TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3713091.2.1
(1013 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CA013731.1|CA013731 HT09F05r HT Hordeum vulgare subsp. v... 134 2e-065
gb|BJ544235.1|BJ544235 BJ544235 K. Sato unpublished cDNA li... 132 4e-065
gb|BJ544573.1|BJ544573 BJ544573 K. Sato unpublished cDNA li... 126 8e-065
gb|BQ762933.1|BQ762933 EBro02_SQ006_H16 _R root, 3 week, hy... 120 5e-064
gb|AL504140.1|AL504140 AL504140 Hordeum vulgare Barke roots... 118 2e-063
gb|BJ547778.1|BJ547778 BJ547778 K. Sato unpublished cDNA li... 131 1e-061
gb|AL503324.1|AL503324 AL503324 Hordeum vulgare Barke roots... 153 8e-061
gb|AV933203.1|AV933203 AV933203 K. Sato unpublished cDNA li... 131 2e-060
gb|BJ547635.1|BJ547635 BJ547635 K. Sato unpublished cDNA li... 131 2e-060
gb|BF622215.3|BF622215 HVSMEa0002A20f Hordeum vulgare seedl... 153 5e-060
gb|BF621550.2|BF621550 HVSMEa0011F24f Hordeum vulgare seedl... 153 7e-060
gb|BF622224.2|BF622224 HVSMEa0002C05f Hordeum vulgare seedl... 153 3e-059
gb|CA011829.1|CA011829 HT03K17r HT Hordeum vulgare subsp. v... 115 1e-058
gb|BE214950.1|BE214950 HV_CEb0005F03f Hordeum vulgare seedl... 129 5e-058
gb|BJ548902.1|BJ548902 BJ548902 K. Sato unpublished cDNA li... 114 1e-057
gb|BG368894.1|BG368894 HVSMEi0021D06f Hordeum vulgare 20 DA... 139 2e-057
gb|AV908971.1|AV908971 AV908971 K. Sato unpublished cDNA li... 132 9e-057
gb|AV913623.1|AV913623 AV913623 K. Sato unpublished cDNA li... 127 6e-056
gb|CA022668.1|CA022668 HZ44A05r HZ Hordeum vulgare subsp. v... 139 1e-055
gb|BF264380.2|BF264380 HV_CEa0009E08f Hordeum vulgare seedl... 96 2e-055
gb|BF622265.2|BF622265 HVSMEa0002G13f Hordeum vulgare seedl... 134 3e-055
gb|BF625550.2|BF625550 HVSMEa0011E08f Hordeum vulgare seedl... 134 3e-055
gb|BF624618.2|BF624618 HVSMEa0017E14f Hordeum vulgare seedl... 153 9e-055
gb|BG299389.1|BG299389 HVSMEa0019L19f Hordeum vulgare seedl... 139 9e-055
gb|BE195630.3|BE195630 HVSMEh0089P24f Hordeum vulgare 5-45 ... 134 4e-054
gb|BJ548150.1|BJ548150 BJ548150 K. Sato unpublished cDNA li... 101 1e-053
gb|BE421080.1|BE421080 HWM005.F01 ITEC HWM Barley Leaf Libr... 131 5e-053
gb|BF621862.3|BF621862 HVSMEa0001C05f Hordeum vulgare seedl... 153 6e-053
gb|BM817225.1|BM817225 HC109B04_T3.ab1 HC Hordeum vulgare s... 138 7e-052
gb|BE214207.2|BE214207 HV_CEb0002K18f Hordeum vulgare seedl... 135 7e-052
gb|BF629286.3|BF629286 HVSMEb0010K15f Hordeum vulgare seedl... 153 9e-052
gb|BE421272.1|BE421272 HWM007.F01 ITEC HWM Barley Leaf Libr... 131 9e-052
gb|BM375338.2|BM375338 EBem06_SQ003_A18_R embryo, 21 DPA, n... 139 2e-051
gb|BF622591.2|BF622591 HVSMEa0007C21f Hordeum vulgare seedl... 141 3e-051
gb|BF257478.2|BF257478 HVSMEf0013A10f Hordeum vulgare seedl... 134 6e-051
gb|BG299731.1|BG299731 HVSMEa0021J09f Hordeum vulgare seedl... 153 3e-050
gb|BQ466487.1|BQ466487 HT02K21r HT Hordeum vulgare subsp. v... 153 2e-049
gb|BQ471126.1|BQ471126 HV01D06T HV Hordeum vulgare subsp. v... 127 3e-049
gb|BM816911.1|BM816911 HB106C10_SK.ab1 HB Hordeum vulgare s... 113 6e-049
gb|BF259078.2|BF259078 HVSMEf0017J19f Hordeum vulgare seedl... 107 1e-048
gb|AL503233.1|AL503233 AL503233 Hordeum vulgare Barke roots... 117 2e-048
gb|BF625970.2|BF625970 HVSMEa0015B01f Hordeum vulgare seedl... 141 1e-047
gb|BI949438.1|BI949438 HVSMEl0013O11f Hordeum vulgare spike... 118 2e-047
gb|BF624202.2|BF624202 HVSMEa0012J22f Hordeum vulgare seedl... 153 2e-047
gb|BF631562.2|BF631562 HVSMEb0016G15f Hordeum vulgare seedl... 134 3e-047
gb|BF622512.2|BF622512 HVSMEa0004K18f Hordeum vulgare seedl... 152 4e-047
gb|BF621473.2|BF621473 HVSMEa0011B16f Hordeum vulgare seedl... 137 1e-046
gb|BF626678.2|BF626678 HVSMEb0001A21f Hordeum vulgare seedl... 131 3e-046
gb|BF622191.2|BF622191 HVSMEa0001P16f Hordeum vulgare seedl... 153 4e-046
gb|CA006848.1|CA006848 HU05N24r HU Hordeum vulgare subsp. v... 138 1e-045
gb|BF623830.2|BF623830 HVSMEa0007D03f Hordeum vulgare seedl... 126 1e-044
gb|BJ548512.1|BJ548512 BJ548512 K. Sato unpublished cDNA li... 92 4e-044
gb|BQ467879.1|BQ467879 HR01D11r HR Hordeum vulgare subsp. v... 138 6e-044
gb|BU989585.1|BU989585 HF22C07r HF Hordeum vulgare subsp. v... 135 9e-043
gb|BG368482.1|BG368482 HVSMEi0019D10f Hordeum vulgare 20 DA... 131 1e-042
gb|AL505815.1|AL505815 AL505815 Hordeum vulgare Barke roots... 141 1e-042
gb|BF065184.1|BF065184 HV_CEb0023O18f Hordeum vulgare seedl... 137 2e-042
gb|CA025935.1|CA025935 HZ53J07r HZ Hordeum vulgare subsp. v... 95 3e-042
gb|BI949614.1|BI949614 HVSMEl0014O15f Hordeum vulgare spike... 131 4e-042
gb|BE602564.3|BE602564 HVSMEh0100A01f Hordeum vulgare 5-45 ... 131 4e-042
gb|BM369733.2|BM369733 EBem07_SQ004_H07_R embryo, 28 DPA, n... 132 4e-042
gb|BE214393.3|BE214393 HV_CEb0003F04f Hordeum vulgare seedl... 92 4e-042
gb|BJ548403.1|BJ548403 BJ548403 K. Sato unpublished cDNA li... 92 1e-041
gb|BJ548926.1|BJ548926 BJ548926 K. Sato unpublished cDNA li... 92 1e-041
gb|BI948082.1|BI948082 HVSMEl0008C04f Hordeum vulgare spike... 130 1e-041
gb|BQ471258.1|BQ471258 HV01N17T HV Hordeum vulgare subsp. v... 114 2e-041
gb|BF627874.2|BF627874 HVSMEb0006C01f Hordeum vulgare seedl... 131 3e-041
gb|BJ548749.1|BJ548749 BJ548749 K. Sato unpublished cDNA li... 92 4e-041
gb|BI950533.1|BI950533 HVSMEl0021D14f Hordeum vulgare spike... 116 4e-041
gb|BG299804.2|BG299804 HVSMEa0021O04f Hordeum vulgare seedl... 149 4e-041
gb|BF066033.2|BF066033 HV_CEb0014K12f Hordeum vulgare seedl... 86 7e-041
gb|BG299996.1|BG299996 HVSMEa0022O20f Hordeum vulgare seedl... 115 8e-041
gb|BQ465287.1|BQ465287 HU03D01r HU Hordeum vulgare subsp. v... 116 9e-041
gb|CA012539.1|CA012539 HT05L11r HT Hordeum vulgare subsp. v... 116 9e-041
gb|BQ472178.1|BQ472178 HV04K06r HV Hordeum vulgare subsp. v... 127 1e-040
gb|BJ549023.1|BJ549023 BJ549023 K. Sato unpublished cDNA li... 92 2e-040
gb|AV936388.1|AV936388 AV936388 K. Sato unpublished cDNA li... 92 2e-040
gb|BJ548710.1|BJ548710 BJ548710 K. Sato unpublished cDNA li... 92 2e-040
gb|BI949114.1|BI949114 HVSMEl0012G22f Hordeum vulgare spike... 129 6e-040
gb|BJ548248.1|BJ548248 BJ548248 K. Sato unpublished cDNA li... 80 8e-040
gb|BF623190.3|BF623190 HVSMEa0015C04f Hordeum vulgare seedl... 114 1e-039
gb|BF623248.2|BF623248 HVSMEa0016A09f Hordeum vulgare seedl... 145 2e-039
gb|BJ547042.1|BJ547042 BJ547042 K. Sato unpublished cDNA li... 131 2e-039
gb|BJ547797.1|BJ547797 BJ547797 K. Sato unpublished cDNA li... 131 2e-039
gb|BJ547881.1|BJ547881 BJ547881 K. Sato unpublished cDNA li... 131 2e-039
gb|AV926646.1|AV926646 AV926646 K. Sato unpublished cDNA li... 131 2e-039
gb|BJ547768.1|BJ547768 BJ547768 K. Sato unpublished cDNA li... 131 2e-039
gb|BE216017.1|BE216017 HV_CEb0009C05f Hordeum vulgare seedl... 131 2e-039
gb|BJ547685.1|BJ547685 BJ547685 K. Sato unpublished cDNA li... 131 2e-039
gb|AV934138.1|AV934138 AV934138 K. Sato unpublished cDNA li... 131 2e-039
gb|BJ547661.1|BJ547661 BJ547661 K. Sato unpublished cDNA li... 131 2e-039
gb|BJ469586.1|BJ469586 BJ469586 K. Sato unpublished cDNA li... 131 2e-039
gb|BJ547290.1|BJ547290 BJ547290 K. Sato unpublished cDNA li... 131 2e-039
gb|BJ547528.1|BJ547528 BJ547528 K. Sato unpublished cDNA li... 131 2e-039
gb|AV933046.1|AV933046 AV933046 K. Sato unpublished cDNA li... 131 2e-039
gb|BJ547269.1|BJ547269 BJ547269 K. Sato unpublished cDNA li... 131 2e-039
gb|BJ547507.1|BJ547507 BJ547507 K. Sato unpublished cDNA li... 131 2e-039
gb|BJ546949.1|BJ546949 BJ546949 K. Sato unpublished cDNA li... 131 2e-039
gb|AV923424.1|AV923424 AV923424 K. Sato unpublished cDNA li... 131 2e-039
gb|BJ546871.1|BJ546871 BJ546871 K. Sato unpublished cDNA li... 131 2e-039
gb|BJ547611.1|BJ547611 BJ547611 K. Sato unpublished cDNA li... 131 2e-039
gb|AV926802.1|AV926802 AV926802 K. Sato unpublished cDNA li... 131 2e-039
gb|AV924773.1|AV924773 AV924773 K. Sato unpublished cDNA li... 131 2e-039
gb|BI953138.1|BI953138 HVSMEm0011D12f Hordeum vulgare green... 131 2e-039
gb|BF255920.2|BF255920 HVSMEf0008D10f Hordeum vulgare seedl... 102 3e-039
gb|BF622486.2|BF622486 HVSMEa0004I15f Hordeum vulgare seedl... 118 4e-039
gb|AV923513.1|AV923513 AV923513 K. Sato unpublished cDNA li... 131 5e-039
gb|BI778185.2|BI778185 EBro07_SQ002_H11_R root, 3 week, red... 129 9e-039
gb|AL504826.1|AL504826 AL504826 Hordeum vulgare Barke roots... 139 9e-039
gb|BG342989.2|BG342989 HVSMEg0001J14f Hordeum vulgare pre-a... 131 2e-038
gb|AL450842.1|AL450842 AL450842 Hordeum vulgare Barke etiol... 146 2e-038
gb|BI953646.1|BI953646 HVSMEm0013K24f Hordeum vulgare green... 131 3e-038
gb|BI948427.1|BI948427 HVSMEl0009I08f Hordeum vulgare spike... 129 3e-038
gb|AV935988.1|AV935988 AV935988 K. Sato unpublished cDNA li... 92 3e-038
gb|BJ547998.1|BJ547998 BJ547998 K. Sato unpublished cDNA li... 92 3e-038
gb|BF625851.2|BF625851 HVSMEa0013N14f Hordeum vulgare seedl... 125 1e-037
gb|AV934268.1|AV934268 AV934268 K. Sato unpublished cDNA li... 131 1e-037
gb|AV926037.1|AV926037 AV926037 K. Sato unpublished cDNA li... 131 1e-037
gb|AV925064.1|AV925064 AV925064 K. Sato unpublished cDNA li... 131 1e-037
gb|BJ548529.1|BJ548529 BJ548529 K. Sato unpublished cDNA li... 92 1e-037
gb|BI954235.1|BI954235 HVSMEm0016M03f Hordeum vulgare green... 96 1e-037
gb|BJ548320.1|BJ548320 BJ548320 K. Sato unpublished cDNA li... 92 1e-037
gb|AV927871.1|AV927871 AV927871 K. Sato unpublished cDNA li... 92 1e-037
gb|BF263502.3|BF263502 HV_CEa0006O15f Hordeum vulgare seedl... 118 2e-037
gb|BQ765875.1|BQ765875 EBro03_SQ008_M07_R root, 3 week, wat... 134 3e-037
gb|BF623386.2|BF623386 HVSMEa0016I09f Hordeum vulgare seedl... 116 3e-037
gb|AV933552.1|AV933552 AV933552 K. Sato unpublished cDNA li... 131 4e-037
gb|CA012898.1|CA012898 HT06M15r HT Hordeum vulgare subsp. v... 60 4e-037
gb|BJ548174.1|BJ548174 BJ548174 K. Sato unpublished cDNA li... 92 4e-037
gb|BJ548536.1|BJ548536 BJ548536 K. Sato unpublished cDNA li... 92 4e-037
gb|AV937000.1|AV937000 AV937000 K. Sato unpublished cDNA li... 92 4e-037
gb|BI952081.1|BI952081 HVSMEm0004I21f Hordeum vulgare green... 129 6e-037
gb|BI947723.1|BI947723 HVSMEl0006J20f Hordeum vulgare spike... 115 8e-037
gb|BF259796.2|BF259796 HVSMEf0020E15f Hordeum vulgare seedl... 72 8e-037
gb|BF622044.2|BF622044 HVSMEa0001J20f Hordeum vulgare seedl... 114 8e-037
gb|AV929870.1|AV929870 AV929870 K. Sato unpublished cDNA li... 92 1e-036
gb|BF267193.3|BF267193 HV_CEa0017D12f Hordeum vulgare seedl... 112 9e-036
gb|AV924070.1|AV924070 AV924070 K. Sato unpublished cDNA li... 112 1e-035
gb|BF623987.2|BF623987 HVSMEa0008F14f Hordeum vulgare seedl... 96 2e-035
gb|AV936609.1|AV936609 AV936609 K. Sato unpublished cDNA li... 92 3e-035
gb|BF065899.1|BF065899 HV_CEb0014E21f Hordeum vulgare seedl... 114 6e-035
gb|BF065922.1|BF065922 HV_CEb0014F21f Hordeum vulgare seedl... 114 6e-035
gb|BF065944.1|BF065944 HV_CEb0014G19f Hordeum vulgare seedl... 114 1e-034
gb|BF065968.1|BF065968 HV_CEb0014H19f Hordeum vulgare seedl... 114 1e-034
gb|BQ763153.1|BQ763153 EBro02_SQ007_K08_R root, 3 week, hyd... 107 2e-034
gb|BQ664112.1|BQ664112 HV01N17w HV Hordeum vulgare subsp. v... 102 2e-034
gb|AF109194.1|AF109194 Hordeum vulgare glutathione-S-transf... 76 2e-034
gb|BF620788.2|BF620788 HVSMEc0020N16f Hordeum vulgare seedl... 76 2e-034
gb|BE558770.2|BE558770 HV_CEb0020E13f Hordeum vulgare seedl... 76 2e-034
gb|CK122333.1|CK122333 BES1824102o06 BES1824 Hordeum vulgar... 76 2e-034
gb|BI959586.1|BI959586 HVSMEn0020E21f Hordeum vulgare rachi... 76 2e-034
gb|CA028145.1|CA028145 HZ61C04r HZ Hordeum vulgare subsp. v... 76 2e-034
gb|CA024893.1|CA024893 HZ50K02r HZ Hordeum vulgare subsp. v... 76 2e-034
gb|BQ460114.1|BQ460114 HA07C20r HA Hordeum vulgare subsp. v... 76 2e-034
gb|CA001613.1|CA001613 HS05B06r HS Hordeum vulgare subsp. v... 76 2e-034
gb|BE559055.2|BE559055 HV_CEb0022I16f Hordeum vulgare seedl... 111 3e-034
gb|CA014271.1|CA014271 HT10O05r HT Hordeum vulgare subsp. v... 74 4e-034
gb|CA014093.1|CA014093 HT10F20r HT Hordeum vulgare subsp. v... 74 4e-034
gb|CA014392.1|CA014392 HT11D14r HT Hordeum vulgare subsp. v... 74 4e-034
gb|BQ464763.1|BQ464763 HU01G03T HU Hordeum vulgare subsp. v... 74 4e-034
gb|CA013624.1|CA013624 HT09A14r HT Hordeum vulgare subsp. v... 74 4e-034
gb|CA015258.1|CA015258 HT13M04r HT Hordeum vulgare subsp. v... 74 4e-034
gb|CA015289.1|CA015289 HT13N17r HT Hordeum vulgare subsp. v... 74 4e-034
gb|CA015590.1|CA015590 HT14M12r HT Hordeum vulgare subsp. v... 74 4e-034
gb|CA015381.1|CA015381 HT14C07r HT Hordeum vulgare subsp. v... 74 4e-034
gb|BF624504.3|BF624504 HVSMEa0016N24f Hordeum vulgare seedl... 144 6e-034
gb|BF619363.2|BF619363 HVSMEc0016M05f Hordeum vulgare seedl... 76 7e-034
gb|BI952820.1|BI952820 HVSMEm0007N21f Hordeum vulgare green... 76 7e-034
gb|BM442945.2|BM442945 EBro02_SQ001_P16_R root, 3 week, hyd... 144 8e-034
gb|BE214864.3|BE214864 HV_CEb0004O15f Hordeum vulgare seedl... 104 2e-033
gb|BE196654.3|BE196654 HVSMEh0092O09f Hordeum vulgare 5-45 ... 76 2e-033
gb|CV058333.1|CV058333 BNEL36h8 Barley EST endosperm librar... 91 4e-033
gb|CV060337.1|CV060337 BNEL57a4 Barley EST endosperm librar... 91 4e-033
gb|BF265689.1|BF265689 HV_CEa0013B06f Hordeum vulgare seedl... 76 4e-033
gb|BF258539.2|BF258539 HVSMEf0016A04f Hordeum vulgare seedl... 106 5e-033
gb|BQ766637.1|BQ766637 EBro08_SQ006_N18_R root, 3 week, dro... 104 5e-033
gb|BF260845.2|BF260845 HVSMEf0023B13f Hordeum vulgare seedl... 111 6e-033
gb|AV932402.1|AV932402 AV932402 K. Sato unpublished cDNA li... 131 7e-033
gb|BF253803.2|BF253803 HVSMEf0002C17f Hordeum vulgare seedl... 106 9e-033
gb|CA007742.1|CA007742 HU08O02r HU Hordeum vulgare subsp. v... 116 9e-033
gb|BF257698.2|BF257698 HVSMEf0013K02f Hordeum vulgare seedl... 116 9e-033
gb|BF065604.1|BF065604 HV_CEb0012O15f Hordeum vulgare seedl... 111 1e-032
gb|CA017465.1|CA017465 HV05E15r HV Hordeum vulgare subsp. v... 116 1e-032
gb|CA017476.1|CA017476 HV05F04r HV Hordeum vulgare subsp. v... 116 1e-032
gb|CA019652.1|CA019652 HV12K19r HV Hordeum vulgare subsp. v... 116 1e-032
gb|BE216520.1|BE216520 HV_CEb0010L11f Hordeum vulgare seedl... 113 2e-032
gb|BF266117.2|BF266117 HV_CEa0014D16f Hordeum vulgare seedl... 113 2e-032
gb|BE215757.1|BE215757 HV_CEb0008G14f Hordeum vulgare seedl... 113 2e-032
gb|BF267384.2|BF267384 HV_CEa0017M06f Hordeum vulgare seedl... 112 2e-032
gb|BF256380.2|BF256380 HVSMEf0009H03f Hordeum vulgare seedl... 139 3e-032
gb|BJ471554.1|BJ471554 BJ471554 K. Sato unpublished cDNA li... 76 4e-032
gb|BI960661.1|BI960661 HVSMEn0025K13f Hordeum vulgare rachi... 133 5e-032
gb|BJ547849.1|BJ547849 BJ547849 K. Sato unpublished cDNA li... 131 5e-032
gb|BJ547072.1|BJ547072 BJ547072 K. Sato unpublished cDNA li... 131 5e-032
gb|AV923925.1|AV923925 AV923925 K. Sato unpublished cDNA li... 131 5e-032
gb|AV922724.1|AV922724 AV922724 K. Sato unpublished cDNA li... 103 5e-032
gb|BI953615.1|BI953615 HVSMEm0013J07f Hordeum vulgare green... 96 8e-032
gb|BF625356.2|BF625356 HVSMEa0008J19f Hordeum vulgare seedl... 137 9e-032
gb|CA027668.1|CA027668 HZ59K12r HZ Hordeum vulgare subsp. v... 84 9e-032
gb|AV931694.1|AV931694 AV931694 K. Sato unpublished cDNA li... 79 1e-031
gb|BI954877.1|BI954877 HVSMEm0020D03f Hordeum vulgare green... 96 1e-031
gb|CA012182.1|CA012182 HT04L19r HT Hordeum vulgare subsp. v... 76 1e-031
gb|BQ467510.1|BQ467510 HS04A05r HS Hordeum vulgare subsp. v... 76 1e-031
gb|BF625649.2|BF625649 HVSMEa0013B21f Hordeum vulgare seedl... 76 1e-031
gb|BQ467646.1|BQ467646 HS04G23r HS Hordeum vulgare subsp. v... 76 1e-031
gb|CA029484.1|CA029484 HZ65F17r HZ Hordeum vulgare subsp. v... 76 1e-031
gb|BQ765092.1|BQ765092 EBca01_SQ005_D19_R carpel, pre-anthe... 76 1e-031
gb|BI776549.2|BI776549 EBpi05_SQ001_N14_R pistil, 8 DPA, no... 76 1e-031
gb|CA001781.1|CA001781 HS05J03r HS Hordeum vulgare subsp. v... 76 1e-031
gb|CA023217.1|CA023217 HZ45J07r HZ Hordeum vulgare subsp. v... 76 1e-031
gb|BE411006.1|BE411006 ISC001.D03F990519 ITEC ISC Barley Le... 110 2e-031
gb|BJ548976.1|BJ548976 BJ548976 K. Sato unpublished cDNA li... 92 2e-031
gb|AV936756.1|AV936756 AV936756 K. Sato unpublished cDNA li... 92 2e-031
gb|BJ546858.1|BJ546858 BJ546858 K. Sato unpublished cDNA li... 131 2e-031
gb|BJ547741.1|BJ547741 BJ547741 K. Sato unpublished cDNA li... 131 2e-031
gb|BF259210.2|BF259210 HVSMEf0018C22f Hordeum vulgare seedl... 84 3e-031
gb|BQ763720.1|BQ763720 EBro03_SQ005_A10_R root, 3 week, wat... 84 3e-031
gb|BF260718.2|BF260718 HVSMEf0022M04f Hordeum vulgare seedl... 105 3e-031
gb|BF065573.1|BF065573 HV_CEb0012M23f Hordeum vulgare seedl... 112 3e-031
gb|CA012122.1|CA012122 HT04I07r HT Hordeum vulgare subsp. v... 60 3e-031
gb|BM369749.2|BM369749 EBem07_SQ004_H24_R embryo, 28 DPA, n... 76 4e-031
gb|BF256426.3|BF256426 HVSMEf0009J14f Hordeum vulgare seedl... 122 4e-031
