TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3670912.2.1
(844 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CB882049.1|CB882049 HM11L11w HM Hordeum vulgare subsp. v... 244 2e-082
gb|BU990224.1|BU990224 HF24H03r HF Hordeum vulgare subsp. v... 244 2e-082
gb|BU989823.1|BU989823 HF22M18r HF Hordeum vulgare subsp. v... 244 3e-081
gb|BU990169.1|BU990169 HF24E14r HF Hordeum vulgare subsp. v... 244 3e-081
gb|BG310118.1|BG310118 HVSMEc0016N14f Hordeum vulgare seedl... 244 2e-079
gb|BQ768383.1|BQ768383 EBro08_SQ011_F13_R root, 3 week, dro... 244 4e-077
gb|BI778700.2|BI778700 EBro01_SQ001_C06_R root, 3 week, hyd... 225 6e-077
gb|BJ467713.1|BJ467713 BJ467713 K. Sato unpublished cDNA li... 219 6e-077
gb|BQ768801.1|BQ768801 EBro08_SQ012_P15_R root, 3 week, dro... 222 2e-070
emb|Z49145.1|HVPAL2MR H.vulgare partial PAL mRNA for phenyl... 221 4e-070
gb|AV918830.1|AV918830 AV918830 K. Sato unpublished cDNA li... 244 4e-070
gb|BI777236.2|BI777236 EBro03_SQ002_I15_R root, 3 week, wat... 231 6e-070
gb|BF264601.3|BF264601 HV_CEa0009N21f Hordeum vulgare seedl... 218 2e-069
gb|BQ765219.1|BQ765219 EBro03_SQ006_F15_R root, 3 week, wat... 218 2e-069
gb|BQ765192.1|BQ765192 EBro03_SQ006_A15_R root, 3 week, wat... 218 2e-069
gb|CB881918.1|CB881918 HM11E17w HM Hordeum vulgare subsp. v... 217 4e-069
gb|BQ767217.1|BQ767217 EBro08_SQ008_E10_R root, 3 week, dro... 223 2e-067
gb|BQ767013.1|BQ767013 EBro08_SQ007_A24_R root, 3 week, dro... 215 1e-066
gb|BQ756566.1|BQ756566 EBem09_SQ003_B12_R embryo, 1 Day ger... 244 5e-065
gb|AL503163.1|AL503163 AL503163 Hordeum vulgare Barke roots... 244 5e-064
gb|AV919026.1|AV919026 AV919026 K. Sato unpublished cDNA li... 223 1e-063
gb|AV921319.1|AV921319 AV921319 K. Sato unpublished cDNA li... 213 4e-063
gb|BF258018.2|BF258018 HVSMEf0014I06f Hordeum vulgare seedl... 190 2e-062
gb|BJ459164.1|BJ459164 BJ459164 K. Sato unpublished cDNA li... 218 2e-061
gb|BM370557.2|BM370557 EBro08_SQ004_J10_R root, 3 week, dro... 219 4e-061
gb|AV918666.1|AV918666 AV918666 K. Sato unpublished cDNA li... 218 2e-060
gb|AL501352.1|AL501352 AL501352 Hordeum vulgare Barke roots... 223 1e-057
gb|BE438184.1|BE438184 SFR010.H12F990722 ITEC SFR Barley Le... 205 1e-057
gb|AV928876.1|AV928876 AV928876 K. Sato unpublished cDNA li... 203 6e-057
gb|AL500991.1|AL500991 AL500991 Hordeum vulgare Barke roots... 220 8e-057
gb|AL501962.1|AL501962 AL501962 Hordeum vulgare Barke roots... 220 8e-057
gb|BQ662656.1|BQ662656 HS03H24u HS Hordeum vulgare subsp. v... 220 8e-057
