TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3713002.2.1
(923 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AV925542.1|AV925542 AV925542 K. Sato unpublished cDNA li... 339 2e-092
gb|AV926710.1|AV926710 AV926710 K. Sato unpublished cDNA li... 339 2e-092
gb|BQ465340.1|BQ465340 HU03F15r HU Hordeum vulgare subsp. v... 339 2e-092
gb|CA018533.1|CA018533 HV08O12r HV Hordeum vulgare subsp. v... 339 2e-092
emb|X52572.1|HVBDG Barley DNA for (1-3,1-4)-beta-D-glucanas... 339 2e-092
emb|X56775.1|HVGLB1 H.vulgare Glb 1 gene for 1-3,1-4-beta-D... 339 2e-092
emb|X56260.1|HVGLUEND Barley DNA for (1,3;1,4)-beta-glucana... 339 2e-092
gb|CB884203.1|CB884203 HV10H06u HV Hordeum vulgare subsp. v... 310 8e-084
gb|BF253425.2|BF253425 HVSMEf0001G05f Hordeum vulgare seedl... 297 2e-082
gb|BI950595.1|BI950595 HVSMEl0021J13f Hordeum vulgare spike... 293 7e-079
gb|CB877858.1|CB877858 HP06G23T HP Hordeum vulgare subsp. v... 291 4e-078
gb|BJ546633.1|BJ546633 BJ546633 K. Sato unpublished cDNA li... 277 7e-074
gb|BJ545156.1|BJ545156 BJ545156 K. Sato unpublished cDNA li... 276 1e-073
gb|CB884213.1|CB884213 HV14A09u HV Hordeum vulgare subsp. v... 266 1e-070
gb|BF258566.3|BF258566 HVSMEf0016B09f Hordeum vulgare seedl... 261 3e-069
gb|BI950008.1|BI950008 HVSMEl0017K22f Hordeum vulgare spike... 261 5e-069
gb|BI950007.1|BI950007 HVSMEl0017K20f Hordeum vulgare spike... 257 8e-068
gb|BG415255.2|BG415255 HVSMEk0005L24f Hordeum vulgare testa... 256 1e-067
gb|AV923914.1|AV923914 AV923914 K. Sato unpublished cDNA li... 253 1e-066
gb|CK125397.1|CK125397 BES1824107o07 BES1824 Hordeum vulgar... 246 2e-064
gb|AV927218.1|AV927218 AV927218 K. Sato unpublished cDNA li... 244 4e-064
gb|CB884195.1|CB884195 HV09B24r HV Hordeum vulgare subsp. v... 232 3e-060
gb|BI947339.1|BI947339 HVSMEl0005D01f Hordeum vulgare spike... 231 4e-060
gb|AV923570.1|AV923570 AV923570 K. Sato unpublished cDNA li... 230 8e-060
gb|DW474925.1|DW474925 1-n92 Subtracted libraries from epid... 230 8e-060
gb|AV928494.1|AV928494 AV928494 K. Sato unpublished cDNA li... 228 4e-059
gb|BF265541.2|BF265541 HV_CEa0012I19f Hordeum vulgare seedl... 222 2e-057
gb|BJ545434.1|BJ545434 BJ545434 K. Sato unpublished cDNA li... 211 4e-054
gb|BI953200.1|BI953200 HVSMEm0011J22f Hordeum vulgare green... 209 2e-053
gb|CB884196.1|CB884196 HV09B24u HV Hordeum vulgare subsp. v... 209 2e-053
gb|CB884210.1|CB884210 HV12O06u HV Hordeum vulgare subsp. v... 209 2e-053
gb|AV927361.1|AV927361 AV927361 K. Sato unpublished cDNA li... 209 2e-053
gb|BF257633.2|BF257633 HVSMEf0013G15f Hordeum vulgare seedl... 207 6e-053
gb|BQ664638.1|BQ664638 HV04D23u HV Hordeum vulgare subsp. v... 207 6e-053
gb|CB879399.1|CB879399 HP02B03w HP Hordeum vulgare subsp. v... 201 4e-051
gb|BG310053.1|BG310053 HVSMEc0016D10f Hordeum vulgare seedl... 183 8e-051
gb|BJ547063.1|BJ547063 BJ547063 K. Sato unpublished cDNA li... 197 9e-050
gb|AV929134.1|AV929134 AV929134 K. Sato unpublished cDNA li... 196 2e-049
gb|AV930490.1|AV930490 AV930490 K. Sato unpublished cDNA li... 196 2e-049
gb|CD663219.1|CD663219 UCRHV18_04da12_b1 Drought-stressed D... 196 2e-049
gb|AV928013.1|AV928013 AV928013 K. Sato unpublished cDNA li... 153 6e-049
gb|BQ468175.1|BQ468175 HP01E06T HP Hordeum vulgare subsp. v... 194 6e-049
gb|BJ456617.1|BJ456617 BJ456617 K. Sato unpublished cDNA li... 143 2e-048
gb|BJ548188.1|BJ548188 BJ548188 K. Sato unpublished cDNA li... 190 1e-047
gb|BQ661884.1|BQ661884 HP01K19w HP Hordeum vulgare subsp. v... 188 4e-047
gb|AV931182.1|AV931182 AV931182 K. Sato unpublished cDNA li... 173 6e-046
gb|BJ543926.1|BJ543926 BJ543926 K. Sato unpublished cDNA li... 184 7e-046
gb|AV928558.1|AV928558 AV928558 K. Sato unpublished cDNA li... 153 1e-045
gb|BU981210.1|BU981210 HA22P03r HA Hordeum vulgare subsp. v... 131 4e-045
gb|AV928246.1|AV928246 AV928246 K. Sato unpublished cDNA li... 153 4e-042
gb|BQ661780.1|BQ661780 HP01E06w HP Hordeum vulgare subsp. v... 171 5e-042
gb|BJ461506.1|BJ461506 BJ461506 K. Sato unpublished cDNA li... 124 1e-040
gb|AV911030.1|AV911030 AV911030 K. Sato unpublished cDNA li... 124 1e-040
gb|BJ458099.1|BJ458099 BJ458099 K. Sato unpublished cDNA li... 124 1e-040
gb|BJ460297.1|BJ460297 BJ460297 K. Sato unpublished cDNA li... 124 1e-040
gb|BJ452749.1|BJ452749 BJ452749 K. Sato unpublished cDNA li... 124 1e-040
gb|BJ452679.1|BJ452679 BJ452679 K. Sato unpublished cDNA li... 123 2e-040
gb|BU980481.1|BU980481 HA20M14r HA Hordeum vulgare subsp. v... 131 7e-040
gb|BU981251.1|BU981251 HA23B03r HA Hordeum vulgare subsp. v... 131 7e-040
gb|AV931924.1|AV931924 AV931924 K. Sato unpublished cDNA li... 163 2e-039
gb|BJ456958.1|BJ456958 BJ456958 K. Sato unpublished cDNA li... 124 3e-039
gb|BE421550.1|BE421550 HWM010.E03 ITEC HWM Barley Leaf Libr... 160 7e-039
gb|BQ464233.1|BQ464233 HF01L09T HF Hordeum vulgare subsp. v... 160 7e-039
gb|BE420625.1|BE420625 HWM000.H02 ITEC HWM Barley Leaf Libr... 159 2e-038
gb|BJ449157.1|BJ449157 BJ449157 K. Sato unpublished cDNA li... 108 4e-038
gb|M96938.1|BLYGLCNHI Hordeum vulgare glucan endo-1,3-beta-... 121 8e-038
gb|AV930079.1|AV930079 AV930079 K. Sato unpublished cDNA li... 120 1e-037
gb|CB879505.1|CB879505 HP02I04w HP Hordeum vulgare subsp. v... 120 1e-037
gb|AF479647.2| Hordeum vulgare subsp. vulgare beta-1,3-gluc... 126 5e-037
emb|AJ271367.1|HVU271367 Hordeum vulgare mRNA for beta-1,3-... 126 5e-037
gb|AF515785.1| Hordeum vulgare subsp. vulgare beta-1,3-gluc... 126 5e-037
gb|BE601595.2|BE601595 HVSMEh0098M24f Hordeum vulgare 5-45 ... 126 5e-037
gb|BJ449523.1|BJ449523 BJ449523 K. Sato unpublished cDNA li... 124 9e-037
gb|AL510583.1|AL510583 AL510583 Hordeum vulgare Barke devel... 131 9e-037
gb|BE421248.1|BE421248 HWM007.D01 ITEC HWM Barley Leaf Libr... 153 2e-036
gb|AV909148.1|AV909148 AV909148 K. Sato unpublished cDNA li... 122 4e-036
gb|M96939.1|BLYGLCNHV Hordeum vulgare glucan endo-1,3-beta-... 121 6e-036
gb|BQ766726.1|BQ766726 EBro08_SQ006_O23_R root, 3 week, dro... 121 6e-036
gb|BQ664073.1|BQ664073 HV01J14w HV Hordeum vulgare subsp. v... 149 2e-035
gb|BF258041.2|BF258041 HVSMEf0014J07f Hordeum vulgare seedl... 119 6e-035
gb|U96096.1|HVU96096 Hordeum vulgare endo-1,3-beta-glucanas... 68 9e-035
gb|BF263831.2|BF263831 HV_CEa0007M17f Hordeum vulgare seedl... 115 1e-034
gb|AL500833.1|AL500833 AL500833 Hordeum vulgare Barke roots... 134 2e-034
gb|BE421306.1|BE421306 HWM007.H11 ITEC HWM Barley Leaf Libr... 144 7e-034
gb|AY239039.1| Hordeum vulgare subsp. vulgare clone SMEm002... 130 9e-034
gb|BJ454422.1|BJ454422 BJ454422 K. Sato unpublished cDNA li... 130 9e-034
gb|BJ450923.1|BJ450923 BJ450923 K. Sato unpublished cDNA li... 130 9e-034
gb|BQ768478.1|BQ768478 EBro08_SQ011_G22_R root, 3 week, dro... 121 2e-033
gb|CA016370.1|CA016370 HV09A23u HV Hordeum vulgare subsp. v... 142 3e-033
gb|CA017223.1|CA017223 HV14D06u HV Hordeum vulgare subsp. v... 142 3e-033
gb|AY239038.1| Hordeum vulgare subsp. vulgare clone CEa0006... 126 2e-032
gb|BQ766640.1|BQ766640 EBro08_SQ006_O15_R root, 3 week, dro... 118 3e-031
gb|BJ460231.1|BJ460231 BJ460231 K. Sato unpublished cDNA li... 123 4e-031
gb|BQ659785.1|BQ659785 HF01L09w HF Hordeum vulgare subsp. v... 135 4e-031
gb|CB877331.1|CB877331 HP04H07T HP Hordeum vulgare subsp. v... 120 2e-030
gb|BJ462228.1|BJ462228 BJ462228 K. Sato unpublished cDNA li... 130 1e-029
gb|BQ663609.1|BQ663609 HU03F15u HU Hordeum vulgare subsp. v... 130 1e-029
gb|CA016459.1|CA016459 HV08O12u HV Hordeum vulgare subsp. v... 130 1e-029
gb|CD662956.1|CD662956 UCRHV18_03db04_b1 Drought-stressed D... 130 1e-029
gb|BF261425.2|BF261425 HV_CEa0001E01f Hordeum vulgare seedl... 127 1e-028
gb|CB879474.1|CB879474 HP02G13w HP Hordeum vulgare subsp. v... 120 1e-028
gb|CB876783.1|CB876783 HP02G13T HP Hordeum vulgare subsp. v... 120 1e-028
gb|CB878498.1|CB878498 HP08L24T HP Hordeum vulgare subsp. v... 120 1e-028
gb|BM370310.2|BM370310 EBro08_SQ003_M21_R root, 3 week, dro... 68 3e-028
gb|BF260325.2|BF260325 HVSMEf0021L05f Hordeum vulgare seedl... 118 9e-028
gb|CD662424.1|CD662424 UCRHV18_02ae08_b1 Drought-stressed D... 123 1e-027
gb|AL509694.1|AL509694 AL509694 Hordeum vulgare Barke devel... 106 2e-027
gb|BJ453971.1|BJ453971 BJ453971 K. Sato unpublished cDNA li... 90 2e-026
gb|CK125687.1|CK125687 BES1824110a22 BES1824 Hordeum vulgar... 84 8e-026
gb|BQ767737.1|BQ767737 EBro08_SQ009_P13_R root, 3 week, dro... 101 2e-024
gb|BF254405.2|BF254405 HVSMEf0003O17f Hordeum vulgare seedl... 110 2e-023
gb|BI957130.1|BI957130 HVSMEn0007K04f Hordeum vulgare rachi... 108 5e-023
gb|CD663748.1|CD663748 UCRHV18_06ca11_b1 Drought-stressed D... 108 5e-023
gb|CA017203.1|CA017203 HV14G01u HV Hordeum vulgare subsp. v... 100 9e-021
>gb|AV925542.1|AV925542 AV925542 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd24m02 5', mRNA sequence
Length = 643
Score = 339 bits (734), Expect = 2e-092
Identities = 133/148 (89%), Positives = 141/148 (95%)
Frame = +3 / +1
Query: 3 RTGSPLMANIYPYLAWAYNPSAMDMSYALFTSSGTVVQDGAYGYQNLFDTTVDAFYVAMG 182
RTG+PLMANIYPYLAWAYNPSAMDMSYALFT+SGTVVQDG+YGYQNLFDTTVDAFY AM
Sbjct: 73 RTGAPLMANIYPYLAWAYNPSAMDMSYALFTASGTVVQDGSYGYQNLFDTTVDAFYTAMA 252
Query: 183 KNGGSGVPLVVSESGWPSGGGVQATPANARVYNQYLINHVGRGTPRHPGAIETYLFSMFN 362
K+GGS V LVVSESGWPS GG ATPANAR+YNQYLINHVGRGTPRHPGAIETY+FSMFN
Sbjct: 253 KHGGSNVKLVVSESGWPSAGGTAATPANARIYNQYLINHVGRGTPRHPGAIETYVFSMFN 432
Query: 363 ENQKESGVEQNWGLFYPNMQHVYPISF* 446
ENQK++GVEQNWGLFYPNMQHVYPISF*
Sbjct: 433 ENQKDNGVEQNWGLFYPNMQHVYPISF* 516
Score = 296 bits (640), Expect = 2e-079
Identities = 129/148 (87%), Positives = 130/148 (87%)
Frame = -2 / -3
Query: 445 QKLMG*TCCMLG*KSPQFCSTPLSFWFSLNMEKR*VSMAPGWRGVPRPTWLMRYWLYTLA 266
QKLMG*TCCMLG*KSPQFCSTPLSFWFSLNMEK *VSMAPGWRGVPRPTWLMRYWL LA
Sbjct: 515 QKLMG*TCCMLG*KSPQFCSTPLSFWFSLNMEKT*VSMAPGWRGVPRPTWLMRYWL*ILA 336
Query: 265 LAGVAWTPPPDGHPLSDTTSGTPEPPFFPMAT*KASTVVSKRFWYP*APSCTTVPEEVKS 86
LAGVA PP DGHPLSDTTS T EPP MA *KASTVVS RFWYP* PS TTVP+ VKS
Sbjct: 335 LAGVAAVPPADGHPLSDTTSFTLEPPCLAMAV*KASTVVSNRFWYP*EPSWTTVPDAVKS 156
Query: 85 A*LMSMALGLYAQARYG*MLAMSGDPVR 2
A*LMSMALGL AQARYG*MLAMSG PVR
Sbjct: 155 A*LMSMALGL*AQARYG*MLAMSGAPVR 72
Score = 80.3 bits (169), Expect(3) = 2e-024
Identities = 33/35 (94%), Positives = 34/35 (97%)
Frame = +2 / +3
Query: 341 LPLLHVQREPEGERRGAELGALLPQHAARLPHQLL 445
L LLHVQREPEG+RRGAELGALLPQHAARLPHQLL
Sbjct: 411 LRLLHVQREPEGQRRGAELGALLPQHAARLPHQLL 515
Score = 73.9 bits (155), Expect(3) = 5e-030
Identities = 31/35 (88%), Positives = 31/35 (88%)