gb|BJ546043.1|BJ546043 BJ546043 K. Sato unpublished cDNA li... 95 4e-031
gb|BJ545696.1|BJ545696 BJ545696 K. Sato unpublished cDNA li... 95 4e-031
gb|BJ546968.1|BJ546968 BJ546968 K. Sato unpublished cDNA li... 131 8e-031
gb|BJ547144.1|BJ547144 BJ547144 K. Sato unpublished cDNA li... 131 8e-031
gb|CA003018.1|CA003018 HS09C19r HS Hordeum vulgare subsp. v... 134 8e-031
gb|CA004080.1|CA004080 HS16H17r HS Hordeum vulgare subsp. v... 74 2e-030
gb|BI947132.1|BI947132 HVSMEl0003N16f Hordeum vulgare spike... 127 3e-030
gb|BG299590.1|BG299590 HVSMEa0020O20f Hordeum vulgare seedl... 57 3e-030
gb|BJ546927.1|BJ546927 BJ546927 K. Sato unpublished cDNA li... 103 3e-030
gb|AV932609.1|AV932609 AV932609 K. Sato unpublished cDNA li... 76 4e-030
gb|BU998635.1|BU998635 HI11L03r HI Hordeum vulgare subsp. v... 100 4e-030
gb|BI948705.1|BI948705 HVSMEl0010J03f Hordeum vulgare spike... 74 4e-030
gb|BI948019.1|BI948019 HVSMEl0007N21f Hordeum vulgare spike... 131 6e-030
gb|AV926829.1|AV926829 AV926829 K. Sato unpublished cDNA li... 131 6e-030
gb|BJ546861.1|BJ546861 BJ546861 K. Sato unpublished cDNA li... 131 6e-030
gb|BJ547544.1|BJ547544 BJ547544 K. Sato unpublished cDNA li... 131 6e-030
gb|BJ547767.1|BJ547767 BJ547767 K. Sato unpublished cDNA li... 131 6e-030
gb|BF623684.2|BF623684 HVSMEa0003M02f Hordeum vulgare seedl... 74 6e-030
gb|BF255189.1|BF255189 HVSMEf0006D04f Hordeum vulgare seedl... 100 8e-030
gb|BF268066.2|BF268066 HV_CEa0019M05f Hordeum vulgare seedl... 70 2e-029
gb|AV918927.1|AV918927 AV918927 K. Sato unpublished cDNA li... 60 2e-029
gb|BF267688.2|BF267688 HV_CEa0018J20f Hordeum vulgare seedl... 62 2e-029
gb|AV928806.1|AV928806 AV928806 K. Sato unpublished cDNA li... 73 2e-029
gb|AV933636.1|AV933636 AV933636 K. Sato unpublished cDNA li... 129 3e-029
gb|BJ546903.1|BJ546903 BJ546903 K. Sato unpublished cDNA li... 129 3e-029
gb|BJ547398.1|BJ547398 BJ547398 K. Sato unpublished cDNA li... 129 3e-029
gb|BF622296.2|BF622296 HVSMEa0002K01f Hordeum vulgare seedl... 94 3e-029
gb|BF622298.2|BF622298 HVSMEa0002K03f Hordeum vulgare seedl... 94 3e-029
gb|BI949974.1|BI949974 HVSMEl0017G12f Hordeum vulgare spike... 74 5e-029
gb|BJ548840.1|BJ548840 BJ548840 K. Sato unpublished cDNA li... 92 6e-029
gb|BJ548533.1|BJ548533 BJ548533 K. Sato unpublished cDNA li... 92 6e-029
gb|BJ547972.1|BJ547972 BJ547972 K. Sato unpublished cDNA li... 92 6e-029
gb|AV931720.1|AV931720 AV931720 K. Sato unpublished cDNA li... 92 6e-029
gb|BF619549.2|BF619549 HVSMEc0004A15f Hordeum vulgare seedl... 75 7e-029
gb|BE602348.2|BE602348 HVSMEh0098J09f Hordeum vulgare 5-45 ... 127 1e-028
gb|BJ547109.1|BJ547109 BJ547109 K. Sato unpublished cDNA li... 127 1e-028
gb|BM375129.2|BM375129 EBem06_SQ002_H03_R embryo, 21 DPA, n... 101 1e-028
gb|BF258410.2|BF258410 HVSMEf0015K10f Hordeum vulgare seedl... 57 1e-028
gb|BJ548842.1|BJ548842 BJ548842 K. Sato unpublished cDNA li... 91 2e-028
gb|BI949705.1|BI949705 HVSMEl0015H08f Hordeum vulgare spike... 57 2e-028
gb|BF253797.2|BF253797 HVSMEf0002C11f Hordeum vulgare seedl... 105 2e-028
gb|BF624808.3|BF624808 HVSMEa0017M20f Hordeum vulgare seedl... 57 3e-028
gb|BF257083.2|BF257083 HVSMEf0011M23f Hordeum vulgare seedl... 57 3e-028
gb|BF623361.2|BF623361 HVSMEa0015I24f Hordeum vulgare seedl... 94 3e-028
gb|BM442923.2|BM442923 EBro02_SQ001_N17_R root, 3 week, hyd... 105 4e-028
gb|BF259240.3|BF259240 HVSMEf0018G18f Hordeum vulgare seedl... 84 9e-028
gb|BE215347.2|BE215347 HV_CEb0006I19f Hordeum vulgare seedl... 118 1e-027
gb|BQ466342.1|BQ466342 HT02E05r HT Hordeum vulgare subsp. v... 74 2e-027
gb|BQ466475.1|BQ466475 HT02K07r HT Hordeum vulgare subsp. v... 74 2e-027
gb|BQ466550.1|BQ466550 HT02N19r HT Hordeum vulgare subsp. v... 74 2e-027
gb|CA018522.1|CA018522 HV08O01r HV Hordeum vulgare subsp. v... 87 3e-027
gb|BI949279.1|BI949279 HVSMEl0013C05f Hordeum vulgare spike... 122 3e-027
gb|BF625840.2|BF625840 HVSMEa0013N01f Hordeum vulgare seedl... 118 4e-027
gb|BE196145.3|BE196145 HVSMEh0091H19f Hordeum vulgare 5-45 ... 75 4e-027
gb|BF623115.2|BF623115 HVSMEa0014H14f Hordeum vulgare seedl... 74 7e-027
gb|BI947656.1|BI947656 HVSMEl0006E19f Hordeum vulgare spike... 54 1e-026
gb|BI955294.1|BI955294 HVSMEm0022F18f Hordeum vulgare green... 80 1e-026
gb|BF258960.3|BF258960 HVSMEf0017C18f Hordeum vulgare seedl... 116 2e-026
gb|BI950563.1|BI950563 HVSMEl0021F15f Hordeum vulgare spike... 82 3e-026
gb|CA027026.1|CA027026 HZ57K21r HZ Hordeum vulgare subsp. v... 76 4e-026
gb|BE214034.1|BE214034 HV_CEb0001P12f Hordeum vulgare seedl... 118 4e-026
gb|BI947729.1|BI947729 HVSMEl0006K08f Hordeum vulgare spike... 118 4e-026
gb|CA027071.1|CA027071 HZ57M23r HZ Hordeum vulgare subsp. v... 85 5e-026
gb|BF624576.2|BF624576 HVSMEa0017C18f Hordeum vulgare seedl... 118 6e-026
gb|BF623533.3|BF623533 HVSMEa0002J15f Hordeum vulgare seedl... 118 6e-026
gb|BF628237.2|BF628237 HVSMEb0003H24f Hordeum vulgare seedl... 118 6e-026
gb|BI946932.1|BI946932 HVSMEl0002N24f Hordeum vulgare spike... 118 6e-026
gb|BE215069.1|BE215069 HV_CEb0005L08f Hordeum vulgare seedl... 118 6e-026
gb|BE216829.1|BE216829 HV_CEb0011L16f Hordeum vulgare seedl... 118 6e-026
gb|BF630948.3|BF630948 HVSMEb0014I05f Hordeum vulgare seedl... 118 6e-026
gb|BQ740072.1|BQ740072 HC04F04 HC Hordeum vulgare subsp. vu... 118 6e-026
gb|CA029001.1|CA029001 HZ63O10r HZ Hordeum vulgare subsp. v... 76 9e-026
gb|CA028873.1|CA028873 HZ63H22r HZ Hordeum vulgare subsp. v... 76 9e-026
gb|CA027925.1|CA027925 HZ60H09r HZ Hordeum vulgare subsp. v... 76 9e-026
gb|BI777370.2|BI777370 EBro04_SQ001_A06_R root, 3 week, sal... 82 1e-025
gb|CA017560.1|CA017560 HV05I24r HV Hordeum vulgare subsp. v... 116 1e-025
gb|CA004703.1|CA004703 HS18G22r HS Hordeum vulgare subsp. v... 116 3e-025
gb|BJ548020.1|BJ548020 BJ548020 K. Sato unpublished cDNA li... 80 3e-025
gb|BJ548881.1|BJ548881 BJ548881 K. Sato unpublished cDNA li... 80 3e-025
gb|BQ469646.1|BQ469646 HZ01H04r HZ Hordeum vulgare subsp. v... 84 3e-025
gb|BJ548805.1|BJ548805 BJ548805 K. Sato unpublished cDNA li... 79 4e-025
gb|BF255868.2|BF255868 HVSMEf0008A20f Hordeum vulgare seedl... 66 8e-025
gb|BF253897.2|BF253897 HVSMEf0002G20f Hordeum vulgare seedl... 113 1e-024
gb|CA004785.1|CA004785 HS18K23r HS Hordeum vulgare subsp. v... 74 2e-024
gb|BF622945.3|BF622945 HVSMEa0012E03f Hordeum vulgare seedl... 112 3e-024
gb|BF623515.3|BF623515 HVSMEa0002H21f Hordeum vulgare seedl... 76 4e-024
gb|BI948891.1|BI948891 HVSMEl0011E18f Hordeum vulgare spike... 111 5e-024
gb|BF626467.2|BF626467 HVSMEa0018H19f Hordeum vulgare seedl... 111 9e-024
gb|CV058068.1|CV058068 BNEL34a12 Barley EST endosperm libra... 91 9e-024
gb|BF267015.2|BF267015 HV_CEa0016L05f Hordeum vulgare seedl... 83 9e-024
gb|BQ767689.1|BQ767689 EBro08_SQ009_H13_R root, 3 week, dro... 86 9e-024
gb|BF624359.3|BF624359 HVSMEa0014E11f Hordeum vulgare seedl... 94 2e-023
gb|CA025920.1|CA025920 HZ53I14r HZ Hordeum vulgare subsp. v... 73 4e-023
gb|BF255671.2|BF255671 HVSMEf0007H20f Hordeum vulgare seedl... 48 6e-023
gb|BF254945.2|BF254945 HVSMEf0005H21f Hordeum vulgare seedl... 74 6e-023
gb|BI951922.1|BI951922 HVSMEm0003M11f Hordeum vulgare green... 77 6e-023
gb|AV910856.1|AV910856 AV910856 K. Sato unpublished cDNA li... 68 8e-023
gb|AW982768.2|AW982768 HVSMEg0004C16f Hordeum vulgare pre-a... 80 2e-022
gb|BQ767833.1|BQ767833 EBro08_SQ009_P23 _R root, 3 week, dr... 68 3e-022
gb|CA018052.1|CA018052 HV07E12r HV Hordeum vulgare subsp. v... 66 3e-022
gb|BG415869.2|BG415869 HVSMEk0008G04f Hordeum vulgare testa... 105 3e-022
gb|BE216067.2|BE216067 HV_CEb0009E21f Hordeum vulgare seedl... 52 3e-022
gb|BG415059.1|BG415059 HVSMEk0004P20f Hordeum vulgare testa... 54 2e-021
gb|BQ766061.1|BQ766061 EBro03_SQ008_N21_R root, 3 week, wat... 50 2e-021
gb|AV930169.1|AV930169 AV930169 K. Sato unpublished cDNA li... 61 4e-021
gb|BJ548395.1|BJ548395 BJ548395 K. Sato unpublished cDNA li... 66 5e-021
gb|AV834582.1|AV834582 AV834582 K. Sato unpublished cDNA li... 51 5e-021
gb|AV928835.1|AV928835 AV928835 K. Sato unpublished cDNA li... 61 6e-021
gb|AV936523.1|AV936523 AV936523 K. Sato unpublished cDNA li... 61 6e-021
gb|AJ435107.1|AJ435107 AJ435107 S00002 Hordeum vulgare subs... 57 8e-021
gb|BI946599.1|BI946599 HVSMEl0001A18f Hordeum vulgare spike... 66 9e-021
>gb|CA013731.1|CA013731 HT09F05r HT Hordeum vulgare subsp. vulgare cDNA clone HT09F05
5-PRIME, mRNA sequence
Length = 615
Score = 134 bits (288), Expect(3) = 2e-065
Identities = 56/79 (70%), Positives = 67/79 (84%)
Frame = +1 / +3
Query: 106 GKEGLKVLGLQVSPFVLRVCLALNMKGVSYEYVEEDISNKSELLLKSNPVHKKVPVLIHN 285
G+ GLK+LGL VSPFV+RV +AL MK V YEY+E+D+ K ELLLKSNPVH KVPVLIH+
Sbjct: 9 GEGGLKLLGLTVSPFVIRVRMALQMKRVGYEYMEQDLFTKGELLLKSNPVHMKVPVLIHD 188
Query: 286 GKPICESLVIMQYVDELFA 342
GK ICESL I+QYVDE++A
Sbjct: 189 GKSICESLAIVQYVDEVWA 245
Score = 110 bits (234), Expect(4) = 2e-042
Identities = 48/76 (63%), Positives = 56/76 (73%)
Frame = -3 / -2
Query: 342 GEQLVDVLHDDE*LADGLTVVDEHGHLLVHRVGLEQELTLVGYVLLDVLVTHSFHVQRQA 163
G LVDVLHD + LADG VVDEH L VHRVGLE+EL L VLL VLV H+FH+Q A
Sbjct: 245 GPDLVDVLHDGQRLADGFAVVDEHRDLHVHRVGLEEELALGEQVLLHVLVAHAFHLQCHA 66
Query: 162 HAEHERAHLQAEDLKT 115
+ +HERAH QA+ L+T
Sbjct: 65 YTDHERAHRQAQQLQT 18
Score = 102 bits (218), Expect(3) = 2e-065
Identities = 40/82 (48%), Positives = 48/82 (58%)
Frame = +1 / +3
Query: 343 GRPILPTDPYERATARFWAAYADDKLFPAWYGMVXXXXXXXXXXXXXXXXXXIEHMEVTF 522
G ILP DPY+RA ARFWAAYAD KL PAW G++ I +E F
Sbjct: 252 GTSILPADPYDRAAARFWAAYADSKLLPAWVGIMWRPTEEERAEKVGDTLAAIGQLEEAF 431
Query: 523 AKCSGGNAFFGGDSIGYVDIVL 588
KCS G FF GDS+GY+D+V+
Sbjct: 432 GKCSNGKPFFAGDSVGYLDLVV 497
Score = 63.8 bits (133), Expect(3) = 7e-024
Identities = 28/55 (50%), Positives = 33/55 (60%)
Frame = -2 / -1
Query: 295 WAYRCG*ARAPSCAPGWT*AGAHSCWICPPRRTRNSLLSCSAPSTRGARTGSPAG 131
W R G*A PSCAPGWT* GA P TR+ +S + P G+RTGSP+G
Sbjct: 198 WICRRG*APGPSCAPGWT*GGARPW*TGPAPCTRSPRVSSAVPCVHGSRTGSPSG 34
Score = 52.8 bits (109), Expect(3) = 7e-024
Identities = 27/53 (50%), Positives = 33/53 (62%)
Frame = -1 / -3
Query: 440 MPYHAGNNLSSA*AAQKRAVARS*GSVGRIGRPANSSSTYCMMTSDSQMGLPL 282
MP HAG +L SA*AAQKRA ARS*GS GR+ P + ++ T S + L
Sbjct: 349 MPTHAGKSLLSA*AAQKRAAARS*GSAGRMEVPVAAQTSSTYCTMASDSQMDL 191
Score = 51.0 bits (105), Expect(3) = 2e-065
Identities = 18/36 (50%), Positives = 26/36 (72%)
Frame = +3 / +3
Query: 591 VLGSFLFWFEAVRRVFDLEIINASKTPLLAAWAERF 698
V+GS L WFE +R++F + +I A + P LAAW +RF
Sbjct: 492 VVGSQLLWFEVLRKMFGVVVIEACRAPFLAAWVKRF 599
Score = 50.6 bits (104), Expect(4) = 2e-042
Identities = 21/31 (67%), Positives = 24/31 (77%)
Frame = -3 / -2
Query: 444 HHAVPRWKQLVVGVGSPEASSGALVGVGWED 352
H A PR ++L VGVG PEAS GA+VGVG ED
Sbjct: 353 HDAHPRRQELAVGVGGPEASGGAVVGVGGED 261
Score = 37.7 bits (76), Expect(4) = 2e-042
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = -1 / -2
Query: 698 KPLRPRSQQRSLASVNDLQVENPAHRLEPEQ 606
KPL PR Q+ S A +ND E+ LEPEQ
Sbjct: 599 KPLHPRGQEGSPAGLNDHDAEHLPQHLEPEQ 507
Score = 35.4 bits (71), Expect(3) = 7e-024
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = -2 / -3
Query: 709 TVPTNRSAHAANSGVLLALMISRSKTLRTASNQNKKEP 596
+V NR HAA G L A M + R+ SNQ+ EP
Sbjct: 610 SVSQNRFTHAAKKGALQASMTTTPNIFRSTSNQSNCEP 497
Score = 30.9 bits (61), Expect(4) = 2e-042
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = -1 / -3
Query: 587 STMST*PMESPPKKALPPEHLAKVTS 510
+T S *P ESP KK P EH +S
Sbjct: 496 TTRSR*PTESPAKKGFPLEHFPNASS 419
>gb|BJ544235.1|BJ544235 BJ544235 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak22d17 5', mRNA sequence
Length = 606
Score = 132 bits (283), Expect(3) = 4e-065
Identities = 55/76 (72%), Positives = 65/76 (85%)
Frame = +1 / +2
Query: 115 GLKVLGLQVSPFVLRVCLALNMKGVSYEYVEEDISNKSELLLKSNPVHKKVPVLIHNGKP 294
GLK+LGL VSPFV+RV +AL MK V YEY+E+D+ K ELLLKSNPVH KVPVLIH+GK
Sbjct: 11 GLKLLGLTVSPFVIRVRMALQMKRVGYEYMEQDLFTKGELLLKSNPVHMKVPVLIHDGKS 190
Query: 295 ICESLVIMQYVDELFA 342
ICESL I+QYVDE++A
Sbjct: 191 ICESLAIVQYVDEVWA 238
Score = 110 bits (234), Expect(3) = 2e-037
Identities = 48/76 (63%), Positives = 56/76 (73%)
Frame = -3 / -3
Query: 342 GEQLVDVLHDDE*LADGLTVVDEHGHLLVHRVGLEQELTLVGYVLLDVLVTHSFHVQRQA 163
G LVDVLHD + LADG VVDEH L VHRVGLE+EL L VLL VLV H+FH+Q A
Sbjct: 238 GPDLVDVLHDGQRLADGFAVVDEHRDLHVHRVGLEEELALGEQVLLHVLVAHAFHLQCHA 59
Query: 162 HAEHERAHLQAEDLKT 115
+ +HERAH QA+ L+T
Sbjct: 58 YTDHERAHRQAQQLQT 11
Score = 104 bits (221), Expect(3) = 4e-065
Identities = 40/82 (48%), Positives = 48/82 (58%)
Frame = +1 / +2
Query: 343 GRPILPTDPYERATARFWAAYADDKLFPAWYGMVXXXXXXXXXXXXXXXXXXIEHMEVTF 522
G ILP DPY+RA ARFWAAYAD KL PAW G++ I +E F
Sbjct: 245 GTSILPADPYDRAAARFWAAYADSKLLPAWVGIMWAATEEERAEKVGDTLAAIGQLEEAF 424
Query: 523 AKCSGGNAFFGGDSIGYVDIVL 588
KCS G FF GDS+GY+D+V+
Sbjct: 425 GKCSNGKPFFAGDSVGYLDLVV 490
Score = 74.4 bits (156), Expect(3) = 3e-031
Identities = 40/102 (39%), Positives = 48/102 (47%)
Frame = -1 / -1
Query: 587 STMST*PMESPPKKALPPEHLAKVTSMCXXXXXXXXXXXXXXXXXXXFTMPYHAGNNLSS 408
+T S *P ESP KK P EH +S MP HAG +L S
Sbjct: 489 TTRSR*PTESPAKKGFPLEHFPNASSSWPIAASVSPTFSALSSSVAAHMMPTHAGKSLLS 310
Query: 407 A*AAQKRAVARS*GSVGRIGRPANSSSTYCMMTSDSQMGLPL 282
A*AAQKRA ARS*GS GR+ P + ++ T S + L
Sbjct: 309 A*AAQKRAAARS*GSAGRMEVPVAAQTSSTYCTMASDSQMDL 184
Score = 63.8 bits (133), Expect(3) = 3e-031
Identities = 28/55 (50%), Positives = 33/55 (60%)
Frame = -2 / -2
Query: 295 WAYRCG*ARAPSCAPGWT*AGAHSCWICPPRRTRNSLLSCSAPSTRGARTGSPAG 131
W R G*A PSCAPGWT* GA P TR+ +S + P G+RTGSP+G
Sbjct: 191 WICRRG*APGPSCAPGWT*GGARPW*TGPAPCTRSPRVSSAVPCVHGSRTGSPSG 27
Score = 51.0 bits (105), Expect(3) = 4e-065
Identities = 18/36 (50%), Positives = 26/36 (72%)
Frame = +3 / +2
Query: 591 VLGSFLFWFEAVRRVFDLEIINASKTPLLAAWAERF 698
V+GS L WFE +R++F + +I A + P LAAW +RF
Sbjct: 485 VVGSQLLWFEVLRKMFGVVVIEACRAPFLAAWVKRF 592
Score = 50.6 bits (104), Expect(3) = 2e-037
Identities = 21/31 (67%), Positives = 24/31 (77%)
Frame = -3 / -3
Query: 444 HHAVPRWKQLVVGVGSPEASSGALVGVGWED 352
H A PR ++L VGVG PEAS GA+VGVG ED
Sbjct: 346 HDAHPRRQELAVGVGGPEASGGAVVGVGGED 254
Score = 37.7 bits (76), Expect(3) = 2e-037
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = -1 / -3
Query: 698 KPLRPRSQQRSLASVNDLQVENPAHRLEPEQ 606
KPL PR Q+ S A +ND E+ LEPEQ
Sbjct: 592 KPLHPRGQEGSPAGLNDHDAEHLPQHLEPEQ 500
Score = 35.4 bits (71), Expect(3) = 3e-031
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = -2 / -1
Query: 709 TVPTNRSAHAANSGVLLALMISRSKTLRTASNQNKKEP 596
+V NR HAA G L A M + R+ SNQ+ EP
Sbjct: 603 SVSQNRFTHAAKKGALQASMTTTPNIFRSTSNQSNCEP 490
>gb|BJ544573.1|BJ544573 BJ544573 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak31o05 5', mRNA sequence
Length = 605
Score = 126 bits (269), Expect(3) = 8e-065
Identities = 52/73 (71%), Positives = 63/73 (86%)
Frame = +1 / +1
Query: 124 VLGLQVSPFVLRVCLALNMKGVSYEYVEEDISNKSELLLKSNPVHKKVPVLIHNGKPICE 303
+LGL VSPFV+RV +AL+MK V YEY+E+D+ K ELLLKSNPVH KVPVLIH+GK ICE
Sbjct: 1 LLGLTVSPFVIRVRMALHMKRVGYEYMEQDLFTKGELLLKSNPVHMKVPVLIHDGKSICE 180
Query: 304 SLVIMQYVDELFA 342
SL I+QYVDE++A
Sbjct: 181 SLAIVQYVDEVWA 219
Score = 105 bits (224), Expect(3) = 7e-039
Identities = 46/72 (63%), Positives = 53/72 (73%)
Frame = -3 / -3
Query: 342 GEQLVDVLHDDE*LADGLTVVDEHGHLLVHRVGLEQELTLVGYVLLDVLVTHSFHVQRQA 163
G LVDVLHD + LADG VVDEH L VHRVGLE+EL L VLL VLV H+FH+Q A
Sbjct: 219 GPDLVDVLHDGQRLADGFAVVDEHRDLHVHRVGLEEELALGEQVLLHVLVAHAFHMQCHA 40
Query: 162 HAEHERAHLQAE 127
+ +HERAH QA+
Sbjct: 39 YTDHERAHRQAQ 4
Score = 104 bits (221), Expect(3) = 8e-065
Identities = 40/82 (48%), Positives = 48/82 (58%)
Frame = +1 / +1
Query: 343 GRPILPTDPYERATARFWAAYADDKLFPAWYGMVXXXXXXXXXXXXXXXXXXIEHMEVTF 522
G ILP DPY+RA ARFWAAYAD KL PAW G++ I +E F
Sbjct: 226 GTSILPADPYDRAAARFWAAYADSKLLPAWVGIMWAATEEERAEKVGDTLAAIGQLEEAF 405
Query: 523 AKCSGGNAFFGGDSIGYVDIVL 588
KCS G FF GDS+GY+D+V+
Sbjct: 406 GKCSNGKPFFAGDSVGYLDLVV 471
Score = 74.4 bits (156), Expect(3) = 4e-034
Identities = 40/102 (39%), Positives = 48/102 (47%)
Frame = -1 / -1
Query: 587 STMST*PMESPPKKALPPEHLAKVTSMCXXXXXXXXXXXXXXXXXXXFTMPYHAGNNLSS 408
+T S *P ESP KK P EH +S MP HAG +L S
Sbjct: 470 TTRSR*PTESPAKKGFPLEHFPNASSSWPIAASVSPTFSALSSSVAAHMMPTHAGKSLLS 291
Query: 407 A*AAQKRAVARS*GSVGRIGRPANSSSTYCMMTSDSQMGLPL 282
A*AAQKRA ARS*GS GR+ P + ++ T S + L
Sbjct: 290 A*AAQKRAAARS*GSAGRMEVPVAAQTSSTYCTMASDSQMDL 165
Score = 63.4 bits (132), Expect(3) = 4e-034
Identities = 28/55 (50%), Positives = 33/55 (60%)
Frame = -2 / -2
Query: 295 WAYRCG*ARAPSCAPGWT*AGAHSCWICPPRRTRNSLLSCSAPSTRGARTGSPAG 131
W R G*A PSCAPGWT* GA P TR+ +S + P G+RTGSP+G
Sbjct: 172 WICRRG*APGPSCAPGWT*GGARPW*TGPAPCTRSPRVSYAVPCVHGSRTGSPSG 8
Score = 56.5 bits (117), Expect(3) = 8e-065
Identities = 23/46 (50%), Positives = 31/46 (67%)
Frame = +3 / +1
Query: 591 VLGSFLFWFEAVRRVFDLEIINASKTPLLAAWAERFVGTVEAKEVV 728
