TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3829517.2.1
(913 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BE214454.2|BE214454 HV_CEb0003I03f Hordeum vulgare seedl... 303 e-117
gb|BE558888.2|BE558888 HV_CEb0020K23f Hordeum vulgare seedl... 303 e-112
gb|BE558314.3|BE558314 HV_CEb0017D03f Hordeum vulgare seedl... 301 e-105
gb|BF624084.3|BF624084 HVSMEa0009E20f Hordeum vulgare seedl... 303 e-104
gb|AL504653.1|AL504653 AL504653 Hordeum vulgare Barke roots... 301 e-100
gb|BQ466319.1|BQ466319 HT02D06r HT Hordeum vulgare subsp. v... 301 4e-096
gb|BU984621.1|BU984621 HF04H12r HF Hordeum vulgare subsp. v... 234 4e-096
gb|BU985985.1|BU985985 HF09E04r HF Hordeum vulgare subsp. v... 234 4e-096
gb|AL503798.1|AL503798 AL503798 Hordeum vulgare Barke roots... 301 3e-095
gb|CA015021.1|CA015021 HT13A16r HT Hordeum vulgare subsp. v... 301 1e-092
gb|CA018640.1|CA018640 HV09D16r HV Hordeum vulgare subsp. v... 214 7e-091
gb|BE215769.2|BE215769 HV_CEb0008H02f Hordeum vulgare seedl... 303 4e-089
gb|BJ549486.1|BJ549486 BJ549486 K. Sato unpublished cDNA li... 206 1e-088
gb|BM370565.2|BM370565 EBro08_SQ004_J19_R root, 3 week, dro... 193 1e-084
gb|BU988530.1|BU988530 HF17O12r HF Hordeum vulgare subsp. v... 216 5e-084
gb|BU989028.1|BU989028 HF19I13r HF Hordeum vulgare subsp. v... 214 2e-083
gb|BJ544512.1|BJ544512 BJ544512 K. Sato unpublished cDNA li... 216 4e-082
gb|BF253552.2|BF253552 HVSMEf0001D24f Hordeum vulgare seedl... 299 2e-080
gb|BF255119.2|BF255119 HVSMEf0006A03f Hordeum vulgare seedl... 279 2e-080
gb|BJ545973.1|BJ545973 BJ545973 K. Sato unpublished cDNA li... 172 2e-078
gb|CA002182.1|CA002182 HS06M06r HS Hordeum vulgare subsp. v... 289 1e-077
gb|BJ550139.1|BJ550139 BJ550139 K. Sato unpublished cDNA li... 168 4e-077
gb|BI947528.1|BI947528 HVSMEl0005M13f Hordeum vulgare spike... 276 9e-074
gb|CA009432.1|CA009432 HU14B18r HU Hordeum vulgare subsp. v... 265 2e-070
gb|CA014931.1|CA014931 HT12M06r HT Hordeum vulgare subsp. v... 131 3e-070
gb|CA003108.1|CA003108 HS09G23r HS Hordeum vulgare subsp. v... 264 7e-070
gb|BJ547046.1|BJ547046 BJ547046 K. Sato unpublished cDNA li... 131 2e-067
gb|BE455419.2|BE455419 HVSMEg0017A13f Hordeum vulgare pre-a... 140 2e-066
gb|CA032242.1|CA032242 HX12H05r HX Hordeum vulgare subsp. v... 131 1e-059
gb|AV912761.1|AV912761 AV912761 K. Sato unpublished cDNA li... 136 7e-059
gb|BQ764866.1|BQ764866 EBca01_SQ005_J02_R carpel, pre-anthe... 136 6e-058
gb|CA016359.1|CA016359 HV09D16u HV Hordeum vulgare subsp. v... 140 8e-058
gb|BG415780.1|BG415780 HVSMEk0007M14f Hordeum vulgare testa... 130 8e-058
gb|BE601932.2|BE601932 HVSMEh0100D18f Hordeum vulgare 5-45 ... 128 2e-057
gb|BQ658168.1|BQ658168 HA05H06u HA Hordeum vulgare subsp. v... 140 3e-057
gb|BG368555.1|BG368555 HVSMEi0019L09f Hordeum vulgare 20 DA... 131 2e-056
gb|AJ462436.1|AJ462436 AJ462436 S00002 Hordeum vulgare subs... 122 2e-055
gb|BF254477.2|BF254477 HVSMEf0004C05f Hordeum vulgare seedl... 128 2e-055
gb|BU967702.1|BU967702 HB05C06r BC Hordeum vulgare subsp. v... 136 6e-055
gb|AV917187.1|AV917187 AV917187 K. Sato unpublished cDNA li... 136 6e-055
gb|CA003015.1|CA003015 HS09C16r HS Hordeum vulgare subsp. v... 213 1e-054
gb|AJ462435.1|AJ462435 AJ462435 S00002 Hordeum vulgare subs... 136 7e-054
gb|CA029926.1|CA029926 HX05J14r HX Hordeum vulgare subsp. v... 119 4e-053
gb|AV917494.1|AV917494 AV917494 K. Sato unpublished cDNA li... 119 5e-053
gb|BF258825.2|BF258825 HVSMEf0016M11f Hordeum vulgare seedl... 131 2e-052
gb|BQ753274.1|BQ753274 EBan01_SQ001_B08_R anther, yellow st... 131 4e-052
gb|BG418273.2|BG418273 HVSMEk0022C14f Hordeum vulgare testa... 131 3e-051
gb|BJ547013.1|BJ547013 BJ547013 K. Sato unpublished cDNA li... 131 1e-050
gb|BQ471154.1|BQ471154 HV01D22T HV Hordeum vulgare subsp. v... 131 1e-049
gb|BM928838.1|BM928838 LP10014 Lemma/palea-enriched cDNA li... 138 8e-048
gb|BG415240.2|BG415240 HVSMEk0005K22f Hordeum vulgare testa... 105 6e-047
gb|AL501950.1|AL501950 AL501950 Hordeum vulgare Barke roots... 140 1e-045
gb|BJ544996.1|BJ544996 BJ544996 K. Sato unpublished cDNA li... 173 6e-045
gb|CA028826.1|CA028826 HZ63F21r HZ Hordeum vulgare subsp. v... 178 3e-044
gb|CB877143.1|CB877143 HP03L10T HP Hordeum vulgare subsp. v... 107 3e-043
gb|BI949597.1|BI949597 HVSMEl0014N07f Hordeum vulgare spike... 114 5e-042
gb|BJ457337.1|BJ457337 BJ457337 K. Sato unpublished cDNA li... 114 8e-042
gb|BU990367.1|BU990367 HF24N04r HF Hordeum vulgare subsp. v... 140 1e-041
gb|BF629992.2|BF629992 HVSMEb0007J09f Hordeum vulgare seedl... 123 2e-041
gb|BQ460707.1|BQ460707 HA06C19r HA Hordeum vulgare subsp. v... 136 1e-040
gb|BJ449919.1|BJ449919 BJ449919 K. Sato unpublished cDNA li... 144 5e-040
gb|BJ548886.1|BJ548886 BJ548886 K. Sato unpublished cDNA li... 108 7e-040
gb|CB876693.1|CB876693 HP02B09T HP Hordeum vulgare subsp. v... 107 1e-039
gb|AV919932.1|AV919932 AV919932 K. Sato unpublished cDNA li... 109 4e-039
gb|BJ548849.1|BJ548849 BJ548849 K. Sato unpublished cDNA li... 108 2e-038
gb|CB879402.1|CB879402 HP02B09w HP Hordeum vulgare subsp. v... 107 5e-038
gb|BE214923.1|BE214923 HV_CEb0005D01f Hordeum vulgare seedl... 109 4e-037
gb|BQ464950.1|BQ464950 HU02D17r HU Hordeum vulgare subsp. v... 107 5e-037
gb|CB879794.1|CB879794 HP03L10w HP Hordeum vulgare subsp. v... 107 7e-037
gb|BI952427.1|BI952427 HVSMEm0006F23f Hordeum vulgare green... 107 4e-035
gb|CB874547.1|CB874547 HX05J14w HX Hordeum vulgare subsp. v... 109 2e-034
gb|BQ754649.1|BQ754649 EBed01_SQ003_G16_R endosperm, 6 DPA,... 140 9e-033
gb|CA000846.1|CA000846 HS06M06u HS Hordeum vulgare subsp. v... 140 9e-033
gb|CA028801.1|CA028801 HZ63E17r HZ Hordeum vulgare subsp. v... 117 6e-026
gb|BF256997.2|BF256997 HVSMEf0011J07f Hordeum vulgare seedl... 115 3e-025
gb|BU987456.1|BU987456 HF14M22r HF Hordeum vulgare subsp. v... 107 9e-025
gb|CA027795.1|CA027795 HZ60A22r HZ Hordeum vulgare subsp. v... 68 9e-025
gb|CA026561.1|CA026561 HZ56E07r HZ Hordeum vulgare subsp. v... 107 1e-024
gb|AL501218.1|AL501218 AL501218 Hordeum vulgare Barke roots... 80 6e-024
gb|BQ657997.1|BQ657997 HA06C19u HA Hordeum vulgare subsp. v... 109 3e-023
gb|CA009782.1|CA009782 HT12M06u HT Hordeum vulgare subsp. v... 107 1e-022
>gb|BE214454.2|BE214454 HV_CEb0003I03f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0003I03f, mRNA sequence
Length = 711
Score = 303 bits (656), Expect(2) = e-117
Identities = 124/154 (80%), Positives = 138/154 (89%)
Frame = +1 / +3
Query: 1 MAEVEATVGRLMLYSYWRSSCSHRARIALNLKGVDYEYKAVNLLKGEQSDPEFVKLNPMK 180
MA EA R +LYSYWRSSCSHR RIALNLKG+DYEYKAVNLLKGEQSDPEF+KLNPMK
Sbjct: 15 MASAEAPAARPILYSYWRSSCSHRVRIALNLKGIDYEYKAVNLLKGEQSDPEFMKLNPMK 194
Query: 181 FVPALVDGSSVIGDSYAITLYLEDKYPEPPLLPQDLQKKALNHQIASIVASGIQPLHNLT 360
FVPA VDG +VIGDSYAI LYLEDKYP+ PLLPQDL+KKALN QIASIV SGIQPLHNLT
Sbjct: 195 FVPAWVDGDAVIGDSYAIALYLEDKYPQRPLLPQDLEKKALNIQIASIVCSGIQPLHNLT 374
Query: 361 VLRFIDQKVGAGESVLWTQQQIERGFTAIENLIQ 462
++RFI+QKVG GES+ W QQQI+RGFTA+EN+I+
Sbjct: 375 LVRFIEQKVGTGESLPWVQQQIDRGFTAVENMIK 476
Score = 230 bits (497), Expect(2) = 3e-089
Identities = 108/152 (71%), Positives = 110/152 (72%)
Frame = -3 / -3
Query: 458 IRFSIAVKPLSICC*VHNTLSPAPTFWSMNLNTVRLWRG*IPEATMLAIW*FKAFFXXXX 279
I FS AVKPLSICC H LSP PTF SMNL VRL RG*IPE TMLAIW F+AFF
Sbjct: 472 IMFSTAVKPLSICCWTHGRLSPVPTFCSMNLTKVRL*RG*IPEHTMLAIWIFRAFFSRSW 293
Query: 278 XXXXXXGYLSSKYSVIA*ESPITELPSTNAGTNFIGLSLTNSGSDCSPLRRFTALYS*ST 99
GYLSSKY+ IA*ESPIT PST AGTNFIGLS NSGSDCSPLRR TALYS*S
Sbjct: 292 GKRGR*GYLSSKYNAIA*ESPITASPSTQAGTNFIGLSFMNSGSDCSPLRRLTALYS*SM 113
Query: 98 PLRLRAMRARWEHELRQYEYSISRPTVASTSA 3
PLRL AMR RWE ELRQYE I R AS A
Sbjct: 112 PLRLSAMRTRWEQELRQYE*RIGRAAGASAEA 17
Score = 176 bits (378), Expect(2) = 9e-059
Identities = 81/151 (53%), Positives = 100/151 (66%)
Frame = -2 / -2
Query: 453 VLNSCETSLDLLLSPQHTLPCTNLLVNEPQHCEVMERLNTRSYNACNLVIQSFXXXXXXX 274
VLNSCETS++LLL P+ LPC++LL+NE E+++RLNTR++NAC L IQ
Sbjct: 467 VLNSCETSINLLLDPREALPCSDLLLNESHQGEIVKRLNTRTHNACYLDIQGLLFKVLGQ 288
Query: 273 XXXXXXXXLQIQCYRVRVTYYRTAINQRRDELHRIKLDEFWIRLLALEKVHRLVLVIHTF 94
LQIQCY V V Y ++ RDELHRIKL E IRLLALE+V RLVL+I F
Sbjct: 287 KRALRVLVLQIQCYCVGVADYCVPVDPGRDELHRIKLHELGIRLLALEEVDRLVLIIDAF 108
Query: 93 EIESDAGTVGARAAPVRVQHQSPHRRLHLRH 1
E+E DA VGA AAPVRV+++ RRL H
Sbjct: 107 EVERDADAVGAGAAPVRVENRPRRRRLRRSH 15
Score = 167 bits (360), Expect(2) = 1e-058
Identities = 82/144 (56%), Positives = 92/144 (63%)
Frame = +3 / +2
Query: 27 ATDXXXXXXXXXXPPCPHRSQSQRCGLRVQGGEPSQGRAV*SRIRQA*SYEVRPCVG*WQ 206
A D PP PHR+Q QR L VQGG+P QGRAV*SR+ +A*SYEVRPC+G
Sbjct: 41 AADSLLVLAQLLLPPRPHRAQPQRHRL*VQGGQPPQGRAV*SRVHEA*SYEVRPCLGRRG 220
Query: 207 FCNR*LLRDNTVFGGQVPRASSSTSRPSKESFESPDCKHCSFWYSTSP*PHSVEVH*PEG 386
NR LLR++ VFGGQVP A S RP KE E PD KHC FWYSTS H E+H* +G
Sbjct: 221 RSNRRLLRNSIVFGGQVPSAPSFAPRP*KEGPEYPDSKHCVFWYSTSSQSHLGEIH*AKG 400
Query: 387 WCRGECVVDSTTNRERFHSY*EPD 458
RGE V TT+ RFHS *E D
Sbjct: 401 RNRGEPPVGPTTD**RFHSC*EHD 472
Score = 142 bits (305), Expect(2) = 2e-048
Identities = 77/131 (58%), Positives = 84/131 (64%)
Frame = -1 / -1
Query: 457 SGSQ*L*NLSRFVVESTTHSPLHQPSGQ*TSTL*GYGEVEYQKLQCLQSGDSKLSFEGLE 278
S SQ L*NL + VV T SPL +P Q* S * EVEYQ QCL SG S SF+GL
Sbjct: 471 SCSQQL*NLYQSVVGPTGGSPLFRPFAQ*ISPR*DCEEVEYQNTQCLLSGYSGPSFQGLG 292
Query: 277 VEEEALGTCPPNTVLSRKSHLLQNCHQPTQGRTS*D*A*RILDQTARP*EGSPPCTRNPH 98
+E A GTCPPNT+L R+S L +P QGRTS*D*A DQTARP* G PPCT N
Sbjct: 291 AKEGAEGTCPPNTMLLRRSRRLLRPRRPRQGRTS*D*AS*TRDQTARP*GG*PPCTHNRC 112
Query: 97 L*D*ERCGHGG 65
L* * RCG GG
Sbjct: 111 L*G*ARCGRGG 79
Score = 140 bits (301), Expect(2) = e-117
Identities = 56/71 (78%), Positives = 65/71 (91%)
Frame = +1 / +3
Query: 463 LKGCAGKYATGDEVQLADVFLAPQIYAAIERTKIDMSNYPTLARLHSEYMSHPAFEAALP 642
+KGCAGK+A GDEVQLADVFLAPQI+AA+ R +IDMS YPTLARLH +YM+HPAFEAALP
Sbjct: 471 IKGCAGKFAMGDEVQLADVFLAPQIFAAVTRFQIDMSKYPTLARLHDQYMTHPAFEAALP 650
Query: 643 GKQPDAPSSS* 675
+QPDAPSS+*
Sbjct: 651 DRQPDAPSSA* 683
Score = 118 bits (253), Expect(2) = 3e-089
Identities = 51/67 (76%), Positives = 54/67 (80%)
Frame = -3 / -3
Query: 668 DEGASGCLPGSAASNAGCDMYSEWSLARVG*FDMSILVRSMAA*IWGARNTSASWTSSPV 489
+EGASGC GSAASNAGC +Y WSLARVG FDMSI R AA IWGARNTSASWTSSP+
Sbjct: 676 EEGASGCRSGSAASNAGCVIY*SWSLARVGYFDMSI*KRVTAAKIWGARNTSASWTSSPI 497
Query: 488 AYFPAHP 468
A FPA P
Sbjct: 496 ANFPAQP 476
Score = 79.4 bits (167), Expect(2) = 1e-058
Identities = 37/74 (50%), Positives = 45/74 (60%)
Frame = +3 / +2
Query: 465 KRMRREVCNRR*SPTGRCIPCTPDLCSH*TH*N*HVKLPHSC*APLGVHVTPCV*SSAPW 644
+R+ EVC R*SPTGR IPCTPD C + N HV++ H AP V+ TPC+*S AP
Sbjct: 473 QRLCWEVCYGR*SPTGRRIPCTPDFCCSDSFSNRHVEISHPREAPRSVYDTPCI*SCAP* 652
Query: 645 QATGRPFILLGTAP 686
A PF+ L P
Sbjct: 653 PAARCPFLCLDIGP 694
Score = 73.9 bits (155), Expect(4) = 8e-032
Identities = 35/67 (52%), Positives = 40/67 (59%)
Frame = +2 / +1
Query: 479 GSMQQEMKSNWQMYSLHPRSMQPLNALKLTCQTTPLLLGSTRSTCHTLRLKQRSLASNRT 658
GS+ EMKSNWQ YSLHPR + K TC+ P GST S HTL LK RSL +
Sbjct: 487 GSLLWEMKSNWQTYSLHPRFLLQ*LVFKSTCRNIPPSRGSTISI*HTLHLKLRSLTGSPM 666
Query: 659 PLHPPRN 679
PL PR+
Sbjct: 667 PLPLPRH 687
Score = 71.6 bits (150), Expect(2) = 9e-059
Identities = 36/73 (49%), Positives = 43/73 (58%)
Frame = -1 / -1
Query: 685 GAVPRRMKGRPVACQGALLQTQGVTCTPSGA*QEWGSLTCQF*CVQWLHRSGVQGIHLPV 506
G + R+ KG A QGA LQ QGV+ T GA + W TC+F +SGVQGI LPV
Sbjct: 693 GPMSRQRKGHRAAGQGAQLQMQGVSYTDRGASRGWDISTCRFENESLQQKSGVQGIRLPV 514
Query: 505 GLHLLLHTSRRIL 467
GLHL TS+ L
Sbjct: 513 GLHLP*QTSQHSL 475
Score = 70.7 bits (148), Expect(2) = 2e-048
Identities = 30/58 (51%), Positives = 38/58 (65%)
Frame = -2 / -2
Query: 639 ERCFKRRV*HVLRVEPSKSGVV*HVNFSAFNGCIDLGCKEYICQLDFISCCILPGASF 466
ER FK RV H+L VEP + G+ HV+ + +LGCKEY+CQLDFIS LP +F
Sbjct: 647 ERSFKCRVCHILIVEPREGGIFRHVDLKTSHCSKNLGCKEYVCQLDFISHSKLPSTAF 474
Score = 44.6 bits (91), Expect(4) = 8e-032
Identities = 24/41 (58%), Positives = 27/41 (65%)
Frame = +2 / +1
Query: 335 VFNLSITSQC*GSLTRRLVQGRVCCGLNNKSREVSQLLRT* 457
VFNL S * SL++R QGR G NN+ EVSQLLRT*
Sbjct: 349 VFNLFTISPW*DSLSKRSEQGRASRGSNNRLIEVSQLLRT* 471
Score = 43.2 bits (88), Expect(4) = 8e-032
Identities = 18/26 (69%), Positives = 20/26 (76%)
Frame = +2 / +1
Query: 221 TLTR*HCIWRTSTQSLLFYLKTFKRK 298
T T+*HCIWRTST S LF KT KR+
Sbjct: 235 TPTQ*HCIWRTSTLSALFCPKTLKRR 312
Score = 30.9 bits (61), Expect(4) = 8e-032
Identities = 15/22 (68%), Positives = 15/22 (68%)
Frame = +2 / +1
Query: 41 TRTGAARAPTVPASLSISKVWI 106
TRTGAA APT AS S SK I
Sbjct: 55 TRTGAAPAPTASASRSTSKASI 120
>gb|BE558888.2|BE558888 HV_CEb0020K23f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0020K23f, mRNA sequence
Length = 813
Score = 303 bits (656), Expect(3) = e-112
Identities = 124/154 (80%), Positives = 138/154 (89%)
Frame = +1 / +1
Query: 1 MAEVEATVGRLMLYSYWRSSCSHRARIALNLKGVDYEYKAVNLLKGEQSDPEFVKLNPMK 180
MA EA R +LYSYWRSSCSHR RIALNLKG+DYEYKAVNLLKGEQSDPEF+KLNPMK
Sbjct: 49 MASAEAPAARPILYSYWRSSCSHRVRIALNLKGIDYEYKAVNLLKGEQSDPEFMKLNPMK 228
Query: 181 FVPALVDGSSVIGDSYAITLYLEDKYPEPPLLPQDLQKKALNHQIASIVASGIQPLHNLT 360
FVPA VDG +VIGDSYAI LYLEDKYP+ PLLPQDL+KKALN QIASIV SGIQPLHNLT
Sbjct: 229 FVPAWVDGDAVIGDSYAIALYLEDKYPQRPLLPQDLEKKALNIQIASIVCSGIQPLHNLT 408
Query: 361 VLRFIDQKVGAGESVLWTQQQIERGFTAIENLIQ 462
++RFI+QKVG GES+ W QQQI+RGFTA+EN+I+
Sbjct: 409 LVRFIEQKVGTGESLPWVQQQIDRGFTAVENMIK 510
Score = 230 bits (497), Expect(3) = 3e-084
Identities = 108/152 (71%), Positives = 110/152 (72%)
Frame = -3 / -2
Query: 458 IRFSIAVKPLSICC*VHNTLSPAPTFWSMNLNTVRLWRG*IPEATMLAIW*FKAFFXXXX 279
I FS AVKPLSICC H LSP PTF SMNL VRL RG*IPE TMLAIW F+AFF
Sbjct: 506 IMFSTAVKPLSICCWTHGRLSPVPTFCSMNLTKVRL*RG*IPEHTMLAIWIFRAFFSRSW 327
Query: 278 XXXXXXGYLSSKYSVIA*ESPITELPSTNAGTNFIGLSLTNSGSDCSPLRRFTALYS*ST 99
GYLSSKY+ IA*ESPIT PST AGTNFIGLS NSGSDCSPLRR TALYS*S
Sbjct: 326 GKRGR*GYLSSKYNAIA*ESPITASPSTQAGTNFIGLSFMNSGSDCSPLRRLTALYS*SM 147
Query: 98 PLRLRAMRARWEHELRQYEYSISRPTVASTSA 3
PLRL AMR RWE ELRQYE I R AS A
Sbjct: 146 PLRLSAMRTRWEQELRQYE*RIGRAAGASAEA 51
Score = 176 bits (378), Expect(3) = 1e-055
Identities = 81/151 (53%), Positives = 100/151 (66%)
Frame = -2 / -1
Query: 453 VLNSCETSLDLLLSPQHTLPCTNLLVNEPQHCEVMERLNTRSYNACNLVIQSFXXXXXXX 274
VLNSCETS++LLL P+ LPC++LL+NE E+++RLNTR++NAC L IQ
Sbjct: 501 VLNSCETSINLLLDPREALPCSDLLLNESHQGEIVKRLNTRTHNACYLDIQGLLFKVLGQ 322
Query: 273 XXXXXXXXLQIQCYRVRVTYYRTAINQRRDELHRIKLDEFWIRLLALEKVHRLVLVIHTF 94
LQIQCY V V Y ++ RDELHRIKL E IRLLALE+V RLVL+I F
Sbjct: 321 KRALRVLVLQIQCYCVGVADYCVPVDPGRDELHRIKLHELGIRLLALEEVDRLVLIIDAF 142
Query: 93 EIESDAGTVGARAAPVRVQHQSPHRRLHLRH 1
E+E DA VGA AAPVRV+++ RRL H
Sbjct: 141 EVERDADAVGAGAAPVRVENRPRRRRLRRSH 49
Score = 167 bits (360), Expect(2) = 2e-050
Identities = 82/144 (56%), Positives = 92/144 (63%)
Frame = +3 / +3
Query: 27 ATDXXXXXXXXXXPPCPHRSQSQRCGLRVQGGEPSQGRAV*SRIRQA*SYEVRPCVG*WQ 206
A D PP PHR+Q QR L VQGG+P QGRAV*SR+ +A*SYEVRPC+G
Sbjct: 75 AADSLLVLAQLLLPPRPHRAQPQRHRL*VQGGQPPQGRAV*SRVHEA*SYEVRPCLGRRG 254
Query: 207 FCNR*LLRDNTVFGGQVPRASSSTSRPSKESFESPDCKHCSFWYSTSP*PHSVEVH*PEG 386
NR LLR++ VFGGQVP A S RP KE E PD KHC FWYSTS H E+H* +G
Sbjct: 255 RSNRRLLRNSIVFGGQVPSAPSFAPRP*KEGPEYPDSKHCVFWYSTSSQSHLGEIH*AKG 434
Query: 387 WCRGECVVDSTTNRERFHSY*EPD 458
RGE V TT+ RFHS *E D
Sbjct: 435 RNRGEPPVGPTTD**RFHSC*EHD 506
Score = 142 bits (305), Expect(2) = 2e-040
Identities = 77/131 (58%), Positives = 84/131 (64%)
Frame = -1 / -3
Query: 457 SGSQ*L*NLSRFVVESTTHSPLHQPSGQ*TSTL*GYGEVEYQKLQCLQSGDSKLSFEGLE 278
S SQ L*NL + VV T SPL +P Q* S * EVEYQ QCL SG S SF+GL
Sbjct: 505 SCSQQL*NLYQSVVGPTGGSPLFRPFAQ*ISPR*DCEEVEYQNTQCLLSGYSGPSFQGLG 326
Query: 277 VEEEALGTCPPNTVLSRKSHLLQNCHQPTQGRTS*D*A*RILDQTARP*EGSPPCTRNPH 98
+E A GTCPPNT+L R+S L +P QGRTS*D*A DQTARP* G PPCT N
Sbjct: 325 AKEGAEGTCPPNTMLLRRSRRLLRPRRPRQGRTS*D*AS*TRDQTARP*GG*PPCTHNRC 146
Query: 97 L*D*ERCGHGG 65
L* * RCG GG
Sbjct: 145 L*G*ARCGRGG 113
Score = 99.1 bits (210), Expect(3) = e-112
Identities = 39/53 (73%), Positives = 45/53 (84%)
Frame = +1 / +1
Query: 463 LKGCAGKYATGDEVQLADVFLAPQIYAAIERTKIDMSNYPTLARLHSEYMSHP 621
+KGCAGK+A GDEVQLADVFLAPQI+AA+ R +IDMS YPTLARLH +Y P
Sbjct: 505 IKGCAGKFAMGDEVQLADVFLAPQIFAAVTRFQIDMSKYPTLARLHDQYYDTP 663
Score = 83.5 bits (176), Expect(3) = 3e-084
Identities = 37/51 (72%), Positives = 38/51 (74%)
Frame = -3 / -2
Query: 620 GCDMYSEWSLARVG*FDMSILVRSMAA*IWGARNTSASWTSSPVAYFPAHP 468
G Y WSLARVG FDMSI R AA IWGARNTSASWTSSP+A FPA P
Sbjct: 662 GVS*Y*SWSLARVGYFDMSI*KRVTAAKIWGARNTSASWTSSPIANFPAQP 510
Score = 57.0 bits (118), Expect(3) = 1e-055
Identities = 23/48 (47%), Positives = 31/48 (64%)
Frame = -2 / -1
Query: 609 VLRVEPSKSGVV*HVNFSAFNGCIDLGCKEYICQLDFISCCILPGASF 466
+L VEP + G+ HV+ + +LGCKEY+CQLDFIS LP +F
Sbjct: 651 ILIVEPREGGIFRHVDLKTSHCSKNLGCKEYVCQLDFISHSKLPSTAF 508
Score = 51.9 bits (107), Expect(2) = 2e-050
Identities = 24/48 (50%), Positives = 30/48 (62%)
Frame = +3 / +3
Query: 465 KRMRREVCNRR*SPTGRCIPCTPDLCSH*TH*N*HVKLPHSC*APLGV 608
+R+ EVC R*SPTGR IPCTP+ C + N HV++ H AP V
Sbjct: 507 QRLCWEVCYGR*SPTGRRIPCTPNFCCSDSFSNRHVEISHPREAPRSV 650
Score = 50.1 bits (103), Expect(4) = 7e-025
Identities = 22/43 (51%), Positives = 26/43 (60%)
Frame = +2 / +2
Query: 479 GSMQQEMKSNWQMYSLHPRSMQPLNALKLTCQTTPLLLGSTRS 607
GS+ EMKSNWQ YSLHP+ + K TC+ P GST S
Sbjct: 521 GSLLWEMKSNWQTYSLHPKFLLQ*LVFKSTCRNIPPSRGSTIS 649
Score = 44.6 bits (91), Expect(4) = 7e-025
Identities = 24/41 (58%), Positives = 27/41 (65%)
Frame = +2 / +2
Query: 335 VFNLSITSQC*GSLTRRLVQGRVCCGLNNKSREVSQLLRT* 457
VFNL S * SL++R QGR G NN+ EVSQLLRT*
Sbjct: 383 VFNLFTISPW*DSLSKRSEQGRASRGSNNRLIEVSQLLRT* 505
Score = 43.7 bits (89), Expect(2) = 2e-040
Identities = 22/47 (46%), Positives = 26/47 (55%)
Frame = -1 / -3
Query: 607 TPSGA*QEWGSLTCQF*CVQWLHRSGVQGIHLPVGLHLLLHTSRRIL 467
T GA + W TC+F + GVQGI LPVGLHL TS+ L
Sbjct: 649 TDRGASRGWDISTCRFENESLQQKFGVQGIRLPVGLHLP*QTSQHSL 509
Score = 43.2 bits (88), Expect(3) = e-112
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = +1 / +2
Query: 610 MSHPAFEAALPGKQPDAPSSS* 675
M+HPAFEAALP +QPDAP S *
Sbjct: 653 MTHPAFEAALPDRQPDAPFSG* 718
Score = 43.2 bits (88), Expect(4) = 7e-025
Identities = 18/26 (69%), Positives = 20/26 (76%)
Frame = +2 / +2
Query: 221 TLTR*HCIWRTSTQSLLFYLKTFKRK 298
T T+*HCIWRTST S LF KT KR+
Sbjct: 269 TPTQ*HCIWRTSTLSALFCPKTLKRR 346
Score = 37.7 bits (76), Expect(3) = 3e-084
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = -3 / -1
Query: 668 DEGASGCLPGSAASNAGC 615
++GASGC GSAASNAGC
Sbjct: 711 EKGASGCRSGSAASNAGC 658
Score = 30.9 bits (61), Expect(4) = 7e-025
Identities = 15/22 (68%), Positives = 15/22 (68%)
Frame = +2 / +2
Query: 41 TRTGAARAPTVPASLSISKVWI 106
TRTGAA APT AS S SK I
Sbjct: 89 TRTGAAPAPTASASRSTSKASI 154
Score = 22.6 bits (43), Expect(3) = 1e-055
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = -1 / -2
Query: 703 RGTTH*GAVPRRMKGRPVACQGALLQTQGVT 611
R TH + + +G A Q A LQ QGV+
Sbjct: 746 RFVTHPRLMSSQRRGHXAAGQEAQLQMQGVS 654
>gb|BE558314.3|BE558314 HV_CEb0017D03f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0017D03f, mRNA sequence
Length = 822
Score = 301 bits (651), Expect(2) = e-105
Identities = 123/153 (80%), Positives = 137/153 (89%)
Frame = +1 / +2
Query: 4 AEVEATVGRLMLYSYWRSSCSHRARIALNLKGVDYEYKAVNLLKGEQSDPEFVKLNPMKF 183
A EA R +LYSYWRSSCSHR RIALNLKG+DYEYKAVNLLKGEQSDPEF+KLNPMKF
Sbjct: 17 ASAEAPAARPILYSYWRSSCSHRVRIALNLKGIDYEYKAVNLLKGEQSDPEFMKLNPMKF 196
Query: 184 VPALVDGSSVIGDSYAITLYLEDKYPEPPLLPQDLQKKALNHQIASIVASGIQPLHNLTV 363
VPA VDG +VIGDSYAI LYLEDKYP+ PLLPQDL+KKALN QIASIV SGIQPLHNLT+
Sbjct: 197 VPAWVDGDAVIGDSYAIALYLEDKYPQRPLLPQDLEKKALNIQIASIVCSGIQPLHNLTL 376
Query: 364 LRFIDQKVGAGESVLWTQQQIERGFTAIENLIQ 462
+RFI+QKVG GES+ W QQQI+RGFTA+EN+I+
Sbjct: 377 VRFIEQKVGTGESLPWVQQQIDRGFTAVENMIK 475
Score = 230 bits (497), Expect(2) = 3e-078
Identities = 108/152 (71%), Positives = 110/152 (72%)
Frame = -3 / -1
Query: 458 IRFSIAVKPLSICC*VHNTLSPAPTFWSMNLNTVRLWRG*IPEATMLAIW*FKAFFXXXX 279
I FS AVKPLSICC H LSP PTF SMNL VRL RG*IPE TMLAIW F+AFF
Sbjct: 471 IMFSTAVKPLSICCWTHGRLSPVPTFCSMNLTKVRL*RG*IPEHTMLAIWIFRAFFSRSW 292
Query: 278 XXXXXXGYLSSKYSVIA*ESPITELPSTNAGTNFIGLSLTNSGSDCSPLRRFTALYS*ST 99
GYLSSKY+ IA*ESPIT PST AGTNFIGLS NSGSDCSPLRR TALYS*S
Sbjct: 291 GKRGR*GYLSSKYNAIA*ESPITASPSTQAGTNFIGLSFMNSGSDCSPLRRLTALYS*SM 112
Query: 98 PLRLRAMRARWEHELRQYEYSISRPTVASTSA 3
PLRL AMR RWE ELRQYE I R AS A
Sbjct: 111 PLRLSAMRTRWEQELRQYE*RIGRAAGASAEA 16
Score = 172 bits (371), Expect(2) = 1e-052
Identities = 80/147 (54%), Positives = 98/147 (66%)
Frame = -2 / -3
Query: 453 VLNSCETSLDLLLSPQHTLPCTNLLVNEPQHCEVMERLNTRSYNACNLVIQSFXXXXXXX 274
VLNSCETS++LLL P+ LPC++LL NE E+++RLNTR++NAC L IQ
Sbjct: 466 VLNSCETSINLLLDPREALPCSDLLFNESHQGEIVKRLNTRTHNACYLDIQGLLFKVLGQ 287
Query: 273 XXXXXXXXLQIQCYRVRVTYYRTAINQRRDELHRIKLDEFWIRLLALEKVHRLVLVIHTF 94
LQIQCY V V Y ++ RDELHRIKL E IRLLALE+V RLVL+I F
Sbjct: 286 KRALRVLVLQIQCYCVGVADYCVPVDPGRDELHRIKLHELGIRLLALEEVDRLVLIIDAF 107
Query: 93 EIESDAGTVGARAAPVRVQHQSPHRRL 13
E+E DA VGA AAPVRV+++ RRL
Sbjct: 106 EVERDADAVGAGAAPVRVENRPRRRRL 26
Score = 166 bits (356), Expect(2) = 7e-053
Identities = 81/144 (56%), Positives = 91/144 (63%)
Frame = +3 / +1
Query: 27 ATDXXXXXXXXXXPPCPHRSQSQRCGLRVQGGEPSQGRAV*SRIRQA*SYEVRPCVG*WQ 206
A D PP PHR+Q QR L VQGG+P QGRAV*SR+ +A*SYEVRPC+G
Sbjct: 40 AADSLLVLAQLLLPPRPHRAQPQRHRL*VQGGQPPQGRAV*SRVHEA*SYEVRPCLGRRG 219
Query: 207 FCNR*LLRDNTVFGGQVPRASSSTSRPSKESFESPDCKHCSFWYSTSP*PHSVEVH*PEG 386
NR LLR++ VFGGQVP S RP KE E PD KHC FWYSTS H E+H* +G
Sbjct: 220 RSNRRLLRNSIVFGGQVPSTPSFAPRP*KEGPEYPDSKHCVFWYSTSSQSHLGEIH*TKG 399
Query: 387 WCRGECVVDSTTNRERFHSY*EPD 458
RGE V TT+ RFHS *E D
Sbjct: 400 RNRGEPPVGPTTD**RFHSC*EHD 471
Score = 139 bits (298), Expect(2) = 5e-041
Identities = 76/131 (58%), Positives = 83/131 (63%)
Frame = -1 / -2
Query: 457 SGSQ*L*NLSRFVVESTTHSPLHQPSGQ*TSTL*GYGEVEYQKLQCLQSGDSKLSFEGLE 278
S SQ L*NL + VV T SPL +P Q* S * EVEYQ QCL SG S SF+GL
Sbjct: 470 SCSQQL*NLYQSVVGPTGGSPLFRPFVQ*ISPR*DCEEVEYQNTQCLLSGYSGPSFQGLG 291
Query: 277 VEEEALGTCPPNTVLSRKSHLLQNCHQPTQGRTS*D*A*RILDQTARP*EGSPPCTRNPH 98
+E GTCPPNT+L R+S L +P QGRTS*D*A DQTARP* G PPCT N
Sbjct: 290 AKEGVEGTCPPNTMLLRRSRRLLRPRRPRQGRTS*D*AS*TRDQTARP*GG*PPCTHNRC 111
Query: 97 L*D*ERCGHGG 65
L* * RCG GG
Sbjct: 110 L*G*ARCGRGG 78
Score = 102 bits (217), Expect(2) = e-105
Identities = 40/60 (66%), Positives = 49/60 (81%)
Frame = +1 / +2
Query: 463 LKGCAGKYATGDEVQLADVFLAPQIYAAIERTKIDMSNYPTLARLHSEYMSHPAFEAALP 642
+KGCAGK+A GDEVQLADVFLAPQI+AA+ +IDMS YPTLARLH ++M+HP + P
Sbjct: 470 IKGCAGKFAMGDEVQLADVFLAPQIFAAVTPFQIDMSKYPTLARLHDQFMTHPCI*SCPP 649
Score = 82.2 bits (173), Expect(2) = 3e-078
Identities = 37/58 (63%), Positives = 39/58 (67%)
Frame = -3 / -1
Query: 641 GSAASNAGCDMYSEWSLARVG*FDMSILVRSMAA*IWGARNTSASWTSSPVAYFPAHP 468
G GC + WSLARVG FDMSI AA IWGARNTSASWTSSP+A FPA P
Sbjct: 648 GGQLQMQGCVIN*SWSLARVGYFDMSI*KGVTAAKIWGARNTSASWTSSPIANFPAQP 475
Score = 62.0 bits (129), Expect(2) = 7e-053
Identities = 27/52 (51%), Positives = 33/52 (63%)
Frame = +3 / +1
Query: 465 KRMRREVCNRR*SPTGRCIPCTPDLCSH*TH*N*HVKLPHSC*APLGVHVTP 620
+R+ EVC R*SPTGR IPC PD C + N HV++ H C AP V+ TP
Sbjct: 472 QRLCWEVCYGR*SPTGRRIPCPPDFCCSDSFSNRHVEISHPCEAPRSVYDTP 627
Score = 54.2 bits (112), Expect(2) = 1e-052
Identities = 24/49 (48%), Positives = 30/49 (61%)
Frame = -2 / -3
Query: 612 HVLRVEPSKSGVV*HVNFSAFNGCIDLGCKEYICQLDFISCCILPGASF 466
H L VEP K G+ HV+ + +LG KEY+CQLDFIS LP +F
Sbjct: 619 HKLIVEPRKGGIFRHVDLKRSHCSKNLGGKEYVCQLDFISHSKLPSTAF 473
Score = 52.8 bits (109), Expect(5) = 4e-025
Identities = 25/47 (53%), Positives = 28/47 (59%)
Frame = +2 / +3