Frame = -1 / -2
Query: 107 GAGGGEERVAHVHGAGVVCPGQVRVDVGHERRPGA 3
GAG GEERVAHVHGA VV PGQVRVDVGHERR GA
Sbjct: 177 GAGRGEERVAHVHGARVVGPGQVRVDVGHERRAGA 73
Score = 59.3 bits (123), Expect(3) = 5e-030
Identities = 26/38 (68%), Positives = 27/38 (71%)
Frame = -1 / -2
Query: 290 EVLVVHPRVGRRGLDAAAGRPPALGHHERHAGAAVLSH 177
EVLVV P VGR AA RPPALGHH+ H GAAVL H
Sbjct: 360 EVLVVDPGVGRGRRRAAG*RPPALGHHQLHVGAAVLGH 247
Score = 51.5 bits (106), Expect(3) = 2e-024
Identities = 18/21 (85%), Positives = 20/21 (95%)
Frame = +2 / +3
Query: 2 PHRVAAHGQHLPVPGLGIQPQ 64
PHR AAHGQHLPVPGLG+QP+
Sbjct: 72 PHRRAAHGQHLPVPGLGLQPE 134
Score = 35.9 bits (72), Expect(3) = 5e-030
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = -1 / -2
Query: 461 VNGSSSEADGVDVLHVGV 408
V +SSEADGVDVLHVGV
Sbjct: 531 VAATSSEADGVDVLHVGV 478
Score = 21.7 bits (41), Expect(3) = 2e-024
Identities = 7/13 (53%), Positives = 7/13 (53%)
Frame = +1 / +2
Query: 178 WERTAAPACRSWC 216
W TAAP WC
Sbjct: 248 WPSTAAPT*SWWC 286
>gb|AV926710.1|AV926710 AV926710 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd23h17 5', mRNA sequence
Length = 690
Score = 339 bits (734), Expect = 2e-092
Identities = 133/148 (89%), Positives = 141/148 (95%)
Frame = +3 / +2
Query: 3 RTGSPLMANIYPYLAWAYNPSAMDMSYALFTSSGTVVQDGAYGYQNLFDTTVDAFYVAMG 182
RTG+PLMANIYPYLAWAYNPSAMDMSYALFT+SGTVVQDG+YGYQNLFDTTVDAFY AM
Sbjct: 164 RTGAPLMANIYPYLAWAYNPSAMDMSYALFTASGTVVQDGSYGYQNLFDTTVDAFYTAMA 343
Query: 183 KNGGSGVPLVVSESGWPSGGGVQATPANARVYNQYLINHVGRGTPRHPGAIETYLFSMFN 362
K+GGS V LVVSESGWPS GG ATPANAR+YNQYLINHVGRGTPRHPGAIETY+FSMFN
Sbjct: 344 KHGGSNVKLVVSESGWPSAGGTAATPANARIYNQYLINHVGRGTPRHPGAIETYVFSMFN 523
Query: 363 ENQKESGVEQNWGLFYPNMQHVYPISF* 446
ENQK++GVEQNWGLFYPNMQHVYPISF*
Sbjct: 524 ENQKDNGVEQNWGLFYPNMQHVYPISF* 607
Score = 296 bits (640), Expect = 2e-079
Identities = 129/148 (87%), Positives = 130/148 (87%)
Frame = -2 / -1
Query: 445 QKLMG*TCCMLG*KSPQFCSTPLSFWFSLNMEKR*VSMAPGWRGVPRPTWLMRYWLYTLA 266
QKLMG*TCCMLG*KSPQFCSTPLSFWFSLNMEK *VSMAPGWRGVPRPTWLMRYWL LA
Sbjct: 606 QKLMG*TCCMLG*KSPQFCSTPLSFWFSLNMEKT*VSMAPGWRGVPRPTWLMRYWL*ILA 427
Query: 265 LAGVAWTPPPDGHPLSDTTSGTPEPPFFPMAT*KASTVVSKRFWYP*APSCTTVPEEVKS 86
LAGVA PP DGHPLSDTTS T EPP MA *KASTVVS RFWYP* PS TTVP+ VKS
Sbjct: 426 LAGVAAVPPADGHPLSDTTSFTLEPPCLAMAV*KASTVVSNRFWYP*EPSWTTVPDAVKS 247
Query: 85 A*LMSMALGLYAQARYG*MLAMSGDPVR 2
A*LMSMALGL AQARYG*MLAMSG PVR
Sbjct: 246 A*LMSMALGL*AQARYG*MLAMSGAPVR 163
Score = 80.3 bits (169), Expect(3) = 2e-024
Identities = 33/35 (94%), Positives = 34/35 (97%)
Frame = +2 / +1
Query: 341 LPLLHVQREPEGERRGAELGALLPQHAARLPHQLL 445
L LLHVQREPEG+RRGAELGALLPQHAARLPHQLL
Sbjct: 502 LRLLHVQREPEGQRRGAELGALLPQHAARLPHQLL 606
Score = 73.9 bits (155), Expect(3) = 5e-030
Identities = 31/35 (88%), Positives = 31/35 (88%)
Frame = -1 / -3
Query: 107 GAGGGEERVAHVHGAGVVCPGQVRVDVGHERRPGA 3
GAG GEERVAHVHGA VV PGQVRVDVGHERR GA
Sbjct: 268 GAGRGEERVAHVHGARVVGPGQVRVDVGHERRAGA 164
Score = 59.3 bits (123), Expect(3) = 5e-030
Identities = 26/38 (68%), Positives = 27/38 (71%)
Frame = -1 / -3
Query: 290 EVLVVHPRVGRRGLDAAAGRPPALGHHERHAGAAVLSH 177
EVLVV P VGR AA RPPALGHH+ H GAAVL H
Sbjct: 451 EVLVVDPGVGRGRRRAAG*RPPALGHHQLHVGAAVLGH 338
Score = 51.5 bits (106), Expect(3) = 2e-024
Identities = 18/21 (85%), Positives = 20/21 (95%)
Frame = +2 / +1
Query: 2 PHRVAAHGQHLPVPGLGIQPQ 64
PHR AAHGQHLPVPGLG+QP+
Sbjct: 163 PHRRAAHGQHLPVPGLGLQPE 225
Score = 35.9 bits (72), Expect(3) = 5e-030
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = -1 / -3
Query: 461 VNGSSSEADGVDVLHVGV 408
V +SSEADGVDVLHVGV
Sbjct: 622 VAATSSEADGVDVLHVGV 569
Score = 21.7 bits (41), Expect(3) = 2e-024
Identities = 7/13 (53%), Positives = 7/13 (53%)
Frame = +1 / +3
Query: 178 WERTAAPACRSWC 216
W TAAP WC
Sbjct: 339 WPSTAAPT*SWWC 377
>gb|BQ465340.1|BQ465340 HU03F15r HU Hordeum vulgare subsp. vulgare cDNA clone HU03F15
5-PRIME, mRNA sequence
Length = 626
Score = 339 bits (734), Expect = 2e-092
Identities = 133/148 (89%), Positives = 141/148 (95%)
Frame = +3 / +3
Query: 3 RTGSPLMANIYPYLAWAYNPSAMDMSYALFTSSGTVVQDGAYGYQNLFDTTVDAFYVAMG 182
RTG+PLMANIYPYLAWAYNPSAMDMSYALFT+SGTVVQDG+YGYQNLFDTTVDAFY AM
Sbjct: 108 RTGAPLMANIYPYLAWAYNPSAMDMSYALFTASGTVVQDGSYGYQNLFDTTVDAFYTAMA 287
Query: 183 KNGGSGVPLVVSESGWPSGGGVQATPANARVYNQYLINHVGRGTPRHPGAIETYLFSMFN 362
K+GGS V LVVSESGWPS GG ATPANAR+YNQYLINHVGRGTPRHPGAIETY+FSMFN
Sbjct: 288 KHGGSNVKLVVSESGWPSAGGTAATPANARIYNQYLINHVGRGTPRHPGAIETYVFSMFN 467
Query: 363 ENQKESGVEQNWGLFYPNMQHVYPISF* 446
ENQK++GVEQNWGLFYPNMQHVYPISF*
Sbjct: 468 ENQKDNGVEQNWGLFYPNMQHVYPISF* 551
Score = 296 bits (640), Expect = 2e-079
Identities = 129/148 (87%), Positives = 130/148 (87%)
Frame = -2 / -2
Query: 445 QKLMG*TCCMLG*KSPQFCSTPLSFWFSLNMEKR*VSMAPGWRGVPRPTWLMRYWLYTLA 266
QKLMG*TCCMLG*KSPQFCSTPLSFWFSLNMEK *VSMAPGWRGVPRPTWLMRYWL LA
Sbjct: 550 QKLMG*TCCMLG*KSPQFCSTPLSFWFSLNMEKT*VSMAPGWRGVPRPTWLMRYWL*ILA 371
Query: 265 LAGVAWTPPPDGHPLSDTTSGTPEPPFFPMAT*KASTVVSKRFWYP*APSCTTVPEEVKS 86
LAGVA PP DGHPLSDTTS T EPP MA *KASTVVS RFWYP* PS TTVP+ VKS
Sbjct: 370 LAGVAAVPPADGHPLSDTTSFTLEPPCLAMAV*KASTVVSNRFWYP*EPSWTTVPDAVKS 191
Query: 85 A*LMSMALGLYAQARYG*MLAMSGDPVR 2
A*LMSMALGL AQARYG*MLAMSG PVR
Sbjct: 190 A*LMSMALGL*AQARYG*MLAMSGAPVR 107
Score = 80.3 bits (169), Expect(3) = 2e-024
Identities = 33/35 (94%), Positives = 34/35 (97%)
Frame = +2 / +2
Query: 341 LPLLHVQREPEGERRGAELGALLPQHAARLPHQLL 445
L LLHVQREPEG+RRGAELGALLPQHAARLPHQLL
Sbjct: 446 LRLLHVQREPEGQRRGAELGALLPQHAARLPHQLL 550
Score = 73.9 bits (155), Expect(3) = 5e-030
Identities = 31/35 (88%), Positives = 31/35 (88%)
Frame = -1 / -1
Query: 107 GAGGGEERVAHVHGAGVVCPGQVRVDVGHERRPGA 3
GAG GEERVAHVHGA VV PGQVRVDVGHERR GA
Sbjct: 212 GAGRGEERVAHVHGARVVGPGQVRVDVGHERRAGA 108
Score = 59.3 bits (123), Expect(3) = 5e-030
Identities = 26/38 (68%), Positives = 27/38 (71%)
Frame = -1 / -1
Query: 290 EVLVVHPRVGRRGLDAAAGRPPALGHHERHAGAAVLSH 177
EVLVV P VGR AA RPPALGHH+ H GAAVL H
Sbjct: 395 EVLVVDPGVGRGRRRAAG*RPPALGHHQLHVGAAVLGH 282
Score = 51.5 bits (106), Expect(3) = 2e-024
Identities = 18/21 (85%), Positives = 20/21 (95%)
Frame = +2 / +2
Query: 2 PHRVAAHGQHLPVPGLGIQPQ 64
PHR AAHGQHLPVPGLG+QP+
Sbjct: 107 PHRRAAHGQHLPVPGLGLQPE 169
Score = 35.9 bits (72), Expect(3) = 5e-030
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = -1 / -1
Query: 461 VNGSSSEADGVDVLHVGV 408
V +SSEADGVDVLHVGV
Sbjct: 566 VAATSSEADGVDVLHVGV 513
Score = 21.7 bits (41), Expect(3) = 2e-024
Identities = 7/13 (53%), Positives = 7/13 (53%)
Frame = +1 / +1
Query: 178 WERTAAPACRSWC 216
W TAAP WC
Sbjct: 283 WPSTAAPT*SWWC 321
>gb|CA018533.1|CA018533 HV08O12r HV Hordeum vulgare subsp. vulgare cDNA clone HV08O12
5-PRIME, mRNA sequence
Length = 645
Score = 339 bits (734), Expect = 2e-092
Identities = 133/148 (89%), Positives = 141/148 (95%)
Frame = +3 / +2
Query: 3 RTGSPLMANIYPYLAWAYNPSAMDMSYALFTSSGTVVQDGAYGYQNLFDTTVDAFYVAMG 182
RTG+PLMANIYPYLAWAYNPSAMDMSYALFT+SGTVVQDG+YGYQNLFDTTVDAFY AM
Sbjct: 191 RTGAPLMANIYPYLAWAYNPSAMDMSYALFTASGTVVQDGSYGYQNLFDTTVDAFYTAMA 370
Query: 183 KNGGSGVPLVVSESGWPSGGGVQATPANARVYNQYLINHVGRGTPRHPGAIETYLFSMFN 362
K+GGS V LVVSESGWPS GG ATPANAR+YNQYLINHVGRGTPRHPGAIETY+FSMFN
Sbjct: 371 KHGGSNVKLVVSESGWPSAGGTAATPANARIYNQYLINHVGRGTPRHPGAIETYVFSMFN 550
Query: 363 ENQKESGVEQNWGLFYPNMQHVYPISF* 446
ENQK++GVEQNWGLFYPNMQHVYPISF*
Sbjct: 551 ENQKDNGVEQNWGLFYPNMQHVYPISF* 634
Score = 296 bits (640), Expect = 2e-079
Identities = 129/148 (87%), Positives = 130/148 (87%)
Frame = -2 / -1
Query: 445 QKLMG*TCCMLG*KSPQFCSTPLSFWFSLNMEKR*VSMAPGWRGVPRPTWLMRYWLYTLA 266
QKLMG*TCCMLG*KSPQFCSTPLSFWFSLNMEK *VSMAPGWRGVPRPTWLMRYWL LA
Sbjct: 633 QKLMG*TCCMLG*KSPQFCSTPLSFWFSLNMEKT*VSMAPGWRGVPRPTWLMRYWL*ILA 454
Query: 265 LAGVAWTPPPDGHPLSDTTSGTPEPPFFPMAT*KASTVVSKRFWYP*APSCTTVPEEVKS 86
LAGVA PP DGHPLSDTTS T EPP MA *KASTVVS RFWYP* PS TTVP+ VKS
Sbjct: 453 LAGVAAVPPADGHPLSDTTSFTLEPPCLAMAV*KASTVVSNRFWYP*EPSWTTVPDAVKS 274
Query: 85 A*LMSMALGLYAQARYG*MLAMSGDPVR 2
A*LMSMALGL AQARYG*MLAMSG PVR
Sbjct: 273 A*LMSMALGL*AQARYG*MLAMSGAPVR 190
Score = 80.3 bits (169), Expect(3) = 2e-024
Identities = 33/35 (94%), Positives = 34/35 (97%)
Frame = +2 / +1
Query: 341 LPLLHVQREPEGERRGAELGALLPQHAARLPHQLL 445
L LLHVQREPEG+RRGAELGALLPQHAARLPHQLL
Sbjct: 529 LRLLHVQREPEGQRRGAELGALLPQHAARLPHQLL 633
Score = 73.9 bits (155), Expect(3) = 1e-029
Identities = 31/35 (88%), Positives = 31/35 (88%)
Frame = -1 / -3
Query: 107 GAGGGEERVAHVHGAGVVCPGQVRVDVGHERRPGA 3
GAG GEERVAHVHGA VV PGQVRVDVGHERR GA
Sbjct: 295 GAGRGEERVAHVHGARVVGPGQVRVDVGHERRAGA 191
Score = 59.3 bits (123), Expect(3) = 1e-029
Identities = 26/38 (68%), Positives = 27/38 (71%)
Frame = -1 / -3
Query: 290 EVLVVHPRVGRRGLDAAAGRPPALGHHERHAGAAVLSH 177
EVLVV P VGR AA RPPALGHH+ H GAAVL H
Sbjct: 478 EVLVVDPGVGRGRRRAAG*RPPALGHHQLHVGAAVLGH 365
Score = 51.5 bits (106), Expect(3) = 2e-024
Identities = 18/21 (85%), Positives = 20/21 (95%)
Frame = +2 / +1
Query: 2 PHRVAAHGQHLPVPGLGIQPQ 64
PHR AAHGQHLPVPGLG+QP+
Sbjct: 190 PHRRAAHGQHLPVPGLGLQPE 252
Score = 35.0 bits (70), Expect(3) = 1e-029
Identities = 14/15 (93%), Positives = 15/15 (100%)
Frame = -1 / -3
Query: 452 SSSEADGVDVLHVGV 408
+SSEADGVDVLHVGV
Sbjct: 640 TSSEADGVDVLHVGV 596
Score = 21.7 bits (41), Expect(3) = 2e-024
Identities = 7/13 (53%), Positives = 7/13 (53%)
Frame = +1 / +3
Query: 178 WERTAAPACRSWC 216
W TAAP WC
Sbjct: 366 WPSTAAPT*SWWC 404
>emb|X52572.1|HVBDG Barley DNA for (1-3,1-4)-beta-D-glucanase (EC 3.2.1.73)
Length = 6260
Score = 339 bits (734), Expect = 2e-092
Identities = 133/148 (89%), Positives = 141/148 (95%)
Frame = +3 / +3
Query: 3 RTGSPLMANIYPYLAWAYNPSAMDMSYALFTSSGTVVQDGAYGYQNLFDTTVDAFYVAMG 182
RTG+PLMANIYPYLAWAYNPSAMDMSYALFT+SGTVVQDG+YGYQNLFDTTVDAFY AM
Sbjct: 5028 RTGAPLMANIYPYLAWAYNPSAMDMSYALFTASGTVVQDGSYGYQNLFDTTVDAFYTAMA 5207
Query: 183 KNGGSGVPLVVSESGWPSGGGVQATPANARVYNQYLINHVGRGTPRHPGAIETYLFSMFN 362
K+GGS V LVVSESGWPS GG ATPANAR+YNQYLINHVGRGTPRHPGAIETY+FSMFN
Sbjct: 5208 KHGGSNVKLVVSESGWPSAGGTAATPANARIYNQYLINHVGRGTPRHPGAIETYVFSMFN 5387
Query: 363 ENQKESGVEQNWGLFYPNMQHVYPISF* 446
ENQK++GVEQNWGLFYPNMQHVYPISF*
Sbjct: 5388 ENQKDNGVEQNWGLFYPNMQHVYPISF* 5471
Score = 296 bits (640), Expect = 2e-079
Identities = 129/148 (87%), Positives = 130/148 (87%)
Frame = -2 / -2
Query: 445 QKLMG*TCCMLG*KSPQFCSTPLSFWFSLNMEKR*VSMAPGWRGVPRPTWLMRYWLYTLA 266
QKLMG*TCCMLG*KSPQFCSTPLSFWFSLNMEK *VSMAPGWRGVPRPTWLMRYWL LA
Sbjct: 5470 QKLMG*TCCMLG*KSPQFCSTPLSFWFSLNMEKT*VSMAPGWRGVPRPTWLMRYWL*ILA 5291