V+GS L WFE +R++F + +I A + P LAAW +RF T AK VV
Sbjct: 466 VVGSQLLWFEVLRKMFGVVVIEACRAPFLAAWVKRFWETDTAKAVV 603
Score = 50.6 bits (104), Expect(3) = 7e-039
Identities = 21/31 (67%), Positives = 24/31 (77%)
Frame = -3 / -3
Query: 444 HHAVPRWKQLVVGVGSPEASSGALVGVGWED 352
H A PR ++L VGVG PEAS GA+VGVG ED
Sbjct: 327 HDAHPRRQELAVGVGGPEASGGAVVGVGGED 235
Score = 46.9 bits (96), Expect(3) = 7e-039
Identities = 21/45 (46%), Positives = 26/45 (57%)
Frame = -2 / -1
Query: 730 GTTSFASTVPTNRSAHAANSGVLLALMISRSKTLRTASNQNKKEP 596
GTT+FA +V NR HAA G L A M + R+ SNQ+ EP
Sbjct: 605 GTTAFAVSVSQNRFTHAAKKGALQASMTTTPNIFRSTSNQSNCEP 471
Score = 45.5 bits (93), Expect(3) = 4e-034
Identities = 21/41 (51%), Positives = 24/41 (58%)
Frame = -1 / -3
Query: 728 HHLLRFYSPYKPLRPRSQQRSLASVNDLQVENPAHRLEPEQ 606
HH LR S KPL PR Q+ S A +ND E+ LEPEQ
Sbjct: 603 HHRLRRISLPKPLHPRGQEGSPAGLNDHDAEHLPQHLEPEQ 481
>gb|BQ762933.1|BQ762933 EBro02_SQ006_H16 _R root, 3 week, hydroponic grown, low nitrogen,
cv Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA
clone EBro02_SQ006_H16 5', mRNA sequence
Length = 701
Score = 120 bits (256), Expect(3) = 5e-064
Identities = 49/70 (70%), Positives = 60/70 (85%)
Frame = +1 / +1
Query: 133 LQVSPFVLRVCLALNMKGVSYEYVEEDISNKSELLLKSNPVHKKVPVLIHNGKPICESLV 312
++VSPFV+RV +AL MK V YEY+E+D+ K ELLLKSNPVH KVPVLIH+GK ICESL
Sbjct: 4 VRVSPFVIRVRMALQMKRVGYEYMEQDLFTKGELLLKSNPVHMKVPVLIHDGKSICESLA 183
Query: 313 IMQYVDELFA 342
I+QYVDE++A
Sbjct: 184 IVQYVDEVWA 213
Score = 104 bits (221), Expect(3) = 5e-064
Identities = 40/82 (48%), Positives = 48/82 (58%)
Frame = +1 / +1
Query: 343 GRPILPTDPYERATARFWAAYADDKLFPAWYGMVXXXXXXXXXXXXXXXXXXIEHMEVTF 522
G ILP DPY+RA ARFWAAYAD KL PAW G++ I +E F
Sbjct: 220 GTSILPADPYDRAAARFWAAYADSKLLPAWVGIMWAATEEERAEKVGDTLAAIGQLEEAF 399
Query: 523 AKCSGGNAFFGGDSIGYVDIVL 588
KCS G FF GDS+GY+D+V+
Sbjct: 400 GKCSNGKPFFAGDSVGYLDLVV 465
Score = 101 bits (216), Expect(3) = 3e-038
Identities = 45/71 (63%), Positives = 51/71 (71%)
Frame = -3 / -3
Query: 342 GEQLVDVLHDDE*LADGLTVVDEHGHLLVHRVGLEQELTLVGYVLLDVLVTHSFHVQRQA 163
G LVDVLHD + LADG VVDEH L VHRVGLE+EL L VLL VLV H+FH+Q A
Sbjct: 213 GPDLVDVLHDGQRLADGFAVVDEHRDLHVHRVGLEEELALGEQVLLHVLVAHAFHLQCHA 34
Query: 162 HAEHERAHLQA 130
+ +HERAH A
Sbjct: 33 YTDHERAHPDA 1
Score = 74.4 bits (156), Expect(3) = 7e-034
Identities = 40/102 (39%), Positives = 48/102 (47%)
Frame = -1 / -1
Query: 587 STMST*PMESPPKKALPPEHLAKVTSMCXXXXXXXXXXXXXXXXXXXFTMPYHAGNNLSS 408
+T S *P ESP KK P EH +S MP HAG +L S
Sbjct: 464 TTRSR*PTESPAKKGFPLEHFPNASSSWPIAASVSPTFSALSSSVAAHMMPTHAGKSLLS 285
Query: 407 A*AAQKRAVARS*GSVGRIGRPANSSSTYCMMTSDSQMGLPL 282
A*AAQKRA ARS*GS GR+ P + ++ T S + L
Sbjct: 284 A*AAQKRAAARS*GSAGRMEVPVAAQTSSTYCTMASDSQMDL 159
Score = 60.6 bits (126), Expect(3) = 7e-034
Identities = 27/53 (50%), Positives = 31/53 (58%)
Frame = -2 / -2
Query: 295 WAYRCG*ARAPSCAPGWT*AGAHSCWICPPRRTRNSLLSCSAPSTRGARTGSP 137
W R G*A PSCAPGWT* GA P TR+ +S + P G+RTGSP
Sbjct: 166 WICRRG*APGPSCAPGWT*GGARPW*TGPAPCTRSPRVSSAVPCVHGSRTGSP 8
Score = 59.7 bits (124), Expect(3) = 5e-064
Identities = 24/47 (51%), Positives = 32/47 (68%)
Frame = +3 / +1
Query: 591 VLGSFLFWFEAVRRVFDLEIINASKTPLLAAWAERFVGTVEAKEVVP 731
V+GS L WFE +R++F + +I A + P LAAW +RF T AK VVP
Sbjct: 460 VVGSQLLWFEVLRKMFGVVVIEACRAPFLAAWVKRFWETDTAKAVVP 600
Score = 50.6 bits (104), Expect(3) = 3e-038
Identities = 21/31 (67%), Positives = 24/31 (77%)
Frame = -3 / -3
Query: 444 HHAVPRWKQLVVGVGSPEASSGALVGVGWED 352
H A PR ++L VGVG PEAS GA+VGVG ED
Sbjct: 321 HDAHPRRQELAVGVGGPEASGGAVVGVGGED 229
Score = 48.7 bits (100), Expect(3) = 3e-038
Identities = 23/46 (50%), Positives = 26/46 (56%)
Frame = -1 / -3
Query: 743 RRGQRHHLLRFYSPYKPLRPRSQQRSLASVNDLQVENPAHRLEPEQ 606
R RHH LR S KPL PR Q+ S A +ND E+ LEPEQ
Sbjct: 612 RANVRHHRLRRISLPKPLHPRGQEGSPAGLNDHDAEHLPQHLEPEQ 475
Score = 47.3 bits (97), Expect(3) = 7e-034
Identities = 21/46 (45%), Positives = 27/46 (58%)
Frame = -2 / -1
Query: 733 NGTTSFASTVPTNRSAHAANSGVLLALMISRSKTLRTASNQNKKEP 596
+GTT+FA +V NR HAA G L A M + R+ SNQ+ EP
Sbjct: 602 SGTTAFAVSVSQNRFTHAAKKGALQASMTTTPNIFRSTSNQSNCEP 465
>gb|AL504140.1|AL504140 AL504140 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW04F05V 5', mRNA sequence
Length = 700
Score = 118 bits (253), Expect(3) = 2e-063
Identities = 46/77 (59%), Positives = 65/77 (84%)
Frame = +1 / +1
Query: 112 EGLKVLGLQVSPFVLRVCLALNMKGVSYEYVEEDISNKSELLLKSNPVHKKVPVLIHNGK 291
+ +K+LG +SPF +RV +AL+ KGVSYEY+E+D+ +K +LLL SNPVH KVPVLIH G+
Sbjct: 91 DDVKLLGSVMSPFAVRVRMALHAKGVSYEYLEQDLFHKGDLLLASNPVHNKVPVLIHAGR 270
Query: 292 PICESLVIMQYVDELFA 342
P+CESL I++YV+E++A
Sbjct: 271 PVCESLAIVEYVNEVWA 321
Score = 104 bits (222), Expect(3) = 2e-063
Identities = 41/85 (48%), Positives = 49/85 (57%)
Frame = +1 / +1
Query: 343 GRPILPTDPYERATARFWAAYADDKLFPAWYGMVXXXXXXXXXXXXXXXXXXIEHMEVTF 522
G +LP DPY RA ARFWAAY DDKLFPAW G++ I ME
Sbjct: 325 GASLLPADPYGRAVARFWAAYVDDKLFPAWLGILRAATEEDRAEKLDAALAVIGLMEDAL 504
Query: 523 AKCSGGNAFFGGDSIGYVDIVLTCS 597
A+CS G FF GDS+GY+D+ L C+
Sbjct: 505 AQCSDGKDFFAGDSVGYLDLALGCN 579
Score = 92.3 bits (195), Expect(3) = 3e-028
Identities = 43/73 (58%), Positives = 50/73 (68%)
Frame = -3 / -2
Query: 357 EDRPAGEQLVDVLHDDE*LADGLTVVDEHGHLLVHRVGLEQELTLVGYVLLDVLVTHSFH 178
E G LVDVL D + LADG VDEHG+L+VHRVG E+E+ LV VLL VLV +
Sbjct: 336 EGGAVGPDLVDVLDDGKRLADGPAGVDEHGNLVVHRVGGEEEVALVEQVLLQVLVADALG 157
Query: 177 VQRQAHAEHERAH 139
VQR AHA+ ERAH
Sbjct: 156 VQRHAHADRERAH 118
Score = 82.6 bits (174), Expect(4) = 4e-033
Identities = 40/89 (44%), Positives = 46/89 (51%)
Frame = -1 / -3
Query: 593 HVSTMST*PMESPPKKALPPEHLAKVTSMCXXXXXXXXXXXXXXXXXXXFTMPYHAGNNL 414
H S S P ESP KK+ P EH A+ +SM MP HAGN+L
Sbjct: 575 HPSARSRYPTESPAKKSFPSEHWARASSMSPITASAASSFSALSSSVAARRMPNHAGNSL 396
Query: 413 SSA*AAQKRAVARS*GSVGRIGRPANSSS 327
SS *AAQKRA AR *GS GR P+ +S
Sbjct: 395 SST*AAQKRATARP*GSAGRREAPSAQTS 309
Score = 58.8 bits (122), Expect(3) = 2e-063
Identities = 24/43 (55%), Positives = 31/43 (72%)
Frame = +3 / +1
Query: 594 LGSFLFWFEAVRRVFDLEIINASKTPLLAAWAERFVGTVEAKE 722
LG LFWF+A+R +F + +I+A +TP LAAWAERF T KE
Sbjct: 568 LGCNLFWFKALREMFGVTLIDAGRTPGLAAWAERFKQTEAGKE 696
Score = 56.1 bits (116), Expect(4) = 4e-033
Identities = 22/31 (70%), Positives = 23/31 (74%)
Frame = -1 / -3
Query: 341 ANSSSTYCMMTSDSQMGLPLWMSTGTFLCTG 249
A +S TY M SDSQ GLP WMSTGT LCTG
Sbjct: 320 AQTSLTYSTMASDSQTGLPAWMSTGTLLCTG 228
Score = 39.6 bits (80), Expect(3) = 3e-028
Identities = 17/27 (62%), Positives = 19/27 (70%)
Frame = -3 / -2
Query: 432 PRWKQLVVGVGSPEASSGALVGVGWED 352
PR +QLVV VG PEA A VGVG E+
Sbjct: 414 PRXEQLVVDVGGPEAGDSAAVGVGREE 334
Score = 35.9 bits (72), Expect(4) = 4e-033
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = -1 / -2
Query: 698 KPLRPRSQQRSLASVNDLQVENPAHRLEPEQEGAE 594
+PL P Q RS + V++ E+ A RLEPEQ E
Sbjct: 672 EPLSPGGQARSPSGVDERHAEHLAQRLEPEQVAPE 568
Score = 35.4 bits (71), Expect(3) = 3e-028
Identities = 19/42 (45%), Positives = 23/42 (54%)
Frame = -2 / -3
Query: 721 SFASTVPTNRSAHAANSGVLLALMISRSKTLRTASNQNKKEP 596
SF ++V N SA AA GVL A M R+A NQN+ P
Sbjct: 695 SFPASVCLNLSAQAARPGVLPASMSVTPNISRSALNQNRLHP 570
Score = 22.6 bits (43), Expect(4) = 4e-033
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -1 / -3
Query: 188 TPFMFSAKHTRSTNGL 141
TP SA TR+ NGL
Sbjct: 167 TPLACSAMRTRTANGL 120
>gb|BJ547778.1|BJ547778 BJ547778 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal39b17 5', mRNA sequence
Length = 653
Score = 131 bits (281), Expect(3) = 1e-061
Identities = 53/76 (69%), Positives = 65/76 (85%)
Frame = +1 / +2
Query: 118 LKVLGLQVSPFVLRVCLALNMKGVSYEYVEEDISNKSELLLKSNPVHKKVPVLIHNGKPI 297
LK+LG PF LRV LALN KG+SYEY EED++NKS+LLL+SNPV+KKVPVLIHNG PI
Sbjct: 47 LKLLGTWRGPFALRVRLALNFKGLSYEYQEEDLANKSDLLLESNPVNKKVPVLIHNGVPI 226
Query: 298 CESLVIMQYVDELFAG 345
CESL I++Y+DE++ G
Sbjct: 227 CESLAILEYIDEVYRG 274
Score = 92.3 bits (195), Expect(3) = 1e-061
Identities = 35/82 (42%), Positives = 45/82 (54%)
Frame = +1 / +2
Query: 343 GRPILPTDPYERATARFWAAYADDKLFPAWYGMVXXXXXXXXXXXXXXXXXXIEHMEVTF 522
G +LP DPY+RA ARFWAAY D L W+ M +E +EV
Sbjct: 278 GPCLLPGDPYQRAVARFWAAYIDQNLVAPWWKMFVGKTDKEKHEGTKQTLAAVEKLEVAL 457
Query: 523 AKCSGGNAFFGGDSIGYVDIVL 588
+CS G FFGGD++GY+D+VL
Sbjct: 458 RECSSGKPFFGGDNVGYIDVVL 523
Score = 83.5 bits (176), Expect(3) = 3e-022
Identities = 41/82 (50%), Positives = 55/82 (67%)
Frame = -3 / -2
Query: 333 LVDVLHDDE*LADGLTVVDEHGHLLVHRVGLEQELTLVGYVLLDVLVTHSFHVQRQAHAE 154
LVDVL D E*LA+ +VDE+GHLLVHR+GL +++TLVG VL VLV +F V+R H++
Sbjct: 262 LVDVLQDGE*LANWHAIVDENGHLLVHRIGL*KKVTLVGKVLFLVLVAQAFEVER*PHSQ 83
Query: 153 HERAHLQAEDLKTLLARHCFPL 88
ER ++L +L PL
Sbjct: 82 RERPPPCPQEL*LVLVFPXLPL 17
Score = 51.9 bits (107), Expect(3) = 1e-061
Identities = 21/45 (46%), Positives = 28/45 (62%)
Frame = +3 / +2
Query: 591 VLGSFLFWFEAVRRVFDLEIINASKTPLLAAWAERFVGTVEAKEV 725
VLG + W + + LE+++A+KTPLL AW ERF G AK V
Sbjct: 518 VLGGMVAWMQGTEALCGLELLDATKTPLLLAWMERFGGMEPAKAV 652
Score = 33.6 bits (67), Expect(3) = 3e-022
Identities = 13/31 (41%), Positives = 22/31 (70%)
Frame = -2 / -3
Query: 724 TSFASTVPTNRSAHAANSGVLLALMISRSKT 632
T+ A ++P RS HA+++GVL+A SR ++
Sbjct: 651 TALAGSIPPKRSIHASSNGVLVASRSSRPQS 559
Score = 29.5 bits (58), Expect(3) = 3e-022
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -3 / -2
Query: 441 HAVPRWKQLVVGVGSPEASSGALVGVGWE 355
H P +++ VG PE S G LVGV E
Sbjct: 376 HLPPWRD*ILINVGGPEPSDGTLVGVARE 290
>gb|AL503324.1|AL503324 AL503324 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW01K08T 5', mRNA sequence
Length = 700
Score = 153 bits (329), Expect(4) = 8e-061
Identities = 61/87 (70%), Positives = 76/87 (87%)
Frame = +1 / +2
Query: 85 LERETMAGKEGLKVLGLQVSPFVLRVCLALNMKGVSYEYVEEDISNKSELLLKSNPVHKK 264
+++ETMAG E LK+LG SPFV RV LAL++KG+S+E VEED+ NKSELLL SNPVHKK
Sbjct: 29 IKQETMAGGEDLKLLGAWASPFVTRVKLALSLKGLSFEDVEEDLGNKSELLLSSNPVHKK 208
Query: 265 VPVLIHNGKPICESLVIMQYVDELFAG 345
VPVL+HNGKP+CES++I+QY+DE FAG
Sbjct: 209 VPVLVHNGKPVCESVIILQYIDEAFAG 289
Score = 92.7 bits (196), Expect(3) = 1e-026
Identities = 42/82 (51%), Positives = 54/82 (65%)
Frame = -3 / -1
Query: 345 AGEQLVDVLHDDE*LADGLTVVDEHGHLLVHRVGLEQELTLVGYVLLDVLVTHSFHVQRQ 166
AGE+L+DVL DD *LA GL++V+EH HLLVH V E+EL LV VLLD+L + QR+
Sbjct: 289 AGERLIDVLKDDH*LAHGLSIVNEHWHLLVHWVRAEEELALVAQVLLDILEAQALEAQRK 110
Query: 165 AHAEHERAHLQAEDLKTLLARH 100
H +RA AE L+ + H
Sbjct: 109 LHPGDKRACPSAEQLQVFSSGH 44
Score = 56.5 bits (117), Expect(4) = 8e-061
Identities = 20/30 (66%), Positives = 23/30 (76%)
Frame = +1 / +2
Query: 343 GRPILPTDPYERATARFWAAYADDKLFPAW 432
G +LP+DPY+RA ARFWAAY DDKL W
Sbjct: 293 GPSLLPSDPYQRAVARFWAAYIDDKLVAPW 382
Score = 44.6 bits (91), Expect(4) = 8e-061
Identities = 20/46 (43%), Positives = 25/46 (54%)
Frame = +3 / +2
Query: 594 LGSFLFWFEAVRRVFDLEIINASKTPLLAAWAERFVGTVEAKEVVP 731
LGS L W A + +I + KTPLLAAW +RF AK +P
Sbjct: 536 LGSLLSWLNATEVMSGTKIFDPVKTPLLAAWMDRFSELDAAKAALP 673
Score = 37.3 bits (75), Expect(3) = 1e-026
Identities = 19/36 (52%), Positives = 24/36 (66%)
Frame = -1 / -2
Query: 431 HAGNNLSSA*AAQKRAVARS*GSVGRIGRPANSSST 324
H +LSS *AAQKRA AR *GS GR P ++++
Sbjct: 381 HGATSLSSM*AAQKRATARW*GSEGRREGPMPANAS 274
Score = 36.8 bits (74), Expect(4) = 8e-061
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +1 / +2
Query: 499 IEHMEVTFAKCSGGNAFFGGDSIGYVDIVL 588
+E +E +CS G +FGG+++G VD+ L
Sbjct: 449 VEMLEGALRECSKGEGYFGGETVGLVDVSL 538
Score = 32.2 bits (64), Expect(3) = 1e-026
Identities = 17/46 (36%), Positives = 21/46 (45%)
Frame = -2 / -2
Query: 733 NGTTSFASTVPTNRSAHAANSGVLLALMISRSKTLRTASNQNKKEP 596
+G + A++ RS HAA SGVL I A NQ K P
Sbjct: 675 SGNAALAASSSLKRSIHAAKSGVLTGSKILVPDITSVAFNQESKLP 538
>gb|AV933203.1|AV933203 AV933203 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal5m21 5', mRNA sequence
Length = 640
Score = 131 bits (281), Expect(3) = 2e-060
Identities = 53/76 (69%), Positives = 65/76 (85%)
Frame = +1 / +1
Query: 118 LKVLGLQVSPFVLRVCLALNMKGVSYEYVEEDISNKSELLLKSNPVHKKVPVLIHNGKPI 297
LK+LG PF LRV LALN KG+SYEY EED++NKS+LLL+SNPV+KKVPVLIHNG PI
Sbjct: 49 LKLLGTWRGPFALRVRLALNFKGLSYEYQEEDLANKSDLLLESNPVNKKVPVLIHNGVPI 228
Query: 298 CESLVIMQYVDELFAG 345
CESL I++Y+DE++ G
Sbjct: 229 CESLAILEYIDEVYRG 276
Score = 92.3 bits (195), Expect(3) = 2e-060
Identities = 35/82 (42%), Positives = 45/82 (54%)
Frame = +1 / +1
Query: 343 GRPILPTDPYERATARFWAAYADDKLFPAWYGMVXXXXXXXXXXXXXXXXXXIEHMEVTF 522
G +LP DPY+RA ARFWAAY D L W+ M +E +EV
Sbjct: 280 GPCLLPGDPYQRAVARFWAAYIDQNLVAPWWKMFVGKTDKEKHEGTKQTLAAVEKLEVAL 459
Query: 523 AKCSGGNAFFGGDSIGYVDIVL 588
+CS G FFGGD++GY+D+VL
Sbjct: 460 RECSSGKPFFGGDNVGYIDVVL 525
Score = 48.3 bits (99), Expect(3) = 2e-060
Identities = 18/38 (47%), Positives = 25/38 (65%)
Frame = +3 / +1
Query: 591 VLGSFLFWFEAVRRVFDLEIINASKTPLLAAWAERFVG 704
VLG + W + + LE+++A+KTPLL AW ERF G
Sbjct: 520 VLGGMVAWMQGTEALCGLELLDATKTPLLLAWMERFGG 633
>gb|BJ547635.1|BJ547635 BJ547635 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal33l15 5', mRNA sequence
Length = 642
Score = 131 bits (281), Expect(3) = 2e-060
Identities = 53/76 (69%), Positives = 65/76 (85%)
Frame = +1 / +2
Query: 118 LKVLGLQVSPFVLRVCLALNMKGVSYEYVEEDISNKSELLLKSNPVHKKVPVLIHNGKPI 297
LK+LG PF LRV LALN KG+SYEY EED++NKS+LLL+SNPV+KKVPVLIHNG PI
Sbjct: 47 LKLLGTWRGPFALRVRLALNFKGLSYEYQEEDLANKSDLLLESNPVNKKVPVLIHNGVPI 226
Query: 298 CESLVIMQYVDELFAG 345
CESL I++Y+DE++ G
Sbjct: 227 CESLAILEYIDEVYRG 274
Score = 92.3 bits (195), Expect(3) = 2e-060
Identities = 35/82 (42%), Positives = 45/82 (54%)
Frame = +1 / +2
Query: 343 GRPILPTDPYERATARFWAAYADDKLFPAWYGMVXXXXXXXXXXXXXXXXXXIEHMEVTF 522
G +LP DPY+RA ARFWAAY D L W+ M +E +EV
Sbjct: 278 GPCLLPGDPYQRAVARFWAAYIDQNLVAPWWKMFVGKTDKEKHEGTKQTLAAVEKLEVAL 457
Query: 523 AKCSGGNAFFGGDSIGYVDIVL 588
+CS G FFGGD++GY+D+VL
Sbjct: 458 RECSSGKPFFGGDNVGYIDVVL 523
Score = 83.5 bits (176), Expect(3) = 2e-021
Identities = 41/82 (50%), Positives = 55/82 (67%)
Frame = -3 / -3
Query: 333 LVDVLHDDE*LADGLTVVDEHGHLLVHRVGLEQELTLVGYVLLDVLVTHSFHVQRQAHAE 154
LVDVL D E*LA+ +VDE+GHLLVHR+GL +++TLVG VL VLV +F V+R H++
Sbjct: 262 LVDVLQDGE*LANWHAIVDENGHLLVHRIGL*KKVTLVGKVLFLVLVAQAFEVER*PHSQ 83
Query: 153 HERAHLQAEDLKTLLARHCFPL 88
ER ++L +L PL
Sbjct: 82 RERPPPCPQEL*LVLVFPXLPL 17
Score = 48.3 bits (99), Expect(3) = 2e-060
Identities = 18/38 (47%), Positives = 25/38 (65%)
Frame = +3 / +2
Query: 591 VLGSFLFWFEAVRRVFDLEIINASKTPLLAAWAERFVG 704
VLG + W + + LE+++A+KTPLL AW ERF G
Sbjct: 518 VLGGMVAWMQGTEALCGLELLDATKTPLLLAWMERFGG 631
Score = 30.9 bits (61), Expect(3) = 2e-021
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = -2 / -1
Query: 715 ASTVPTNRSAHAANSGVLLALMISRSKT 632
A ++P RS HA+++GVL+A SR ++
Sbjct: 642 AGSIPPKRSIHASSNGVLVASRSSRPQS 559
Score = 29.5 bits (58), Expect(3) = 2e-021
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -3 / -3
Query: 441 HAVPRWKQLVVGVGSPEASSGALVGVGWE 355
H P +++ VG PE S G LVGV E
Sbjct: 376 HLPPWRD*ILINVGGPEPSDGTLVGVARE 290
>gb|BF622215.3|BF622215 HVSMEa0002A20f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0002A20f, mRNA sequence
Length = 846
Score = 153 bits (329), Expect(4) = 5e-060
Identities = 61/87 (70%), Positives = 76/87 (87%)
Frame = +1 / +1
Query: 85 LERETMAGKEGLKVLGLQVSPFVLRVCLALNMKGVSYEYVEEDISNKSELLLKSNPVHKK 264
+++ETMAG E LK+LG SPFV RV LAL++KG+S+E VEED+ NKSELLL SNPVHKK
Sbjct: 49 IKQETMAGGEDLKLLGAWASPFVTRVKLALSLKGLSFEDVEEDLGNKSELLLSSNPVHKK 228
Query: 265 VPVLIHNGKPICESLVIMQYVDELFAG 345
VPVL+HNGKP+CES++I+QY+DE FAG
Sbjct: 229 VPVLVHNGKPVCESVIILQYIDEAFAG 309
Score = 92.7 bits (196), Expect(3) = 2e-025
Identities = 42/82 (51%), Positives = 54/82 (65%)
Frame = -3 / -1
Query: 345 AGEQLVDVLHDDE*LADGLTVVDEHGHLLVHRVGLEQELTLVGYVLLDVLVTHSFHVQRQ 166
AGE+L+DVL DD *LA GL++V+EH HLLVH V E+EL LV VLLD+L + QR+
Sbjct: 309 AGERLIDVLKDDH*LAHGLSIVNEHWHLLVHWVRAEEELALVAQVLLDILEAQALEAQRK 130
Query: 165 AHAEHERAHLQAEDLKTLLARH 100
H +RA AE L+ + H
Sbjct: 129 LHPGDKRACPSAEQLQVFSSGH 64
Score = 56.5 bits (117), Expect(4) = 5e-060
Identities = 20/30 (66%), Positives = 23/30 (76%)
Frame = +1 / +1
Query: 343 GRPILPTDPYERATARFWAAYADDKLFPAW 432
G +LP+DPY+RA ARFWAAY DDKL W
Sbjct: 313 GPSLLPSDPYQRAVARFWAAYIDDKLVAPW 402
Score = 41.8 bits (85), Expect(4) = 5e-060
Identities = 19/42 (45%), Positives = 23/42 (54%)
Frame = +3 / +1
Query: 594 LGSFLFWFEAVRRVFDLEIINASKTPLLAAWAERFVGTVEAK 719
LGS L W A + +I + KTPLLAAW +RF AK
Sbjct: 556 LGSLLSWLNATEVMSGTKIFDPVKTPLLAAWMDRFYQLDAAK 681
Score = 37.3 bits (75), Expect(3) = 2e-025
Identities = 19/36 (52%), Positives = 24/36 (66%)
Frame = -1 / -2
Query: 431 HAGNNLSSA*AAQKRAVARS*GSVGRIGRPANSSST 324
H +LSS *AAQKRA AR *GS GR P ++++
Sbjct: 401 HGATSLSSM*AAQKRATARW*GSEGRREGPMPANAS 294
Score = 36.8 bits (74), Expect(4) = 5e-060
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +1 / +1
Query: 499 IEHMEVTFAKCSGGNAFFGGDSIGYVDIVL 588
+E +E +CS G +FGG+++G VD+ L
Sbjct: 469 VEMLEGALRECSKGEGYFGGETVGLVDVSL 558