Query: 479 GSMQQEMKSNWQMYSLHPRSMQPLNALKLTCQTTPLLLGSTRSTCHT 619
GS+ EMKSNWQ YSL PR + K TC+ P L GST S HT
Sbjct: 486 GSLLWEMKSNWQTYSLPPRFLLQ*LLFKSTCRNIPPLRGSTISL*HT 626
Score = 48.7 bits (100), Expect(2) = 5e-041
Identities = 25/52 (48%), Positives = 30/52 (57%)
Frame = -1 / -2
Query: 622 QGVTCTPSGA*QEWGSLTCQF*CVQWLHRSGVQGIHLPVGLHLLLHTSRRIL 467
+GV+ T GA Q W TC+F +SG QGI LPVGLHL TS+ L
Sbjct: 629 RGVS*TDRGASQGWDISTCRFEKESLQQKSGGQGIRLPVGLHLP*QTSQHSL 474
Score = 44.1 bits (90), Expect(5) = 4e-025
Identities = 24/41 (58%), Positives = 26/41 (63%)
Frame = +2 / +3
Query: 335 VFNLSITSQC*GSLTRRLVQGRVCCGLNNKSREVSQLLRT* 457
VFNL S * SL +R QGR G NN+ EVSQLLRT*
Sbjct: 348 VFNLFTISPW*DSLNKRSEQGRASRGSNNRLIEVSQLLRT* 470
Score = 41.8 bits (85), Expect(5) = 4e-025
Identities = 17/26 (65%), Positives = 20/26 (76%)
Frame = +2 / +3
Query: 221 TLTR*HCIWRTSTQSLLFYLKTFKRK 298
T T+*HCIWRTST + LF KT KR+
Sbjct: 234 TPTQ*HCIWRTSTLNALFCPKTLKRR 311
Score = 30.9 bits (61), Expect(5) = 4e-025
Identities = 15/22 (68%), Positives = 15/22 (68%)
Frame = +2 / +3
Query: 41 TRTGAARAPTVPASLSISKVWI 106
TRTGAA APT AS S SK I
Sbjct: 54 TRTGAAPAPTASASRSTSKASI 119
Score = 21.7 bits (41), Expect(5) = 4e-025
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1 / +3
Query: 619 PAFEAALP 642
PAFEAALP
Sbjct: 627 PAFEAALP 650
>gb|BF624084.3|BF624084 HVSMEa0009E20f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0009E20f, mRNA sequence
Length = 790
Score = 303 bits (656), Expect(2) = e-104
Identities = 124/154 (80%), Positives = 138/154 (89%)
Frame = +1 / +1
Query: 1 MAEVEATVGRLMLYSYWRSSCSHRARIALNLKGVDYEYKAVNLLKGEQSDPEFVKLNPMK 180
MA EA R +LYSYWRSSCSHR RIALNLKG+DYEYKAVNLLKGEQSDPEF+KLNPMK
Sbjct: 82 MASAEAPAARPILYSYWRSSCSHRVRIALNLKGIDYEYKAVNLLKGEQSDPEFMKLNPMK 261
Query: 181 FVPALVDGSSVIGDSYAITLYLEDKYPEPPLLPQDLQKKALNHQIASIVASGIQPLHNLT 360
FVPA VDG +VIGDSYAI LYLEDKYP+ PLLPQDL+KKALN QIASIV SGIQPLHNLT
Sbjct: 262 FVPAWVDGDAVIGDSYAIALYLEDKYPQRPLLPQDLEKKALNIQIASIVCSGIQPLHNLT 441
Query: 361 VLRFIDQKVGAGESVLWTQQQIERGFTAIENLIQ 462
++RFI+QKVG GES+ W QQQI+RGFTA+EN+I+
Sbjct: 442 LVRFIEQKVGTGESLPWVQQQIDRGFTAVENMIK 543
Score = 230 bits (497), Expect(2) = 3e-079
Identities = 108/152 (71%), Positives = 110/152 (72%)
Frame = -3 / -3
Query: 458 IRFSIAVKPLSICC*VHNTLSPAPTFWSMNLNTVRLWRG*IPEATMLAIW*FKAFFXXXX 279
I FS AVKPLSICC H LSP PTF SMNL VRL RG*IPE TMLAIW F+AFF
Sbjct: 539 IMFSTAVKPLSICCWTHGRLSPVPTFCSMNLTKVRL*RG*IPEHTMLAIWIFRAFFSRSW 360
Query: 278 XXXXXXGYLSSKYSVIA*ESPITELPSTNAGTNFIGLSLTNSGSDCSPLRRFTALYS*ST 99
GYLSSKY+ IA*ESPIT PST AGTNFIGLS NSGSDCSPLRR TALYS*S
Sbjct: 359 GKRGR*GYLSSKYNAIA*ESPITASPSTQAGTNFIGLSFMNSGSDCSPLRRLTALYS*SM 180
Query: 98 PLRLRAMRARWEHELRQYEYSISRPTVASTSA 3
PLRL AMR RWE ELRQYE I R AS A
Sbjct: 179 PLRLSAMRTRWEQELRQYE*RIGRAAGASAEA 84
Score = 176 bits (378), Expect(3) = 2e-055
Identities = 81/151 (53%), Positives = 100/151 (66%)
Frame = -2 / -2
Query: 453 VLNSCETSLDLLLSPQHTLPCTNLLVNEPQHCEVMERLNTRSYNACNLVIQSFXXXXXXX 274
VLNSCETS++LLL P+ LPC++LL+NE E+++RLNTR++NAC L IQ
Sbjct: 534 VLNSCETSINLLLDPREALPCSDLLLNESHQGEIVKRLNTRTHNACYLDIQGLLFKVLGQ 355
Query: 273 XXXXXXXXLQIQCYRVRVTYYRTAINQRRDELHRIKLDEFWIRLLALEKVHRLVLVIHTF 94
LQIQCY V V Y ++ RDELHRIKL E IRLLALE+V RLVL+I F
Sbjct: 354 KRALRVLVLQIQCYCVGVADYCVPVDPGRDELHRIKLHELGIRLLALEEVDRLVLIIDAF 175
Query: 93 EIESDAGTVGARAAPVRVQHQSPHRRLHLRH 1
E+E DA VGA AAPVRV+++ RRL H
Sbjct: 174 EVERDADAVGAGAAPVRVENRPRRRRLRRSH 82
Score = 167 bits (360), Expect(3) = 2e-054
Identities = 82/144 (56%), Positives = 92/144 (63%)
Frame = +3 / +3
Query: 27 ATDXXXXXXXXXXPPCPHRSQSQRCGLRVQGGEPSQGRAV*SRIRQA*SYEVRPCVG*WQ 206
A D PP PHR+Q QR L VQGG+P QGRAV*SR+ +A*SYEVRPC+G
Sbjct: 108 AADSLLVLAQLLLPPRPHRAQPQRHRL*VQGGQPPQGRAV*SRVHEA*SYEVRPCLGRRG 287
Query: 207 FCNR*LLRDNTVFGGQVPRASSSTSRPSKESFESPDCKHCSFWYSTSP*PHSVEVH*PEG 386
NR LLR++ VFGGQVP A S RP KE E PD KHC FWYSTS H E+H* +G
Sbjct: 288 RSNRRLLRNSIVFGGQVPSAPSFAPRP*KEGPEYPDSKHCVFWYSTSSQSHLGEIH*AKG 467
Query: 387 WCRGECVVDSTTNRERFHSY*EPD 458
RGE V TT+ RFHS *E D
Sbjct: 468 RNRGEPPVGPTTD**RFHSC*EHD 539
Score = 142 bits (305), Expect(2) = 4e-040
Identities = 77/131 (58%), Positives = 84/131 (64%)
Frame = -1 / -1
Query: 457 SGSQ*L*NLSRFVVESTTHSPLHQPSGQ*TSTL*GYGEVEYQKLQCLQSGDSKLSFEGLE 278
S SQ L*NL + VV T SPL +P Q* S * EVEYQ QCL SG S SF+GL
Sbjct: 538 SCSQQL*NLYQSVVGPTGGSPLFRPFAQ*ISPR*DCEEVEYQNTQCLLSGYSGPSFQGLG 359
Query: 277 VEEEALGTCPPNTVLSRKSHLLQNCHQPTQGRTS*D*A*RILDQTARP*EGSPPCTRNPH 98
+E A GTCPPNT+L R+S L +P QGRTS*D*A DQTARP* G PPCT N
Sbjct: 358 AKEGAEGTCPPNTMLLRRSRRLLRPRRPRQGRTS*D*AS*TRDQTARP*GG*PPCTHNRC 179
Query: 97 L*D*ERCGHGG 65
L* * RCG GG
Sbjct: 178 L*G*ARCGRGG 146
Score = 96.4 bits (204), Expect(2) = e-104
Identities = 39/60 (65%), Positives = 46/60 (76%)
Frame = +1 / +1
Query: 463 LKGCAGKYATGDEVQLADVFLAPQIYAAIERTKIDMSNYPTLARLHSEYMSHPAFEAALP 642
+KGCAGK+A GDEVQLADVFLAPQ +AA+ R +IDMS YPTLARLH Y+ P + P
Sbjct: 538 IKGCAGKFAMGDEVQLADVFLAPQDFAAVTRFQIDMSKYPTLARLHDRYIDTPCI*SFAP 717
Score = 85.4 bits (180), Expect(2) = 3e-079
Identities = 37/58 (63%), Positives = 40/58 (68%)
Frame = -3 / -3
Query: 641 GSAASNAGCDMYSEWSLARVG*FDMSILVRSMAA*IWGARNTSASWTSSPVAYFPAHP 468
G+ G +Y WSLARVG FDMSI R AA WGARNTSASWTSSP+A FPA P
Sbjct: 716 GAKLQMQGVSIYRSWSLARVGYFDMSI*KRVTAAKSWGARNTSASWTSSPIANFPAQP 543
Score = 53.3 bits (110), Expect(3) = 2e-055
Identities = 22/45 (48%), Positives = 28/45 (62%)
Frame = -2 / -2
Query: 600 VEPSKSGVV*HVNFSAFNGCIDLGCKEYICQLDFISCCILPGASF 466
VEP + G+ HV+ + LGCKEY+CQLDFIS LP +F
Sbjct: 675 VEPREGGIFRHVDLKTSHCSKILGCKEYVCQLDFISHSKLPSTAF 541
Score = 51.5 bits (106), Expect(3) = 2e-054
Identities = 24/49 (48%), Positives = 30/49 (61%)
Frame = +3 / +3
Query: 465 KRMRREVCNRR*SPTGRCIPCTPDLCSH*TH*N*HVKLPHSC*APLGVH 611
+R+ EVC R*SPTGR IPCTP C + N HV++ H AP V+
Sbjct: 540 QRLCWEVCYGR*SPTGRRIPCTPRFCCSDSFSNRHVEISHPREAPRSVY 686
Score = 49.6 bits (102), Expect(5) = 3e-028
Identities = 21/41 (51%), Positives = 25/41 (60%)
Frame = +2 / +2
Query: 479 GSMQQEMKSNWQMYSLHPRSMQPLNALKLTCQTTPLLLGST 601
GS+ EMKSNWQ YSLHP+ + K TC+ P GST
Sbjct: 554 GSLLWEMKSNWQTYSLHPKILLQ*LVFKSTCRNIPPSRGST 676
Score = 44.6 bits (91), Expect(5) = 3e-028
Identities = 24/41 (58%), Positives = 27/41 (65%)
Frame = +2 / +2
Query: 335 VFNLSITSQC*GSLTRRLVQGRVCCGLNNKSREVSQLLRT* 457
VFNL S * SL++R QGR G NN+ EVSQLLRT*
Sbjct: 416 VFNLFTISPW*DSLSKRSEQGRASRGSNNRLIEVSQLLRT* 538
Score = 43.2 bits (88), Expect(5) = 3e-028
Identities = 18/26 (69%), Positives = 20/26 (76%)
Frame = +2 / +2
Query: 221 TLTR*HCIWRTSTQSLLFYLKTFKRK 298
T T+*HCIWRTST S LF KT KR+
Sbjct: 302 TPTQ*HCIWRTSTLSALFCPKTLKRR 379
Score = 42.8 bits (87), Expect(2) = 4e-040
Identities = 22/47 (46%), Positives = 25/47 (53%)
Frame = -1 / -1
Query: 607 TPSGA*QEWGSLTCQF*CVQWLHRSGVQGIHLPVGLHLLLHTSRRIL 467
T GA + W TC+F GVQGI LPVGLHL TS+ L
Sbjct: 682 TDRGASRGWDISTCRFENESLQQNLGVQGIRLPVGLHLP*QTSQHSL 542
Score = 32.2 bits (64), Expect(3) = 2e-054
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +1 / +2
Query: 610 MSHPAFEAALPGKQPDAPSSS*ELHPSV 693
++HPAFEA+LPG + P + P V
Sbjct: 686 LTHPAFEASLPGPEARCPFLCLNIRPGV 769
Score = 30.9 bits (61), Expect(5) = 3e-028
Identities = 15/22 (68%), Positives = 15/22 (68%)
Frame = +2 / +2
Query: 41 TRTGAARAPTVPASLSISKVWI 106
TRTGAA APT AS S SK I
Sbjct: 122 TRTGAAPAPTASASRSTSKASI 187
Score = 29.0 bits (57), Expect(5) = 3e-028
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +3 / +1
Query: 615 TPCV*SSAPWQATGRPFIL 671
TPC+*S APW PF L
Sbjct: 691 TPCI*SFAPWPGGPMPFPL 747
Score = 25.4 bits (49), Expect(3) = 2e-055
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -3 / -2
Query: 644 PGSAASNAGC 615
PGS ASNAGC
Sbjct: 720 PGSEASNAGC 691
>gb|AL504653.1|AL504653 AL504653 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW05P05V 5', mRNA sequence
Length = 700
Score = 301 bits (651), Expect(4) = e-100
Identities = 123/154 (79%), Positives = 138/154 (89%)
Frame = +1 / +1
Query: 1 MAEVEATVGRLMLYSYWRSSCSHRARIALNLKGVDYEYKAVNLLKGEQSDPEFVKLNPMK 180
MA EA R +LYSYWRSSCSHR RIALNLKG+DYEYKAVNLLKGEQSDPEF+KLNPMK
Sbjct: 70 MASAEAPAARPILYSYWRSSCSHRVRIALNLKGIDYEYKAVNLLKGEQSDPEFMKLNPMK 249
Query: 181 FVPALVDGSSVIGDSYAITLYLEDKYPEPPLLPQDLQKKALNHQIASIVASGIQPLHNLT 360
FVPA V+G +VIGDSYAI LYLEDKYP+ PLLPQDL+KKALN QIASIV SGIQPLHNLT
Sbjct: 250 FVPAWVNGDAVIGDSYAIALYLEDKYPQRPLLPQDLEKKALNIQIASIVCSGIQPLHNLT 429
Query: 361 VLRFIDQKVGAGESVLWTQQQIERGFTAIENLIQ 462
++RFI+QKVG GES+ W QQQI+RGFTA+EN+I+
Sbjct: 430 LVRFIEQKVGTGESLPWVQQQIDRGFTAVENMIK 531
Score = 227 bits (491), Expect(4) = 1e-073
Identities = 107/152 (70%), Positives = 109/152 (71%)
Frame = -3 / -3
Query: 458 IRFSIAVKPLSICC*VHNTLSPAPTFWSMNLNTVRLWRG*IPEATMLAIW*FKAFFXXXX 279
I FS AVKPLSICC H LSP PTF SMNL VRL RG*IPE TMLAIW F+AFF
Sbjct: 527 IMFSTAVKPLSICCWTHGRLSPVPTFCSMNLTKVRL*RG*IPEHTMLAIWIFRAFFSRSW 348
Query: 278 XXXXXXGYLSSKYSVIA*ESPITELPSTNAGTNFIGLSLTNSGSDCSPLRRFTALYS*ST 99
GYLSSKY+ IA*ESPIT P T AGTNFIGLS NSGSDCSPLRR TALYS*S
Sbjct: 347 GKRGR*GYLSSKYNAIA*ESPITASPLTQAGTNFIGLSFMNSGSDCSPLRRLTALYS*SI 168
Query: 98 PLRLRAMRARWEHELRQYEYSISRPTVASTSA 3
PLRL AMR RWE ELRQYE I R AS A
Sbjct: 167 PLRLSAMRTRWEQELRQYE*RIGRAAGASAEA 72
Score = 186 bits (400), Expect(2) = 2e-053
Identities = 85/151 (56%), Positives = 104/151 (68%)
Frame = -2 / -2
Query: 453 VLNSCETSLDLLLSPQHTLPCTNLLVNEPQHCEVMERLNTRSYNACNLVIQSFXXXXXXX 274
VLNSCETS++LLL P+ LPC++LL+NE E+++RLNTR++NAC L IQ
Sbjct: 522 VLNSCETSINLLLDPREALPCSDLLLNESHQGEIVKRLNTRTHNACYLDIQGLLFKVLGQ 343
Query: 273 XXXXXXXXLQIQCYRVRVTYYRTAINQRRDELHRIKLDEFWIRLLALEKVHRLVLVIHTF 94
LQIQCY VRVT Y A++ RDELHRIKL E IRLLALE+V RLVL+I TF
Sbjct: 342 KRALRVLVLQIQCYCVRVTDYCVAVDPGRDELHRIKLHELGIRLLALEEVDRLVLIIDTF 163
Query: 93 EIESDAGTVGARAAPVRVQHQSPHRRLHLRH 1
E+E DA VGA AAPVRV+++ RRL H
Sbjct: 162 EVERDADAVGAGAAPVRVENRPRRRRLRRSH 70
Score = 171 bits (369), Expect(2) = 7e-050
Identities = 83/144 (57%), Positives = 94/144 (65%)
Frame = +3 / +3
Query: 27 ATDXXXXXXXXXXPPCPHRSQSQRCGLRVQGGEPSQGRAV*SRIRQA*SYEVRPCVG*WQ 206
A D PP PHR+Q QR L VQGG+P QGRAV*SR+ +A*SYEVRPC+G +
Sbjct: 96 AADSLLVLAQLLLPPRPHRAQPQRYRL*VQGGQPPQGRAV*SRVHEA*SYEVRPCLGQRR 275
Query: 207 FCNR*LLRDNTVFGGQVPRASSSTSRPSKESFESPDCKHCSFWYSTSP*PHSVEVH*PEG 386
NR*LLR++ VFGGQVP A S RP KE E PD KHC FWYSTS H E+H* +G
Sbjct: 276 RSNR*LLRNSIVFGGQVPSAPSFAPRP*KEGPEYPDSKHCVFWYSTSSQSHLGEIH*AKG 455
Query: 387 WCRGECVVDSTTNRERFHSY*EPD 458
RGE V TT+ RFHS *E D
Sbjct: 456 RNRGEPPVGPTTD**RFHSC*EHD 527
Score = 147 bits (316), Expect(2) = 4e-040
Identities = 79/131 (60%), Positives = 85/131 (64%)
Frame = -1 / -1
Query: 457 SGSQ*L*NLSRFVVESTTHSPLHQPSGQ*TSTL*GYGEVEYQKLQCLQSGDSKLSFEGLE 278
S SQ L*NL + VV T SPL +P Q* S * EVEYQ QCL SG S SF+GL
Sbjct: 526 SCSQQL*NLYQSVVGPTGGSPLFRPFAQ*ISPR*DCEEVEYQNTQCLLSGYSGPSFQGLG 347
Query: 277 VEEEALGTCPPNTVLSRKSHLLQNCHQPTQGRTS*D*A*RILDQTARP*EGSPPCTRNPH 98
+E A GTCPPNT+L RKSH L P QGRTS*D*A DQTARP* G PPCT N +
Sbjct: 346 AKEGAEGTCPPNTMLLRKSHRLLRRR*PRQGRTS*D*AS*TRDQTARP*GG*PPCTHNRY 167
Query: 97 L*D*ERCGHGG 65
L* * RCG GG
Sbjct: 166 L*G*ARCGRGG 134
Score = 69.3 bits (145), Expect(4) = e-100
Identities = 27/36 (75%), Positives = 33/36 (91%)
Frame = +1 / +1
Query: 463 LKGCAGKYATGDEVQLADVFLAPQIYAAIERTKIDM 570
+KGCAGK+A GDEVQLADVFLAPQI+AA+ R +ID+
Sbjct: 526 IKGCAGKFAMGDEVQLADVFLAPQIFAAVTRFQIDI 633
Score = 60.6 bits (126), Expect(4) = 1e-073
Identities = 26/34 (76%), Positives = 27/34 (79%)
Frame = -3 / -3
Query: 569 MSILVRSMAA*IWGARNTSASWTSSPVAYFPAHP 468
MSI R AA IWGARNTSASWTSSP+A FPA P
Sbjct: 632 MSI*KRVTAAKIWGARNTSASWTSSPIANFPAQP 531
Score = 48.3 bits (99), Expect(4) = 9e-025
Identities = 20/27 (74%), Positives = 22/27 (81%)
Frame = +2 / +2
Query: 218 VTLTR*HCIWRTSTQSLLFYLKTFKRK 298
VTLT+*HCIWRTST S LF KT KR+
Sbjct: 287 VTLTQ*HCIWRTSTLSALFCPKTLKRR 367
Score = 46.0 bits (94), Expect(2) = 7e-050
Identities = 20/37 (54%), Positives = 24/37 (64%)
Frame = +3 / +3
Query: 465 KRMRREVCNRR*SPTGRCIPCTPDLCSH*TH*N*HVK 575
+R+ EVC R*SPTGR IPCTPD C + N H +
Sbjct: 528 QRLCWEVCYGR*SPTGRRIPCTPDFCCSDSFSNRHCR 638
Score = 44.6 bits (91), Expect(4) = 9e-025
Identities = 24/41 (58%), Positives = 27/41 (65%)
Frame = +2 / +2
Query: 335 VFNLSITSQC*GSLTRRLVQGRVCCGLNNKSREVSQLLRT* 457
VFNL S * SL++R QGR G NN+ EVSQLLRT*
Sbjct: 404 VFNLFTISPW*DSLSKRSEQGRASRGSNNRLIEVSQLLRT* 526
Score = 43.7 bits (89), Expect(2) = 2e-053
Identities = 16/24 (66%), Positives = 19/24 (79%)
Frame = -2 / -2
Query: 537 DLGCKEYICQLDFISCCILPGASF 466
+LGCKEY+CQLDFIS LP +F
Sbjct: 600 NLGCKEYVCQLDFISHSKLPSTAF 529
Score = 42.8 bits (87), Expect(4) = 9e-025
Identities = 19/37 (51%), Positives = 21/37 (56%)
Frame = +2 / +2
Query: 479 GSMQQEMKSNWQMYSLHPRSMQPLNALKLTCQTTPLL 589
GS+ EMKSNWQ YSLHPR + K T P L
Sbjct: 542 GSLLWEMKSNWQTYSLHPRFLLQ*LVFKSTLSKYPTL 652
Score = 37.7 bits (76), Expect(2) = 4e-040
Identities = 18/34 (52%), Positives = 21/34 (61%)
Frame = -1 / -1
Query: 568 CQF*CVQWLHRSGVQGIHLPVGLHLLLHTSRRIL 467
C+F +SGVQGI LPVGLHL TS+ L
Sbjct: 631 CRFENESLQQKSGVQGIRLPVGLHLP*QTSQHSL 530
Score = 32.7 bits (65), Expect(4) = 9e-025
Identities = 16/22 (72%), Positives = 16/22 (72%)
Frame = +2 / +2
Query: 41 TRTGAARAPTVPASLSISKVWI 106
TRTGAA APT AS S SKV I
Sbjct: 110 TRTGAAPAPTASASRSTSKVSI 175
Score = 29.0 bits (57), Expect(4) = e-100
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +1 / +2
Query: 559 KIDMSNYPTLARLHSEYMSHP 621
K +S YPTLARLH + P
Sbjct: 623 KSTLSKYPTLARLHDQVYDTP 685
Score = 24.9 bits (48), Expect(4) = e-100
Identities = 8/10 (80%), Positives = 10/10 (100%)
Frame = +1 / +3
Query: 604 EYMSHPAFEA 633
+YM+HPAFEA
Sbjct: 669 KYMTHPAFEA 698
Score = 24.0 bits (46), Expect(4) = 1e-073
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -3 / -2
Query: 599 WSLARVG*FD 570
WSLARVG FD
Sbjct: 663 WSLARVGYFD 634
Score = 22.1 bits (42), Expect(4) = 1e-073
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = -3 / -1
Query: 635 AASNAGCDMY 606
AASNAGC +Y
Sbjct: 700 AASNAGCVIY 671
>gb|BQ466319.1|BQ466319 HT02D06r HT Hordeum vulgare subsp. vulgare cDNA clone HT02D06
5-PRIME, mRNA sequence
Length = 668
Score = 301 bits (651), Expect(2) = 4e-096
Identities = 123/154 (79%), Positives = 138/154 (89%)
Frame = +1 / +2
Query: 1 MAEVEATVGRLMLYSYWRSSCSHRARIALNLKGVDYEYKAVNLLKGEQSDPEFVKLNPMK 180
MA EA R +LYSYWRSSCSHR RIALNLKG+DYEYKAVNLLKGEQSDPEF+KLNPMK
Sbjct: 68 MASAEAPAARPILYSYWRSSCSHRVRIALNLKGIDYEYKAVNLLKGEQSDPEFMKLNPMK 247
Query: 181 FVPALVDGSSVIGDSYAITLYLEDKYPEPPLLPQDLQKKALNHQIASIVASGIQPLHNLT 360
FVPA V+G +VIGDSYAI LYLEDKYP+ PLLPQDL+KKALN QIASIV SGIQPLHNLT
Sbjct: 248 FVPAWVNGDAVIGDSYAIALYLEDKYPQRPLLPQDLEKKALNIQIASIVCSGIQPLHNLT 427
Query: 361 VLRFIDQKVGAGESVLWTQQQIERGFTAIENLIQ 462
++RFI+QKVG GES+ W QQQI+RGFTA+EN+I+
Sbjct: 428 LVRFIEQKVGTGESLPWVQQQIDRGFTAVENMIK 529
Score = 227 bits (491), Expect(2) = 5e-071
Identities = 107/152 (70%), Positives = 109/152 (71%)
Frame = -3 / -3
Query: 458 IRFSIAVKPLSICC*VHNTLSPAPTFWSMNLNTVRLWRG*IPEATMLAIW*FKAFFXXXX 279
I FS AVKPLSICC H LSP PTF SMNL VRL RG*IPE TMLAIW F+AFF
Sbjct: 525 IMFSTAVKPLSICCWTHGRLSPVPTFCSMNLTKVRL*RG*IPEHTMLAIWIFRAFFSRSW 346
Query: 278 XXXXXXGYLSSKYSVIA*ESPITELPSTNAGTNFIGLSLTNSGSDCSPLRRFTALYS*ST 99
GYLSSKY+ IA*ESPIT P T AGTNFIGLS NSGSDCSPLRR TALYS*S
Sbjct: 345 GKRGR*GYLSSKYNAIA*ESPITASPLTQAGTNFIGLSFMNSGSDCSPLRRLTALYS*SI 166
Query: 98 PLRLRAMRARWEHELRQYEYSISRPTVASTSA 3
PLRL AMR RWE ELRQYE I R AS A
Sbjct: 165 PLRLSAMRTRWEQELRQYE*RIGRAAGASAEA 70
Score = 186 bits (400), Expect(2) = 4e-054
Identities = 85/151 (56%), Positives = 104/151 (68%)
Frame = -2 / -2
Query: 453 VLNSCETSLDLLLSPQHTLPCTNLLVNEPQHCEVMERLNTRSYNACNLVIQSFXXXXXXX 274
VLNSCETS++LLL P+ LPC++LL+NE E+++RLNTR++NAC L IQ
Sbjct: 520 VLNSCETSINLLLDPREALPCSDLLLNESHQGEIVKRLNTRTHNACYLDIQGLLFKVLGQ 341
Query: 273 XXXXXXXXLQIQCYRVRVTYYRTAINQRRDELHRIKLDEFWIRLLALEKVHRLVLVIHTF 94
LQIQCY VRVT Y A++ RDELHRIKL E IRLLALE+V RLVL+I TF
Sbjct: 340 KRALRVLVLQIQCYCVRVTDYCVAVDPGRDELHRIKLHELGIRLLALEEVDRLVLIIDTF 161
Query: 93 EIESDAGTVGARAAPVRVQHQSPHRRLHLRH 1
E+E DA VGA AAPVRV+++ RRL H
Sbjct: 160 EVERDADAVGAGAAPVRVENRPRRRRLRRSH 68
Score = 171 bits (369), Expect(2) = 9e-050
Identities = 83/144 (57%), Positives = 94/144 (65%)
Frame = +3 / +1
Query: 27 ATDXXXXXXXXXXPPCPHRSQSQRCGLRVQGGEPSQGRAV*SRIRQA*SYEVRPCVG*WQ 206
A D PP PHR+Q QR L VQGG+P QGRAV*SR+ +A*SYEVRPC+G +
Sbjct: 94 AADSLLVLAQLLLPPRPHRAQPQRYRL*VQGGQPPQGRAV*SRVHEA*SYEVRPCLGQRR 273
Query: 207 FCNR*LLRDNTVFGGQVPRASSSTSRPSKESFESPDCKHCSFWYSTSP*PHSVEVH*PEG 386
NR*LLR++ VFGGQVP A S RP KE E PD KHC FWYSTS H E+H* +G
Sbjct: 274 RSNR*LLRNSIVFGGQVPSAPSFAPRP*KEGPEYPDSKHCVFWYSTSSQSHLGEIH*AKG 453
Query: 387 WCRGECVVDSTTNRERFHSY*EPD 458
RGE V TT+ RFHS *E D
Sbjct: 454 RNRGEPPVGPTTD**RFHSC*EHD 525
Score = 147 bits (316), Expect(2) = 3e-040
Identities = 79/131 (60%), Positives = 85/131 (64%)
Frame = -1 / -1
Query: 457 SGSQ*L*NLSRFVVESTTHSPLHQPSGQ*TSTL*GYGEVEYQKLQCLQSGDSKLSFEGLE 278
S SQ L*NL + VV T SPL +P Q* S * EVEYQ QCL SG S SF+GL
Sbjct: 524 SCSQQL*NLYQSVVGPTGGSPLFRPFAQ*ISPR*DCEEVEYQNTQCLLSGYSGPSFQGLG 345
Query: 277 VEEEALGTCPPNTVLSRKSHLLQNCHQPTQGRTS*D*A*RILDQTARP*EGSPPCTRNPH 98
+E A GTCPPNT+L RKSH L P QGRTS*D*A DQTARP* G PPCT N +
Sbjct: 344 AKEGAEGTCPPNTMLLRKSHRLLRRR*PRQGRTS*D*AS*TRDQTARP*GG*PPCTHNRY 165
Query: 97 L*D*ERCGHGG 65
L* * RCG GG
Sbjct: 164 L*G*ARCGRGG 132
Score = 71.2 bits (149), Expect(2) = 4e-096
Identities = 28/36 (77%), Positives = 33/36 (91%)
Frame = +1 / +2
Query: 463 LKGCAGKYATGDEVQLADVFLAPQIYAAIERTKIDM 570
+KGCAGK+A GDEVQLADVFLAPQI+AA+ R +IDM
Sbjct: 524 IKGCAGKFAMGDEVQLADVFLAPQIFAAVTRFQIDM 631
Score = 60.6 bits (126), Expect(2) = 5e-071
Identities = 26/34 (76%), Positives = 27/34 (79%)
Frame = -3 / -3
Query: 569 MSILVRSMAA*IWGARNTSASWTSSPVAYFPAHP 468
MSI R AA IWGARNTSASWTSSP+A FPA P
Sbjct: 630 MSI*KRVTAAKIWGARNTSASWTSSPIANFPAQP 529
Score = 48.3 bits (99), Expect(4) = 3e-024
Identities = 20/27 (74%), Positives = 22/27 (81%)
Frame = +2 / +3
Query: 218 VTLTR*HCIWRTSTQSLLFYLKTFKRK 298
VTLT+*HCIWRTST S LF KT KR+
Sbjct: 285 VTLTQ*HCIWRTSTLSALFCPKTLKRR 365
Score = 46.0 bits (94), Expect(2) = 4e-054
Identities = 18/35 (51%), Positives = 23/35 (65%)
Frame = -2 / -2
Query: 570 HVNFSAFNGCIDLGCKEYICQLDFISCCILPGASF 466
HV+ + +LGCKEY+CQLDFIS LP +F
Sbjct: 631 HVDLKTSHCSKNLGCKEYVCQLDFISHSKLPSTAF 527
Score = 45.5 bits (93), Expect(2) = 9e-050
Identities = 18/26 (69%), Positives = 20/26 (76%)
Frame = +3 / +1
Query: 465 KRMRREVCNRR*SPTGRCIPCTPDLC 542
+R+ EVC R*SPTGR IPCTPD C
Sbjct: 526 QRLCWEVCYGR*SPTGRRIPCTPDFC 603
Score = 44.6 bits (91), Expect(4) = 3e-024
Identities = 24/41 (58%), Positives = 27/41 (65%)
Frame = +2 / +3
Query: 335 VFNLSITSQC*GSLTRRLVQGRVCCGLNNKSREVSQLLRT* 457
VFNL S * SL++R QGR G NN+ EVSQLLRT*
Sbjct: 402 VFNLFTISPW*DSLSKRSEQGRASRGSNNRLIEVSQLLRT* 524
Score = 40.9 bits (83), Expect(4) = 3e-024
Identities = 15/19 (78%), Positives = 16/19 (84%)
Frame = +2 / +3
Query: 479 GSMQQEMKSNWQMYSLHPR 535
GS+ EMKSNWQ YSLHPR
Sbjct: 540 GSLLWEMKSNWQTYSLHPR 596
Score = 38.2 bits (77), Expect(2) = 3e-040
Identities = 18/37 (48%), Positives = 23/37 (62%)
Frame = -1 / -1
Query: 577 SLTCQF*CVQWLHRSGVQGIHLPVGLHLLLHTSRRIL 467
++ C+F +SGVQGI LPVGLHL TS+ L
Sbjct: 638 AVPCRFENESLQQKSGVQGIRLPVGLHLP*QTSQHSL 528
Score = 32.7 bits (65), Expect(4) = 3e-024
Identities = 16/22 (72%), Positives = 16/22 (72%)
Frame = +2 / +3
Query: 41 TRTGAARAPTVPASLSISKVWI 106
TRTGAA APT AS S SKV I
Sbjct: 108 TRTGAAPAPTASASRSTSKVSI 173
>gb|BU984621.1|BU984621 HF04H12r HF Hordeum vulgare subsp. vulgare cDNA clone HF04H12
5-PRIME, mRNA sequence
Length = 566
Score = 234 bits (505), Expect(2) = 4e-096
Identities = 96/118 (81%), Positives = 109/118 (92%)
Frame = +1 / +1
Query: 109 EYKAVNLLKGEQSDPEFVKLNPMKFVPALVDGSSVIGDSYAITLYLEDKYPEPPLLPQDL 288
EYKAVNLLKGEQSDPEF+KLNPMKFVPA V+G +VIGDSYAI LYLEDKYP+ PLLPQDL
Sbjct: 13 EYKAVNLLKGEQSDPEFMKLNPMKFVPAWVNGDAVIGDSYAIALYLEDKYPQRPLLPQDL 192
Query: 289 QKKALNHQIASIVASGIQPLHNLTVLRFIDQKVGAGESVLWTQQQIERGFTAIENLIQ 462
+KKALN QIASIV SGIQPLHNLT++RFI+QKVG GES+ W QQQI+RGFTA+EN+I+
Sbjct: 193 EKKALNIQIASIVCSGIQPLHNLTLVRFIEQKVGTGESLPWVQQQIDRGFTAVENMIK 366
Score = 181 bits (390), Expect(2) = 1e-074
Identities = 84/117 (71%), Positives = 86/117 (73%)
Frame = -3 / -1
Query: 458 IRFSIAVKPLSICC*VHNTLSPAPTFWSMNLNTVRLWRG*IPEATMLAIW*FKAFFXXXX 279
I FS AVKPLSICC H LSP PTF SMNL VRL RG*IPE TMLAIW F+AFF
Sbjct: 362 IMFSTAVKPLSICCWTHGRLSPVPTFCSMNLTKVRL*RG*IPEHTMLAIWIFRAFFSRSW 183
Query: 278 XXXXXXGYLSSKYSVIA*ESPITELPSTNAGTNFIGLSLTNSGSDCSPLRRFTALYS 108
GYLSSKY+ IA*ESPIT P T AGTNFIGLS NSGSDCSPLRR TALYS
Sbjct: 182 GKRGR*GYLSSKYNAIA*ESPITASPLTQAGTNFIGLSFMNSGSDCSPLRRLTALYS 12
Score = 151 bits (325), Expect(2) = 9e-053
Identities = 72/116 (62%), Positives = 82/116 (70%)
Frame = +3 / +3
Query: 111 VQGGEPSQGRAV*SRIRQA*SYEVRPCVG*WQFCNR*LLRDNTVFGGQVPRASSSTSRPS 290
VQGG+P QGRAV*SR+ +A*SYEVRPC+G + NR*LLR++ VFGGQVP A S RP
Sbjct: 15 VQGGQPPQGRAV*SRVHEA*SYEVRPCLGQRRRSNR*LLRNSIVFGGQVPSAPSFAPRP* 194
Query: 291 KESFESPDCKHCSFWYSTSP*PHSVEVH*PEGWCRGECVVDSTTNRERFHSY*EPD 458
KE E PD KHC FWYSTS H E+H* +G RGE V TT+ RFHS *E D
Sbjct: 195 KEGPEYPDSKHCVFWYSTSSQSHLGEIH*AKGRNRGEPPVGPTTD**RFHSC*EHD 362
Score = 143 bits (307), Expect(2) = 9e-049
Identities = 65/117 (55%), Positives = 81/117 (69%)
Frame = -2 / -3
Query: 453 VLNSCETSLDLLLSPQHTLPCTNLLVNEPQHCEVMERLNTRSYNACNLVIQSFXXXXXXX 274
VLNSCETS++LLL P+ LPC++LL+NE E+++RLNTR++NAC L IQ
Sbjct: 357 VLNSCETSINLLLDPREALPCSDLLLNESHQGEIVKRLNTRTHNACYLDIQGLLFKVLGQ 178
Query: 273 XXXXXXXXLQIQCYRVRVTYYRTAINQRRDELHRIKLDEFWIRLLALEKVHRLVLVI 103
LQIQCY VRVT Y A++ RDELHRIKL E IRLLALE+V RLVL++
Sbjct: 177 KRALRVLVLQIQCYCVRVTDYCVAVDPGRDELHRIKLHELGIRLLALEEVDRLVLIL 7
Score = 138 bits (295), Expect(2) = 4e-096
Identities = 54/68 (79%), Positives = 62/68 (91%)
Frame = +1 / +1
Query: 463 LKGCAGKYATGDEVQLADVFLAPQIYAAIERTKIDMSNYPTLARLHSEYMSHPAFEAALP 642
+KGCAGK+A GDEVQLADVFLAPQI+AA+ R +IDMS YPTLARLH +YM+HPAFEAALP
Sbjct: 361 IKGCAGKFAMGDEVQLADVFLAPQIFAAVTRFQIDMSKYPTLARLHDQYMTHPAFEAALP 540
Query: 643 GKQPDAPS 666
+QPDAPS
Sbjct: 541 DRQPDAPS 564
Score = 128 bits (274), Expect(2) = 3e-043
Identities = 70/116 (60%), Positives = 75/116 (64%)
Frame = -1 / -2
Query: 457 SGSQ*L*NLSRFVVESTTHSPLHQPSGQ*TSTL*GYGEVEYQKLQCLQSGDSKLSFEGLE 278
S SQ L*NL + VV T SPL +P Q* S * EVEYQ QCL SG S SF+GL
Sbjct: 361 SCSQQL*NLYQSVVGPTGGSPLFRPFAQ*ISPR*DCEEVEYQNTQCLLSGYSGPSFQGLG 182
Query: 277 VEEEALGTCPPNTVLSRKSHLLQNCHQPTQGRTS*D*A*RILDQTARP*EGSPPCT 110
+E A GTCPPNT+L RKSH L P QGRTS*D*A DQTARP* G PPCT
Sbjct: 181 AKEGAEGTCPPNTMLLRKSHRLLRRR*PRQGRTS*D*AS*TRDQTARP*GG*PPCT 14
Score = 118 bits (253), Expect(2) = 1e-074
Identities = 51/67 (76%), Positives = 54/67 (80%)
Frame = -3 / -1
Query: 668 DEGASGCLPGSAASNAGCDMYSEWSLARVG*FDMSILVRSMAA*IWGARNTSASWTSSPV 489
+EGASGC GSAASNAGC +Y WSLARVG FDMSI R AA IWGARNTSASWTSSP+
Sbjct: 566 EEGASGCRSGSAASNAGCVIY*SWSLARVGYFDMSI*KRVTAAKIWGARNTSASWTSSPI 387
Query: 488 AYFPAHP 468
A FPA P
Sbjct: 386 ANFPAQP 366
Score = 75.8 bits (159), Expect(2) = 9e-053
Identities = 35/68 (51%), Positives = 43/68 (63%)
Frame = +3 / +3
Query: 465 KRMRREVCNRR*SPTGRCIPCTPDLCSH*TH*N*HVKLPHSC*APLGVHVTPCV*SSAPW 644
+R+ EVC R*SPTGR IPCTPD C + N HV++ H AP V+ TPC+*S AP
Sbjct: 363 QRLCWEVCYGR*SPTGRRIPCTPDFCCSDSFSNRHVEISHPREAPRSVYDTPCI*SCAP* 542
Query: 645 QATGRPFI 668
A PF+
Sbjct: 543 PAARCPFL 566
Score = 70.7 bits (148), Expect(2) = 9e-049
Identities = 30/58 (51%), Positives = 38/58 (65%)
Frame = -2 / -3
Query: 639 ERCFKRRV*HVLRVEPSKSGVV*HVNFSAFNGCIDLGCKEYICQLDFISCCILPGASF 466
ER FK RV H+L VEP + G+ HV+ + +LGCKEY+CQLDFIS LP +F
Sbjct: 537 ERSFKCRVCHILIVEPREGGIFRHVDLKTSHCSKNLGCKEYVCQLDFISHSKLPSTAF 364
Score = 70.3 bits (147), Expect(3) = 3e-028