Query: 265 LAGVAWTPPPDGHPLSDTTSGTPEPPFFPMAT*KASTVVSKRFWYP*APSCTTVPEEVKS 86
LAGVA PP DGHPLSDTTS T EPP MA *KASTVVS RFWYP* PS TTVP+ VKS
Sbjct: 5290 LAGVAAVPPADGHPLSDTTSFTLEPPCLAMAV*KASTVVSNRFWYP*EPSWTTVPDAVKS 5111
Query: 85 A*LMSMALGLYAQARYG*MLAMSGDPVR 2
A*LMSMALGL AQARYG*MLAMSG PVR
Sbjct: 5110 A*LMSMALGL*AQARYG*MLAMSGAPVR 5027
Score = 80.3 bits (169), Expect(2) = 2e-022
Identities = 33/35 (94%), Positives = 34/35 (97%)
Frame = +2 / +2
Query: 341 LPLLHVQREPEGERRGAELGALLPQHAARLPHQLL 445
L LLHVQREPEG+RRGAELGALLPQHAARLPHQLL
Sbjct: 5366 LRLLHVQREPEGQRRGAELGALLPQHAARLPHQLL 5470
Score = 73.9 bits (155), Expect(3) = 5e-030
Identities = 31/35 (88%), Positives = 31/35 (88%)
Frame = -1 / -1
Query: 107 GAGGGEERVAHVHGAGVVCPGQVRVDVGHERRPGA 3
GAG GEERVAHVHGA VV PGQVRVDVGHERR GA
Sbjct: 5132 GAGRGEERVAHVHGARVVGPGQVRVDVGHERRAGA 5028
Score = 59.3 bits (123), Expect(3) = 5e-030
Identities = 26/38 (68%), Positives = 27/38 (71%)
Frame = -1 / -1
Query: 290 EVLVVHPRVGRRGLDAAAGRPPALGHHERHAGAAVLSH 177
EVLVV P VGR AA RPPALGHH+ H GAAVL H
Sbjct: 5315 EVLVVDPGVGRGRRRAAG*RPPALGHHQLHVGAAVLGH 5202
Score = 51.5 bits (106), Expect(2) = 2e-022
Identities = 18/21 (85%), Positives = 20/21 (95%)
Frame = +2 / +2
Query: 2 PHRVAAHGQHLPVPGLGIQPQ 64
PHR AAHGQHLPVPGLG+QP+
Sbjct: 5027 PHRRAAHGQHLPVPGLGLQPE 5089
Score = 35.9 bits (72), Expect(3) = 5e-030
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = -1 / -1
Query: 461 VNGSSSEADGVDVLHVGV 408
V +SSEADGVDVLHVGV
Sbjct: 5486 VAATSSEADGVDVLHVGV 5433
>emb|X56775.1|HVGLB1 H.vulgare Glb 1 gene for 1-3,1-4-beta-D-glucanase
Length = 4849
Score = 339 bits (734), Expect = 2e-092
Identities = 133/148 (89%), Positives = 141/148 (95%)
Frame = +3 / +1
Query: 3 RTGSPLMANIYPYLAWAYNPSAMDMSYALFTSSGTVVQDGAYGYQNLFDTTVDAFYVAMG 182
RTG+PLMANIYPYLAWAYNPSAMDMSYALFT+SGTVVQDG+YGYQNLFDTTVDAFY AM
Sbjct: 4021 RTGAPLMANIYPYLAWAYNPSAMDMSYALFTASGTVVQDGSYGYQNLFDTTVDAFYTAMA 4200
Query: 183 KNGGSGVPLVVSESGWPSGGGVQATPANARVYNQYLINHVGRGTPRHPGAIETYLFSMFN 362
K+GGS V LVVSESGWPS GG ATPANAR+YNQYLINHVGRGTPRHPGAIETY+FSMFN
Sbjct: 4201 KHGGSNVKLVVSESGWPSAGGTAATPANARIYNQYLINHVGRGTPRHPGAIETYVFSMFN 4380
Query: 363 ENQKESGVEQNWGLFYPNMQHVYPISF* 446
ENQK++GVEQNWGLFYPNMQHVYPISF*
Sbjct: 4381 ENQKDNGVEQNWGLFYPNMQHVYPISF* 4464
Score = 297 bits (643), Expect = 6e-080
Identities = 130/148 (87%), Positives = 130/148 (87%)
Frame = -2 / -3
Query: 445 QKLMG*TCCMLG*KSPQFCSTPLSFWFSLNMEKR*VSMAPGWRGVPRPTWLMRYWLYTLA 266
QKLMG*TCCMLG*KSPQFCSTPLSFWFSLNMEK *VSMAPGWRGVPRPTWLMRYWL LA
Sbjct: 4463 QKLMG*TCCMLG*KSPQFCSTPLSFWFSLNMEKT*VSMAPGWRGVPRPTWLMRYWL*ILA 4284
Query: 265 LAGVAWTPPPDGHPLSDTTSGTPEPPFFPMAT*KASTVVSKRFWYP*APSCTTVPEEVKS 86
LAGVA PP DGHPLSDTTS T EPP MA *KASTVVS RFWYP* PS TTVPE VKS
Sbjct: 4283 LAGVAAVPPADGHPLSDTTSFTLEPPCLAMAV*KASTVVSNRFWYP*EPSWTTVPEAVKS 4104
Query: 85 A*LMSMALGLYAQARYG*MLAMSGDPVR 2
A*LMSMALGL AQARYG*MLAMSG PVR
Sbjct: 4103 A*LMSMALGL*AQARYG*MLAMSGAPVR 4020
Score = 80.3 bits (169), Expect(2) = 1e-022
Identities = 33/35 (94%), Positives = 34/35 (97%)
Frame = +2 / +3
Query: 341 LPLLHVQREPEGERRGAELGALLPQHAARLPHQLL 445
L LLHVQREPEG+RRGAELGALLPQHAARLPHQLL
Sbjct: 4359 LRLLHVQREPEGQRRGAELGALLPQHAARLPHQLL 4463
Score = 77.6 bits (163), Expect(3) = 4e-031
Identities = 32/35 (91%), Positives = 32/35 (91%)
Frame = -1 / -2
Query: 107 GAGGGEERVAHVHGAGVVCPGQVRVDVGHERRPGA 3
GAGGGEERVAHVHGA VV PGQVRVDVGHERR GA
Sbjct: 4125 GAGGGEERVAHVHGARVVGPGQVRVDVGHERRAGA 4021
Score = 59.3 bits (123), Expect(3) = 4e-031
Identities = 26/38 (68%), Positives = 27/38 (71%)
Frame = -1 / -2
Query: 290 EVLVVHPRVGRRGLDAAAGRPPALGHHERHAGAAVLSH 177
EVLVV P VGR AA RPPALGHH+ H GAAVL H
Sbjct: 4308 EVLVVDPGVGRGRRRAAG*RPPALGHHQLHVGAAVLGH 4195
Score = 51.5 bits (106), Expect(2) = 1e-022
Identities = 18/21 (85%), Positives = 20/21 (95%)
Frame = +2 / +3
Query: 2 PHRVAAHGQHLPVPGLGIQPQ 64
PHR AAHGQHLPVPGLG+QP+
Sbjct: 4020 PHRRAAHGQHLPVPGLGLQPE 4082
Score = 35.9 bits (72), Expect(3) = 4e-031
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = -1 / -2
Query: 461 VNGSSSEADGVDVLHVGV 408
V +SSEADGVDVLHVGV
Sbjct: 4479 VAATSSEADGVDVLHVGV 4426
>emb|X56260.1|HVGLUEND Barley DNA for (1,3;1,4)-beta-glucanase.(EC number 3.2.1.73)
Length = 4643
Score = 339 bits (734), Expect = 2e-092
Identities = 133/148 (89%), Positives = 141/148 (95%)
Frame = +3 / +3
Query: 3 RTGSPLMANIYPYLAWAYNPSAMDMSYALFTSSGTVVQDGAYGYQNLFDTTVDAFYVAMG 182
RTG+PLMANIYPYLAWAYNPSAMDMSYALFT+SGTVVQDG+YGYQNLFDTTVDAFY AM
Sbjct: 3621 RTGAPLMANIYPYLAWAYNPSAMDMSYALFTASGTVVQDGSYGYQNLFDTTVDAFYTAMA 3800
Query: 183 KNGGSGVPLVVSESGWPSGGGVQATPANARVYNQYLINHVGRGTPRHPGAIETYLFSMFN 362
K+GGS V LVVSESGWPS GG ATPANAR+YNQYLINHVGRGTPRHPGAIETY+FSMFN
Sbjct: 3801 KHGGSNVKLVVSESGWPSAGGTAATPANARIYNQYLINHVGRGTPRHPGAIETYVFSMFN 3980
Query: 363 ENQKESGVEQNWGLFYPNMQHVYPISF* 446
ENQK++GVEQNWGLFYPNMQHVYPISF*
Sbjct: 3981 ENQKDNGVEQNWGLFYPNMQHVYPISF* 4064
Score = 297 bits (643), Expect = 6e-080
Identities = 130/148 (87%), Positives = 130/148 (87%)
Frame = -2 / -2
Query: 445 QKLMG*TCCMLG*KSPQFCSTPLSFWFSLNMEKR*VSMAPGWRGVPRPTWLMRYWLYTLA 266
QKLMG*TCCMLG*KSPQFCSTPLSFWFSLNMEK *VSMAPGWRGVPRPTWLMRYWL LA
Sbjct: 4063 QKLMG*TCCMLG*KSPQFCSTPLSFWFSLNMEKT*VSMAPGWRGVPRPTWLMRYWL*ILA 3884
Query: 265 LAGVAWTPPPDGHPLSDTTSGTPEPPFFPMAT*KASTVVSKRFWYP*APSCTTVPEEVKS 86
LAGVA PP DGHPLSDTTS T EPP MA *KASTVVS RFWYP* PS TTVPE VKS
Sbjct: 3883 LAGVAAVPPADGHPLSDTTSFTLEPPCLAMAV*KASTVVSNRFWYP*EPSWTTVPEAVKS 3704
Query: 85 A*LMSMALGLYAQARYG*MLAMSGDPVR 2
A*LMSMALGL AQARYG*MLAMSG PVR
Sbjct: 3703 A*LMSMALGL*AQARYG*MLAMSGAPVR 3620
Score = 80.3 bits (169), Expect(2) = 1e-022
Identities = 33/35 (94%), Positives = 34/35 (97%)
Frame = +2 / +2
Query: 341 LPLLHVQREPEGERRGAELGALLPQHAARLPHQLL 445
L LLHVQREPEG+RRGAELGALLPQHAARLPHQLL
Sbjct: 3959 LRLLHVQREPEGQRRGAELGALLPQHAARLPHQLL 4063
Score = 77.6 bits (163), Expect(3) = 4e-031
Identities = 32/35 (91%), Positives = 32/35 (91%)
Frame = -1 / -1
Query: 107 GAGGGEERVAHVHGAGVVCPGQVRVDVGHERRPGA 3
GAGGGEERVAHVHGA VV PGQVRVDVGHERR GA
Sbjct: 3725 GAGGGEERVAHVHGARVVGPGQVRVDVGHERRAGA 3621
Score = 59.3 bits (123), Expect(3) = 4e-031
Identities = 26/38 (68%), Positives = 27/38 (71%)
Frame = -1 / -1
Query: 290 EVLVVHPRVGRRGLDAAAGRPPALGHHERHAGAAVLSH 177
EVLVV P VGR AA RPPALGHH+ H GAAVL H
Sbjct: 3908 EVLVVDPGVGRGRRRAAG*RPPALGHHQLHVGAAVLGH 3795
Score = 51.5 bits (106), Expect(2) = 1e-022
Identities = 18/21 (85%), Positives = 20/21 (95%)
Frame = +2 / +2
Query: 2 PHRVAAHGQHLPVPGLGIQPQ 64
PHR AAHGQHLPVPGLG+QP+
Sbjct: 3620 PHRRAAHGQHLPVPGLGLQPE 3682
Score = 35.9 bits (72), Expect(3) = 4e-031
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = -1 / -1
Query: 461 VNGSSSEADGVDVLHVGV 408
V +SSEADGVDVLHVGV
Sbjct: 4079 VAATSSEADGVDVLHVGV 4026
>gb|CB884203.1|CB884203 HV10H06u HV Hordeum vulgare subsp. vulgare cDNA clone HV10H06
3-PRIME, mRNA sequence
Length = 557
Score = 310 bits (671), Expect = 8e-084
Identities = 121/139 (87%), Positives = 131/139 (94%)
Frame = +3 / -2
Query: 39 YLAWAYNPSAMDMSYALFTSSGTVVQDGAYGYQNLFDTTVDAFYVAMGKNGGSGVPLVVS 218
YLAWAYNPSAMDM YALF +SGTVV+DGAYGYQNLFDTTVDAFY AMGK+GGS V LVVS
Sbjct: 556 YLAWAYNPSAMDMGYALFNASGTVVRDGAYGYQNLFDTTVDAFYTAMGKHGGSSVKLVVS 377
Query: 219 ESGWPSGGGVQATPANARVYNQYLINHVGRGTPRHPGAIETYLFSMFNENQKESGVEQNW 398
ESGWPSGGG ATPANAR YNQ+LINHVGRGTPRHPGAIETY+F+MFNENQK+SGVEQNW
Sbjct: 376 ESGWPSGGGTAATPANARFYNQHLINHVGRGTPRHPGAIETYIFAMFNENQKDSGVEQNW 197
Query: 399 GLFYPNMQHVYPISF*RTT 455
GLFYPNMQHVYPI+F*R++
Sbjct: 196 GLFYPNMQHVYPINF*RSS 140
Score = 270 bits (584), Expect = 8e-072
Identities = 116/136 (85%), Positives = 118/136 (86%)
Frame = -2 / +3
Query: 445 QKLMG*TCCMLG*KSPQFCSTPLSFWFSLNMEKR*VSMAPGWRGVPRPTWLMRYWLYTLA 266
QKLMG*TCCMLG*KSPQFCSTPLSFWFSLNM K *VSMAPGWRGVPRPTWLMR WL LA
Sbjct: 150 QKLMG*TCCMLG*KSPQFCSTPLSFWFSLNMAKM*VSMAPGWRGVPRPTWLMRCWL*NLA 329
Query: 265 LAGVAWTPPPDGHPLSDTTSGTPEPPFFPMAT*KASTVVSKRFWYP*APSCTTVPEEVKS 86
LAGVA PPPDGHPLSDTTS T EPP PMA *KASTVVS RFWYP*APS TTVP+ +K
Sbjct: 330 LAGVAAVPPPDGHPLSDTTSFTLEPPCLPMAV*KASTVVSNRFWYP*APSLTTVPDALKR 509
Query: 85 A*LMSMALGLYAQARY 38
A* MSMALGL AQARY
Sbjct: 510 A*PMSMALGL*AQARY 557
>gb|BF253425.2|BF253425 HVSMEf0001G05f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0001G05f, mRNA sequence
Length = 856
Score = 297 bits (643), Expect(2) = 2e-082
Identities = 115/137 (83%), Positives = 126/137 (91%)
Frame = +3 / +3
Query: 3 RTGSPLMANIYPYLAWAYNPSAMDMSYALFTSSGTVVQDGAYGYQNLFDTTVDAFYVAMG 182
RTG+PLMANIYPYLAWAYNPSAMDMSY LFT+ GTVVQDG+YGYQNLF+TTVDAFY AM
Sbjct: 102 RTGAPLMANIYPYLAWAYNPSAMDMSYTLFTAYGTVVQDGSYGYQNLFNTTVDAFYTAMA 281
Query: 183 KNGGSGVPLVVSESGWPSGGGVQATPANARVYNQYLINHVGRGTPRHPGAIETYLFSMFN 362
K+GGS V LVVSESGWPS GG +ATPANA +YNQYLINHVGRGTPRHP AIETY+FSMFN
Sbjct: 282 KHGGSNVKLVVSESGWPSTGGTEATPANASIYNQYLINHVGRGTPRHPSAIETYVFSMFN 461
Query: 363 ENQKESGVEQNWGLFYP 413
+N K++GVEQNWGLFYP
Sbjct: 462 DNHKDNGVEQNWGLFYP 512
Score = 246 bits (531), Expect(2) = 3e-068
Identities = 112/138 (81%), Positives = 113/138 (81%)
Frame = -2 / -1
Query: 415 LG*KSPQFCSTPLSFWFSLNMEKR*VSMAPGWRGVPRPTWLMRYWLYTLALAGVAWTPPP 236
+G*KSPQFCSTPLS W SLNMEK *VSMA G RGVPRPTWLMRYWL LALAGVA PP
Sbjct: 514 VG*KSPQFCSTPLSLWLSLNMEKT*VSMALG*RGVPRPTWLMRYWL*ILALAGVASVPPV 335
Query: 235 DGHPLSDTTSGTPEPPFFPMAT*KASTVVSKRFWYP*APSCTTVPEEVKSA*LMSMALGL 56
DGHPLSDTTS T EPP MA *KASTVV RFWYP* PS TTVP VKS *LMSMALGL
Sbjct: 334 DGHPLSDTTSFTLEPPCLAMAV*KASTVVLNRFWYP*EPSWTTVPYAVKSV*LMSMALGL 155
Query: 55 YAQARYG*MLAMSGDPVR 2
AQARYG*MLAMSG PVR
Sbjct: 154 *AQARYG*MLAMSGAPVR 101
Score = 69.8 bits (146), Expect(3) = 3e-025
Identities = 30/35 (85%), Positives = 30/35 (85%)
Frame = -1 / -3
Query: 107 GAGGGEERVAHVHGAGVVCPGQVRVDVGHERRPGA 3
GA GEERVAHVHGA VV PGQVRVDVGHERR GA
Sbjct: 206 GAVRGEERVAHVHGARVVGPGQVRVDVGHERRAGA 102
Score = 57.0 bits (118), Expect(3) = 3e-025
Identities = 25/38 (65%), Positives = 27/38 (71%)
Frame = -1 / -3
Query: 290 EVLVVHPRVGRRGLDAAAGRPPALGHHERHAGAAVLSH 177
EVLVV VGR L +A RPPALGHH+ H GAAVL H
Sbjct: 389 EVLVVDTGVGRGRLRSAG*RPPALGHHQLHVGAAVLGH 276
Score = 33.1 bits (66), Expect(2) = 3e-068
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = -1 / -1
Query: 461 VNGSSSEADGVDVLHVG 411
V +SSEADGVDV+HVG
Sbjct: 559 VAATSSEADGVDVMHVG 509
Score = 29.5 bits (58), Expect(2) = 2e-082
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +3 / +2
Query: 399 GLFYPNMQHVYPISF* 446
G P+M HVYPISF*
Sbjct: 497 GALLPHMHHVYPISF* 544
Score = 26.3 bits (51), Expect(3) = 3e-025
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = -2 / -2
Query: 445 QKLMG*TCCMLG*KSP 398
QKLMG*T CM G ++P