Score = 28.1 bits (55), Expect(3) = 2e-025
Identities = 17/44 (38%), Positives = 20/44 (45%)
Frame = -2 / -2
Query: 727 TTSFASTVPTNRSAHAANSGVLLALMISRSKTLRTASNQNKKEP 596
T + A++ RS HAA SGVL I A NQ K P
Sbjct: 689 TPALAASSW*KRSIHAAKSGVLTGSKILVPDITSVAFNQESKLP 558
>gb|BF621550.2|BF621550 HVSMEa0011F24f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0011F24f, mRNA sequence
Length = 808
Score = 153 bits (329), Expect(4) = 7e-060
Identities = 61/87 (70%), Positives = 76/87 (87%)
Frame = +1 / +2
Query: 85 LERETMAGKEGLKVLGLQVSPFVLRVCLALNMKGVSYEYVEEDISNKSELLLKSNPVHKK 264
+++ETMAG E LK+LG SPFV RV LAL++KG+S+E VEED+ NKSELLL SNPVHKK
Sbjct: 47 IKQETMAGGEDLKLLGAWASPFVTRVKLALSLKGLSFEDVEEDLGNKSELLLSSNPVHKK 226
Query: 265 VPVLIHNGKPICESLVIMQYVDELFAG 345
VPVL+HNGKP+CES++I+QY+DE FAG
Sbjct: 227 VPVLVHNGKPVCESVIILQYIDEAFAG 307
Score = 92.7 bits (196), Expect(3) = 1e-026
Identities = 42/82 (51%), Positives = 54/82 (65%)
Frame = -3 / -1
Query: 345 AGEQLVDVLHDDE*LADGLTVVDEHGHLLVHRVGLEQELTLVGYVLLDVLVTHSFHVQRQ 166
AGE+L+DVL DD *LA GL++V+EH HLLVH V E+EL LV VLLD+L + QR+
Sbjct: 307 AGERLIDVLKDDH*LAHGLSIVNEHWHLLVHWVRAEEELALVAQVLLDILEAQALEAQRK 128
Query: 165 AHAEHERAHLQAEDLKTLLARH 100
H +RA AE L+ + H
Sbjct: 127 LHPGDKRACPSAEQLQVFSSGH 62
Score = 56.5 bits (117), Expect(4) = 7e-060
Identities = 20/30 (66%), Positives = 23/30 (76%)
Frame = +1 / +2
Query: 343 GRPILPTDPYERATARFWAAYADDKLFPAW 432
G +LP+DPY+RA ARFWAAY DDKL W
Sbjct: 311 GPSLLPSDPYQRAVARFWAAYIDDKLVAPW 400
Score = 41.4 bits (84), Expect(4) = 7e-060
Identities = 19/46 (41%), Positives = 24/46 (52%)
Frame = +3 / +2
Query: 594 LGSFLFWFEAVRRVFDLEIINASKTPLLAAWAERFVGTVEAKEVVP 731
LGS L W A + +I + KTPLLAAW +R AK +P
Sbjct: 554 LGSLLSWLNATEVMSGTKIFDPVKTPLLAAWMDRXSELDAAKAALP 691
Score = 37.3 bits (75), Expect(3) = 1e-026
Identities = 19/36 (52%), Positives = 24/36 (66%)
Frame = -1 / -2
Query: 431 HAGNNLSSA*AAQKRAVARS*GSVGRIGRPANSSST 324
H +LSS *AAQKRA AR *GS GR P ++++
Sbjct: 399 HGATSLSSM*AAQKRATARW*GSEGRREGPMPANAS 292
Score = 36.8 bits (74), Expect(4) = 7e-060
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +1 / +2
Query: 499 IEHMEVTFAKCSGGNAFFGGDSIGYVDIVL 588
+E +E +CS G +FGG+++G VD+ L
Sbjct: 467 VEMLEGALRECSKGEGYFGGETVGLVDVSL 556
Score = 32.2 bits (64), Expect(3) = 1e-026
Identities = 18/57 (31%), Positives = 25/57 (43%)
Frame = -2 / -2
Query: 766 LMYCTAMSAVGNGTTSFASTVPTNRSAHAANSGVLLALMISRSKTLRTASNQNKKEP 596
L+ + + +G + A++ RS HAA SGVL I A NQ K P
Sbjct: 726 LLMANSTTLSTSGNAALAASSSLXRSIHAAKSGVLTGSKILVPDITSVAFNQESKLP 556
>gb|BF622224.2|BF622224 HVSMEa0002C05f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0002C05f, mRNA sequence
Length = 705
Score = 153 bits (329), Expect(4) = 3e-059
Identities = 61/87 (70%), Positives = 76/87 (87%)
Frame = +1 / +1
Query: 85 LERETMAGKEGLKVLGLQVSPFVLRVCLALNMKGVSYEYVEEDISNKSELLLKSNPVHKK 264
+++ETMAG E LK+LG SPFV RV LAL++KG+S+E VEED+ NKSELLL SNPVHKK
Sbjct: 46 IKQETMAGGEDLKLLGAWASPFVTRVKLALSLKGLSFEDVEEDLGNKSELLLSSNPVHKK 225
Query: 265 VPVLIHNGKPICESLVIMQYVDELFAG 345
VPVL+HNGKP+CES++I+QY+DE FAG
Sbjct: 226 VPVLVHNGKPVCESVIILQYIDEAFAG 306
Score = 92.7 bits (196), Expect(2) = 1e-023
Identities = 42/82 (51%), Positives = 54/82 (65%)
Frame = -3 / -1
Query: 345 AGEQLVDVLHDDE*LADGLTVVDEHGHLLVHRVGLEQELTLVGYVLLDVLVTHSFHVQRQ 166
AGE+L+DVL DD *LA GL++V+EH HLLVH V E+EL LV VLLD+L + QR+
Sbjct: 306 AGERLIDVLKDDH*LAHGLSIVNEHWHLLVHWVRAEEELALVAQVLLDILEAQALEAQRK 127
Query: 165 AHAEHERAHLQAEDLKTLLARH 100
H +RA AE L+ + H
Sbjct: 126 LHPGDKRACPSAEQLQVFSSGH 61
Score = 56.5 bits (117), Expect(4) = 3e-059
Identities = 20/30 (66%), Positives = 23/30 (76%)
Frame = +1 / +1
Query: 343 GRPILPTDPYERATARFWAAYADDKLFPAW 432
G +LP+DPY+RA ARFWAAY DDKL W
Sbjct: 310 GPSLLPSDPYQRAVARFWAAYIDDKLVAPW 399
Score = 39.1 bits (79), Expect(4) = 3e-059
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = +3 / +1
Query: 594 LGSFLFWFEAVRRVFDLEIINASKTPLLAAWAERF 698
LGS L W A + +I + KTPLL AW +RF
Sbjct: 553 LGSLLSWLNATEVMSGTKIFDPVKTPLLPAWMDRF 657
Score = 37.3 bits (75), Expect(2) = 1e-023
Identities = 19/36 (52%), Positives = 24/36 (66%)
Frame = -1 / -2
Query: 431 HAGNNLSSA*AAQKRAVARS*GSVGRIGRPANSSST 324
H +LSS *AAQKRA AR *GS GR P ++++
Sbjct: 398 HGATSLSSM*AAQKRATARW*GSEGRREGPMPANAS 291
Score = 36.8 bits (74), Expect(4) = 3e-059
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +1 / +1
Query: 499 IEHMEVTFAKCSGGNAFFGGDSIGYVDIVL 588
+E +E +CS G +FGG+++G VD+ L
Sbjct: 466 VEMLEGALRECSKGEGYFGGETVGLVDVSL 555
>gb|CA011829.1|CA011829 HT03K17r HT Hordeum vulgare subsp. vulgare cDNA clone HT03K17
5-PRIME, mRNA sequence
Length = 558
Score = 115 bits (246), Expect(3) = 1e-058
Identities = 47/66 (71%), Positives = 56/66 (84%)
Frame = +1 / +3
Query: 145 PFVLRVCLALNMKGVSYEYVEEDISNKSELLLKSNPVHKKVPVLIHNGKPICESLVIMQY 324
PFV+RV +AL MK V YEY+E+D+ K ELLLKSNPVH KVPVLIH+GK ICESL I+QY
Sbjct: 12 PFVIRVRMALQMKRVGYEYMEQDLFTKGELLLKSNPVHMKVPVLIHDGKSICESLAIVQY 191
Query: 325 VDELFA 342
VDE++A
Sbjct: 192 VDEVWA 209
Score = 104 bits (221), Expect(3) = 1e-058
Identities = 40/82 (48%), Positives = 48/82 (58%)
Frame = +1 / +3
Query: 343 GRPILPTDPYERATARFWAAYADDKLFPAWYGMVXXXXXXXXXXXXXXXXXXIEHMEVTF 522
G ILP DPY+RA ARFWAAYAD KL PAW G++ I +E F
Sbjct: 216 GTSILPADPYDRAAARFWAAYADSKLLPAWVGIMWAATEEERAEKVGDTLAAIGQLEEAF 395
Query: 523 AKCSGGNAFFGGDSIGYVDIVL 588
KCS G FF GDS+GY+D+V+
Sbjct: 396 GKCSNGKPFFAGDSVGYLDLVV 461
Score = 97.7 bits (207), Expect(3) = 2e-032
Identities = 43/67 (64%), Positives = 49/67 (73%)
Frame = -3 / -2
Query: 342 GEQLVDVLHDDE*LADGLTVVDEHGHLLVHRVGLEQELTLVGYVLLDVLVTHSFHVQRQA 163
G LVDVLHD + LADG VVDEH L VHRVGLE+EL L VLL VLV H+FH+Q A
Sbjct: 209 GPDLVDVLHDGQRLADGFAVVDEHRDLHVHRVGLEEELALGEQVLLHVLVAHAFHLQCHA 30
Query: 162 HAEHERA 142
+ +HERA
Sbjct: 29 YTDHERA 9
Score = 74.4 bits (156), Expect(3) = 3e-027
Identities = 40/102 (39%), Positives = 48/102 (47%)
Frame = -1 / -3
Query: 587 STMST*PMESPPKKALPPEHLAKVTSMCXXXXXXXXXXXXXXXXXXXFTMPYHAGNNLSS 408
+T S *P ESP KK P EH +S MP HAG +L S
Sbjct: 460 TTRSR*PTESPAKKGFPLEHFPNASSSWPIAASVSPTFSALSSSVAAHMMPTHAGKSLLS 281
Query: 407 A*AAQKRAVARS*GSVGRIGRPANSSSTYCMMTSDSQMGLPL 282
A*AAQKRA ARS*GS GR+ P + ++ T S + L
Sbjct: 280 A*AAQKRAAARS*GSAGRMEVPVAAQTSSTYCTMASDSQMDL 155
Score = 55.6 bits (115), Expect(3) = 3e-027
Identities = 25/51 (49%), Positives = 29/51 (56%)
Frame = -2 / -1
Query: 295 WAYRCG*ARAPSCAPGWT*AGAHSCWICPPRRTRNSLLSCSAPSTRGARTG 143
W R G*A PSCAPGWT* GA P TR+ +S + P G+RTG
Sbjct: 162 WICRRG*APGPSCAPGWT*GGARPW*TGPAPCTRSPRVSSAVPCVHGSRTG 10
Score = 50.6 bits (104), Expect(3) = 2e-032
Identities = 21/31 (67%), Positives = 24/31 (77%)
Frame = -3 / -2
Query: 444 HHAVPRWKQLVVGVGSPEASSGALVGVGWED 352
H A PR ++L VGVG PEAS GA+VGVG ED
Sbjct: 317 HDAHPRRQELAVGVGGPEASGGAVVGVGGED 225
Score = 46.0 bits (94), Expect(3) = 1e-058
Identities = 16/34 (47%), Positives = 24/34 (70%)
Frame = +3 / +3
Query: 591 VLGSFLFWFEAVRRVFDLEIINASKTPLLAAWAE 692
V+GS L WFE +R++F + +I A + P LAAW +
Sbjct: 456 VVGSQLLWFEVLRKMFGVVVIEACRAPFLAAWVK 557
Score = 32.2 bits (64), Expect(3) = 2e-032
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = -1 / -2
Query: 692 LRPRSQQRSLASVNDLQVENPAHRLEPEQ 606
L PR Q+ S A +ND E+ LEPEQ
Sbjct: 557 LHPRGQEGSPAGLNDHDAEHLPQHLEPEQ 471
Score = 29.9 bits (59), Expect(3) = 3e-027
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = -2 / -3
Query: 685 HAANSGVLLALMISRSKTLRTASNQNKKEP 596
HAA G L A M + R+ SNQ+ EP
Sbjct: 550 HAAKKGALQASMTTTPNIFRSTSNQSNCEP 461
>gb|BE214950.1|BE214950 HV_CEb0005F03f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0005F03f, mRNA sequence
Length = 946
Score = 129 bits (277), Expect(3) = 5e-058
Identities = 54/75 (72%), Positives = 64/75 (85%)
Frame = +1 / +3
Query: 118 LKVLGLQVSPFVLRVCLALNMKGVSYEYVEEDISNKSELLLKSNPVHKKVPVLIHNGKPI 297
LK+LGL VSPFV+RV +AL MK V YEY+E+D+ K ELLLKSNPVH KVPVLIH+GK I
Sbjct: 24 LKLLGLTVSPFVIRVRMALQMKRVGYEYMEQDLFTKGELLLKSNPVHMKVPVLIHDGKSI 203
Query: 298 CESLVIMQYVDELFA 342
CESL I+QYVDE++A
Sbjct: 204 CESLAIVQYVDEVWA 248
Score = 110 bits (234), Expect(3) = 7e-036
Identities = 48/76 (63%), Positives = 56/76 (73%)
Frame = -3 / -3
Query: 342 GEQLVDVLHDDE*LADGLTVVDEHGHLLVHRVGLEQELTLVGYVLLDVLVTHSFHVQRQA 163
G LVDVLHD + LADG VVDEH L VHRVGLE+EL L VLL VLV H+FH+Q A
Sbjct: 248 GPDLVDVLHDGQRLADGFAVVDEHRDLHVHRVGLEEELALGEQVLLHVLVAHAFHLQCHA 69
Query: 162 HAEHERAHLQAEDLKT 115
+ +HERAH QA+ L+T
Sbjct: 68 YTDHERAHRQAQQLQT 21
Score = 100 bits (213), Expect(3) = 5e-058
Identities = 39/82 (47%), Positives = 47/82 (57%)
Frame = +1 / +3
Query: 343 GRPILPTDPYERATARFWAAYADDKLFPAWYGMVXXXXXXXXXXXXXXXXXXIEHMEVTF 522
G ILP DPY+RA ARFWAAYAD KL PAW G++ I +E F
Sbjct: 255 GTSILPADPYDRAAARFWAAYADSKLLPAWVGIMWAATEEERAENVGDTLAAIGQLEEAF 434
Query: 523 AKCSGGNAFFGGDSIGYVDIVL 588
KCS G FF GDS+ Y+D+V+
Sbjct: 435 GKCSNGKPFFAGDSVRYLDLVV 500
Score = 70.7 bits (148), Expect(2) = 5e-025
Identities = 39/103 (37%), Positives = 48/103 (46%)
Frame = -1 / -1
Query: 590 VSTMST*PMESPPKKALPPEHLAKVTSMCXXXXXXXXXXXXXXXXXXXFTMPYHAGNNLS 411
++T S * ESP KK P EH +S MP HAG +L
Sbjct: 502 LTTRSR*RTESPAKKGFPLEHFPNASSSWPIAASVSPTFSALSSSVAAHMMPTHAGKSLL 323
Query: 410 SA*AAQKRAVARS*GSVGRIGRPANSSSTYCMMTSDSQMGLPL 282
SA*AAQKRA ARS*GS GR+ P + ++ T S + L
Sbjct: 322 SA*AAQKRAAARS*GSAGRMEVPVAAQTSSTYCTMASDSQMDL 194
Score = 63.8 bits (133), Expect(2) = 5e-025
Identities = 28/55 (50%), Positives = 33/55 (60%)
Frame = -2 / -2
Query: 295 WAYRCG*ARAPSCAPGWT*AGAHSCWICPPRRTRNSLLSCSAPSTRGARTGSPAG 131
W R G*A PSCAPGWT* GA P TR+ +S + P G+RTGSP+G
Sbjct: 201 WICRRG*APGPSCAPGWT*GGARPW*TGPAPCTRSPRVSSAVPCVHGSRTGSPSG 37
Score = 50.6 bits (104), Expect(3) = 7e-036
Identities = 21/31 (67%), Positives = 24/31 (77%)
Frame = -3 / -3
Query: 444 HHAVPRWKQLVVGVGSPEASSGALVGVGWED 352
H A PR ++L VGVG PEAS GA+VGVG ED
Sbjct: 356 HDAHPRRQELAVGVGGPEASGGAVVGVGGED 264
Score = 33.6 bits (67), Expect(3) = 5e-058
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +3 / +3
Query: 591 VLGSFLFWFEAVRRVFDLEIINASKTPLLAAWAERFVG 704
V+ S L W +R++ + +I A K AAW +R +G
Sbjct: 495 VVRSQLLWLXVLRKMLRVGVIEACKAXFXAAWVKRVLG 608
Score = 33.6 bits (67), Expect(3) = 7e-036
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = -1 / -3
Query: 695 PLRPRSQQRSLASVNDLQVENPAHRLEPEQ 606
PL PR + SLA +ND E+ EPEQ
Sbjct: 599 PLHPRGXEGSLAGLNDPDAEHLPQHXEPEQ 510
>gb|BJ548902.1|BJ548902 BJ548902 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal39b17 3', mRNA sequence
Length = 736
Score = 114 bits (244), Expect(3) = 1e-057
Identities = 44/60 (73%), Positives = 55/60 (91%)
Frame = +1 / -1
Query: 166 LALNMKGVSYEYVEEDISNKSELLLKSNPVHKKVPVLIHNGKPICESLVIMQYVDELFAG 345
LALN KG+SYEY EED++NKS+LLL+SNPV+KKVPVLIHNG PICESL I++Y+DE++ G
Sbjct: 736 LALNFKGLSYEYQEEDLANKSDLLLESNPVNKKVPVLIHNGVPICESLAILEYIDEVYRG 557
Score = 92.3 bits (195), Expect(3) = 1e-057
Identities = 35/82 (42%), Positives = 45/82 (54%)
Frame = +1 / -1
Query: 343 GRPILPTDPYERATARFWAAYADDKLFPAWYGMVXXXXXXXXXXXXXXXXXXIEHMEVTF 522
G +LP DPY+RA ARFWAAY D L W+ M +E +EV
Sbjct: 553 GPCLLPGDPYQRAVARFWAAYIDQNLVAPWWKMFVGKTDKEKHEGTKQTLAAVEKLEVAL 374
Query: 523 AKCSGGNAFFGGDSIGYVDIVL 588
+CS G FFGGD++GY+D+VL
Sbjct: 373 RECSSGKPFFGGDNVGYIDVVL 308
Score = 55.6 bits (115), Expect(3) = 1e-057
Identities = 22/47 (46%), Positives = 30/47 (63%)
Frame = +3 / -1
Query: 591 VLGSFLFWFEAVRRVFDLEIINASKTPLLAAWAERFVGTVEAKEVVP 731
VLG + W + + LE+++A+KTPLL AW ERF G AK V+P
Sbjct: 313 VLGGMVAWMQGTEALCGLELLDATKTPLLLAWMERFGGMEPAKAVLP 173
>gb|BG368894.1|BG368894 HVSMEi0021D06f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0021D06f, mRNA sequence
Length = 793
Score = 139 bits (299), Expect(4) = 2e-057
Identities = 58/83 (69%), Positives = 69/83 (83%)
Frame = +1 / +2
Query: 94 ETMAGKEGLKVLGLQVSPFVLRVCLALNMKGVSYEYVEEDISNKSELLLKSNPVHKKVPV 273
E MAG LK+LGL VSPFV RV LAL+MKGV YEY+E D+ +K ELLL+ NPVHKKVPV
Sbjct: 8 EAMAGDGDLKLLGLMVSPFVTRVRLALHMKGVGYEYIETDVLDKGELLLRYNPVHKKVPV 187
Query: 274 LIHNGKPICESLVIMQYVDELFA 342
LIHNG P+CES VI+QYVDE+++
Sbjct: 188 LIHNGVPLCESQVIVQYVDEVWS 256
Score = 119 bits (255), Expect(3) = 8e-037
Identities = 53/90 (58%), Positives = 62/90 (68%)
Frame = -3 / -1
Query: 363 GWEDRPAGEQLVDVLHDDE*LADGLTVVDEHGHLLVHRVGLEQELTLVGYVLLDVLVTHS 184
G + G LVDVLHDD LA+ VVDEHGHLLVHRV E+EL LV +V LDVLV H+
Sbjct: 277 GEDGGAGGPDLVDVLHDDLRLAERHAVVDEHGHLLVHRVVAEEELALVQHVRLDVLVAHA 98
Query: 183 FHVQRQAHAEHERAHLQAEDLKTLLARHCF 94
HVQRQ A HERAH Q + L+ ++ HCF
Sbjct: 97 LHVQRQPDAGHERAHHQPQQLQVSVSGHCF 8
Score = 84.5 bits (178), Expect(4) = 2e-057
Identities = 33/67 (49%), Positives = 38/67 (56%)
Frame = +1 / +2
Query: 340 AGRPILPTDPYERATARFWAAYADDKLFPAWYGMVXXXXXXXXXXXXXXXXXXIEHMEVT 519
AG PILP DPY RATARFWAAY DDKLFPAW G++ + +EV
Sbjct: 257 AGAPILPADPYARATARFWAAYVDDKLFPAWLGILLAPTEAARAEKVDATLAALAQLEVA 436
Query: 520 FAKCSGG 540
A+C G
Sbjct: 437 AAECLDG 457
Score = 72.5 bits (152), Expect(3) = 3e-033
Identities = 33/72 (45%), Positives = 39/72 (54%)
Frame = -1 / -2
Query: 539 PPEHLAKVTSMCXXXXXXXXXXXXXXXXXXXFTMPYHAGNNLSSA*AAQKRAVARS*GSV 360
P H A TS C MP AGN+LSS *AAQKRAVAR+*GS
Sbjct: 456 PSRHSAAATSSCASAASVASTFSALAASVGARRMPSQAGNSLSST*AAQKRAVARA*GSA 277
Query: 359 GRIGRPANSSST 324
GR+G PA+ +S+
Sbjct: 276 GRMGAPADQTSS 241
Score = 64.3 bits (134), Expect(3) = 3e-033
Identities = 24/29 (82%), Positives = 25/29 (86%)
Frame = -1 / -2
Query: 335 SSSTYCMMTSDSQMGLPLWMSTGTFLCTG 249
+SSTYC MT DSQ G PLWMSTGTFLCTG
Sbjct: 249 TSSTYCTMTCDSQSGTPLWMSTGTFLCTG 163
Score = 43.7 bits (89), Expect(3) = 3e-033
Identities = 19/32 (59%), Positives = 20/32 (62%)
Frame = -1 / -2
Query: 188 TPFMFSAKHTRSTNGLTCRPRTLRPSLPAIVS 93
TPFM SA TR TNGLT P + R PAI S
Sbjct: 102 TPFMCSASRTRVTNGLTINPSSFRSPSPAIAS 7
Score = 42.8 bits (87), Expect(3) = 8e-037
Identities = 20/31 (64%), Positives = 21/31 (67%)
Frame = -3 / -1
Query: 432 PRWKQLVVGVGSPEASSGALVGVGWEDRPAG 340
P +QLVV VG PEA GA VGVG ED AG
Sbjct: 349 PGGEQLVVDVGGPEAGGGAGVGVGGEDGGAG 257
Score = 31.8 bits (63), Expect(4) = 2e-057
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +1 / +2
Query: 535 GGNAFFGGDSIGYVDIVLTCS 597
G FGGDSIG++D+ + C+
Sbjct: 458 GRRPLFGGDSIGFLDLAVRCN 520
Score = 29.9 bits (59), Expect(3) = 8e-037
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -1 / -2
Query: 614 PEQEGAEHVSTMST*PMESPPKKALPP 534
P + H++ S PMESPP K L P
Sbjct: 537 PPSKNMLHLTARSRNPMESPPNKGLLP 457
Score = 24.0 bits (46), Expect(4) = 2e-057
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +3 / +1
Query: 663 KTPLLAAWAERF 698
+TPLL+ WA RF
Sbjct: 580 RTPLLSVWAWRF 615
>gb|AV908971.1|AV908971 AV908971 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak11b21 5', mRNA sequence
Length = 552
Score = 132 bits (283), Expect(3) = 9e-057
Identities = 55/76 (72%), Positives = 65/76 (85%)
Frame = +1 / +2
Query: 115 GLKVLGLQVSPFVLRVCLALNMKGVSYEYVEEDISNKSELLLKSNPVHKKVPVLIHNGKP 294
GLK+LGL VSPFV+RV +AL MK V YEY+E+D+ K ELLLKSNPVH KVPVLIH+GK
Sbjct: 11 GLKLLGLTVSPFVIRVRMALQMKRVGYEYMEQDLFTKGELLLKSNPVHMKVPVLIHDGKS 190
Query: 295 ICESLVIMQYVDELFA 342
ICESL I+QYVDE++A
Sbjct: 191 ICESLAIVQYVDEVWA 238
Score = 110 bits (234), Expect(2) = 9e-033
Identities = 48/76 (63%), Positives = 56/76 (73%)
Frame = -3 / -3
Query: 342 GEQLVDVLHDDE*LADGLTVVDEHGHLLVHRVGLEQELTLVGYVLLDVLVTHSFHVQRQA 163
G LVDVLHD + LADG VVDEH L VHRVGLE+EL L VLL VLV H+FH+Q A
Sbjct: 238 GPDLVDVLHDGQRLADGFAVVDEHRDLHVHRVGLEEELALGEQVLLHVLVAHAFHLQCHA 59
Query: 162 HAEHERAHLQAEDLKT 115
+ +HERAH QA+ L+T
Sbjct: 58 YTDHERAHRQAQQLQT 11
Score = 104 bits (221), Expect(3) = 9e-057
Identities = 40/82 (48%), Positives = 48/82 (58%)
Frame = +1 / +2
Query: 343 GRPILPTDPYERATARFWAAYADDKLFPAWYGMVXXXXXXXXXXXXXXXXXXIEHMEVTF 522
G ILP DPY+RA ARFWAAYAD KL PAW G++ I +E F
Sbjct: 245 GTSILPADPYDRAAARFWAAYADSKLLPAWVGIMWAATEEERAEKVGDTLAAIGQLEEAF 424
Query: 523 AKCSGGNAFFGGDSIGYVDIVL 588
KCS G FF GDS+GY+D+V+
Sbjct: 425 GKCSNGKPFFAGDSVGYLDLVV 490
Score = 74.4 bits (156), Expect(2) = 5e-026
Identities = 40/102 (39%), Positives = 48/102 (47%)
Frame = -1 / -1
Query: 587 STMST*PMESPPKKALPPEHLAKVTSMCXXXXXXXXXXXXXXXXXXXFTMPYHAGNNLSS 408
+T S *P ESP KK P EH +S MP HAG +L S
Sbjct: 489 TTRSR*PTESPAKKGFPLEHFPNASSSWPIAASVSPTFSALSSSVAAHMMPTHAGKSLLS 310
Query: 407 A*AAQKRAVARS*GSVGRIGRPANSSSTYCMMTSDSQMGLPL 282
A*AAQKRA ARS*GS GR+ P + ++ T S + L
Sbjct: 309 A*AAQKRAAARS*GSAGRMEVPVAAQTSSTYCTMASDSQMDL 184
Score = 63.8 bits (133), Expect(2) = 5e-026
Identities = 28/55 (50%), Positives = 33/55 (60%)
Frame = -2 / -2
Query: 295 WAYRCG*ARAPSCAPGWT*AGAHSCWICPPRRTRNSLLSCSAPSTRGARTGSPAG 131
W R G*A PSCAPGWT* GA P TR+ +S + P G+RTGSP+G
Sbjct: 191 WICRRG*APGPSCAPGWT*GGARPW*TGPAPCTRSPRVSSAVPCVHGSRTGSPSG 27
Score = 50.6 bits (104), Expect(2) = 9e-033
Identities = 21/31 (67%), Positives = 24/31 (77%)
Frame = -3 / -3
Query: 444 HHAVPRWKQLVVGVGSPEASSGALVGVGWED 352
H A PR ++L VGVG PEAS GA+VGVG ED
Sbjct: 346 HDAHPRRQELAVGVGGPEASGGAVVGVGGED 254