gb|BJ468382.1|BJ468382 BJ468382 K. Sato unpublished cDNA li... 213 2e-056
gb|BJ466939.1|BJ466939 BJ466939 K. Sato unpublished cDNA li... 215 4e-055
gb|BQ468898.1|BQ468898 HM02L09r HM Hordeum vulgare subsp. v... 215 4e-055
gb|AV919053.1|AV919053 AV919053 K. Sato unpublished cDNA li... 203 4e-055
gb|CB858981.1|CB858981 HI08O15w HI Hordeum vulgare subsp. v... 212 2e-054
emb|Z49146.1|HVPAL3MR H.vulgare partial PAL mRNA for phenyl... 176 5e-054
gb|BF265916.1|BF265916 HV_CEa0013K19f Hordeum vulgare seedl... 176 5e-054
gb|BQ765924.1|BQ765924 EBro03_SQ008_E16_R root, 3 week, wat... 176 5e-054
gb|BQ763878.1|BQ763878 EBro03_SQ005_L15_R root, 3 week, wat... 176 5e-054
gb|AV921618.1|AV921618 AV921618 K. Sato unpublished cDNA li... 210 6e-054
gb|AV928881.1|AV928881 AV928881 K. Sato unpublished cDNA li... 208 3e-053
gb|BU968202.1|BU968202 HB06L24r BC Hordeum vulgare subsp. v... 208 4e-053
gb|BQ760542.1|BQ760542 EBro03_SQ001_F05_R root, 3 week, wat... 207 8e-053
gb|BQ762717.1|BQ762717 EBro02_SQ004_I20_R root, 3 week, hyd... 205 2e-052
gb|BG414191.1|BG414191 HVSMEk0001A07f Hordeum vulgare testa... 176 1e-051
gb|BG365997.1|BG365997 HVSMEi0004M09f Hordeum vulgare 20 DA... 177 9e-051
gb|AV917458.1|AV917458 AV917458 K. Sato unpublished cDNA li... 176 2e-050
gb|BI959849.1|BI959849 HVSMEn0022A20f Hordeum vulgare rachi... 174 4e-050
gb|BI956268.1|BI956268 HVSMEn0001M16f Hordeum vulgare rachi... 170 5e-050
gb|AL502364.1|AL502364 AL502364 Hordeum vulgare Barke roots... 182 1e-049
gb|BQ765396.1|BQ765396 EBro03_SQ007_E05_R root, 3 week, wat... 195 3e-049
gb|BE437808.1|BE437808 SFR007.G02F990625 ITEC SFR Barley Le... 194 4e-049
gb|BE437962.1|BE437962 SFR009.D04F990512 ITEC SFR Barley Le... 194 4e-049
gb|BI956808.1|BI956808 HVSMEn0005G21f Hordeum vulgare rachi... 170 1e-048
gb|BE214036.1|BE214036 HV_CEb0001P14f Hordeum vulgare seedl... 129 2e-048
gb|AV928635.1|AV928635 AV928635 K. Sato unpublished cDNA li... 176 9e-048
gb|AV931028.1|AV931028 AV931028 K. Sato unpublished cDNA li... 176 1e-047
gb|AJ462386.1|AJ462386 AJ462386 S00002 Hordeum vulgare subs... 188 5e-047
gb|BQ766648.1|BQ766648 EBro08_SQ006_A20_R root, 3 week, dro... 93 2e-046
gb|BI947758.1|BI947758 HVSMEl0006M12f Hordeum vulgare spike... 185 3e-046
gb|BQ469057.1|BQ469057 HM03D09r HM Hordeum vulgare subsp. v... 147 1e-045
gb|AV928004.1|AV928004 AV928004 K. Sato unpublished cDNA li... 176 2e-044
gb|AV919005.1|AV919005 AV919005 K. Sato unpublished cDNA li... 176 2e-043