Sbjct: 543 QKLMG*T*CMWGRRAP 496
>gb|BI950595.1|BI950595 HVSMEl0021J13f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0021J13f, mRNA sequence
Length = 543
Score = 293 bits (635), Expect = 7e-079
Identities = 116/130 (89%), Positives = 123/130 (94%)
Frame = +3 / +3
Query: 57 NPSAMDMSYALFTSSGTVVQDGAYGYQNLFDTTVDAFYVAMGKNGGSGVPLVVSESGWPS 236
NPSAMDMSYALFT+SGTVVQDG+YGYQNLFDTTVDAFY AM K+GGS V LVVSESGWPS
Sbjct: 3 NPSAMDMSYALFTASGTVVQDGSYGYQNLFDTTVDAFYTAMAKHGGSNVKLVVSESGWPS 182
Query: 237 GGGVQATPANARVYNQYLINHVGRGTPRHPGAIETYLFSMFNENQKESGVEQNWGLFYPN 416
GG ATPANAR+YNQYLINHVGRGTPRHPGAIETY+FSMFNENQK++GVEQNWGLFYPN
Sbjct: 183 XGGTAATPANARIYNQYLINHVGRGTPRHPGAIETYVFSMFNENQKDNGVEQNWGLFYPN 362
Query: 417 MQHVYPISF* 446
MQHVYPISF*
Sbjct: 363 MQHVYPISF* 392
Score = 263 bits (569), Expect = 9e-070
Identities = 113/130 (86%), Positives = 114/130 (87%)
Frame = -2 / -3
Query: 445 QKLMG*TCCMLG*KSPQFCSTPLSFWFSLNMEKR*VSMAPGWRGVPRPTWLMRYWLYTLA 266
QKLMG*TCCMLG*KSPQFCSTPLSFWFSLNMEK *VSMAPGWRGVPRPTWLMRYWL LA
Sbjct: 391 QKLMG*TCCMLG*KSPQFCSTPLSFWFSLNMEKT*VSMAPGWRGVPRPTWLMRYWL*ILA 212
Query: 265 LAGVAWTPPPDGHPLSDTTSGTPEPPFFPMAT*KASTVVSKRFWYP*APSCTTVPEEVKS 86
LAGVA PP DGHPLSDTTS T EPP MA *KASTVVS RFWYP* PS TTVP+ VKS
Sbjct: 211 LAGVAAVPPXDGHPLSDTTSFTLEPPCLAMAV*KASTVVSNRFWYP*EPSWTTVPDAVKS 32
Query: 85 A*LMSMALGL 56
A*LMSMALGL
Sbjct: 31 A*LMSMALGL 2
>gb|CB877858.1|CB877858 HP06G23T HP Hordeum vulgare subsp. vulgare cDNA clone HP06G23
5-PRIME, mRNA sequence
Length = 688
Score = 291 bits (630), Expect = 4e-078
Identities = 115/129 (89%), Positives = 122/129 (94%)
Frame = +3 / +1
Query: 60 PSAMDMSYALFTSSGTVVQDGAYGYQNLFDTTVDAFYVAMGKNGGSGVPLVVSESGWPSG 239
PSAMDMSYALFT+SGTVVQDG+YGYQNLFDTTVDAFY AM K+GGS V LVVSESGWPS
Sbjct: 25 PSAMDMSYALFTASGTVVQDGSYGYQNLFDTTVDAFYTAMAKHGGSNVKLVVSESGWPSA 204
Query: 240 GGVQATPANARVYNQYLINHVGRGTPRHPGAIETYLFSMFNENQKESGVEQNWGLFYPNM 419
GG ATPANAR+YNQYLINHVGRGTPRHPGAIETY+FSMFNENQK++GVEQNWGLFYPNM
Sbjct: 205 GGTAATPANARIYNQYLINHVGRGTPRHPGAIETYVFSMFNENQKDNGVEQNWGLFYPNM 384
Query: 420 QHVYPISF* 446
QHVYPISF*
Sbjct: 385 QHVYPISF* 411
Score = 262 bits (566), Expect = 2e-069
Identities = 112/129 (86%), Positives = 113/129 (87%)
Frame = -2 / -3
Query: 445 QKLMG*TCCMLG*KSPQFCSTPLSFWFSLNMEKR*VSMAPGWRGVPRPTWLMRYWLYTLA 266
QKLMG*TCCMLG*KSPQFCSTPLSFWFSLNMEK *VSMAPGWRGVPRPTWLMRYWL LA
Sbjct: 410 QKLMG*TCCMLG*KSPQFCSTPLSFWFSLNMEKT*VSMAPGWRGVPRPTWLMRYWL*ILA 231
Query: 265 LAGVAWTPPPDGHPLSDTTSGTPEPPFFPMAT*KASTVVSKRFWYP*APSCTTVPEEVKS 86
LAGVA PP DGHPLSDTTS T EPP MA *KASTVVS RFWYP* PS TTVP+ VKS
Sbjct: 230 LAGVAAVPPADGHPLSDTTSFTLEPPCLAMAV*KASTVVSNRFWYP*EPSWTTVPDAVKS 51
Query: 85 A*LMSMALG 59
A*LMSMALG
Sbjct: 50 A*LMSMALG 24
>gb|BJ546633.1|BJ546633 BJ546633 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak45b03 3', mRNA sequence
Length = 730
Score = 277 bits (599), Expect = 7e-074
Identities = 109/123 (88%), Positives = 116/123 (94%)
Frame = +3 / -2
Query: 78 SYALFTSSGTVVQDGAYGYQNLFDTTVDAFYVAMGKNGGSGVPLVVSESGWPSGGGVQAT 257
SYALFT+SGTVVQDG+YGYQNLFDTTVDAFY AM K+GGS V LVVSESGWPS GG AT
Sbjct: 729 SYALFTASGTVVQDGSYGYQNLFDTTVDAFYTAMAKHGGSNVKLVVSESGWPSAGGTAAT 550
Query: 258 PANARVYNQYLINHVGRGTPRHPGAIETYLFSMFNENQKESGVEQNWGLFYPNMQHVYPI 437
PANAR+YNQYLINHVGRGTPRHPGAIETY+FSMFNENQK++GVEQNWGLFYPNMQHVYPI
Sbjct: 549 PANARIYNQYLINHVGRGTPRHPGAIETYVFSMFNENQKDNGVEQNWGLFYPNMQHVYPI 370
Query: 438 SF* 446
SF*
Sbjct: 369 SF* 361
Score = 249 bits (538), Expect = 2e-065
Identities = 106/123 (86%), Positives = 107/123 (86%)
Frame = -2 / +2
Query: 445 QKLMG*TCCMLG*KSPQFCSTPLSFWFSLNMEKR*VSMAPGWRGVPRPTWLMRYWLYTLA 266
QKLMG*TCCMLG*KSPQFCSTPLSFWFSLNMEK *VSMAPGWRGVPRPTWLMRYWL LA
Sbjct: 362 QKLMG*TCCMLG*KSPQFCSTPLSFWFSLNMEKT*VSMAPGWRGVPRPTWLMRYWL*ILA 541
Query: 265 LAGVAWTPPPDGHPLSDTTSGTPEPPFFPMAT*KASTVVSKRFWYP*APSCTTVPEEVKS 86
LAGVA PP DGHPLSDTTS T EPP MA *KASTVVS RFWYP* PS TTVP+ VKS
Sbjct: 542 LAGVAAVPPADGHPLSDTTSFTLEPPCLAMAV*KASTVVSNRFWYP*EPSWTTVPDAVKS 721
Query: 85 A*L 77
A*L
Sbjct: 722 A*L 730
>gb|BJ545156.1|BJ545156 BJ545156 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak45b03 5', mRNA sequence
Length = 554
Score = 276 bits (597), Expect = 1e-073
Identities = 109/122 (89%), Positives = 115/122 (94%)
Frame = +3 / +1
Query: 3 RTGSPLMANIYPYLAWAYNPSAMDMSYALFTSSGTVVQDGAYGYQNLFDTTVDAFYVAMG 182
RTG+PLMANIYPYLAWAYNPSAMDMSYALFT+SGTVVQDG+YGYQNLFDTTVDAFY AM
Sbjct: 187 RTGAPLMANIYPYLAWAYNPSAMDMSYALFTASGTVVQDGSYGYQNLFDTTVDAFYTAMA 366
Query: 183 KNGGSGVPLVVSESGWPSGGGVQATPANARVYNQYLINHVGRGTPRHPGAIETYLFSMFN 362
K+GGS V LVVSESGWPS GG ATPANAR+YNQYLINHVGRGTPRHPGAIETY+FSMFN
Sbjct: 367 KHGGSNVKLVVSESGWPSAGGTAATPANARIYNQYLINHVGRGTPRHPGAIETYVFSMFN 546
Query: 363 EN 368
EN
Sbjct: 547 EN 552
Score = 236 bits (509), Expect = 2e-061
Identities = 104/123 (84%), Positives = 105/123 (85%)
Frame = -2 / -1
Query: 370 WFSLNMEKR*VSMAPGWRGVPRPTWLMRYWLYTLALAGVAWTPPPDGHPLSDTTSGTPEP 191
WFSLNMEK *VSMAPGWRGVPRPTWLMRYWL LALAGVA PP DGHPLSDTTS T EP
Sbjct: 554 WFSLNMEKT*VSMAPGWRGVPRPTWLMRYWL*ILALAGVAAVPPADGHPLSDTTSFTLEP 375
Query: 190 PFFPMAT*KASTVVSKRFWYP*APSCTTVPEEVKSA*LMSMALGLYAQARYG*MLAMSGD 11
P MA *KASTVVS RFWYP* PS TTVP+ VKSA*LMSMALGL AQARYG*MLAMSG
Sbjct: 374 PCLAMAV*KASTVVSNRFWYP*EPSWTTVPDAVKSA*LMSMALGL*AQARYG*MLAMSGA 195
Query: 10 PVR 2
PVR
Sbjct: 194 PVR 186
Score = 73.9 bits (155), Expect(2) = 1e-024
Identities = 31/35 (88%), Positives = 31/35 (88%)
Frame = -1 / -3
Query: 107 GAGGGEERVAHVHGAGVVCPGQVRVDVGHERRPGA 3
GAG GEERVAHVHGA VV PGQVRVDVGHERR GA
Sbjct: 291 GAGRGEERVAHVHGARVVGPGQVRVDVGHERRAGA 187
Score = 59.3 bits (123), Expect(2) = 1e-024
Identities = 26/38 (68%), Positives = 27/38 (71%)
Frame = -1 / -3
Query: 290 EVLVVHPRVGRRGLDAAAGRPPALGHHERHAGAAVLSH 177
EVLVV P VGR AA RPPALGHH+ H GAAVL H
Sbjct: 474 EVLVVDPGVGRGRRRAAG*RPPALGHHQLHVGAAVLGH 361
>gb|CB884213.1|CB884213 HV14A09u HV Hordeum vulgare subsp. vulgare cDNA clone HV14A09
3-PRIME, mRNA sequence
Length = 556
Score = 266 bits (576), Expect = 1e-070
Identities = 104/120 (86%), Positives = 114/120 (95%)
Frame = +3 / -1
Query: 96 SSGTVVQDGAYGYQNLFDTTVDAFYVAMGKNGGSGVPLVVSESGWPSGGGVQATPANARV 275
+SGTVV+DGAYGYQNLFDTTVDAFY AMGK+GGS V LVVSESGWPSGGG ATPANAR
Sbjct: 553 ASGTVVRDGAYGYQNLFDTTVDAFYTAMGKHGGSSVKLVVSESGWPSGGGTAATPANARF 374
Query: 276 YNQYLINHVGRGTPRHPGAIETYLFSMFNENQKESGVEQNWGLFYPNMQHVYPISF*RTT 455
YNQ+LINHVGRGTPRHPGAIETY+F+MFNENQK+SGVEQNWGLFYPNMQHVYPI+F*R++
Sbjct: 373 YNQHLINHVGRGTPRHPGAIETYIFAMFNENQKDSGVEQNWGLFYPNMQHVYPINF*RSS 194
Score = 243 bits (525), Expect = 1e-063
Identities = 101/116 (87%), Positives = 102/116 (87%)
Frame = -2 / +3
Query: 445 QKLMG*TCCMLG*KSPQFCSTPLSFWFSLNMEKR*VSMAPGWRGVPRPTWLMRYWLYTLA 266
QKLMG*TCCMLG*KSPQFCSTPLSFWFSLNM K *VSMAPGWRGVPRPTWLMR WL LA
Sbjct: 204 QKLMG*TCCMLG*KSPQFCSTPLSFWFSLNMAKM*VSMAPGWRGVPRPTWLMRCWL*NLA 383
Query: 265 LAGVAWTPPPDGHPLSDTTSGTPEPPFFPMAT*KASTVVSKRFWYP*APSCTTVPE 98
LAGVA PPPDGHPLSDTTS T EPP PMA *KASTVVS RFWYP*APS TTVP+
Sbjct: 384 LAGVAAVPPPDGHPLSDTTSFTLEPPCLPMAV*KASTVVSNRFWYP*APSLTTVPD 551
>gb|BF258566.3|BF258566 HVSMEf0016B09f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0016B09f, mRNA sequence
Length = 773
Score = 261 bits (565), Expect = 3e-069
Identities = 103/121 (85%), Positives = 110/121 (90%)
Frame = +3 / +3
Query: 84 ALFTSSGTVVQDGAYGYQNLFDTTVDAFYVAMGKNGGSGVPLVVSESGWPSGGGVQATPA 263
ALFT+ GTVV DG+YGYQNLFDTTVDAFY AM K+GGS V LVVSESGWPS GG TPA
Sbjct: 3 ALFTAYGTVVHDGSYGYQNLFDTTVDAFYTAMDKHGGSNVKLVVSESGWPSTGGTAVTPA 182
Query: 264 NARVYNQYLINHVGRGTPRHPGAIETYLFSMFNENQKESGVEQNWGLFYPNMQHVYPISF 443
NAR+YNQYLINHVGRGTPRHPGAIETY+F MFNENQK++GVEQNWGLFYPNMQHVYPISF
Sbjct: 183 NARIYNQYLINHVGRGTPRHPGAIETYVFCMFNENQKDNGVEQNWGLFYPNMQHVYPISF 362
Query: 444 * 446
*
Sbjct: 363 * 365
Score = 241 bits (521), Expect = 4e-063
Identities = 102/121 (84%), Positives = 103/121 (85%)
Frame = -2 / -2
Query: 445 QKLMG*TCCMLG*KSPQFCSTPLSFWFSLNMEKR*VSMAPGWRGVPRPTWLMRYWLYTLA 266
QKLMG*TCCMLG*KSPQFCSTPLSFWFSLNM+K *VSMAPGWRGVPRPTWLMRYWL LA
Sbjct: 364 QKLMG*TCCMLG*KSPQFCSTPLSFWFSLNMQKT*VSMAPGWRGVPRPTWLMRYWL*ILA 185
Query: 265 LAGVAWTPPPDGHPLSDTTSGTPEPPFFPMAT*KASTVVSKRFWYP*APSCTTVPEEVKS 86
LAGV PP DGHPLSDTTS T EPP MA *KASTVVS RFWYP* PS TTVP VKS
Sbjct: 184 LAGVTAVPPVDGHPLSDTTSFTLEPPCLSMAV*KASTVVSNRFWYP*EPSWTTVPYAVKS 5
Query: 85 A 83
A
Sbjct: 4 A 2
>gb|BI950008.1|BI950008 HVSMEl0017K22f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0017K22f, mRNA sequence
Length = 449
Score = 261 bits (564), Expect = 5e-069
Identities = 102/115 (88%), Positives = 108/115 (93%)
Frame = +3 / +1
Query: 102 GTVVQDGAYGYQNLFDTTVDAFYVAMGKNGGSGVPLVVSESGWPSGGGVQATPANARVYN 281
GTVVQDG+YGYQNLFDTTVDAFY AM K+GGS V LVVSESGWPS GG ATPANAR+YN
Sbjct: 1 GTVVQDGSYGYQNLFDTTVDAFYTAMAKHGGSNVKLVVSESGWPSAGGTAATPANARIYN 180
Query: 282 QYLINHVGRGTPRHPGAIETYLFSMFNENQKESGVEQNWGLFYPNMQHVYPISF* 446
QYLINHVGRGTPRHPGAIETY+FSMFNENQK++GVEQNWGLFYPNMQHVYPISF*
Sbjct: 181 QYLINHVGRGTPRHPGAIETYVFSMFNENQKDNGVEQNWGLFYPNMQHVYPISF* 345
Score = 235 bits (508), Expect = 2e-061
Identities = 99/114 (86%), Positives = 99/114 (86%)
Frame = -2 / -1
Query: 445 QKLMG*TCCMLG*KSPQFCSTPLSFWFSLNMEKR*VSMAPGWRGVPRPTWLMRYWLYTLA 266
QKLMG*TCCMLG*KSPQFCSTPLSFWFSLNMEK *VSMAPGWRGVPRPTWLMRYWL LA
Sbjct: 344 QKLMG*TCCMLG*KSPQFCSTPLSFWFSLNMEKT*VSMAPGWRGVPRPTWLMRYWL*ILA 165
Query: 265 LAGVAWTPPPDGHPLSDTTSGTPEPPFFPMAT*KASTVVSKRFWYP*APSCTTV 104
LAGVA PP DGHPLSDTTS T EPP MA *KASTVVS RFWYP* PS TTV
Sbjct: 164 LAGVAAVPPADGHPLSDTTSFTLEPPCLAMAV*KASTVVSNRFWYP*EPSWTTV 3
>gb|BI950007.1|BI950007 HVSMEl0017K20f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0017K20f, mRNA sequence
Length = 449
Score = 257 bits (555), Expect = 8e-068
Identities = 101/115 (87%), Positives = 107/115 (93%)
Frame = +3 / +1
Query: 102 GTVVQDGAYGYQNLFDTTVDAFYVAMGKNGGSGVPLVVSESGWPSGGGVQATPANARVYN 281
GTVVQDG+YGYQNLF TTVDAFY AM K+GGS V LVVSESGWPS GG ATPANAR+YN
Sbjct: 1 GTVVQDGSYGYQNLFYTTVDAFYTAMAKHGGSNVKLVVSESGWPSAGGTAATPANARIYN 180
Query: 282 QYLINHVGRGTPRHPGAIETYLFSMFNENQKESGVEQNWGLFYPNMQHVYPISF* 446
QYLINHVGRGTPRHPGAIETY+FSMFNENQK++GVEQNWGLFYPNMQHVYPISF*
Sbjct: 181 QYLINHVGRGTPRHPGAIETYVFSMFNENQKDNGVEQNWGLFYPNMQHVYPISF* 345
Score = 232 bits (500), Expect = 3e-060
Identities = 98/114 (85%), Positives = 98/114 (85%)
Frame = -2 / -1
Query: 445 QKLMG*TCCMLG*KSPQFCSTPLSFWFSLNMEKR*VSMAPGWRGVPRPTWLMRYWLYTLA 266
QKLMG*TCCMLG*KSPQFCSTPLSFWFSLNMEK *VSMAPGWRGVPRPTWLMRYWL LA
Sbjct: 344 QKLMG*TCCMLG*KSPQFCSTPLSFWFSLNMEKT*VSMAPGWRGVPRPTWLMRYWL*ILA 165
Query: 265 LAGVAWTPPPDGHPLSDTTSGTPEPPFFPMAT*KASTVVSKRFWYP*APSCTTV 104