Score = 23.1 bits (44), Expect(3) = 9e-057
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +1 / +3
Query: 586 LTCSAPSCSGSRRCAGFSTWRSL 654
++ S SCSGSR C S SL
Sbjct: 480 ISSSVRSCSGSRCCGRCSASWSL 548
>gb|AV913623.1|AV913623 AV913623 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags22l18 5', mRNA sequence
Length = 676
Score = 127 bits (272), Expect(4) = 6e-056
Identities = 51/75 (68%), Positives = 64/75 (85%)
Frame = +1 / +1
Query: 121 KVLGLQVSPFVLRVCLALNMKGVSYEYVEEDISNKSELLLKSNPVHKKVPVLIHNGKPIC 300
K+LG SPFV+R LAL+ KG+S+E VEED++NKSELLL+SNP KKVPVLIHNGKP+C
Sbjct: 100 KLLGTFASPFVMRAKLALSFKGLSFEDVEEDLANKSELLLESNPAQKKVPVLIHNGKPVC 279
Query: 301 ESLVIMQYVDELFAG 345
+S VI+QY+DE F+G
Sbjct: 280 DSQVIVQYIDEAFSG 324
Score = 97.7 bits (207), Expect(2) = 4e-028
Identities = 43/80 (53%), Positives = 57/80 (71%)
Frame = -3 / -2
Query: 345 AGEQLVDVLHDDE*LADGLTVVDEHGHLLVHRVGLEQELTLVGYVLLDVLVTHSFHVQRQ 166
A E LVDVLHDD +ADGL V+DEHGHLL+ RVGLE+E LVG VLLDVL + +R+
Sbjct: 324 AAEGLVDVLHDDLRVADGLAVMDEHGHLLLRRVGLEEEFALVGEVLLDVLEAQALEAERE 145
Query: 165 AHAEHERAHLQAEDLKTLLA 106
+ ERA +A+ L+ +++
Sbjct: 144 LRSHDERAGERAQ*LRLIVS 85
Score = 59.7 bits (124), Expect(4) = 6e-056
Identities = 21/30 (70%), Positives = 23/30 (76%)
Frame = +1 / +1
Query: 343 GRPILPTDPYERATARFWAAYADDKLFPAW 432
G +LP DPYERA ARFWAAY DDKL +W
Sbjct: 328 GTSLLPADPYERAVARFWAAYVDDKLLASW 417
Score = 47.3 bits (97), Expect(4) = 6e-056
Identities = 16/30 (53%), Positives = 20/30 (66%)
Frame = +1 / +1
Query: 499 IEHMEVTFAKCSGGNAFFGGDSIGYVDIVL 588
+E ME F CS G FFGGD +GY+D+ L
Sbjct: 484 VETMEAAFKACSNGKPFFGGDRVGYLDVTL 573
Score = 47.3 bits (97), Expect(2) = 4e-028
Identities = 20/28 (71%), Positives = 23/28 (82%)
Frame = -3 / -2
Query: 432 PRWKQLVVGVGSPEASSGALVGVGWEDR 349
PR ++LVV VG PEAS GALVGVG E+R
Sbjct: 417 PRRQELVVDVGGPEASDGALVGVGGEER 334
Score = 40.5 bits (82), Expect(4) = 6e-056
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +3 / +1
Query: 594 LGSFLFWFEAVRRVFDLEIINASKTPLLAAWAERF 698
LG + W A ++ + + + +K+PLLAAW ERF
Sbjct: 571 LGGLVVWVHAGAALYGMRLFDDAKSPLLAAWVERF 675
>gb|CA022668.1|CA022668 HZ44A05r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ44A05
5-PRIME, mRNA sequence
Length = 588
Score = 139 bits (298), Expect(3) = 1e-055
Identities = 58/82 (70%), Positives = 68/82 (82%)
Frame = +1 / +1
Query: 94 ETMAGKEGLKVLGLQVSPFVLRVCLALNMKGVSYEYVEEDISNKSELLLKSNPVHKKVPV 273
E MAG LK+LGL VSPFV RV LAL+MKGV YEY+E D+ +K ELLL+ NPVHKKVPV
Sbjct: 19 EAMAGDGDLKLLGLMVSPFVTRVRLALHMKGVGYEYIETDVLDKGELLLRYNPVHKKVPV 198
Query: 274 LIHNGKPICESLVIMQYVDELF 339
LIHNG P+CES VI+QYVDE++
Sbjct: 199 LIHNGVPLCESQVIVQYVDEVW 264
Score = 118 bits (253), Expect(3) = 9e-036
Identities = 53/90 (58%), Positives = 61/90 (67%)
Frame = -3 / -1
Query: 363 GWEDRPAGEQLVDVLHDDE*LADGLTVVDEHGHLLVHRVGLEQELTLVGYVLLDVLVTHS 184
G + G LVDVLHDD LA+ VVDEHGHLLVHRV E+EL LV +V LDVLV H+
Sbjct: 288 GEDGGAGGPDLVDVLHDDLRLAERHAVVDEHGHLLVHRVVAEEELALVQHVRLDVLVAHA 109
Query: 183 FHVQRQAHAEHERAHLQAEDLKTLLARHCF 94
HVQRQ A HERAH Q + L+ + HCF
Sbjct: 108 LHVQRQPDAGHERAHHQPQQLQVSVPGHCF 19
Score = 84.5 bits (178), Expect(3) = 1e-055
Identities = 33/67 (49%), Positives = 38/67 (56%)
Frame = +1 / +1
Query: 340 AGRPILPTDPYERATARFWAAYADDKLFPAWYGMVXXXXXXXXXXXXXXXXXXIEHMEVT 519
AG PILP DPY RATARFWAAY DDKLFPAW G++ + +EV
Sbjct: 268 AGAPILPADPYARATARFWAAYVDDKLFPAWLGILLAPTEAARAEKVDATLAALAQLEVA 447
Query: 520 FAKCSGG 540
A+C G
Sbjct: 448 AAECLDG 468
Score = 72.1 bits (151), Expect(3) = 3e-033
Identities = 33/72 (45%), Positives = 38/72 (52%)
Frame = -1 / -2
Query: 539 PPEHLAKVTSMCXXXXXXXXXXXXXXXXXXXFTMPYHAGNNLSSA*AAQKRAVARS*GSV 360
P H A TS C MP AGN+LSS *AAQKRAVAR+*GS
Sbjct: 467 PSRHSAAATSSCASAASVASTFSALAASVGARRMPSQAGNSLSST*AAQKRAVARA*GSA 288
Query: 359 GRIGRPANSSST 324
GR+G PA +S+
Sbjct: 287 GRMGAPAGQTSS 252
Score = 72.1 bits (151), Expect(3) = 5e-021
Identities = 32/49 (65%), Positives = 33/49 (67%)
Frame = +3 / +3
Query: 138 GEPVRAPRVLGAEHERSELRVRRGGHIQQE*APAQVQPGAQEGARAHPQ 284
GEPVR PR GA HE LRV R G Q AP +QPGAQEGARAHPQ
Sbjct: 63 GEPVRDPRPAGAAHEGRGLRVHRDGRAGQGRAPPPLQPGAQEGARAHPQ 209
Score = 64.3 bits (134), Expect(3) = 3e-033
Identities = 24/29 (82%), Positives = 25/29 (86%)
Frame = -1 / -2
Query: 335 SSSTYCMMTSDSQMGLPLWMSTGTFLCTG 249
+SSTYC MT DSQ G PLWMSTGTFLCTG
Sbjct: 260 TSSTYCTMTCDSQSGTPLWMSTGTFLCTG 174
Score = 43.7 bits (89), Expect(3) = 3e-033
Identities = 19/32 (59%), Positives = 20/32 (62%)
Frame = -1 / -2
Query: 188 TPFMFSAKHTRSTNGLTCRPRTLRPSLPAIVS 93
TPFM SA TR TNGLT P + R PAI S
Sbjct: 113 TPFMCSASRTRVTNGLTINPSSFRSPSPAIAS 18
Score = 42.8 bits (87), Expect(3) = 9e-036
Identities = 20/31 (64%), Positives = 21/31 (67%)
Frame = -3 / -1
Query: 432 PRWKQLVVGVGSPEASSGALVGVGWEDRPAG 340
P +QLVV VG PEA GA VGVG ED AG
Sbjct: 360 PGGEQLVVDVGGPEAGGGAGVGVGGEDGGAG 268
Score = 40.0 bits (81), Expect(3) = 5e-021
Identities = 18/27 (66%), Positives = 18/27 (66%)
Frame = +2 / +2
Query: 353 SSQPTPTSAPLLASGLPTPTTSCFQRG 433
SS PTPT AP ASG PT TTSC G
Sbjct: 281 SSPPTPTPAPPPASGPPTSTTSCSPPG 361
Score = 32.2 bits (64), Expect(3) = 1e-055
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +1 / +1
Query: 535 GGNAFFGGDSIGYVDIVLTCSAPSCSGSRRCAG 633
G FGGDSIG++D+ + C+ RR G
Sbjct: 469 GRRPLFGGDSIGFLDLAVGCNMFWMEALRRMFG 567
Score = 29.9 bits (59), Expect(3) = 5e-021
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = +1 / +2
Query: 595 SAPSCSGSRRCAGFSTWRSLT 657
S +CSG RRCAG S RS T
Sbjct: 521 SGATCSGWRRCAGCSA*RSST 583
Score = 27.2 bits (53), Expect(3) = 9e-036
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = -1 / -2
Query: 593 HVSTMST*PMESPPKKALPP 534
H + S PMESPP K L P
Sbjct: 527 HPTARSRNPMESPPNKGLLP 468
>gb|BF264380.2|BF264380 HV_CEa0009E08f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0009E08f, mRNA sequence
Length = 848
Score = 96.4 bits (204), Expect(4) = 2e-055
Identities = 35/51 (68%), Positives = 45/51 (88%)
Frame = +1 / +3
Query: 193 YEYVEEDISNKSELLLKSNPVHKKVPVLIHNGKPICESLVIMQYVDELFAG 345
YEY EED+++KS+LLL SNPVH KVPVL+H GKP+CES++I+QY+DE F G
Sbjct: 117 YEYAEEDLTSKSDLLLASNPVHAKVPVLLHGGKPVCESMLIVQYLDEAFPG 269
Score = 94.5 bits (200), Expect(4) = 2e-055
Identities = 37/83 (44%), Positives = 46/83 (55%)
Frame = +1 / +3
Query: 340 AGRPILPTDPYERATARFWAAYADDKLFPAWYGMVXXXXXXXXXXXXXXXXXXIEHMEVT 519
+G +LP DP++RA ARFWAAYADD F +W ++ ME
Sbjct: 276 SGPALLPGDPHDRAVARFWAAYADDHFFASWIKAFAGTTDDERAAATEAAAAALQKMEGA 455
Query: 520 FAKCSGGNAFFGGDSIGYVDIVL 588
F +CS G AFFGGD+ GYVDI L
Sbjct: 456 FGECSKGKAFFGGDAPGYVDIAL 524
Score = 72.1 bits (151), Expect(2) = 4e-025
Identities = 33/51 (64%), Positives = 38/51 (74%)
Frame = -3 / -1
Query: 345 AGEQLVDVLHDDE*LADGLTVVDEHGHLLVHRVGLEQELTLVGYVLLDVLV 193
AGE LV+VLHD+ LADGL V+EHG L VH VG E+E+ L G VLL VLV
Sbjct: 269 AGEGLVEVLHDEHGLADGLAAVEEHGDLGVHGVGGEEEVALAGEVLLGVLV 117
Score = 62.9 bits (131), Expect(2) = 4e-025
Identities = 35/82 (42%), Positives = 36/82 (43%)
Frame = -1 / -2
Query: 587 STMST*PMESPPKKALPPEHLAKVTSMCXXXXXXXXXXXXXXXXXXXFTMPYHAGNNLSS 408
S MST P SPPKKALP EH S+ H SS
Sbjct: 523 SAMSTYPGASPPKKALPLEHSPNAPSIFCSAAAAASVAAALSSSVVPANALIHEAKKWSS 344
Query: 407 A*AAQKRAVARS*GSVGRIGRP 342
A*AAQKRA ARS GS GR P
Sbjct: 343 A*AAQKRATARSWGSPGRRAGP 278
Score = 49.6 bits (102), Expect(4) = 2e-055
Identities = 19/49 (38%), Positives = 30/49 (61%)
Frame = +3 / +3
Query: 594 LGSFLFWFEAVRRVFDLEIINASKTPLLAAWAERFVGTVEAKEVVPLPT 740
LG ++ W A + V +++++A++TPLL AWAERF K +P T
Sbjct: 522 LGGYVAWMRAFQAVGGVDLLDAARTPLLGAWAERFAAPESGKGGMPEST 668
Score = 32.7 bits (65), Expect(4) = 2e-055
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = +1 / +3
Query: 118 LKVLGLQVSPFVLRVCLALNMKGVS 192
LK+LG SPFV R +AL++KG++
Sbjct: 39 LKLLGFWASPFVHRARVALHLKGIT 113
>gb|BF622265.2|BF622265 HVSMEa0002G13f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0002G13f, mRNA sequence
Length = 698
Score = 134 bits (287), Expect(2) = 3e-055
Identities = 55/85 (64%), Positives = 72/85 (84%)
Frame = +1 / +3
Query: 88 ERETMAGKEGLKVLGLQVSPFVLRVCLALNMKGVSYEYVEEDISNKSELLLKSNPVHKKV 267
++ MA + LK+LGL VSPFV+RV +AL+MKG+SYEY+E+D+ NKSELLLKSNPV KKV
Sbjct: 12 QKTAMAAEGDLKLLGLSVSPFVVRVRMALHMKGLSYEYIEQDLFNKSELLLKSNPVEKKV 191
Query: 268 PVLIHNGKPICESLVIMQYVDELFA 342
PVLIH+GK I +S I+QY+DE++A
Sbjct: 192 PVLIHDGKTILDSSAIVQYIDEVWA 266
Score = 105 bits (225), Expect(3) = 1e-031
Identities = 46/88 (52%), Positives = 58/88 (65%)
Frame = -3 / -1
Query: 342 GEQLVDVLHDDE*LADGLTVVDEHGHLLVHRVGLEQELTLVGYVLLDVLVTHSFHVQRQA 163
G VDVLHD + GL VVDEHGHLL+HRVGLE++L LV VL D+LV + HVQR A
Sbjct: 266 GPDFVDVLHDGRRIEYGLAVVDEHGHLLLHRVGLEEKLALVEEVLFDILVAQALHVQRHA 87
Query: 162 HAEHERAHLQAEDLKTLLARHCFPLQIY 79
+ +E AH QA L+ + HC L ++
Sbjct: 86 NTNYEWAH*QA*QLQVSFSCHCCLLSLF 3
Score = 101 bits (216), Expect(2) = 3e-055
Identities = 42/97 (43%), Positives = 53/97 (54%)
Frame = +1 / +3
Query: 343 GRPILPTDPYERATARFWAAYADDKLFPAWYGMVXXXXXXXXXXXXXXXXXXIEHMEVTF 522
G ILP DPY+RA +RFWAAYADDKLF A+ G+ +E +E F
Sbjct: 273 GPSILPVDPYDRAASRFWAAYADDKLFSAYVGINRATTKVERAEKVSETVAVLERLEEAF 452
Query: 523 AKCSGGNAFFGGDSIGYVDIVLTCSAPSCSGSRRCAG 633
AK S G AFF GDS+GY+D+ + C R+ G
Sbjct: 453 AKQSNGKAFFAGDSVGYLDLAVGCHLHWLKAQRKMFG 563
Score = 67.0 bits (140), Expect(3) = 2e-025
Identities = 30/52 (57%), Positives = 35/52 (67%)
Frame = +3 / +2
Query: 129 RPAGEPVRAPRVLGAEHERSELRVRRGGHIQQE*APAQVQPGAQEGARAHPQ 284
R EP+R+ GA HE ELRV R G +QQE A QVQPG +EGARAHP+
Sbjct: 53 RLVSEPIRSSCSHGAAHEGPELRVYRTGPLQQERASPQVQPGGEEGARAHPR 208
Score = 65.2 bits (136), Expect(3) = 1e-026
Identities = 38/104 (36%), Positives = 47/104 (45%)
Frame = -1 / -2
Query: 593 HVSTMST*PMESPPKKALPPEHLAKVTSMCXXXXXXXXXXXXXXXXXXXFTMPYHAGNNL 414
H + S P ESP K A P + LA +S MP A N+L
Sbjct: 523 HPTARSRYPTESPAKNAFPFDCLANASSSRSSTATVSLTFSALSTFVVALLMPT*AENSL 344
Query: 413 SSA*AAQKRAVARS*GSVGRIGRPANSSSTYCMMTSDSQMGLPL 282
SSA*AAQKR ARS*GS GRI P + ++ T + + L
Sbjct: 343 SSA*AAQKREAARS*GSTGRIDGPMAAQTSSMYCTMADESSMVL 212
Score = 60.6 bits (126), Expect(3) = 1e-026
Identities = 29/52 (55%), Positives = 32/52 (61%)
Frame = -2 / -3
Query: 295 WAYRCG*ARAPSCAPGWT*AGAHSCWICPPRRTRNSLLSCSAPSTRGARTGS 140
W+ R G*ARAPS PGWT* A SC P R TR+S SC+AP R GS
Sbjct: 219 WSCRRG*ARAPSSPPGWT*GEARSC*RGPVRYTRSSGPSCAAPCEHELRMGS 64
Score = 54.7 bits (113), Expect(3) = 2e-025
Identities = 21/46 (45%), Positives = 29/46 (63%)
Frame = +3 / +3
Query: 594 LGSFLFWFEAVRRVFDLEIINASKTPLLAAWAERFVGTVEAKEVVP 731
+G L W +A R++F + + A +TPLL WA+RF T KEVVP
Sbjct: 516 VGCHLHWLKAQRKMFGVVFLEAGRTPLLTGWAKRFAETDAGKEVVP 653
Score = 37.7 bits (76), Expect(3) = 1e-031
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = -3 / -1
Query: 423 KQLVVGVGSPEASSGALVGVGWEDR 349
+QLVV VG P+A GA+VGV EDR
Sbjct: 353 EQLVVRVGGPKAGGGAVVGVDGEDR 279
Score = 35.9 bits (72), Expect(3) = 2e-025
Identities = 16/24 (66%), Positives = 17/24 (70%)
Frame = +2 / +1
Query: 350 RSSQPTPTSAPLLASGLPTPTTSC 421
RSS TPT+AP A G PT TTSC
Sbjct: 280 RSSPSTPTTAPPPAFGPPTRTTSC 351
Score = 35.0 bits (70), Expect(3) = 1e-031
Identities = 19/46 (41%), Positives = 24/46 (52%)
Frame = -2 / -2
Query: 733 NGTTSFASTVPTNRSAHAANSGVLLALMISRSKTLRTASNQNKKEP 596
+GTTS ++V NR A SGVL A + LR A +Q K P
Sbjct: 655 SGTTSLPASVSANRFAQPVKSGVLPASRNTTPNILRCALSQCKWHP 518
Score = 31.8 bits (63), Expect(3) = 1e-026
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = -1 / -1
Query: 731 RHHLLRFYSPYKPLRPRSQQRSLASVNDLQVENPAHRLEPEQ 606
R+HLL +P RP +RS A + + ++ A RLEP Q
Sbjct: 653 RYHLLARVGLCEPFRPAR*ERSPAGLEEHHAKHLALRLEPVQ 528
>gb|BF625550.2|BF625550 HVSMEa0011E08f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0011E08f, mRNA sequence
Length = 639
Score = 134 bits (287), Expect(2) = 3e-055
Identities = 55/85 (64%), Positives = 72/85 (84%)
Frame = +1 / +1
Query: 88 ERETMAGKEGLKVLGLQVSPFVLRVCLALNMKGVSYEYVEEDISNKSELLLKSNPVHKKV 267
++ MA + LK+LGL VSPFV+RV +AL+MKG+SYEY+E+D+ NKSELLLKSNPV KKV
Sbjct: 25 QKTAMAAEGDLKLLGLSVSPFVVRVRMALHMKGLSYEYIEQDLFNKSELLLKSNPVEKKV 204
Query: 268 PVLIHNGKPICESLVIMQYVDELFA 342
PVLIH+GK I +S I+QY+DE++A
Sbjct: 205 PVLIHDGKTILDSSAIVQYIDEVWA 279
Score = 105 bits (225), Expect(2) = 1e-027
Identities = 46/88 (52%), Positives = 58/88 (65%)
Frame = -3 / -1
Query: 342 GEQLVDVLHDDE*LADGLTVVDEHGHLLVHRVGLEQELTLVGYVLLDVLVTHSFHVQRQA 163
G VDVLHD + GL VVDEHGHLL+HRVGLE++L LV VL D+LV + HVQR A
Sbjct: 279 GPDFVDVLHDGRRIEYGLAVVDEHGHLLLHRVGLEEKLALVEEVLFDILVAQALHVQRHA 100
Query: 162 HAEHERAHLQAEDLKTLLARHCFPLQIY 79
+ +E AH QA L+ + HC L ++
Sbjct: 99 NTNYEWAH*QA*QLQVSFSCHCCLLSLF 16
Score = 101 bits (216), Expect(2) = 3e-055
Identities = 42/97 (43%), Positives = 53/97 (54%)
Frame = +1 / +1
Query: 343 GRPILPTDPYERATARFWAAYADDKLFPAWYGMVXXXXXXXXXXXXXXXXXXIEHMEVTF 522
G ILP DPY+RA +RFWAAYADDKLF A+ G+ +E +E F
Sbjct: 286 GPSILPVDPYDRAASRFWAAYADDKLFSAYVGINRATTKVERAEKVSETVAVLERLEEAF 465
Query: 523 AKCSGGNAFFGGDSIGYVDIVLTCSAPSCSGSRRCAG 633
AK S G AFF GDS+GY+D+ + C R+ G
Sbjct: 466 AKQSNGKAFFAGDSVGYLDLAVGCHLHWLKAQRKMFG 576
Score = 67.0 bits (140), Expect(3) = 9e-023
Identities = 30/52 (57%), Positives = 35/52 (67%)
Frame = +3 / +3
Query: 129 RPAGEPVRAPRVLGAEHERSELRVRRGGHIQQE*APAQVQPGAQEGARAHPQ 284
R EP+R+ GA HE ELRV R G +QQE A QVQPG +EGARAHP+
Sbjct: 66 RLVSEPIRSSCSHGAAHEGPELRVYRTGPLQQERASPQVQPGGEEGARAHPR 221
Score = 65.2 bits (136), Expect(2) = 2e-022
Identities = 38/104 (36%), Positives = 47/104 (45%)
Frame = -1 / -2
Query: 593 HVSTMST*PMESPPKKALPPEHLAKVTSMCXXXXXXXXXXXXXXXXXXXFTMPYHAGNNL 414
H + S P ESP K A P + LA +S MP A N+L
Sbjct: 536 HPTARSRYPTESPAKNAFPFDCLANASSSRSSTATVSLTFSALSTFVVALLMPT*AENSL 357
Query: 413 SSA*AAQKRAVARS*GSVGRIGRPANSSSTYCMMTSDSQMGLPL 282
SSA*AAQKR ARS*GS GRI P + ++ T + + L
Sbjct: 356 SSA*AAQKREAARS*GSTGRIDGPMAAQTSSMYCTMADESSMVL 225
Score = 60.6 bits (126), Expect(2) = 2e-022
Identities = 29/52 (55%), Positives = 32/52 (61%)
Frame = -2 / -3
Query: 295 WAYRCG*ARAPSCAPGWT*AGAHSCWICPPRRTRNSLLSCSAPSTRGARTGS 140
W+ R G*ARAPS PGWT* A SC P R TR+S SC+AP R GS
Sbjct: 232 WSCRRG*ARAPSSPPGWT*GEARSC*RGPVRYTRSSGPSCAAPCEHELRMGS 77
Score = 45.5 bits (93), Expect(3) = 9e-023
Identities = 16/35 (45%), Positives = 24/35 (68%)
Frame = +3 / +1
Query: 594 LGSFLFWFEAVRRVFDLEIINASKTPLLAAWAERF 698
+G L W +A R++F + + A +TPLLA WA+RF
Sbjct: 529 VGCHLHWLKAQRKMFGVVFLEAGRTPLLAGWAKRF 633
Score = 37.7 bits (76), Expect(2) = 1e-027
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = -3 / -1
Query: 423 KQLVVGVGSPEASSGALVGVGWEDR 349
+QLVV VG P+A GA+VGV EDR
Sbjct: 366 EQLVVRVGGPKAGGGAVVGVDGEDR 292
Score = 35.9 bits (72), Expect(3) = 9e-023
Identities = 16/24 (66%), Positives = 17/24 (70%)
Frame = +2 / +2
Query: 350 RSSQPTPTSAPLLASGLPTPTTSC 421
RSS TPT+AP A G PT TTSC
Sbjct: 293 RSSPSTPTTAPPPAFGPPTRTTSC 364
>gb|BF624618.2|BF624618 HVSMEa0017E14f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0017E14f, mRNA sequence
Length = 887
Score = 153 bits (329), Expect(4) = 9e-055
Identities = 61/87 (70%), Positives = 76/87 (87%)
Frame = +1 / +2
Query: 85 LERETMAGKEGLKVLGLQVSPFVLRVCLALNMKGVSYEYVEEDISNKSELLLKSNPVHKK 264
+++ETMAG E LK+LG SPFV RV LAL++KG+S+E VEED+ NKSELLL SNPVHKK
Sbjct: 44 IKQETMAGGEDLKLLGAWASPFVTRVKLALSLKGLSFEDVEEDLGNKSELLLSSNPVHKK 223
Query: 265 VPVLIHNGKPICESLVIMQYVDELFAG 345
VPVL+HNGKP+CES++I+QY+DE FAG
Sbjct: 224 VPVLVHNGKPVCESVIILQYIDEAFAG 304
Score = 92.7 bits (196), Expect(2) = 1e-023
Identities = 42/82 (51%), Positives = 54/82 (65%)
Frame = -3 / -2
Query: 345 AGEQLVDVLHDDE*LADGLTVVDEHGHLLVHRVGLEQELTLVGYVLLDVLVTHSFHVQRQ 166
AGE+L+DVL DD *LA GL++V+EH HLLVH V E+EL LV VLLD+L + QR+
Sbjct: 304 AGERLIDVLKDDH*LAHGLSIVNEHWHLLVHWVRAEEELALVAQVLLDILEAQALEAQRK 125
Query: 165 AHAEHERAHLQAEDLKTLLARH 100
H +RA AE L+ + H
Sbjct: 124 LHPGDKRACPSAEQLQVFSSGH 59
Score = 56.5 bits (117), Expect(4) = 9e-055
Identities = 20/30 (66%), Positives = 23/30 (76%)
Frame = +1 / +2
Query: 343 GRPILPTDPYERATARFWAAYADDKLFPAW 432
G +LP+DPY+RA ARFWAAY DDKL W
Sbjct: 308 GPSLLPSDPYQRAVARFWAAYIDDKLVAPW 397
Score = 37.3 bits (75), Expect(2) = 1e-023
Identities = 19/36 (52%), Positives = 24/36 (66%)
Frame = -1 / -3
Query: 431 HAGNNLSSA*AAQKRAVARS*GSVGRIGRPANSSST 324
H +LSS *AAQKRA AR *GS GR P ++++
Sbjct: 396 HGATSLSSM*AAQKRATARW*GSEGRREGPMPANAS 289
Score = 32.7 bits (65), Expect(4) = 9e-055
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +1 / +2
Query: 499 IEHMEVTFAKCSGGNAFFGGDSIGYVDIVL 588
+E +E +CS G +FGG+++ VD+ L
Sbjct: 464 VEMLEGALRECS*GEGYFGGETVXLVDVSL 553
Score = 28.1 bits (55), Expect(4) = 9e-055
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +3 / +3
Query: 594 LGSFLFWFEAVRRVFDLEIINASKTPLLAAWAE 692
LGS L A + + +I + KTP AAW +
Sbjct: 552 LGSLLSLLNATKVMSGTKIFDPCKTPFFAAWMD 650
>gb|BG299389.1|BG299389 HVSMEa0019L19f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0019L19f, mRNA sequence
Length = 624
Score = 139 bits (299), Expect(3) = 9e-055
Identities = 58/83 (69%), Positives = 69/83 (83%)
Frame = +1 / +2