Identities = 33/62 (53%), Positives = 37/62 (59%)
Frame = +2 / +2
Query: 479 GSMQQEMKSNWQMYSLHPRSMQPLNALKLTCQTTPLLLGSTRSTCHTLRLKQRSLASNRT 658
GS+ EMKSNWQ YSLHPR + K TC+ P GST S HTL LK RSL +
Sbjct: 377 GSLLWEMKSNWQTYSLHPRFLLQ*LVFKSTCRNIPPSRGSTISI*HTLHLKLRSLTGSPM 556
Query: 659 PL 664
PL
Sbjct: 557 PL 562
Score = 67.0 bits (140), Expect(2) = 3e-043
Identities = 34/66 (51%), Positives = 39/66 (59%)
Frame = -1 / -2
Query: 664 KGRPVACQGALLQTQGVTCTPSGA*QEWGSLTCQF*CVQWLHRSGVQGIHLPVGLHLLLH 485
KG A QGA LQ QGV+ T GA + W TC+F +SGVQGI LPVGLHL
Sbjct: 562 KGHRAAGQGAQLQMQGVSYTDRGASRGWDISTCRFENESLQQKSGVQGIRLPVGLHLP*Q 383
Query: 484 TSRRIL 467
TS+ L
Sbjct: 382 TSQHSL 365
Score = 48.3 bits (99), Expect(3) = 3e-028
Identities = 20/27 (74%), Positives = 22/27 (81%)
Frame = +2 / +2
Query: 218 VTLTR*HCIWRTSTQSLLFYLKTFKRK 298
VTLT+*HCIWRTST S LF KT KR+
Sbjct: 122 VTLTQ*HCIWRTSTLSALFCPKTLKRR 202
Score = 44.6 bits (91), Expect(3) = 3e-028
Identities = 24/41 (58%), Positives = 27/41 (65%)
Frame = +2 / +2
Query: 335 VFNLSITSQC*GSLTRRLVQGRVCCGLNNKSREVSQLLRT* 457
VFNL S * SL++R QGR G NN+ EVSQLLRT*
Sbjct: 239 VFNLFTISPW*DSLSKRSEQGRASRGSNNRLIEVSQLLRT* 361
>gb|BU985985.1|BU985985 HF09E04r HF Hordeum vulgare subsp. vulgare cDNA clone HF09E04
5-PRIME, mRNA sequence
Length = 566
Score = 234 bits (505), Expect(2) = 4e-096
Identities = 96/118 (81%), Positives = 109/118 (92%)
Frame = +1 / +1
Query: 109 EYKAVNLLKGEQSDPEFVKLNPMKFVPALVDGSSVIGDSYAITLYLEDKYPEPPLLPQDL 288
EYKAVNLLKGEQSDPEF+KLNPMKFVPA V+G +VIGDSYAI LYLEDKYP+ PLLPQDL
Sbjct: 13 EYKAVNLLKGEQSDPEFMKLNPMKFVPAWVNGDAVIGDSYAIALYLEDKYPQRPLLPQDL 192
Query: 289 QKKALNHQIASIVASGIQPLHNLTVLRFIDQKVGAGESVLWTQQQIERGFTAIENLIQ 462
+KKALN QIASIV SGIQPLHNLT++RFI+QKVG GES+ W QQQI+RGFTA+EN+I+
Sbjct: 193 EKKALNIQIASIVCSGIQPLHNLTLVRFIEQKVGTGESLPWVQQQIDRGFTAVENMIK 366
Score = 181 bits (390), Expect(2) = 1e-074
Identities = 84/117 (71%), Positives = 86/117 (73%)
Frame = -3 / -1
Query: 458 IRFSIAVKPLSICC*VHNTLSPAPTFWSMNLNTVRLWRG*IPEATMLAIW*FKAFFXXXX 279
I FS AVKPLSICC H LSP PTF SMNL VRL RG*IPE TMLAIW F+AFF
Sbjct: 362 IMFSTAVKPLSICCWTHGRLSPVPTFCSMNLTKVRL*RG*IPEHTMLAIWIFRAFFSRSW 183
Query: 278 XXXXXXGYLSSKYSVIA*ESPITELPSTNAGTNFIGLSLTNSGSDCSPLRRFTALYS 108
GYLSSKY+ IA*ESPIT P T AGTNFIGLS NSGSDCSPLRR TALYS
Sbjct: 182 GKRGR*GYLSSKYNAIA*ESPITASPLTQAGTNFIGLSFMNSGSDCSPLRRLTALYS 12
Score = 151 bits (325), Expect(2) = 9e-053
Identities = 72/116 (62%), Positives = 82/116 (70%)
Frame = +3 / +3
Query: 111 VQGGEPSQGRAV*SRIRQA*SYEVRPCVG*WQFCNR*LLRDNTVFGGQVPRASSSTSRPS 290
VQGG+P QGRAV*SR+ +A*SYEVRPC+G + NR*LLR++ VFGGQVP A S RP
Sbjct: 15 VQGGQPPQGRAV*SRVHEA*SYEVRPCLGQRRRSNR*LLRNSIVFGGQVPSAPSFAPRP* 194
Query: 291 KESFESPDCKHCSFWYSTSP*PHSVEVH*PEGWCRGECVVDSTTNRERFHSY*EPD 458
KE E PD KHC FWYSTS H E+H* +G RGE V TT+ RFHS *E D
Sbjct: 195 KEGPEYPDSKHCVFWYSTSSQSHLGEIH*AKGRNRGEPPVGPTTD**RFHSC*EHD 362
Score = 143 bits (307), Expect(2) = 9e-049
Identities = 65/117 (55%), Positives = 81/117 (69%)
Frame = -2 / -3
Query: 453 VLNSCETSLDLLLSPQHTLPCTNLLVNEPQHCEVMERLNTRSYNACNLVIQSFXXXXXXX 274
VLNSCETS++LLL P+ LPC++LL+NE E+++RLNTR++NAC L IQ
Sbjct: 357 VLNSCETSINLLLDPREALPCSDLLLNESHQGEIVKRLNTRTHNACYLDIQGLLFKVLGQ 178
Query: 273 XXXXXXXXLQIQCYRVRVTYYRTAINQRRDELHRIKLDEFWIRLLALEKVHRLVLVI 103
LQIQCY VRVT Y A++ RDELHRIKL E IRLLALE+V RLVL++
Sbjct: 177 KRALRVLVLQIQCYCVRVTDYCVAVDPGRDELHRIKLHELGIRLLALEEVDRLVLIL 7
Score = 138 bits (295), Expect(2) = 4e-096
Identities = 54/68 (79%), Positives = 62/68 (91%)
Frame = +1 / +1
Query: 463 LKGCAGKYATGDEVQLADVFLAPQIYAAIERTKIDMSNYPTLARLHSEYMSHPAFEAALP 642
+KGCAGK+A GDEVQLADVFLAPQI+AA+ R +IDMS YPTLARLH +YM+HPAFEAALP
Sbjct: 361 IKGCAGKFAMGDEVQLADVFLAPQIFAAVTRFQIDMSKYPTLARLHDQYMTHPAFEAALP 540
Query: 643 GKQPDAPS 666
+QPDAPS
Sbjct: 541 DRQPDAPS 564
Score = 128 bits (274), Expect(2) = 3e-043
Identities = 70/116 (60%), Positives = 75/116 (64%)
Frame = -1 / -2
Query: 457 SGSQ*L*NLSRFVVESTTHSPLHQPSGQ*TSTL*GYGEVEYQKLQCLQSGDSKLSFEGLE 278
S SQ L*NL + VV T SPL +P Q* S * EVEYQ QCL SG S SF+GL
Sbjct: 361 SCSQQL*NLYQSVVGPTGGSPLFRPFAQ*ISPR*DCEEVEYQNTQCLLSGYSGPSFQGLG 182
Query: 277 VEEEALGTCPPNTVLSRKSHLLQNCHQPTQGRTS*D*A*RILDQTARP*EGSPPCT 110
+E A GTCPPNT+L RKSH L P QGRTS*D*A DQTARP* G PPCT
Sbjct: 181 AKEGAEGTCPPNTMLLRKSHRLLRRR*PRQGRTS*D*AS*TRDQTARP*GG*PPCT 14
Score = 118 bits (253), Expect(2) = 1e-074
Identities = 51/67 (76%), Positives = 54/67 (80%)
Frame = -3 / -1
Query: 668 DEGASGCLPGSAASNAGCDMYSEWSLARVG*FDMSILVRSMAA*IWGARNTSASWTSSPV 489
+EGASGC GSAASNAGC +Y WSLARVG FDMSI R AA IWGARNTSASWTSSP+
Sbjct: 566 EEGASGCRSGSAASNAGCVIY*SWSLARVGYFDMSI*KRVTAAKIWGARNTSASWTSSPI 387
Query: 488 AYFPAHP 468
A FPA P
Sbjct: 386 ANFPAQP 366
Score = 75.8 bits (159), Expect(2) = 9e-053
Identities = 35/68 (51%), Positives = 43/68 (63%)
Frame = +3 / +3
Query: 465 KRMRREVCNRR*SPTGRCIPCTPDLCSH*TH*N*HVKLPHSC*APLGVHVTPCV*SSAPW 644
+R+ EVC R*SPTGR IPCTPD C + N HV++ H AP V+ TPC+*S AP
Sbjct: 363 QRLCWEVCYGR*SPTGRRIPCTPDFCCSDSFSNRHVEISHPREAPRSVYDTPCI*SCAP* 542
Query: 645 QATGRPFI 668
A PF+
Sbjct: 543 PAARCPFL 566
Score = 70.7 bits (148), Expect(2) = 9e-049
Identities = 30/58 (51%), Positives = 38/58 (65%)
Frame = -2 / -3
Query: 639 ERCFKRRV*HVLRVEPSKSGVV*HVNFSAFNGCIDLGCKEYICQLDFISCCILPGASF 466
ER FK RV H+L VEP + G+ HV+ + +LGCKEY+CQLDFIS LP +F
Sbjct: 537 ERSFKCRVCHILIVEPREGGIFRHVDLKTSHCSKNLGCKEYVCQLDFISHSKLPSTAF 364
Score = 70.3 bits (147), Expect(3) = 3e-028
Identities = 33/62 (53%), Positives = 37/62 (59%)
Frame = +2 / +2
Query: 479 GSMQQEMKSNWQMYSLHPRSMQPLNALKLTCQTTPLLLGSTRSTCHTLRLKQRSLASNRT 658
GS+ EMKSNWQ YSLHPR + K TC+ P GST S HTL LK RSL +
Sbjct: 377 GSLLWEMKSNWQTYSLHPRFLLQ*LVFKSTCRNIPPSRGSTISI*HTLHLKLRSLTGSPM 556
Query: 659 PL 664
PL
Sbjct: 557 PL 562
Score = 67.0 bits (140), Expect(2) = 3e-043
Identities = 34/66 (51%), Positives = 39/66 (59%)
Frame = -1 / -2
Query: 664 KGRPVACQGALLQTQGVTCTPSGA*QEWGSLTCQF*CVQWLHRSGVQGIHLPVGLHLLLH 485
KG A QGA LQ QGV+ T GA + W TC+F +SGVQGI LPVGLHL
Sbjct: 562 KGHRAAGQGAQLQMQGVSYTDRGASRGWDISTCRFENESLQQKSGVQGIRLPVGLHLP*Q 383
Query: 484 TSRRIL 467
TS+ L
Sbjct: 382 TSQHSL 365
Score = 48.3 bits (99), Expect(3) = 3e-028
Identities = 20/27 (74%), Positives = 22/27 (81%)
Frame = +2 / +2
Query: 218 VTLTR*HCIWRTSTQSLLFYLKTFKRK 298
VTLT+*HCIWRTST S LF KT KR+
Sbjct: 122 VTLTQ*HCIWRTSTLSALFCPKTLKRR 202
Score = 44.6 bits (91), Expect(3) = 3e-028
Identities = 24/41 (58%), Positives = 27/41 (65%)
Frame = +2 / +2
Query: 335 VFNLSITSQC*GSLTRRLVQGRVCCGLNNKSREVSQLLRT* 457
VFNL S * SL++R QGR G NN+ EVSQLLRT*
Sbjct: 239 VFNLFTISPW*DSLSKRSEQGRASRGSNNRLIEVSQLLRT* 361
>gb|AL503798.1|AL503798 AL503798 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW03H09T 5', mRNA sequence
Length = 700
Score = 301 bits (651), Expect(3) = 3e-095
Identities = 123/154 (79%), Positives = 138/154 (89%)
Frame = +1 / +3
Query: 1 MAEVEATVGRLMLYSYWRSSCSHRARIALNLKGVDYEYKAVNLLKGEQSDPEFVKLNPMK 180
MA EA R +LYSYWRSSCSHR RIALNLKG+DYEYKAVNLLKGEQSDPEF+KLNPMK
Sbjct: 87 MASAEAPAARPILYSYWRSSCSHRVRIALNLKGIDYEYKAVNLLKGEQSDPEFMKLNPMK 266
Query: 181 FVPALVDGSSVIGDSYAITLYLEDKYPEPPLLPQDLQKKALNHQIASIVASGIQPLHNLT 360
FVPA V+G +VIGDSYAI LYLEDKYP+ PLLPQDL+KKALN QIASIV SGIQPLHNLT
Sbjct: 267 FVPAWVNGDAVIGDSYAIALYLEDKYPQRPLLPQDLEKKALNIQIASIVCSGIQPLHNLT 446
Query: 361 VLRFIDQKVGAGESVLWTQQQIERGFTAIENLIQ 462
++RFI+QKVG GES+ W QQQI+RGFTA+EN+I+
Sbjct: 447 LVRFIEQKVGTGESLPWVQQQIDRGFTAVENMIK 548
Score = 227 bits (491), Expect(2) = 9e-070
Identities = 107/152 (70%), Positives = 109/152 (71%)
Frame = -3 / -1
Query: 458 IRFSIAVKPLSICC*VHNTLSPAPTFWSMNLNTVRLWRG*IPEATMLAIW*FKAFFXXXX 279
I FS AVKPLSICC H LSP PTF SMNL VRL RG*IPE TMLAIW F+AFF
Sbjct: 544 IMFSTAVKPLSICCWTHGRLSPVPTFCSMNLTKVRL*RG*IPEHTMLAIWIFRAFFSRSW 365
Query: 278 XXXXXXGYLSSKYSVIA*ESPITELPSTNAGTNFIGLSLTNSGSDCSPLRRFTALYS*ST 99
GYLSSKY+ IA*ESPIT P T AGTNFIGLS NSGSDCSPLRR TALYS*S
Sbjct: 364 GKRGR*GYLSSKYNAIA*ESPITASPLTQAGTNFIGLSFMNSGSDCSPLRRLTALYS*SI 185
Query: 98 PLRLRAMRARWEHELRQYEYSISRPTVASTSA 3
PLRL AMR RWE ELRQYE I R AS A
Sbjct: 184 PLRLSAMRTRWEQELRQYE*RIGRAAGASAEA 89
Score = 186 bits (400), Expect(2) = 2e-053
Identities = 85/151 (56%), Positives = 104/151 (68%)
Frame = -2 / -3
Query: 453 VLNSCETSLDLLLSPQHTLPCTNLLVNEPQHCEVMERLNTRSYNACNLVIQSFXXXXXXX 274
VLNSCETS++LLL P+ LPC++LL+NE E+++RLNTR++NAC L IQ
Sbjct: 539 VLNSCETSINLLLDPREALPCSDLLLNESHQGEIVKRLNTRTHNACYLDIQGLLFKVLGQ 360
Query: 273 XXXXXXXXLQIQCYRVRVTYYRTAINQRRDELHRIKLDEFWIRLLALEKVHRLVLVIHTF 94
LQIQCY VRVT Y A++ RDELHRIKL E IRLLALE+V RLVL+I TF
Sbjct: 359 KRALRVLVLQIQCYCVRVTDYCVAVDPGRDELHRIKLHELGIRLLALEEVDRLVLIIDTF 180
Query: 93 EIESDAGTVGARAAPVRVQHQSPHRRLHLRH 1
E+E DA VGA AAPVRV+++ RRL H
Sbjct: 179 EVERDADAVGAGAAPVRVENRPRRRRLRRSH 87
Score = 171 bits (369), Expect(2) = 9e-050
Identities = 83/144 (57%), Positives = 94/144 (65%)
Frame = +3 / +2
Query: 27 ATDXXXXXXXXXXPPCPHRSQSQRCGLRVQGGEPSQGRAV*SRIRQA*SYEVRPCVG*WQ 206
A D PP PHR+Q QR L VQGG+P QGRAV*SR+ +A*SYEVRPC+G +
Sbjct: 113 AADSLLVLAQLLLPPRPHRAQPQRYRL*VQGGQPPQGRAV*SRVHEA*SYEVRPCLGQRR 292
Query: 207 FCNR*LLRDNTVFGGQVPRASSSTSRPSKESFESPDCKHCSFWYSTSP*PHSVEVH*PEG 386
NR*LLR++ VFGGQVP A S RP KE E PD KHC FWYSTS H E+H* +G
Sbjct: 293 RSNR*LLRNSIVFGGQVPSAPSFAPRP*KEGPEYPDSKHCVFWYSTSSQSHLGEIH*AKG 472
Query: 387 WCRGECVVDSTTNRERFHSY*EPD 458
RGE V TT+ RFHS *E D
Sbjct: 473 RNRGEPPVGPTTD**RFHSC*EHD 544
Score = 147 bits (316), Expect(2) = 9e-040
Identities = 79/131 (60%), Positives = 85/131 (64%)
Frame = -1 / -2
Query: 457 SGSQ*L*NLSRFVVESTTHSPLHQPSGQ*TSTL*GYGEVEYQKLQCLQSGDSKLSFEGLE 278
S SQ L*NL + VV T SPL +P Q* S * EVEYQ QCL SG S SF+GL
Sbjct: 543 SCSQQL*NLYQSVVGPTGGSPLFRPFAQ*ISPR*DCEEVEYQNTQCLLSGYSGPSFQGLG 364
Query: 277 VEEEALGTCPPNTVLSRKSHLLQNCHQPTQGRTS*D*A*RILDQTARP*EGSPPCTRNPH 98
+E A GTCPPNT+L RKSH L P QGRTS*D*A DQTARP* G PPCT N +
Sbjct: 363 AKEGAEGTCPPNTMLLRKSHRLLRRR*PRQGRTS*D*AS*TRDQTARP*GG*PPCTHNRY 184
Query: 97 L*D*ERCGHGG 65
L* * RCG GG
Sbjct: 183 L*G*ARCGRGG 151
Score = 62.9 bits (131), Expect(3) = 3e-095
Identities = 24/29 (82%), Positives = 28/29 (96%)
Frame = +1 / +3
Query: 463 LKGCAGKYATGDEVQLADVFLAPQIYAAI 549
+KGCAGK+A GDEVQLADVFLAPQI+AA+
Sbjct: 543 IKGCAGKFAMGDEVQLADVFLAPQIFAAV 629
Score = 56.5 bits (117), Expect(2) = 9e-070
Identities = 22/26 (84%), Positives = 23/26 (88%)
Frame = -3 / -1
Query: 545 AA*IWGARNTSASWTSSPVAYFPAHP 468
AA IWGARNTSASWTSSP+A FPA P
Sbjct: 625 AAKIWGARNTSASWTSSPIANFPAQP 548
Score = 48.3 bits (99), Expect(4) = 3e-024
Identities = 20/27 (74%), Positives = 22/27 (81%)
Frame = +2 / +1
Query: 218 VTLTR*HCIWRTSTQSLLFYLKTFKRK 298
VTLT+*HCIWRTST S LF KT KR+
Sbjct: 304 VTLTQ*HCIWRTSTLSALFCPKTLKRR 384
Score = 45.5 bits (93), Expect(2) = 9e-050
Identities = 18/26 (69%), Positives = 20/26 (76%)
Frame = +3 / +2
Query: 465 KRMRREVCNRR*SPTGRCIPCTPDLC 542
+R+ EVC R*SPTGR IPCTPD C
Sbjct: 545 QRLCWEVCYGR*SPTGRRIPCTPDFC 622
Score = 44.6 bits (91), Expect(4) = 3e-024
Identities = 24/41 (58%), Positives = 27/41 (65%)
Frame = +2 / +1
Query: 335 VFNLSITSQC*GSLTRRLVQGRVCCGLNNKSREVSQLLRT* 457
VFNL S * SL++R QGR G NN+ EVSQLLRT*
Sbjct: 421 VFNLFTISPW*DSLSKRSEQGRASRGSNNRLIEVSQLLRT* 543
Score = 43.7 bits (89), Expect(2) = 2e-053
Identities = 16/24 (66%), Positives = 19/24 (79%)
Frame = -2 / -3
Query: 537 DLGCKEYICQLDFISCCILPGASF 466
+LGCKEY+CQLDFIS LP +F
Sbjct: 617 NLGCKEYVCQLDFISHSKLPSTAF 546
Score = 40.9 bits (83), Expect(4) = 3e-024
Identities = 15/19 (78%), Positives = 16/19 (84%)
Frame = +2 / +1
Query: 479 GSMQQEMKSNWQMYSLHPR 535
GS+ EMKSNWQ YSLHPR
Sbjct: 559 GSLLWEMKSNWQTYSLHPR 615
Score = 36.3 bits (73), Expect(2) = 9e-040
Identities = 16/24 (66%), Positives = 18/24 (75%)
Frame = -1 / -2
Query: 538 RSGVQGIHLPVGLHLLLHTSRRIL 467
+SGVQGI LPVGLHL TS+ L
Sbjct: 618 KSGVQGIRLPVGLHLP*QTSQHSL 547
Score = 32.7 bits (65), Expect(4) = 3e-024
Identities = 16/22 (72%), Positives = 16/22 (72%)
Frame = +2 / +1
Query: 41 TRTGAARAPTVPASLSISKVWI 106
TRTGAA APT AS S SKV I
Sbjct: 127 TRTGAAPAPTASASRSTSKVSI 192
Score = 24.4 bits (47), Expect(3) = 3e-095
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +1 / +2
Query: 559 KIDMSNYPTLARLHSEYMSH 618
K DMS Y TLARL + H
Sbjct: 641 KSDMSKYXTLARLXRSVI*H 700
>gb|CA015021.1|CA015021 HT13A16r HT Hordeum vulgare subsp. vulgare cDNA clone HT13A16
5-PRIME, mRNA sequence
Length = 635
Score = 301 bits (651), Expect(2) = 1e-092
Identities = 123/154 (79%), Positives = 138/154 (89%)
Frame = +1 / +3
Query: 1 MAEVEATVGRLMLYSYWRSSCSHRARIALNLKGVDYEYKAVNLLKGEQSDPEFVKLNPMK 180
MA EA R +LYSYWRSSCSHR RIALNLKG+DYEYKAVNLLKGEQSDPEF+KLNPMK
Sbjct: 99 MASAEAPAARPILYSYWRSSCSHRVRIALNLKGIDYEYKAVNLLKGEQSDPEFMKLNPMK 278
Query: 181 FVPALVDGSSVIGDSYAITLYLEDKYPEPPLLPQDLQKKALNHQIASIVASGIQPLHNLT 360
FVPA V+G +VIGDSYAI LYLEDKYP+ PLLPQDL+KKALN QIASIV SGIQPLHNLT
Sbjct: 279 FVPAWVNGDAVIGDSYAIALYLEDKYPQRPLLPQDLEKKALNIQIASIVCSGIQPLHNLT 458
Query: 361 VLRFIDQKVGAGESVLWTQQQIERGFTAIENLIQ 462
++RFI+QKVG GES+ W QQQI+RGFTA+EN+I+
Sbjct: 459 LVRFIEQKVGTGESLPWVQQQIDRGFTAVENMIK 560
Score = 227 bits (491), Expect(2) = 3e-069
Identities = 107/152 (70%), Positives = 109/152 (71%)
Frame = -3 / -2
Query: 458 IRFSIAVKPLSICC*VHNTLSPAPTFWSMNLNTVRLWRG*IPEATMLAIW*FKAFFXXXX 279
I FS AVKPLSICC H LSP PTF SMNL VRL RG*IPE TMLAIW F+AFF
Sbjct: 556 IMFSTAVKPLSICCWTHGRLSPVPTFCSMNLTKVRL*RG*IPEHTMLAIWIFRAFFSRSW 377
Query: 278 XXXXXXGYLSSKYSVIA*ESPITELPSTNAGTNFIGLSLTNSGSDCSPLRRFTALYS*ST 99
GYLSSKY+ IA*ESPIT P T AGTNFIGLS NSGSDCSPLRR TALYS*S
Sbjct: 376 GKRGR*GYLSSKYNAIA*ESPITASPLTQAGTNFIGLSFMNSGSDCSPLRRLTALYS*SI 197
Query: 98 PLRLRAMRARWEHELRQYEYSISRPTVASTSA 3
PLRL AMR RWE ELRQYE I R AS A
Sbjct: 196 PLRLSAMRTRWEQELRQYE*RIGRAAGASAEA 101
Score = 186 bits (400), Expect(2) = 2e-053
Identities = 85/151 (56%), Positives = 104/151 (68%)
Frame = -2 / -1
Query: 453 VLNSCETSLDLLLSPQHTLPCTNLLVNEPQHCEVMERLNTRSYNACNLVIQSFXXXXXXX 274
VLNSCETS++LLL P+ LPC++LL+NE E+++RLNTR++NAC L IQ
Sbjct: 551 VLNSCETSINLLLDPREALPCSDLLLNESHQGEIVKRLNTRTHNACYLDIQGLLFKVLGQ 372
Query: 273 XXXXXXXXLQIQCYRVRVTYYRTAINQRRDELHRIKLDEFWIRLLALEKVHRLVLVIHTF 94
LQIQCY VRVT Y A++ RDELHRIKL E IRLLALE+V RLVL+I TF
Sbjct: 371 KRALRVLVLQIQCYCVRVTDYCVAVDPGRDELHRIKLHELGIRLLALEEVDRLVLIIDTF 192
Query: 93 EIESDAGTVGARAAPVRVQHQSPHRRLHLRH 1
E+E DA VGA AAPVRV+++ RRL H
Sbjct: 191 EVERDADAVGAGAAPVRVENRPRRRRLRRSH 99
Score = 171 bits (369), Expect(2) = 9e-050
Identities = 83/144 (57%), Positives = 94/144 (65%)
Frame = +3 / +2
Query: 27 ATDXXXXXXXXXXPPCPHRSQSQRCGLRVQGGEPSQGRAV*SRIRQA*SYEVRPCVG*WQ 206
A D PP PHR+Q QR L VQGG+P QGRAV*SR+ +A*SYEVRPC+G +
Sbjct: 125 AADSLLVLAQLLLPPRPHRAQPQRYRL*VQGGQPPQGRAV*SRVHEA*SYEVRPCLGQRR 304
Query: 207 FCNR*LLRDNTVFGGQVPRASSSTSRPSKESFESPDCKHCSFWYSTSP*PHSVEVH*PEG 386
NR*LLR++ VFGGQVP A S RP KE E PD KHC FWYSTS H E+H* +G
Sbjct: 305 RSNR*LLRNSIVFGGQVPSAPSFAPRP*KEGPEYPDSKHCVFWYSTSSQSHLGEIH*AKG 484
Query: 387 WCRGECVVDSTTNRERFHSY*EPD 458
RGE V TT+ RFHS *E D
Sbjct: 485 RNRGEPPVGPTTD**RFHSC*EHD 556
Score = 147 bits (316), Expect(2) = 9e-040
Identities = 79/131 (60%), Positives = 85/131 (64%)
Frame = -1 / -3
Query: 457 SGSQ*L*NLSRFVVESTTHSPLHQPSGQ*TSTL*GYGEVEYQKLQCLQSGDSKLSFEGLE 278
S SQ L*NL + VV T SPL +P Q* S * EVEYQ QCL SG S SF+GL
Sbjct: 555 SCSQQL*NLYQSVVGPTGGSPLFRPFAQ*ISPR*DCEEVEYQNTQCLLSGYSGPSFQGLG 376
Query: 277 VEEEALGTCPPNTVLSRKSHLLQNCHQPTQGRTS*D*A*RILDQTARP*EGSPPCTRNPH 98
+E A GTCPPNT+L RKSH L P QGRTS*D*A DQTARP* G PPCT N +
Sbjct: 375 AKEGAEGTCPPNTMLLRKSHRLLRRR*PRQGRTS*D*AS*TRDQTARP*GG*PPCTHNRY 196
Query: 97 L*D*ERCGHGG 65
L* * RCG GG
Sbjct: 195 L*G*ARCGRGG 163
Score = 59.7 bits (124), Expect(2) = 1e-092
Identities = 23/27 (85%), Positives = 26/27 (96%)
Frame = +1 / +3
Query: 463 LKGCAGKYATGDEVQLADVFLAPQIYA 543
+KGCAGK+A GDEVQLADVFLAPQI+A
Sbjct: 555 IKGCAGKFAMGDEVQLADVFLAPQIFA 635
Score = 54.7 bits (113), Expect(2) = 3e-069
Identities = 20/23 (86%), Positives = 21/23 (91%)
Frame = -3 / -2
Query: 536 IWGARNTSASWTSSPVAYFPAHP 468
IWGARNTSASWTSSP+A FPA P
Sbjct: 628 IWGARNTSASWTSSPIANFPAQP 560
Score = 48.3 bits (99), Expect(4) = 3e-024
Identities = 20/27 (74%), Positives = 22/27 (81%)
Frame = +2 / +1
Query: 218 VTLTR*HCIWRTSTQSLLFYLKTFKRK 298
VTLT+*HCIWRTST S LF KT KR+
Sbjct: 316 VTLTQ*HCIWRTSTLSALFCPKTLKRR 396
Score = 45.5 bits (93), Expect(2) = 9e-050
Identities = 18/26 (69%), Positives = 20/26 (76%)
Frame = +3 / +2
Query: 465 KRMRREVCNRR*SPTGRCIPCTPDLC 542
+R+ EVC R*SPTGR IPCTPD C
Sbjct: 557 QRLCWEVCYGR*SPTGRRIPCTPDFC 634
Score = 44.6 bits (91), Expect(4) = 3e-024
Identities = 24/41 (58%), Positives = 27/41 (65%)
Frame = +2 / +1
Query: 335 VFNLSITSQC*GSLTRRLVQGRVCCGLNNKSREVSQLLRT* 457
VFNL S * SL++R QGR G NN+ EVSQLLRT*
Sbjct: 433 VFNLFTISPW*DSLSKRSEQGRASRGSNNRLIEVSQLLRT* 555
Score = 43.7 bits (89), Expect(2) = 2e-053
Identities = 16/24 (66%), Positives = 19/24 (79%)
Frame = -2 / -1
Query: 537 DLGCKEYICQLDFISCCILPGASF 466
+LGCKEY+CQLDFIS LP +F
Sbjct: 629 NLGCKEYVCQLDFISHSKLPSTAF 558
Score = 40.9 bits (83), Expect(4) = 3e-024
Identities = 15/19 (78%), Positives = 16/19 (84%)
Frame = +2 / +1
Query: 479 GSMQQEMKSNWQMYSLHPR 535
GS+ EMKSNWQ YSLHPR
Sbjct: 571 GSLLWEMKSNWQTYSLHPR 627
Score = 36.3 bits (73), Expect(2) = 9e-040
Identities = 16/24 (66%), Positives = 18/24 (75%)
Frame = -1 / -3
Query: 538 RSGVQGIHLPVGLHLLLHTSRRIL 467
+SGVQGI LPVGLHL TS+ L
Sbjct: 630 KSGVQGIRLPVGLHLP*QTSQHSL 559
Score = 32.7 bits (65), Expect(4) = 3e-024
Identities = 16/22 (72%), Positives = 16/22 (72%)
Frame = +2 / +1
Query: 41 TRTGAARAPTVPASLSISKVWI 106
TRTGAA APT AS S SKV I
Sbjct: 139 TRTGAAPAPTASASRSTSKVSI 204
>gb|CA018640.1|CA018640 HV09D16r HV Hordeum vulgare subsp. vulgare cDNA clone HV09D16
5-PRIME, mRNA sequence
Length = 570
Score = 214 bits (461), Expect(2) = 7e-091
Identities = 87/109 (79%), Positives = 100/109 (91%)
Frame = +1 / +2
Query: 136 GEQSDPEFVKLNPMKFVPALVDGSSVIGDSYAITLYLEDKYPEPPLLPQDLQKKALNHQI 315
GEQSDPEF+KLNPMKFVPA V+G +VIGDSYAI LYLEDKYP+ PLLPQDL+KKALN QI
Sbjct: 2 GEQSDPEFMKLNPMKFVPAWVNGDAVIGDSYAIALYLEDKYPQRPLLPQDLEKKALNIQI 181
Query: 316 ASIVASGIQPLHNLTVLRFIDQKVGAGESVLWTQQQIERGFTAIENLIQ 462
ASIV SGIQPLHNLT++RFI+QKVG GES+ W QQQI+RGFTA+EN+I+
Sbjct: 182 ASIVCSGIQPLHNLTLVRFIEQKVGTGESLPWVQQQIDRGFTAVENMIK 328
Score = 164 bits (352), Expect(2) = 2e-069
Identities = 76/108 (70%), Positives = 78/108 (72%)
Frame = -3 / -1
Query: 458 IRFSIAVKPLSICC*VHNTLSPAPTFWSMNLNTVRLWRG*IPEATMLAIW*FKAFFXXXX 279
I FS AVKPLSICC H LSP PTF SMNL VRL RG*IPE TMLAIW F+AFF
Sbjct: 324 IMFSTAVKPLSICCWTHGRLSPVPTFCSMNLTKVRL*RG*IPEHTMLAIWIFRAFFSRSW 145
Query: 278 XXXXXXGYLSSKYSVIA*ESPITELPSTNAGTNFIGLSLTNSGSDCSP 135
GYLSSKY+ IA*ESPIT P T AGTNFIGLS NSGSDCSP
Sbjct: 144 GKRGR*GYLSSKYNAIA*ESPITASPLTQAGTNFIGLSFMNSGSDCSP 1
Score = 140 bits (301), Expect(2) = 7e-091
Identities = 56/71 (78%), Positives = 65/71 (91%)
Frame = +1 / +2
Query: 463 LKGCAGKYATGDEVQLADVFLAPQIYAAIERTKIDMSNYPTLARLHSEYMSHPAFEAALP 642
+KGCAGK+A GDEVQLADVFLAPQI+AA+ R +IDMS YPTLARLH +YM+HPAFEAALP
Sbjct: 323 IKGCAGKFAMGDEVQLADVFLAPQIFAAVTRFQIDMSKYPTLARLHDQYMTHPAFEAALP 502
Query: 643 GKQPDAPSSS* 675
+QPDAPSS+*
Sbjct: 503 DRQPDAPSSA* 535
Score = 136 bits (291), Expect(2) = 2e-048
Identities = 66/108 (61%), Positives = 75/108 (69%)
Frame = +3 / +1
Query: 135 GRAV*SRIRQA*SYEVRPCVG*WQFCNR*LLRDNTVFGGQVPRASSSTSRPSKESFESPD 314
GRAV*SR+ +A*SYEVRPC+G + NR*LLR++ VFGGQVP A S RP KE E PD
Sbjct: 1 GRAV*SRVHEA*SYEVRPCLGQRRRSNR*LLRNSIVFGGQVPSAPSFAPRP*KEGPEYPD 180
Query: 315 CKHCSFWYSTSP*PHSVEVH*PEGWCRGECVVDSTTNRERFHSY*EPD 458
KHC FWYSTS H E+H* +G RGE V TT+ RFHS *E D
Sbjct: 181 SKHCVFWYSTSSQSHLGEIH*AKGRNRGEPPVGPTTD**RFHSC*EHD 324
Score = 127 bits (272), Expect(2) = 2e-044
Identities = 58/106 (54%), Positives = 71/106 (66%)
Frame = -2 / -3
Query: 453 VLNSCETSLDLLLSPQHTLPCTNLLVNEPQHCEVMERLNTRSYNACNLVIQSFXXXXXXX 274
VLNSCETS++LLL P+ LPC++LL+NE E+++RLNTR++NAC L IQ
Sbjct: 319 VLNSCETSINLLLDPREALPCSDLLLNESHQGEIVKRLNTRTHNACYLDIQGLLFKVLGQ 140
Query: 273 XXXXXXXXLQIQCYRVRVTYYRTAINQRRDELHRIKLDEFWIRLLA 136
LQIQCY VRVT Y A++ RDELHRIKL E IRLLA
Sbjct: 139 KRALRVLVLQIQCYCVRVTDYCVAVDPGRDELHRIKLHELGIRLLA 2
Score = 118 bits (253), Expect(2) = 2e-069
Identities = 51/67 (76%), Positives = 54/67 (80%)
Frame = -3 / -1
Query: 668 DEGASGCLPGSAASNAGCDMYSEWSLARVG*FDMSILVRSMAA*IWGARNTSASWTSSPV 489
+EGASGC GSAASNAGC +Y WSLARVG FDMSI R AA IWGARNTSASWTSSP+
Sbjct: 528 EEGASGCRSGSAASNAGCVIY*SWSLARVGYFDMSI*KRVTAAKIWGARNTSASWTSSPI 349
Query: 488 AYFPAHP 468
A FPA P
Sbjct: 348 ANFPAQP 328
Score = 111 bits (238), Expect(2) = 2e-039
Identities = 63/107 (58%), Positives = 68/107 (63%)
Frame = -1 / -2
Query: 457 SGSQ*L*NLSRFVVESTTHSPLHQPSGQ*TSTL*GYGEVEYQKLQCLQSGDSKLSFEGLE 278
S SQ L*NL + VV T SPL +P Q* S * EVEYQ QCL SG S SF+GL
Sbjct: 323 SCSQQL*NLYQSVVGPTGGSPLFRPFAQ*ISPR*DCEEVEYQNTQCLLSGYSGPSFQGLG 144
Query: 277 VEEEALGTCPPNTVLSRKSHLLQNCHQPTQGRTS*D*A*RILDQTAR 137
+E A GTCPPNT+L RKSH L P QGRTS*D*A DQTAR
Sbjct: 143 AKEGAEGTCPPNTMLLRKSHRLLRRR*PRQGRTS*D*AS*TRDQTAR 3
Score = 77.1 bits (162), Expect(2) = 2e-048
Identities = 36/70 (51%), Positives = 44/70 (62%)
Frame = +3 / +1
Query: 465 KRMRREVCNRR*SPTGRCIPCTPDLCSH*TH*N*HVKLPHSC*APLGVHVTPCV*SSAPW 644
+R+ EVC R*SPTGR IPCTPD C + N HV++ H AP V+ TPC+*S AP
Sbjct: 325 QRLCWEVCYGR*SPTGRRIPCTPDFCCSDSFSNRHVEISHPREAPRSVYDTPCI*SCAP* 504
Query: 645 QATGRPFILL 674
A PF+ L
Sbjct: 505 PAARCPFLCL 534
Score = 73.9 bits (155), Expect(3) = 3e-029
Identities = 35/67 (52%), Positives = 40/67 (59%)
Frame = +2 / +3
Query: 479 GSMQQEMKSNWQMYSLHPRSMQPLNALKLTCQTTPLLLGSTRSTCHTLRLKQRSLASNRT 658
GS+ EMKSNWQ YSLHPR + K TC+ P GST S HTL LK RSL +
Sbjct: 339 GSLLWEMKSNWQTYSLHPRFLLQ*LVFKSTCRNIPPSRGSTISI*HTLHLKLRSLTGSPM 518
Query: 659 PLHPPRN 679
PL PR+
Sbjct: 519 PLPLPRH 539
Score = 72.1 bits (151), Expect(2) = 2e-044
Identities = 37/76 (48%), Positives = 44/76 (57%)
Frame = -1 / -2
Query: 694 TH*GAVPRRMKGRPVACQGALLQTQGVTCTPSGA*QEWGSLTCQF*CVQWLHRSGVQGIH 515
TH + R+ KG A QGA LQ QGV+ T GA + W TC+F +SGVQGI
Sbjct: 554 THPRPMSRQRKGHRAAGQGAQLQMQGVSYTDRGASRGWDISTCRFENESLQQKSGVQGIR 375
Query: 514 LPVGLHLLLHTSRRIL 467
LPVGLHL TS+ L
Sbjct: 374 LPVGLHLP*QTSQHSL 327
Score = 70.7 bits (148), Expect(2) = 2e-039
Identities = 30/58 (51%), Positives = 38/58 (65%)
Frame = -2 / -3
Query: 639 ERCFKRRV*HVLRVEPSKSGVV*HVNFSAFNGCIDLGCKEYICQLDFISCCILPGASF 466
ER FK RV H+L VEP + G+ HV+ + +LGCKEY+CQLDFIS LP +F
Sbjct: 499 ERSFKCRVCHILIVEPREGGIFRHVDLKTSHCSKNLGCKEYVCQLDFISHSKLPSTAF 326
Score = 48.3 bits (99), Expect(3) = 3e-029
Identities = 20/27 (74%), Positives = 22/27 (81%)
Frame = +2 / +3
Query: 218 VTLTR*HCIWRTSTQSLLFYLKTFKRK 298
VTLT+*HCIWRTST S LF KT KR+
Sbjct: 84 VTLTQ*HCIWRTSTLSALFCPKTLKRR 164
Score = 44.6 bits (91), Expect(3) = 3e-029
Identities = 24/41 (58%), Positives = 27/41 (65%)
Frame = +2 / +3
Query: 335 VFNLSITSQC*GSLTRRLVQGRVCCGLNNKSREVSQLLRT* 457
VFNL S * SL++R QGR G NN+ EVSQLLRT*
Sbjct: 201 VFNLFTISPW*DSLSKRSEQGRASRGSNNRLIEVSQLLRT* 323
>gb|BE215769.2|BE215769 HV_CEb0008H02f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0008H02f, mRNA sequence
Length = 519
Score = 303 bits (656), Expect(2) = 4e-089
Identities = 124/154 (80%), Positives = 138/154 (89%)
Frame = +1 / +1
Query: 1 MAEVEATVGRLMLYSYWRSSCSHRARIALNLKGVDYEYKAVNLLKGEQSDPEFVKLNPMK 180
MA EA R +LYSYWRSSCSHR RIALNLKG+DYEYKAVNLLKGEQSDPEF+KLNPMK
Sbjct: 4 MASAEAPAARPILYSYWRSSCSHRVRIALNLKGIDYEYKAVNLLKGEQSDPEFMKLNPMK 183
Query: 181 FVPALVDGSSVIGDSYAITLYLEDKYPEPPLLPQDLQKKALNHQIASIVASGIQPLHNLT 360
FVPA VDG +VIGDSYAI LYLEDKYP+ PLLPQDL+KKALN QIASIV SGIQPLHNLT
Sbjct: 184 FVPAWVDGDAVIGDSYAIALYLEDKYPQRPLLPQDLEKKALNIQIASIVCSGIQPLHNLT 363
Query: 361 VLRFIDQKVGAGESVLWTQQQIERGFTAIENLIQ 462