gb|AV931810.1|AV931810 AV931810 K. Sato unpublished cDNA li... 176 2e-043
gb|CB880955.1|CB880955 HM08F11w HM Hordeum vulgare subsp. v... 173 9e-043
gb|AV931809.1|AV931809 AV931809 K. Sato unpublished cDNA li... 171 3e-042
gb|AV930308.1|AV930308 AV930308 K. Sato unpublished cDNA li... 171 6e-042
gb|BI959802.1|BI959802 HVSMEn0021J20f Hordeum vulgare rachi... 138 1e-041
gb|BF628845.2|BF628845 HVSMEb0008N10f Hordeum vulgare seedl... 133 2e-041
gb|AV930975.1|AV930975 AV930975 K. Sato unpublished cDNA li... 169 2e-041
gb|BI955715.1|BI955715 HVSMEm0024C22f Hordeum vulgare green... 166 2e-040
gb|BI959376.1|BI959376 HVSMEn0019H01f Hordeum vulgare rachi... 164 7e-040
gb|BM372199.2|BM372199 EBro03_SQ004_E20_R root, 3 week, wat... 131 2e-038
gb|AL501291.1|AL501291 AL501291 Hordeum vulgare Barke roots... 144 7e-038
gb|BI957141.1|BI957141 HVSMEn0007L14f Hordeum vulgare rachi... 97 7e-038
gb|AV931622.1|AV931622 AV931622 K. Sato unpublished cDNA li... 156 1e-037
gb|BE421683.1|BE421683 HWM012cG.10r ITEC HWM Barley Leaf Li... 155 3e-037
gb|BM443147.2|BM443147 EBro02_SQ002_N12_R root, 3 week, hyd... 142 5e-037
gb|BM816193.1|BM816193 HC109D04_T3.ab1 HC Hordeum vulgare s... 77 1e-036
gb|BQ661267.1|BQ661267 HM02L09u HM Hordeum vulgare subsp. v... 152 2e-036
gb|BF261029.2|BF261029 HVSMEf0023J05f Hordeum vulgare seedl... 116 2e-036
gb|BQ760454.1|BQ760454 EBro02_SQ002_M23_R root, 3 week, hyd... 151 5e-036
gb|AV927824.1|AV927824 AV927824 K. Sato unpublished cDNA li... 85 1e-035
gb|BJ468508.1|BJ468508 BJ468508 K. Sato unpublished cDNA li... 149 3e-035
gb|CA016735.1|CA016735 HV06I16u HV Hordeum vulgare subsp. v... 149 3e-035
gb|BE214612.2|BE214612 HV_CEb0003P13f Hordeum vulgare seedl... 112 3e-035
gb|AL505275.1|AL505275 AL505275 Hordeum vulgare Barke roots... 122 1e-034
gb|AL502685.1|AL502685 AL502685 Hordeum vulgare Barke roots... 144 4e-034
gb|BJ465265.1|BJ465265 BJ465265 K. Sato unpublished cDNA li... 142 2e-033
gb|AL502617.1|AL502617 AL502617 Hordeum vulgare Barke roots... 123 6e-033
gb|AL501346.1|AL501346 AL501346 Hordeum vulgare Barke roots... 141 6e-033
gb|AL503927.1|AL503927 AL503927 Hordeum vulgare Barke roots... 113 7e-033
gb|BJ452093.1|BJ452093 BJ452093 K. Sato unpublished cDNA li... 139 1e-032
gb|BQ767318.1|BQ767318 EBro08_SQ008_F18_R root, 3 week, dro... 73 3e-032
gb|AL501349.1|AL501349 AL501349 Hordeum vulgare Barke roots... 135 4e-031
gb|AJ427587.1|AJ427587 AJ427587 Hordeum vulgare subsp. vulg... 89 6e-031