Query: 94 ETMAGKEGLKVLGLQVSPFVLRVCLALNMKGVSYEYVEEDISNKSELLLKSNPVHKKVPV 273
E MAG LK+LGL VSPFV RV LAL+MKGV YEY+E D+ +K ELLL+ NPVHKKVPV
Sbjct: 47 EAMAGDGDLKLLGLMVSPFVTRVRLALHMKGVGYEYIETDVLDKGELLLRYNPVHKKVPV 226
Query: 274 LIHNGKPICESLVIMQYVDELFA 342
LIHNG P+CES VI+QYVDE+++
Sbjct: 227 LIHNGVPLCESQVIVQYVDEVWS 295
Score = 119 bits (255), Expect(3) = 3e-034
Identities = 53/90 (58%), Positives = 62/90 (68%)
Frame = -3 / -3
Query: 363 GWEDRPAGEQLVDVLHDDE*LADGLTVVDEHGHLLVHRVGLEQELTLVGYVLLDVLVTHS 184
G + G LVDVLHDD LA+ VVDEHGHLLVHRV E+EL LV +V LDVLV H+
Sbjct: 316 GEDGGAGGPDLVDVLHDDLRLAERHAVVDEHGHLLVHRVVAEEELALVQHVRLDVLVAHA 137
Query: 183 FHVQRQAHAEHERAHLQAEDLKTLLARHCF 94
HVQRQ A HERAH Q + L+ ++ HCF
Sbjct: 136 LHVQRQPDAGHERAHHQPQQLQVSVSGHCF 47
Score = 83.5 bits (176), Expect(3) = 9e-055
Identities = 37/67 (55%), Positives = 42/67 (62%)
Frame = +1 / +2
Query: 340 AGRPILPTDPYERATARFWAAYADDKLFPAWYGMVXXXXXXXXXXXXXXXXXXIEHMEVT 519
AG PILP DPY RATARFWAAY DDKLFPAW G++ + +EV
Sbjct: 296 AGAPILPADPYARATARFWAAYVDDKLFPAWLGILLAPTEAARAXKVXXTLAXLAQLEVA 475
Query: 520 FAKCSGG 540
A+C G
Sbjct: 476 AAECLXG 496
Score = 70.3 bits (147), Expect(3) = 1e-032
Identities = 37/72 (51%), Positives = 43/72 (59%)
Frame = -1 / -1
Query: 539 PPEHLAKVTSMCXXXXXXXXXXXXXXXXXXXFTMPYHAGNNLSSA*AAQKRAVARS*GSV 360
P H A TS C MP AGN+LSS *AAQKRAVAR+*GS
Sbjct: 495 PXRHSAAATSNCASXASVXXTXSALAASVGARRMPSQAGNSLSST*AAQKRAVARA*GSA 316
Query: 359 GRIGRPANSSST 324
GR+G PA+ +S+
Sbjct: 315 GRMGAPADQTSS 280
Score = 64.3 bits (134), Expect(3) = 1e-032
Identities = 24/29 (82%), Positives = 25/29 (86%)
Frame = -1 / -1
Query: 335 SSSTYCMMTSDSQMGLPLWMSTGTFLCTG 249
+SSTYC MT DSQ G PLWMSTGTFLCTG
Sbjct: 288 TSSTYCTMTCDSQSGTPLWMSTGTFLCTG 202
Score = 43.7 bits (89), Expect(3) = 1e-032
Identities = 19/32 (59%), Positives = 20/32 (62%)
Frame = -1 / -1
Query: 188 TPFMFSAKHTRSTNGLTCRPRTLRPSLPAIVS 93
TPFM SA TR TNGLT P + R PAI S
Sbjct: 141 TPFMCSASRTRVTNGLTINPSSFRSPSPAIAS 46
Score = 39.1 bits (79), Expect(3) = 3e-034
Identities = 18/31 (58%), Positives = 20/31 (64%)
Frame = -3 / -3
Query: 432 PRWKQLVVGVGSPEASSGALVGVGWEDRPAG 340
P +QLVV VG P+ GA VGVG ED AG
Sbjct: 388 PGGEQLVVDVGGPKTGGGAGVGVGGEDGGAG 296
Score = 29.5 bits (58), Expect(3) = 9e-055
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = +1 / +2
Query: 547 FFGGDSIGYVDIVLTCS 597
F GGDSIG++D+ + C+
Sbjct: 509 FVGGDSIGFLDLAVGCN 559
Score = 24.9 bits (48), Expect(3) = 3e-034
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = -1 / -1
Query: 593 HVSTMST*PMESPPKKAL 540
H + S PMESPP K L
Sbjct: 555 HPTARSRNPMESPPTKGL 502
>gb|BE195630.3|BE195630 HVSMEh0089P24f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0089P24f, mRNA sequence
Length = 799
Score = 134 bits (287), Expect(2) = 4e-054
Identities = 55/85 (64%), Positives = 72/85 (84%)
Frame = +1 / +1
Query: 88 ERETMAGKEGLKVLGLQVSPFVLRVCLALNMKGVSYEYVEEDISNKSELLLKSNPVHKKV 267
++ MA + LK+LGL VSPFV+RV +AL+MKG+SYEY+E+D+ NKSELLLKSNPV KKV
Sbjct: 22 QKTAMAAEGDLKLLGLSVSPFVVRVRMALHMKGLSYEYIEQDLFNKSELLLKSNPVEKKV 201
Query: 268 PVLIHNGKPICESLVIMQYVDELFA 342
PVLIH+GK I +S I+QY+DE++A
Sbjct: 202 PVLIHDGKTILDSSAIVQYIDEVWA 276
Score = 105 bits (225), Expect(2) = 1e-027
Identities = 46/88 (52%), Positives = 58/88 (65%)
Frame = -3 / -2
Query: 342 GEQLVDVLHDDE*LADGLTVVDEHGHLLVHRVGLEQELTLVGYVLLDVLVTHSFHVQRQA 163
G VDVLHD + GL VVDEHGHLL+HRVGLE++L LV VL D+LV + HVQR A
Sbjct: 276 GPDFVDVLHDGRRIEYGLAVVDEHGHLLLHRVGLEEKLALVEEVLFDILVAQALHVQRHA 97
Query: 162 HAEHERAHLQAEDLKTLLARHCFPLQIY 79
+ +E AH QA L+ + HC L ++
Sbjct: 96 NTNYEWAH*QA*QLQVSFSCHCCLLSLF 13
Score = 97.7 bits (207), Expect(2) = 4e-054
Identities = 41/97 (42%), Positives = 52/97 (53%)
Frame = +1 / +1
Query: 343 GRPILPTDPYERATARFWAAYADDKLFPAWYGMVXXXXXXXXXXXXXXXXXXIEHMEVTF 522
G ILP DPY+RA RFWAAYADDKLF A+ G+ +E +E F
Sbjct: 283 GPSILPVDPYDRAAFRFWAAYADDKLFSAYVGINRATTKVERAEKVIETVAVLERLEEAF 462
Query: 523 AKCSGGNAFFGGDSIGYVDIVLTCSAPSCSGSRRCAG 633
AK S G AFF GDS+GY+++ + C R+ G
Sbjct: 463 AKQSNGKAFFXGDSVGYLELAVGCHLHWLKAQRKMFG 573
Score = 67.0 bits (140), Expect(3) = 6e-023
Identities = 30/52 (57%), Positives = 35/52 (67%)
Frame = +3 / +3
Query: 129 RPAGEPVRAPRVLGAEHERSELRVRRGGHIQQE*APAQVQPGAQEGARAHPQ 284
R EP+R+ GA HE ELRV R G +QQE A QVQPG +EGARAHP+
Sbjct: 63 RLVSEPIRSSCSHGAAHEGPELRVYRTGPLQQERASPQVQPGGEEGARAHPR 218
Score = 64.8 bits (135), Expect(2) = 3e-022
Identities = 39/104 (37%), Positives = 48/104 (46%)
Frame = -1 / -3
Query: 593 HVSTMST*PMESPPKKALPPEHLAKVTSMCXXXXXXXXXXXXXXXXXXXFTMPYHAGNNL 414
H + S P ESP K A P + LA +S MP A N+L
Sbjct: 533 HPTASSRYPTESPXKNAFPFDCLANASSSRSSTATVSITFSALSTXVVALLMPT*AENSL 354
Query: 413 SSA*AAQKRAVARS*GSVGRIGRPANSSSTYCMMTSDSQMGLPL 282
SSA*AAQKR ARS*GS GRI P + ++ T + + L
Sbjct: 353 SSA*AAQKRKAARS*GSTGRIDGPMAAQTSSMYCTMADESSMVL 222
Score = 60.6 bits (126), Expect(2) = 3e-022
Identities = 29/52 (55%), Positives = 32/52 (61%)
Frame = -2 / -1
Query: 295 WAYRCG*ARAPSCAPGWT*AGAHSCWICPPRRTRNSLLSCSAPSTRGARTGS 140
W+ R G*ARAPS PGWT* A SC P R TR+S SC+AP R GS
Sbjct: 229 WSCRRG*ARAPSSPPGWT*GEARSC*RGPVRYTRSSGPSCAAPCEHELRMGS 74
Score = 46.4 bits (95), Expect(3) = 6e-023
Identities = 19/54 (35%), Positives = 28/54 (51%)
Frame = +3 / +1
Query: 594 LGSFLFWFEAVRRVFDLEIINASKTPLLAAWAERFVGTVEAKEVVPLPTADMAV 755
+G L W +A R++F + + A + P+ WA+R T AKE VP M V
Sbjct: 526 VGCHLHWLKAQRKMFGVVFLEAGRNPVFTGWAKRVAKTDPAKEGVPTTDRGMVV 687
Score = 37.7 bits (76), Expect(2) = 1e-027
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = -3 / -2
Query: 423 KQLVVGVGSPEASSGALVGVGWEDR 349
+QLVV VG P+A GA+VGV EDR
Sbjct: 363 EQLVVRVGGPKAEGGAVVGVDGEDR 289
Score = 36.3 bits (73), Expect(3) = 6e-023
Identities = 16/24 (66%), Positives = 17/24 (70%)
Frame = +2 / +2
Query: 350 RSSQPTPTSAPLLASGLPTPTTSC 421
RSS TPT+AP A G PT TTSC
Sbjct: 290 RSSPSTPTTAPPSAFGPPTRTTSC 361
>gb|BJ548150.1|BJ548150 BJ548150 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal13b18 3', mRNA sequence
Length = 754
Score = 101 bits (215), Expect(3) = 1e-053
Identities = 38/53 (71%), Positives = 49/53 (92%)
Frame = +1 / -1
Query: 187 VSYEYVEEDISNKSELLLKSNPVHKKVPVLIHNGKPICESLVIMQYVDELFAG 345
+SYEY EED++NKS+LLL+SNPV+KKVPVLIHNG PICESL I++Y+DE++ G
Sbjct: 754 LSYEYQEEDLANKSDLLLESNPVNKKVPVLIHNGVPICESLAILEYIDEVYRG 596
Score = 92.3 bits (195), Expect(3) = 1e-053
Identities = 35/82 (42%), Positives = 45/82 (54%)
Frame = +1 / -1
Query: 343 GRPILPTDPYERATARFWAAYADDKLFPAWYGMVXXXXXXXXXXXXXXXXXXIEHMEVTF 522
G +LP DPY+RA ARFWAAY D L W+ M +E +EV
Sbjct: 592 GPCLLPGDPYQRAVARFWAAYIDQNLVAPWWKMFVGKTDKEKHEGTKQTLAAVEKLEVAL 413
Query: 523 AKCSGGNAFFGGDSIGYVDIVL 588
+CS G FFGGD++GY+D+VL
Sbjct: 412 RECSSGKPFFGGDNVGYIDVVL 347
Score = 55.6 bits (115), Expect(3) = 1e-053
Identities = 22/47 (46%), Positives = 30/47 (63%)
Frame = +3 / -1
Query: 591 VLGSFLFWFEAVRRVFDLEIINASKTPLLAAWAERFVGTVEAKEVVP 731
VLG + W + + LE+++A+KTPLL AW ERF G AK V+P
Sbjct: 352 VLGGMVAWMQGTEALCGLELLDATKTPLLLAWMERFGGMEPAKAVLP 212
>gb|BE421080.1|BE421080 HWM005.F01 ITEC HWM Barley Leaf Library Hordeum vulgare subsp.
vulgare cDNA clone HWM005.F01, mRNA sequence
Length = 953
Score = 131 bits (281), Expect(3) = 5e-053
Identities = 53/76 (69%), Positives = 65/76 (85%)
Frame = +1 / +3
Query: 118 LKVLGLQVSPFVLRVCLALNMKGVSYEYVEEDISNKSELLLKSNPVHKKVPVLIHNGKPI 297
LK+LG PF LRV LALN KG+SYEY EED++NKS+LLL+SNPV+KKVPVLIHNG PI
Sbjct: 372 LKLLGTWRGPFALRVRLALNFKGLSYEYQEEDLANKSDLLLESNPVNKKVPVLIHNGVPI 551
Query: 298 CESLVIMQYVDELFAG 345
CESL I++Y+DE++ G
Sbjct: 552 CESLAILEYIDEVYRG 599
Score = 89.5 bits (189), Expect(3) = 5e-053
Identities = 33/82 (40%), Positives = 45/82 (54%)
Frame = +1 / +3
Query: 343 GRPILPTDPYERATARFWAAYADDKLFPAWYGMVXXXXXXXXXXXXXXXXXXIEHMEVTF 522
G +LP DPY+RA ARFWAAY D L W+ M +E ++V
Sbjct: 603 GPCLLPGDPYQRAVARFWAAYIDQNLVAPWWKMFVGKTDKEKHEGTKQTLAAVEKLQVAL 782
Query: 523 AKCSGGNAFFGGDSIGYVDIVL 588
+CS G FFGGD++GY+D+V+
Sbjct: 783 RECSSGKPFFGGDNVGYIDVVV 848
Score = 25.8 bits (50), Expect(3) = 5e-053
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +3 / +2
Query: 663 KTPLLAAWAERF 698
+TPLL AW ERF
Sbjct: 914 QTPLLLAWMERF 949
>gb|BF621862.3|BF621862 HVSMEa0001C05f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0001C05f, mRNA sequence
Length = 595
Score = 153 bits (329), Expect(3) = 6e-053
Identities = 61/87 (70%), Positives = 76/87 (87%)
Frame = +1 / +1
Query: 85 LERETMAGKEGLKVLGLQVSPFVLRVCLALNMKGVSYEYVEEDISNKSELLLKSNPVHKK 264
+++ETMAG E LK+LG SPFV RV LAL++KG+S+E VEED+ NKSELLL SNPVHKK
Sbjct: 49 IKQETMAGGEDLKLLGAWASPFVTRVKLALSLKGLSFEDVEEDLGNKSELLLSSNPVHKK 228
Query: 265 VPVLIHNGKPICESLVIMQYVDELFAG 345
VPVL+HNGKP+CES++I+QY+DE FAG
Sbjct: 229 VPVLVHNGKPVCESVIILQYIDEAFAG 309
Score = 92.7 bits (196), Expect(2) = 1e-023
Identities = 42/82 (51%), Positives = 54/82 (65%)
Frame = -3 / -2
Query: 345 AGEQLVDVLHDDE*LADGLTVVDEHGHLLVHRVGLEQELTLVGYVLLDVLVTHSFHVQRQ 166
AGE+L+DVL DD *LA GL++V+EH HLLVH V E+EL LV VLLD+L + QR+
Sbjct: 309 AGERLIDVLKDDH*LAHGLSIVNEHWHLLVHWVRAEEELALVAQVLLDILEAQALEAQRK 130
Query: 165 AHAEHERAHLQAEDLKTLLARH 100
H +RA AE L+ + H
Sbjct: 129 LHPGDKRACPSAEQLQVFSSGH 64
Score = 56.5 bits (117), Expect(3) = 6e-053
Identities = 20/30 (66%), Positives = 23/30 (76%)
Frame = +1 / +1
Query: 343 GRPILPTDPYERATARFWAAYADDKLFPAW 432
G +LP+DPY+RA ARFWAAY DDKL W
Sbjct: 313 GPSLLPSDPYQRAVARFWAAYIDDKLVAPW 402
Score = 37.3 bits (75), Expect(2) = 1e-023
Identities = 19/36 (52%), Positives = 24/36 (66%)
Frame = -1 / -3
Query: 431 HAGNNLSSA*AAQKRAVARS*GSVGRIGRPANSSST 324
H +LSS *AAQKRA AR *GS GR P ++++
Sbjct: 401 HGATSLSSM*AAQKRATARW*GSEGRREGPMPANAS 294
Score = 36.8 bits (74), Expect(3) = 6e-053
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +1 / +1
Query: 499 IEHMEVTFAKCSGGNAFFGGDSIGYVDIVL 588
+E +E +CS G +FGG+++G VD+ L
Sbjct: 469 VEMLEGALRECSKGEGYFGGETVGLVDVSL 558
>gb|BM817225.1|BM817225 HC109B04_T3.ab1 HC Hordeum vulgare subsp. vulgare cDNA clone
HC109B04_T3.ab1 similar to Glutathione
transferase,Glycoprotein-fucosylgalactoside
alpha-galactosyltransferase,, mRNA sequence
Length = 897
Score = 138 bits (295), Expect(3) = 7e-052
Identities = 55/86 (63%), Positives = 71/86 (82%)
Frame = +1 / +2
Query: 88 ERETMAGKEGLKVLGLQVSPFVLRVCLALNMKGVSYEYVEEDISNKSELLLKSNPVHKKV 267
+R G + +K+LG+ SPFV+R LAL +KGV+YEYVEE+++NKS+L L+SNPVHK V
Sbjct: 86 KRMANRGGDEVKLLGMWASPFVVRAQLALRLKGVNYEYVEEELANKSDLFLRSNPVHKTV 265
Query: 268 PVLIHNGKPICESLVIMQYVDELFAG 345
PVLIH+GKPICES VI+QY+DE FAG
Sbjct: 266 PVLIHDGKPICESQVILQYIDEAFAG 343
Score = 101 bits (216), Expect(2) = 8e-029
Identities = 45/75 (60%), Positives = 55/75 (73%)
Frame = -3 / -3
Query: 345 AGEQLVDVLHDDE*LADGLTVVDEHGHLLVHRVGLEQELTLVGYVLLDVLVTHSFHVQRQ 166
AGE LVDVL DD LADGL VVDEHG+ LV+RVG E+E+ LVG +LLDVLV H+ +R+
Sbjct: 343 AGEGLVDVLQDDLGLADGLAVVDEHGNRLVYRVGAEEEVALVGELLLDVLVVHALEAERE 164
Query: 165 AHAEHERAHLQAEDL 121
+HERA A+ L
Sbjct: 163 LCPDHERARPHAQQL 119
Score = 78.5 bits (165), Expect(2) = 3e-021
Identities = 37/85 (43%), Positives = 41/85 (48%)
Frame = -1 / -1
Query: 344 PANSSSTYCMMTSDSQMGLPLWMSTGTFLCTGXXXXXXXXXXXXXXXXXXXLTPFMFSAK 165
PA +SS YC MT DSQMGLP WMSTGT LCTG TP SA
Sbjct: 342 PAKASSMYCRMTWDSQMGLPSWMSTGTVLCTGLERRKRSLLLASSSSTYS*FTPLRRSAS 163
Query: 164 HTRSTNGLTCRPRTLRPSLPAIVSL 90
+TNGL P + S P + L
Sbjct: 162 CALTTNGLAHMPSSFTSSPPLLAIL 88
Score = 60.2 bits (125), Expect(3) = 7e-052
Identities = 21/30 (70%), Positives = 23/30 (76%)
Frame = +1 / +2
Query: 343 GRPILPTDPYERATARFWAAYADDKLFPAW 432
G +LP DPYERA ARFWAAY +DKL P W
Sbjct: 347 GPSLLPADPYERAVARFWAAYVEDKLLPPW 436
Score = 45.5 bits (93), Expect(2) = 8e-029
Identities = 21/36 (58%), Positives = 26/36 (72%)
Frame = -1 / -1
Query: 431 HAGNNLSSA*AAQKRAVARS*GSVGRIGRPANSSST 324
H G++LSS *AAQKRA ARS*GS GR P + ++
Sbjct: 435 HGGSSLSST*AAQKRATARS*GSAGRRDGPTPAKAS 328
Score = 45.1 bits (92), Expect(3) = 7e-052
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +1 / +2
Query: 499 IEHMEVTFAKCSGGNAFFGGDSIGYVDIVLTCSAPSCSGSRRCAG 633
++ +E +CS G FFGGD +GYVD++L P + + +G
Sbjct: 503 VDTLEEGLRQCSEGKGFFGGDCVGYVDVLLGSIVPWVRATEKLSG 637
Score = 43.7 bits (89), Expect(2) = 3e-021
Identities = 18/30 (60%), Positives = 21/30 (70%)
Frame = -3 / -3
Query: 441 HAVPRWKQLVVGVGSPEASSGALVGVGWED 352
H PR +QLV VG PEA GALVG+G E+
Sbjct: 445 HLPPRREQLVFDVGGPEARDGALVGIGGEE 356
>gb|BE214207.2|BE214207 HV_CEb0002K18f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0002K18f, mRNA sequence
Length = 717
Score = 135 bits (290), Expect(3) = 7e-052
Identities = 56/80 (70%), Positives = 67/80 (83%)
Frame = +1 / +3
Query: 100 MAGKEGLKVLGLQVSPFVLRVCLALNMKGVSYEYVEEDISNKSELLLKSNPVHKKVPVLI 279
+AG LK+LGL VSPFV RV LAL+MKGV YEY+E D+ +K ELLL+ NPVHKKVPVLI
Sbjct: 6 LAGDGDLKLLGLMVSPFVTRVRLALHMKGVGYEYIETDVLDKGELLLRYNPVHKKVPVLI 185
Query: 280 HNGKPICESLVIMQYVDELF 339
HNG P+CES VI+QYVDE++
Sbjct: 186 HNGVPLCESQVIVQYVDEVW 245
Score = 112 bits (239), Expect(3) = 6e-032
Identities = 51/89 (57%), Positives = 59/89 (66%)
Frame = -3 / -2
Query: 363 GWEDRPAGEQLVDVLHDDE*LADGLTVVDEHGHLLVHRVGLEQELTLVGYVLLDVLVTHS 184
G + G LVDVLHDD LA+ VVDEHGHLLVHRV E+EL LV +V LDVLV H+
Sbjct: 269 GEDGGAGGPDLVDVLHDDLRLAERHAVVDEHGHLLVHRVVAEEELALVQHVRLDVLVAHA 90
Query: 183 FHVQRQAHAEHERAHLQAEDLKTLLARHC 97
HVQRQ A HERAH Q + L+ + C
Sbjct: 89 LHVQRQPDAGHERAHHQPQQLQVSVPGQC 3
Score = 80.3 bits (169), Expect(3) = 7e-052
Identities = 31/67 (46%), Positives = 36/67 (53%)
Frame = +1 / +3
Query: 340 AGRPILPTDPYERATARFWAAYADDKLFPAWYGMVXXXXXXXXXXXXXXXXXXIEHMEVT 519
AG PILP DPY RATAR WAAY DDKLFPAW G++ + +EV
Sbjct: 249 AGAPILPADPYARATARLWAAYVDDKLFPAWLGILLAPTEAARAEKVDATLAALAQLEVA 428
Query: 520 FAKCSGG 540
+C G
Sbjct: 429 AGECPDG 449
Score = 66.6 bits (139), Expect(3) = 2e-030
Identities = 31/72 (43%), Positives = 36/72 (50%)
Frame = -1 / -3
Query: 539 PPEHLAKVTSMCXXXXXXXXXXXXXXXXXXXFTMPYHAGNNLSSA*AAQKRAVARS*GSV 360
P H TS C MP AGN+LSS *AA KRAVAR+*GS
Sbjct: 448 PSGHSPAATSSCASAASVASTFSALAASVGARRMPSQAGNSLSST*AAHKRAVARA*GSA 269
Query: 359 GRIGRPANSSST 324
GR+G PA +S+
Sbjct: 268 GRMGAPAGQTSS 233
Score = 64.3 bits (134), Expect(3) = 2e-030
Identities = 24/29 (82%), Positives = 25/29 (86%)
Frame = -1 / -3
Query: 335 SSSTYCMMTSDSQMGLPLWMSTGTFLCTG 249
+SSTYC MT DSQ G PLWMSTGTFLCTG
Sbjct: 241 TSSTYCTMTCDSQSGTPLWMSTGTFLCTG 155
Score = 40.0 bits (81), Expect(3) = 2e-030
Identities = 17/29 (58%), Positives = 18/29 (62%)
Frame = -1 / -3
Query: 188 TPFMFSAKHTRSTNGLTCRPRTLRPSLPA 102
TPFM SA TR TNGLT P + R PA
Sbjct: 94 TPFMCSASRTRVTNGLTINPSSFRSPSPA 8
Score = 38.6 bits (78), Expect(3) = 6e-032
Identities = 19/31 (61%), Positives = 20/31 (64%)
Frame = -3 / -2
Query: 432 PRWKQLVVGVGSPEASSGALVGVGWEDRPAG 340
P +QLVV VG P A GA VGVG ED AG
Sbjct: 341 PGGEQLVVDVGGP*AGGGAGVGVGGEDGGAG 249
Score = 27.2 bits (53), Expect(3) = 7e-052
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +1 / +3
Query: 535 GGNAFFGGDSIGYVDI 582
G FGGDSIG++D+
Sbjct: 450 GRRPLFGGDSIGFLDL 497
Score = 24.9 bits (48), Expect(3) = 6e-032
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = -1 / -3
Query: 569 PMESPPKKALPP 534
PMESPP K L P
Sbjct: 484 PMESPPNKGLLP 449
>gb|BF629286.3|BF629286 HVSMEb0010K15f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0010K15f, mRNA sequence
Length = 749
Score = 153 bits (329), Expect(3) = 9e-052
Identities = 61/87 (70%), Positives = 76/87 (87%)
Frame = +1 / +1
Query: 85 LERETMAGKEGLKVLGLQVSPFVLRVCLALNMKGVSYEYVEEDISNKSELLLKSNPVHKK 264
+++ETMAG E LK+LG SPFV RV LAL++KG+S+E VEED+ NKSELLL SNPVHKK
Sbjct: 49 IKQETMAGGEDLKLLGAWASPFVTRVKLALSLKGLSFEDVEEDLGNKSELLLSSNPVHKK 228
Query: 265 VPVLIHNGKPICESLVIMQYVDELFAG 345
VPVL+HNGKP+CES++I+QY+DE FAG
Sbjct: 229 VPVLVHNGKPVCESVIILQYIDEAFAG 309
Score = 92.7 bits (196), Expect(2) = 1e-023
Identities = 42/82 (51%), Positives = 54/82 (65%)
Frame = -3 / -3
Query: 345 AGEQLVDVLHDDE*LADGLTVVDEHGHLLVHRVGLEQELTLVGYVLLDVLVTHSFHVQRQ 166
AGE+L+DVL DD *LA GL++V+EH HLLVH V E+EL LV VLLD+L + QR+
Sbjct: 309 AGERLIDVLKDDH*LAHGLSIVNEHWHLLVHWVRAEEELALVAQVLLDILEAQALEAQRK 130
Query: 165 AHAEHERAHLQAEDLKTLLARH 100
H +RA AE L+ + H
Sbjct: 129 LHPGDKRACPSAEQLQVFSSGH 64
Score = 56.5 bits (117), Expect(3) = 9e-052
Identities = 20/30 (66%), Positives = 23/30 (76%)
Frame = +1 / +1
Query: 343 GRPILPTDPYERATARFWAAYADDKLFPAW 432
G +LP+DPY+RA ARFWAAY DDKL W
Sbjct: 313 GPSLLPSDPYQRAVARFWAAYIDDKLVAPW 402
Score = 37.3 bits (75), Expect(2) = 1e-023
Identities = 19/36 (52%), Positives = 24/36 (66%)
Frame = -1 / -1
Query: 431 HAGNNLSSA*AAQKRAVARS*GSVGRIGRPANSSST 324
H +LSS *AAQKRA AR *GS GR P ++++
Sbjct: 401 HGATSLSSM*AAQKRATARW*GSEGRREGPMPANAS 294
Score = 32.7 bits (65), Expect(3) = 9e-052
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +1 / +1
Query: 499 IEHMEVTFAKCSGGNAFFGGDSIGYVDIVL 588
+E +E +CS G +FGG++ G VD+ L
Sbjct: 469 VEMLEGALRECSKGKGYFGGETGGPVDVSL 558
>gb|BE421272.1|BE421272 HWM007.F01 ITEC HWM Barley Leaf Library Hordeum vulgare subsp.