++RFI+QKVG GES+ W QQQI+RGFTA+EN+I+
Sbjct: 364 LVRFIEQKVGTGESLPWVQQQIDRGFTAVENMIK 465
Score = 230 bits (497), Expect(2) = 6e-066
Identities = 108/152 (71%), Positives = 110/152 (72%)
Frame = -3 / -2
Query: 458 IRFSIAVKPLSICC*VHNTLSPAPTFWSMNLNTVRLWRG*IPEATMLAIW*FKAFFXXXX 279
I FS AVKPLSICC H LSP PTF SMNL VRL RG*IPE TMLAIW F+AFF
Sbjct: 461 IMFSTAVKPLSICCWTHGRLSPVPTFCSMNLTKVRL*RG*IPEHTMLAIWIFRAFFSRSW 282
Query: 278 XXXXXXGYLSSKYSVIA*ESPITELPSTNAGTNFIGLSLTNSGSDCSPLRRFTALYS*ST 99
GYLSSKY+ IA*ESPIT PST AGTNFIGLS NSGSDCSPLRR TALYS*S
Sbjct: 281 GKRGR*GYLSSKYNAIA*ESPITASPSTQAGTNFIGLSFMNSGSDCSPLRRLTALYS*SM 102
Query: 98 PLRLRAMRARWEHELRQYEYSISRPTVASTSA 3
PLRL AMR RWE ELRQYE I R AS A
Sbjct: 101 PLRLSAMRTRWEQELRQYE*RIGRAAGASAEA 6
Score = 176 bits (378), Expect(2) = 5e-047
Identities = 81/151 (53%), Positives = 100/151 (66%)
Frame = -2 / -1
Query: 453 VLNSCETSLDLLLSPQHTLPCTNLLVNEPQHCEVMERLNTRSYNACNLVIQSFXXXXXXX 274
VLNSCETS++LLL P+ LPC++LL+NE E+++RLNTR++NAC L IQ
Sbjct: 456 VLNSCETSINLLLDPREALPCSDLLLNESHQGEIVKRLNTRTHNACYLDIQGLLFKVLGQ 277
Query: 273 XXXXXXXXLQIQCYRVRVTYYRTAINQRRDELHRIKLDEFWIRLLALEKVHRLVLVIHTF 94
LQIQCY V V Y ++ RDELHRIKL E IRLLALE+V RLVL+I F
Sbjct: 276 KRALRVLVLQIQCYCVGVADYCVPVDPGRDELHRIKLHELGIRLLALEEVDRLVLIIDAF 97
Query: 93 EIESDAGTVGARAAPVRVQHQSPHRRLHLRH 1
E+E DA VGA AAPVRV+++ RRL H
Sbjct: 96 EVERDADAVGAGAAPVRVENRPRRRRLRRSH 4
Score = 167 bits (360), Expect(2) = 3e-043
Identities = 82/144 (56%), Positives = 92/144 (63%)
Frame = +3 / +3
Query: 27 ATDXXXXXXXXXXPPCPHRSQSQRCGLRVQGGEPSQGRAV*SRIRQA*SYEVRPCVG*WQ 206
A D PP PHR+Q QR L VQGG+P QGRAV*SR+ +A*SYEVRPC+G
Sbjct: 30 AADSLLVLAQLLLPPRPHRAQPQRHRL*VQGGQPPQGRAV*SRVHEA*SYEVRPCLGRRG 209
Query: 207 FCNR*LLRDNTVFGGQVPRASSSTSRPSKESFESPDCKHCSFWYSTSP*PHSVEVH*PEG 386
NR LLR++ VFGGQVP A S RP KE E PD KHC FWYSTS H E+H* +G
Sbjct: 210 RSNRRLLRNSIVFGGQVPSAPSFAPRP*KEGPEYPDSKHCVFWYSTSSQSHLGEIH*AKG 389
Query: 387 WCRGECVVDSTTNRERFHSY*EPD 458
RGE V TT+ RFHS *E D
Sbjct: 390 RNRGEPPVGPTTD**RFHSC*EHD 461
Score = 142 bits (305), Expect(2) = 1e-034
Identities = 77/131 (58%), Positives = 84/131 (64%)
Frame = -1 / -3
Query: 457 SGSQ*L*NLSRFVVESTTHSPLHQPSGQ*TSTL*GYGEVEYQKLQCLQSGDSKLSFEGLE 278
S SQ L*NL + VV T SPL +P Q* S * EVEYQ QCL SG S SF+GL
Sbjct: 460 SCSQQL*NLYQSVVGPTGGSPLFRPFAQ*ISPR*DCEEVEYQNTQCLLSGYSGPSFQGLG 281
Query: 277 VEEEALGTCPPNTVLSRKSHLLQNCHQPTQGRTS*D*A*RILDQTARP*EGSPPCTRNPH 98
+E A GTCPPNT+L R+S L +P QGRTS*D*A DQTARP* G PPCT N
Sbjct: 280 AKEGAEGTCPPNTMLLRRSRRLLRPRRPRQGRTS*D*AS*TRDQTARP*GG*PPCTHNRC 101
Query: 97 L*D*ERCGHGG 65
L* * RCG GG
Sbjct: 100 L*G*ARCGRGG 68
Score = 45.5 bits (93), Expect(2) = 4e-089
Identities = 17/20 (85%), Positives = 19/20 (95%)
Frame = +1 / +1
Query: 463 LKGCAGKYATGDEVQLADVF 522
+KGCAGK+A GDEVQLADVF
Sbjct: 460 IKGCAGKFAMGDEVQLADVF 519
Score = 40.9 bits (83), Expect(2) = 6e-066
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = -3 / -2
Query: 521 NTSASWTSSPVAYFPAHP 468
NTSASWTSSP+A FPA P
Sbjct: 518 NTSASWTSSPIANFPAQP 465
Score = 32.2 bits (64), Expect(2) = 5e-047
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = -2 / -1
Query: 522 EYICQLDFISCCILPGASF 466
EY+CQLDFIS LP +F
Sbjct: 519 EYVCQLDFISHSKLPSTAF 463
Score = 28.1 bits (55), Expect(2) = 3e-043
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +2 / +2
Query: 479 GSMQQEMKSNWQMY 520
GS+ EMKSNWQ Y
Sbjct: 476 GSLLWEMKSNWQTY 517
Score = 24.0 bits (46), Expect(2) = 1e-034
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -1 / -3
Query: 520 IHLPVGLHLLLHTSRRIL 467
I LPVGLHL TS+ L
Sbjct: 517 IRLPVGLHLP*QTSQHSL 464
>gb|BJ549486.1|BJ549486 BJ549486 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags37m16 5', mRNA sequence
Length = 686
Score = 206 bits (445), Expect(2) = 1e-088
Identities = 84/106 (79%), Positives = 97/106 (91%)
Frame = +1 / +2
Query: 145 SDPEFVKLNPMKFVPALVDGSSVIGDSYAITLYLEDKYPEPPLLPQDLQKKALNHQIASI 324
SDPEF+KLNPMKFVPA V+G +VIGDSYAI LYLEDKYP+ PLLPQDL+KKALN QIASI
Sbjct: 23 SDPEFMKLNPMKFVPAWVNGDAVIGDSYAIALYLEDKYPQRPLLPQDLEKKALNIQIASI 202
Query: 325 VASGIQPLHNLTVLRFIDQKVGAGESVLWTQQQIERGFTAIENLIQ 462
V SGIQPLHNLT++RFI+QKVG GES+ W QQQI+RGFTA+EN+I+
Sbjct: 203 VCSGIQPLHNLTLVRFIEQKVGTGESLPWVQQQIDRGFTAVENMIK 340
Score = 155 bits (332), Expect(2) = 1e-066
Identities = 73/105 (69%), Positives = 75/105 (71%)
Frame = -3 / -3
Query: 458 IRFSIAVKPLSICC*VHNTLSPAPTFWSMNLNTVRLWRG*IPEATMLAIW*FKAFFXXXX 279
I FS AVKPLSICC H LSP PTF SMNL VRL RG*IPE TMLAIW F+AFF
Sbjct: 336 IMFSTAVKPLSICCWTHGRLSPVPTFCSMNLTKVRL*RG*IPEHTMLAIWIFRAFFSRSW 157
Query: 278 XXXXXXGYLSSKYSVIA*ESPITELPSTNAGTNFIGLSLTNSGSD 144
GYLSSKY+ IA*ESPIT P T AGTNFIGLS NSGSD
Sbjct: 156 GKRGR*GYLSSKYNAIA*ESPITASPLTQAGTNFIGLSFMNSGSD 22
Score = 140 bits (301), Expect(2) = 1e-088
Identities = 56/71 (78%), Positives = 65/71 (91%)
Frame = +1 / +2
Query: 463 LKGCAGKYATGDEVQLADVFLAPQIYAAIERTKIDMSNYPTLARLHSEYMSHPAFEAALP 642
+KGCAGK+A GDEVQLADVFLAPQI+AA+ R +IDMS YPTLARLH +YM+HPAFEAALP
Sbjct: 335 IKGCAGKFAMGDEVQLADVFLAPQIFAAVTRFQIDMSKYPTLARLHDQYMTHPAFEAALP 514
Query: 643 GKQPDAPSSS* 675
+QPDAPSS+*
Sbjct: 515 DRQPDAPSSA* 547
Score = 131 bits (280), Expect(2) = 5e-047
Identities = 64/108 (59%), Positives = 73/108 (67%)
Frame = +3 / +1
Query: 135 GRAV*SRIRQA*SYEVRPCVG*WQFCNR*LLRDNTVFGGQVPRASSSTSRPSKESFESPD 314
G V*SR+ +A*SYEVRPC+G + NR*LLR++ VFGGQVP A S RP KE E PD
Sbjct: 13 GTRV*SRVHEA*SYEVRPCLGQRRRSNR*LLRNSIVFGGQVPSAPSFAPRP*KEGPEYPD 192
Query: 315 CKHCSFWYSTSP*PHSVEVH*PEGWCRGECVVDSTTNRERFHSY*EPD 458
KHC FWYSTS H E+H* +G RGE V TT+ RFHS *E D
Sbjct: 193 SKHCVFWYSTSSQSHLGEIH*AKGRNRGEPPVGPTTD**RFHSC*EHD 336
Score = 122 bits (260), Expect(2) = 9e-043
Identities = 55/103 (53%), Positives = 68/103 (66%)
Frame = -2 / -2
Query: 453 VLNSCETSLDLLLSPQHTLPCTNLLVNEPQHCEVMERLNTRSYNACNLVIQSFXXXXXXX 274
VLNSCETS++LLL P+ LPC++LL+NE E+++RLNTR++NAC L IQ
Sbjct: 331 VLNSCETSINLLLDPREALPCSDLLLNESHQGEIVKRLNTRTHNACYLDIQGLLFKVLGQ 152
Query: 273 XXXXXXXXLQIQCYRVRVTYYRTAINQRRDELHRIKLDEFWIR 145
LQIQCY VRVT Y A++ RDELHRIKL E IR
Sbjct: 151 KRALRVLVLQIQCYCVRVTDYCVAVDPGRDELHRIKLHELGIR 23
Score = 118 bits (253), Expect(2) = 1e-066
Identities = 51/67 (76%), Positives = 54/67 (80%)
Frame = -3 / -3
Query: 668 DEGASGCLPGSAASNAGCDMYSEWSLARVG*FDMSILVRSMAA*IWGARNTSASWTSSPV 489
+EGASGC GSAASNAGC +Y WSLARVG FDMSI R AA IWGARNTSASWTSSP+
Sbjct: 540 EEGASGCRSGSAASNAGCVIY*SWSLARVGYFDMSI*KRVTAAKIWGARNTSASWTSSPI 361
Query: 488 AYFPAHP 468
A FPA P
Sbjct: 360 ANFPAQP 340
Score = 109 bits (232), Expect(2) = 2e-038
Identities = 62/108 (57%), Positives = 67/108 (62%)
Frame = -1 / -1
Query: 457 SGSQ*L*NLSRFVVESTTHSPLHQPSGQ*TSTL*GYGEVEYQKLQCLQSGDSKLSFEGLE 278
S SQ L*NL + VV T SPL +P Q* S * EVEYQ QCL SG S SF+GL
Sbjct: 335 SCSQQL*NLYQSVVGPTGGSPLFRPFAQ*ISPR*DCEEVEYQNTQCLLSGYSGPSFQGLG 156
Query: 277 VEEEALGTCPPNTVLSRKSHLLQNCHQPTQGRTS*D*A*RILDQTARP 134
+E A GTCPPNT+L RKSH L P QGRTS*D*A DQT P
Sbjct: 155 AKEGAEGTCPPNTMLLRKSHRLLRRR*PRQGRTS*D*AS*TRDQTLVP 12
Score = 77.1 bits (162), Expect(2) = 5e-047
Identities = 36/70 (51%), Positives = 44/70 (62%)
Frame = +3 / +1
Query: 465 KRMRREVCNRR*SPTGRCIPCTPDLCSH*TH*N*HVKLPHSC*APLGVHVTPCV*SSAPW 644
+R+ EVC R*SPTGR IPCTPD C + N HV++ H AP V+ TPC+*S AP
Sbjct: 337 QRLCWEVCYGR*SPTGRRIPCTPDFCCSDSFSNRHVEISHPREAPRSVYDTPCI*SCAP* 516
Query: 645 QATGRPFILL 674
A PF+ L
Sbjct: 517 PAARCPFLCL 546
Score = 73.9 bits (155), Expect(3) = 3e-029
Identities = 35/67 (52%), Positives = 40/67 (59%)
Frame = +2 / +3
Query: 479 GSMQQEMKSNWQMYSLHPRSMQPLNALKLTCQTTPLLLGSTRSTCHTLRLKQRSLASNRT 658
GS+ EMKSNWQ YSLHPR + K TC+ P GST S HTL LK RSL +
Sbjct: 351 GSLLWEMKSNWQTYSLHPRFLLQ*LVFKSTCRNIPPSRGSTISI*HTLHLKLRSLTGSPM 530
Query: 659 PLHPPRN 679
PL PR+
Sbjct: 531 PLPLPRH 551
Score = 72.1 bits (151), Expect(2) = 9e-043
Identities = 37/76 (48%), Positives = 44/76 (57%)
Frame = -1 / -1
Query: 694 TH*GAVPRRMKGRPVACQGALLQTQGVTCTPSGA*QEWGSLTCQF*CVQWLHRSGVQGIH 515
TH + R+ KG A QGA LQ QGV+ T GA + W TC+F +SGVQGI
Sbjct: 566 THPRPMSRQRKGHRAAGQGAQLQMQGVSYTDRGASRGWDISTCRFENESLQQKSGVQGIR 387
Query: 514 LPVGLHLLLHTSRRIL 467
LPVGLHL TS+ L
Sbjct: 386 LPVGLHLP*QTSQHSL 339
Score = 70.7 bits (148), Expect(2) = 2e-038
Identities = 30/58 (51%), Positives = 38/58 (65%)
Frame = -2 / -2
Query: 639 ERCFKRRV*HVLRVEPSKSGVV*HVNFSAFNGCIDLGCKEYICQLDFISCCILPGASF 466
ER FK RV H+L VEP + G+ HV+ + +LGCKEY+CQLDFIS LP +F
Sbjct: 511 ERSFKCRVCHILIVEPREGGIFRHVDLKTSHCSKNLGCKEYVCQLDFISHSKLPSTAF 338
Score = 48.3 bits (99), Expect(3) = 3e-029
Identities = 20/27 (74%), Positives = 22/27 (81%)
Frame = +2 / +3
Query: 218 VTLTR*HCIWRTSTQSLLFYLKTFKRK 298
VTLT+*HCIWRTST S LF KT KR+
Sbjct: 96 VTLTQ*HCIWRTSTLSALFCPKTLKRR 176
Score = 44.6 bits (91), Expect(3) = 3e-029
Identities = 24/41 (58%), Positives = 27/41 (65%)
Frame = +2 / +3
Query: 335 VFNLSITSQC*GSLTRRLVQGRVCCGLNNKSREVSQLLRT* 457
VFNL S * SL++R QGR G NN+ EVSQLLRT*
Sbjct: 213 VFNLFTISPW*DSLSKRSEQGRASRGSNNRLIEVSQLLRT* 335
>gb|BM370565.2|BM370565 EBro08_SQ004_J19_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ004_J19 5', mRNA sequence
Length = 679
Score = 193 bits (416), Expect(2) = 1e-084
Identities = 79/99 (79%), Positives = 90/99 (90%)
Frame = +1 / +2
Query: 166 LNPMKFVPALVDGSSVIGDSYAITLYLEDKYPEPPLLPQDLQKKALNHQIASIVASGIQP 345
LNPMKFVPA VDG +VIGDSYAI LYLEDKYP+ PLLPQDL+KKALN QIASIV SGIQP
Sbjct: 2 LNPMKFVPAWVDGDAVIGDSYAIALYLEDKYPQRPLLPQDLEKKALNIQIASIVCSGIQP 181
Query: 346 LHNLTVLRFIDQKVGAGESVLWTQQQIERGFTAIENLIQ 462
LHNLT++RFI+QKVG GES+ W QQQI+RGFTA+EN+I+
Sbjct: 182 LHNLTLVRFIEQKVGTGESLPWVQQQIDRGFTAVENMIK 298
Score = 146 bits (313), Expect(2) = 5e-064
Identities = 69/98 (70%), Positives = 71/98 (72%)
Frame = -3 / -2
Query: 458 IRFSIAVKPLSICC*VHNTLSPAPTFWSMNLNTVRLWRG*IPEATMLAIW*FKAFFXXXX 279
I FS AVKPLSICC H LSP PTF SMNL VRL RG*IPE TMLAIW F+AFF
Sbjct: 294 IMFSTAVKPLSICCWTHGRLSPVPTFCSMNLTKVRL*RG*IPEHTMLAIWIFRAFFSRSW 115
Query: 278 XXXXXXGYLSSKYSVIA*ESPITELPSTNAGTNFIGLS 165
GYLSSKY+ IA*ESPIT PST AGTNFIGLS
Sbjct: 114 GKRGR*GYLSSKYNAIA*ESPITASPSTQAGTNFIGLS 1
Score = 140 bits (301), Expect(2) = 1e-084
Identities = 56/71 (78%), Positives = 65/71 (91%)
Frame = +1 / +2
Query: 463 LKGCAGKYATGDEVQLADVFLAPQIYAAIERTKIDMSNYPTLARLHSEYMSHPAFEAALP 642
+KGCAGK+A GDEVQLADVFLAPQI+AA+ R +IDMS YPTLARLH +YM+HPAFEAALP
Sbjct: 293 IKGCAGKFAMGDEVQLADVFLAPQIFAAVTRFQIDMSKYPTLARLHDQYMTHPAFEAALP 472
Query: 643 GKQPDAPSSS* 675
+QPDAPSS+*
Sbjct: 473 DRQPDAPSSA* 505
Score = 120 bits (257), Expect(2) = 7e-044
Identities = 59/98 (60%), Positives = 66/98 (67%)
Frame = +3 / +1
Query: 165 A*SYEVRPCVG*WQFCNR*LLRDNTVFGGQVPRASSSTSRPSKESFESPDCKHCSFWYST 344
A*SYEVRPC+G + NR*LLR++ VFGGQVP A S RP KE E PD KHC FWYST
Sbjct: 1 A*SYEVRPCLGRRRRSNR*LLRNSIVFGGQVPSAPSFAPRP*KEGPEYPDSKHCVFWYST 180
Query: 345 SP*PHSVEVH*PEGWCRGECVVDSTTNRERFHSY*EPD 458
S H E+H* +G RGE V TT+ RFHS *E D
Sbjct: 181 SSQSHLGEIH*AKGRNRGEPPVGPTTD**RFHSC*EHD 294
Score = 118 bits (253), Expect(2) = 5e-064
Identities = 51/67 (76%), Positives = 54/67 (80%)
Frame = -3 / -2
Query: 668 DEGASGCLPGSAASNAGCDMYSEWSLARVG*FDMSILVRSMAA*IWGARNTSASWTSSPV 489
+EGASGC GSAASNAGC +Y WSLARVG FDMSI R AA IWGARNTSASWTSSP+
Sbjct: 498 EEGASGCRSGSAASNAGCVIY*SWSLARVGYFDMSI*KRVTAAKIWGARNTSASWTSSPI 319
Query: 488 AYFPAHP 468
A FPA P
Sbjct: 318 ANFPAQP 298
Score = 115 bits (245), Expect(2) = 1e-040
Identities = 51/96 (53%), Positives = 64/96 (66%)
Frame = -2 / -1
Query: 453 VLNSCETSLDLLLSPQHTLPCTNLLVNEPQHCEVMERLNTRSYNACNLVIQSFXXXXXXX 274
VLNSCETS++LLL P+ LPC++LL+NE E+++RLNTR++NAC L IQ
Sbjct: 289 VLNSCETSINLLLDPREALPCSDLLLNESHQGEIVKRLNTRTHNACYLDIQGLLFKVLGQ 110
Query: 273 XXXXXXXXLQIQCYRVRVTYYRTAINQRRDELHRIK 166
LQIQCY VRVT Y A++ RDELHRIK
Sbjct: 109 KRALRVLVLQIQCYCVRVTDYCVAVDPGRDELHRIK 2
Score = 105 bits (225), Expect(2) = 1e-037
Identities = 57/97 (58%), Positives = 63/97 (64%)
Frame = -1 / -3
Query: 457 SGSQ*L*NLSRFVVESTTHSPLHQPSGQ*TSTL*GYGEVEYQKLQCLQSGDSKLSFEGLE 278
S SQ L*NL + VV T SPL +P Q* S * EVEYQ QCL SG S SF+GL
Sbjct: 293 SCSQQL*NLYQSVVGPTGGSPLFRPFAQ*ISPR*DCEEVEYQNTQCLLSGYSGPSFQGLG 114
Query: 277 VEEEALGTCPPNTVLSRKSHLLQNCHQPTQGRTS*D* 167
+E A GTCPPNT+L RKSH L +P QGRTS*D*
Sbjct: 113 AKEGAEGTCPPNTMLLRKSHRLLRRRRPRQGRTS*D* 3
Score = 77.1 bits (162), Expect(2) = 7e-044
Identities = 36/70 (51%), Positives = 44/70 (62%)
Frame = +3 / +1
Query: 465 KRMRREVCNRR*SPTGRCIPCTPDLCSH*TH*N*HVKLPHSC*APLGVHVTPCV*SSAPW 644
+R+ EVC R*SPTGR IPCTPD C + N HV++ H AP V+ TPC+*S AP
Sbjct: 295 QRLCWEVCYGR*SPTGRRIPCTPDFCCSDSFSNRHVEISHPREAPRSVYDTPCI*SCAP* 474
Query: 645 QATGRPFILL 674
A PF+ L
Sbjct: 475 PAARCPFLCL 504
Score = 73.9 bits (155), Expect(3) = 3e-029
Identities = 35/67 (52%), Positives = 40/67 (59%)
Frame = +2 / +3
Query: 479 GSMQQEMKSNWQMYSLHPRSMQPLNALKLTCQTTPLLLGSTRSTCHTLRLKQRSLASNRT 658
GS+ EMKSNWQ YSLHPR + K TC+ P GST S HTL LK RSL +
Sbjct: 309 GSLLWEMKSNWQTYSLHPRFLLQ*LVFKSTCRNIPPSRGSTISI*HTLHLKLRSLTGSPM 488
Query: 659 PLHPPRN 679
PL PR+
Sbjct: 489 PLPLPRH 509
Score = 72.1 bits (151), Expect(2) = 1e-040
Identities = 37/76 (48%), Positives = 44/76 (57%)
Frame = -1 / -3
Query: 694 TH*GAVPRRMKGRPVACQGALLQTQGVTCTPSGA*QEWGSLTCQF*CVQWLHRSGVQGIH 515
TH + R+ KG A QGA LQ QGV+ T GA + W TC+F +SGVQGI
Sbjct: 524 THPRPMSRQRKGHRAAGQGAQLQMQGVSYTDRGASRGWDISTCRFENESLQQKSGVQGIR 345
Query: 514 LPVGLHLLLHTSRRIL 467
LPVGLHL TS+ L
Sbjct: 344 LPVGLHLP*QTSQHSL 297
Score = 70.7 bits (148), Expect(2) = 1e-037
Identities = 30/58 (51%), Positives = 38/58 (65%)
Frame = -2 / -1
Query: 639 ERCFKRRV*HVLRVEPSKSGVV*HVNFSAFNGCIDLGCKEYICQLDFISCCILPGASF 466
ER FK RV H+L VEP + G+ HV+ + +LGCKEY+CQLDFIS LP +F
Sbjct: 469 ERSFKCRVCHILIVEPREGGIFRHVDLKTSHCSKNLGCKEYVCQLDFISHSKLPSTAF 296
Score = 48.3 bits (99), Expect(3) = 3e-029
Identities = 20/27 (74%), Positives = 22/27 (81%)
Frame = +2 / +3
Query: 218 VTLTR*HCIWRTSTQSLLFYLKTFKRK 298
VTLT+*HCIWRTST S LF KT KR+
Sbjct: 54 VTLTQ*HCIWRTSTLSALFCPKTLKRR 134
Score = 44.6 bits (91), Expect(3) = 3e-029
Identities = 24/41 (58%), Positives = 27/41 (65%)
Frame = +2 / +3
Query: 335 VFNLSITSQC*GSLTRRLVQGRVCCGLNNKSREVSQLLRT* 457
VFNL S * SL++R QGR G NN+ EVSQLLRT*
Sbjct: 171 VFNLFTISPW*DSLSKRSEQGRASRGSNNRLIEVSQLLRT* 293
>gb|BU988530.1|BU988530 HF17O12r HF Hordeum vulgare subsp. vulgare cDNA clone HF17O12
5-PRIME, mRNA sequence
Length = 497
Score = 216 bits (466), Expect(2) = 5e-084
Identities = 88/110 (80%), Positives = 101/110 (91%)
Frame = +1 / +2
Query: 133 KGEQSDPEFVKLNPMKFVPALVDGSSVIGDSYAITLYLEDKYPEPPLLPQDLQKKALNHQ 312
KGEQSDPEF+KLNPMKFVPA V+G +VIGDSYAI LYLEDKYP+ PLLPQDL+KKALN Q
Sbjct: 2 KGEQSDPEFMKLNPMKFVPAWVNGDAVIGDSYAIALYLEDKYPQRPLLPQDLEKKALNIQ 181
Query: 313 IASIVASGIQPLHNLTVLRFIDQKVGAGESVLWTQQQIERGFTAIENLIQ 462
IASIV SGIQPLHNLT++RFI+QKVG GES+ W QQQI+RGFTA+EN+I+
Sbjct: 182 IASIVCSGIQPLHNLTLVRFIEQKVGTGESLPWVQQQIDRGFTAVENMIK 331
Score = 166 bits (356), Expect(2) = 2e-063
Identities = 77/109 (70%), Positives = 79/109 (72%)
Frame = -3 / -3
Query: 458 IRFSIAVKPLSICC*VHNTLSPAPTFWSMNLNTVRLWRG*IPEATMLAIW*FKAFFXXXX 279
I FS AVKPLSICC H LSP PTF SMNL VRL RG*IPE TMLAIW F+AFF
Sbjct: 327 IMFSTAVKPLSICCWTHGRLSPVPTFCSMNLTKVRL*RG*IPEHTMLAIWIFRAFFSRSW 148
Query: 278 XXXXXXGYLSSKYSVIA*ESPITELPSTNAGTNFIGLSLTNSGSDCSPL 132
GYLSSKY+ IA*ESPIT P T AGTNFIGLS NSGSDCSPL
Sbjct: 147 GKRGR*GYLSSKYNAIA*ESPITASPLTQAGTNFIGLSFMNSGSDCSPL 1
Score = 138 bits (296), Expect(2) = 3e-046
Identities = 67/109 (61%), Positives = 76/109 (69%)
Frame = +3 / +1
Query: 132 QGRAV*SRIRQA*SYEVRPCVG*WQFCNR*LLRDNTVFGGQVPRASSSTSRPSKESFESP 311
QGRAV*SR+ +A*SYEVRPC+G + NR*LLR++ VFGGQVP A S RP KE E P
Sbjct: 1 QGRAV*SRVHEA*SYEVRPCLGQRRRSNR*LLRNSIVFGGQVPSAPSFAPRP*KEGPEYP 180
Query: 312 DCKHCSFWYSTSP*PHSVEVH*PEGWCRGECVVDSTTNRERFHSY*EPD 458
D KHC FWYSTS H E+H* +G RGE V TT+ RFHS *E D
Sbjct: 181 DSKHCVFWYSTSSQSHLGEIH*AKGRNRGEPPVGPTTD**RFHSC*EHD 327
Score = 129 bits (276), Expect(2) = 3e-043
Identities = 59/107 (55%), Positives = 72/107 (67%)
Frame = -2 / -2
Query: 453 VLNSCETSLDLLLSPQHTLPCTNLLVNEPQHCEVMERLNTRSYNACNLVIQSFXXXXXXX 274
VLNSCETS++LLL P+ LPC++LL+NE E+++RLNTR++NAC L IQ
Sbjct: 322 VLNSCETSINLLLDPREALPCSDLLLNESHQGEIVKRLNTRTHNACYLDIQGLLFKVLGQ 143
Query: 273 XXXXXXXXLQIQCYRVRVTYYRTAINQRRDELHRIKLDEFWIRLLAL 133
LQIQCY VRVT Y A++ RDELHRIKL E IRLLAL
Sbjct: 142 KRALRVLVLQIQCYCVRVTDYCVAVDPGRDELHRIKLHELGIRLLAL 2
Score = 115 bits (246), Expect(2) = 5e-084
Identities = 45/57 (78%), Positives = 52/57 (91%)
Frame = +1 / +2
Query: 463 LKGCAGKYATGDEVQLADVFLAPQIYAAIERTKIDMSNYPTLARLHSEYMSHPAFEA 633
+KGCAGK+A GDEVQLADVFLAPQI+AA+ R +IDMS YPTLARLH +YM+HPAFEA
Sbjct: 326 IKGCAGKFAMGDEVQLADVFLAPQIFAAVTRFQIDMSKYPTLARLHDQYMTHPAFEA 496
Score = 115 bits (245), Expect(2) = 4e-036
Identities = 64/108 (59%), Positives = 69/108 (63%)
Frame = -1 / -1
Query: 457 SGSQ*L*NLSRFVVESTTHSPLHQPSGQ*TSTL*GYGEVEYQKLQCLQSGDSKLSFEGLE 278
S SQ L*NL + VV T SPL +P Q* S * EVEYQ QCL SG S SF+GL
Sbjct: 326 SCSQQL*NLYQSVVGPTGGSPLFRPFAQ*ISPR*DCEEVEYQNTQCLLSGYSGPSFQGLG 147
Query: 277 VEEEALGTCPPNTVLSRKSHLLQNCHQPTQGRTS*D*A*RILDQTARP 134
+E A GTCPPNT+L RKSH L P QGRTS*D*A DQTARP
Sbjct: 146 AKEGAEGTCPPNTMLLRKSHRLLRRR*PRQGRTS*D*AS*TRDQTARP 3
Score = 97.3 bits (206), Expect(2) = 2e-063
Identities = 42/55 (76%), Positives = 44/55 (80%)
Frame = -3 / -3
Query: 632 ASNAGCDMYSEWSLARVG*FDMSILVRSMAA*IWGARNTSASWTSSPVAYFPAHP 468
ASNAGC +Y WSLARVG FDMSI R AA IWGARNTSASWTSSP+A FPA P
Sbjct: 495 ASNAGCVIY*SWSLARVGYFDMSI*KRVTAAKIWGARNTSASWTSSPIANFPAQP 331
Score = 67.0 bits (140), Expect(2) = 3e-046
Identities = 30/56 (53%), Positives = 37/56 (66%)
Frame = +3 / +1
Query: 465 KRMRREVCNRR*SPTGRCIPCTPDLCSH*TH*N*HVKLPHSC*APLGVHVTPCV*S 632
+R+ EVC R*SPTGR IPCTPD C + N HV++ H AP V+ TPC+*S
Sbjct: 328 QRLCWEVCYGR*SPTGRRIPCTPDFCCSDSFSNRHVEISHPREAPRSVYDTPCI*S 495
Score = 66.6 bits (139), Expect(2) = 3e-043
Identities = 28/55 (50%), Positives = 36/55 (65%)
Frame = -2 / -2
Query: 630 FKRRV*HVLRVEPSKSGVV*HVNFSAFNGCIDLGCKEYICQLDFISCCILPGASF 466
FK RV H+L VEP + G+ HV+ + +LGCKEY+CQLDFIS LP +F
Sbjct: 493 FKCRVCHILIVEPREGGIFRHVDLKTSHCSKNLGCKEYVCQLDFISHSKLPSTAF 329
Score = 61.1 bits (127), Expect(3) = 1e-025
Identities = 28/51 (54%), Positives = 31/51 (60%)
Frame = +2 / +3
Query: 479 GSMQQEMKSNWQMYSLHPRSMQPLNALKLTCQTTPLLLGSTRSTCHTLRLK 631
GS+ EMKSNWQ YSLHPR + K TC+ P GST S HTL LK
Sbjct: 342 GSLLWEMKSNWQTYSLHPRFLLQ*LVFKSTCRNIPPSRGSTISI*HTLHLK 494
Score = 56.5 bits (117), Expect(2) = 4e-036
Identities = 28/55 (50%), Positives = 33/55 (60%)
Frame = -1 / -1
Query: 631 LQTQGVTCTPSGA*QEWGSLTCQF*CVQWLHRSGVQGIHLPVGLHLLLHTSRRIL 467
LQ QGV+ T GA + W TC+F +SGVQGI LPVGLHL TS+ L
Sbjct: 494 LQMQGVSYTDRGASRGWDISTCRFENESLQQKSGVQGIRLPVGLHLP*QTSQHSL 330
Score = 48.3 bits (99), Expect(3) = 1e-025
Identities = 20/27 (74%), Positives = 22/27 (81%)
Frame = +2 / +3
Query: 218 VTLTR*HCIWRTSTQSLLFYLKTFKRK 298
VTLT+*HCIWRTST S LF KT KR+
Sbjct: 87 VTLTQ*HCIWRTSTLSALFCPKTLKRR 167
Score = 44.6 bits (91), Expect(3) = 1e-025
Identities = 24/41 (58%), Positives = 27/41 (65%)
Frame = +2 / +3
Query: 335 VFNLSITSQC*GSLTRRLVQGRVCCGLNNKSREVSQLLRT* 457
VFNL S * SL++R QGR G NN+ EVSQLLRT*
Sbjct: 204 VFNLFTISPW*DSLSKRSEQGRASRGSNNRLIEVSQLLRT* 326
>gb|BU989028.1|BU989028 HF19I13r HF Hordeum vulgare subsp. vulgare cDNA clone HF19I13
5-PRIME, mRNA sequence
Length = 495
Score = 214 bits (461), Expect(2) = 2e-083
Identities = 87/109 (79%), Positives = 100/109 (91%)
Frame = +1 / +2
Query: 136 GEQSDPEFVKLNPMKFVPALVDGSSVIGDSYAITLYLEDKYPEPPLLPQDLQKKALNHQI 315
GEQSDPEF+KLNPMKFVPA V+G +VIGDSYAI LYLEDKYP+ PLLPQDL+KKALN QI
Sbjct: 2 GEQSDPEFMKLNPMKFVPAWVNGDAVIGDSYAIALYLEDKYPQRPLLPQDLEKKALNIQI 181
Query: 316 ASIVASGIQPLHNLTVLRFIDQKVGAGESVLWTQQQIERGFTAIENLIQ 462
ASIV SGIQPLHNLT++RFI+QKVG GES+ W QQQI+RGFTA+EN+I+
Sbjct: 182 ASIVCSGIQPLHNLTLVRFIEQKVGTGESLPWVQQQIDRGFTAVENMIK 328
Score = 164 bits (352), Expect(2) = 2e-063
Identities = 76/108 (70%), Positives = 78/108 (72%)
Frame = -3 / -1
Query: 458 IRFSIAVKPLSICC*VHNTLSPAPTFWSMNLNTVRLWRG*IPEATMLAIW*FKAFFXXXX 279
I FS AVKPLSICC H LSP PTF SMNL VRL RG*IPE TMLAIW F+AFF
Sbjct: 324 IMFSTAVKPLSICCWTHGRLSPVPTFCSMNLTKVRL*RG*IPEHTMLAIWIFRAFFSRSW 145
Query: 278 XXXXXXGYLSSKYSVIA*ESPITELPSTNAGTNFIGLSLTNSGSDCSP 135
GYLSSKY+ IA*ESPIT P T AGTNFIGLS NSGSDCSP
Sbjct: 144 GKRGR*GYLSSKYNAIA*ESPITASPLTQAGTNFIGLSFMNSGSDCSP 1
Score = 136 bits (291), Expect(2) = 2e-045
Identities = 66/108 (61%), Positives = 75/108 (69%)
Frame = +3 / +1
Query: 135 GRAV*SRIRQA*SYEVRPCVG*WQFCNR*LLRDNTVFGGQVPRASSSTSRPSKESFESPD 314
GRAV*SR+ +A*SYEVRPC+G + NR*LLR++ VFGGQVP A S RP KE E PD
Sbjct: 1 GRAV*SRVHEA*SYEVRPCLGQRRRSNR*LLRNSIVFGGQVPSAPSFAPRP*KEGPEYPD 180
Query: 315 CKHCSFWYSTSP*PHSVEVH*PEGWCRGECVVDSTTNRERFHSY*EPD 458
KHC FWYSTS H E+H* +G RGE V TT+ RFHS *E D
Sbjct: 181 SKHCVFWYSTSSQSHLGEIH*AKGRNRGEPPVGPTTD**RFHSC*EHD 324
Score = 127 bits (272), Expect(2) = 9e-043
Identities = 58/106 (54%), Positives = 71/106 (66%)
Frame = -2 / -3
Query: 453 VLNSCETSLDLLLSPQHTLPCTNLLVNEPQHCEVMERLNTRSYNACNLVIQSFXXXXXXX 274
VLNSCETS++LLL P+ LPC++LL+NE E+++RLNTR++NAC L IQ
Sbjct: 319 VLNSCETSINLLLDPREALPCSDLLLNESHQGEIVKRLNTRTHNACYLDIQGLLFKVLGQ 140
Query: 273 XXXXXXXXLQIQCYRVRVTYYRTAINQRRDELHRIKLDEFWIRLLA 136
LQIQCY VRVT Y A++ RDELHRIKL E IRLLA
Sbjct: 139 KRALRVLVLQIQCYCVRVTDYCVAVDPGRDELHRIKLHELGIRLLA 2
Score = 115 bits (246), Expect(2) = 2e-083
Identities = 45/57 (78%), Positives = 52/57 (91%)
Frame = +1 / +2
Query: 463 LKGCAGKYATGDEVQLADVFLAPQIYAAIERTKIDMSNYPTLARLHSEYMSHPAFEA 633
+KGCAGK+A GDEVQLADVFLAPQI+AA+ R +IDMS YPTLARLH +YM+HPAFEA
Sbjct: 323 IKGCAGKFAMGDEVQLADVFLAPQIFAAVTRFQIDMSKYPTLARLHDQYMTHPAFEA 493
Score = 111 bits (238), Expect(2) = 4e-035
Identities = 63/107 (58%), Positives = 68/107 (63%)
Frame = -1 / -2
Query: 457 SGSQ*L*NLSRFVVESTTHSPLHQPSGQ*TSTL*GYGEVEYQKLQCLQSGDSKLSFEGLE 278
S SQ L*NL + VV T SPL +P Q* S * EVEYQ QCL SG S SF+GL
Sbjct: 323 SCSQQL*NLYQSVVGPTGGSPLFRPFAQ*ISPR*DCEEVEYQNTQCLLSGYSGPSFQGLG 144
Query: 277 VEEEALGTCPPNTVLSRKSHLLQNCHQPTQGRTS*D*A*RILDQTAR 137
+E A GTCPPNT+L RKSH L P QGRTS*D*A DQTAR
Sbjct: 143 AKEGAEGTCPPNTMLLRKSHRLLRRR*PRQGRTS*D*AS*TRDQTAR 3
Score = 99.1 bits (210), Expect(2) = 2e-063
Identities = 43/56 (76%), Positives = 45/56 (80%)
Frame = -3 / -1
Query: 635 AASNAGCDMYSEWSLARVG*FDMSILVRSMAA*IWGARNTSASWTSSPVAYFPAHP 468
AASNAGC +Y WSLARVG FDMSI R AA IWGARNTSASWTSSP+A FPA P
Sbjct: 495 AASNAGCVIY*SWSLARVGYFDMSI*KRVTAAKIWGARNTSASWTSSPIANFPAQP 328
Score = 67.0 bits (140), Expect(2) = 2e-045
Identities = 30/56 (53%), Positives = 37/56 (66%)
Frame = +3 / +1
Query: 465 KRMRREVCNRR*SPTGRCIPCTPDLCSH*TH*N*HVKLPHSC*APLGVHVTPCV*S 632
+R+ EVC R*SPTGR IPCTPD C + N HV++ H AP V+ TPC+*S
Sbjct: 325 QRLCWEVCYGR*SPTGRRIPCTPDFCCSDSFSNRHVEISHPREAPRSVYDTPCI*S 492
Score = 66.6 bits (139), Expect(2) = 9e-043
Identities = 28/55 (50%), Positives = 36/55 (65%)
Frame = -2 / -3
Query: 630 FKRRV*HVLRVEPSKSGVV*HVNFSAFNGCIDLGCKEYICQLDFISCCILPGASF 466
FK RV H+L VEP + G+ HV+ + +LGCKEY+CQLDFIS LP +F
Sbjct: 490 FKCRVCHILIVEPREGGIFRHVDLKTSHCSKNLGCKEYVCQLDFISHSKLPSTAF 326
Score = 61.1 bits (127), Expect(3) = 1e-025
Identities = 28/51 (54%), Positives = 31/51 (60%)
Frame = +2 / +3
Query: 479 GSMQQEMKSNWQMYSLHPRSMQPLNALKLTCQTTPLLLGSTRSTCHTLRLK 631
GS+ EMKSNWQ YSLHPR + K TC+ P GST S HTL LK
Sbjct: 339 GSLLWEMKSNWQTYSLHPRFLLQ*LVFKSTCRNIPPSRGSTISI*HTLHLK 491
Score = 56.5 bits (117), Expect(2) = 4e-035
Identities = 28/55 (50%), Positives = 33/55 (60%)
Frame = -1 / -2
Query: 631 LQTQGVTCTPSGA*QEWGSLTCQF*CVQWLHRSGVQGIHLPVGLHLLLHTSRRIL 467
LQ QGV+ T GA + W TC+F +SGVQGI LPVGLHL TS+ L
Sbjct: 491 LQMQGVSYTDRGASRGWDISTCRFENESLQQKSGVQGIRLPVGLHLP*QTSQHSL 327
Score = 48.3 bits (99), Expect(3) = 1e-025
Identities = 20/27 (74%), Positives = 22/27 (81%)
Frame = +2 / +3