gb|BQ765456.1|BQ765456 EBro03_SQ007_P05_R root, 3 week, wat... 133 1e-030
gb|AV913531.1|AV913531 AV913531 K. Sato unpublished cDNA li... 67 1e-030
gb|BI959878.1|BI959878 HVSMEn0022D03f Hordeum vulgare rachi... 110 2e-030
gb|BE438019.1|BE438019 SFR010.A02F990628 ITEC SFR Barley Le... 131 4e-030
gb|AL501348.1|AL501348 AL501348 Hordeum vulgare Barke roots... 131 4e-030
gb|AL501350.1|AL501350 AL501350 Hordeum vulgare Barke roots... 125 4e-028
gb|BF259754.3|BF259754 HVSMEf0020C19f Hordeum vulgare seedl... 125 4e-028
gb|BQ664513.1|BQ664513 HV03K13u HV Hordeum vulgare subsp. v... 125 4e-028
gb|BI777223.2|BI777223 EBro03_SQ002_H18_R root, 3 week, wat... 125 4e-028
gb|AV912724.1|AV912724 AV912724 K. Sato unpublished cDNA li... 77 4e-028
gb|AL503142.1|AL503142 AL503142 Hordeum vulgare Barke roots... 124 5e-028
gb|BI957553.1|BI957553 HVSMEn0010B19f Hordeum vulgare rachi... 87 1e-027
gb|BI957512.1|BI957512 HVSMEn0009P04f Hordeum vulgare rachi... 85 3e-027
gb|AL505417.1|AL505417 AL505417 Hordeum vulgare Barke roots... 85 4e-027
gb|AV926975.1|AV926975 AV926975 K. Sato unpublished cDNA li... 85 4e-027
gb|BI959574.1|BI959574 HVSMEn0020E07f Hordeum vulgare rachi... 117 6e-026
gb|AL502072.1|AL502072 AL502072 Hordeum vulgare Barke roots... 116 1e-025
gb|BQ661371.1|BQ661371 HM03D09u HM Hordeum vulgare subsp. v... 116 1e-025
gb|BQ765937.1|BQ765937 EBro03_SQ008_G18_R root, 3 week, wat... 115 4e-025
gb|BI959811.1|BI959811 HVSMEn0021K21f Hordeum vulgare rachi... 76 2e-024
gb|BE558376.3|BE558376 HV_CEb0017H01f Hordeum vulgare seedl... 107 9e-023
gb|BG415885.2|BG415885 HVSMEk0008K04f Hordeum vulgare testa... 106 2e-022
gb|BI779552.2|BI779552 EBro01_SQ004_G11_R root, 3 week, hyd... 41 2e-022
gb|BM443256.2|BM443256 EBro02_SQ003_E13_R root, 3 week, hyd... 53 2e-022
gb|BI958293.1|BI958293 HVSMEn0014E11f Hordeum vulgare rachi... 68 1e-021
>gb|CB882049.1|CB882049 HM11L11w HM Hordeum vulgare subsp. vulgare cDNA clone HM11L11
3-PRIME, mRNA sequence
Length = 658
Score = 244 bits (527), Expect(5) = 2e-082
Identities = 99/115 (86%), Positives = 108/115 (93%)
Frame = +2 / -3
Query: 230 NGDAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRF 409
NGD ER ++TSIFAKVAEFEQ +RAALPKEVEAARA+VENG+PL PNRIK+CRSYPLY+F
Sbjct: 425 NGDGERALETSIFAKVAEFEQNIRAALPKEVEAARASVENGTPLAPNRIKDCRSYPLYQF 246
Query: 410 VREEVGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLPLC*A 574
VRE GTEYLTGEKTRSPGEELNKVLVA+N+RKHIDPLLECLKEWNG PLPLC*A