vulgare cDNA clone HWM007.F01, mRNA sequence
Length = 734
Score = 131 bits (281), Expect(2) = 9e-052
Identities = 53/76 (69%), Positives = 65/76 (85%)
Frame = +1 / +2
Query: 118 LKVLGLQVSPFVLRVCLALNMKGVSYEYVEEDISNKSELLLKSNPVHKKVPVLIHNGKPI 297
LK+LG PF LRV LALN KG+SYEY EED++NKS+LLL+SNPV+KKVPVLIHNG PI
Sbjct: 134 LKLLGTWRGPFALRVRLALNFKGLSYEYQEEDLANKSDLLLESNPVNKKVPVLIHNGVPI 313
Query: 298 CESLVIMQYVDELFAG 345
CESL I++Y+DE++ G
Sbjct: 314 CESLAILEYIDEVYRG 361
Score = 92.7 bits (196), Expect(2) = 9e-052
Identities = 37/97 (38%), Positives = 48/97 (49%)
Frame = +1 / +2
Query: 343 GRPILPTDPYERATARFWAAYADDKLFPAWYGMVXXXXXXXXXXXXXXXXXXIEHMEVTF 522
G +LP DPY+RA ARFWAAY D L W+ M +E +EV
Sbjct: 365 GPCLLPGDPYQRAVARFWAAYIDQNLVAPWWKMFVGKTDKEKHEGTKQTLAAVEKLEVAL 544
Query: 523 AKCSGGNAFFGGDSIGYVDIVLTCSAPSCSGSRRCAG 633
+CS G FGGD++GY+D+VL P G+ G
Sbjct: 545 RECSSGKPVFGGDNVGYIDVVLGGMVPWMQGTEALCG 655
Score = 82.6 bits (174), Expect(3) = 5e-021
Identities = 37/63 (58%), Positives = 48/63 (76%)
Frame = -3 / -2
Query: 333 LVDVLHDDE*LADGLTVVDEHGHLLVHRVGLEQELTLVGYVLLDVLVTHSFHVQRQAHAE 154
LVDVL D E*LA+ +VDE+GHLLVHR+GL +++TLVG VL VLV +F V+R H++
Sbjct: 349 LVDVLQDGE*LANWHAIVDENGHLLVHRIGL*KKVTLVGKVLFLVLVAQAFEVER*PHSQ 170
Query: 153 HER 145
ER
Sbjct: 169 RER 161
Score = 30.9 bits (61), Expect(3) = 5e-021
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = -2 / -3
Query: 715 ASTVPTNRSAHAANSGVLLALMISRSKT 632
A ++P RS HA+++GVL+A SR ++
Sbjct: 729 AGSIPPKRSIHASSTGVLVASRSSRPQS 646
Score = 29.5 bits (58), Expect(3) = 5e-021
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -3 / -2
Query: 441 HAVPRWKQLVVGVGSPEASSGALVGVGWE 355
H P +++ VG PE S G LVGV E
Sbjct: 463 HLPPWRD*ILINVGGPEPSDGTLVGVARE 377
>gb|BM375338.2|BM375338 EBem06_SQ003_A18_R embryo, 21 DPA, no treatment, cv Optic, EBem06
Hordeum vulgare subsp. vulgare cDNA clone
EBem06_SQ003_A18 5', mRNA sequence
Length = 480
Score = 139 bits (298), Expect(2) = 2e-051
Identities = 58/82 (70%), Positives = 68/82 (82%)
Frame = +1 / +2
Query: 94 ETMAGKEGLKVLGLQVSPFVLRVCLALNMKGVSYEYVEEDISNKSELLLKSNPVHKKVPV 273
E MAG LK+LGL VSPFV RV LAL+MKGV YEY+E D+ +K ELLL+ NPVHKKVPV
Sbjct: 14 EAMAGDGDLKLLGLMVSPFVTRVRLALHMKGVGYEYIETDVLDKGELLLRYNPVHKKVPV 193
Query: 274 LIHNGKPICESLVIMQYVDELF 339
LIHNG P+CES VI+QYVDE++
Sbjct: 194 LIHNGVPLCESQVIVQYVDEVW 259
Score = 119 bits (255), Expect(2) = 3e-033
Identities = 53/90 (58%), Positives = 62/90 (68%)
Frame = -3 / -3
Query: 363 GWEDRPAGEQLVDVLHDDE*LADGLTVVDEHGHLLVHRVGLEQELTLVGYVLLDVLVTHS 184
G + G LVDVLHDD LA+ VVDEHGHLLVHRV E+EL LV +V LDVLV H+
Sbjct: 283 GEDGGAGGPDLVDVLHDDLRLAERHAVVDEHGHLLVHRVVAEEELALVQHVRLDVLVAHA 104
Query: 183 FHVQRQAHAEHERAHLQAEDLKTLLARHCF 94
HVQRQ A HERAH Q + L+ ++ HCF
Sbjct: 103 LHVQRQPDAGHERAHHQPQQLQVSVSGHCF 14
Score = 84.0 bits (177), Expect(2) = 2e-051
Identities = 34/67 (50%), Positives = 39/67 (58%)
Frame = +1 / +2
Query: 340 AGRPILPTDPYERATARFWAAYADDKLFPAWYGMVXXXXXXXXXXXXXXXXXXIEHMEVT 519
AG PILP DPY RATARFWAAY DDKLFPAW G++ + +EV
Sbjct: 263 AGAPILPADPYARATARFWAAYVDDKLFPAWLGILLAPTEAARAEKVDXTLAALAQLEVA 442
Query: 520 FAKCSGG 540
A+C G
Sbjct: 443 AAECLDG 463
Score = 71.6 bits (150), Expect(3) = 5e-033
Identities = 34/72 (47%), Positives = 39/72 (54%)
Frame = -1 / -1
Query: 539 PPEHLAKVTSMCXXXXXXXXXXXXXXXXXXXFTMPYHAGNNLSSA*AAQKRAVARS*GSV 360
P H A TS C MP AGN+LSS *AAQKRAVAR+*GS
Sbjct: 462 PSRHSAAATSSCASAASVXSTFSALAASVGARRMPSQAGNSLSST*AAQKRAVARA*GSA 283
Query: 359 GRIGRPANSSST 324
GR+G PA +S+
Sbjct: 282 GRMGAPAGQTSS 247
Score = 64.3 bits (134), Expect(3) = 5e-033
Identities = 24/29 (82%), Positives = 25/29 (86%)
Frame = -1 / -1
Query: 335 SSSTYCMMTSDSQMGLPLWMSTGTFLCTG 249
+SSTYC MT DSQ G PLWMSTGTFLCTG
Sbjct: 255 TSSTYCTMTCDSQSGTPLWMSTGTFLCTG 169
Score = 43.7 bits (89), Expect(3) = 5e-033
Identities = 19/32 (59%), Positives = 20/32 (62%)
Frame = -1 / -1
Query: 188 TPFMFSAKHTRSTNGLTCRPRTLRPSLPAIVS 93
TPFM SA TR TNGLT P + R PAI S
Sbjct: 108 TPFMCSASRTRVTNGLTINPSSFRSPSPAIAS 13
Score = 42.8 bits (87), Expect(2) = 3e-033
Identities = 20/31 (64%), Positives = 21/31 (67%)
Frame = -3 / -3
Query: 432 PRWKQLVVGVGSPEASSGALVGVGWEDRPAG 340
P +QLVV VG PEA GA VGVG ED AG
Sbjct: 355 PGGEQLVVDVGGPEAGGGAGVGVGGEDGGAG 263
>gb|BF622591.2|BF622591 HVSMEa0007C21f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0007C21f, mRNA sequence
Length = 694
Score = 141 bits (303), Expect(4) = 3e-051
Identities = 57/81 (70%), Positives = 71/81 (87%)
Frame = +1 / +3
Query: 100 MAGKEGLKVLGLQVSPFVLRVCLALNMKGVSYEYVEEDISNKSELLLKSNPVHKKVPVLI 279
MAG + LK+LG SPFV RV LAL +KG+SYE VEE++SNKSELLLKSNPVHKK+PVLI
Sbjct: 84 MAGGDDLKLLGAWPSPFVTRVKLALALKGLSYEDVEENLSNKSELLLKSNPVHKKIPVLI 263
Query: 280 HNGKPICESLVIMQYVDELFA 342
HNG P+CES++I+QY+D++FA
Sbjct: 264 HNGSPVCESMIIVQYIDDVFA 326
Score = 101 bits (216), Expect(2) = 6e-026
Identities = 47/82 (57%), Positives = 58/82 (70%)
Frame = -3 / -3
Query: 345 AGEQLVDVLHDDE*LADGLTVVDEHGHLLVHRVGLEQELTLVGYVLLDVLVTHSFHVQRQ 166
AGE +VDVLHDD LA VVDEHG+LLVHRVGLE+EL LVG VLL VLV + +R+
Sbjct: 329 AGEDVVDVLHDDHGLAYRGAVVDEHGYLLVHRVGLEEELALVGQVLLHVLVAQALQGERE 150
Query: 165 AHAEHERAHLQAEDLKTLLARH 100
H+ +ERA AE L+ + + H
Sbjct: 149 LHSGNERAWPCAEQLQVISSGH 84
Score = 51.9 bits (107), Expect(4) = 3e-051
Identities = 19/30 (63%), Positives = 20/30 (66%)
Frame = +1 / +3
Query: 343 GRPILPTDPYERATARFWAAYADDKLFPAW 432
G +L DPYERA ARFW AY DDKL W
Sbjct: 333 GPSLLSEDPYERAVARFWVAYVDDKLVAPW 422
Score = 39.1 bits (79), Expect(4) = 3e-051
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +1 / +3
Query: 499 IEHMEVTFAKCSGGNAFFGGDSIGYVDIVL 588
+E +E +CS G FFGGD +G VD+ L
Sbjct: 489 VEVLEGALRECSKGGDFFGGDGVGLVDVAL 578
Score = 35.9 bits (72), Expect(2) = 6e-026
Identities = 18/30 (60%), Positives = 19/30 (63%)
Frame = -1 / -1
Query: 431 HAGNNLSSA*AAQKRAVARS*GSVGRIGRP 342
H +LSS *A QKRA ARS*GS R P
Sbjct: 421 HGATSLSST*ATQKRATARS*GSSDRRDGP 332
Score = 26.3 bits (51), Expect(4) = 3e-051
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +3 / +1
Query: 645 EIINASKTPLLAAWAER 695
+I + KTPLLA W ER
Sbjct: 628 KIFDPVKTPLLALWEER 678
>gb|BF257478.2|BF257478 HVSMEf0013A10f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0013A10f, mRNA sequence
Length = 493
Score = 134 bits (287), Expect(2) = 6e-051
Identities = 55/85 (64%), Positives = 72/85 (84%)
Frame = +1 / +1
Query: 88 ERETMAGKEGLKVLGLQVSPFVLRVCLALNMKGVSYEYVEEDISNKSELLLKSNPVHKKV 267
++ MA + LK+LGL VSPFV+RV +AL+MKG+SYEY+E+D+ NKSELLLKSNPV KKV
Sbjct: 7 QKTAMAAEGDLKLLGLSVSPFVVRVRMALHMKGLSYEYIEQDLFNKSELLLKSNPVEKKV 186
Query: 268 PVLIHNGKPICESLVIMQYVDELFA 342
PVLIH+GK I +S I+QY+DE++A
Sbjct: 187 PVLIHDGKTILDSSAIVQYIDEVWA 261
Score = 104 bits (222), Expect(2) = 3e-027
Identities = 46/87 (52%), Positives = 57/87 (65%)
Frame = -3 / -2
Query: 342 GEQLVDVLHDDE*LADGLTVVDEHGHLLVHRVGLEQELTLVGYVLLDVLVTHSFHVQRQA 163
G VDVLHD + GL VVDEHGHLL+HRVGLE++L LV VL D+LV + HVQR A
Sbjct: 261 GPDFVDVLHDGRRIEYGLAVVDEHGHLLLHRVGLEEKLALVEEVLFDILVAQALHVQRHA 82
Query: 162 HAEHERAHLQAEDLKTLLARHCFPLQI 82
+ +E AH QA L+ + HC L +
Sbjct: 81 NTNYEWAH*QA*QLQVSFSCHCCLLSL 1
Score = 87.2 bits (184), Expect(2) = 6e-051
Identities = 36/75 (48%), Positives = 43/75 (57%)
Frame = +1 / +1
Query: 343 GRPILPTDPYERATARFWAAYADDKLFPAWYGMVXXXXXXXXXXXXXXXXXXIEHMEVTF 522
G ILP DPY+RA +RFWAAYADDKLF A+ G+ +E +E F
Sbjct: 268 GPSILPVDPYDRAASRFWAAYADDKLFSAYVGINRATTKVERAEKVSETVAVLERLEEAF 447
Query: 523 AKCSGGNAFFGGDSI 567
AK S G AFF GDS+
Sbjct: 448 AKQSNGKAFFAGDSV 492
Score = 60.6 bits (126), Expect(2) = 7e-021
Identities = 29/52 (55%), Positives = 32/52 (61%)
Frame = -2 / -1
Query: 295 WAYRCG*ARAPSCAPGWT*AGAHSCWICPPRRTRNSLLSCSAPSTRGARTGS 140
W+ R G*ARAPS PGWT* A SC P R TR+S SC+AP R GS
Sbjct: 214 WSCRRG*ARAPSSPPGWT*GEARSC*RGPVRYTRSSGPSCAAPCEHELRMGS 59
Score = 60.2 bits (125), Expect(2) = 7e-021
Identities = 35/94 (37%), Positives = 43/94 (45%)
Frame = -1 / -3
Query: 563 ESPPKKALPPEHLAKVTSMCXXXXXXXXXXXXXXXXXXXFTMPYHAGNNLSSA*AAQKRA 384
ESP K A P + LA +S MP A N+LSSA*AAQKR
Sbjct: 488 ESPAKNAFPFDCLANASSSRSSTATVSLTFSALSTFVVALLMPT*AENSLSSA*AAQKRE 309
Query: 383 VARS*GSVGRIGRPANSSSTYCMMTSDSQMGLPL 282
ARS*GS GRI P + ++ T + + L
Sbjct: 308 AARS*GSTGRIDGPMAAQTSSMYCTMADESSMVL 207
Score = 37.7 bits (76), Expect(2) = 3e-027
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = -3 / -2
Query: 423 KQLVVGVGSPEASSGALVGVGWEDR 349
+QLVV VG P+A GA+VGV EDR
Sbjct: 348 EQLVVRVGGPKAGGGAVVGVDGEDR 274
>gb|BG299731.1|BG299731 HVSMEa0021J09f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0021J09f, mRNA sequence
Length = 569
Score = 153 bits (329), Expect(3) = 3e-050
Identities = 61/87 (70%), Positives = 76/87 (87%)
Frame = +1 / +2
Query: 85 LERETMAGKEGLKVLGLQVSPFVLRVCLALNMKGVSYEYVEEDISNKSELLLKSNPVHKK 264
+++ETMAG E LK+LG SPFV RV LAL++KG+S+E VEED+ NKSELLL SNPVHKK
Sbjct: 38 IKQETMAGGEDLKLLGAWASPFVTRVKLALSLKGLSFEDVEEDLGNKSELLLSSNPVHKK 217
Query: 265 VPVLIHNGKPICESLVIMQYVDELFAG 345
VPVL+HNGKP+CES++I+QY+DE FAG
Sbjct: 218 VPVLVHNGKPVCESVIILQYIDEAFAG 298
Score = 92.7 bits (196), Expect(2) = 1e-023
Identities = 42/82 (51%), Positives = 54/82 (65%)
Frame = -3 / -2
Query: 345 AGEQLVDVLHDDE*LADGLTVVDEHGHLLVHRVGLEQELTLVGYVLLDVLVTHSFHVQRQ 166
AGE+L+DVL DD *LA GL++V+EH HLLVH V E+EL LV VLLD+L + QR+
Sbjct: 298 AGERLIDVLKDDH*LAHGLSIVNEHWHLLVHWVRAEEELALVAQVLLDILEAQALEAQRK 119
Query: 165 AHAEHERAHLQAEDLKTLLARH 100
H +RA AE L+ + H
Sbjct: 118 LHPGDKRACPSAEQLQVFSSGH 53
Score = 56.5 bits (117), Expect(3) = 3e-050
Identities = 20/30 (66%), Positives = 23/30 (76%)
Frame = +1 / +2
Query: 343 GRPILPTDPYERATARFWAAYADDKLFPAW 432
G +LP+DPY+RA ARFWAAY DDKL W
Sbjct: 302 GPSLLPSDPYQRAVARFWAAYIDDKLVAPW 391
Score = 37.3 bits (75), Expect(2) = 1e-023
Identities = 19/36 (52%), Positives = 24/36 (66%)
Frame = -1 / -3
Query: 431 HAGNNLSSA*AAQKRAVARS*GSVGRIGRPANSSST 324
H +LSS *AAQKRA AR *GS GR P ++++
Sbjct: 390 HGATSLSSM*AAQKRATARW*GSEGRREGPMPANAS 283
Score = 27.6 bits (54), Expect(3) = 3e-050
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +1 / +2
Query: 499 IEHMEVTFAKCSGGNAFFGGDSIGYVDIVL 588
+E +E +CS G +FGG++ D+ L
Sbjct: 458 VEXVEGALRECSKGEGYFGGENRRTCDVSL 547
>gb|BQ466487.1|BQ466487 HT02K21r HT Hordeum vulgare subsp. vulgare cDNA clone HT02K21
5-PRIME, mRNA sequence
Length = 535
Score = 153 bits (329), Expect(3) = 2e-049
Identities = 61/87 (70%), Positives = 76/87 (87%)
Frame = +1 / +1
Query: 85 LERETMAGKEGLKVLGLQVSPFVLRVCLALNMKGVSYEYVEEDISNKSELLLKSNPVHKK 264
+++ETMAG E LK+LG SPFV RV LAL++KG+S+E VEED+ NKSELLL SNPVHKK
Sbjct: 55 IKQETMAGGEDLKLLGAWASPFVTRVKLALSLKGLSFEDVEEDLGNKSELLLSSNPVHKK 234
Query: 265 VPVLIHNGKPICESLVIMQYVDELFAG 345
VPVL+HNGKP+CES++I+QY+DE FAG
Sbjct: 235 VPVLVHNGKPVCESVIILQYIDEAFAG 315
Score = 92.7 bits (196), Expect(2) = 1e-023
Identities = 42/82 (51%), Positives = 54/82 (65%)
Frame = -3 / -2
Query: 345 AGEQLVDVLHDDE*LADGLTVVDEHGHLLVHRVGLEQELTLVGYVLLDVLVTHSFHVQRQ 166
AGE+L+DVL DD *LA GL++V+EH HLLVH V E+EL LV VLLD+L + QR+
Sbjct: 315 AGERLIDVLKDDH*LAHGLSIVNEHWHLLVHWVRAEEELALVAQVLLDILEAQALEAQRK 136
Query: 165 AHAEHERAHLQAEDLKTLLARH 100
H +RA AE L+ + H
Sbjct: 135 LHPGDKRACPSAEQLQVFSSGH 70
Score = 56.5 bits (117), Expect(3) = 2e-049
Identities = 20/30 (66%), Positives = 23/30 (76%)
Frame = +1 / +1
Query: 343 GRPILPTDPYERATARFWAAYADDKLFPAW 432
G +LP+DPY+RA ARFWAAY DDKL W
Sbjct: 319 GPSLLPSDPYQRAVARFWAAYIDDKLVAPW 408
Score = 37.3 bits (75), Expect(2) = 1e-023
Identities = 19/36 (52%), Positives = 24/36 (66%)
Frame = -1 / -3
Query: 431 HAGNNLSSA*AAQKRAVARS*GSVGRIGRPANSSST 324
H +LSS *AAQKRA AR *GS GR P ++++
Sbjct: 407 HGATSLSSM*AAQKRATARW*GSEGRREGPMPANAS 300
Score = 24.9 bits (48), Expect(3) = 2e-049
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +1 / +1
Query: 499 IEHMEVTFAKCSGGNAFFGG 558
+E +E +CS G +FGG
Sbjct: 475 VEMLEGALRECSKGEGYFGG 534
>gb|BQ471126.1|BQ471126 HV01D06T HV Hordeum vulgare subsp. vulgare cDNA clone HV01D06
5-PRIME, mRNA sequence
Length = 629
Score = 127 bits (272), Expect(3) = 3e-049
Identities = 51/75 (68%), Positives = 64/75 (85%)
Frame = +1 / +3
Query: 121 KVLGLQVSPFVLRVCLALNMKGVSYEYVEEDISNKSELLLKSNPVHKKVPVLIHNGKPIC 300
K+LG SPFV+R LAL+ KG+S+E VEED++NKSELLL+SNP KKVPVLIHNGKP+C
Sbjct: 90 KLLGTFASPFVMRAKLALSFKGLSFEDVEEDLANKSELLLESNPAQKKVPVLIHNGKPVC 269
Query: 301 ESLVIMQYVDELFAG 345
+S VI+QY+DE F+G
Sbjct: 270 DSQVIVQYIDEAFSG 314
Score = 97.7 bits (207), Expect(2) = 4e-028
Identities = 43/80 (53%), Positives = 57/80 (71%)
Frame = -3 / -1
Query: 345 AGEQLVDVLHDDE*LADGLTVVDEHGHLLVHRVGLEQELTLVGYVLLDVLVTHSFHVQRQ 166
A E LVDVLHDD +ADGL V+DEHGHLL+ RVGLE+E LVG VLLDVL + +R+
Sbjct: 314 AAEGLVDVLHDDLRVADGLAVMDEHGHLLLRRVGLEEEFALVGEVLLDVLEAQALEAERE 135
Query: 165 AHAEHERAHLQAEDLKTLLA 106
+ ERA +A+ L+ +++
Sbjct: 134 LRSHDERAGERAQ*LRLIVS 75
Score = 59.7 bits (124), Expect(3) = 3e-049
Identities = 21/30 (70%), Positives = 23/30 (76%)
Frame = +1 / +3
Query: 343 GRPILPTDPYERATARFWAAYADDKLFPAW 432
G +LP DPYERA ARFWAAY DDKL +W
Sbjct: 318 GTSLLPADPYERAVARFWAAYVDDKLLASW 407
Score = 47.3 bits (97), Expect(3) = 3e-049
Identities = 16/30 (53%), Positives = 20/30 (66%)
Frame = +1 / +1
Query: 499 IEHMEVTFAKCSGGNAFFGGDSIGYVDIVL 588
+E ME F CS G FFGGD +GY+D+ L
Sbjct: 475 VETMEAAFKACSNGKPFFGGDRVGYLDVTL 564
Score = 47.3 bits (97), Expect(2) = 4e-028
Identities = 20/28 (71%), Positives = 23/28 (82%)
Frame = -3 / -1
Query: 432 PRWKQLVVGVGSPEASSGALVGVGWEDR 349
PR ++LVV VG PEAS GALVGVG E+R
Sbjct: 407 PRRQELVVDVGGPEASDGALVGVGGEER 324
>gb|BM816911.1|BM816911 HB106C10_SK.ab1 HB Hordeum vulgare subsp. vulgare cDNA clone
HB106C10_SK.ab1 similar to Glutathione
transferase,Glycoprotein-fucosylgalactoside
alpha-galactosyltransferase,, mRNA sequence
Length = 924
Score = 113 bits (241), Expect(4) = 6e-049
Identities = 46/89 (51%), Positives = 65/89 (73%)
Frame = +1 / +2
Query: 76 KIYLERETMAGKEGLKVLGLQVSPFVLRVCLALNMKGVSYEYVEEDISNKSELLLKSNPV 255
++ + E ++VLG SPFV+RV +AL +KGV +E VEE + NKSELLL SNPV
Sbjct: 59 ELNMSSEKQETTAAVRVLGRWPSPFVIRVLIALGLKGVDHELVEEAMGNKSELLLASNPV 238
Query: 256 HKKVPVLIHNGKPICESLVIMQYVDELFA 342
HK +PVL+H+G+P+ ESL+I+QYV E ++
Sbjct: 239 HKMIPVLLHHGRPVSESLIIVQYVHEAWS 325
Score = 78.5 bits (165), Expect(4) = 1e-025
Identities = 38/72 (52%), Positives = 44/72 (61%)
Frame = -3 / -3
Query: 342 GEQLVDVLHDDE*LADGLTVVDEHGHLLVHRVGLEQELTLVGYVLLDVLVTHSFHVQRQA 163
G LVDVL DDE L DG VV EHG LVHRVG EQ+L LV + LL LV + +
Sbjct: 325 GPGLVDVLDDDEGLGDGPAVVQEHGDHLVHRVGGEQQLALVAHRLLHELVVDALEPKGYQ 146
Query: 162 HAEHERAHLQAE 127
H +HERA A+
Sbjct: 145 HPDHERARPSAQ 110
Score = 48.3 bits (99), Expect(4) = 6e-049
Identities = 18/35 (51%), Positives = 25/35 (71%)
Frame = +3 / +2
Query: 594 LGSFLFWFEAVRRVFDLEIINASKTPLLAAWAERF 698
LGS L W AV R+ +L +++ +K P LAAWA+RF
Sbjct: 572 LGSHLGWIXAVERIAELRLLDEAKVPKLAAWADRF 676
Score = 45.5 bits (93), Expect(4) = 6e-049
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +1 / +2
Query: 499 IEHMEVTFAKCSGGNAFFGGDSIGYVDIVL 588
++ +EV +C GG +FGGD +GY+DI L
Sbjct: 485 LQRLEVALVECGGGKDYFGGDGVGYLDIAL 574
Score = 44.1 bits (90), Expect(4) = 6e-049
Identities = 15/22 (68%), Positives = 17/22 (77%)
Frame = +1 / +2
Query: 352 ILPTDPYERATARFWAAYADDK 417
+LP+DPY RA RFWA Y DDK
Sbjct: 341 LLPSDPYARAAERFWAQYVDDK 406
Score = 33.6 bits (67), Expect(4) = 1e-025
Identities = 14/24 (58%), Positives = 15/24 (62%)
Frame = -1 / -1
Query: 581 MST*PMESPPKKALPPEHLAKVTS 510
MS *P SPPK + PP H K TS
Sbjct: 567 MSR*PTPSPPK*SFPPPHSTKATS 496
Score = 30.9 bits (61), Expect(4) = 1e-025
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = -1 / -3
Query: 698 KPLRPRSQQRSLASVNDLQVENPAHRLEPEQ 606
+P+RPR Q R+L V + +P H +P +
Sbjct: 676 EPIRPRGQLRNLGLVEKPEFSDPLHGXDPAE 584
Score = 28.6 bits (56), Expect(4) = 1e-025
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = -1 / -1
Query: 428 AGNNLSSA*AAQKRAVARS*GSVGR 354
A NLSS AQ R+ AR+*GS GR
Sbjct: 417 AVGNLSSTYWAQNRSAARA*GSDGR 343
>gb|BF259078.2|BF259078 HVSMEf0017J19f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0017J19f, mRNA sequence
Length = 834
Score = 107 bits (229), Expect(4) = 1e-048
Identities = 42/59 (71%), Positives = 52/59 (88%)
Frame = +1 / +3
Query: 166 LALNMKGVSYEYVEEDISNKSELLLKSNPVHKKVPVLIHNGKPICESLVIMQYVDELFA 342
LAL+MKGV YEY+E D+ +K ELLL+ NPVHKKVPVLIHNG P+CES VI+QYVDE+++
Sbjct: 63 LALHMKGVGYEYIETDVLDKGELLLRYNPVHKKVPVLIHNGVPLCESQVIVQYVDEVWS 239
Score = 92.7 bits (196), Expect(2) = 3e-025
Identities = 42/66 (63%), Positives = 47/66 (71%)
Frame = -3 / -2
Query: 363 GWEDRPAGEQLVDVLHDDE*LADGLTVVDEHGHLLVHRVGLEQELTLVGYVLLDVLVTHS 184
G + G LVDVLHDD LA+ VVDEHGHLLVHRV E+EL LV +V LDVLV H+
Sbjct: 260 GEDGGAGGPDLVDVLHDDLRLAERHAVVDEHGHLLVHRVVAEEELALVQHVRLDVLVAHA 81
Query: 183 FHVQRQ 166
HVQRQ
Sbjct: 80 LHVQRQ 63
Score = 84.5 bits (178), Expect(4) = 1e-048
Identities = 33/67 (49%), Positives = 38/67 (56%)
Frame = +1 / +3
Query: 340 AGRPILPTDPYERATARFWAAYADDKLFPAWYGMVXXXXXXXXXXXXXXXXXXIEHMEVT 519
AG PILP DPY RATARFWAAY DDKLFPAW G++ + +EV
Sbjct: 240 AGAPILPADPYARATARFWAAYVDDKLFPAWLGILLAPTEAARAEKVDATLAALAQLEVA 419
Query: 520 FAKCSGG 540
A+C G
Sbjct: 420 AAECLDG 440
Score = 72.5 bits (152), Expect(3) = 2e-028
Identities = 33/72 (45%), Positives = 39/72 (54%)
Frame = -1 / -3
Query: 539 PPEHLAKVTSMCXXXXXXXXXXXXXXXXXXXFTMPYHAGNNLSSA*AAQKRAVARS*GSV 360
P H A TS C MP AGN+LSS *AAQKRAVAR+*GS
Sbjct: 439 PSRHSAAATSSCASAASVASTFSALAASVGARRMPSQAGNSLSST*AAQKRAVARA*GSA 260
Query: 359 GRIGRPANSSST 324
GR+G PA+ +S+
Sbjct: 259 GRMGAPADQTSS 224
Score = 64.3 bits (134), Expect(3) = 2e-028
Identities = 24/29 (82%), Positives = 25/29 (86%)
Frame = -1 / -3