LAGVA PP DGHPLSDTTS T EPP MA *KASTVV RFWYP* PS TTV
Sbjct: 164 LAGVAAVPPADGHPLSDTTSFTLEPPCLAMAV*KASTVV*NRFWYP*EPSWTTV 3
>gb|BG415255.2|BG415255 HVSMEk0005L24f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0005L24f, mRNA sequence
Length = 626
Score = 256 bits (554), Expect = 1e-067
Identities = 101/118 (85%), Positives = 107/118 (90%)
Frame = +3 / +1
Query: 93 TSSGTVVQDGAYGYQNLFDTTVDAFYVAMGKNGGSGVPLVVSESGWPSGGGVQATPANAR 272
T+SGTVVQDG+YGYQNLFDTTVD FY AM K GGS V LVVSESGWPS GG ATPANAR
Sbjct: 4 TASGTVVQDGSYGYQNLFDTTVDPFYTAMAKRGGSNVKLVVSESGWPSAGGTAATPANAR 183
Query: 273 VYNQYLINHVGRGTPRHPGAIETYLFSMFNENQKESGVEQNWGLFYPNMQHVYPISF* 446
+YNQ LINHVGRGTPRHPGAIETY+FSMFNENQK++GVE NWGLFYPNMQHVYPISF*
Sbjct: 184 IYNQSLINHVGRGTPRHPGAIETYVFSMFNENQKDNGVEHNWGLFYPNMQHVYPISF* 357
Score = 229 bits (495), Expect = 2e-059
Identities = 97/118 (82%), Positives = 98/118 (83%)
Frame = -2 / -1
Query: 445 QKLMG*TCCMLG*KSPQFCSTPLSFWFSLNMEKR*VSMAPGWRGVPRPTWLMRYWLYTLA 266
QKLMG*TCCM G*KSPQ CSTPLSFWFSLNMEK *VSMAPGWRGVPRPTWLMR WL LA
Sbjct: 356 QKLMG*TCCMFG*KSPQLCSTPLSFWFSLNMEKT*VSMAPGWRGVPRPTWLMRDWL*ILA 177
Query: 265 LAGVAWTPPPDGHPLSDTTSGTPEPPFFPMAT*KASTVVSKRFWYP*APSCTTVPEEV 92
LAGVA PP DGHPLSDTTS T EPP MA *K STVVS RFWYP* PS TTVP+ V
Sbjct: 176 LAGVAAVPPADGHPLSDTTSFTLEPPRLAMAV*KGSTVVSNRFWYP*EPSWTTVPDAV 3
>gb|AV923914.1|AV923914 AV923914 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd20b23 5', mRNA sequence
Length = 520
Score = 253 bits (546), Expect = 1e-066
Identities = 100/112 (89%), Positives = 105/112 (93%)
Frame = +3 / +2
Query: 3 RTGSPLMANIYPYLAWAYNPSAMDMSYALFTSSGTVVQDGAYGYQNLFDTTVDAFYVAMG 182
RTG+PLMANIYPYLAWAYNPSAMDMSYALFT+SGTVVQDG+YGYQNLFDTTVDAFY AM
Sbjct: 185 RTGAPLMANIYPYLAWAYNPSAMDMSYALFTASGTVVQDGSYGYQNLFDTTVDAFYTAMA 364
Query: 183 KNGGSGVPLVVSESGWPSGGGVQATPANARVYNQYLINHVGRGTPRHPGAIE 338
K+GGS V LVVSESGWPS GG ATPANAR+YNQYLINHVGRGTPRHPGAIE
Sbjct: 365 KHGGSNVKLVVSESGWPSAGGTAATPANARIYNQYLINHVGRGTPRHPGAIE 520
Score = 213 bits (459), Expect = 1e-054
Identities = 94/112 (83%), Positives = 95/112 (84%)
Frame = -2 / -2
Query: 337 SMAPGWRGVPRPTWLMRYWLYTLALAGVAWTPPPDGHPLSDTTSGTPEPPFFPMAT*KAS 158
SMAPGWRGVPRPTWLMRYWL LALAGVA PP DGHPLSDTTS T EPP MA *KAS
Sbjct: 519 SMAPGWRGVPRPTWLMRYWL*ILALAGVAAVPPADGHPLSDTTSFTLEPPCLAMAV*KAS 340
Query: 157 TVVSKRFWYP*APSCTTVPEEVKSA*LMSMALGLYAQARYG*MLAMSGDPVR 2
TVVS RFWYP* PS TTVP+ VKSA*LMSMALGL AQARYG*MLAMSG PVR
Sbjct: 339 TVVSNRFWYP*EPSWTTVPDAVKSA*LMSMALGL*AQARYG*MLAMSGAPVR 184
Score = 73.9 bits (155), Expect(2) = 1e-024
Identities = 31/35 (88%), Positives = 31/35 (88%)
Frame = -1 / -1
Query: 107 GAGGGEERVAHVHGAGVVCPGQVRVDVGHERRPGA 3
GAG GEERVAHVHGA VV PGQVRVDVGHERR GA
Sbjct: 289 GAGRGEERVAHVHGARVVGPGQVRVDVGHERRAGA 185
Score = 59.3 bits (123), Expect(2) = 1e-024
Identities = 26/38 (68%), Positives = 27/38 (71%)
Frame = -1 / -1
Query: 290 EVLVVHPRVGRRGLDAAAGRPPALGHHERHAGAAVLSH 177
EVLVV P VGR AA RPPALGHH+ H GAAVL H
Sbjct: 472 EVLVVDPGVGRGRRRAAG*RPPALGHHQLHVGAAVLGH 359
>gb|CK125397.1|CK125397 BES1824107o07 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010O077 5-PRIME, mRNA sequence
Length = 716
Score = 246 bits (531), Expect = 2e-064
Identities = 96/108 (88%), Positives = 101/108 (93%)
Frame = +3 / +1
Query: 123 AYGYQNLFDTTVDAFYVAMGKNGGSGVPLVVSESGWPSGGGVQATPANARVYNQYLINHV 302
AYGYQNLFDTTVDAFY AM K+GGS V LVVSESGWPS GG ATPANAR+YNQYLINHV
Sbjct: 16 AYGYQNLFDTTVDAFYTAMAKHGGSNVKLVVSESGWPSAGGTAATPANARIYNQYLINHV 195
Query: 303 GRGTPRHPGAIETYLFSMFNENQKESGVEQNWGLFYPNMQHVYPISF* 446
GRGTPRHPGAIETY+FSMFNENQK++GVEQNWGLFYPNMQHVYPISF*
Sbjct: 196 GRGTPRHPGAIETYVFSMFNENQKDNGVEQNWGLFYPNMQHVYPISF* 339
Score = 227 bits (490), Expect = 7e-059
Identities = 95/108 (87%), Positives = 95/108 (87%)
Frame = -2 / -1
Query: 445 QKLMG*TCCMLG*KSPQFCSTPLSFWFSLNMEKR*VSMAPGWRGVPRPTWLMRYWLYTLA 266
QKLMG*TCCMLG*KSPQFCSTPLSFWFSLNMEK *VSMAPGWRGVPRPTWLMRYWL LA
Sbjct: 338 QKLMG*TCCMLG*KSPQFCSTPLSFWFSLNMEKT*VSMAPGWRGVPRPTWLMRYWL*ILA 159
Query: 265 LAGVAWTPPPDGHPLSDTTSGTPEPPFFPMAT*KASTVVSKRFWYP*A 122
LAGVA PP DGHPLSDTTS T EPP MA *KASTVVS RFWYP*A
Sbjct: 158 LAGVAAVPPADGHPLSDTTSFTLEPPCLAMAV*KASTVVSNRFWYP*A 15
>gb|AV927218.1|AV927218 AV927218 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd1a02 3', mRNA sequence
Length = 691
Score = 244 bits (528), Expect = 4e-064
Identities = 95/108 (87%), Positives = 101/108 (93%)
Frame = +3 / -2
Query: 123 AYGYQNLFDTTVDAFYVAMGKNGGSGVPLVVSESGWPSGGGVQATPANARVYNQYLINHV 302
+YGYQNLFDTTVDAFY AM K+GGS V LVVSESGWPS GG ATPANAR+YNQYLINHV
Sbjct: 690 SYGYQNLFDTTVDAFYTAMAKHGGSNVKLVVSESGWPSAGGTAATPANARIYNQYLINHV 511
Query: 303 GRGTPRHPGAIETYLFSMFNENQKESGVEQNWGLFYPNMQHVYPISF* 446
GRGTPRHPGAIETY+FSMFNENQK++GVEQNWGLFYPNMQHVYPISF*
Sbjct: 510 GRGTPRHPGAIETYVFSMFNENQKDNGVEQNWGLFYPNMQHVYPISF* 367
Score = 225 bits (486), Expect = 3e-058
Identities = 94/107 (87%), Positives = 94/107 (87%)
Frame = -2 / +2
Query: 445 QKLMG*TCCMLG*KSPQFCSTPLSFWFSLNMEKR*VSMAPGWRGVPRPTWLMRYWLYTLA 266
QKLMG*TCCMLG*KSPQFCSTPLSFWFSLNMEK *VSMAPGWRGVPRPTWLMRYWL LA
Sbjct: 368 QKLMG*TCCMLG*KSPQFCSTPLSFWFSLNMEKT*VSMAPGWRGVPRPTWLMRYWL*ILA 547
Query: 265 LAGVAWTPPPDGHPLSDTTSGTPEPPFFPMAT*KASTVVSKRFWYP* 125
LAGVA PP DGHPLSDTTS T EPP MA *KASTVVS RFWYP*
Sbjct: 548 LAGVAAVPPADGHPLSDTTSFTLEPPCLAMAV*KASTVVSNRFWYP* 688
>gb|CB884195.1|CB884195 HV09B24r HV Hordeum vulgare subsp. vulgare cDNA clone HV09B24
5-PRIME, mRNA sequence
Length = 502
Score = 232 bits (500), Expect = 3e-060
Identities = 90/104 (86%), Positives = 98/104 (94%)
Frame = +3 / +3
Query: 144 FDTTVDAFYVAMGKNGGSGVPLVVSESGWPSGGGVQATPANARVYNQYLINHVGRGTPRH 323
FDTTVDAFY AMGK+GGS V LVVSESGWPSGGG ATPANAR YNQ+LINHVGRGTPRH
Sbjct: 12 FDTTVDAFYTAMGKHGGSSVKLVVSESGWPSGGGTAATPANARFYNQHLINHVGRGTPRH 191
Query: 324 PGAIETYLFSMFNENQKESGVEQNWGLFYPNMQHVYPISF*RTT 455
PGAIETY+F+MFNENQK+SGVEQNWGLFYPNMQHVYPI+F*R++
Sbjct: 192 PGAIETYIFAMFNENQKDSGVEQNWGLFYPNMQHVYPINF*RSS 323
Score = 209 bits (451), Expect = 2e-053
Identities = 88/100 (88%), Positives = 88/100 (88%)
Frame = -2 / -1
Query: 445 QKLMG*TCCMLG*KSPQFCSTPLSFWFSLNMEKR*VSMAPGWRGVPRPTWLMRYWLYTLA 266
QKLMG*TCCMLG*KSPQFCSTPLSFWFSLNM K *VSMAPGWRGVPRPTWLMR WL LA
Sbjct: 313 QKLMG*TCCMLG*KSPQFCSTPLSFWFSLNMAKM*VSMAPGWRGVPRPTWLMRCWL*NLA 134
Query: 265 LAGVAWTPPPDGHPLSDTTSGTPEPPFFPMAT*KASTVVS 146
LAGVA PPPDGHPLSDTTS T EPP PMA *KASTVVS
Sbjct: 133 LAGVAAVPPPDGHPLSDTTSFTLEPPCLPMAV*KASTVVS 14
>gb|BI947339.1|BI947339 HVSMEl0005D01f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0005D01f, mRNA sequence
Length = 484
Score = 231 bits (499), Expect = 4e-060
Identities = 92/105 (87%), Positives = 97/105 (92%)
Frame = +3 / +3
Query: 3 RTGSPLMANIYPYLAWAYNPSAMDMSYALFTSSGTVVQDGAYGYQNLFDTTVDAFYVAMG 182
RTG+PLMANIYPYLAWAYNPSAMDMSYALFT+SGTVVQDG+YGYQNLFDTTVDAFY AM
Sbjct: 168 RTGAPLMANIYPYLAWAYNPSAMDMSYALFTASGTVVQDGSYGYQNLFDTTVDAFYTAMA 347
Query: 183 KNGGSGVPLVVSESGWPSGGGVQATPANARVYNQYLINHVGRGTP 317
K+GGS V LVVSESGWPS GG ATPANAR+YNQYLINHV RGTP
Sbjct: 348 KHGGSNVKLVVSESGWPSAGGTAATPANARIYNQYLINHVWRGTP 482
Score = 192 bits (414), Expect = 2e-048
Identities = 87/106 (82%), Positives = 88/106 (83%)
Frame = -2 / -1
Query: 319 RGVPRPTWLMRYWLYTLALAGVAWTPPPDGHPLSDTTSGTPEPPFFPMAT*KASTVVSKR 140
RGVPR TWLMRYWL LALAGVA PP DGHPLSDTTS T EPP MA *KASTVVS R
Sbjct: 484 RGVPRQTWLMRYWL*ILALAGVAAVPPADGHPLSDTTSFTLEPPCLAMAV*KASTVVSNR 305
Query: 139 FWYP*APSCTTVPEEVKSA*LMSMALGLYAQARYG*MLAMSGDPVR 2
FWYP* PS TTVP+ VKSA*LMSMALGL AQARYG*MLAMSG PVR
Sbjct: 304 FWYP*EPSWTTVPDAVKSA*LMSMALGL*AQARYG*MLAMSGAPVR 167
Score = 73.9 bits (155), Expect(2) = 4e-024
Identities = 31/35 (88%), Positives = 31/35 (88%)
Frame = -1 / -3
Query: 107 GAGGGEERVAHVHGAGVVCPGQVRVDVGHERRPGA 3
GAG GEERVAHVHGA VV PGQVRVDVGHERR GA
Sbjct: 272 GAGRGEERVAHVHGARVVGPGQVRVDVGHERRAGA 168
Score = 57.4 bits (119), Expect(2) = 4e-024
Identities = 25/38 (65%), Positives = 26/38 (68%)
Frame = -1 / -3
Query: 290 EVLVVHPRVGRRGLDAAAGRPPALGHHERHAGAAVLSH 177
EVLVV P VGR AA RPPA GHH+ H GAAVL H
Sbjct: 455 EVLVVDPGVGRGRRRAAG*RPPAFGHHQLHVGAAVLGH 342
>gb|AV923570.1|AV923570 AV923570 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd13j20 5', mRNA sequence
Length = 630
Score = 230 bits (497), Expect = 8e-060
Identities = 90/104 (86%), Positives = 96/104 (92%)
Frame = +3 / +2
Query: 135 QNLFDTTVDAFYVAMGKNGGSGVPLVVSESGWPSGGGVQATPANARVYNQYLINHVGRGT 314
+ LFDTTVDAFY AM K+GGS V LVVSESGWPS GG ATPANAR+YNQYLINHVGRGT
Sbjct: 191 KRLFDTTVDAFYTAMAKHGGSNVKLVVSESGWPSAGGTAATPANARIYNQYLINHVGRGT 370
Query: 315 PRHPGAIETYLFSMFNENQKESGVEQNWGLFYPNMQHVYPISF* 446
PRHPGAIETY+FSMFNENQK++GVEQNWGLFYPNMQHVYPISF*
Sbjct: 371 PRHPGAIETYVFSMFNENQKDNGVEQNWGLFYPNMQHVYPISF* 502
Score = 208 bits (449), Expect = 3e-053
Identities = 88/100 (88%), Positives = 88/100 (88%)
Frame = -2 / -1
Query: 445 QKLMG*TCCMLG*KSPQFCSTPLSFWFSLNMEKR*VSMAPGWRGVPRPTWLMRYWLYTLA 266
QKLMG*TCCMLG*KSPQFCSTPLSFWFSLNMEK *VSMAPGWRGVPRPTWLMRYWL LA
Sbjct: 501 QKLMG*TCCMLG*KSPQFCSTPLSFWFSLNMEKT*VSMAPGWRGVPRPTWLMRYWL*ILA 322
Query: 265 LAGVAWTPPPDGHPLSDTTSGTPEPPFFPMAT*KASTVVS 146
LAGVA PP DGHPLSDTTS T EPP MA *KASTVVS
Sbjct: 321 LAGVAAVPPADGHPLSDTTSFTLEPPCLAMAV*KASTVVS 202
>gb|DW474925.1|DW474925 1-n92 Subtracted libraries from epidermis of 7 day old barley
plants inoculated with R. secalis or the avirulence
protein NIP1 Hordeum vulgare subsp. vulgare cDNA clone
1-n92 similar to Identical to licheninase (EC 3.2.1.73)
in barley (S13734), mRNA sequence
Length = 343
Score = 230 bits (497), Expect = 8e-060
Identities = 90/104 (86%), Positives = 95/104 (91%)
Frame = +3 / -3
Query: 135 QNLFDTTVDAFYVAMGKNGGSGVPLVVSESGWPSGGGVQATPANARVYNQYLINHVGRGT 314
QNLFDTTVDAFY A K+GGS V LVVSESGWPS GG ATPANAR+YNQYLINHVGRGT
Sbjct: 341 QNLFDTTVDAFYTATAKHGGSNVKLVVSESGWPSAGGTAATPANARIYNQYLINHVGRGT 162
Query: 315 PRHPGAIETYLFSMFNENQKESGVEQNWGLFYPNMQHVYPISF* 446
PRHPG IETY+FSMFNENQK++GVEQNWGLFYPNMQHVYPISF*
Sbjct: 161 PRHPGVIETYVFSMFNENQKDNGVEQNWGLFYPNMQHVYPISF* 30
Score = 215 bits (463), Expect = 4e-055
Identities = 89/104 (85%), Positives = 90/104 (86%)
Frame = -2 / +1
Query: 445 QKLMG*TCCMLG*KSPQFCSTPLSFWFSLNMEKR*VSMAPGWRGVPRPTWLMRYWLYTLA 266
QKLMG*TCCMLG*KSPQFCSTPLSFWFSLNMEK *VSM PGWRGVPRPTWLMRYWL LA
Sbjct: 31 QKLMG*TCCMLG*KSPQFCSTPLSFWFSLNMEKT*VSMTPGWRGVPRPTWLMRYWL*ILA 210
Query: 265 LAGVAWTPPPDGHPLSDTTSGTPEPPFFPMAT*KASTVVSKRFW 134
LAGVA PP DGHPLSDTTS T EPP +A *KASTVVS RFW
Sbjct: 211 LAGVAAVPPADGHPLSDTTSFTLEPPCLAVAV*KASTVVSNRFW 342
>gb|AV928494.1|AV928494 AV928494 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basdk07 3', mRNA sequence