Query: 218 VTLTR*HCIWRTSTQSLLFYLKTFKRK 298
VTLT+*HCIWRTST S LF KT KR+
Sbjct: 84 VTLTQ*HCIWRTSTLSALFCPKTLKRR 164
Score = 44.6 bits (91), Expect(3) = 1e-025
Identities = 24/41 (58%), Positives = 27/41 (65%)
Frame = +2 / +3
Query: 335 VFNLSITSQC*GSLTRRLVQGRVCCGLNNKSREVSQLLRT* 457
VFNL S * SL++R QGR G NN+ EVSQLLRT*
Sbjct: 201 VFNLFTISPW*DSLSKRSEQGRASRGSNNRLIEVSQLLRT* 323
>gb|BJ544512.1|BJ544512 BJ544512 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak30e08 5', mRNA sequence
Length = 503
Score = 216 bits (467), Expect(2) = 4e-082
Identities = 88/110 (80%), Positives = 101/110 (91%)
Frame = +1 / +2
Query: 133 KGEQSDPEFVKLNPMKFVPALVDGSSVIGDSYAITLYLEDKYPEPPLLPQDLQKKALNHQ 312
+GEQSDPEF+KLNPMKFVPA VDG +VIGDSYAI LYLEDKYP+ PLLPQDL+KKALN Q
Sbjct: 17 QGEQSDPEFMKLNPMKFVPAWVDGDAVIGDSYAIALYLEDKYPQRPLLPQDLEKKALNIQ 196
Query: 313 IASIVASGIQPLHNLTVLRFIDQKVGAGESVLWTQQQIERGFTAIENLIQ 462
IASIV SGIQPLHNLT++RFI+QKVG GES+ W QQQI+RGFTA+EN+I+
Sbjct: 197 IASIVCSGIQPLHNLTLVRFIEQKVGTGESLPWVQQQIDRGFTAVENMIK 346
Score = 166 bits (358), Expect(2) = 8e-062
Identities = 77/108 (71%), Positives = 79/108 (73%)
Frame = -3 / -3
Query: 458 IRFSIAVKPLSICC*VHNTLSPAPTFWSMNLNTVRLWRG*IPEATMLAIW*FKAFFXXXX 279
I FS AVKPLSICC H LSP PTF SMNL VRL RG*IPE TMLAIW F+AFF
Sbjct: 342 IMFSTAVKPLSICCWTHGRLSPVPTFCSMNLTKVRL*RG*IPEHTMLAIWIFRAFFSRSW 163
Query: 278 XXXXXXGYLSSKYSVIA*ESPITELPSTNAGTNFIGLSLTNSGSDCSP 135
GYLSSKY+ IA*ESPIT PST AGTNFIGLS NSGSDCSP
Sbjct: 162 GKRGR*GYLSSKYNAIA*ESPITASPSTQAGTNFIGLSFMNSGSDCSP 19
Score = 139 bits (298), Expect(2) = 2e-045
Identities = 68/114 (59%), Positives = 77/114 (67%)
Frame = +3 / +1
Query: 117 GGEPSQGRAV*SRIRQA*SYEVRPCVG*WQFCNR*LLRDNTVFGGQVPRASSSTSRPSKE 296
G S GRAV*SR+ +A*SYEVRPC+G + NR*LLR++ VFGGQVP A S RP KE
Sbjct: 1 GRSTSSGRAV*SRVHEA*SYEVRPCLGRRRRSNR*LLRNSIVFGGQVPSAPSFAPRP*KE 180
Query: 297 SFESPDCKHCSFWYSTSP*PHSVEVH*PEGWCRGECVVDSTTNRERFHSY*EPD 458
E PD KHC FWYSTS H E+H* +G RGE V TT+ RFHS *E D
Sbjct: 181 GPEYPDSKHCVFWYSTSSQSHLGEIH*AKGRNRGEPPVGPTTD**RFHSC*EHD 342
Score = 130 bits (279), Expect(2) = 1e-042
Identities = 59/110 (53%), Positives = 74/110 (67%)
Frame = -2 / -2
Query: 453 VLNSCETSLDLLLSPQHTLPCTNLLVNEPQHCEVMERLNTRSYNACNLVIQSFXXXXXXX 274
VLNSCETS++LLL P+ LPC++LL+NE E+++RLNTR++NAC L IQ
Sbjct: 337 VLNSCETSINLLLDPREALPCSDLLLNESHQGEIVKRLNTRTHNACYLDIQGLLFKVLGQ 158
Query: 273 XXXXXXXXLQIQCYRVRVTYYRTAINQRRDELHRIKLDEFWIRLLALEKV 124
LQIQCY VRVT Y A++ RDELHRIKL E IRLLAL ++
Sbjct: 157 KRALRVLVLQIQCYCVRVTDYCVAVDPGRDELHRIKLHELGIRLLALRRL 8
Score = 117 bits (251), Expect(2) = 8e-036
Identities = 65/110 (59%), Positives = 71/110 (64%)
Frame = -1 / -1
Query: 457 SGSQ*L*NLSRFVVESTTHSPLHQPSGQ*TSTL*GYGEVEYQKLQCLQSGDSKLSFEGLE 278
S SQ L*NL + VV T SPL +P Q* S * EVEYQ QCL SG S SF+GL
Sbjct: 341 SCSQQL*NLYQSVVGPTGGSPLFRPFAQ*ISPR*DCEEVEYQNTQCLLSGYSGPSFQGLG 162
Query: 277 VEEEALGTCPPNTVLSRKSHLLQNCHQPTQGRTS*D*A*RILDQTARP*E 128
+E A GTCPPNT+L RKSH L +P QGRTS*D*A DQTARP E
Sbjct: 161 AKEGAEGTCPPNTMLLRKSHRLLRRRRPRQGRTS*D*AS*TRDQTARPEE 12
Score = 108 bits (231), Expect(2) = 4e-082
Identities = 42/54 (77%), Positives = 49/54 (90%)
Frame = +1 / +2
Query: 463 LKGCAGKYATGDEVQLADVFLAPQIYAAIERTKIDMSNYPTLARLHSEYMSHPA 624
+KGCAGK+A GDEVQLADVFLAPQI+AA+ R +IDMS YPTLARLH +YM+HPA
Sbjct: 341 IKGCAGKFAMGDEVQLADVFLAPQIFAAVTRFQIDMSKYPTLARLHDQYMTHPA 502
Score = 90.9 bits (192), Expect(2) = 8e-062
Identities = 39/52 (75%), Positives = 41/52 (78%)
Frame = -3 / -3
Query: 623 AGCDMYSEWSLARVG*FDMSILVRSMAA*IWGARNTSASWTSSPVAYFPAHP 468
AGC +Y WSLARVG FDMSI R AA IWGARNTSASWTSSP+A FPA P
Sbjct: 501 AGCVIY*SWSLARVGYFDMSI*KRVTAAKIWGARNTSASWTSSPIANFPAQP 346
Score = 63.4 bits (132), Expect(2) = 2e-045
Identities = 28/53 (52%), Positives = 34/53 (64%)
Frame = +3 / +1
Query: 465 KRMRREVCNRR*SPTGRCIPCTPDLCSH*TH*N*HVKLPHSC*APLGVHVTPC 623
+R+ EVC R*SPTGR IPCTPD C + N HV++ H AP V+ TPC
Sbjct: 343 QRLCWEVCYGR*SPTGRRIPCTPDFCCSDSFSNRHVEISHPREAPRSVYDTPC 501
Score = 62.9 bits (131), Expect(2) = 1e-042
Identities = 26/52 (50%), Positives = 34/52 (65%)
Frame = -2 / -2
Query: 621 RV*HVLRVEPSKSGVV*HVNFSAFNGCIDLGCKEYICQLDFISCCILPGASF 466
RV H+L VEP + G+ HV+ + +LGCKEY+CQLDFIS LP +F
Sbjct: 499 RVCHILIVEPREGGIFRHVDLKTSHCSKNLGCKEYVCQLDFISHSKLPSTAF 344
Score = 57.0 bits (118), Expect(3) = 2e-024
Identities = 26/48 (54%), Positives = 29/48 (60%)
Frame = +2 / +3
Query: 479 GSMQQEMKSNWQMYSLHPRSMQPLNALKLTCQTTPLLLGSTRSTCHTL 622
GS+ EMKSNWQ YSLHPR + K TC+ P GST S HTL
Sbjct: 357 GSLLWEMKSNWQTYSLHPRFLLQ*LVFKSTCRNIPPSRGSTISI*HTL 500
Score = 52.8 bits (109), Expect(2) = 8e-036
Identities = 26/52 (50%), Positives = 31/52 (59%)
Frame = -1 / -1
Query: 622 QGVTCTPSGA*QEWGSLTCQF*CVQWLHRSGVQGIHLPVGLHLLLHTSRRIL 467
QGV+ T GA + W TC+F +SGVQGI LPVGLHL TS+ L
Sbjct: 500 QGVSYTDRGASRGWDISTCRFENESLQQKSGVQGIRLPVGLHLP*QTSQHSL 345
Score = 48.3 bits (99), Expect(3) = 2e-024
Identities = 20/27 (74%), Positives = 22/27 (81%)
Frame = +2 / +3
Query: 218 VTLTR*HCIWRTSTQSLLFYLKTFKRK 298
VTLT+*HCIWRTST S LF KT KR+
Sbjct: 102 VTLTQ*HCIWRTSTLSALFCPKTLKRR 182
Score = 44.6 bits (91), Expect(3) = 2e-024
Identities = 24/41 (58%), Positives = 27/41 (65%)
Frame = +2 / +3
Query: 335 VFNLSITSQC*GSLTRRLVQGRVCCGLNNKSREVSQLLRT* 457
VFNL S * SL++R QGR G NN+ EVSQLLRT*
Sbjct: 219 VFNLFTISPW*DSLSKRSEQGRASRGSNNRLIEVSQLLRT* 341
>gb|BF253552.2|BF253552 HVSMEf0001D24f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0001D24f, mRNA sequence
Length = 558
Score = 299 bits (647), Expect = 2e-080
Identities = 122/154 (79%), Positives = 137/154 (88%)
Frame = +1 / +2
Query: 1 MAEVEATVGRLMLYSYWRSSCSHRARIALNLKGVDYEYKAVNLLKGEQSDPEFVKLNPMK 180
MA EA R +LYSYWRSSCSHR RIALNLKG+DYEYKAVNLLKGEQSDPEF+KLNPMK
Sbjct: 83 MASAEAPAARPILYSYWRSSCSHRVRIALNLKGIDYEYKAVNLLKGEQSDPEFMKLNPMK 262
Query: 181 FVPALVDGSSVIGDSYAITLYLEDKYPEPPLLPQDLQKKALNHQIASIVASGIQPLHNLT 360
FVPA VDG ++IGDSYAI LYLEDKYP+ PLLPQDL+KKALN QIASIV SGIQPLHNLT
Sbjct: 263 FVPAWVDGDAIIGDSYAIALYLEDKYPQRPLLPQDLEKKALNIQIASIVCSGIQPLHNLT 442
Query: 361 VLRFIDQKVGAGESVLWTQQQIERGFTAIENLIQ 462
++RFI+QKVG GES+ W QQQI+R FTA+EN+I+
Sbjct: 443 LVRFIEQKVGTGESLPWVQQQIDRRFTAVENMIK 544
Score = 221 bits (476), Expect = 6e-057
Identities = 105/152 (69%), Positives = 107/152 (70%)
Frame = -3 / -1
Query: 458 IRFSIAVKPLSICC*VHNTLSPAPTFWSMNLNTVRLWRG*IPEATMLAIW*FKAFFXXXX 279
I FS AV LSICC H LSP PTF SMNL VRL RG*IPE TMLAIW F+AFF
Sbjct: 540 IMFSTAVNLLSICCWTHGRLSPVPTFCSMNLTKVRL*RG*IPEHTMLAIWIFRAFFSRSW 361
Query: 278 XXXXXXGYLSSKYSVIA*ESPITELPSTNAGTNFIGLSLTNSGSDCSPLRRFTALYS*ST 99
GYLSSKY+ IA*ESPI PST AGTNFIGLS NSGSDCSPLRR TALYS*S
Sbjct: 360 GKRGR*GYLSSKYNAIA*ESPIIASPSTQAGTNFIGLSFMNSGSDCSPLRRLTALYS*SM 181
Query: 98 PLRLRAMRARWEHELRQYEYSISRPTVASTSA 3
PLRL AMR RWE ELRQYE I R AS A
Sbjct: 180 PLRLSAMRTRWEQELRQYE*RIGRAAGASAEA 85
Score = 171 bits (367), Expect = 7e-042
Identities = 79/151 (52%), Positives = 98/151 (64%)
Frame = -2 / -3
Query: 453 VLNSCETSLDLLLSPQHTLPCTNLLVNEPQHCEVMERLNTRSYNACNLVIQSFXXXXXXX 274
VLNSCE S++LLL P+ PC++LL+NE E+++RLNTR++NAC L IQ
Sbjct: 535 VLNSCEPSINLLLDPRKAFPCSDLLLNESHQGEIVKRLNTRTHNACYLDIQGLLFKVLGQ 356
Query: 273 XXXXXXXXLQIQCYRVRVTYYRTAINQRRDELHRIKLDEFWIRLLALEKVHRLVLVIHTF 94
LQIQCY V V Y ++ RDELHRIKL E IRLLALE+V RLVL+I F
Sbjct: 355 KRALRVLVLQIQCYCVGVADYCVPVDPGRDELHRIKLHELGIRLLALEEVDRLVLIIDAF 176
Query: 93 EIESDAGTVGARAAPVRVQHQSPHRRLHLRH 1
E+E DA VGA AAPVRV+++ RRL H
Sbjct: 175 EVERDADAVGAGAAPVRVENRPRRRRLRRSH 83
Score = 160 bits (344), Expect = 1e-038
Identities = 79/144 (54%), Positives = 91/144 (63%)
Frame = +3 / +1
Query: 27 ATDXXXXXXXXXXPPCPHRSQSQRCGLRVQGGEPSQGRAV*SRIRQA*SYEVRPCVG*WQ 206
A D PP PHR+Q QR L VQGG+P QGRAV*SR+ +A*SYEVRPC+G
Sbjct: 109 AADSLLVLAQLLLPPRPHRAQPQRHRL*VQGGQPPQGRAV*SRVHEA*SYEVRPCLGRRG 288
Query: 207 FCNR*LLRDNTVFGGQVPRASSSTSRPSKESFESPDCKHCSFWYSTSP*PHSVEVH*PEG 386
NR LLR++ VFGGQVP A S RP KE E PD KHC FWYSTS H E+H* +G
Sbjct: 289 RNNRRLLRNSIVFGGQVPSAPSFAPRP*KEGPEYPDSKHCVFWYSTSSQSHLGEIH*AKG 468
Query: 387 WCRGECVVDSTTNRERFHSY*EPD 458
RG+ V TT+ + HS *E D
Sbjct: 469 RNRGKPSVGPTTD**KVHSC*EHD 540
Score = 135 bits (290), Expect = 3e-031
Identities = 74/131 (56%), Positives = 81/131 (61%)
Frame = -1 / -2
Query: 457 SGSQ*L*NLSRFVVESTTHSPLHQPSGQ*TSTL*GYGEVEYQKLQCLQSGDSKLSFEGLE 278
S SQ L* + VV T PL +P Q* S * EVEYQ QCL SG S SF+GL
Sbjct: 539 SCSQQL*TFYQSVVGPTEGFPLFRPFAQ*ISPR*DCEEVEYQNTQCLLSGYSGPSFQGLG 360
Query: 277 VEEEALGTCPPNTVLSRKSHLLQNCHQPTQGRTS*D*A*RILDQTARP*EGSPPCTRNPH 98
+E A GTCPPNT+L R+S L +P QGRTS*D*A DQTARP* G PPCT N
Sbjct: 359 AKEGAEGTCPPNTMLLRRSRRLLRPRRPRQGRTS*D*AS*TRDQTARP*GG*PPCTHNRC 180
Query: 97 L*D*ERCGHGG 65
L* * RCG GG
Sbjct: 179 L*G*ARCGRGG 147
>gb|BF255119.2|BF255119 HVSMEf0006A03f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0006A03f, mRNA sequence
Length = 604
Score = 279 bits (603), Expect(2) = 2e-080
Identities = 117/152 (76%), Positives = 130/152 (85%)
Frame = +1 / +1
Query: 1 MAEVEATVGRLMLYSYWRSSCSHRARIALNLKGVDYEYKAVNLLKGEQSDPEFVKLNPMK 180
MA EA R +LYSYWRSSCSHR RIALNLKG+DYEYKAVNLLKGEQSDPEF+KLNPMK
Sbjct: 40 MAGAEAPAARPILYSYWRSSCSHRVRIALNLKGIDYEYKAVNLLKGEQSDPEFMKLNPMK 219
Query: 181 FVPALVDGSSVIGDSYAITLYLEDKYPEPPLLPQDLQKKALNHQIASIVASGIQPLHNLT 360
FVPA VDG +VIGDSYAI LYLED YP+ PLLPQDL+KKALN QIASI S IQPL+NLT
Sbjct: 220 FVPAWVDGDAVIGDSYAIALYLEDNYPQRPLLPQDLEKKALNIQIASIECSDIQPLYNLT 399
Query: 361 VLRFIDQKVGAGESVLWTQQQIERGFTAIENL 456
++RFI+QKVG ES+ W QQQI+RG TA EN+
Sbjct: 400 LVRFIEQKVGTWESLPWVQQQIDRGVTAGENM 495
Score = 166 bits (356), Expect(2) = 2e-045
Identities = 78/151 (51%), Positives = 96/151 (63%)
Frame = -2 / -2
Query: 453 VLNSCETSLDLLLSPQHTLPCTNLLVNEPQHCEVMERLNTRSYNACNLVIQSFXXXXXXX 274
VL SC+TS++LLL P+ LPC +LL+NE E+++RLN R+ NAC L IQ
Sbjct: 492 VLTSCDTSINLLLDPRKALPCPDLLLNESHQGEIVKRLNIRTLNACYLDIQGLLFKVLGQ 313
Query: 273 XXXXXXXXLQIQCYRVRVTYYRTAINQRRDELHRIKLDEFWIRLLALEKVHRLVLVIHTF 94
LQIQCY V V Y ++ RDELHRIKL E IRLLALE+V RLVL+I F
Sbjct: 312 KRALRVIVLQIQCYCVGVADYCVPVDPGRDELHRIKLHELGIRLLALEEVDRLVLIIDAF 133
Query: 93 EIESDAGTVGARAAPVRVQHQSPHRRLHLRH 1
E+E DA VGA AAPVRV+++ RRL H
Sbjct: 132 EVERDADAVGAGAAPVRVENRPRRRRLRPSH 40
Score = 146 bits (313), Expect(2) = 7e-040
Identities = 76/142 (53%), Positives = 88/142 (61%)
Frame = +3 / +3
Query: 27 ATDXXXXXXXXXXPPCPHRSQSQRCGLRVQGGEPSQGRAV*SRIRQA*SYEVRPCVG*WQ 206
A D PP PHR+Q QR L VQGG+P QGRAV*SR+ +A*SYEVRPC+G
Sbjct: 66 AADSLLVLAQLLLPPRPHRAQPQRHRL*VQGGQPPQGRAV*SRVHEA*SYEVRPCLGRRG 245
Query: 207 FCNR*LLRDNTVFGGQVPRASSSTSRPSKESFESPDCKHCSFWYSTSP*PHSVEVH*PEG 386
NR LLR++ VFGGQ+P A S RP KE E PD KH F YSTS H E+H* +G
Sbjct: 246 RSNRRLLRNSIVFGGQLPSAPSFAPRP*KEGPEYPDSKH*VF*YSTSLQSHLGEIH*AKG 425
Query: 387 WCRGECVVDSTTNRERFHSY*E 452
GE V TT+ R HS+*E
Sbjct: 426 RDMGEPSVGPTTD**RCHSW*E 491
Score = 140 bits (300), Expect(3) = 2e-057
Identities = 64/84 (76%), Positives = 65/84 (77%)
Frame = -3 / -3
Query: 254 LSSKYSVIA*ESPITELPSTNAGTNFIGLSLTNSGSDCSPLRRFTALYS*STPLRLRAMR 75
LSSKY+ IA*ESPIT PST AGTNFIGLS NSGSDCSPLRR TALYS*S PLRL AMR
Sbjct: 293 LSSKYNAIA*ESPITASPSTQAGTNFIGLSFMNSGSDCSPLRRLTALYS*SMPLRLSAMR 114
Query: 74 ARWEHELRQYEYSISRPTVASTSA 3
RWE ELRQYE I R AS A
Sbjct: 113 TRWEQELRQYE*RIGRAAGASAPA 42
Score = 135 bits (289), Expect(2) = 2e-034
Identities = 73/131 (55%), Positives = 82/131 (62%)
Frame = -1 / -1
Query: 457 SGSQ*L*NLSRFVVESTTHSPLHQPSGQ*TSTL*GYGEVEYQKLQCLQSGDSKLSFEGLE 278
S S L*+L + VV T SP+ +P Q* S * EVEYQ QCL SG S SF+GL
Sbjct: 496 SCSHQL*HLYQSVVGPTEGSPMSRPFAQ*ISPR*DCKEVEYQNTQCLLSGYSGPSFQGLG 317
Query: 277 VEEEALGTCPPNTVLSRKSHLLQNCHQPTQGRTS*D*A*RILDQTARP*EGSPPCTRNPH 98
+E A G CPPNT+L R+S L +P QGRTS*D*A DQTARP* G PPCT N
Sbjct: 316 AKEGAEGNCPPNTMLLRRSRRLLRPRRPRQGRTS*D*AS*TRDQTARP*GG*PPCTHNRC 137
Query: 97 L*D*ERCGHGG 65
L* * RCG GG
Sbjct: 136 L*G*ARCGRGG 104
Score = 80.8 bits (170), Expect(3) = 2e-057
Identities = 37/54 (68%), Positives = 39/54 (72%)
Frame = -3 / -3
Query: 452 FSIAVKPLSICC*VHNTLSPAPTFWSMNLNTVRLWRG*IPEATMLAIW*FKAFF 291
FS AV PLSICC H LS PTF SMNL VRL RG*I E +MLAIW F+AFF
Sbjct: 491 FSPAVTPLSICCWTHGRLSHVPTFCSMNLTKVRL*RG*ISEHSMLAIWIFRAFF 330
Score = 40.9 bits (83), Expect(2) = 2e-080
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +1 / +3
Query: 493 GDEVQLADVFLAPQIYAAI 549
GDEV LADVFLAPQI+AA+
Sbjct: 525 GDEVHLADVFLAPQIFAAV 581
Score = 40.9 bits (83), Expect(3) = 2e-057
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = -3 / -1
Query: 545 AA*IWGARNTSASWTSSP 492
AA IWGARNTSA WTSSP
Sbjct: 577 AAKIWGARNTSARWTSSP 524
Score = 38.2 bits (77), Expect(2) = 7e-040
Identities = 14/23 (60%), Positives = 15/23 (65%)
Frame = +2 / +1
Query: 467 KDAPGSMQQEMKSNWQMYSLHPR 535
K G + EMKS WQ YSLHPR
Sbjct: 499 KGCAGKLYWEMKSTWQTYSLHPR 567
Score = 37.3 bits (75), Expect(2) = 2e-045
Identities = 12/15 (80%), Positives = 15/15 (100%)
Frame = -2 / -3
Query: 537 DLGCKEYICQLDFIS 493
+LGCKEY+CQ+DFIS
Sbjct: 569 NLGCKEYVCQVDFIS 525
Score = 30.9 bits (61), Expect(2) = 2e-034
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = -1 / -2
Query: 538 RSGVQGIHLPVGLHL 494
+SGVQGI LP GLHL
Sbjct: 570 KSGVQGIRLPGGLHL 526
>gb|BJ545973.1|BJ545973 BJ545973 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak30e08 3', mRNA sequence
Length = 586
Score = 172 bits (370), Expect(2) = 2e-078
Identities = 70/89 (78%), Positives = 81/89 (91%)
Frame = +1 / -1
Query: 196 VDGSSVIGDSYAITLYLEDKYPEPPLLPQDLQKKALNHQIASIVASGIQPLHNLTVLRFI 375
VDG +VIGDSYAI LYLEDKYP+ PLLPQDL+KKALN QIASIV SGIQPLHNLT++RFI
Sbjct: 583 VDGDAVIGDSYAIALYLEDKYPQRPLLPQDLEKKALNIQIASIVCSGIQPLHNLTLVRFI 404
Query: 376 DQKVGAGESVLWTQQQIERGFTAIENLIQ 462
+QKVG GES+ W QQQI+RGFTA+EN+I+
Sbjct: 403 EQKVGTGESLPWVQQQIDRGFTAVENMIK 317
Score = 140 bits (301), Expect(2) = 2e-078
Identities = 56/71 (78%), Positives = 65/71 (91%)
Frame = +1 / -1
Query: 463 LKGCAGKYATGDEVQLADVFLAPQIYAAIERTKIDMSNYPTLARLHSEYMSHPAFEAALP 642
+KGCAGK+A GDEVQLADVFLAPQI+AA+ R +IDMS YPTLARLH +YM+HPAFEAALP
Sbjct: 322 IKGCAGKFAMGDEVQLADVFLAPQIFAAVTRFQIDMSKYPTLARLHDQYMTHPAFEAALP 143
Query: 643 GKQPDAPSSS* 675
+QPDAPSS+*
Sbjct: 142 DRQPDAPSSA* 110
Score = 125 bits (268), Expect(2) = 8e-058
Identities = 60/88 (68%), Positives = 62/88 (70%)
Frame = -3 / +3
Query: 458 IRFSIAVKPLSICC*VHNTLSPAPTFWSMNLNTVRLWRG*IPEATMLAIW*FKAFFXXXX 279
I FS AVKPLSICC H LSP PTF SMNL VRL RG*IPE TMLAIW F+AFF
Sbjct: 321 IMFSTAVKPLSICCWTHGRLSPVPTFCSMNLTKVRL*RG*IPEHTMLAIWIFRAFFSRSW 500
Query: 278 XXXXXXGYLSSKYSVIA*ESPITELPST 195
GYLSSKY+ IA*ESPIT PST
Sbjct: 501 GKRGR*GYLSSKYNAIA*ESPITASPST 584
Score = 118 bits (253), Expect(2) = 8e-058
Identities = 51/67 (76%), Positives = 54/67 (80%)
Frame = -3 / +3
Query: 668 DEGASGCLPGSAASNAGCDMYSEWSLARVG*FDMSILVRSMAA*IWGARNTSASWTSSPV 489
+EGASGC GSAASNAGC +Y WSLARVG FDMSI R AA IWGARNTSASWTSSP+
Sbjct: 117 EEGASGCRSGSAASNAGCVIY*SWSLARVGYFDMSI*KRVTAAKIWGARNTSASWTSSPI 296
Query: 488 AYFPAHP 468
A FPA P
Sbjct: 297 ANFPAQP 317
Score = 100 bits (214), Expect(2) = 5e-038
Identities = 49/82 (59%), Positives = 54/82 (65%)
Frame = +3 / -3
Query: 213 NR*LLRDNTVFGGQVPRASSSTSRPSKESFESPDCKHCSFWYSTSP*PHSVEVH*PEGWC 392
NR*LLR++ VFGGQVP A S RP KE E PD KHC FWYSTS H E+H* +G
Sbjct: 566 NR*LLRNSIVFGGQVPSAPSFAPRP*KEGPEYPDSKHCVFWYSTSSQSHLGEIH*AKGRN 387
Query: 393 RGECVVDSTTNRERFHSY*EPD 458
RGE V TT+ RFHS *E D
Sbjct: 386 RGEPPVGPTTD**RFHSC*EHD 321
Score = 97.3 bits (206), Expect(2) = 2e-035
Identities = 43/86 (50%), Positives = 56/86 (65%)
Frame = -2 / +2
Query: 453 VLNSCETSLDLLLSPQHTLPCTNLLVNEPQHCEVMERLNTRSYNACNLVIQSFXXXXXXX 274
VLNSCETS++LLL P+ LPC++LL+NE E+++RLNTR++NAC L IQ
Sbjct: 326 VLNSCETSINLLLDPREALPCSDLLLNESHQGEIVKRLNTRTHNACYLDIQGLLFKVLGQ 505
Query: 273 XXXXXXXXLQIQCYRVRVTYYRTAIN 196
LQIQCY VRVT Y A++
Sbjct: 506 KRALRVLVLQIQCYCVRVTDYCVAVD 583
Score = 91.3 bits (193), Expect(2) = 3e-033
Identities = 49/88 (55%), Positives = 55/88 (62%)
Frame = -1 / +1
Query: 457 SGSQ*L*NLSRFVVESTTHSPLHQPSGQ*TSTL*GYGEVEYQKLQCLQSGDSKLSFEGLE 278
S SQ L*NL + VV T SPL +P Q* S * EVEYQ QCL SG S SF+GL
Sbjct: 322 SCSQQL*NLYQSVVGPTGGSPLFRPFAQ*ISPR*DCEEVEYQNTQCLLSGYSGPSFQGLG 501
Query: 277 VEEEALGTCPPNTVLSRKSHLLQNCHQP 194
+E A GTCPPNT+L RKSH L +P
Sbjct: 502 AKEGAEGTCPPNTMLLRKSHRLLRRRRP 585
Score = 77.1 bits (162), Expect(2) = 5e-038
Identities = 36/70 (51%), Positives = 44/70 (62%)
Frame = +3 / -3
Query: 465 KRMRREVCNRR*SPTGRCIPCTPDLCSH*TH*N*HVKLPHSC*APLGVHVTPCV*SSAPW 644
+R+ EVC R*SPTGR IPCTPD C + N HV++ H AP V+ TPC+*S AP
Sbjct: 320 QRLCWEVCYGR*SPTGRRIPCTPDFCCSDSFSNRHVEISHPREAPRSVYDTPCI*SCAP* 141
Query: 645 QATGRPFILL 674
A PF+ L
Sbjct: 140 PAARCPFLCL 111
Score = 73.9 bits (155), Expect(3) = 3e-029
Identities = 35/67 (52%), Positives = 40/67 (59%)
Frame = +2 / -2
Query: 479 GSMQQEMKSNWQMYSLHPRSMQPLNALKLTCQTTPLLLGSTRSTCHTLRLKQRSLASNRT 658
GS+ EMKSNWQ YSLHPR + K TC+ P GST S HTL LK RSL +
Sbjct: 306 GSLLWEMKSNWQTYSLHPRFLLQ*LVFKSTCRNIPPSRGSTISI*HTLHLKLRSLTGSPM 127
Query: 659 PLHPPRN 679
PL PR+
Sbjct: 126 PLPLPRH 106
Score = 72.1 bits (151), Expect(2) = 2e-035
Identities = 37/76 (48%), Positives = 44/76 (57%)
Frame = -1 / +1
Query: 694 TH*GAVPRRMKGRPVACQGALLQTQGVTCTPSGA*QEWGSLTCQF*CVQWLHRSGVQGIH 515
TH + R+ KG A QGA LQ QGV+ T GA + W TC+F +SGVQGI
Sbjct: 91 THPRPMSRQRKGHRAAGQGAQLQMQGVSYTDRGASRGWDISTCRFENESLQQKSGVQGIR 270
Query: 514 LPVGLHLLLHTSRRIL 467
LPVGLHL TS+ L
Sbjct: 271 LPVGLHLP*QTSQHSL 318
Score = 70.7 bits (148), Expect(2) = 3e-033
Identities = 30/58 (51%), Positives = 38/58 (65%)
Frame = -2 / +2
Query: 639 ERCFKRRV*HVLRVEPSKSGVV*HVNFSAFNGCIDLGCKEYICQLDFISCCILPGASF 466
ER FK RV H+L VEP + G+ HV+ + +LGCKEY+CQLDFIS LP +F
Sbjct: 146 ERSFKCRVCHILIVEPREGGIFRHVDLKTSHCSKNLGCKEYVCQLDFISHSKLPSTAF 319
Score = 48.3 bits (99), Expect(3) = 3e-029
Identities = 20/27 (74%), Positives = 22/27 (81%)
Frame = +2 / -2
Query: 218 VTLTR*HCIWRTSTQSLLFYLKTFKRK 298
VTLT+*HCIWRTST S LF KT KR+
Sbjct: 561 VTLTQ*HCIWRTSTLSALFCPKTLKRR 481
Score = 44.6 bits (91), Expect(3) = 3e-029
Identities = 24/41 (58%), Positives = 27/41 (65%)
Frame = +2 / -2
Query: 335 VFNLSITSQC*GSLTRRLVQGRVCCGLNNKSREVSQLLRT* 457
VFNL S * SL++R QGR G NN+ EVSQLLRT*
Sbjct: 444 VFNLFTISPW*DSLSKRSEQGRASRGSNNRLIEVSQLLRT* 322
>gb|CA002182.1|CA002182 HS06M06r HS Hordeum vulgare subsp. vulgare cDNA clone HS06M06
5-PRIME, mRNA sequence
Length = 601
Score = 289 bits (626), Expect = 1e-077
Identities = 119/147 (80%), Positives = 131/147 (89%)
Frame = +1 / +3
Query: 1 MAEVEATVGRLMLYSYWRSSCSHRARIALNLKGVDYEYKAVNLLKGEQSDPEFVKLNPMK 180
MA EA R +LYSYWRSSCSHR RIALNLKG+DYEYKAVNLLKGEQSDPEF+KLNPMK
Sbjct: 159 MASAEAPAARPILYSYWRSSCSHRVRIALNLKGIDYEYKAVNLLKGEQSDPEFMKLNPMK 338
Query: 181 FVPALVDGSSVIGDSYAITLYLEDKYPEPPLLPQDLQKKALNHQIASIVASGIQPLHNLT 360
FVPA V+G +VIGDSYAI LYLEDKYP+ PLLPQDL+KKALN QIASIV SGIQPLHNLT
Sbjct: 339 FVPAWVNGDAVIGDSYAIALYLEDKYPQRPLLPQDLEKKALNIQIASIVCSGIQPLHNLT 518
Query: 361 VLRFIDQKVGAGESVLWTQQQIERGFT 441
++RFI+QKVG GES+ W QQQI+RGFT
Sbjct: 519 LVRFIEQKVGTGESLPWVQQQIDRGFT 599
Score = 222 bits (479), Expect = 2e-057
Identities = 104/147 (70%), Positives = 106/147 (72%)
Frame = -3 / -1
Query: 443 AVKPLSICC*VHNTLSPAPTFWSMNLNTVRLWRG*IPEATMLAIW*FKAFFXXXXXXXXX 264
AVKPLSICC H LSP PTF SMNL VRL RG*IPE TMLAIW F+AFF
Sbjct: 601 AVKPLSICCWTHGRLSPVPTFCSMNLTKVRL*RG*IPEHTMLAIWIFRAFFSRSWGKRGR 422
Query: 263 XGYLSSKYSVIA*ESPITELPSTNAGTNFIGLSLTNSGSDCSPLRRFTALYS*STPLRLR 84
GYLSSKY+ IA*ESPIT P T AGTNFIGLS NSGSDCSPLRR TALYS*S PLRL
Sbjct: 421 *GYLSSKYNAIA*ESPITASPLTQAGTNFIGLSFMNSGSDCSPLRRLTALYS*SIPLRLS 242
Query: 83 AMRARWEHELRQYEYSISRPTVASTSA 3
AMR RWE ELRQYE I R AS A
Sbjct: 241 AMRTRWEQELRQYE*RIGRAAGASAEA 161
Score = 177 bits (382), Expect = 6e-044
Identities = 81/147 (55%), Positives = 100/147 (68%)
Frame = -2 / -3
Query: 441 CETSLDLLLSPQHTLPCTNLLVNEPQHCEVMERLNTRSYNACNLVIQSFXXXXXXXXXXX 262
CETS++LLL P+ LPC++LL+NE E+++RLNTR++NAC L IQ
Sbjct: 599 CETSINLLLDPREALPCSDLLLNESHQGEIVKRLNTRTHNACYLDIQGLLFKVLGQKRAL 420
Query: 261 XXXXLQIQCYRVRVTYYRTAINQRRDELHRIKLDEFWIRLLALEKVHRLVLVIHTFEIES 82
LQIQCY VRVT Y A++ RDELHRIKL E IRLLALE+V RLVL+I TFE+E
Sbjct: 419 RVLVLQIQCYCVRVTDYCVAVDPGRDELHRIKLHELGIRLLALEEVDRLVLIIDTFEVER 240
Query: 81 DAGTVGARAAPVRVQHQSPHRRLHLRH 1
DA VGA AAPVRV+++ RRL H
Sbjct: 239 DADAVGAGAAPVRVENRPRRRRLRRSH 159
Score = 168 bits (361), Expect = 5e-041
Identities = 80/139 (57%), Positives = 91/139 (65%)
Frame = +3 / +2
Query: 27 ATDXXXXXXXXXXPPCPHRSQSQRCGLRVQGGEPSQGRAV*SRIRQA*SYEVRPCVG*WQ 206
A D PP PHR+Q QR L VQGG+P QGRAV*SR+ +A*SYEVRPC+G +
Sbjct: 185 AADSLLVLAQLLLPPRPHRAQPQRYRL*VQGGQPPQGRAV*SRVHEA*SYEVRPCLGQRR 364
Query: 207 FCNR*LLRDNTVFGGQVPRASSSTSRPSKESFESPDCKHCSFWYSTSP*PHSVEVH*PEG 386
NR*LLR++ VFGGQVP A S RP KE E PD KHC FWYSTS H E+H* +G
Sbjct: 365 RSNR*LLRNSIVFGGQVPSAPSFAPRP*KEGPEYPDSKHCVFWYSTSSQSHLGEIH*AKG 544
Query: 387 WCRGECVVDSTTNRERFHS 443
RGE V TT+ RFHS
Sbjct: 545 RNRGEPPVGPTTD**RFHS 601
Score = 144 bits (310), Expect = 5e-034
Identities = 76/126 (60%), Positives = 82/126 (65%)
Frame = -1 / -2
Query: 442 L*NLSRFVVESTTHSPLHQPSGQ*TSTL*GYGEVEYQKLQCLQSGDSKLSFEGLEVEEEA 263
L*NL + VV T SPL +P Q* S * EVEYQ QCL SG S SF+GL +E A
Sbjct: 600 L*NLYQSVVGPTGGSPLFRPFAQ*ISPR*DCEEVEYQNTQCLLSGYSGPSFQGLGAKEGA 421
Query: 262 LGTCPPNTVLSRKSHLLQNCHQPTQGRTS*D*A*RILDQTARP*EGSPPCTRNPHL*D*E 83
GTCPPNT+L RKSH L P QGRTS*D*A DQTARP* G PPCT N +L* *
Sbjct: 420 EGTCPPNTMLLRKSHRLLRRR*PRQGRTS*D*AS*TRDQTARP*GG*PPCTHNRYL*G*A 241
Query: 82 RCGHGG 65
RCG GG
Sbjct: 240 RCGRGG 223
>gb|BJ550139.1|BJ550139 BJ550139 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags37m16 3', mRNA sequence
Length = 684
Score = 168 bits (361), Expect(2) = 4e-077
Identities = 68/88 (77%), Positives = 80/88 (90%)
Frame = +1 / -3
Query: 199 DGSSVIGDSYAITLYLEDKYPEPPLLPQDLQKKALNHQIASIVASGIQPLHNLTVLRFID 378
+G +VIGDSYAI LYLEDKYP+ PLLPQDL+KKALN QIASIV SGIQPLHNLT++RFI+
Sbjct: 682 NGDAVIGDSYAIALYLEDKYPQRPLLPQDLEKKALNIQIASIVCSGIQPLHNLTLVRFIE 503
Query: 379 QKVGAGESVLWTQQQIERGFTAIENLIQ 462
QKVG GES+ W QQQI+RGFTA+EN+I+
Sbjct: 502 QKVGTGESLPWVQQQIDRGFTAVENMIK 419
Score = 140 bits (301), Expect(2) = 4e-077
Identities = 56/71 (78%), Positives = 65/71 (91%)
Frame = +1 / -3
Query: 463 LKGCAGKYATGDEVQLADVFLAPQIYAAIERTKIDMSNYPTLARLHSEYMSHPAFEAALP 642
+KGCAGK+A GDEVQLADVFLAPQI+AA+ R +IDMS YPTLARLH +YM+HPAFEAALP
Sbjct: 424 IKGCAGKFAMGDEVQLADVFLAPQIFAAVTRFQIDMSKYPTLARLHDQYMTHPAFEAALP 245
Query: 643 GKQPDAPSSS* 675
+QPDAPSS+*
Sbjct: 244 DRQPDAPSSA* 212
Score = 121 bits (259), Expect(2) = 1e-056
Identities = 58/86 (67%), Positives = 60/86 (69%)
Frame = -3 / +3
Query: 458 IRFSIAVKPLSICC*VHNTLSPAPTFWSMNLNTVRLWRG*IPEATMLAIW*FKAFFXXXX 279
I FS AVKPLSICC H LSP PTF SMNL VRL RG*IPE TMLAIW F+AFF
Sbjct: 423 IMFSTAVKPLSICCWTHGRLSPVPTFCSMNLTKVRL*RG*IPEHTMLAIWIFRAFFSRSW 602
Query: 278 XXXXXXGYLSSKYSVIA*ESPITELP 201
GYLSSKY+ IA*ESPIT P
Sbjct: 603 GKRGR*GYLSSKYNAIA*ESPITASP 680
Score = 118 bits (253), Expect(2) = 1e-056
Identities = 51/67 (76%), Positives = 54/67 (80%)
Frame = -3 / +3
Query: 668 DEGASGCLPGSAASNAGCDMYSEWSLARVG*FDMSILVRSMAA*IWGARNTSASWTSSPV 489
+EGASGC GSAASNAGC +Y WSLARVG FDMSI R AA IWGARNTSASWTSSP+
Sbjct: 219 EEGASGCRSGSAASNAGCVIY*SWSLARVGYFDMSI*KRVTAAKIWGARNTSASWTSSPI 398
Query: 488 AYFPAHP 468
A FPA P
Sbjct: 399 ANFPAQP 419
Score = 100 bits (214), Expect(2) = 5e-038
Identities = 49/82 (59%), Positives = 54/82 (65%)
Frame = +3 / -2
Query: 213 NR*LLRDNTVFGGQVPRASSSTSRPSKESFESPDCKHCSFWYSTSP*PHSVEVH*PEGWC 392
NR*LLR++ VFGGQVP A S RP KE E PD KHC FWYSTS H E+H* +G
Sbjct: 668 NR*LLRNSIVFGGQVPSAPSFAPRP*KEGPEYPDSKHCVFWYSTSSQSHLGEIH*AKGRN 489
Query: 393 RGECVVDSTTNRERFHSY*EPD 458
RGE V TT+ RFHS *E D
Sbjct: 488 RGEPPVGPTTD**RFHSC*EHD 423
Score = 96.8 bits (205), Expect(2) = 3e-035
Identities = 43/85 (50%), Positives = 55/85 (64%)
Frame = -2 / +2