Query: 335 SSSTYCMMTSDSQMGLPLWMSTGTFLCTG 249
+SSTYC MT DSQ G PLWMSTGTFLCTG
Sbjct: 232 TSSTYCTMTCDSQSGTPLWMSTGTFLCTG 146
Score = 42.8 bits (87), Expect(2) = 3e-025
Identities = 20/31 (64%), Positives = 21/31 (67%)
Frame = -3 / -2
Query: 432 PRWKQLVVGVGSPEASSGALVGVGWEDRPAG 340
P +QLVV VG PEA GA VGVG ED AG
Sbjct: 332 PGGEQLVVDVGGPEAGGGAGVGVGGEDGGAG 240
Score = 29.9 bits (59), Expect(4) = 1e-048
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = +1 / +2
Query: 106 GKEGLKVLGLQVSPFVLRV 162
G LK+LGL VSPFV RV
Sbjct: 2 GDGDLKLLGLMVSPFVTRV 58
Score = 28.1 bits (55), Expect(4) = 1e-048
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +1 / +3
Query: 535 GGNAFFGGDSIGYVDIVLTCS 597
G GGDSIG++D+ + C+
Sbjct: 441 GRRPLVGGDSIGFLDLAVGCN 503
Score = 26.7 bits (52), Expect(3) = 2e-028
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = -1 / -3
Query: 593 HVSTMST*PMESPPKKALPP 534
H + S PMESPP K L P
Sbjct: 499 HPTARSRNPMESPPTKGLLP 440
>gb|AL503233.1|AL503233 AL503233 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW01D13T 5', mRNA sequence
Length = 683
Score = 117 bits (251), Expect(2) = 2e-048
Identities = 46/77 (59%), Positives = 64/77 (83%)
Frame = +1 / +2
Query: 112 EGLKVLGLQVSPFVLRVCLALNMKGVSYEYVEEDISNKSELLLKSNPVHKKVPVLIHNGK 291
+ +K+LG +SPF RV +AL+ KGVSYEY+E+D+ +K +LLL SNPVH KVPVLIH G+
Sbjct: 107 DDVKLLGSVMSPFAXRVRMALHAKGVSYEYLEQDLFHKGDLLLASNPVHNKVPVLIHAGR 286
Query: 292 PICESLVIMQYVDELFA 342
P+CESL I++YV+E++A
Sbjct: 287 PVCESLAIVEYVNEVWA 337
Score = 95.5 bits (202), Expect(2) = 2e-048
Identities = 38/78 (48%), Positives = 44/78 (56%)
Frame = +1 / +2
Query: 343 GRPILPTDPYERATARFWAAYADDKLFPAWYGMVXXXXXXXXXXXXXXXXXXIEHMEVTF 522
G +LP DPY RA ARFWAAY DDKLFPAW G++ I ME
Sbjct: 341 GASLLPADPYGRAVARFWAAYVDDKLFPAWLGILRAATEEDRAEKLDAALAVIGLMEDAL 520
Query: 523 AKCSGGNAFFGGDSIGYV 576
A+CS G FF GDS+GY+
Sbjct: 521 AQCSDGKDFFAGDSVGYL 574
Score = 90.9 bits (192), Expect(2) = 9e-024
Identities = 43/73 (58%), Positives = 49/73 (67%)
Frame = -3 / -2
Query: 357 EDRPAGEQLVDVLHDDE*LADGLTVVDEHGHLLVHRVGLEQELTLVGYVLLDVLVTHSFH 178
E G LVDVL D + LADG VDEHG+L+VHRVG E+E+ LV VLL VLV +
Sbjct: 352 EGGAVGPDLVDVLDDGKRLADGPAGVDEHGNLVVHRVGGEEEVALVEQVLLQVLVADALG 173
Query: 177 VQRQAHAEHERAH 139
VQR AHA ERAH
Sbjct: 172 VQRHAHAXRERAH 134
Score = 79.0 bits (166), Expect(3) = 2e-026
Identities = 37/81 (45%), Positives = 43/81 (53%)
Frame = -1 / -3
Query: 569 PMESPPKKALPPEHLAKVTSMCXXXXXXXXXXXXXXXXXXXFTMPYHAGNNLSSA*AAQK 390
P ESP KK+ P EH A+ +SM MP HAGN+LSS *AAQK
Sbjct: 567 PTESPAKKSFPSEHWARASSMSPITASAASSFSALSSSVAARRMPNHAGNSLSST*AAQK 388
Query: 389 RAVARS*GSVGRIGRPANSSS 327
RA AR *GS GR P+ +S
Sbjct: 387 RATARP*GSAGRREAPSAQTS 325
Score = 56.1 bits (116), Expect(3) = 2e-026
Identities = 22/31 (70%), Positives = 23/31 (74%)
Frame = -1 / -3
Query: 341 ANSSSTYCMMTSDSQMGLPLWMSTGTFLCTG 249
A +S TY M SDSQ GLP WMSTGT LCTG
Sbjct: 336 AQTSLTYSTMASDSQTGLPAWMSTGTLLCTG 244
Score = 39.6 bits (80), Expect(2) = 9e-024
Identities = 17/27 (62%), Positives = 19/27 (70%)
Frame = -3 / -2
Query: 432 PRWKQLVVGVGSPEASSGALVGVGWED 352
PR +QLVV VG PEA A VGVG E+
Sbjct: 430 PRGEQLVVDVGGPEAGDSAAVGVGREE 350
Score = 22.1 bits (42), Expect(3) = 2e-026
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = -1 / -3
Query: 188 TPFMFSAKHTRSTNGL 141
TP SA TR NGL
Sbjct: 183 TPLACSAMRTRXANGL 136
>gb|BF625970.2|BF625970 HVSMEa0015B01f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0015B01f, mRNA sequence
Length = 720
Score = 141 bits (303), Expect(3) = 1e-047
Identities = 57/81 (70%), Positives = 71/81 (87%)
Frame = +1 / +1
Query: 100 MAGKEGLKVLGLQVSPFVLRVCLALNMKGVSYEYVEEDISNKSELLLKSNPVHKKVPVLI 279
MAG + LK+LG SPFV RV LAL +KG+SYE VEE++SNKSELLLKSNPVHKK+PVLI
Sbjct: 97 MAGGDDLKLLGAWPSPFVTRVKLALALKGLSYEDVEENLSNKSELLLKSNPVHKKIPVLI 276
Query: 280 HNGKPICESLVIMQYVDELFA 342
HNG P+CES++I+QY+D++FA
Sbjct: 277 HNGSPVCESMIIVQYIDDVFA 339
Score = 101 bits (216), Expect(2) = 4e-026
Identities = 47/82 (57%), Positives = 58/82 (70%)
Frame = -3 / -1
Query: 345 AGEQLVDVLHDDE*LADGLTVVDEHGHLLVHRVGLEQELTLVGYVLLDVLVTHSFHVQRQ 166
AGE +VDVLHDD LA VVDEHG+LLVHRVGLE+EL LVG VLL VLV + +R+
Sbjct: 342 AGEDVVDVLHDDHGLAYRGAVVDEHGYLLVHRVGLEEELALVGQVLLHVLVAQALQGERE 163
Query: 165 AHAEHERAHLQAEDLKTLLARH 100
H+ +ERA AE L+ + + H
Sbjct: 162 LHSGNERAWPCAEQLQVISSGH 97
Score = 51.9 bits (107), Expect(3) = 1e-047
Identities = 19/30 (63%), Positives = 20/30 (66%)
Frame = +1 / +1
Query: 343 GRPILPTDPYERATARFWAAYADDKLFPAW 432
G +L DPYERA ARFW AY DDKL W
Sbjct: 346 GPSLLSEDPYERAVARFWVAYVDDKLVAPW 435
Score = 36.3 bits (73), Expect(2) = 4e-026
Identities = 18/27 (66%), Positives = 18/27 (66%)
Frame = -3 / -1
Query: 420 QLVVGVGSPEASSGALVGVGWEDRPAG 340
QLVV VG PEAS GA VGV E AG
Sbjct: 423 QLVVNVGHPEASHGAFVGVLGEKGRAG 343
Score = 35.4 bits (71), Expect(3) = 1e-047
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +1 / +1
Query: 499 IEHMEVTFAKCSGGNAFFGGDSIGYVDIVL 588
+E +E +CS G FFGGD + VD+ L
Sbjct: 502 VEVLEGALRECSKGGDFFGGDGVRLVDVAL 591
>gb|BI949438.1|BI949438 HVSMEl0013O11f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0013O11f, mRNA sequence
Length = 922
Score = 118 bits (253), Expect(3) = 2e-047
Identities = 46/77 (59%), Positives = 65/77 (84%)
Frame = +1 / +3
Query: 112 EGLKVLGLQVSPFVLRVCLALNMKGVSYEYVEEDISNKSELLLKSNPVHKKVPVLIHNGK 291
+ +K+LG +SPF +RV +AL+ KGVSYEY+E+D+ +K +LLL SNPVH KVPVLIH G+
Sbjct: 96 DDVKLLGSVMSPFAVRVRMALHAKGVSYEYLEQDLFHKGDLLLASNPVHNKVPVLIHAGR 275
Query: 292 PICESLVIMQYVDELFA 342
P+CESL I++YV+E++A
Sbjct: 276 PVCESLAIVEYVNEVWA 326
Score = 91.3 bits (193), Expect(2) = 7e-024
Identities = 43/73 (58%), Positives = 49/73 (67%)
Frame = -3 / -3
Query: 357 EDRPAGEQLVDVLHDDE*LADGLTVVDEHGHLLVHRVGLEQELTLVGYVLLDVLVTHSFH 178
E G LVDVL D + LADG VDEHG L+VHRVG E+E+ LV VLL VLV +
Sbjct: 341 EGGAVGPDLVDVLDDGKRLADGPAGVDEHGDLVVHRVGGEEEVALVEQVLLQVLVADALG 162
Query: 177 VQRQAHAEHERAH 139
VQR AHA+ ERAH
Sbjct: 161 VQRHAHADRERAH 123
Score = 80.3 bits (169), Expect(3) = 2e-047
Identities = 33/70 (47%), Positives = 37/70 (52%)
Frame = +1 / +3
Query: 343 GRPILPTDPYERATARFWAAYADDKLFPAWYGMVXXXXXXXXXXXXXXXXXXIEHMEVTF 522
G +LP DPY RA ARFWAAY DDKLFPAW G++ I ME
Sbjct: 330 GASLLPADPYGRAVARFWAAYVDDKLFPAWLGILRAATEEDRAEKLDAALAVIGLMEDAL 509
Query: 523 AKCSGGNAFF 552
A+CS G FF
Sbjct: 510 AQCSDGKDFF 539
Score = 69.3 bits (145), Expect(3) = 9e-024
Identities = 33/75 (44%), Positives = 39/75 (52%)
Frame = -1 / -1
Query: 551 KKALPPEHLAKVTSMCXXXXXXXXXXXXXXXXXXXFTMPYHAGNNLSSA*AAQKRAVARS 372
KK+ P EH A+ +SM MP HAGN+LSS *AAQKRA AR
Sbjct: 538 KKSFPSEHWARASSMSPITASAASSFSALSSSVAARRMPNHAGNSLSST*AAQKRATARP 359
Query: 371 *GSVGRIGRPANSSS 327
*GS GR P+ +S
Sbjct: 358 *GSAGRREAPSAQTS 314
Score = 56.1 bits (116), Expect(3) = 9e-024
Identities = 22/31 (70%), Positives = 23/31 (74%)
Frame = -1 / -1
Query: 341 ANSSSTYCMMTSDSQMGLPLWMSTGTFLCTG 249
A +S TY M SDSQ GLP WMSTGT LCTG
Sbjct: 325 AQTSLTYSTMASDSQTGLPAWMSTGTLLCTG 233
Score = 39.6 bits (80), Expect(2) = 7e-024
Identities = 17/27 (62%), Positives = 19/27 (70%)
Frame = -3 / -3
Query: 432 PRWKQLVVGVGSPEASSGALVGVGWED 352
PR +QLVV VG PEA A VGVG E+
Sbjct: 419 PRGEQLVVDVGGPEAGDSAAVGVGREE 339
Score = 29.5 bits (58), Expect(3) = 2e-047
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +1 / +1
Query: 538 GNAFFGGDSIGYVDIVLTCS 597
G F G+S+GY+D+ L C+
Sbjct: 526 GKTSFAGNSVGYLDLALGCN 585
Score = 22.6 bits (43), Expect(3) = 9e-024
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -1 / -1
Query: 188 TPFMFSAKHTRSTNGL 141
TP SA TR+ NGL
Sbjct: 172 TPLACSAMRTRTANGL 125
>gb|BF624202.2|BF624202 HVSMEa0012J22f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0012J22f, mRNA sequence
Length = 487
Score = 153 bits (329), Expect(2) = 2e-047
Identities = 61/87 (70%), Positives = 76/87 (87%)
Frame = +1 / +1
Query: 85 LERETMAGKEGLKVLGLQVSPFVLRVCLALNMKGVSYEYVEEDISNKSELLLKSNPVHKK 264
+++ETMAG E LK+LG SPFV RV LAL++KG+S+E VEED+ NKSELLL SNPVHKK
Sbjct: 52 IKQETMAGGEDLKLLGAWASPFVTRVKLALSLKGLSFEDVEEDLGNKSELLLSSNPVHKK 231
Query: 265 VPVLIHNGKPICESLVIMQYVDELFAG 345
VPVL+HNGKP+CES++I+QY+DE FAG
Sbjct: 232 VPVLVHNGKPVCESVIILQYIDEAFAG 312
Score = 92.7 bits (196), Expect(2) = 1e-023
Identities = 42/82 (51%), Positives = 54/82 (65%)
Frame = -3 / -2
Query: 345 AGEQLVDVLHDDE*LADGLTVVDEHGHLLVHRVGLEQELTLVGYVLLDVLVTHSFHVQRQ 166
AGE+L+DVL DD *LA GL++V+EH HLLVH V E+EL LV VLLD+L + QR+
Sbjct: 312 AGERLIDVLKDDH*LAHGLSIVNEHWHLLVHWVRAEEELALVAQVLLDILEAQALEAQRK 133
Query: 165 AHAEHERAHLQAEDLKTLLARH 100
H +RA AE L+ + H
Sbjct: 132 LHPGDKRACPSAEQLQVFSSGH 67
Score = 56.5 bits (117), Expect(2) = 2e-047
Identities = 20/30 (66%), Positives = 23/30 (76%)
Frame = +1 / +1
Query: 343 GRPILPTDPYERATARFWAAYADDKLFPAW 432
G +LP+DPY+RA ARFWAAY DDKL W
Sbjct: 316 GPSLLPSDPYQRAVARFWAAYIDDKLVAPW 405
Score = 37.3 bits (75), Expect(2) = 1e-023
Identities = 19/36 (52%), Positives = 24/36 (66%)
Frame = -1 / -3
Query: 431 HAGNNLSSA*AAQKRAVARS*GSVGRIGRPANSSST 324
H +LSS *AAQKRA AR *GS GR P ++++
Sbjct: 404 HGATSLSSM*AAQKRATARW*GSEGRREGPMPANAS 297
>gb|BF631562.2|BF631562 HVSMEb0016G15f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0016G15f, mRNA sequence
Length = 830
Score = 134 bits (288), Expect(4) = 3e-047
Identities = 54/80 (67%), Positives = 70/80 (87%)
Frame = +1 / +1
Query: 106 GKEGLKVLGLQVSPFVLRVCLALNMKGVSYEYVEEDISNKSELLLKSNPVHKKVPVLIHN 285
G + +K+LG+ SPFVLR+ LAL++KGV+YEYVEED+ +KSELLL+SNPV +KVPVLIH+
Sbjct: 37 GNDEVKLLGMWASPFVLRIKLALSLKGVAYEYVEEDLKSKSELLLRSNPVLQKVPVLIHD 216
Query: 286 GKPICESLVIMQYVDELFAG 345
GKP+ ES VI+QY+DE FAG
Sbjct: 217 GKPVSESSVILQYIDEAFAG 276
Score = 45.5 bits (93), Expect(4) = 3e-047
Identities = 20/53 (37%), Positives = 27/53 (50%)
Frame = +1 / +1
Query: 499 IEHMEVTFAKCSGGNAFFGGDSIGYVDIVLTCSAPSCSGSRRCAGFSTWRSLT 657
+E +E CS G FFGGD+ GYVD++L P S + G T+ T
Sbjct: 436 VETLEGALRDCSNGKPFFGGDTAGYVDVMLGGLLPWVHTSDKMKGVKTFDPAT 594
Score = 40.9 bits (83), Expect(4) = 3e-047
Identities = 16/29 (55%), Positives = 19/29 (65%)
Frame = +1 / +1
Query: 343 GRPILPTDPYERATARFWAAYADDKLFPA 429
G +LP +P+ RA ARFWAAY D L A
Sbjct: 280 GPSLLPEEPHGRAVARFWAAYIDGTLVKA 366
Score = 24.0 bits (46), Expect(4) = 3e-047
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = +2 / +3
Query: 665 DSAVGCVGG 691
DSA+GCVGG
Sbjct: 594 DSALGCVGG 620
>gb|BF622512.2|BF622512 HVSMEa0004K18f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0004K18f, mRNA sequence
Length = 487
Score = 152 bits (326), Expect(2) = 4e-047
Identities = 61/85 (71%), Positives = 74/85 (87%)
Frame = +1 / +2
Query: 91 RETMAGKEGLKVLGLQVSPFVLRVCLALNMKGVSYEYVEEDISNKSELLLKSNPVHKKVP 270
+ETMAG E LK+LG SPFV RV LAL++KG+S+E VEED+ NKSELLL SNPVHKKVP
Sbjct: 50 QETMAGGEDLKLLGAWASPFVTRVKLALSLKGLSFEDVEEDLGNKSELLLSSNPVHKKVP 229
Query: 271 VLIHNGKPICESLVIMQYVDELFAG 345
VL+HNGKP+CES++I+QY+DE FAG
Sbjct: 230 VLVHNGKPVCESVIILQYIDEAFAG 304
Score = 92.7 bits (196), Expect(2) = 1e-023
Identities = 42/82 (51%), Positives = 54/82 (65%)
Frame = -3 / -1
Query: 345 AGEQLVDVLHDDE*LADGLTVVDEHGHLLVHRVGLEQELTLVGYVLLDVLVTHSFHVQRQ 166
AGE+L+DVL DD *LA GL++V+EH HLLVH V E+EL LV VLLD+L + QR+
Sbjct: 304 AGERLIDVLKDDH*LAHGLSIVNEHWHLLVHWVRAEEELALVAQVLLDILEAQALEAQRK 125
Query: 165 AHAEHERAHLQAEDLKTLLARH 100
H +RA AE L+ + H
Sbjct: 124 LHPGDKRACPSAEQLQVFSSGH 59
Score = 56.5 bits (117), Expect(2) = 4e-047
Identities = 20/30 (66%), Positives = 23/30 (76%)
Frame = +1 / +2
Query: 343 GRPILPTDPYERATARFWAAYADDKLFPAW 432
G +LP+DPY+RA ARFWAAY DDKL W
Sbjct: 308 GPSLLPSDPYQRAVARFWAAYIDDKLVAPW 397
Score = 37.3 bits (75), Expect(2) = 1e-023
Identities = 19/36 (52%), Positives = 24/36 (66%)
Frame = -1 / -2
Query: 431 HAGNNLSSA*AAQKRAVARS*GSVGRIGRPANSSST 324
H +LSS *AAQKRA AR *GS GR P ++++
Sbjct: 396 HGATSLSSM*AAQKRATARW*GSEGRREGPMPANAS 289
>gb|BF621473.2|BF621473 HVSMEa0011B16f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0011B16f, mRNA sequence
Length = 848
Score = 137 bits (293), Expect(3) = 1e-046
Identities = 53/78 (67%), Positives = 67/78 (85%)
Frame = +1 / +2
Query: 112 EGLKVLGLQVSPFVLRVCLALNMKGVSYEYVEEDISNKSELLLKSNPVHKKVPVLIHNGK 291
+ +K+LG+ SP+VLRV LAL++KG+ YEY EED+ +KSELLL+SNPVH KVPVLIH GK
Sbjct: 92 DDVKLLGMWASPYVLRVRLALSIKGIRYEYAEEDLRHKSELLLRSNPVHNKVPVLIHGGK 271
Query: 292 PICESLVIMQYVDELFAG 345
P+CESLVI+QY+DE F G
Sbjct: 272 PVCESLVILQYIDEAFGG 325
Score = 77.1 bits (162), Expect(3) = 4e-022
Identities = 36/73 (49%), Positives = 49/73 (67%)
Frame = -3 / -2
Query: 345 AGEQLVDVLHDDE*LADGLTVVDEHGHLLVHRVGLEQELTLVGYVLLDVLVTHSFHVQRQ 166
+ E LVDVL DD+ LADGL VD+HG L++ V E++L LV VLL VLVT + +R+
Sbjct: 325 SAESLVDVLQDDQRLADGLAAVDQHGDLVMDGV*PEEQLALVPKVLLRVLVTDALDAERK 146
Query: 165 AHAEHERAHLQAE 127
AH++ RA A+
Sbjct: 145 AHSQDVRARPHAQ 107
Score = 47.8 bits (98), Expect(3) = 1e-046
Identities = 18/30 (60%), Positives = 22/30 (73%)
Frame = +1 / +2
Query: 340 AGRPILPTDPYERATARFWAAYADDKLFPA 429
AG +LP DP+ERA ARFWAA+ +D L A
Sbjct: 326 AGPALLPADPHERAVARFWAAFIEDTLVKA 415
Score = 40.5 bits (82), Expect(3) = 1e-046
Identities = 17/27 (62%), Positives = 18/27 (66%)
Frame = +1 / +2
Query: 508 MEVTFAKCSGGNAFFGGDSIGYVDIVL 588
+EV S G FFGGDS GYVDIVL
Sbjct: 494 LEVALRDVSMGKPFFGGDSAGYVDIVL 574
Score = 33.1 bits (66), Expect(3) = 4e-022
Identities = 15/26 (57%), Positives = 16/26 (61%)
Frame = -1 / -3
Query: 587 STMST*PMESPPKKALPPEHLAKVTS 510
STMST P SPPKK P E + TS
Sbjct: 573 STMSTYPALSPPKKGFPMETSLRATS 496
Score = 32.2 bits (64), Expect(3) = 4e-022
Identities = 17/30 (56%), Positives = 19/30 (63%)
Frame = -1 / -3
Query: 428 AGNNLSSA*AAQKRAVARS*GSVGRIGRPA 339
A ++SS AAQ RA ARS GS GR PA
Sbjct: 414 AFTSVSSMKAAQNRATARSWGSAGRRAGPA 325
>gb|BF626678.2|BF626678 HVSMEb0001A21f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0001A21f, mRNA sequence
Length = 851
Score = 131 bits (281), Expect(3) = 3e-046
Identities = 53/76 (69%), Positives = 65/76 (85%)
Frame = +1 / +1
Query: 118 LKVLGLQVSPFVLRVCLALNMKGVSYEYVEEDISNKSELLLKSNPVHKKVPVLIHNGKPI 297
LK+LG PF LRV LALN KG+SYEY EED++NKS+LLL+SNPV+KKVPVLIHNG PI
Sbjct: 289 LKLLGTWRGPFALRVRLALNFKGLSYEYQEEDLANKSDLLLESNPVNKKVPVLIHNGVPI 468
Query: 298 CESLVIMQYVDELFAG 345
CESL I++Y+DE++ G
Sbjct: 469 CESLAILEYIDEVYRG 516
Score = 61.1 bits (127), Expect(3) = 3e-046
Identities = 26/66 (39%), Positives = 31/66 (46%)
Frame = +1 / +1
Query: 343 GRPILPTDPYERATARFWAAYADDKLFPAWYGMVXXXXXXXXXXXXXXXXXXIEHMEVTF 522
G +LP DPY+RA ARFWAAY D L W+ M +E +EV
Sbjct: 520 GPCLLPGDPYQRAVARFWAAYIDQNLVAPWWRMFVGXTDKEKHEGTKQTLAAVEKLEVAL 699
Query: 523 AKCSGG 540
KC G
Sbjct: 700 KKCFSG 717
Score = 31.8 bits (63), Expect(3) = 3e-046
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +1 / +2
Query: 532 SGGNAFFGGDSIGYVDI 582
S GN FFGGD GY+D+
Sbjct: 710 SVGNPFFGGDKRGYIDL 760
>gb|BF622191.2|BF622191 HVSMEa0001P16f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0001P16f, mRNA sequence
Length = 694
Score = 153 bits (329), Expect(2) = 4e-046
Identities = 61/87 (70%), Positives = 76/87 (87%)
Frame = +1 / +2
Query: 85 LERETMAGKEGLKVLGLQVSPFVLRVCLALNMKGVSYEYVEEDISNKSELLLKSNPVHKK 264
+++ETMAG E LK+LG SPFV RV LAL++KG+S+E VEED+ NKSELLL SNPVHKK
Sbjct: 44 IKQETMAGGEDLKLLGAWASPFVTRVKLALSLKGLSFEDVEEDLGNKSELLLSSNPVHKK 223
Query: 265 VPVLIHNGKPICESLVIMQYVDELFAG 345
VPVL+HNGKP+CES++I+QY+DE FAG
Sbjct: 224 VPVLVHNGKPVCESVIILQYIDEAFAG 304
Score = 92.7 bits (196), Expect(2) = 6e-023
Identities = 42/82 (51%), Positives = 54/82 (65%)
Frame = -3 / -1
Query: 345 AGEQLVDVLHDDE*LADGLTVVDEHGHLLVHRVGLEQELTLVGYVLLDVLVTHSFHVQRQ 166
AGE+L+DVL DD *LA GL++V+EH HLLVH V E+EL LV VLLD+L + QR+
Sbjct: 304 AGERLIDVLKDDH*LAHGLSIVNEHWHLLVHWVRAEEELALVAQVLLDILEAQALEAQRK 125
Query: 165 AHAEHERAHLQAEDLKTLLARH 100
H +RA AE L+ + H
Sbjct: 124 LHPGDKRACPSAEQLQVFSSGH 59
Score = 51.9 bits (107), Expect(2) = 4e-046
Identities = 18/26 (69%), Positives = 22/26 (84%)
Frame = +1 / +2
Query: 343 GRPILPTDPYERATARFWAAYADDKL 420
G +LP+DPY+RA ARFWAAY DDK+
Sbjct: 308 GPSVLPSDPYQRAVARFWAAYIDDKV 385
Score = 35.0 bits (70), Expect(2) = 6e-023
Identities = 15/23 (65%), Positives = 17/23 (73%)
Frame = -3 / -1
Query: 417 LVVGVGSPEASSGALVGVGWEDR 349
LVV VG PEA +G LVGV +DR
Sbjct: 382 LVVDVGGPEAGNGTLVGVRGKDR 314
>gb|CA006848.1|CA006848 HU05N24r HU Hordeum vulgare subsp. vulgare cDNA clone HU05N24
5-PRIME, mRNA sequence
Length = 599
Score = 138 bits (295), Expect(3) = 1e-045
Identities = 57/81 (70%), Positives = 69/81 (85%)
Frame = +1 / +3
Query: 103 AGKEGLKVLGLQVSPFVLRVCLALNMKGVSYEYVEEDISNKSELLLKSNPVHKKVPVLIH 282
AG + LK+LG+ SP VLRV LAL++KGV+YEYVEED +NKSELLL+SNPVH VPVLIH
Sbjct: 105 AGGDDLKLLGMWASPAVLRVRLALSIKGVTYEYVEEDFANKSELLLRSNPVHNMVPVLIH 284
Query: 283 NGKPICESLVIMQYVDELFAG 345
GKP+CES +I+QY+DE FAG
Sbjct: 285 AGKPVCESQLIIQYLDEAFAG 347
Score = 50.6 bits (104), Expect(3) = 1e-045
Identities = 18/28 (64%), Positives = 21/28 (75%)
Frame = +1 / +3
Query: 352 ILPTDPYERATARFWAAYADDKLFPAWY 435
+LP DPY+RA ARFWAA+ DD L A Y
Sbjct: 363 LLPADPYQRAVARFWAAFIDDTLLKAMY 446
Score = 33.6 bits (67), Expect(3) = 1e-045
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +1 / +1
Query: 499 IEHMEVTFAKCSGGNAFFGGDSIGYVDIV 585
++ ++ + +GG FFGGD GYVD V
Sbjct: 511 LKTLDGALGEVAGGKPFFGGDGPGYVDTV 597
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 413,781,436
Number of Sequences: 312970
Number of extensions: 6204372
Number of successful extensions: 66623
Number of sequences better than 1.0e-020: 451
length of database: 58,378,179
effective HSP length: 52
effective length of database: 42,103,739
effective search space used: 11999565615
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)