Length = 664
Score = 228 bits (492), Expect = 4e-059
Identities = 89/101 (88%), Positives = 94/101 (93%)
Frame = +3 / -3
Query: 144 FDTTVDAFYVAMGKNGGSGVPLVVSESGWPSGGGVQATPANARVYNQYLINHVGRGTPRH 323
FDTTVDAFY AM K+GGS V LVVSESGWPS GG ATPANAR+YNQYLINHVGRGTPRH
Sbjct: 662 FDTTVDAFYTAMAKHGGSNVKLVVSESGWPSAGGTAATPANARIYNQYLINHVGRGTPRH 483
Query: 324 PGAIETYLFSMFNENQKESGVEQNWGLFYPNMQHVYPISF* 446
PGAIETY+FSMFNENQK++GVEQNWGLFYPNMQHVYPISF*
Sbjct: 482 PGAIETYVFSMFNENQKDNGVEQNWGLFYPNMQHVYPISF* 360
Score = 208 bits (449), Expect = 3e-053
Identities = 88/100 (88%), Positives = 88/100 (88%)
Frame = -2 / +1
Query: 445 QKLMG*TCCMLG*KSPQFCSTPLSFWFSLNMEKR*VSMAPGWRGVPRPTWLMRYWLYTLA 266
QKLMG*TCCMLG*KSPQFCSTPLSFWFSLNMEK *VSMAPGWRGVPRPTWLMRYWL LA
Sbjct: 361 QKLMG*TCCMLG*KSPQFCSTPLSFWFSLNMEKT*VSMAPGWRGVPRPTWLMRYWL*ILA 540
Query: 265 LAGVAWTPPPDGHPLSDTTSGTPEPPFFPMAT*KASTVVS 146
LAGVA PP DGHPLSDTTS T EPP MA *KASTVVS
Sbjct: 541 LAGVAAVPPADGHPLSDTTSFTLEPPCLAMAV*KASTVVS 660
>gb|BF265541.2|BF265541 HV_CEa0012I19f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0012I19f, mRNA sequence
Length = 751
Score = 222 bits (479), Expect = 2e-057
Identities = 90/104 (86%), Positives = 94/104 (90%)
Frame = +3 / +3
Query: 3 RTGSPLMANIYPYLAWAYNPSAMDMSYALFTSSGTVVQDGAYGYQNLFDTTVDAFYVAMG 182
RTG+PLMANIYPYLAWAYNPSAMDMSYALFT+SGTVVQDG+YGYQNLFDTTVDAFY AM
Sbjct: 438 RTGAPLMANIYPYLAWAYNPSAMDMSYALFTASGTVVQDGSYGYQNLFDTTVDAFYTAMA 617
Query: 183 KNGGSGVPLVVSESGWPSGGGVQATPANARVYNQYLINHVGRGT 314
K+GGS V LVVSESGWPS GG ATPANAR YN LINHVGRGT
Sbjct: 618 KHGGSNVKLVVSESGWPSAGGTVATPANARNYNPVLINHVGRGT 749
Score = 182 bits (391), Expect = 3e-045
Identities = 84/105 (80%), Positives = 86/105 (81%)
Frame = -2 / -1
Query: 316 GVPRPTWLMRYWLYTLALAGVAWTPPPDGHPLSDTTSGTPEPPFFPMAT*KASTVVSKRF 137
GVPRPTWL+R L LALAGVA PP DGHPLSDTTS T EPP MA *KASTVVS RF
Sbjct: 751 GVPRPTWLIRTGL*FLALAGVATVPPADGHPLSDTTSFTLEPPCLAMAV*KASTVVSNRF 572
Query: 136 WYP*APSCTTVPEEVKSA*LMSMALGLYAQARYG*MLAMSGDPVR 2
WYP* PS TTVP+ VKSA*LMSMALGL AQARYG*MLAMSG PVR
Sbjct: 571 WYP*EPSWTTVPDAVKSA*LMSMALGL*AQARYG*MLAMSGAPVR 437
Score = 73.9 bits (155), Expect(2) = 2e-021
Identities = 31/35 (88%), Positives = 31/35 (88%)
Frame = -1 / -3
Query: 107 GAGGGEERVAHVHGAGVVCPGQVRVDVGHERRPGA 3
GAG GEERVAHVHGA VV PGQVRVDVGHERR GA
Sbjct: 542 GAGRGEERVAHVHGARVVGPGQVRVDVGHERRAGA 438
Score = 48.3 bits (99), Expect(2) = 2e-021
Identities = 21/35 (60%), Positives = 22/35 (62%)
Frame = -1 / -3
Query: 281 VVHPRVGRRGLDAAAGRPPALGHHERHAGAAVLSH 177
VV P VGR A RPPA GHH+ H GAAVL H
Sbjct: 716 VVIPGVGRGRHRATG*RPPAFGHHQLHVGAAVLGH 612
>gb|BJ545434.1|BJ545434 BJ545434 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak35e23 3', mRNA sequence
Length = 494
Score = 211 bits (456), Expect = 4e-054
Identities = 82/94 (87%), Positives = 87/94 (92%)
Frame = +3 / -3
Query: 165 FYVAMGKNGGSGVPLVVSESGWPSGGGVQATPANARVYNQYLINHVGRGTPRHPGAIETY 344
FY AM K+GGS V LVVSESGWPS GG ATPANAR+YNQYLINHVGRGTPRHPGAIETY
Sbjct: 492 FYTAMAKHGGSNVKLVVSESGWPSAGGTAATPANARIYNQYLINHVGRGTPRHPGAIETY 313
Query: 345 LFSMFNENQKESGVEQNWGLFYPNMQHVYPISF* 446
+FSMFNENQK++GVEQNWGLFYPNMQHVYPISF*
Sbjct: 312 VFSMFNENQKDNGVEQNWGLFYPNMQHVYPISF* 211
Score = 197 bits (424), Expect = 9e-050
Identities = 82/94 (87%), Positives = 82/94 (87%)
Frame = -2 / +2
Query: 445 QKLMG*TCCMLG*KSPQFCSTPLSFWFSLNMEKR*VSMAPGWRGVPRPTWLMRYWLYTLA 266
QKLMG*TCCMLG*KSPQFCSTPLSFWFSLNMEK *VSMAPGWRGVPRPTWLMRYWL LA
Sbjct: 212 QKLMG*TCCMLG*KSPQFCSTPLSFWFSLNMEKT*VSMAPGWRGVPRPTWLMRYWL*ILA 391
Query: 265 LAGVAWTPPPDGHPLSDTTSGTPEPPFFPMAT*K 164
LAGVA PP DGHPLSDTTS T EPP MA *K
Sbjct: 392 LAGVAAVPPADGHPLSDTTSFTLEPPCLAMAV*K 493
>gb|BI953200.1|BI953200 HVSMEm0011J22f Hordeum vulgare green seedling EST library
HVcDNA0014 (Blumeria infected) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEm0011J22f, mRNA sequence
Length = 472
Score = 209 bits (451), Expect = 2e-053
Identities = 83/99 (83%), Positives = 88/99 (88%)
Frame = +3 / +1
Query: 3 RTGSPLMANIYPYLAWAYNPSAMDMSYALFTSSGTVVQDGAYGYQNLFDTTVDAFYVAMG 182
RTG+PLMANIYPYLAWAYNPSAMDMSYALFT+ GTVVQDG+YGYQNLFDTTVDAFY AM
Sbjct: 175 RTGAPLMANIYPYLAWAYNPSAMDMSYALFTAXGTVVQDGSYGYQNLFDTTVDAFYTAMA 354
Query: 183 KNGGSGVPLVVSESGWPSGGGVQATPANARVYNQYLINH 299
K+GGS V LVV ESGWPS G A PANAR+YNQYLINH
Sbjct: 355 KHGGSNVKLVVFESGWPSARGTAANPANARIYNQYLINH 471
Score = 168 bits (361), Expect = 5e-041
Identities = 78/99 (78%), Positives = 79/99 (79%)
Frame = -2 / -3
Query: 298 WLMRYWLYTLALAGVAWTPPPDGHPLSDTTSGTPEPPFFPMAT*KASTVVSKRFWYP*AP 119
WLMRYWL LALAG A P DGHPLS+TTS T EPP MA *KASTVVS RFWYP* P
Sbjct: 470 WLMRYWL*ILALAGFAAVPRADGHPLSNTTSFTLEPPCLAMAV*KASTVVSNRFWYP*EP 291
Query: 118 SCTTVPEEVKSA*LMSMALGLYAQARYG*MLAMSGDPVR 2
S TTVP VKSA*LMSMALGL AQARYG*MLAMSG PVR
Sbjct: 290 SWTTVPXAVKSA*LMSMALGL*AQARYG*MLAMSGAPVR 174
Score = 70.7 bits (148), Expect(2) = 2e-021
Identities = 30/35 (85%), Positives = 30/35 (85%)
Frame = -1 / -2
Query: 107 GAGGGEERVAHVHGAGVVCPGQVRVDVGHERRPGA 3
GA GEERVAHVHGA VV PGQVRVDVGHERR GA
Sbjct: 279 GAXRGEERVAHVHGARVVGPGQVRVDVGHERRAGA 175
Score = 51.9 bits (107), Expect(2) = 2e-021
Identities = 23/38 (60%), Positives = 25/38 (65%)
Frame = -1 / -2
Query: 290 EVLVVHPRVGRRGLDAAAGRPPALGHHERHAGAAVLSH 177
EVLVV P VGR +A RPPA HH+ H GAAVL H
Sbjct: 462 EVLVVDPGVGRVRRRSAG*RPPAFEHHQLHVGAAVLGH 349
>gb|CB884196.1|CB884196 HV09B24u HV Hordeum vulgare subsp. vulgare cDNA clone HV09B24
3-PRIME, mRNA sequence
Length = 534
Score = 209 bits (451), Expect = 2e-053
Identities = 81/94 (86%), Positives = 89/94 (94%)
Frame = +3 / -2
Query: 174 AMGKNGGSGVPLVVSESGWPSGGGVQATPANARVYNQYLINHVGRGTPRHPGAIETYLFS 353
AMGK+GGS V LVVSESGWPSGGG ATPANAR YNQ+LINHVGRGTPRHPGAIETY+F+
Sbjct: 530 AMGKHGGSSVKLVVSESGWPSGGGTAATPANARFYNQHLINHVGRGTPRHPGAIETYIFA 351
Query: 354 MFNENQKESGVEQNWGLFYPNMQHVYPISF*RTT 455
MFNENQK+SGVEQNWGLFYPNMQHVYPI+F*R++
Sbjct: 350 MFNENQKDSGVEQNWGLFYPNMQHVYPINF*RSS 249
Score = 195 bits (420), Expect = 3e-049
Identities = 80/91 (87%), Positives = 80/91 (87%)
Frame = -2 / +1
Query: 445 QKLMG*TCCMLG*KSPQFCSTPLSFWFSLNMEKR*VSMAPGWRGVPRPTWLMRYWLYTLA 266
QKLMG*TCCMLG*KSPQFCSTPLSFWFSLNM K *VSMAPGWRGVPRPTWLMR WL LA
Sbjct: 259 QKLMG*TCCMLG*KSPQFCSTPLSFWFSLNMAKM*VSMAPGWRGVPRPTWLMRCWL*NLA 438
Query: 265 LAGVAWTPPPDGHPLSDTTSGTPEPPFFPMA 173
LAGVA PPPDGHPLSDTTS T EPP PMA
Sbjct: 439 LAGVAAVPPPDGHPLSDTTSFTLEPPCLPMA 531
>gb|CB884210.1|CB884210 HV12O06u HV Hordeum vulgare subsp. vulgare cDNA clone HV12O06
3-PRIME, mRNA sequence
Length = 526
Score = 209 bits (451), Expect = 2e-053
Identities = 81/94 (86%), Positives = 89/94 (94%)
Frame = +3 / -2
Query: 174 AMGKNGGSGVPLVVSESGWPSGGGVQATPANARVYNQYLINHVGRGTPRHPGAIETYLFS 353
AMGK+GGS V LVVSESGWPSGGG ATPANAR YNQ+LINHVGRGTPRHPGAIETY+F+
Sbjct: 522 AMGKHGGSSVKLVVSESGWPSGGGTAATPANARFYNQHLINHVGRGTPRHPGAIETYIFA 343
Query: 354 MFNENQKESGVEQNWGLFYPNMQHVYPISF*RTT 455
MFNENQK+SGVEQNWGLFYPNMQHVYPI+F*R++
Sbjct: 342 MFNENQKDSGVEQNWGLFYPNMQHVYPINF*RSS 241
Score = 195 bits (420), Expect = 3e-049
Identities = 80/91 (87%), Positives = 80/91 (87%)
Frame = -2 / +2
Query: 445 QKLMG*TCCMLG*KSPQFCSTPLSFWFSLNMEKR*VSMAPGWRGVPRPTWLMRYWLYTLA 266
QKLMG*TCCMLG*KSPQFCSTPLSFWFSLNM K *VSMAPGWRGVPRPTWLMR WL LA
Sbjct: 251 QKLMG*TCCMLG*KSPQFCSTPLSFWFSLNMAKM*VSMAPGWRGVPRPTWLMRCWL*NLA 430
Query: 265 LAGVAWTPPPDGHPLSDTTSGTPEPPFFPMA 173
LAGVA PPPDGHPLSDTTS T EPP PMA
Sbjct: 431 LAGVAAVPPPDGHPLSDTTSFTLEPPCLPMA 523
>gb|AV927361.1|AV927361 AV927361 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd1l14 3', mRNA sequence
Length = 619
Score = 209 bits (450), Expect = 2e-053
Identities = 81/93 (87%), Positives = 86/93 (92%)
Frame = +3 / -2
Query: 168 YVAMGKNGGSGVPLVVSESGWPSGGGVQATPANARVYNQYLINHVGRGTPRHPGAIETYL 347
Y AM K+GGS V LVVSESGWPS GG ATPANAR+YNQYLINHVGRGTPRHPGAIETY+
Sbjct: 618 YTAMAKHGGSNVKLVVSESGWPSAGGTAATPANARIYNQYLINHVGRGTPRHPGAIETYV 439
Query: 348 FSMFNENQKESGVEQNWGLFYPNMQHVYPISF* 446
FSMFNENQK++GVEQNWGLFYPNMQHVYPISF*
Sbjct: 438 FSMFNENQKDNGVEQNWGLFYPNMQHVYPISF* 340
Score = 194 bits (419), Expect = 5e-049
Identities = 81/93 (87%), Positives = 81/93 (87%)
Frame = -2 / +2
Query: 445 QKLMG*TCCMLG*KSPQFCSTPLSFWFSLNMEKR*VSMAPGWRGVPRPTWLMRYWLYTLA 266
QKLMG*TCCMLG*KSPQFCSTPLSFWFSLNMEK *VSMAPGWRGVPRPTWLMRYWL LA
Sbjct: 341 QKLMG*TCCMLG*KSPQFCSTPLSFWFSLNMEKT*VSMAPGWRGVPRPTWLMRYWL*ILA 520
Query: 265 LAGVAWTPPPDGHPLSDTTSGTPEPPFFPMAT* 167
LAGVA PP DGHPLSDTTS T EPP MA *
Sbjct: 521 LAGVAAVPPADGHPLSDTTSFTLEPPCLAMAV* 619
>gb|BF257633.2|BF257633 HVSMEf0013G15f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0013G15f, mRNA sequence
Length = 523
Score = 207 bits (447), Expect = 6e-053
Identities = 84/102 (82%), Positives = 90/102 (88%)
Frame = +3 / +3
Query: 3 RTGSPLMANIYPYLAWAYNPSAMDMSYALFTSSGTVVQDGAYGYQNLFDTTVDAFYVAMG 182
RTG+PLMANIYPYLAWAYNPSAMDMSYALFT+ GTVVQDG+YGYQNLFDTTVDAFY AM
Sbjct: 216 RTGAPLMANIYPYLAWAYNPSAMDMSYALFTAFGTVVQDGSYGYQNLFDTTVDAFYTAMA 395
Query: 183 KNGGSGVPLVVSESGWPSGGGVQATPANARVYNQYLINHVGR 308
K+G S V LVV +SGWPS G ATP NAR+YNQYLINHVGR
Sbjct: 396 KHGCSNVKLVVYDSGWPSLGCTVATPVNARIYNQYLINHVGR 521
Score = 175 bits (377), Expect = 3e-043
Identities = 81/103 (78%), Positives = 81/103 (78%)
Frame = -2 / -1
Query: 310 PRPTWLMRYWLYTLALAGVAWTPPPDGHPLSDTTSGTPEPPFFPMAT*KASTVVSKRFWY 131
PRPTWLMRYWL LAL GVA P DGHPLS TTS T E P MA *KASTVVS RFWY
Sbjct: 523 PRPTWLMRYWL*ILALTGVATVQPSDGHPLSYTTSFTLEQPCLAMAV*KASTVVSNRFWY 344
Query: 130 P*APSCTTVPEEVKSA*LMSMALGLYAQARYG*MLAMSGDPVR 2
P* PS TTVP VKSA*LMSMALGL AQARYG*MLAMSG PVR
Sbjct: 343 P*EPSWTTVPNAVKSA*LMSMALGL*AQARYG*MLAMSGAPVR 215
Score = 70.3 bits (147), Expect(2) = 8e-021
Identities = 30/35 (85%), Positives = 30/35 (85%)
Frame = -1 / -3
Query: 107 GAGGGEERVAHVHGAGVVCPGQVRVDVGHERRPGA 3
GA GEERVAHVHGA VV PGQVRVDVGHERR GA
Sbjct: 320 GAERGEERVAHVHGARVVGPGQVRVDVGHERRAGA 216
Score = 50.1 bits (103), Expect(2) = 8e-021
Identities = 23/38 (60%), Positives = 25/38 (65%)
Frame = -1 / -3
Query: 290 EVLVVHPRVGRRGLDAAAGRPPALGHHERHAGAAVLSH 177
EVLVV P V R AA RPPA+ HH+ H GAAVL H
Sbjct: 503 EVLVVDPGVDRGRHRAAE*RPPAIVHHQLHVGAAVLGH 390
>gb|BQ664638.1|BQ664638 HV04D23u HV Hordeum vulgare subsp. vulgare cDNA clone HV04D23
3-PRIME, mRNA sequence
Length = 528
Score = 207 bits (447), Expect = 6e-053
Identities = 80/93 (86%), Positives = 88/93 (94%)
Frame = +3 / -2
Query: 177 MGKNGGSGVPLVVSESGWPSGGGVQATPANARVYNQYLINHVGRGTPRHPGAIETYLFSM 356
MGK+GGS V LVVSESGWPSGGG ATPANAR YNQ+LINHVGRGTPRHPGAIETY+F+M
Sbjct: 527 MGKHGGSSVKLVVSESGWPSGGGTAATPANARFYNQHLINHVGRGTPRHPGAIETYIFAM 348
Query: 357 FNENQKESGVEQNWGLFYPNMQHVYPISF*RTT 455