Query: 453 VLNSCETSLDLLLSPQHTLPCTNLLVNEPQHCEVMERLNTRSYNACNLVIQSFXXXXXXX 274
VLNSCETS++LLL P+ LPC++LL+NE E+++RLNTR++NAC L IQ
Sbjct: 428 VLNSCETSINLLLDPREALPCSDLLLNESHQGEIVKRLNTRTHNACYLDIQGLLFKVLGQ 607
Query: 273 XXXXXXXXLQIQCYRVRVTYYRTAI 199
LQIQCY VRVT Y A+
Sbjct: 608 KRALRVLVLQIQCYCVRVTDYCVAV 682
Score = 90.0 bits (190), Expect(2) = 8e-033
Identities = 48/82 (58%), Positives = 53/82 (64%)
Frame = -1 / +1
Query: 457 SGSQ*L*NLSRFVVESTTHSPLHQPSGQ*TSTL*GYGEVEYQKLQCLQSGDSKLSFEGLE 278
S SQ L*NL + VV T SPL +P Q* S * EVEYQ QCL SG S SF+GL
Sbjct: 424 SCSQQL*NLYQSVVGPTGGSPLFRPFAQ*ISPR*DCEEVEYQNTQCLLSGYSGPSFQGLG 603
Query: 277 VEEEALGTCPPNTVLSRKSHLL 212
+E A GTCPPNT+L RKSH L
Sbjct: 604 AKEGAEGTCPPNTMLLRKSHRL 669
Score = 77.1 bits (162), Expect(2) = 5e-038
Identities = 36/70 (51%), Positives = 44/70 (62%)
Frame = +3 / -2
Query: 465 KRMRREVCNRR*SPTGRCIPCTPDLCSH*TH*N*HVKLPHSC*APLGVHVTPCV*SSAPW 644
+R+ EVC R*SPTGR IPCTPD C + N HV++ H AP V+ TPC+*S AP
Sbjct: 422 QRLCWEVCYGR*SPTGRRIPCTPDFCCSDSFSNRHVEISHPREAPRSVYDTPCI*SCAP* 243
Query: 645 QATGRPFILL 674
A PF+ L
Sbjct: 242 PAARCPFLCL 213
Score = 73.9 bits (155), Expect(3) = 3e-029
Identities = 35/67 (52%), Positives = 40/67 (59%)
Frame = +2 / -1
Query: 479 GSMQQEMKSNWQMYSLHPRSMQPLNALKLTCQTTPLLLGSTRSTCHTLRLKQRSLASNRT 658
GS+ EMKSNWQ YSLHPR + K TC+ P GST S HTL LK RSL +
Sbjct: 408 GSLLWEMKSNWQTYSLHPRFLLQ*LVFKSTCRNIPPSRGSTISI*HTLHLKLRSLTGSPM 229
Query: 659 PLHPPRN 679
PL PR+
Sbjct: 228 PLPLPRH 208
Score = 72.1 bits (151), Expect(2) = 3e-035
Identities = 37/76 (48%), Positives = 44/76 (57%)
Frame = -1 / +1
Query: 694 TH*GAVPRRMKGRPVACQGALLQTQGVTCTPSGA*QEWGSLTCQF*CVQWLHRSGVQGIH 515
TH + R+ KG A QGA LQ QGV+ T GA + W TC+F +SGVQGI
Sbjct: 193 THPRPMSRQRKGHRAAGQGAQLQMQGVSYTDRGASRGWDISTCRFENESLQQKSGVQGIR 372
Query: 514 LPVGLHLLLHTSRRIL 467
LPVGLHL TS+ L
Sbjct: 373 LPVGLHLP*QTSQHSL 420
Score = 70.7 bits (148), Expect(2) = 8e-033
Identities = 30/58 (51%), Positives = 38/58 (65%)
Frame = -2 / +2
Query: 639 ERCFKRRV*HVLRVEPSKSGVV*HVNFSAFNGCIDLGCKEYICQLDFISCCILPGASF 466
ER FK RV H+L VEP + G+ HV+ + +LGCKEY+CQLDFIS LP +F
Sbjct: 248 ERSFKCRVCHILIVEPREGGIFRHVDLKTSHCSKNLGCKEYVCQLDFISHSKLPSTAF 421
Score = 48.3 bits (99), Expect(3) = 3e-029
Identities = 20/27 (74%), Positives = 22/27 (81%)
Frame = +2 / -1
Query: 218 VTLTR*HCIWRTSTQSLLFYLKTFKRK 298
VTLT+*HCIWRTST S LF KT KR+
Sbjct: 663 VTLTQ*HCIWRTSTLSALFCPKTLKRR 583
Score = 44.6 bits (91), Expect(3) = 3e-029
Identities = 24/41 (58%), Positives = 27/41 (65%)
Frame = +2 / -1
Query: 335 VFNLSITSQC*GSLTRRLVQGRVCCGLNNKSREVSQLLRT* 457
VFNL S * SL++R QGR G NN+ EVSQLLRT*
Sbjct: 546 VFNLFTISPW*DSLSKRSEQGRASRGSNNRLIEVSQLLRT* 424
>gb|BI947528.1|BI947528 HVSMEl0005M13f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0005M13f, mRNA sequence
Length = 499
Score = 276 bits (598), Expect = 9e-074
Identities = 114/153 (74%), Positives = 129/153 (84%)
Frame = +1 / +1
Query: 1 MAEVEATVGRLMLYSYWRSSCSHRARIALNLKGVDYEYKAVNLLKGEQSDPEFVKLNPMK 180
MA EA R ++YSYWR SCSHR RIALNLKG+DYEYKAVNLLKGEQSDPEF+KLNPMK
Sbjct: 16 MASAEAPAARPIVYSYWRRSCSHRVRIALNLKGIDYEYKAVNLLKGEQSDPEFMKLNPMK 195
Query: 181 FVPALVDGSSVIGDSYAITLYLEDKYPEPPLLPQDLQKKALNHQIASIVASGIQPLHNLT 360
VPA VD ++IGDSYAI LYLEDKYP+ PLLPQDL+KKALN QIASI SGIQPLHNLT
Sbjct: 196 LVPAWVDWDAIIGDSYAIALYLEDKYPQRPLLPQDLEKKALNIQIASIACSGIQPLHNLT 375
Query: 361 VLRFIDQKVGAGESVLWTQQQIERGFTAIENLI 459
++R I+ KV GES+ W QQQI+RG TA+EN+I
Sbjct: 376 LVRLIEXKV*TGESLPWVQQQIDRGCTAVENMI 474
Score = 211 bits (456), Expect = 4e-054
Identities = 99/152 (65%), Positives = 107/152 (70%)
Frame = -3 / -3
Query: 458 IRFSIAVKPLSICC*VHNTLSPAPTFWSMNLNTVRLWRG*IPEATMLAIW*FKAFFXXXX 279
I FS AV+PLSICC H LSP T SM+L VRL RG*IPE MLAIW F+AFF
Sbjct: 473 IMFSTAVQPLSICCWTHGRLSPVQTXCSMSLTKVRL*RG*IPEHAMLAIWIFRAFFSRSW 294
Query: 278 XXXXXXGYLSSKYSVIA*ESPITELPSTNAGTNFIGLSLTNSGSDCSPLRRFTALYS*ST 99
GYLSS+Y+ IA*ESPI ST AGT+FIGLS NSGSDCSPLRR TALYS*S
Sbjct: 293 GKRGR*GYLSSRYNAIA*ESPIIASQSTQAGTSFIGLSFMNSGSDCSPLRRLTALYS*SM 114
Query: 98 PLRLRAMRARWEHELRQYEYSISRPTVASTSA 3
PLRL AMR RWE +LRQYEY+I R AS A
Sbjct: 113 PLRLSAMRTRWEQDLRQYEYTIGRAAGASAEA 18
Score = 152 bits (326), Expect = 3e-036
Identities = 74/151 (49%), Positives = 92/151 (60%)
Frame = -2 / -2
Query: 453 VLNSCETSLDLLLSPQHTLPCTNLLVNEPQHCEVMERLNTRSYNACNLVIQSFXXXXXXX 274
VLNSC TS++LLL P+ L C++L +NE E+++RLNTR+ NAC L IQ
Sbjct: 468 VLNSCATSINLLLDPREALSCSDLXLNESHQGEIVKRLNTRARNACYLDIQGLLFKVLGQ 289
Query: 273 XXXXXXXXLQIQCYRVRVTYYRTAINQRRDELHRIKLDEFWIRLLALEKVHRLVLVIHTF 94
LQIQCY V V Y ++ RDELHRIKL E IRLLALE+V RLVL+I F
Sbjct: 288 KRALRVLVLQIQCYCVGVADYCVPVDPGRDELHRIKLHELGIRLLALEEVDRLVLIIDAF 109
Query: 93 EIESDAGTVGARAAPVRVQHQSPHRRLHLRH 1
E+E DA VGA +APV V ++ R H
Sbjct: 108 EVERDAYAVGAGSAPV*VHNRPRRWRFSRSH 16
Score = 146 bits (313), Expect = 2e-034
Identities = 74/131 (56%), Positives = 82/131 (62%)
Frame = +3 / +3
Query: 66 PPCPHRSQSQRCGLRVQGGEPSQGRAV*SRIRQA*SYEVRPCVG*WQFCNR*LLRDNTVF 245
PP HR+Q QR L VQGG+P QGRAV*SR+ +A*SYE RPC+G NR LLR++ V
Sbjct: 81 PPRTHRAQPQRHRL*VQGGQPPQGRAV*SRVHEA*SYEARPCLGRLGRNNRRLLRNSIVS 260
Query: 246 GGQVPRASSSTSRPSKESFESPDCKHCSFWYSTSP*PHSVEVH*PEGWCRGECVVDSTTN 425
GGQVP A S RP KE E PD KHC WYSTS H E H* G R E V TT+
Sbjct: 261 GGQVPSAPSFAPRP*KEGPEYPDSKHCVLWYSTSSQSHLGETH*AXGLNRREPPVGPTTD 440
Query: 426 RERFHSY*EPD 458
R HS *E D
Sbjct: 441 **RLHSC*EHD 473
Score = 127 bits (273), Expect = 6e-029
Identities = 72/131 (54%), Positives = 80/131 (61%)
Frame = -1 / -1
Query: 457 SGSQ*L*NLSRFVVESTTHSPLHQPSGQ*TSTL*GYGEVEYQKLQCLQSGDSKLSFEGLE 278
S SQ L NL + VV T S L +P Q* S * EVEYQ QCL SG S SF+GL
Sbjct: 472 SCSQQLCNLYQSVVGPTGGSLLFRPXAQ*VSPR*DCEEVEYQSTQCLLSGYSGPSFQGLG 293
Query: 277 VEEEALGTCPPNTVLSRKSHLLQNCHQPTQGRTS*D*A*RILDQTARP*EGSPPCTRNPH 98
+E A GTCPP+T+L R+S L +P QGR S*D*A DQTARP* G PPCT N
Sbjct: 292 AKEGAEGTCPPDTMLLRRSRRLLRPSRPRQGRAS*D*AS*TRDQTARP*GG*PPCTHNRC 113
Query: 97 L*D*ERCGHGG 65
L* * RC GG
Sbjct: 112 L*G*ARCVRGG 80
>gb|CA009432.1|CA009432 HU14B18r HU Hordeum vulgare subsp. vulgare cDNA clone HU14B18
5-PRIME, mRNA sequence
Length = 474
Score = 265 bits (574), Expect = 2e-070
Identities = 110/134 (82%), Positives = 120/134 (89%)
Frame = +1 / +3
Query: 1 MAEVEATVGRLMLYSYWRSSCSHRARIALNLKGVDYEYKAVNLLKGEQSDPEFVKLNPMK 180
MA EA R +LYSYWRSSCSHR RIALNLKG+DYEYKAVNLLKGEQSDPEF+KLNPMK
Sbjct: 72 MASAEAPAARPILYSYWRSSCSHRVRIALNLKGIDYEYKAVNLLKGEQSDPEFMKLNPMK 251
Query: 181 FVPALVDGSSVIGDSYAITLYLEDKYPEPPLLPQDLQKKALNHQIASIVASGIQPLHNLT 360
FVPA V+G +VIGDSYAI LYLEDKYP+ PLLPQDL+KKALN QIASIV SGIQPLHNLT
Sbjct: 252 FVPAWVNGDAVIGDSYAIALYLEDKYPQRPLLPQDLEKKALNIQIASIVCSGIQPLHNLT 431
Query: 361 VLRFIDQKVGAGES 402
++RFI+QKVG GES
Sbjct: 432 LVRFIEQKVGTGES 473
Score = 198 bits (426), Expect = 5e-050
Identities = 94/133 (70%), Positives = 96/133 (72%)
Frame = -3 / -3
Query: 401 LSPAPTFWSMNLNTVRLWRG*IPEATMLAIW*FKAFFXXXXXXXXXXGYLSSKYSVIA*E 222
LSP PTF SMNL VRL RG*IPE TMLAIW F+AFF GYLSSKY+ IA*E
Sbjct: 472 LSPVPTFCSMNLTKVRL*RG*IPEHTMLAIWIFRAFFSRSWGKRGR*GYLSSKYNAIA*E 293
Query: 221 SPITELPSTNAGTNFIGLSLTNSGSDCSPLRRFTALYS*STPLRLRAMRARWEHELRQYE 42
SPIT P T AGTNFIGLS NSGSDCSPLRR TALYS*S PLRL AMR RWE ELRQYE
Sbjct: 292 SPITASPLTQAGTNFIGLSFMNSGSDCSPLRRLTALYS*SIPLRLSAMRTRWEQELRQYE 113
Query: 41 YSISRPTVASTSA 3
I R AS A
Sbjct: 112 *RIGRAAGASAEA 74
Score = 157 bits (338), Expect = 7e-038
Identities = 73/125 (58%), Positives = 83/125 (66%)
Frame = +3 / +2
Query: 27 ATDXXXXXXXXXXPPCPHRSQSQRCGLRVQGGEPSQGRAV*SRIRQA*SYEVRPCVG*WQ 206
A D PP PHR+Q QR L VQGG+P QGRAV*SR+ +A*SYEVRPC+G +
Sbjct: 98 AADSLLVLAQLLLPPRPHRAQPQRYRL*VQGGQPPQGRAV*SRVHEA*SYEVRPCLGQRR 277
Query: 207 FCNR*LLRDNTVFGGQVPRASSSTSRPSKESFESPDCKHCSFWYSTSP*PHSVEVH*PEG 386
NR*LLR++ VFGGQVP A S RP KE E PD KHC FWYSTS H E+H* +G
Sbjct: 278 RSNR*LLRNSIVFGGQVPSAPSFAPRP*KEGPEYPDSKHCVFWYSTSSQSHLGEIH*AKG 457
Query: 387 WCRGE 401
RGE
Sbjct: 458 RNRGE 472
Score = 156 bits (336), Expect = 1e-037
Identities = 73/133 (54%), Positives = 89/133 (66%)
Frame = -2 / -2
Query: 399 LPCTNLLVNEPQHCEVMERLNTRSYNACNLVIQSFXXXXXXXXXXXXXXXLQIQCYRVRV 220
LPC++LL+NE E+++RLNTR++NAC L IQ LQIQCY VRV
Sbjct: 470 LPCSDLLLNESHQGEIVKRLNTRTHNACYLDIQGLLFKVLGQKRALRVLVLQIQCYCVRV 291
Query: 219 TYYRTAINQRRDELHRIKLDEFWIRLLALEKVHRLVLVIHTFEIESDAGTVGARAAPVRV 40
T Y A++ RDELHRIKL E IRLLALE+V RLVL+I TFE+E DA VGA AAPVRV
Sbjct: 290 TDYCVAVDPGRDELHRIKLHELGIRLLALEEVDRLVLIIDTFEVERDADAVGAGAAPVRV 111
Query: 39 QHQSPHRRLHLRH 1
+++ RRL H
Sbjct: 110 ENRPRRRRLRRSH 72
Score = 136 bits (292), Expect = 1e-031
Identities = 69/112 (61%), Positives = 74/112 (66%)
Frame = -1 / -1
Query: 400 SPLHQPSGQ*TSTL*GYGEVEYQKLQCLQSGDSKLSFEGLEVEEEALGTCPPNTVLSRKS 221
SPL +P Q* S * EVEYQ QCL SG S SF+GL +E A GTCPPNT+L RKS
Sbjct: 471 SPLFRPFAQ*ISPR*DCEEVEYQNTQCLLSGYSGPSFQGLGAKEGAEGTCPPNTMLLRKS 292
Query: 220 HLLQNCHQPTQGRTS*D*A*RILDQTARP*EGSPPCTRNPHL*D*ERCGHGG 65
H L P QGRTS*D*A DQTARP* G PPCT N +L* * RCG GG
Sbjct: 291 HRLLRRR*PRQGRTS*D*AS*TRDQTARP*GG*PPCTHNRYL*G*ARCGRGG 136
>gb|CA014931.1|CA014931 HT12M06r HT Hordeum vulgare subsp. vulgare cDNA clone HT12M06
5-PRIME, mRNA sequence
Length = 643
Score = 131 bits (280), Expect(3) = 3e-070
Identities = 53/106 (50%), Positives = 79/106 (74%)
Frame = +1 / +2
Query: 142 QSDPEFVKLNPMKFVPALVDGSSVIGDSYAITLYLEDKYPEPPLLPQDLQKKALNHQIAS 321
++DP++ K+NP+K++PALVDG V+ DS AI LYLEDKYP+ PL+P+D++ KAL+ QIA+
Sbjct: 101 RTDPDYEKINPIKYIPALVDGDFVLSDSLAIILYLEDKYPQHPLMPKDIKMKALDLQIAN 280
Query: 322 IVASGIQPLHNLTVLRFIDQKVGAGESVLWTQQQIERGFTAIENLI 459
IV S IQPL V+ + ++ + ES+ Q+ I++GF AIE L+
Sbjct: 281 IVCSSIQPLQGYGVIGLHEGRLSSDESLEVVQRYIDKGFRAIEKLL 418
Score = 107 bits (228), Expect(3) = 3e-070
Identities = 45/69 (65%), Positives = 50/69 (72%)
Frame = +1 / +2
Query: 463 LKGCAGKYATGDEVQLADVFLAPQIYAAIERTKIDMSNYPTLARLHSEYMSHPAFEAALP 642
L GC KY GDEV L DVFLAPQI+AAI R +IDM+ YP L RLH YM PAF+AALP
Sbjct: 416 LDGCDSKYCVGDEVHLGDVFLAPQIHAAINRFQIDMTKYPILWRLHDAYMEIPAFQAALP 595
Query: 643 GKQPDAPSS 669
Q DAPS+
Sbjct: 596 QNQQDAPSA 622
Score = 75.8 bits (159), Expect(4) = 1e-034
Identities = 38/66 (57%), Positives = 43/66 (65%)
Frame = -3 / -2
Query: 665 EGASGCLPGSAASNAGCDMYSEWSLARVG*FDMSILVRSMAA*IWGARNTSASWTSSPVA 486
EGAS GSAA NAG MY+ S ++G F +SI R MAA*I GARNTS WTSSP
Sbjct: 618 EGASC*FWGSAA*NAGISMYAS*SRHKIGYFVISIWKRLMAA*ICGARNTSPKWTSSPTQ 439
Query: 485 YFPAHP 468
Y +HP
Sbjct: 438 YLLSHP 421
Score = 66.1 bits (138), Expect(3) = 3e-070
Identities = 26/31 (83%), Positives = 27/31 (87%)
Frame = +1 / +2
Query: 34 MLYSYWRSSCSHRARIALNLKGVDYEYKAVN 126
+LY W SSCSHR RIALNLKGVDYEYKAVN
Sbjct: 5 ILYGAWISSCSHRVRIALNLKGVDYEYKAVN 97
Score = 57.9 bits (120), Expect(4) = 1e-034
Identities = 33/68 (48%), Positives = 39/68 (57%)
Frame = -3 / -2
Query: 350 WRG*IPEATMLAIW*FKAFFXXXXXXXXXXGYLSSKYSVIA*ESPITELPSTNAGTNFIG 171
WRG + E TM AI +AF GYLSS+Y +IA ES T+ PSTNAG IG
Sbjct: 309 WRGWMLEQTMFAI*RSRAFILISLGMRGC*GYLSSRYKMIARESDRTKSPSTNAGMYLIG 130
Query: 170 LSLTNSGS 147
L + SGS
Sbjct: 129 LIFS*SGS 106
Score = 46.0 bits (94), Expect(4) = 1e-034
Identities = 22/32 (68%), Positives = 24/32 (75%)
Frame = -3 / -2
Query: 134 LRRFTALYS*STPLRLRAMRARWEHELRQYEY 39
+R TALYS*STPLRLRA+R R E EL Q Y
Sbjct: 105 VRGLTALYS*STPLRLRAIRTR*EQELIQAPY 10
Score = 22.6 bits (43), Expect(4) = 1e-034
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = -3 / -2
Query: 452 FSIAVKPLSI 423
FSIA+KPLSI
Sbjct: 411 FSIALKPLSI 382
>gb|CA003108.1|CA003108 HS09G23r HS Hordeum vulgare subsp. vulgare cDNA clone HS09G23
5-PRIME, mRNA sequence
Length = 413
Score = 264 bits (570), Expect = 7e-070
Identities = 109/133 (81%), Positives = 119/133 (89%)
Frame = +1 / +3
Query: 1 MAEVEATVGRLMLYSYWRSSCSHRARIALNLKGVDYEYKAVNLLKGEQSDPEFVKLNPMK 180
MA EA R +LYSYWRSSCSHR RIALNLKG+DYEYKAVNLLKGEQSDPEF+KLNPMK
Sbjct: 15 MASAEAPAARPILYSYWRSSCSHRVRIALNLKGIDYEYKAVNLLKGEQSDPEFMKLNPMK 194
Query: 181 FVPALVDGSSVIGDSYAITLYLEDKYPEPPLLPQDLQKKALNHQIASIVASGIQPLHNLT 360
FVPA V+G +VIGDSYAI LYLEDKYP+ PLLPQDL+KKALN QIASIV SGIQPLHNLT
Sbjct: 195 FVPAWVNGDAVIGDSYAIALYLEDKYPQRPLLPQDLEKKALNIQIASIVCSGIQPLHNLT 374
Query: 361 VLRFIDQKVGAGE 399
++RFI+QKVG GE
Sbjct: 375 LVRFIEQKVGTGE 413
Score = 196 bits (422), Expect = 2e-049
Identities = 93/132 (70%), Positives = 95/132 (71%)
Frame = -3 / -2
Query: 398 SPAPTFWSMNLNTVRLWRG*IPEATMLAIW*FKAFFXXXXXXXXXXGYLSSKYSVIA*ES 219
SP PTF SMNL VRL RG*IPE TMLAIW F+AFF GYLSSKY+ IA*ES
Sbjct: 412 SPVPTFCSMNLTKVRL*RG*IPEHTMLAIWIFRAFFSRSWGKRGR*GYLSSKYNAIA*ES 233
Query: 218 PITELPSTNAGTNFIGLSLTNSGSDCSPLRRFTALYS*STPLRLRAMRARWEHELRQYEY 39
PIT P T AGTNFIGLS NSGSDCSPLRR TALYS*S PLRL AMR RWE ELRQYE
Sbjct: 232 PITASPLTQAGTNFIGLSFMNSGSDCSPLRRLTALYS*SIPLRLSAMRTRWEQELRQYE* 53
Query: 38 SISRPTVASTSA 3
I R AS A
Sbjct: 52 RIGRAAGASAEA 17
Score = 156 bits (336), Expect = 1e-037
Identities = 73/133 (54%), Positives = 89/133 (66%)
Frame = -2 / -1
Query: 399 LPCTNLLVNEPQHCEVMERLNTRSYNACNLVIQSFXXXXXXXXXXXXXXXLQIQCYRVRV 220
LPC++LL+NE E+++RLNTR++NAC L IQ LQIQCY VRV
Sbjct: 413 LPCSDLLLNESHQGEIVKRLNTRTHNACYLDIQGLLFKVLGQKRALRVLVLQIQCYCVRV 234
Query: 219 TYYRTAINQRRDELHRIKLDEFWIRLLALEKVHRLVLVIHTFEIESDAGTVGARAAPVRV 40
T Y A++ RDELHRIKL E IRLLALE+V RLVL+I TFE+E DA VGA AAPVRV
Sbjct: 233 TDYCVAVDPGRDELHRIKLHELGIRLLALEEVDRLVLIIDTFEVERDADAVGAGAAPVRV 54
Query: 39 QHQSPHRRLHLRH 1
+++ RRL H
Sbjct: 53 ENRPRRRRLRRSH 15
Score = 155 bits (333), Expect = 3e-037
Identities = 72/124 (58%), Positives = 82/124 (66%)
Frame = +3 / +2
Query: 27 ATDXXXXXXXXXXPPCPHRSQSQRCGLRVQGGEPSQGRAV*SRIRQA*SYEVRPCVG*WQ 206
A D PP PHR+Q QR L VQGG+P QGRAV*SR+ +A*SYEVRPC+G +
Sbjct: 41 AADSLLVLAQLLLPPRPHRAQPQRYRL*VQGGQPPQGRAV*SRVHEA*SYEVRPCLGQRR 220
Query: 207 FCNR*LLRDNTVFGGQVPRASSSTSRPSKESFESPDCKHCSFWYSTSP*PHSVEVH*PEG 386
NR*LLR++ VFGGQVP A S RP KE E PD KHC FWYSTS H E+H* +G
Sbjct: 221 RSNR*LLRNSIVFGGQVPSAPSFAPRP*KEGPEYPDSKHCVFWYSTSSQSHLGEIH*AKG 400
Query: 387 WCRG 398
RG
Sbjct: 401 RNRG 412
Score = 134 bits (288), Expect = 5e-031
Identities = 68/111 (61%), Positives = 73/111 (65%)
Frame = -1 / -3
Query: 397 PLHQPSGQ*TSTL*GYGEVEYQKLQCLQSGDSKLSFEGLEVEEEALGTCPPNTVLSRKSH 218
PL +P Q* S * EVEYQ QCL SG S SF+GL +E A GTCPPNT+L RKSH
Sbjct: 411 PLFRPFAQ*ISPR*DCEEVEYQNTQCLLSGYSGPSFQGLGAKEGAEGTCPPNTMLLRKSH 232
Query: 217 LLQNCHQPTQGRTS*D*A*RILDQTARP*EGSPPCTRNPHL*D*ERCGHGG 65
L P QGRTS*D*A DQTARP* G PPCT N +L* * RCG GG
Sbjct: 231 RLLRRR*PRQGRTS*D*AS*TRDQTARP*GG*PPCTHNRYL*G*ARCGRGG 79
>gb|BJ547046.1|BJ547046 BJ547046 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal37l23 5', mRNA sequence
Length = 688
Score = 131 bits (280), Expect(3) = 2e-067
Identities = 53/106 (50%), Positives = 79/106 (74%)
Frame = +1 / +3
Query: 142 QSDPEFVKLNPMKFVPALVDGSSVIGDSYAITLYLEDKYPEPPLLPQDLQKKALNHQIAS 321
++DP++ K+NP+K++PALVDG V+ DS AI LYLEDKYP+ PL+P+D++ KAL+ QIA+
Sbjct: 186 RTDPDYEKINPIKYIPALVDGDFVLSDSLAIILYLEDKYPQHPLMPKDIKMKALDLQIAN 365
Query: 322 IVASGIQPLHNLTVLRFIDQKVGAGESVLWTQQQIERGFTAIENLI 459
IV S IQPL V+ + ++ + ES+ Q+ I++GF AIE L+
Sbjct: 366 IVCSSIQPLQGYGVIGLHEGRLSSDESLEVVQRYIDKGFRAIEKLL 503
Score = 97.7 bits (207), Expect(3) = 2e-067
Identities = 40/60 (66%), Positives = 45/60 (75%)
Frame = +1 / +3
Query: 463 LKGCAGKYATGDEVQLADVFLAPQIYAAIERTKIDMSNYPTLARLHSEYMSHPAFEAALP 642
L GC KY GDEV L DVFLAPQI+AAI R +IDM+ YP L+RLH YM PAF+AALP
Sbjct: 501 LDGCDSKYCVGDEVHLGDVFLAPQIHAAINRFQIDMTKYPILSRLHDVYMEIPAFQAALP 680
Score = 72.1 bits (151), Expect(4) = 2e-033
Identities = 34/58 (58%), Positives = 39/58 (67%)
Frame = -3 / -1
Query: 641 GSAASNAGCDMYSEWSLARVG*FDMSILVRSMAA*IWGARNTSASWTSSPVAYFPAHP 468
GSAA NAG MY+ S ++G F +SI R MAA*I GARNTS WTSSP Y +HP
Sbjct: 679 GSAA*NAGISMYTS*SRDKIGYFVISIWKRLMAA*ICGARNTSPKWTSSPTQYLLSHP 506
Score = 66.1 bits (138), Expect(3) = 2e-067
Identities = 26/31 (83%), Positives = 27/31 (87%)
Frame = +1 / +3
Query: 34 MLYSYWRSSCSHRARIALNLKGVDYEYKAVN 126
+LY W SSCSHR RIALNLKGVDYEYKAVN
Sbjct: 90 ILYGAWISSCSHRVRIALNLKGVDYEYKAVN 182
Score = 57.9 bits (120), Expect(4) = 2e-033
Identities = 33/68 (48%), Positives = 39/68 (57%)
Frame = -3 / -1
Query: 350 WRG*IPEATMLAIW*FKAFFXXXXXXXXXXGYLSSKYSVIA*ESPITELPSTNAGTNFIG 171
WRG + E TM AI +AF GYLSS+Y +IA ES T+ PSTNAG IG
Sbjct: 394 WRGWMLEQTMFAI*RSRAFILISLGMRGC*GYLSSRYKMIARESDRTKSPSTNAGMYLIG 215
Query: 170 LSLTNSGS 147
L + SGS
Sbjct: 214 LIFS*SGS 191
Score = 46.0 bits (94), Expect(4) = 2e-033
Identities = 22/32 (68%), Positives = 24/32 (75%)
Frame = -3 / -1
Query: 134 LRRFTALYS*STPLRLRAMRARWEHELRQYEY 39
+R TALYS*STPLRLRA+R R E EL Q Y
Sbjct: 190 VRGLTALYS*STPLRLRAIRTR*EQELIQAPY 95
Score = 22.6 bits (43), Expect(4) = 2e-033
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = -3 / -1
Query: 452 FSIAVKPLSI 423
FSIA+KPLSI
Sbjct: 496 FSIALKPLSI 467
>gb|BE455419.2|BE455419 HVSMEg0017A13f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0017A13f, mRNA sequence
Length = 587
Score = 140 bits (301), Expect(2) = 2e-066
Identities = 56/71 (78%), Positives = 65/71 (91%)
Frame = +1 / +2
Query: 463 LKGCAGKYATGDEVQLADVFLAPQIYAAIERTKIDMSNYPTLARLHSEYMSHPAFEAALP 642
+KGCAGK+A GDEVQLADVFLAPQI+AA+ R +IDMS YPTLARLH +YM+HPAFEAALP
Sbjct: 203 IKGCAGKFAMGDEVQLADVFLAPQIFAAVTRFQIDMSKYPTLARLHDQYMTHPAFEAALP 382
Query: 643 GKQPDAPSSS* 675
+QPDAPSS+*
Sbjct: 383 DRQPDAPSSA* 415
Score = 132 bits (283), Expect(2) = 2e-066
Identities = 53/69 (76%), Positives = 63/69 (91%)
Frame = +1 / +2
Query: 256 YPEPPLLPQDLQKKALNHQIASIVASGIQPLHNLTVLRFIDQKVGAGESVLWTQQQIERG 435
YP+ PLLPQDL+KKALN QIASIV SGIQPLHNLT++RFI+QKVG GES+ W QQQI+RG
Sbjct: 2 YPQRPLLPQDLEKKALNIQIASIVCSGIQPLHNLTLVRFIEQKVGTGESLPWVQQQIDRG 181
Query: 436 FTAIENLIQ 462
FTA+EN+I+
Sbjct: 182 FTAVENMIK 208
Score = 118 bits (253), Expect(2) = 9e-049
Identities = 51/67 (76%), Positives = 54/67 (80%)
Frame = -3 / -3
Query: 668 DEGASGCLPGSAASNAGCDMYSEWSLARVG*FDMSILVRSMAA*IWGARNTSASWTSSPV 489
+EGASGC GSAASNAGC +Y WSLARVG FDMSI R AA IWGARNTSASWTSSP+
Sbjct: 408 EEGASGCRSGSAASNAGCVIY*SWSLARVGYFDMSI*KRVTAAKIWGARNTSASWTSSPI 229
Query: 488 AYFPAHP 468
A FPA P
Sbjct: 228 ANFPAQP 208
Score = 95.5 bits (202), Expect(2) = 9e-049
Identities = 42/56 (75%), Positives = 43/56 (76%)
Frame = -3 / -3
Query: 458 IRFSIAVKPLSICC*VHNTLSPAPTFWSMNLNTVRLWRG*IPEATMLAIW*FKAFF 291
I FS AVKPLSICC H LSP PTF SMNL VRL RG*IPE TMLAIW F+AFF
Sbjct: 204 IMFSTAVKPLSICCWTHGRLSPVPTFCSMNLTKVRL*RG*IPEHTMLAIWIFRAFF 37
Score = 79.4 bits (167), Expect(2) = 4e-030
Identities = 31/51 (60%), Positives = 42/51 (82%)
Frame = -2 / -2
Query: 453 VLNSCETSLDLLLSPQHTLPCTNLLVNEPQHCEVMERLNTRSYNACNLVIQ 301
VLNSCETS++LLL P+ LPC++LL+NE E+++RLNTR++NAC L IQ
Sbjct: 199 VLNSCETSINLLLDPREALPCSDLLLNESHQGEIVKRLNTRTHNACYLDIQ 47
Score = 77.1 bits (162), Expect(2) = 9e-031
Identities = 36/70 (51%), Positives = 44/70 (62%)
Frame = +3 / +1
Query: 465 KRMRREVCNRR*SPTGRCIPCTPDLCSH*TH*N*HVKLPHSC*APLGVHVTPCV*SSAPW 644
+R+ EVC R*SPTGR IPCTPD C + N HV++ H AP V+ TPC+*S AP
Sbjct: 205 QRLCWEVCYGR*SPTGRRIPCTPDFCCSDSFSNRHVEISHPREAPRSVYDTPCI*SCAP* 384
Query: 645 QATGRPFILL 674
A PF+ L
Sbjct: 385 PAARCPFLCL 414
Score = 76.7 bits (161), Expect(2) = 9e-031
Identities = 38/68 (55%), Positives = 41/68 (60%)
Frame = +3 / +1
Query: 255 VPRASSSTSRPSKESFESPDCKHCSFWYSTSP*PHSVEVH*PEGWCRGECVVDSTTNRER 434
VP A S RP KE E PD KHC FWYSTS H E+H* +G RGE V TT+ R
Sbjct: 1 VPSAPSFAPRP*KEGPEYPDSKHCVFWYSTSSQSHLGEIH*AKGRNRGEPPVGPTTD**R 180
Query: 435 FHSY*EPD 458
FHS *E D
Sbjct: 181 FHSC*EHD 204
Score = 72.1 bits (151), Expect(2) = 4e-030
Identities = 37/76 (48%), Positives = 44/76 (57%)
Frame = -1 / -1
Query: 694 TH*GAVPRRMKGRPVACQGALLQTQGVTCTPSGA*QEWGSLTCQF*CVQWLHRSGVQGIH 515
TH + R+ KG A QGA LQ QGV+ T GA + W TC+F +SGVQGI
Sbjct: 434 THPRPMSRQRKGHRAAGQGAQLQMQGVSYTDRGASRGWDISTCRFENESLQQKSGVQGIR 255
Query: 514 LPVGLHLLLHTSRRIL 467
LPVGLHL TS+ L
Sbjct: 254 LPVGLHLP*QTSQHSL 207
Score = 70.7 bits (148), Expect(2) = 8e-024
Identities = 30/58 (51%), Positives = 38/58 (65%)
Frame = -2 / -2
Query: 639 ERCFKRRV*HVLRVEPSKSGVV*HVNFSAFNGCIDLGCKEYICQLDFISCCILPGASF 466
ER FK RV H+L VEP + G+ HV+ + +LGCKEY+CQLDFIS LP +F
Sbjct: 379 ERSFKCRVCHILIVEPREGGIFRHVDLKTSHCSKNLGCKEYVCQLDFISHSKLPSTAF 206
Score = 59.7 bits (124), Expect(2) = 8e-024
Identities = 36/67 (53%), Positives = 40/67 (59%)
Frame = -1 / -1
Query: 457 SGSQ*L*NLSRFVVESTTHSPLHQPSGQ*TSTL*GYGEVEYQKLQCLQSGDSKLSFEGLE 278
S SQ L*NL + VV T SPL +P Q* S * EVEYQ QCL SG S SF+GL
Sbjct: 203 SCSQQL*NLYQSVVGPTGGSPLFRPFAQ*ISPR*DCEEVEYQNTQCLLSGYSGPSFQGLG 24
Query: 277 VEEEALG 257
+E A G
Sbjct: 23 AKEGAEG 3
>gb|CA032242.1|CA032242 HX12H05r HX Hordeum vulgare subsp. vulgare cDNA clone HX12H05
5-PRIME, mRNA sequence
Length = 654
Score = 131 bits (280), Expect(3) = 1e-059
Identities = 53/106 (50%), Positives = 79/106 (74%)
Frame = +1 / +3
Query: 142 QSDPEFVKLNPMKFVPALVDGSSVIGDSYAITLYLEDKYPEPPLLPQDLQKKALNHQIAS 321
++DP++ K+NP+K++PALVDG V+ DS AI LYLEDKYP+ PL+P+D++ KAL+ QIA+
Sbjct: 204 RTDPDYEKINPIKYIPALVDGDFVLSDSLAIILYLEDKYPQHPLMPKDIKMKALDLQIAN 383
Query: 322 IVASGIQPLHNLTVLRFIDQKVGAGESVLWTQQQIERGFTAIENLI 459
IV S IQPL V+ + ++ + ES+ Q+ I++GF AIE L+
Sbjct: 384 IVCSSIQPLQGYGVIGLHEGRLSSDESLEVVQRYIDKGFRAIEKLL 521
Score = 71.6 bits (150), Expect(3) = 1e-059
Identities = 30/45 (66%), Positives = 33/45 (73%)
Frame = +1 / +3
Query: 463 LKGCAGKYATGDEVQLADVFLAPQIYAAIERTKIDMSNYPTLARL 597
L GC KY GDEV L DVFLAPQI+AAI R +IDM+ YP L RL
Sbjct: 519 LDGCDSKYCVGDEVHLGDVFLAPQIHAAINRFQIDMTKYPILWRL 653
Score = 66.1 bits (138), Expect(3) = 1e-059
Identities = 26/31 (83%), Positives = 27/31 (87%)
Frame = +1 / +3
Query: 34 MLYSYWRSSCSHRARIALNLKGVDYEYKAVN 126
+LY W SSCSHR RIALNLKGVDYEYKAVN
Sbjct: 108 ILYGAWISSCSHRVRIALNLKGVDYEYKAVN 200
Score = 57.9 bits (120), Expect(4) = 2e-028
Identities = 33/68 (48%), Positives = 39/68 (57%)
Frame = -3 / -3
Query: 350 WRG*IPEATMLAIW*FKAFFXXXXXXXXXXGYLSSKYSVIA*ESPITELPSTNAGTNFIG 171
WRG + E TM AI +AF GYLSS+Y +IA ES T+ PSTNAG IG
Sbjct: 412 WRGWMLEQTMFAI*RSRAFILISLGMRGC*GYLSSRYKMIARESDRTKSPSTNAGMYLIG 233
Query: 170 LSLTNSGS 147
L + SGS
Sbjct: 232 LIFS*SGS 209
Score = 54.7 bits (113), Expect(4) = 2e-028
Identities = 24/40 (60%), Positives = 28/40 (70%)
Frame = -3 / -3
Query: 587 RVG*FDMSILVRSMAA*IWGARNTSASWTSSPVAYFPAHP 468
++G F +SI R MAA*I GARNTS WTSSP Y +HP
Sbjct: 643 KIGYFVISIWKRLMAA*ICGARNTSPKWTSSPTQYLLSHP 524
Score = 46.0 bits (94), Expect(4) = 2e-028
Identities = 22/32 (68%), Positives = 24/32 (75%)
Frame = -3 / -3
Query: 134 LRRFTALYS*STPLRLRAMRARWEHELRQYEY 39
+R TALYS*STPLRLRA+R R E EL Q Y
Sbjct: 208 VRGLTALYS*STPLRLRAIRTR*EQELIQAPY 113
Score = 22.6 bits (43), Expect(4) = 2e-028
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = -3 / -3
Query: 452 FSIAVKPLSI 423
FSIA+KPLSI
Sbjct: 514 FSIALKPLSI 485
>gb|AV912761.1|AV912761 AV912761 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags10c10 5', mRNA sequence
Length = 634
Score = 136 bits (292), Expect(4) = 7e-059
Identities = 57/106 (53%), Positives = 78/106 (73%)
Frame = +1 / +2
Query: 145 SDPEFVKLNPMKFVPALVDGSSVIGDSYAITLYLEDKYPEPPLLPQDLQKKALNHQIASI 324
+DP++ K+NP+K+VPAL DG ++ DS AI LYLEDKYP PLLPQDL++KALN QIA+I
Sbjct: 137 NDPDYEKINPIKYVPALQDGDILVSDSLAIILYLEDKYPLHPLLPQDLKRKALNLQIANI 316
Query: 325 VASGIQPLHNLTVLRFIDQKVGAGESVLWTQQQIERGFTAIENLIQ 462
V S IQPL V+ ++ K+G+ ES+ I++GF AIE L++
Sbjct: 317 VCSSIQPLQCYAVVGLVNGKLGSDESLQIVHHYIDKGFRAIEKLLE 454
Score = 63.4 bits (132), Expect(4) = 7e-059
Identities = 26/43 (60%), Positives = 30/43 (69%)
Frame = +1 / +3
Query: 514 DVFLAPQIYAAIERTKIDMSNYPTLARLHSEYMSHPAFEAALP 642
DVFLAPQI+A + R IDMS YP L R + YM PAF+AA P
Sbjct: 501 DVFLAPQIHAGVTRFNIDMSKYPHLERFYKAYMEIPAFQAARP 629
Score = 52.8 bits (109), Expect(4) = 3e-026
Identities = 25/43 (58%), Positives = 30/43 (69%)