Sbjct: 245 VREVCGTEYLTGEKTRSPGEELNKVLVAMNERKHIDPLLECLKEWNGAPLPLC*A 81
Score = 207 bits (447), Expect(5) = 9e-071
Identities = 95/134 (70%), Positives = 103/134 (76%)
Frame = -2 / +1
Query: 633 VLCCYTFVFLLYTLSFSAGAAQQSGRGSPFHSLRHSSSGSMCLRWLMATSTLFSSSPGDL 454
+ C F + AQQSGRG+PFHSLRHSSSGSMCLR MATSTLFSSSPGD
Sbjct: 22 ITLCVRVFFSFFWSYLLLSTAQQSGRGAPFHSLRHSSSGSMCLRSFMATSTLFSSSPGDR 201
Query: 453 VFSPVRYSVPTSSRTNRYSG*DRHSLILLGTRGLPFSTAARAASTSLGSAARTCCSNSAT 274
VFSPVRYSVP +SRTN SG*+R SLI LG G+PFST ARAASTSLGSAAR CSNSAT
Sbjct: 202 VFSPVRYSVPHTSRTNW*SG*ERQSLIRLGASGVPFSTDARAASTSLGSAARMFCSNSAT 381
Query: 273 LAKMDVSTSRSASP 232
LAKM+VS +RS SP
Sbjct: 382 LAKMEVSRARSPSP 423
Score = 155 bits (332), Expect(2) = 2e-041
Identities = 71/90 (78%), Positives = 75/90 (83%)
Frame = -1 / +3
Query: 571 SAERQGLAVPLLEALEQRVDVLALVDGHEHLVQLLAGRPRLLAGQVLGADLLAHEPVQRV 392
SAE QG AVPL EAL+QRVDVLALV GH+HLVQLL GRP LLAGQVLGA LA E V+ V
Sbjct: 84 SAEWQGRAVPLFEALQQRVDVLALVHGHQHLVQLLPGRPCLLAGQVLGAAHLADELVEWV 263
Query: 391 GPALLDPVGDQRAAVLHGRARGFHLLGQRR 302
G A+LDPVG QR AVLHGRARG HLLGQRR
Sbjct: 264 GAAVLDPVGSQRRAVLHGRARGLHLLGQRR 353
Score = 104 bits (222), Expect(2) = 3e-023
Identities = 48/72 (66%), Positives = 50/72 (69%)
Frame = +1 / -2
Query: 358 SGPQQDQGXXXXXXXXXXXXGGRHRVPDRREDEVARRGAEQGARGHQPAQAHRPAARVPQ 537
+G Q DQG G RHRVPDRRED VAR GAEQGA GH+ AQAHRPAA VPQ
Sbjct: 297 AGSQPDQGLPLLPTLPVRPRGVRHRVPDRREDTVARGGAEQGAGGHERAQAHRPAAGVPQ 118
Query: 538 GVERRAPAALLS 573
VERRAPA LLS
Sbjct: 117 RVERRAPATLLS 82
Score = 40.9 bits (83), Expect(5) = 2e-082
Identities = 17/19 (89%), Positives = 17/19 (89%)
Frame = +1 / -3
Query: 172 PNYALMQKXRAVLVEHALA 228
PNY LMQK RAVLVEHALA
Sbjct: 482 PNYPLMQKLRAVLVEHALA 426
Score = 37.7 bits (76), Expect(5) = 9e-071
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = -2 / +3
Query: 228 GQRVLDQHRAXFLHQRVV 175
GQRVLDQHR LHQRVV
Sbjct: 426 GQRVLDQHRPQLLHQRVV 479
Score = 36.3 bits (73), Expect(2) = 2e-041
Identities = 19/47 (40%), Positives = 21/47 (44%)
Frame = -3 / +3
Query: 176 LGAAXXXXXRKHRLAVXXXXXXXXXXXXXXXXXXGVQAQGLLGHLRH 36
+GAA R+HRLAV V AQGLLGHL H
Sbjct: 477 VGAARVVRVREHRLAVDRGQQILLAEAGDVEAAHVVHAQGLLGHLHH 617
Score = 34.5 bits (69), Expect(5) = 2e-082
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +3 / -3
Query: 135 EAVFXYADDPCSP 173
EAVF YADDPCSP
Sbjct: 518 EAVFAYADDPCSP 480
Score = 34.1 bits (68), Expect(5) = 2e-082
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = +2 / -3
Query: 77 GRLHNARFCEKDLQTAI 127
G LH ARFCEKDL TAI
Sbjct: 575 GGLHIARFCEKDLLTAI 525