FNENQK+SGVEQNWGLFYPNMQHVYPI+F*R++
Sbjct: 347 FNENQKDSGVEQNWGLFYPNMQHVYPINF*RSS 249
Score = 193 bits (416), Expect = 1e-048
Identities = 79/90 (87%), Positives = 79/90 (87%)
Frame = -2 / +1
Query: 445 QKLMG*TCCMLG*KSPQFCSTPLSFWFSLNMEKR*VSMAPGWRGVPRPTWLMRYWLYTLA 266
QKLMG*TCCMLG*KSPQFCSTPLSFWFSLNM K *VSMAPGWRGVPRPTWLMR WL LA
Sbjct: 259 QKLMG*TCCMLG*KSPQFCSTPLSFWFSLNMAKM*VSMAPGWRGVPRPTWLMRCWL*NLA 438
Query: 265 LAGVAWTPPPDGHPLSDTTSGTPEPPFFPM 176
LAGVA PPPDGHPLSDTTS T EPP PM
Sbjct: 439 LAGVAAVPPPDGHPLSDTTSFTLEPPCLPM 528
>gb|CB879399.1|CB879399 HP02B03w HP Hordeum vulgare subsp. vulgare cDNA clone HP02B03
3-PRIME, mRNA sequence
Length = 644
Score = 201 bits (434), Expect = 4e-051
Identities = 78/88 (88%), Positives = 83/88 (94%)
Frame = +3 / -2
Query: 183 KNGGSGVPLVVSESGWPSGGGVQATPANARVYNQYLINHVGRGTPRHPGAIETYLFSMFN 362
K+GGS V LVVSESGWPS GG ATPANAR+YNQYLINHVGRGTPRHPGAIETY+FSMFN
Sbjct: 643 KHGGSNVKLVVSESGWPSAGGTAATPANARIYNQYLINHVGRGTPRHPGAIETYVFSMFN 464
Query: 363 ENQKESGVEQNWGLFYPNMQHVYPISF* 446
ENQK++GVEQNWGLFYPNMQHVYPISF*
Sbjct: 463 ENQKDNGVEQNWGLFYPNMQHVYPISF* 380
Score = 191 bits (412), Expect = 4e-048
Identities = 78/86 (90%), Positives = 78/86 (90%)
Frame = -2 / +3
Query: 445 QKLMG*TCCMLG*KSPQFCSTPLSFWFSLNMEKR*VSMAPGWRGVPRPTWLMRYWLYTLA 266
QKLMG*TCCMLG*KSPQFCSTPLSFWFSLNMEK *VSMAPGWRGVPRPTWLMRYWL LA
Sbjct: 381 QKLMG*TCCMLG*KSPQFCSTPLSFWFSLNMEKT*VSMAPGWRGVPRPTWLMRYWL*ILA 560
Query: 265 LAGVAWTPPPDGHPLSDTTSGTPEPP 188
LAGVA PP DGHPLSDTTS T EPP
Sbjct: 561 LAGVAAVPPADGHPLSDTTSFTLEPP 638
>gb|BG310053.1|BG310053 HVSMEc0016D10f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0016D10f, mRNA sequence
Length = 817
Score = 183 bits (394), Expect(2) = 8e-051
Identities = 72/88 (81%), Positives = 79/88 (89%)
Frame = +3 / -2
Query: 183 KNGGSGVPLVVSESGWPSGGGVQATPANARVYNQYLINHVGRGTPRHPGAIETYLFSMFN 362
K+ GS V L+VS+SG PS G TPANAR+YNQYLINHVGRGTPRHPGAIETY+FSMFN
Sbjct: 645 KHVGSNVKLMVSKSGCPSADGTTTTPANARIYNQYLINHVGRGTPRHPGAIETYVFSMFN 466
Query: 363 ENQKESGVEQNWGLFYPNMQHVYPISF* 446
ENQK++GVEQNWGLFYPNMQHVYPISF*
Sbjct: 465 ENQKDNGVEQNWGLFYPNMQHVYPISF* 382
Score = 176 bits (379), Expect(2) = 2e-048
Identities = 73/88 (82%), Positives = 73/88 (82%)
Frame = -2 / +2
Query: 445 QKLMG*TCCMLG*KSPQFCSTPLSFWFSLNMEKR*VSMAPGWRGVPRPTWLMRYWLYTLA 266
QKLMG*TCCMLG*KSPQFCSTPLSFWFSLNMEK *VSMAPGWRGVPRPTWLMRYWL LA
Sbjct: 383 QKLMG*TCCMLG*KSPQFCSTPLSFWFSLNMEKT*VSMAPGWRGVPRPTWLMRYWL*ILA 562
Query: 265 LAGVAWTPPPDGHPLSDTTSGTPEPPFF 182
AGV P DGHPL DT S T EP F
Sbjct: 563 FAGVVVVPSADGHPLFDTISFTFEPTCF 646
Score = 37.7 bits (76), Expect(2) = 8e-051
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = +3 / -3
Query: 60 PSAMDMSYALFTSSGTVVQDGAYGYQNLFD 149
PS +S A+ T SGT VQ G+ GYQN+ +
Sbjct: 770 PSRQGIS*AILTESGTCVQSGSNGYQNMLN 681
Score = 36.3 bits (73), Expect(2) = 2e-048
Identities = 16/27 (59%), Positives = 17/27 (62%)
Frame = -2 / +1
Query: 139 FWYP*APSCTTVPEEVKSA*LMSMALG 59
FWYP P T VP+ VK A*LM LG
Sbjct: 691 FWYPFEPLWTHVPDSVKIA*LMPWRLG 771
>gb|BJ547063.1|BJ547063 BJ547063 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal14c14 5', mRNA sequence
Length = 412
Score = 197 bits (424), Expect = 9e-050
Identities = 79/90 (87%), Positives = 83/90 (92%)
Frame = +3 / +3
Query: 3 RTGSPLMANIYPYLAWAYNPSAMDMSYALFTSSGTVVQDGAYGYQNLFDTTVDAFYVAMG 182
RTG+PLMANIYPYLAWAYNPSAMDMSYALFT+SGTVVQDG+YGYQNLFDTTVDAFY AM
Sbjct: 141 RTGAPLMANIYPYLAWAYNPSAMDMSYALFTASGTVVQDGSYGYQNLFDTTVDAFYTAMA 320
Query: 183 KNGGSGVPLVVSESGWPSGGGVQATPANAR 272
K+GGS V LVVSESGWPS GG ATPANAR
Sbjct: 321 KHGGSNVKLVVSESGWPSAGGTAATPANAR 410
Score = 159 bits (341), Expect = 3e-038
Identities = 74/90 (82%), Positives = 75/90 (83%)
Frame = -2 / -1
Query: 271 LALAGVAWTPPPDGHPLSDTTSGTPEPPFFPMAT*KASTVVSKRFWYP*APSCTTVPEEV 92
LALAGVA PP DGHPLSDTTS T EPP MA *KASTVVS RFWYP* PS TTVP+ V
Sbjct: 409 LALAGVAAVPPADGHPLSDTTSFTLEPPCLAMAV*KASTVVSNRFWYP*EPSWTTVPDAV 230
Query: 91 KSA*LMSMALGLYAQARYG*MLAMSGDPVR 2
KSA*LMSMALGL AQARYG*MLAMSG PVR
Sbjct: 229 KSA*LMSMALGL*AQARYG*MLAMSGAPVR 140
Score = 73.9 bits (155), Expect(2) = 7e-022
Identities = 31/35 (88%), Positives = 31/35 (88%)
Frame = -1 / -3
Query: 107 GAGGGEERVAHVHGAGVVCPGQVRVDVGHERRPGA 3
GAG GEERVAHVHGA VV PGQVRVDVGHERR GA
Sbjct: 245 GAGRGEERVAHVHGARVVGPGQVRVDVGHERRAGA 141
Score = 50.1 bits (103), Expect(2) = 7e-022
Identities = 21/32 (65%), Positives = 22/32 (68%)
Frame = -1 / -3
Query: 272 PRVGRRGLDAAAGRPPALGHHERHAGAAVLSH 177
P VGR AA RPPALGHH+ H GAAVL H
Sbjct: 410 PGVGRGRRRAAG*RPPALGHHQLHVGAAVLGH 315
>gb|AV929134.1|AV929134 AV929134 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd11b22 3', mRNA sequence
Length = 644
Score = 196 bits (422), Expect = 2e-049
Identities = 76/85 (89%), Positives = 80/85 (94%)
Frame = +3 / -1
Query: 192 GSGVPLVVSESGWPSGGGVQATPANARVYNQYLINHVGRGTPRHPGAIETYLFSMFNENQ 371
GS V LVVSESGWPS GG ATPANAR+YNQYLINHVGRGTPRHPGAIETY+FSMFNENQ
Sbjct: 617 GSNVKLVVSESGWPSAGGTAATPANARIYNQYLINHVGRGTPRHPGAIETYVFSMFNENQ 438
Query: 372 KESGVEQNWGLFYPNMQHVYPISF* 446
K++GVEQNWGLFYPNMQHVYPISF*
Sbjct: 437 KDNGVEQNWGLFYPNMQHVYPISF* 363
Score = 188 bits (405), Expect = 4e-047
Identities = 77/85 (90%), Positives = 77/85 (90%)
Frame = -2 / +1
Query: 445 QKLMG*TCCMLG*KSPQFCSTPLSFWFSLNMEKR*VSMAPGWRGVPRPTWLMRYWLYTLA 266
QKLMG*TCCMLG*KSPQFCSTPLSFWFSLNMEK *VSMAPGWRGVPRPTWLMRYWL LA
Sbjct: 364 QKLMG*TCCMLG*KSPQFCSTPLSFWFSLNMEKT*VSMAPGWRGVPRPTWLMRYWL*ILA 543
Query: 265 LAGVAWTPPPDGHPLSDTTSGTPEP 191
LAGVA PP DGHPLSDTTS T EP
Sbjct: 544 LAGVAAVPPADGHPLSDTTSFTLEP 618
>gb|AV930490.1|AV930490 AV930490 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd22m09 3', mRNA sequence
Length = 642
Score = 196 bits (422), Expect = 2e-049
Identities = 76/85 (89%), Positives = 80/85 (94%)
Frame = +3 / -1
Query: 192 GSGVPLVVSESGWPSGGGVQATPANARVYNQYLINHVGRGTPRHPGAIETYLFSMFNENQ 371
GS V LVVSESGWPS GG ATPANAR+YNQYLINHVGRGTPRHPGAIETY+FSMFNENQ
Sbjct: 615 GSNVKLVVSESGWPSAGGTAATPANARIYNQYLINHVGRGTPRHPGAIETYVFSMFNENQ 436
Query: 372 KESGVEQNWGLFYPNMQHVYPISF* 446
K++GVEQNWGLFYPNMQHVYPISF*
Sbjct: 435 KDNGVEQNWGLFYPNMQHVYPISF* 361
Score = 188 bits (405), Expect = 4e-047
Identities = 77/85 (90%), Positives = 77/85 (90%)
Frame = -2 / +2
Query: 445 QKLMG*TCCMLG*KSPQFCSTPLSFWFSLNMEKR*VSMAPGWRGVPRPTWLMRYWLYTLA 266
QKLMG*TCCMLG*KSPQFCSTPLSFWFSLNMEK *VSMAPGWRGVPRPTWLMRYWL LA
Sbjct: 362 QKLMG*TCCMLG*KSPQFCSTPLSFWFSLNMEKT*VSMAPGWRGVPRPTWLMRYWL*ILA 541
Query: 265 LAGVAWTPPPDGHPLSDTTSGTPEP 191
LAGVA PP DGHPLSDTTS T EP
Sbjct: 542 LAGVAAVPPADGHPLSDTTSFTLEP 616
>gb|CD663219.1|CD663219 UCRHV18_04da12_b1 Drought-stressed Dicktoo barley epidermis cDNA
library Hordeum vulgare subsp. vulgare cDNA clone
UCRHV18_04da12, mRNA sequence
Length = 541
Score = 196 bits (422), Expect = 2e-049
Identities = 75/86 (87%), Positives = 81/86 (94%)
Frame = +3 / -2
Query: 189 GGSGVPLVVSESGWPSGGGVQATPANARVYNQYLINHVGRGTPRHPGAIETYLFSMFNEN 368
GGS V LVVSESGWPS GG ATPANAR+YNQYLINHVGRGTPRHPGA+ETY+FSMFNEN
Sbjct: 540 GGSNVKLVVSESGWPSAGGTAATPANARIYNQYLINHVGRGTPRHPGAMETYVFSMFNEN 361
Query: 369 QKESGVEQNWGLFYPNMQHVYPISF* 446
QK++GVEQNWGLFYPNMQHVYPI+F*
Sbjct: 360 QKDNGVEQNWGLFYPNMQHVYPITF* 283
Score = 190 bits (409), Expect = 1e-047
Identities = 77/86 (89%), Positives = 78/86 (90%)
Frame = -2 / +2
Query: 445 QKLMG*TCCMLG*KSPQFCSTPLSFWFSLNMEKR*VSMAPGWRGVPRPTWLMRYWLYTLA 266
QK+MG*TCCMLG*KSPQFCSTPLSFWFSLNMEK *VSMAPGWRGVPRPTWLMRYWL LA
Sbjct: 284 QKVMG*TCCMLG*KSPQFCSTPLSFWFSLNMEKT*VSMAPGWRGVPRPTWLMRYWL*ILA 463
Query: 265 LAGVAWTPPPDGHPLSDTTSGTPEPP 188
LAGVA PP DGHPLSDTTS T EPP
Sbjct: 464 LAGVAAVPPADGHPLSDTTSFTLEPP 541
>gb|AV928013.1|AV928013 AV928013 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd13j20 3', mRNA sequence
Length = 647
Score = 153 bits (329), Expect(2) = 6e-049
Identities = 58/62 (93%), Positives = 62/62 (100%)
Frame = +3 / -1
Query: 261 ANARVYNQYLINHVGRGTPRHPGAIETYLFSMFNENQKESGVEQNWGLFYPNMQHVYPIS 440
ANAR+YNQYLINHVGRGTPRHPGAIETY+FSMFNENQK++GVEQNWGLFYPNMQHVYPIS
Sbjct: 548 ANARIYNQYLINHVGRGTPRHPGAIETYVFSMFNENQKDNGVEQNWGLFYPNMQHVYPIS 369
Query: 441 F* 446
F*
Sbjct: 368 F* 363
Score = 147 bits (315), Expect(2) = 7e-044
Identities = 59/62 (95%), Positives = 59/62 (95%)
Frame = -2 / +1
Query: 445 QKLMG*TCCMLG*KSPQFCSTPLSFWFSLNMEKR*VSMAPGWRGVPRPTWLMRYWLYTLA 266
QKLMG*TCCMLG*KSPQFCSTPLSFWFSLNMEK *VSMAPGWRGVPRPTWLMRYWL LA
Sbjct: 364 QKLMG*TCCMLG*KSPQFCSTPLSFWFSLNMEKT*VSMAPGWRGVPRPTWLMRYWL*ILA 543
Query: 265 LA 260
LA
Sbjct: 544 LA 549
Score = 61.1 bits (127), Expect(2) = 6e-049
Identities = 24/32 (75%), Positives = 25/32 (78%)
Frame = +3 / -3
Query: 165 FYVAMGKNGGSGVPLVVSESGWPSGGGVQATP 260
FY AM K+GGS V LVVSESGWPS GG ATP
Sbjct: 645 FYTAMAKHGGSNVKLVVSESGWPSAGGTAATP 550
Score = 50.6 bits (104), Expect(2) = 7e-044
Identities = 22/31 (70%), Positives = 22/31 (70%)
Frame = -2 / +2
Query: 259 GVAWTPPPDGHPLSDTTSGTPEPPFFPMAT* 167
GVA PP DGHPLSDTTS T EPP MA *
Sbjct: 551 GVAAVPPADGHPLSDTTSFTLEPPCLAMAV* 643
>gb|BQ468175.1|BQ468175 HP01E06T HP Hordeum vulgare subsp. vulgare cDNA clone HP01E06
5-PRIME, mRNA sequence
Length = 547
Score = 194 bits (418), Expect = 6e-049
Identities = 76/90 (84%), Positives = 82/90 (91%)
Frame = +3 / +2
Query: 177 MGKNGGSGVPLVVSESGWPSGGGVQATPANARVYNQYLINHVGRGTPRHPGAIETYLFSM 356
+ K+GGS V LVVSESGWPS GG ATPANAR+YNQYLINHV GTPRHPGAIETY+FSM
Sbjct: 20 VAKHGGSNVKLVVSESGWPSAGGTAATPANARIYNQYLINHVVFGTPRHPGAIETYVFSM 199
Query: 357 FNENQKESGVEQNWGLFYPNMQHVYPISF* 446
FNENQK++GVEQNWGLFYPNMQHVYPISF*
Sbjct: 200 FNENQKDNGVEQNWGLFYPNMQHVYPISF* 289
Score = 186 bits (401), Expect = 1e-046
Identities = 76/86 (88%), Positives = 77/86 (89%)
Frame = -2 / -2
Query: 445 QKLMG*TCCMLG*KSPQFCSTPLSFWFSLNMEKR*VSMAPGWRGVPRPTWLMRYWLYTLA 266
QKLMG*TCCMLG*KSPQFCSTPLSFWFSLNMEK *VSMAPGWRGVP+ TWLMRYWL LA
Sbjct: 288 QKLMG*TCCMLG*KSPQFCSTPLSFWFSLNMEKT*VSMAPGWRGVPKTTWLMRYWL*ILA 109
Query: 265 LAGVAWTPPPDGHPLSDTTSGTPEPP 188
LAGVA PP DGHPLSDTTS T EPP
Sbjct: 108 LAGVAAVPPADGHPLSDTTSFTLEPP 31
>gb|BJ456617.1|BJ456617 BJ456617 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak22k17 3', mRNA sequence
Length = 710
Score = 143 bits (307), Expect(3) = 2e-048
Identities = 58/102 (56%), Positives = 72/102 (70%)
Frame = +3 / -2
Query: 6 TGSPLMANIYPYLAWAYNPSAMDMSYALFTSSGTVVQDGAYGYQNLFDTTVDAFYVAMGK 185
TG+PL+AN+YPY ++ + + +D++YALF S GTVVQDGA YQNLFD VD FY A+
Sbjct: 661 TGAPLLANVYPYFSYVRDQAQIDINYALFKSQGTVVQDGANAYQNLFDAIVDTFYSALES 482
Query: 186 NGGSGVPLVVSESGWPSGGGVQATPANARVYNQYLINHVGRG 311
G V +VVSESGWPS GG AT NA+ YNQ LI H+ G