Frame = -3 / -1
Query: 641 GSAASNAGCDMYSEWSLARVG*FDMSILVRSMAA*IWGARNTS 513
G AA NAG MY+ +L++ G FDMS+L R A IWGARNTS
Sbjct: 628 GRAA*NAGISMYAL*NLSKCGYFDMSMLKRVTPACIWGARNTS 500
Score = 52.4 bits (108), Expect(4) = 3e-026
Identities = 36/85 (42%), Positives = 43/85 (50%)
Frame = -3 / -2
Query: 401 LSPAPTFWSMNLNTVRLWRG*IPEATMLAIW*FKAFFXXXXXXXXXXGYLSSKYSVIA*E 222
LS P N T RG*+ E TM AI +AF GYLSS+Y++IA E
Sbjct: 393 LSSEPNLPLTNPTTA*H*RG*MLEHTMFAICRLRAFLFRS*GKRGCRGYLSSRYNMIARE 214
Query: 221 SPITELPSTNAGTNFIGLSLTNSGS 147
S PS +AGT IGL + SGS
Sbjct: 213 SETKISPSCSAGTYLIGLIFS*SGS 139
Score = 50.1 bits (103), Expect(4) = 7e-059
Identities = 21/30 (70%), Positives = 25/30 (83%)
Frame = +1 / +2
Query: 34 MLYSYWRSSCSHRARIALNLKGVDYEYKAV 123
+LYS SSCS+R RIAL LKGV+YEY+AV
Sbjct: 41 VLYSAAISSCSYRVRIALTLKGVEYEYRAV 130
Score = 39.6 bits (80), Expect(4) = 3e-026
Identities = 18/23 (78%), Positives = 19/23 (82%)
Frame = -3 / -2
Query: 122 TALYS*STPLRLRAMRARWEHEL 54
TALYS STPLR+RAMR R E EL
Sbjct: 129 TALYSYSTPLRVRAMRTR*EQEL 61
Score = 34.5 bits (69), Expect(4) = 7e-059
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = +1 / +2
Query: 463 LKGCAGKYATGDEVQLA 513
L+GC K+ATGDEVQLA
Sbjct: 449 LEGCNSKFATGDEVQLA 499
Score = 28.6 bits (56), Expect(4) = 3e-026
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = -3 / -2
Query: 512 ASWTSSPVAYFPAHP 468
ASWTSSPVA HP
Sbjct: 498 ASWTSSPVANLLLHP 454
>gb|BQ764866.1|BQ764866 EBca01_SQ005_J02_R carpel, pre-anthesis, no treatment, cv Optic,
EBca01 Hordeum vulgare subsp. vulgare cDNA clone
EBca01_SQ005_J02 5', mRNA sequence
Length = 676
Score = 136 bits (292), Expect(3) = 6e-058
Identities = 57/106 (53%), Positives = 78/106 (73%)
Frame = +1 / +2
Query: 145 SDPEFVKLNPMKFVPALVDGSSVIGDSYAITLYLEDKYPEPPLLPQDLQKKALNHQIASI 324
+DP++ K+NP+K+VPAL DG ++ DS AI LYLEDKYP PLLPQDL++KALN QIA+I
Sbjct: 161 NDPDYEKINPIKYVPALQDGDILVSDSLAIILYLEDKYPLHPLLPQDLKRKALNLQIANI 340
Query: 325 VASGIQPLHNLTVLRFIDQKVGAGESVLWTQQQIERGFTAIENLIQ 462
V S IQPL V+ ++ K+G+ ES+ I++GF AIE L++
Sbjct: 341 VCSSIQPLQCYAVVGLVNGKLGSDESLQIVHHYIDKGFRAIEKLLE 478
Score = 76.7 bits (161), Expect(3) = 6e-058
Identities = 32/67 (47%), Positives = 41/67 (61%)
Frame = +1 / +2
Query: 463 LKGCAGKYATGDEVQLADVFLAPQIYAAIERTKIDMSNYPTLARLHSEYMSHPAFEAALP 642
L+GC K+ATG+EVQLADVFLAPQI+A + R IDMS YP + +P+ + P
Sbjct: 473 LEGCNSKFATGNEVQLADVFLAPQIHAGVTRFNIDMSKYPXFGEILQSIHGNPSVSSRTP 652
Query: 643 GKQPDAP 663
K P
Sbjct: 653 *KPARRP 673
Score = 58.8 bits (122), Expect(4) = 2e-028
Identities = 26/38 (68%), Positives = 27/38 (71%)
Frame = -3 / -2
Query: 581 G*FDMSILVRSMAA*IWGARNTSASWTSSPVAYFPAHP 468
G FDMS+L R A IWGARNTSASWTS PVA HP
Sbjct: 591 GYFDMSMLKRVTPACIWGARNTSASWTSFPVANLLLHP 478
Score = 52.4 bits (108), Expect(4) = 2e-028
Identities = 36/85 (42%), Positives = 43/85 (50%)
Frame = -3 / -2
Query: 401 LSPAPTFWSMNLNTVRLWRG*IPEATMLAIW*FKAFFXXXXXXXXXXGYLSSKYSVIA*E 222
LS P N T RG*+ E TM AI +AF GYLSS+Y++IA E
Sbjct: 417 LSSEPNLPLTNPTTA*H*RG*MLEHTMFAICRLRAFLFRS*GKRGCRGYLSSRYNMIARE 238
Query: 221 SPITELPSTNAGTNFIGLSLTNSGS 147
S PS +AGT IGL + SGS
Sbjct: 237 SETKISPSCSAGTYLIGLIFS*SGS 163
Score = 50.1 bits (103), Expect(3) = 6e-058
Identities = 21/30 (70%), Positives = 25/30 (83%)
Frame = +1 / +2
Query: 34 MLYSYWRSSCSHRARIALNLKGVDYEYKAV 123
+LYS SSCS+R RIAL LKGV+YEY+AV
Sbjct: 65 VLYSAAISSCSYRVRIALTLKGVEYEYRAV 154
Score = 39.6 bits (80), Expect(4) = 2e-028
Identities = 18/23 (78%), Positives = 19/23 (82%)
Frame = -3 / -2
Query: 122 TALYS*STPLRLRAMRARWEHEL 54
TALYS STPLR+RAMR R E EL
Sbjct: 153 TALYSYSTPLRVRAMRTR*EQEL 85
Score = 30.4 bits (60), Expect(4) = 2e-028
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = -3 / -1
Query: 665 EGASGCLPGSAASNAGCDMYSEWSLAR 585
EGASG G AA NAG MY+ +L++
Sbjct: 676 EGASGWFSGRAA*NAGISMYAL*NLSK 596
>gb|CA016359.1|CA016359 HV09D16u HV Hordeum vulgare subsp. vulgare cDNA clone HV09D16
3-PRIME, mRNA sequence
Length = 533
Score = 140 bits (301), Expect(2) = 8e-058
Identities = 56/71 (78%), Positives = 65/71 (91%)
Frame = +1 / -2
Query: 463 LKGCAGKYATGDEVQLADVFLAPQIYAAIERTKIDMSNYPTLARLHSEYMSHPAFEAALP 642
+KGCAGK+A GDEVQLADVFLAPQI+AA+ R +IDMS YPTLARLH +YM+HPAFEAALP
Sbjct: 373 IKGCAGKFAMGDEVQLADVFLAPQIFAAVTRFQIDMSKYPTLARLHDQYMTHPAFEAALP 194
Query: 643 GKQPDAPSSS* 675
+QPDAPSS+*
Sbjct: 193 DRQPDAPSSA* 161
Score = 118 bits (253), Expect(2) = 4e-047
Identities = 51/67 (76%), Positives = 54/67 (80%)
Frame = -3 / +3
Query: 668 DEGASGCLPGSAASNAGCDMYSEWSLARVG*FDMSILVRSMAA*IWGARNTSASWTSSPV 489
+EGASGC GSAASNAGC +Y WSLARVG FDMSI R AA IWGARNTSASWTSSP+
Sbjct: 168 EEGASGCRSGSAASNAGCVIY*SWSLARVGYFDMSI*KRVTAAKIWGARNTSASWTSSPI 347
Query: 488 AYFPAHP 468
A FPA P
Sbjct: 348 ANFPAQP 368
Score = 103 bits (220), Expect(2) = 8e-058
Identities = 42/55 (76%), Positives = 50/55 (90%)
Frame = +1 / -2
Query: 298 ALNHQIASIVASGIQPLHNLTVLRFIDQKVGAGESVLWTQQQIERGFTAIENLIQ 462
ALN QIASIV SGIQPLHNLT++RFI+QKVG GES+ W QQQI+RGFTA+EN+I+
Sbjct: 532 ALNIQIASIVCSGIQPLHNLTLVRFIEQKVGTGESLPWVQQQIDRGFTAVENMIK 368
Score = 90.0 bits (190), Expect(2) = 4e-047
Identities = 40/54 (74%), Positives = 41/54 (75%)
Frame = -3 / +3
Query: 458 IRFSIAVKPLSICC*VHNTLSPAPTFWSMNLNTVRLWRG*IPEATMLAIW*FKA 297
I FS AVKPLSICC H LSP PTF SMNL VRL RG*IPE TMLAIW F+A
Sbjct: 372 IMFSTAVKPLSICCWTHGRLSPVPTFCSMNLTKVRL*RG*IPEHTMLAIWIFRA 533
Score = 79.4 bits (167), Expect(2) = 4e-030
Identities = 31/51 (60%), Positives = 42/51 (82%)
Frame = -2 / +2
Query: 453 VLNSCETSLDLLLSPQHTLPCTNLLVNEPQHCEVMERLNTRSYNACNLVIQ 301
VLNSCETS++LLL P+ LPC++LL+NE E+++RLNTR++NAC L IQ
Sbjct: 377 VLNSCETSINLLLDPREALPCSDLLLNESHQGEIVKRLNTRTHNACYLDIQ 529
Score = 77.1 bits (162), Expect(2) = 6e-027
Identities = 36/70 (51%), Positives = 44/70 (62%)
Frame = +3 / -1
Query: 465 KRMRREVCNRR*SPTGRCIPCTPDLCSH*TH*N*HVKLPHSC*APLGVHVTPCV*SSAPW 644
+R+ EVC R*SPTGR IPCTPD C + N HV++ H AP V+ TPC+*S AP
Sbjct: 371 QRLCWEVCYGR*SPTGRRIPCTPDFCCSDSFSNRHVEISHPREAPRSVYDTPCI*SCAP* 192
Query: 645 QATGRPFILL 674
A PF+ L
Sbjct: 191 PAARCPFLCL 162
Score = 72.1 bits (151), Expect(2) = 4e-030
Identities = 37/76 (48%), Positives = 44/76 (57%)
Frame = -1 / +1
Query: 694 TH*GAVPRRMKGRPVACQGALLQTQGVTCTPSGA*QEWGSLTCQF*CVQWLHRSGVQGIH 515
TH + R+ KG A QGA LQ QGV+ T GA + W TC+F +SGVQGI
Sbjct: 142 THPRPMSRQRKGHRAAGQGAQLQMQGVSYTDRGASRGWDISTCRFENESLQQKSGVQGIR 321
Query: 514 LPVGLHLLLHTSRRIL 467
LPVGLHL TS+ L
Sbjct: 322 LPVGLHLP*QTSQHSL 369
Score = 63.8 bits (133), Expect(2) = 6e-027
Identities = 30/52 (57%), Positives = 33/52 (63%)
Frame = +3 / -1
Query: 303 ESPDCKHCSFWYSTSP*PHSVEVH*PEGWCRGECVVDSTTNRERFHSY*EPD 458
E PD KHC FWYSTS H E+H* +G RGE V TT+ RFHS *E D
Sbjct: 527 EYPDSKHCVFWYSTSSQSHLGEIH*AKGRNRGEPPVGPTTD**RFHSC*EHD 372
>gb|BG415780.1|BG415780 HVSMEk0007M14f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0007M14f, mRNA sequence
Length = 671
Score = 130 bits (279), Expect(3) = 8e-058
Identities = 53/105 (50%), Positives = 80/105 (76%)
Frame = +1 / +1
Query: 142 QSDPEFVKLNPMKFVPALVDGSSVIGDSYAITLYLEDKYPEPPLLPQDLQKKALNHQIAS 321
++DP++ K+NP+K++PALVDG V+ DS AI LYLEDKYP+ PL+P+D++ KAL+ QIA+
Sbjct: 232 RTDPDYEKINPIKYIPALVDGDFVLSDSLAIILYLEDKYPQHPLMPKDIKMKALDLQIAN 411
Query: 322 IVASGIQPLHNLTVLRFIDQKVGAGESVLWTQQQIERGFTAIENL 456
IV S IQPL + V+ + ++ + ES+ Q+ I++GF AIE+L
Sbjct: 412 IVCSSIQPLQSYGVIGLHEGRLSSHESLEVVQRYIDKGFRAIESL 546
Score = 66.1 bits (138), Expect(3) = 8e-058
Identities = 26/40 (65%), Positives = 30/40 (75%)
Frame = +1 / +3
Query: 463 LKGCAGKYATGDEVQLADVFLAPQIYAAIERTKIDMSNYP 582
L GC KY GDEV L DV+LAPQI+AAI R +IDM+ YP
Sbjct: 546 LDGCDSKYCVGDEVHLRDVYLAPQIHAAINRLQIDMNKYP 665
Score = 66.1 bits (138), Expect(3) = 8e-058
Identities = 26/31 (83%), Positives = 27/31 (87%)
Frame = +1 / +1
Query: 34 MLYSYWRSSCSHRARIALNLKGVDYEYKAVN 126
+LY W SSCSHR RIALNLKGVDYEYKAVN
Sbjct: 136 ILYGAWISSCSHRVRIALNLKGVDYEYKAVN 228
Score = 59.7 bits (124), Expect(4) = 4e-026
Identities = 34/69 (49%), Positives = 40/69 (57%)
Frame = -3 / -1
Query: 353 LWRG*IPEATMLAIW*FKAFFXXXXXXXXXXGYLSSKYSVIA*ESPITELPSTNAGTNFI 174
LWRG + E TM AI +AF GYLSS+Y +IA ES T+ PSTNAG I
Sbjct: 443 LWRGWMLEQTMFAI*RSRAFILISLGMRGC*GYLSSRYKMIARESDRTKSPSTNAGMYLI 264
Query: 173 GLSLTNSGS 147
GL + SGS
Sbjct: 263 GLIFS*SGS 237
Score = 46.0 bits (94), Expect(4) = 4e-026
Identities = 22/32 (68%), Positives = 24/32 (75%)
Frame = -3 / -1
Query: 134 LRRFTALYS*STPLRLRAMRARWEHELRQYEY 39
+R TALYS*STPLRLRA+R R E EL Q Y
Sbjct: 236 VRGLTALYS*STPLRLRAIRTR*EQELIQAPY 141
Score = 45.1 bits (92), Expect(4) = 4e-026
Identities = 21/39 (53%), Positives = 24/39 (61%)
Frame = -3 / -2
Query: 584 VG*FDMSILVRSMAA*IWGARNTSASWTSSPVAYFPAHP 468
+G +SI R MAA I GAR TS WTSSP Y +HP
Sbjct: 667 IGYLFISICRRLMAACICGARYTSLKWTSSPTQYLLSHP 551
Score = 22.1 bits (42), Expect(4) = 4e-026
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -3 / -1
Query: 455 RFSIAVKPLSI 423
R SIA+KPLSI
Sbjct: 545 RLSIALKPLSI 513
>gb|BE601932.2|BE601932 HVSMEh0100D18f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0100D18f, mRNA sequence
Length = 709
Score = 128 bits (274), Expect(3) = 2e-057
Identities = 52/103 (50%), Positives = 77/103 (74%)
Frame = +1 / +1
Query: 142 QSDPEFVKLNPMKFVPALVDGSSVIGDSYAITLYLEDKYPEPPLLPQDLQKKALNHQIAS 321
++DP++ K+NP+K++PALVDG V+ DS AI LYLEDKYP+ PL+P+D++ KAL+ QIA+
Sbjct: 265 RTDPDYEKINPIKYIPALVDGDFVLSDSLAIILYLEDKYPQHPLMPKDIKMKALDLQIAN 444
Query: 322 IVASGIQPLHNLTVLRFIDQKVGAGESVLWTQQQIERGFTAIE 450
IV S IQPL V+ + ++ + ES+ Q+ I++GF AIE
Sbjct: 445 IVCSSIQPLQGYGVIGLHEGRLSSDESLEVVQRYIDKGFRAIE 573
Score = 67.5 bits (141), Expect(3) = 2e-057
Identities = 27/42 (64%), Positives = 30/42 (71%)
Frame = +1 / +1
Query: 463 LKGCAGKYATGDEVQLADVFLAPQIYAAIERTKIDMSNYPTL 588
L GC KY GDEV DVFLAPQI+AAI R +IDM+ YP L
Sbjct: 580 LDGCDSKYCVGDEVHXGDVFLAPQIHAAINRXQIDMTKYPIL 705
Score = 66.1 bits (138), Expect(3) = 2e-057
Identities = 26/31 (83%), Positives = 27/31 (87%)
Frame = +1 / +1
Query: 34 MLYSYWRSSCSHRARIALNLKGVDYEYKAVN 126
+LY W SSCSHR RIALNLKGVDYEYKAVN
Sbjct: 169 ILYGAWISSCSHRVRIALNLKGVDYEYKAVN 261
Score = 57.9 bits (120), Expect(3) = 5e-027
Identities = 33/68 (48%), Positives = 39/68 (57%)
Frame = -3 / -3
Query: 350 WRG*IPEATMLAIW*FKAFFXXXXXXXXXXGYLSSKYSVIA*ESPITELPSTNAGTNFIG 171
WRG + E TM AI +AF GYLSS+Y +IA ES T+ PSTNAG IG
Sbjct: 473 WRGWMLEQTMFAI*RSRAFILISLGMRGC*GYLSSRYKMIARESDRTKSPSTNAGMYLIG 294
Query: 170 LSLTNSGS 147
L + SGS
Sbjct: 293 LIFS*SGS 270
Score = 55.1 bits (114), Expect(3) = 5e-027
Identities = 24/40 (60%), Positives = 28/40 (70%)
Frame = -3 / -3
Query: 587 RVG*FDMSILVRSMAA*IWGARNTSASWTSSPVAYFPAHP 468
++G F +SI R MAA*I GARNTS WTSSP Y +HP
Sbjct: 704 KIGYFVISIXKRLMAA*ICGARNTSPXWTSSPTQYLLSHP 585
Score = 46.0 bits (94), Expect(3) = 5e-027
Identities = 22/32 (68%), Positives = 24/32 (75%)
Frame = -3 / -3
Query: 134 LRRFTALYS*STPLRLRAMRARWEHELRQYEY 39
+R TALYS*STPLRLRA+R R E EL Q Y
Sbjct: 269 VRGLTALYS*STPLRLRAIRTR*EQELIQAPY 174
>gb|BQ658168.1|BQ658168 HA05H06u HA Hordeum vulgare subsp. vulgare cDNA clone HA05H06
3-PRIME, mRNA sequence
Length = 620
Score = 140 bits (301), Expect(3) = 3e-057
Identities = 56/71 (78%), Positives = 65/71 (91%)
Frame = +1 / -3
Query: 463 LKGCAGKYATGDEVQLADVFLAPQIYAAIERTKIDMSNYPTLARLHSEYMSHPAFEAALP 642
+KGCAGK+A GDEVQLADVFLAPQI+AA+ R +IDMS YPTLARLH +YM+HPAFEAALP
Sbjct: 438 IKGCAGKFAMGDEVQLADVFLAPQIFAAVTRFQIDMSKYPTLARLHDQYMTHPAFEAALP 259
Query: 643 GKQPDAPSSS* 675
+QPDAPSS+*
Sbjct: 258 DRQPDAPSSA* 226
Score = 118 bits (253), Expect(3) = 3e-044
Identities = 51/67 (76%), Positives = 54/67 (80%)
Frame = -3 / +2
Query: 668 DEGASGCLPGSAASNAGCDMYSEWSLARVG*FDMSILVRSMAA*IWGARNTSASWTSSPV 489
+EGASGC GSAASNAGC +Y WSLARVG FDMSI R AA IWGARNTSASWTSSP+
Sbjct: 233 EEGASGCRSGSAASNAGCVIY*SWSLARVGYFDMSI*KRVTAAKIWGARNTSASWTSSPI 412
Query: 488 AYFPAHP 468
A FPA P
Sbjct: 413 ANFPAQP 433
Score = 77.1 bits (162), Expect(3) = 2e-026
Identities = 36/70 (51%), Positives = 44/70 (62%)
Frame = +3 / -2
Query: 465 KRMRREVCNRR*SPTGRCIPCTPDLCSH*TH*N*HVKLPHSC*APLGVHVTPCV*SSAPW 644
+R+ EVC R*SPTGR IPCTPD C + N HV++ H AP V+ TPC+*S AP
Sbjct: 436 QRLCWEVCYGR*SPTGRRIPCTPDFCCSDSFSNRHVEISHPREAPRSVYDTPCI*SCAP* 257
Query: 645 QATGRPFILL 674
A PF+ L
Sbjct: 256 PAARCPFLCL 227
Score = 72.1 bits (151), Expect(3) = 2e-027
Identities = 37/76 (48%), Positives = 44/76 (57%)
Frame = -1 / +3
Query: 694 TH*GAVPRRMKGRPVACQGALLQTQGVTCTPSGA*QEWGSLTCQF*CVQWLHRSGVQGIH 515
TH + R+ KG A QGA LQ QGV+ T GA + W TC+F +SGVQGI
Sbjct: 207 THPRPMSRQRKGHRAAGQGAQLQMQGVSYTDRGASRGWDISTCRFENESLQQKSGVQGIR 386
Query: 514 LPVGLHLLLHTSRRIL 467
LPVGLHL TS+ L
Sbjct: 387 LPVGLHLP*QTSQHSL 434
Score = 71.6 bits (150), Expect(3) = 3e-057
Identities = 26/38 (68%), Positives = 34/38 (89%)
Frame = +1 / -3
Query: 349 HNLTVLRFIDQKVGAGESVLWTQQQIERGFTAIENLIQ 462
HNLT++RFI+QKVG GES+ W QQQI+RGFT +EN+I+
Sbjct: 546 HNLTLVRFIEQKVGTGESLPWVQQQIDRGFTTVENMIK 433
Score = 59.3 bits (123), Expect(3) = 3e-044
Identities = 25/36 (69%), Positives = 25/36 (69%)
Frame = -3 / +2
Query: 458 IRFSIAVKPLSICC*VHNTLSPAPTFWSMNLNTVRL 351
I FS VKPLSICC H LSP PTF SMNL VRL
Sbjct: 437 IMFSTVVKPLSICCWTHGRLSPVPTFCSMNLTKVRL 544
Score = 53.8 bits (111), Expect(3) = 2e-027
Identities = 20/35 (57%), Positives = 28/35 (80%)
Frame = -2 / +1
Query: 453 VLNSCETSLDLLLSPQHTLPCTNLLVNEPQHCEVM 349
VLNSCETS++LLL P+ LPC++LL+NE E++
Sbjct: 442 VLNSCETSINLLLDPREALPCSDLLLNESHQGEIV 546
Score = 48.7 bits (100), Expect(3) = 3e-057
Identities = 21/24 (87%), Positives = 22/24 (91%)
Frame = +1 / -2
Query: 277 PQDLQKKALNHQIASIVASGIQPL 348
PQDL+KKALN QIASIV SGIQPL
Sbjct: 619 PQDLEKKALNIQIASIVCSGIQPL 548
Score = 42.3 bits (86), Expect(3) = 2e-026
Identities = 16/22 (72%), Positives = 16/22 (72%)
Frame = +3 / -1
Query: 282 RPSKESFESPDCKHCSFWYSTS 347
RP KE E PD KHC FWYSTS
Sbjct: 614 RP*KEGPEYPDSKHCVFWYSTS 549
Score = 39.1 bits (79), Expect(3) = 3e-044
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = -3 / +3
Query: 347 RG*IPEATMLAIW*FKAFF 291
RG*IPE TMLAIW F+AFF
Sbjct: 549 RG*IPEHTMLAIWIFRAFF 605
Score = 37.3 bits (75), Expect(3) = 2e-026
Identities = 20/34 (58%), Positives = 23/34 (67%)
Frame = +2 / -1
Query: 356 SQC*GSLTRRLVQGRVCCGLNNKSREVSQLLRT* 457
S * SL++R QGR G NN+ EVSQLLRT*
Sbjct: 539 SPW*DSLSKRSEQGRASRGSNNRLIEVSQLLRT* 438
Score = 34.5 bits (69), Expect(3) = 2e-027
Identities = 15/22 (68%), Positives = 16/22 (72%)
Frame = -1 / +1
Query: 346 EVEYQKLQCLQSGDSKLSFEGL 281
EVEYQ QCL SG S SF+GL
Sbjct: 550 EVEYQNTQCLLSGYSGPSFQGL 615
>gb|BG368555.1|BG368555 HVSMEi0019L09f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0019L09f, mRNA sequence
Length = 624
Score = 131 bits (280), Expect(3) = 2e-056
Identities = 53/106 (50%), Positives = 79/106 (74%)
Frame = +1 / +3
Query: 142 QSDPEFVKLNPMKFVPALVDGSSVIGDSYAITLYLEDKYPEPPLLPQDLQKKALNHQIAS 321
++DP++ K+NP+K++PALVDG V+ DS AI LYLEDKYP+ PL+P+D++ KAL+ QIA+
Sbjct: 198 RTDPDYEKINPIKYIPALVDGDFVLSDSLAIILYLEDKYPQHPLMPKDIKMKALDLQIAN 377
Query: 322 IVASGIQPLHNLTVLRFIDQKVGAGESVLWTQQQIERGFTAIENLI 459
IV S IQPL V+ + ++ + ES+ Q+ I++GF AIE L+
Sbjct: 378 IVCSSIQPLQGYGVIGLHEGRLSSDESLEVVQRYIDKGFRAIEKLL 515
Score = 66.1 bits (138), Expect(3) = 2e-056
Identities = 26/31 (83%), Positives = 27/31 (87%)
Frame = +1 / +3
Query: 34 MLYSYWRSSCSHRARIALNLKGVDYEYKAVN 126
+LY W SSCSHR RIALNLKGVDYEYKAVN
Sbjct: 102 ILYGAWISSCSHRVRIALNLKGVDYEYKAVN 194
Score = 61.1 bits (127), Expect(3) = 2e-056
Identities = 25/37 (67%), Positives = 28/37 (75%)
Frame = +1 / +3
Query: 463 LKGCAGKYATGDEVQLADVFLAPQIYAAIERTKIDMS 573
L GC KY GDEV L DVFLAPQI+AAI R +IDM+
Sbjct: 513 LDGCDSKYCVGDEVHLXDVFLAPQIHAAINRFQIDMT 623
Score = 57.9 bits (120), Expect(4) = 3e-027
Identities = 33/68 (48%), Positives = 39/68 (57%)
Frame = -3 / -3
Query: 350 WRG*IPEATMLAIW*FKAFFXXXXXXXXXXGYLSSKYSVIA*ESPITELPSTNAGTNFIG 171
WRG + E TM AI +AF GYLSS+Y +IA ES T+ PSTNAG IG
Sbjct: 406 WRGWMLEQTMFAI*RSRAFILISLGMRGC*GYLSSRYKMIARESDRTKSPSTNAGMYLIG 227
Query: 170 LSLTNSGS 147
L + SGS
Sbjct: 226 LIFS*SGS 203
Score = 50.6 bits (104), Expect(4) = 3e-027
Identities = 22/34 (64%), Positives = 24/34 (70%)
Frame = -3 / -3
Query: 569 MSILVRSMAA*IWGARNTSASWTSSPVAYFPAHP 468
+SI R MAA*I GARNTS WTSSP Y +HP
Sbjct: 619 ISIWKRLMAA*ICGARNTSXKWTSSPTQYLLSHP 518
Score = 46.0 bits (94), Expect(4) = 3e-027
Identities = 22/32 (68%), Positives = 24/32 (75%)
Frame = -3 / -3
Query: 134 LRRFTALYS*STPLRLRAMRARWEHELRQYEY 39
+R TALYS*STPLRLRA+R R E EL Q Y
Sbjct: 202 VRGLTALYS*STPLRLRAIRTR*EQELIQAPY 107
Score = 22.6 bits (43), Expect(4) = 3e-027
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = -3 / -3
Query: 452 FSIAVKPLSI 423
FSIA+KPLSI
Sbjct: 508 FSIALKPLSI 479
>gb|AJ462436.1|AJ462436 AJ462436 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200078F04F1, mRNA sequence
Length = 360
Score = 122 bits (262), Expect(2) = 2e-055
Identities = 48/62 (77%), Positives = 56/62 (90%)
Frame = +1 / +1
Query: 463 LKGCAGKYATGDEVQLADVFLAPQIYAAIERTKIDMSNYPTLARLHSEYMSHPAFEAALP 642
+KGCAGK+A GDEVQLADVFLAPQI+AA+ R +IDMS YPTLARLH +YM+HPAFEAALP
Sbjct: 175 IKGCAGKFAMGDEVQLADVFLAPQIFAAVTRFQIDMSKYPTLARLHDQYMTHPAFEAALP 354
Query: 643 GK 648
+
Sbjct: 355 DR 360
Score = 113 bits (242), Expect(2) = 2e-055
Identities = 46/60 (76%), Positives = 55/60 (91%)
Frame = +1 / +1
Query: 283 DLQKKALNHQIASIVASGIQPLHNLTVLRFIDQKVGAGESVLWTQQQIERGFTAIENLIQ 462
DL+KKALN QIASIV SGIQPLHNLT++RFI+QKVG GES+ W QQQI+RGFTA+EN+I+
Sbjct: 1 DLEKKALNIQIASIVCSGIQPLHNLTLVRFIEQKVGTGESLPWVQQQIDRGFTAVENMIK 180
Score = 103 bits (220), Expect(2) = 3e-044
Identities = 45/58 (77%), Positives = 47/58 (81%)
Frame = -3 / -2
Query: 641 GSAASNAGCDMYSEWSLARVG*FDMSILVRSMAA*IWGARNTSASWTSSPVAYFPAHP 468
GSAASNAGC +Y WSLARVG FDMSI R AA IWGARNTSASWTSSP+A FPA P
Sbjct: 353 GSAASNAGCVIY*SWSLARVGYFDMSI*KRVTAAKIWGARNTSASWTSSPIANFPAQP 180
Score = 95.5 bits (202), Expect(2) = 3e-044
Identities = 42/56 (75%), Positives = 43/56 (76%)
Frame = -3 / -2
Query: 458 IRFSIAVKPLSICC*VHNTLSPAPTFWSMNLNTVRLWRG*IPEATMLAIW*FKAFF 291
I FS AVKPLSICC H LSP PTF SMNL VRL RG*IPE TMLAIW F+AFF
Sbjct: 176 IMFSTAVKPLSICCWTHGRLSPVPTFCSMNLTKVRL*RG*IPEHTMLAIWIFRAFF 9
Score = 79.4 bits (167), Expect(2) = 1e-029
Identities = 31/51 (60%), Positives = 42/51 (82%)
Frame = -2 / -1
Query: 453 VLNSCETSLDLLLSPQHTLPCTNLLVNEPQHCEVMERLNTRSYNACNLVIQ 301
VLNSCETS++LLL P+ LPC++LL+NE E+++RLNTR++NAC L IQ
Sbjct: 171 VLNSCETSINLLLDPREALPCSDLLLNESHQGEIVKRLNTRTHNACYLDIQ 19
Score = 71.6 bits (150), Expect(2) = 2e-026
Identities = 32/59 (54%), Positives = 39/59 (66%)
Frame = +3 / +3
Query: 465 KRMRREVCNRR*SPTGRCIPCTPDLCSH*TH*N*HVKLPHSC*APLGVHVTPCV*SSAP 641
+R+ EVC R*SPTGR IPCTPD C + N HV++ H AP V+ TPC+*S AP
Sbjct: 177 QRLCWEVCYGR*SPTGRRIPCTPDFCCSDSFSNRHVEISHPREAPRSVYDTPCI*SCAP 353
Score = 70.7 bits (148), Expect(2) = 1e-029
Identities = 30/58 (51%), Positives = 38/58 (65%)
Frame = -2 / -1
Query: 639 ERCFKRRV*HVLRVEPSKSGVV*HVNFSAFNGCIDLGCKEYICQLDFISCCILPGASF 466
ER FK RV H+L VEP + G+ HV+ + +LGCKEY+CQLDFIS LP +F
Sbjct: 351 ERSFKCRVCHILIVEPREGGIFRHVDLKTSHCSKNLGCKEYVCQLDFISHSKLPSTAF 178
Score = 68.0 bits (142), Expect(2) = 2e-026
Identities = 33/58 (56%), Positives = 36/58 (62%)
Frame = +3 / +3
Query: 285 PSKESFESPDCKHCSFWYSTSP*PHSVEVH*PEGWCRGECVVDSTTNRERFHSY*EPD 458
P KE E PD KHC FWYSTS H E+H* +G RGE V TT+ RFHS *E D
Sbjct: 3 P*KEGPEYPDSKHCVFWYSTSSQSHLGEIH*AKGRNRGEPPVGPTTD**RFHSC*EHD 176
>gb|BF254477.2|BF254477 HVSMEf0004C05f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0004C05f, mRNA sequence
Length = 863
Score = 128 bits (274), Expect(3) = 2e-055
Identities = 52/103 (50%), Positives = 77/103 (74%)
Frame = +1 / +1
Query: 142 QSDPEFVKLNPMKFVPALVDGSSVIGDSYAITLYLEDKYPEPPLLPQDLQKKALNHQIAS 321
++DP++ K+NP+K++PALVDG V+ DS AI LYLEDKYP+ PL+P+D++ KAL+ QIA+
Sbjct: 220 RTDPDYEKINPIKYIPALVDGDFVLSDSLAIILYLEDKYPQHPLMPKDIKMKALDLQIAN 399
Query: 322 IVASGIQPLHNLTVLRFIDQKVGAGESVLWTQQQIERGFTAIE 450
IV S IQPL V+ + ++ + ES+ Q+ I++GF AIE
Sbjct: 400 IVCSSIQPLQGYGVIGLHEGRLSSDESLEVVQRYIDKGFRAIE 528
Score = 66.1 bits (138), Expect(3) = 2e-055
Identities = 26/31 (83%), Positives = 27/31 (87%)
Frame = +1 / +1
Query: 34 MLYSYWRSSCSHRARIALNLKGVDYEYKAVN 126
+LY W SSCSHR RIALNLKGVDYEYKAVN
Sbjct: 124 ILYGAWISSCSHRVRIALNLKGVDYEYKAVN 216
Score = 60.2 bits (125), Expect(3) = 2e-055
Identities = 24/42 (57%), Positives = 28/42 (66%)
Frame = +1 / +1
Query: 463 LKGCAGKYATGDEVQLADVFLAPQIYAAIERTKIDMSNYPTL 588
L GC KY GDEV L DV LAPQI+ + R +IDM+ YP L
Sbjct: 535 LDGCDSKYCVGDEVHLGDVCLAPQIHGRLNRFQIDMTRYPIL 660
Score = 57.9 bits (120), Expect(4) = 7e-025
Identities = 33/68 (48%), Positives = 39/68 (57%)
Frame = -3 / -1
Query: 350 WRG*IPEATMLAIW*FKAFFXXXXXXXXXXGYLSSKYSVIA*ESPITELPSTNAGTNFIG 171
WRG + E TM AI +AF GYLSS+Y +IA ES T+ PSTNAG IG
Sbjct: 428 WRGWMLEQTMFAI*RSRAFILISLGMRGC*GYLSSRYKMIARESDRTKSPSTNAGMYLIG 249
Query: 170 LSLTNSGS 147
L + SGS
Sbjct: 248 LIFS*SGS 225
Score = 46.0 bits (94), Expect(4) = 7e-025
Identities = 22/32 (68%), Positives = 24/32 (75%)
Frame = -3 / -1
Query: 134 LRRFTALYS*STPLRLRAMRARWEHELRQYEY 39
+R TALYS*STPLRLRA+R R E EL Q Y
Sbjct: 224 VRGLTALYS*STPLRLRAIRTR*EQELIQAPY 129
Score = 42.3 bits (86), Expect(4) = 7e-025
Identities = 19/40 (47%), Positives = 24/40 (60%)
Frame = -3 / -1
Query: 587 RVG*FDMSILVRSMAA*IWGARNTSASWTSSPVAYFPAHP 468
++G +SI R *I GAR+TS WTSSP Y +HP
Sbjct: 659 KIGYLVISIWKRLRRP*ICGARHTSPKWTSSPTQYLLSHP 540
Score = 22.6 bits (43), Expect(4) = 7e-025
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = -3 / -1
Query: 452 FSIAVKPLSI 423
FSIA+KPLSI
Sbjct: 530 FSIALKPLSI 501
>gb|BU967702.1|BU967702 HB05C06r BC Hordeum vulgare subsp. vulgare cDNA clone HB05C06
5-PRIME, mRNA sequence
Length = 377
Score = 136 bits (291), Expect(2) = 6e-055
Identities = 53/67 (79%), Positives = 61/67 (91%)
Frame = +1 / +3
Query: 463 LKGCAGKYATGDEVQLADVFLAPQIYAAIERTKIDMSNYPTLARLHSEYMSHPAFEAALP 642
+KGCAGK+A GDEVQLADVFLAPQI+AA+ R +IDMS YPTLARLH +YM+HPAFEAALP
Sbjct: 177 IKGCAGKFAMGDEVQLADVFLAPQIFAAVTRFQIDMSKYPTLARLHDQYMTHPAFEAALP 356
Query: 643 GKQPDAP 663
+QPDAP
Sbjct: 357 DRQPDAP 377
Score = 115 bits (246), Expect(2) = 1e-043
Identities = 50/65 (76%), Positives = 52/65 (80%)
Frame = -3 / -2
Query: 662 GASGCLPGSAASNAGCDMYSEWSLARVG*FDMSILVRSMAA*IWGARNTSASWTSSPVAY 483
GASGC GSAASNAGC +Y WSLARVG FDMSI R AA IWGARNTSASWTSSP+A
Sbjct: 376 GASGCRSGSAASNAGCVIY*SWSLARVGYFDMSI*KRVTAAKIWGARNTSASWTSSPIAN 197
Query: 482 FPAHP 468
FPA P
Sbjct: 196 FPAQP 182
Score = 98.7 bits (209), Expect(2) = 6e-055
Identities = 39/51 (76%), Positives = 47/51 (92%)
Frame = +1 / +3
Query: 310 QIASIVASGIQPLHNLTVLRFIDQKVGAGESVLWTQQQIERGFTAIENLIQ 462
QIASIV SGIQPLHNLT++RFI+QKVG GES+ W QQQI+RGFTA+EN+I+
Sbjct: 30 QIASIVCSGIQPLHNLTLVRFIEQKVGTGESLPWVQQQIDRGFTAVENMIK 182
Score = 81.3 bits (171), Expect(2) = 1e-043
Identities = 37/49 (75%), Positives = 37/49 (75%)
Frame = -3 / -2
Query: 458 IRFSIAVKPLSICC*VHNTLSPAPTFWSMNLNTVRLWRG*IPEATMLAI 312
I FS AVKPLSICC H LSP PTF SMNL VRL RG*IPE TMLAI
Sbjct: 178 IMFSTAVKPLSICCWTHGRLSPVPTFCSMNLTKVRL*RG*IPEHTMLAI 32
Score = 76.7 bits (161), Expect(2) = 8e-029
Identities = 29/48 (60%), Positives = 40/48 (83%)
Frame = -2 / -1
Query: 453 VLNSCETSLDLLLSPQHTLPCTNLLVNEPQHCEVMERLNTRSYNACNL 310
VLNSCETS++LLL P+ LPC++LL+NE E+++RLNTR++NAC L
Sbjct: 173 VLNSCETSINLLLDPREALPCSDLLLNESHQGEIVKRLNTRTHNACYL 30
Score = 72.1 bits (151), Expect(2) = 4e-024
Identities = 34/66 (51%), Positives = 41/66 (62%)
Frame = +3 / +2
Query: 465 KRMRREVCNRR*SPTGRCIPCTPDLCSH*TH*N*HVKLPHSC*APLGVHVTPCV*SSAPW 644
+R+ EVC R*SPTGR IPCTPD C + N HV++ H AP V+ TPC+*S AP
Sbjct: 179 QRLCWEVCYGR*SPTGRRIPCTPDFCCSDSFSNRHVEISHPREAPRSVYDTPCI*SCAP* 358
Query: 645 QATGRP 662
A P