Score = 33.1 bits (66), Expect(5) = 9e-071
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -2 / +1
Query: 126 IAVCRSFSQKRALWSRP 76
IAV RSFSQKRA+W P
Sbjct: 526 IAVSRSFSQKRAMWRPP 576
Score = 32.7 bits (65), Expect(5) = 9e-071
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = -1 / +1
Query: 169 LHGSSAYXNTASRS 128
LHGSSAY NTASRS
Sbjct: 484 LHGSSAYANTASRS 525
Score = 31.3 bits (62), Expect(5) = 9e-071
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = -1 / +1
Query: 82 PPLAFRLRDFLATCVT 35
PP+ F LR FLATC+T
Sbjct: 571 PPMLFMLRVFLATCIT 618
Score = 28.6 bits (56), Expect(5) = 2e-082
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = +2 / -2
Query: 38 DAGGQEVPEPERQGR 82
DAGGQE PE E+ GR
Sbjct: 615 DAGGQEDPEHEQHGR 571
Score = 25.8 bits (50), Expect(2) = 3e-023
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = +1 / -1
Query: 43 RWPRSP*A*TPGAA 84
RWPR P*A*T AA
Sbjct: 610 RWPRRP*A*TTWAA 569
>gb|BU990224.1|BU990224 HF24H03r HF Hordeum vulgare subsp. vulgare cDNA clone HF24H03
5-PRIME, mRNA sequence
Length = 591
Score = 244 bits (527), Expect(5) = 2e-082
Identities = 99/115 (86%), Positives = 108/115 (93%)
Frame = +2 / +3
Query: 230 NGDAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRF 409
NGD ER ++TSIFAKVAEFEQ +RAALPKEVEAARA+VENG+PL PNRIK+CRSYPLY+F
Sbjct: 225 NGDGERALETSIFAKVAEFEQNIRAALPKEVEAARASVENGTPLAPNRIKDCRSYPLYQF 404
Query: 410 VREEVGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLPLC*A 574
VRE GTEYLTGEKTRSPGEELNKVLVA+N+RKHIDPLLECLKEWNG PLPLC*A
Sbjct: 405 VREVCGTEYLTGEKTRSPGEELNKVLVAMNERKHIDPLLECLKEWNGAPLPLC*A 569
Score = 205 bits (443), Expect(5) = 3e-070
Identities = 93/114 (81%), Positives = 99/114 (86%)
Frame = -2 / -3
Query: 573 AQQSGRGSPFHSLRHSSSGSMCLRWLMATSTLFSSSPGDLVFSPVRYSVPTSSRTNRYSG 394
AQQSGRG+PFHSLRHSSSGSMCLR MATSTLFSSSPGD VFSPVRYSVP +SRTN SG
Sbjct: 568 AQQSGRGAPFHSLRHSSSGSMCLRSFMATSTLFSSSPGDRVFSPVRYSVPHTSRTNW*SG 389
Query: 393 *DRHSLILLGTRGLPFSTAARAASTSLGSAARTCCSNSATLAKMDVSTSRSASP 232
*+R SLI LG G+PFST ARAASTSLGSAAR CSNSATLAKM+VS +RS SP
Sbjct: 388 *ERQSLIRLGASGVPFSTDARAASTSLGSAARMFCSNSATLAKMEVSRARSPSP 227
Score = 155 bits (332), Expect(2) = 2e-041
Identities = 71/90 (78%), Positives = 75/90 (83%)
Frame = -1 / -2
Query: 571 SAERQGLAVPLLEALEQRVDVLALVDGHEHLVQLLAGRPRLLAGQVLGADLLAHEPVQRV 392
SAE QG AVPL EAL+QRVDVLALV GH+HLVQLL GRP LLAGQVLGA LA E V+ V
Sbjct: 566 SAEWQGRAVPLFEALQQRVDVLALVHGHQHLVQLLPGRPCLLAGQVLGAAHLADELVEWV 387
Query: 391 GPALLDPVGDQRAAVLHGRARGFHLLGQRR 302