Sbjct: 481 AGAGSVGVVVSESGWPSEGGTAATTDNAQTYNQNLIKHIHVG 356
Score = 111 bits (236), Expect(2) = 5e-031
Identities = 52/97 (53%), Positives = 61/97 (62%)
Frame = -2 / +3
Query: 295 LMRYWLYTLALAGVAWTPPPDGHPLSDTTSGTPEPPFFPMAT*KASTVVSKRFWYP*APS 116
L+R+WLY AL+ VA PP DGHPLSDTT+ T P A * ST+ S RFWY APS
Sbjct: 372 LIRFWLYVCALSVVAAVPPSDGHPLSDTTTPTLPAPALSSAE*NVSTMASNRFWYALAPS 551
Query: 115 CTTVPEEVKSA*LMSMALGLYAQARYG*MLAMSGDPV 5
CTTVP ++KSA*LMS+ + G LA G PV
Sbjct: 552 CTTVPCDLKSA*LMSICAWSRTYEK*GYTLASRGAPV 662
Score = 55.1 bits (114), Expect(3) = 2e-048
Identities = 19/26 (73%), Positives = 24/26 (92%)
Frame = +3 / -2
Query: 297 HVGRGTPRHPGAIETYLFSMFNENQK 374
HVG+GTP+ PGAIE Y+F+MFNEN+K
Sbjct: 364 HVGQGTPKRPGAIEAYVFAMFNENRK 287
Score = 43.7 bits (89), Expect(2) = 5e-031
Identities = 18/27 (66%), Positives = 19/27 (70%)
Frame = -2 / +3
Query: 373 FWFSLNMEKR*VSMAPGWRGVPRPTWL 293
F FSLNM * SMAPG GVP PTW+
Sbjct: 288 FLFSLNMANT*ASMAPGLLGVPCPTWI 368
Score = 33.1 bits (66), Expect(3) = 2e-048
Identities = 12/23 (52%), Positives = 18/23 (78%)
Frame = +3 / -2
Query: 384 VEQNWGLFYPNMQHVYPISF*RT 452
+E+++GLF P+ YPISF*+T
Sbjct: 274 IEKHFGLFNPDKSPAYPISF*KT 206
>gb|BJ548188.1|BJ548188 BJ548188 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal14c14 3', mRNA sequence
Length = 607
Score = 190 bits (409), Expect = 1e-047
Identities = 73/80 (91%), Positives = 77/80 (96%)
Frame = +3 / -2
Query: 207 LVVSESGWPSGGGVQATPANARVYNQYLINHVGRGTPRHPGAIETYLFSMFNENQKESGV 386
LVVSESGWPS GG ATPANAR+YNQYLINHVGRGTPRHPGAIETY+FSMFNENQK++GV
Sbjct: 579 LVVSESGWPSAGGTAATPANARIYNQYLINHVGRGTPRHPGAIETYVFSMFNENQKDNGV 400
Query: 387 EQNWGLFYPNMQHVYPISF* 446
EQNWGLFYPNMQHVYPISF*
Sbjct: 399 EQNWGLFYPNMQHVYPISF* 340
Score = 183 bits (394), Expect = 1e-045
Identities = 74/80 (92%), Positives = 74/80 (92%)
Frame = -2 / +2
Query: 445 QKLMG*TCCMLG*KSPQFCSTPLSFWFSLNMEKR*VSMAPGWRGVPRPTWLMRYWLYTLA 266
QKLMG*TCCMLG*KSPQFCSTPLSFWFSLNMEK *VSMAPGWRGVPRPTWLMRYWL LA
Sbjct: 341 QKLMG*TCCMLG*KSPQFCSTPLSFWFSLNMEKT*VSMAPGWRGVPRPTWLMRYWL*ILA 520
Query: 265 LAGVAWTPPPDGHPLSDTTS 206
LAGVA PP DGHPLSDTTS
Sbjct: 521 LAGVAAVPPADGHPLSDTTS 580
>gb|BQ661884.1|BQ661884 HP01K19w HP Hordeum vulgare subsp. vulgare cDNA clone HP01K19
3-PRIME, mRNA sequence
Length = 617
Score = 188 bits (405), Expect = 4e-047
Identities = 72/79 (91%), Positives = 76/79 (96%)
Frame = +3 / -2
Query: 210 VVSESGWPSGGGVQATPANARVYNQYLINHVGRGTPRHPGAIETYLFSMFNENQKESGVE 389
VVSESGWPS GG ATPANAR+YNQYLINHVGRGTPRHPGAIETY+FSMFNENQK++GVE
Sbjct: 616 VVSESGWPSAGGTAATPANARIYNQYLINHVGRGTPRHPGAIETYVFSMFNENQKDNGVE 437
Query: 390 QNWGLFYPNMQHVYPISF* 446
QNWGLFYPNMQHVYPISF*
Sbjct: 436 QNWGLFYPNMQHVYPISF* 380
Score = 181 bits (390), Expect = 5e-045
Identities = 73/79 (92%), Positives = 73/79 (92%)
Frame = -2 / +3
Query: 445 QKLMG*TCCMLG*KSPQFCSTPLSFWFSLNMEKR*VSMAPGWRGVPRPTWLMRYWLYTLA 266
QKLMG*TCCMLG*KSPQFCSTPLSFWFSLNMEK *VSMAPGWRGVPRPTWLMRYWL LA
Sbjct: 381 QKLMG*TCCMLG*KSPQFCSTPLSFWFSLNMEKT*VSMAPGWRGVPRPTWLMRYWL*ILA 560
Query: 265 LAGVAWTPPPDGHPLSDTT 209
LAGVA PP DGHPLSDTT
Sbjct: 561 LAGVAAVPPADGHPLSDTT 617
>gb|AV931182.1|AV931182 AV931182 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd18n18 3', mRNA sequence
Length = 690
Score = 173 bits (372), Expect(2) = 6e-046
Identities = 69/124 (55%), Positives = 85/124 (68%)
Frame = +3 / -3
Query: 6 TGSPLMANIYPYLAWAYNPSAMDMSYALFTSSGTVVQDGAYGYQNLFDTTVDAFYVAMGK 185
TG+PL+AN+YPY A+ NP + +S+A F T V D Y NLFD VD+ Y A+ K
Sbjct: 607 TGAPLLANVYPYFAYKGNPRDIQLSFATFVPGSTTVNDNGLTYTNLFDAMVDSIYAALEK 428
Query: 186 NGGSGVPLVVSESGWPSGGGVQATPANARVYNQYLINHVGRGTPRHPGAIETYLFSMFNE 365
G GV +V+SESGWPS G AT NAR YNQ LINHVG GTP+ GA+ETY+F+MFNE
Sbjct: 427 AGTPGVKVVISESGWPSDQGFGATAQNARAYNQGLINHVGNGTPKKSGALETYIFAMFNE 248
Query: 366 NQKE 377
N K+
Sbjct: 247 NLKD 236
Score = 111 bits (237), Expect = 6e-024
Identities = 64/130 (49%), Positives = 71/130 (54%)
Frame = -2 / +3
Query: 394 FCSTPLSFWFSLNMEKR*VSMAPGWRGVPRPTWLMRYWLYTLALAGVAWTPPPDGHPLSD 215
F S+ S FSLNM K VS AP + GVP PTWL+ WLY A VA P DGHPLSD
Sbjct: 219 FSSSSPSLRFSLNMAKIYVSNAPDFLGVPLPTWLINPWLYARAFCAVAPNPWSDGHPLSD 398
Query: 214 TTSGTPEPPFFPMAT*KASTVVSKRFWYP*APSCTTVPEEVKSA*LMSMALGLYAQARYG 35
T+ TP P F A * ST+ SKR Y S T V K A L M+ GL A+ G
Sbjct: 399 MTTLTPGVPAFSSAA*MESTMASKRLVYVNPLSFTVVLPGTKVAKLSWMSRGLPL*AK*G 578
Query: 34 *MLAMSGDPV 5
LA SG PV
Sbjct: 579 YTLASSGAPV 608
Score = 31.3 bits (62), Expect(2) = 6e-046
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +3 / -3
Query: 384 VEQNWGLFYPNMQHVYPISF* 446
+E+N+GLF PNM Y I+F*
Sbjct: 226 LEKNFGLFKPNMSPAYAITF* 164
>gb|BJ543926.1|BJ543926 BJ543926 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak35e23 5', mRNA sequence
Length = 266
Score = 184 bits (396), Expect = 7e-046
Identities = 72/80 (90%), Positives = 76/80 (95%)
Frame = +3 / +1
Query: 207 LVVSESGWPSGGGVQATPANARVYNQYLINHVGRGTPRHPGAIETYLFSMFNENQKESGV 386
LVVSESGWPS GG ATPANAR+YNQYLINHVGRGTPRHPGAIETY+FSMFNENQK++GV
Sbjct: 22 LVVSESGWPSAGGTAATPANARIYNQYLINHVGRGTPRHPGAIETYVFSMFNENQKDNGV 201
Query: 387 EQNWGLFYPNMQHVYPISF* 446
EQN GLFYPNMQHVYPISF*
Sbjct: 202 EQNXGLFYPNMQHVYPISF* 261
Score = 183 bits (394), Expect = 1e-045
Identities = 74/80 (92%), Positives = 74/80 (92%)
Frame = -2 / -1
Query: 445 QKLMG*TCCMLG*KSPQFCSTPLSFWFSLNMEKR*VSMAPGWRGVPRPTWLMRYWLYTLA 266
QKLMG*TCCMLG*KSPQFCSTPLSFWFSLNMEK *VSMAPGWRGVPRPTWLMRYWL LA
Sbjct: 260 QKLMG*TCCMLG*KSPQFCSTPLSFWFSLNMEKT*VSMAPGWRGVPRPTWLMRYWL*ILA 81
Query: 265 LAGVAWTPPPDGHPLSDTTS 206
LAGVA PP DGHPLSDTTS
Sbjct: 80 LAGVAAVPPADGHPLSDTTS 21
>gb|AV928558.1|AV928558 AV928558 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basdn24 3', mRNA sequence
Length = 658
Score = 153 bits (329), Expect(3) = 1e-045
Identities = 58/62 (93%), Positives = 62/62 (100%)
Frame = +3 / -3
Query: 261 ANARVYNQYLINHVGRGTPRHPGAIETYLFSMFNENQKESGVEQNWGLFYPNMQHVYPIS 440
ANAR+YNQYLINHVGRGTPRHPGAIETY+FSMFNENQK++GVEQNWGLFYPNMQHVYPIS
Sbjct: 557 ANARIYNQYLINHVGRGTPRHPGAIETYVFSMFNENQKDNGVEQNWGLFYPNMQHVYPIS 378
Query: 441 F* 446
F*
Sbjct: 377 F* 372
Score = 147 bits (315), Expect(2) = 6e-042
Identities = 59/62 (95%), Positives = 59/62 (95%)
Frame = -2 / +1
Query: 445 QKLMG*TCCMLG*KSPQFCSTPLSFWFSLNMEKR*VSMAPGWRGVPRPTWLMRYWLYTLA 266
QKLMG*TCCMLG*KSPQFCSTPLSFWFSLNMEK *VSMAPGWRGVPRPTWLMRYWL LA
Sbjct: 373 QKLMG*TCCMLG*KSPQFCSTPLSFWFSLNMEKT*VSMAPGWRGVPRPTWLMRYWL*ILA 552
Query: 265 LA 260
LA
Sbjct: 553 LA 558
Score = 45.5 bits (93), Expect(3) = 1e-045
Identities = 18/23 (78%), Positives = 18/23 (78%)
Frame = +3 / -2
Query: 192 GSGVPLVVSESGWPSGGGVQATP 260
GS V LVVSESGWPS GG ATP
Sbjct: 627 GSNVKLVVSESGWPSAGGTAATP 559
Score = 44.1 bits (90), Expect(2) = 6e-042
Identities = 18/23 (78%), Positives = 18/23 (78%)
Frame = -2 / +2
Query: 259 GVAWTPPPDGHPLSDTTSGTPEP 191
GVA PP DGHPLSDTTS T EP
Sbjct: 560 GVAAVPPADGHPLSDTTSFTLEP 628
Score = 23.1 bits (44), Expect(3) = 1e-045
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +3 / -1
Query: 162 AFYVAMGKNGG 194
AFY AM K+GG
Sbjct: 658 AFYTAMAKHGG 626
>gb|BU981210.1|BU981210 HA22P03r HA Hordeum vulgare subsp. vulgare cDNA clone HA22P03
5-PRIME, mRNA sequence
Length = 566
Score = 131 bits (281), Expect(3) = 4e-045
Identities = 52/81 (64%), Positives = 59/81 (72%)
Frame = +3 / +3
Query: 132 YQNLFDTTVDAFYVAMGKNGGSGVPLVVSESGWPSGGGVQATPANARVYNQYLINHVGRG 311
Y NLFD VDA Y A+ K G GV +VVSE+GWPS GG ATP NAR YNQ +I+HV RG
Sbjct: 213 YTNLFDAMVDAMYAALEKAGAPGVRVVVSETGWPSAGGFAATPENARAYNQGMIDHVARG 392
Query: 312 TPRHPGAIETYLFSMFNENQK 374
TP PG IE Y+F+MFNEN K
Sbjct: 393 TPNRPGPIEAYVFAMFNENMK 455
Score = 107 bits (228), Expect(3) = 2e-026
Identities = 47/81 (58%), Positives = 52/81 (64%)
Frame = -2 / -2
Query: 373 FWFSLNMEKR*VSMAPGWRGVPRPTWLMRYWLYTLALAGVAWTPPPDGHPLSDTTSGTPE 194
F FSLNM * SM PG GVPR TW + WLY A +GVA PP DGHP+SDTT+ TP
Sbjct: 454 FMFSLNMANT*ASMGPGLLGVPRATWSIMPWLYARAFSGVAANPPADGHPVSDTTTLTPG 275
Query: 193 PPFFPMAT*KASTVVSKRFWY 131
P F A AST+ SKRF Y
Sbjct: 274 APAFSSAAYMASTMASKRFVY 212
Score = 52.8 bits (109), Expect(3) = 4e-045
Identities = 18/43 (41%), Positives = 29/43 (67%)
Frame = +3 / +3
Query: 6 TGSPLMANIYPYLAWAYNPSAMDMSYALFTSSGTVVQDGAYGY 134
TG+PL+AN+YPY+A+ +P + ++YA F T V+D G+
Sbjct: 81 TGAPLLANVYPYIAYRNSPRDIQLNYATFQPGATAVRDAGNGH 209
Score = 35.9 bits (72), Expect(3) = 4e-045
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +3 / +3
Query: 387 EQNWGLFYPNMQHVYPISF*RTTVNRTDP 473
E+N+GLFYPN VYP+ F ++ ++P
Sbjct: 471 ERNFGLFYPNKSPVYPMKFK*RSLGGSEP 557
Score = 25.8 bits (50), Expect(3) = 2e-026
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = -2 / -2
Query: 436 MG*TCCMLG*KSPQFCS 386
MG*T +LG*KSP+F S
Sbjct: 520 MG*TGDLLG*KSPKFLS 470
Score = 23.5 bits (45), Expect(3) = 2e-026
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -3 / -3
Query: 60 GCMPRPGTGRCWP*AATR 7
GC R GR WP AA R
Sbjct: 135 GCCGRRCRGRRWPAAARR 82
>gb|AV928246.1|AV928246 AV928246 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd27i24 3', mRNA sequence
Length = 641
Score = 153 bits (329), Expect(2) = 4e-042
Identities = 58/62 (93%), Positives = 62/62 (100%)
Frame = +3 / -1
Query: 261 ANARVYNQYLINHVGRGTPRHPGAIETYLFSMFNENQKESGVEQNWGLFYPNMQHVYPIS 440
ANAR+YNQYLINHVGRGTPRHPGAIETY+FSMFNENQK++GVEQNWGLFYPNMQHVYPIS
Sbjct: 557 ANARIYNQYLINHVGRGTPRHPGAIETYVFSMFNENQKDNGVEQNWGLFYPNMQHVYPIS 378
Query: 441 F* 446
F*
Sbjct: 377 F* 372
Score = 147 bits (315), Expect(2) = 2e-039
Identities = 59/62 (95%), Positives = 59/62 (95%)
Frame = -2 / +1
Query: 445 QKLMG*TCCMLG*KSPQFCSTPLSFWFSLNMEKR*VSMAPGWRGVPRPTWLMRYWLYTLA 266
QKLMG*TCCMLG*KSPQFCSTPLSFWFSLNMEK *VSMAPGWRGVPRPTWLMRYWL LA
Sbjct: 373 QKLMG*TCCMLG*KSPQFCSTPLSFWFSLNMEKT*VSMAPGWRGVPRPTWLMRYWL*ILA 552
Query: 265 LA 260
LA
Sbjct: 553 LA 558
Score = 38.2 bits (77), Expect(2) = 4e-042
Identities = 15/22 (68%), Positives = 15/22 (68%)
Frame = +3 / -2
Query: 195 SGVPLVVSESGWPSGGGVQATP 260
S V LVVSESGWPS GG P
Sbjct: 625 SNVKLVVSESGWPSAGGTAXDP 560
Score = 35.9 bits (72), Expect(2) = 2e-039
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = -2 / +3
Query: 244 PPPDGHPLSDTTSGTPE 194
PP DGHPLSDTTS T E
Sbjct: 576 PPADGHPLSDTTSFTLE 626
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 362,159,919
Number of Sequences: 312970
Number of extensions: 5566418
Number of successful extensions: 60836
Number of sequences better than 1.0e-020: 148
length of database: 58,378,179
effective HSP length: 52
effective length of database: 42,103,739
effective search space used: 10736453445
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)