Sbjct: 359 PAARCP 376
Score = 70.7 bits (148), Expect(2) = 8e-029
Identities = 30/58 (51%), Positives = 38/58 (65%)
Frame = -2 / -1
Query: 639 ERCFKRRV*HVLRVEPSKSGVV*HVNFSAFNGCIDLGCKEYICQLDFISCCILPGASF 466
ER FK RV H+L VEP + G+ HV+ + +LGCKEY+CQLDFIS LP +F
Sbjct: 353 ERSFKCRVCHILIVEPREGGIFRHVDLKTSHCSKNLGCKEYVCQLDFISHSKLPSTAF 180
Score = 59.3 bits (123), Expect(2) = 4e-024
Identities = 28/49 (57%), Positives = 31/49 (63%)
Frame = +3 / +2
Query: 312 DCKHCSFWYSTSP*PHSVEVH*PEGWCRGECVVDSTTNRERFHSY*EPD 458
D KHC FWYSTS H E+H* +G RGE V TT+ RFHS *E D
Sbjct: 32 DSKHCVFWYSTSSQSHLGEIH*AKGRNRGEPPVGPTTD**RFHSC*EHD 178
>gb|AV917187.1|AV917187 AV917187 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags8h03 5', mRNA sequence
Length = 560
Score = 136 bits (292), Expect(3) = 6e-055
Identities = 57/106 (53%), Positives = 78/106 (73%)
Frame = +1 / +1
Query: 145 SDPEFVKLNPMKFVPALVDGSSVIGDSYAITLYLEDKYPEPPLLPQDLQKKALNHQIASI 324
+DP++ K+NP+K+VPAL DG ++ DS AI LYLEDKYP PLLPQDL++KALN QIA+I
Sbjct: 136 NDPDYEKINPIKYVPALQDGDILVSDSLAIILYLEDKYPLHPLLPQDLKRKALNLQIANI 315
Query: 325 VASGIQPLHNLTVLRFIDQKVGAGESVLWTQQQIERGFTAIENLIQ 462
V S IQPL V+ ++ K+G+ ES+ I++GF AIE L++
Sbjct: 316 VCSSIQPLQCYAVVGLVNGKLGSDESLQIVHHYIDKGFRAIEKLLE 453
Score = 66.6 bits (139), Expect(3) = 6e-055
Identities = 27/37 (72%), Positives = 31/37 (83%)
Frame = +1 / +1
Query: 463 LKGCAGKYATGDEVQLADVFLAPQIYAAIERTKIDMS 573
L+GC K+ATGDEVQLADVFLAPQI+A + R IDMS
Sbjct: 448 LEGCNSKFATGDEVQLADVFLAPQIHAGVTRFNIDMS 558
Score = 60.6 bits (126), Expect(3) = 4e-025
Identities = 26/36 (72%), Positives = 27/36 (75%)
Frame = -3 / -1
Query: 575 FDMSILVRSMAA*IWGARNTSASWTSSPVAYFPAHP 468
FDMS+L R A IWGARNTSASWTSSPVA HP
Sbjct: 560 FDMSMLKRVTPACIWGARNTSASWTSSPVANLLLHP 453
Score = 52.4 bits (108), Expect(3) = 4e-025
Identities = 36/85 (42%), Positives = 43/85 (50%)
Frame = -3 / -1
Query: 401 LSPAPTFWSMNLNTVRLWRG*IPEATMLAIW*FKAFFXXXXXXXXXXGYLSSKYSVIA*E 222
LS P N T RG*+ E TM AI +AF GYLSS+Y++IA E
Sbjct: 392 LSSEPNLPLTNPTTA*H*RG*MLEHTMFAICRLRAFLFRS*GKRGCRGYLSSRYNMIARE 213
Query: 221 SPITELPSTNAGTNFIGLSLTNSGS 147
S PS +AGT IGL + SGS
Sbjct: 212 SETKISPSCSAGTYLIGLIFS*SGS 138
Score = 50.1 bits (103), Expect(3) = 6e-055
Identities = 21/30 (70%), Positives = 25/30 (83%)
Frame = +1 / +1
Query: 34 MLYSYWRSSCSHRARIALNLKGVDYEYKAV 123
+LYS SSCS+R RIAL LKGV+YEY+AV
Sbjct: 40 VLYSAAISSCSYRVRIALTLKGVEYEYRAV 129
Score = 39.6 bits (80), Expect(3) = 4e-025
Identities = 18/23 (78%), Positives = 19/23 (82%)
Frame = -3 / -1
Query: 122 TALYS*STPLRLRAMRARWEHEL 54
TALYS STPLR+RAMR R E EL
Sbjct: 128 TALYSYSTPLRVRAMRTR*EQEL 60
>gb|CA003015.1|CA003015 HS09C16r HS Hordeum vulgare subsp. vulgare cDNA clone HS09C16
5-PRIME, mRNA sequence
Length = 337
Score = 213 bits (459), Expect = 1e-054
Identities = 88/107 (82%), Positives = 95/107 (88%)
Frame = +1 / +3
Query: 1 MAEVEATVGRLMLYSYWRSSCSHRARIALNLKGVDYEYKAVNLLKGEQSDPEFVKLNPMK 180
MA EA R +LYSYWRSSCSHR RIALNLKG+DYEYKAVNLLKGEQSDPEF+KLNPMK
Sbjct: 15 MASAEAPAARPILYSYWRSSCSHRVRIALNLKGIDYEYKAVNLLKGEQSDPEFMKLNPMK 194
Query: 181 FVPALVDGSSVIGDSYAITLYLEDKYPEPPLLPQDLQKKALNHQIAS 321
FVPA V+G +VIGDSYAI LYLEDKYP+ PLLPQDL+KKALN QIAS
Sbjct: 195 FVPAWVNGDAVIGDSYAIALYLEDKYPQRPLLPQDLEKKALNIQIAS 335
Score = 157 bits (337), Expect = 9e-038
Identities = 74/107 (69%), Positives = 76/107 (71%)
Frame = -3 / -1
Query: 323 MLAIW*FKAFFXXXXXXXXXXGYLSSKYSVIA*ESPITELPSTNAGTNFIGLSLTNSGSD 144
MLAIW F+AFF GYLSSKY+ IA*ESPIT P T AGTNFIGLS NSGSD
Sbjct: 337 MLAIWIFRAFFSRSWGKRGR*GYLSSKYNAIA*ESPITASPLTQAGTNFIGLSFMNSGSD 158
Query: 143 CSPLRRFTALYS*STPLRLRAMRARWEHELRQYEYSISRPTVASTSA 3
CSPLRR TALYS*S PLRL AMR RWE ELRQYE I R AS A
Sbjct: 157 CSPLRRLTALYS*SIPLRLSAMRTRWEQELRQYE*RIGRAAGASAEA 17
Score = 123 bits (264), Expect = 1e-027
Identities = 58/99 (58%), Positives = 66/99 (66%)
Frame = +3 / +2
Query: 27 ATDXXXXXXXXXXPPCPHRSQSQRCGLRVQGGEPSQGRAV*SRIRQA*SYEVRPCVG*WQ 206
A D PP PHR+Q QR L VQGG+P QGRAV*SR+ +A*SYEVRPC+G +
Sbjct: 41 AADSLLVLAQLLLPPRPHRAQPQRYRL*VQGGQPPQGRAV*SRVHEA*SYEVRPCLGQRR 220
Query: 207 FCNR*LLRDNTVFGGQVPRASSSTSRPSKESFESPDCKH 323
NR*LLR++ VFGGQVP A S RP KE E PD KH
Sbjct: 221 RSNR*LLRNSIVFGGQVPSAPSFAPRP*KEGPEYPDSKH 337
Score = 119 bits (254), Expect = 3e-026
Identities = 59/107 (55%), Positives = 67/107 (62%)
Frame = -2 / -3
Query: 321 ACNLVIQSFXXXXXXXXXXXXXXXLQIQCYRVRVTYYRTAINQRRDELHRIKLDEFWIRL 142
AC L IQ LQIQCY VRVT Y A++ RDELHRIKL E IRL
Sbjct: 335 ACYLDIQGLLFKVLGQKRALRVLVLQIQCYCVRVTDYCVAVDPGRDELHRIKLHELGIRL 156
Query: 141 LALEKVHRLVLVIHTFEIESDAGTVGARAAPVRVQHQSPHRRLHLRH 1
LALE+V RLVL+I TFE+E DA VGA AAPVRV+++ RRL H
Sbjct: 155 LALEEVDRLVLIIDTFEVERDADAVGAGAAPVRVENRPRRRRLRRSH 15
Score = 112 bits (240), Expect = 2e-024
Identities = 55/86 (63%), Positives = 59/86 (68%)
Frame = -1 / -2
Query: 322 CLQSGDSKLSFEGLEVEEEALGTCPPNTVLSRKSHLLQNCHQPTQGRTS*D*A*RILDQT 143
CL SG S SF+GL +E A GTCPPNT+L RKSH L P QGRTS*D*A DQT
Sbjct: 336 CLLSGYSGPSFQGLGAKEGAEGTCPPNTMLLRKSHRLLRRR*PRQGRTS*D*AS*TRDQT 157
Query: 142 ARP*EGSPPCTRNPHL*D*ERCGHGG 65
ARP* G PPCT N +L* * RCG GG
Sbjct: 156 ARP*GG*PPCTHNRYL*G*ARCGRGG 79
>gb|AJ462435.1|AJ462435 AJ462435 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200019H02F1, mRNA sequence
Length = 360
Score = 136 bits (292), Expect(2) = 7e-054
Identities = 55/71 (77%), Positives = 64/71 (90%)
Frame = +1 / +2
Query: 463 LKGCAGKYATGDEVQLADVFLAPQIYAAIERTKIDMSNYPTLARLHSEYMSHPAFEAALP 642
+KGCAGK+A GDEVQLA VFLAPQI+AA+ R +IDMS YPTLARLH +YM+HPAFEAALP
Sbjct: 143 IKGCAGKFAMGDEVQLAYVFLAPQIFAAVTRFQIDMSKYPTLARLHDQYMTHPAFEAALP 322
Query: 643 GKQPDAPSSS* 675
+QPDAPSS+*
Sbjct: 323 DRQPDAPSSA* 355
Score = 116 bits (247), Expect(2) = 3e-043
Identities = 50/67 (74%), Positives = 53/67 (79%)
Frame = -3 / -1
Query: 668 DEGASGCLPGSAASNAGCDMYSEWSLARVG*FDMSILVRSMAA*IWGARNTSASWTSSPV 489
+EGASGC GSAASNAGC +Y WSLARVG FDMSI R AA IWGARNT ASWTSSP+
Sbjct: 348 EEGASGCRSGSAASNAGCVIY*SWSLARVGYFDMSI*KRVTAAKIWGARNTYASWTSSPI 169
Query: 488 AYFPAHP 468
A FPA P
Sbjct: 168 ANFPAQP 148
Score = 94.5 bits (200), Expect(2) = 7e-054
Identities = 37/49 (75%), Positives = 45/49 (91%)
Frame = +1 / +2
Query: 316 ASIVASGIQPLHNLTVLRFIDQKVGAGESVLWTQQQIERGFTAIENLIQ 462
ASIV SGIQPLHNLT++RFI+QKVG GES+ W QQQI+RGFTA+EN+I+
Sbjct: 2 ASIVCSGIQPLHNLTLVRFIEQKVGTGESLPWVQQQIDRGFTAVENMIK 148
Score = 79.4 bits (167), Expect(2) = 3e-043
Identities = 36/48 (75%), Positives = 36/48 (75%)
Frame = -3 / -1
Query: 458 IRFSIAVKPLSICC*VHNTLSPAPTFWSMNLNTVRLWRG*IPEATMLA 315
I FS AVKPLSICC H LSP PTF SMNL VRL RG*IPE TMLA
Sbjct: 144 IMFSTAVKPLSICCWTHGRLSPVPTFCSMNLTKVRL*RG*IPEHTMLA 1
Score = 75.8 bits (159), Expect(2) = 1e-028
Identities = 28/46 (60%), Positives = 39/46 (84%)
Frame = -2 / -3
Query: 453 VLNSCETSLDLLLSPQHTLPCTNLLVNEPQHCEVMERLNTRSYNAC 316
VLNSCETS++LLL P+ LPC++LL+NE E+++RLNTR++NAC
Sbjct: 139 VLNSCETSINLLLDPREALPCSDLLLNESHQGEIVKRLNTRTHNAC 2
Score = 73.5 bits (154), Expect(2) = 8e-024
Identities = 35/70 (50%), Positives = 43/70 (61%)
Frame = +3 / +1
Query: 465 KRMRREVCNRR*SPTGRCIPCTPDLCSH*TH*N*HVKLPHSC*APLGVHVTPCV*SSAPW 644
+R+ EVC R*SPTG IPCTPD C + N HV++ H AP V+ TPC+*S AP
Sbjct: 145 QRLCWEVCYGR*SPTGIRIPCTPDFCCSDSFSNRHVEISHPREAPRSVYDTPCI*SCAP* 324
Query: 645 QATGRPFILL 674
A PF+ L
Sbjct: 325 PAARCPFLCL 354
Score = 70.7 bits (148), Expect(2) = 1e-028
Identities = 30/58 (51%), Positives = 38/58 (65%)
Frame = -2 / -3
Query: 639 ERCFKRRV*HVLRVEPSKSGVV*HVNFSAFNGCIDLGCKEYICQLDFISCCILPGASF 466
ER FK RV H+L VEP + G+ HV+ + +LGCKEY+CQLDFIS LP +F
Sbjct: 319 ERSFKCRVCHILIVEPREGGIFRHVDLKTSHCSKNLGCKEYVCQLDFISHSKLPSTAF 146
Score = 57.0 bits (118), Expect(2) = 8e-024
Identities = 27/47 (57%), Positives = 30/47 (63%)
Frame = +3 / +1
Query: 318 KHCSFWYSTSP*PHSVEVH*PEGWCRGECVVDSTTNRERFHSY*EPD 458
KHC FWYSTS H E+H* +G RGE V TT+ RFHS *E D
Sbjct: 4 KHCVFWYSTSSQSHLGEIH*AKGRNRGEPPVGPTTD**RFHSC*EHD 144
>gb|CA029926.1|CA029926 HX05J14r HX Hordeum vulgare subsp. vulgare cDNA clone HX05J14
5-PRIME, mRNA sequence
Length = 658
Score = 119 bits (255), Expect(2) = 4e-053
Identities = 52/96 (54%), Positives = 69/96 (71%)
Frame = +1 / +1
Query: 175 MKFVPALVDGSSVIGDSYAITLYLEDKYPEPPLLPQDLQKKALNHQIASIVASGIQPLHN 354
+K+VPAL DG ++ DS AI LYLEDKYP PLLPQDL++KALN QIA+IV S IQPL
Sbjct: 1 IKYVPALQDGDILVSDSLAIILYLEDKYPLHPLLPQDLKRKALNLQIANIVCSSIQPLQC 180
Query: 355 LTVLRFIDQKVGAGESVLWTQQQIERGFTAIENLIQ 462
V+ ++ K+G+ ES+ I++GF AIE L++
Sbjct: 181 YAVVGLVNGKLGSDESLQIVHHYIDKGFRAIEKLLE 288
Score = 109 bits (232), Expect(2) = 4e-053
Identities = 45/68 (66%), Positives = 51/68 (75%)
Frame = +1 / +1
Query: 463 LKGCAGKYATGDEVQLADVFLAPQIYAAIERTKIDMSNYPTLARLHSEYMSHPAFEAALP 642
L+GC K+ATGDEVQLADVFLAPQI+A + R IDMS YP L R + YM PAF+AA P
Sbjct: 283 LEGCNSKFATGDEVQLADVFLAPQIHAGVTRFNIDMSKYPHLERFYKAYMEIPAFQAARP 462
Query: 643 GKQPDAPS 666
QPDAPS
Sbjct: 463 ENQPDAPS 486
Score = 89.0 bits (188), Expect(2) = 3e-024
Identities = 42/69 (60%), Positives = 47/69 (68%)
Frame = -3 / -3
Query: 674 *EDEGASGCLPGSAASNAGCDMYSEWSLARVG*FDMSILVRSMAA*IWGARNTSASWTSS 495
* EGASG G AA NAG MY+ +L++ G FDMS+L R A IWGARNTSASWTSS
Sbjct: 494 *RSEGASGWFSGRAA*NAGISMYAL*NLSKCGYFDMSMLKRVTPACIWGARNTSASWTSS 315
Query: 494 PVAYFPAHP 468
PVA HP
Sbjct: 314 PVANLLLHP 288
Score = 42.8 bits (87), Expect(2) = 3e-024
Identities = 30/73 (41%), Positives = 36/73 (49%)
Frame = -3 / -3
Query: 401 LSPAPTFWSMNLNTVRLWRG*IPEATMLAIW*FKAFFXXXXXXXXXXGYLSSKYSVIA*E 222
LS P N T RG*+ E TM AI +AF GYLSS+Y++IA E
Sbjct: 227 LSSEPNLPLTNPTTA*H*RG*MLEHTMFAICRLRAFLFRS*GKRGCRGYLSSRYNMIARE 48
Query: 221 SPITELPSTNAGT 183
S PS +AGT
Sbjct: 47 SETKISPSCSAGT 9
>gb|AV917494.1|AV917494 AV917494 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags10c10 3', mRNA sequence
Length = 700
Score = 119 bits (254), Expect(2) = 5e-053
Identities = 52/95 (54%), Positives = 68/95 (71%)
Frame = +1 / -1
Query: 178 KFVPALVDGSSVIGDSYAITLYLEDKYPEPPLLPQDLQKKALNHQIASIVASGIQPLHNL 357
K+VPAL DG ++ DS AI LYLEDKYP PLLPQDL++KALN QIA+IV S IQPL
Sbjct: 700 KYVPALQDGDILVSDSLAIILYLEDKYPLHPLLPQDLKRKALNLQIANIVCSSIQPLQCY 521
Query: 358 TVLRFIDQKVGAGESVLWTQQQIERGFTAIENLIQ 462
V+ ++ K+G+ ES+ I++GF AIE L++
Sbjct: 520 AVVGLVNGKLGSDESLQIVHHYIDKGFRAIEKLLE 416
Score = 109 bits (232), Expect(2) = 5e-053
Identities = 45/68 (66%), Positives = 51/68 (75%)
Frame = +1 / -1
Query: 463 LKGCAGKYATGDEVQLADVFLAPQIYAAIERTKIDMSNYPTLARLHSEYMSHPAFEAALP 642
L+GC K+ATGDEVQLADVFLAPQI+A + R IDMS YP L R + YM PAF+AA P
Sbjct: 421 LEGCNSKFATGDEVQLADVFLAPQIHAGVTRFNIDMSKYPHLERFYKAYMEIPAFQAARP 242
Query: 643 GKQPDAPS 666
QPDAPS
Sbjct: 241 ENQPDAPS 218
Score = 89.0 bits (188), Expect(2) = 3e-024
Identities = 42/69 (60%), Positives = 47/69 (68%)
Frame = -3 / +3
Query: 674 *EDEGASGCLPGSAASNAGCDMYSEWSLARVG*FDMSILVRSMAA*IWGARNTSASWTSS 495
* EGASG G AA NAG MY+ +L++ G FDMS+L R A IWGARNTSASWTSS
Sbjct: 210 *RSEGASGWFSGRAA*NAGISMYAL*NLSKCGYFDMSMLKRVTPACIWGARNTSASWTSS 389
Query: 494 PVAYFPAHP 468
PVA HP
Sbjct: 390 PVANLLLHP 416
Score = 42.8 bits (87), Expect(2) = 3e-024
Identities = 30/73 (41%), Positives = 36/73 (49%)
Frame = -3 / +3
Query: 401 LSPAPTFWSMNLNTVRLWRG*IPEATMLAIW*FKAFFXXXXXXXXXXGYLSSKYSVIA*E 222
LS P N T RG*+ E TM AI +AF GYLSS+Y++IA E
Sbjct: 477 LSSEPNLPLTNPTTA*H*RG*MLEHTMFAICRLRAFLFRS*GKRGCRGYLSSRYNMIARE 656
Query: 221 SPITELPSTNAGT 183
S PS +AGT
Sbjct: 657 SETKISPSCSAGT 695
>gb|BF258825.2|BF258825 HVSMEf0016M11f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0016M11f, mRNA sequence
Length = 591
Score = 131 bits (280), Expect(4) = 2e-052
Identities = 53/106 (50%), Positives = 79/106 (74%)
Frame = +1 / +1
Query: 142 QSDPEFVKLNPMKFVPALVDGSSVIGDSYAITLYLEDKYPEPPLLPQDLQKKALNHQIAS 321
++DP++ K+NP+K++PALVDG V+ DS AI LYLEDKYP+ PL+P+D++ KAL+ QIA+
Sbjct: 133 RTDPDYEKINPIKYIPALVDGDFVLSDSLAIILYLEDKYPQHPLMPKDIKMKALDLQIAN 312
Query: 322 IVASGIQPLHNLTVLRFIDQKVGAGESVLWTQQQIERGFTAIENLI 459
IV S IQPL V+ + ++ + ES+ Q+ I++GF AIE L+
Sbjct: 313 IVCSSIQPLQGYGVIGLHEGRLSSDESLEVVQRYIDKGFRAIEKLL 450
Score = 66.1 bits (138), Expect(4) = 2e-052
Identities = 26/31 (83%), Positives = 27/31 (87%)
Frame = +1 / +1
Query: 34 MLYSYWRSSCSHRARIALNLKGVDYEYKAVN 126
+LY W SSCSHR RIALNLKGVDYEYKAVN
Sbjct: 37 ILYGAWISSCSHRVRIALNLKGVDYEYKAVN 129
Score = 57.9 bits (120), Expect(4) = 4e-023
Identities = 33/68 (48%), Positives = 39/68 (57%)
Frame = -3 / -2
Query: 350 WRG*IPEATMLAIW*FKAFFXXXXXXXXXXGYLSSKYSVIA*ESPITELPSTNAGTNFIG 171
WRG + E TM AI +AF GYLSS+Y +IA ES T+ PSTNAG IG
Sbjct: 341 WRGWMLEQTMFAI*RSRAFILISLGMRGC*GYLSSRYKMIARESDRTKSPSTNAGMYLIG 162
Query: 170 LSLTNSGS 147
L + SGS
Sbjct: 161 LIFS*SGS 138
Score = 46.0 bits (94), Expect(4) = 4e-023
Identities = 22/32 (68%), Positives = 24/32 (75%)
Frame = -3 / -2
Query: 134 LRRFTALYS*STPLRLRAMRARWEHELRQYEY 39
+R TALYS*STPLRLRA+R R E EL Q Y
Sbjct: 137 VRGLTALYS*STPLRLRAIRTR*EQELIQAPY 42
Score = 40.5 bits (82), Expect(4) = 2e-052
Identities = 16/24 (66%), Positives = 16/24 (66%)
Frame = +1 / +1
Query: 463 LKGCAGKYATGDEVQLADVFLAPQ 534
L GC KY GDEV L D FLAPQ
Sbjct: 448 LDGCDSKYCVGDEVHLGDGFLAPQ 519
Score = 36.3 bits (73), Expect(4) = 4e-023
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = -3 / -2
Query: 530 GARNTSASWTSSPVAYFPAHP 468
GARN S WTSSP Y +HP
Sbjct: 515 GARNPSPKWTSSPTQYLLSHP 453
Score = 24.9 bits (48), Expect(4) = 2e-052
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +1 / +2
Query: 532 QIYAAIERTKIDMSNYPTLARL 597
+I AAI R +I M+ YP L +L
Sbjct: 518 RINAAINRLQIGMTKYPILWQL 583
Score = 22.6 bits (43), Expect(4) = 4e-023
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = -3 / -2
Query: 452 FSIAVKPLSI 423
FSIA+KPLSI
Sbjct: 443 FSIALKPLSI 414
>gb|BQ753274.1|BQ753274 EBan01_SQ001_B08_R anther, yellow stage, no treatment, cv Optic,
EBan01 Hordeum vulgare subsp. vulgare cDNA clone
EBan01_SQ001_B08 5', mRNA sequence
Length = 650
Score = 131 bits (280), Expect(3) = 4e-052
Identities = 53/106 (50%), Positives = 79/106 (74%)
Frame = +1 / +2
Query: 142 QSDPEFVKLNPMKFVPALVDGSSVIGDSYAITLYLEDKYPEPPLLPQDLQKKALNHQIAS 321
++DP++ K+NP+K++PALVDG V+ DS AI LYLEDKYP+ PL+P+D++ KAL+ QIA+
Sbjct: 257 RTDPDYEKINPIKYIPALVDGDFVLSDSLAIILYLEDKYPQHPLMPKDIKMKALDLQIAN 436
Query: 322 IVASGIQPLHNLTVLRFIDQKVGAGESVLWTQQQIERGFTAIENLI 459
IV S IQPL V+ + ++ + ES+ Q+ I++GF AIE L+
Sbjct: 437 IVCSSIQPLQGYGVIGLHEGRLSSDESLEVVQRYIDKGFRAIEKLL 574
Score = 66.1 bits (138), Expect(3) = 4e-052
Identities = 26/31 (83%), Positives = 27/31 (87%)
Frame = +1 / +2
Query: 34 MLYSYWRSSCSHRARIALNLKGVDYEYKAVN 126
+LY W SSCSHR RIALNLKGVDYEYKAVN
Sbjct: 161 ILYGAWISSCSHRVRIALNLKGVDYEYKAVN 253
Score = 57.9 bits (120), Expect(4) = 2e-024
Identities = 33/68 (48%), Positives = 39/68 (57%)
Frame = -3 / -3
Query: 350 WRG*IPEATMLAIW*FKAFFXXXXXXXXXXGYLSSKYSVIA*ESPITELPSTNAGTNFIG 171
WRG + E TM AI +AF GYLSS+Y +IA ES T+ PSTNAG IG
Sbjct: 465 WRGWMLEQTMFAI*RSRAFILISLGMRGC*GYLSSRYKMIARESDRTKSPSTNAGMYLIG 286
Query: 170 LSLTNSGS 147
L + SGS
Sbjct: 285 LIFS*SGS 262
Score = 46.4 bits (95), Expect(3) = 4e-052
Identities = 18/26 (69%), Positives = 19/26 (73%)
Frame = +1 / +2
Query: 463 LKGCAGKYATGDEVQLADVFLAPQIY 540
L GC KY GDEV L DVFLAPQI+
Sbjct: 572 LDGCDSKYCVGDEVHLGDVFLAPQIH 649
Score = 46.0 bits (94), Expect(4) = 2e-024
Identities = 22/32 (68%), Positives = 24/32 (75%)
Frame = -3 / -3
Query: 134 LRRFTALYS*STPLRLRAMRARWEHELRQYEY 39
+R TALYS*STPLRLRA+R R E EL Q Y
Sbjct: 261 VRGLTALYS*STPLRLRAIRTR*EQELIQAPY 166
Score = 40.5 bits (82), Expect(4) = 2e-024
Identities = 16/24 (66%), Positives = 17/24 (70%)
Frame = -3 / -3
Query: 539 *IWGARNTSASWTSSPVAYFPAHP 468
*I GARNTS WTSSP Y +HP
Sbjct: 648 *ICGARNTSPKWTSSPTQYLLSHP 577
Score = 22.6 bits (43), Expect(4) = 2e-024
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = -3 / -3
Query: 452 FSIAVKPLSI 423
FSIA+KPLSI
Sbjct: 567 FSIALKPLSI 538
>gb|BG418273.2|BG418273 HVSMEk0022C14f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0022C14f, mRNA sequence
Length = 505
Score = 131 bits (280), Expect(2) = 3e-051
Identities = 53/106 (50%), Positives = 79/106 (74%)
Frame = +1 / +1
Query: 142 QSDPEFVKLNPMKFVPALVDGSSVIGDSYAITLYLEDKYPEPPLLPQDLQKKALNHQIAS 321
++DP++ K+NP+K++PALVDG V+ DS AI LYLEDKYP+ PL+P+D++ KAL+ QIA+
Sbjct: 16 RTDPDYEKINPIKYIPALVDGDFVLSDSLAIILYLEDKYPQHPLMPKDIKMKALDLQIAN 195
Query: 322 IVASGIQPLHNLTVLRFIDQKVGAGESVLWTQQQIERGFTAIENLI 459
IV S IQPL V+ + ++ + ES+ Q+ I++GF AIE L+
Sbjct: 196 IVCSSIQPLQGYGVIGLHEGRLSSDESLEVVQRYIDKGFRAIEKLL 333
Score = 91.3 bits (193), Expect(2) = 3e-051
Identities = 38/58 (65%), Positives = 42/58 (72%)
Frame = +1 / +1
Query: 463 LKGCAGKYATGDEVQLADVFLAPQIYAAIERTKIDMSNYPTLARLHSEYMSHPAFEAA 636
L GC KY GDEV L DVFLAPQI+AAI R +IDM+ YP L RLH YM PAF+AA
Sbjct: 331 LDGCDSKYCVGDEVHLGDVFLAPQIHAAINRFQIDMTKYPILWRLHDAYMEIPAFQAA 504
Score = 67.5 bits (141), Expect(3) = 8e-024
Identities = 32/56 (57%), Positives = 37/56 (66%)
Frame = -3 / -3
Query: 635 AASNAGCDMYSEWSLARVG*FDMSILVRSMAA*IWGARNTSASWTSSPVAYFPAHP 468
AA NAG MY+ S ++G F +SI R MAA*I GARNTS WTSSP Y +HP
Sbjct: 503 AA*NAGISMYAS*SRHKIGYFVISIWKRLMAA*ICGARNTSPKWTSSPTQYLLSHP 336
Score = 57.9 bits (120), Expect(3) = 8e-024
Identities = 33/68 (48%), Positives = 39/68 (57%)
Frame = -3 / -3
Query: 350 WRG*IPEATMLAIW*FKAFFXXXXXXXXXXGYLSSKYSVIA*ESPITELPSTNAGTNFIG 171
WRG + E TM AI +AF GYLSS+Y +IA ES T+ PSTNAG IG
Sbjct: 224 WRGWMLEQTMFAI*RSRAFILISLGMRGC*GYLSSRYKMIARESDRTKSPSTNAGMYLIG 45
Query: 170 LSLTNSGS 147
L + SGS
Sbjct: 44 LIFS*SGS 21
Score = 22.6 bits (43), Expect(3) = 8e-024
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = -3 / -3
Query: 452 FSIAVKPLSI 423
FSIA+KPLSI
Sbjct: 326 FSIALKPLSI 297
>gb|BJ547013.1|BJ547013 BJ547013 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal37a09 5', mRNA sequence
Length = 571
Score = 131 bits (280), Expect(3) = 1e-050
Identities = 53/106 (50%), Positives = 79/106 (74%)
Frame = +1 / +3
Query: 142 QSDPEFVKLNPMKFVPALVDGSSVIGDSYAITLYLEDKYPEPPLLPQDLQKKALNHQIAS 321
++DP++ K+NP+K++PALVDG V+ DS AI LYLEDKYP+ PL+P+D++ KAL+ QIA+
Sbjct: 186 RTDPDYEKINPIKYIPALVDGDFVLSDSLAIILYLEDKYPQHPLMPKDIKMKALDLQIAN 365
Query: 322 IVASGIQPLHNLTVLRFIDQKVGAGESVLWTQQQIERGFTAIENLI 459
IV S IQPL V+ + ++ + ES+ Q+ I++GF AIE L+
Sbjct: 366 IVCSSIQPLQGYGVIGLHEGRLSSDESLEVVQRYIDKGFRAIEKLL 503
Score = 66.1 bits (138), Expect(3) = 1e-050
Identities = 26/31 (83%), Positives = 27/31 (87%)
Frame = +1 / +3
Query: 34 MLYSYWRSSCSHRARIALNLKGVDYEYKAVN 126
+LY W SSCSHR RIALNLKGVDYEYKAVN
Sbjct: 90 ILYGAWISSCSHRVRIALNLKGVDYEYKAVN 182
Score = 57.9 bits (120), Expect(4) = 6e-024
Identities = 33/68 (48%), Positives = 39/68 (57%)
Frame = -3 / -1
Query: 350 WRG*IPEATMLAIW*FKAFFXXXXXXXXXXGYLSSKYSVIA*ESPITELPSTNAGTNFIG 171
WRG + E TM AI +AF GYLSS+Y +IA ES T+ PSTNAG IG
Sbjct: 394 WRGWMLEQTMFAI*RSRAFILISLGMRGC*GYLSSRYKMIARESDRTKSPSTNAGMYLIG 215
Query: 170 LSLTNSGS 147
L + SGS
Sbjct: 214 LIFS*SGS 191
Score = 46.0 bits (94), Expect(4) = 6e-024
Identities = 22/32 (68%), Positives = 24/32 (75%)
Frame = -3 / -1
Query: 134 LRRFTALYS*STPLRLRAMRARWEHELRQYEY 39
+R TALYS*STPLRLRA+R R E EL Q Y
Sbjct: 190 VRGLTALYS*STPLRLRAIRTR*EQELIQAPY 95
Score = 41.4 bits (84), Expect(3) = 1e-050
Identities = 16/23 (69%), Positives = 16/23 (69%)
Frame = +1 / +3
Query: 463 LKGCAGKYATGDEVQLADVFLAP 531
L GC KY GDEV L DVFLAP
Sbjct: 501 LDGCDSKYCVGDEVHLGDVFLAP 569
Score = 39.1 bits (79), Expect(4) = 6e-024
Identities = 14/21 (66%), Positives = 15/21 (71%)
Frame = -3 / -1
Query: 530 GARNTSASWTSSPVAYFPAHP 468
GARNTS WTSSP Y +HP
Sbjct: 568 GARNTSPKWTSSPTQYLLSHP 506
Score = 22.6 bits (43), Expect(4) = 6e-024
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = -3 / -1
Query: 452 FSIAVKPLSI 423
FSIA+KPLSI
Sbjct: 496 FSIALKPLSI 467
>gb|BQ471154.1|BQ471154 HV01D22T HV Hordeum vulgare subsp. vulgare cDNA clone HV01D22
5-PRIME, mRNA sequence
Length = 561
Score = 131 bits (280), Expect(3) = 1e-049
Identities = 53/106 (50%), Positives = 79/106 (74%)
Frame = +1 / +2
Query: 142 QSDPEFVKLNPMKFVPALVDGSSVIGDSYAITLYLEDKYPEPPLLPQDLQKKALNHQIAS 321
++DP++ K+NP+K++PALVDG V+ DS AI LYLEDKYP+ PL+P+D++ KAL+ QIA+
Sbjct: 179 RTDPDYEKINPIKYIPALVDGDFVLSDSLAIILYLEDKYPQHPLMPKDIKMKALDLQIAN 358
Query: 322 IVASGIQPLHNLTVLRFIDQKVGAGESVLWTQQQIERGFTAIENLI 459
IV S IQPL V+ + ++ + ES+ Q+ I++GF AIE L+
Sbjct: 359 IVCSSIQPLQGYGVIGLHEGRLSSDESLEVVQRYIDKGFRAIEKLL 496
Score = 66.1 bits (138), Expect(3) = 1e-049
Identities = 26/31 (83%), Positives = 27/31 (87%)
Frame = +1 / +2
Query: 34 MLYSYWRSSCSHRARIALNLKGVDYEYKAVN 126
+LY W SSCSHR RIALNLKGVDYEYKAVN
Sbjct: 83 ILYGAWISSCSHRVRIALNLKGVDYEYKAVN 175
Score = 57.9 bits (120), Expect(4) = 6e-024
Identities = 33/68 (48%), Positives = 39/68 (57%)
Frame = -3 / -1
Query: 350 WRG*IPEATMLAIW*FKAFFXXXXXXXXXXGYLSSKYSVIA*ESPITELPSTNAGTNFIG 171
WRG + E TM AI +AF GYLSS+Y +IA ES T+ PSTNAG IG
Sbjct: 387 WRGWMLEQTMFAI*RSRAFILISLGMRGC*GYLSSRYKMIARESDRTKSPSTNAGMYLIG 208
Query: 170 LSLTNSGS 147
L + SGS
Sbjct: 207 LIFS*SGS 184
Score = 46.0 bits (94), Expect(4) = 6e-024
Identities = 22/32 (68%), Positives = 24/32 (75%)
Frame = -3 / -1
Query: 134 LRRFTALYS*STPLRLRAMRARWEHELRQYEY 39
+R TALYS*STPLRLRA+R R E EL Q Y
Sbjct: 183 VRGLTALYS*STPLRLRAIRTR*EQELIQAPY 88
Score = 39.1 bits (79), Expect(4) = 6e-024
Identities = 14/21 (66%), Positives = 15/21 (71%)
Frame = -3 / -1
Query: 530 GARNTSASWTSSPVAYFPAHP 468
GARNTS WTSSP Y +HP
Sbjct: 561 GARNTSPKWTSSPTQYLLSHP 499
Score = 38.2 bits (77), Expect(3) = 1e-049
Identities = 15/22 (68%), Positives = 15/22 (68%)
Frame = +1 / +2
Query: 463 LKGCAGKYATGDEVQLADVFLA 528
L GC KY GDEV L DVFLA
Sbjct: 494 LDGCDSKYCVGDEVHLGDVFLA 559
Score = 22.6 bits (43), Expect(4) = 6e-024
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = -3 / -1
Query: 452 FSIAVKPLSI 423
FSIA+KPLSI
Sbjct: 489 FSIALKPLSI 460
>gb|BM928838.1|BM928838 LP10014 Lemma/palea-enriched cDNA library from elongation stage of
kernel Hordeum vulgare subsp. vulgare cDNA clone 1-14
similar to Glutathione S-transferase, mRNA sequence
Length = 375
Score = 138 bits (295), Expect(2) = 8e-048
Identities = 55/71 (77%), Positives = 64/71 (90%)
Frame = +1 / +3
Query: 463 LKGCAGKYATGDEVQLADVFLAPQIYAAIERTKIDMSNYPTLARLHSEYMSHPAFEAALP 642
+KGCAGK+A GDEVQLADVFLAP I+AA+ R +IDMS YPTLARLH +YM+HPAFEAALP
Sbjct: 117 IKGCAGKFAMGDEVQLADVFLAPXIFAAVTRFQIDMSKYPTLARLHDQYMTHPAFEAALP 296
Query: 643 GKQPDAPSSS* 675
+QPDAPSS+*
Sbjct: 297 DRQPDAPSSA* 329
Score = 113 bits (241), Expect(2) = 3e-036
Identities = 49/67 (73%), Positives = 52/67 (77%)
Frame = -3 / -3
Query: 668 DEGASGCLPGSAASNAGCDMYSEWSLARVG*FDMSILVRSMAA*IWGARNTSASWTSSPV 489
+EGASGC GSAASNAGC +Y WSLARVG FDMSI R AA WGAR TSASWTSSP+
Sbjct: 322 EEGASGCRSGSAASNAGCVIY*SWSLARVGYFDMSI*KRVTAAKXWGARXTSASWTSSPI 143
Query: 488 AYFPAHP 468
A FPA P
Sbjct: 142 ANFPAQP 122
Score = 73.0 bits (153), Expect(2) = 8e-048
Identities = 27/39 (69%), Positives = 35/39 (89%)
Frame = +1 / +3
Query: 346 LHNLTVLRFIDQKVGAGESVLWTQQQIERGFTAIENLIQ 462
LHN T++RFI+QKVG GES+ W QQQI+RGFTA+EN+I+
Sbjct: 6 LHNXTLVRFIEQKVGTGESLPWVQQQIDRGFTAVENMIK 122
Score = 58.8 bits (122), Expect(2) = 3e-036
Identities = 26/38 (68%), Positives = 26/38 (68%)
Frame = -3 / -3
Query: 458 IRFSIAVKPLSICC*VHNTLSPAPTFWSMNLNTVRLWR 345
I FS AVKPLSICC H LSP PTF SMNL V L R
Sbjct: 118 IMFSTAVKPLSICCWTHGRLSPVPTFCSMNLTKVXL*R 5
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 430,230,938
Number of Sequences: 312970
Number of extensions: 6613481
Number of successful extensions: 51242
Number of sequences better than 1.0e-020: 102
length of database: 58,378,179
effective HSP length: 52
effective length of database: 42,103,739
effective search space used: 10568038489
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)