVVTIDWYEDVPANDDTALK 321
Score = 23.5 bits (45), Expect(4) = 7e-022
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = +1 / -2
Query: 589 SAVSLLLATSTNPSMVATFSFFSL 660
SAVS L TS+ SMV T F L
Sbjct: 317 SAVSSLAGTSSYQSMVTTADGFLL 246
>gb|BI952590.1|BI952590 HVSMEm0007B06f Hordeum vulgare green seedling EST library
HVcDNA0014 (Blumeria infected) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEm0007B06f, mRNA sequence
Length = 869
Score = 100 bits (214), Expect(3) = 4e-049
Identities = 38/65 (58%), Positives = 51/65 (78%)
Frame = -2 / +1
Query: 638 ATIDGLVEVASNNETALQEAVAIQPVSVAIDAGGRAFQHYSSGIFNGPCGTSLDHGVTAV 459
A+I G VA+ +E +L AVA+QPV+V+I+AGG FQHY +G++NGPCGT L+HGVT V
Sbjct: 211 ASISGFQRVATRSELSLTNAVAMQPVAVSIEAGGANFQHYRNGVYNGPCGTRLNHGVTVV 390
Query: 458 GYGSE 444
GYG +
Sbjct: 391 GYGKD 405
Score = 83.1 bits (175), Expect(3) = 4e-049
Identities = 30/59 (50%), Positives = 40/59 (67%)
Frame = -2 / +1
Query: 833 TGNLVSLSEQEIIDCDAQDSGCDGGQMENAFRFVIGNGGIDTEADYPFIGTDGTCDASK 657
TG L SLSEQE++DCD D GC+GG A +++ NGGI ++ DYP+ D TCD +K
Sbjct: 19 TGKLASLSEQELVDCDKLDHGCNGGVSYRALQWITSNGGITSQDDYPYTAEDDTCDTTK 195
Score = 74.8 bits (157), Expect(4) = 2e-026
Identities = 33/62 (53%), Positives = 38/62 (61%)
Frame = +1 / -1
Query: 460 TAVTPWSRLVPHGPLKMPEL*CWNARPPASMATLTGWIATASCSAVSLLLATSTNPSMVA 639
T VTPW VPHGPL P *CW PPAS+ T TG +ATA + SLL+AT P M A
Sbjct: 389 TTVTPWFSRVPHGPLYTPFR*CWKLAPPASIDTATGCMATAFVNDSSLLVATRWKPEMEA 210
Query: 640 TF 645
+
Sbjct: 209 AW 204
Score = 50.6 bits (104), Expect(3) = 4e-049
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = -2 / +1
Query: 470 VTAVGYGSESGKDYWIVKNSWSASWGEAGYIRMRRNV 360
V G + + YWIVKNSW WG+ GY+RM++ +
Sbjct: 385 VVGYGKDEVTRESYWIVKNSWGEKWGDNGYLRMKKGI 495
Score = 49.6 bits (102), Expect(4) = 2e-026
Identities = 26/60 (43%), Positives = 36/60 (60%)
Frame = +1 / -1
Query: 655 SLLASQVPSVPMKG*SASVSIPPLPMTNRNAFSICPPSQPLSWASQSMISCSDSDTRLPV 834
S + SQV S + G*S+ +PPL + + +A + PP QP S SQS SCS+S+ PV
Sbjct: 197 SFVVSQVSSSAVYG*SS*EVMPPLEVIHCSAR*LTPPLQPWSNLSQSTSSCSESEASFPV 18
Score = 27.6 bits (54), Expect(4) = 2e-026
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +1 / -1
Query: 385 PASPQLALHEFFTIQ 429
P SP + HEFFTIQ
Sbjct: 470 PLSPHFSPHEFFTIQ 426
Score = 22.6 bits (43), Expect(4) = 2e-026
Identities = 9/20 (45%), Positives = 10/20 (50%)
Frame = +2 / -2
Query: 314 GRTRPWRCRTCPWAGARCAS 373
G+ WRCR P A C S
Sbjct: 544 GKMPGWRCRRSPRACL*CPS 485
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 480,975,462
Number of Sequences: 312970
Number of extensions: 6883657
Number of successful extensions: 92346
Number of sequences better than 1.0e-020: 346
length of database: 58,378,179
effective HSP length: 53
effective length of database: 41,790,769
effective search space used: 18178984515
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)