G A+LDPVG QR AVLHGRARG HLLGQRR
Sbjct: 386 GAAVLDPVGSQRRAVLHGRARGLHLLGQRR 297
Score = 104 bits (222), Expect(2) = 3e-023
Identities = 48/72 (66%), Positives = 50/72 (69%)
Frame = +1 / +2
Query: 358 SGPQQDQGXXXXXXXXXXXXGGRHRVPDRREDEVARRGAEQGARGHQPAQAHRPAARVPQ 537
+G Q DQG G RHRVPDRRED VAR GAEQGA GH+ AQAHRPAA VPQ
Sbjct: 353 AGSQPDQGLPLLPTLPVRPRGVRHRVPDRREDTVARGGAEQGAGGHERAQAHRPAAGVPQ 532
Query: 538 GVERRAPAALLS 573
VERRAPA LLS
Sbjct: 533 RVERRAPATLLS 568
Score = 40.9 bits (83), Expect(5) = 2e-082
Identities = 17/19 (89%), Positives = 17/19 (89%)
Frame = +1 / +3
Query: 172 PNYALMQKXRAVLVEHALA 228
PNY LMQK RAVLVEHALA
Sbjct: 168 PNYPLMQKLRAVLVEHALA 224
Score = 37.7 bits (76), Expect(5) = 3e-070
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = -2 / -2
Query: 228 GQRVLDQHRAXFLHQRVV 175
GQRVLDQHR LHQRVV
Sbjct: 224 GQRVLDQHRPQLLHQRVV 171
Score = 36.3 bits (73), Expect(2) = 2e-041
Identities = 19/47 (40%), Positives = 21/47 (44%)
Frame = -3 / -2
Query: 176 LGAAXXXXXRKHRLAVXXXXXXXXXXXXXXXXXXGVQAQGLLGHLRH 36
+GAA R+HRLAV V AQGLLGHL H
Sbjct: 173 VGAARVVRVREHRLAVDRGQQILLAEAGDVEAAHVVHAQGLLGHLHH 33
Score = 34.5 bits (69), Expect(5) = 2e-082
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +3 / +3
Query: 135 EAVFXYADDPCSP 173
EAVF YADDPCSP
Sbjct: 132 EAVFAYADDPCSP 170
Score = 34.1 bits (68), Expect(5) = 2e-082
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = +2 / +3
Query: 77 GRLHNARFCEKDLQTAI 127
G LH ARFCEKDL TAI
Sbjct: 75 GGLHIARFCEKDLLTAI 125
Score = 33.1 bits (66), Expect(5) = 3e-070
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -2 / -3
Query: 126 IAVCRSFSQKRALWSRP 76
IAV RSFSQKRA+W P
Sbjct: 124 IAVSRSFSQKRAMWRPP 74
Score = 32.7 bits (65), Expect(5) = 3e-070
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = -1 / -3
Query: 169 LHGSSAYXNTASRS 128
LHGSSAY NTASRS
Sbjct: 166 LHGSSAYANTASRS 125
Score = 31.3 bits (62), Expect(5) = 3e-070
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = -1 / -3
Query: 82 PPLAFRLRDFLATCVT 35
PP+ F LR FLATC+T
Sbjct: 79 PPMLFMLRVFLATCIT 32
Score = 28.6 bits (56), Expect(5) = 2e-082
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = +2 / +2
Query: 38 DAGGQEVPEPERQGR 82
DAGGQE PE E+ GR
Sbjct: 35 DAGGQEDPEHEQHGR 79
Score = 25.8 bits (50), Expect(2) = 3e-023
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = +1 / +1
Query: 43 RWPRSP*A*TPGAA 84
RWPR P*A*T AA
Sbjct: 40 RWPRRP*A*TTWAA 81
>gb|BU989823.1|BU989823 HF22M18r HF Hordeum vulgare subsp. vulgare cDNA clone HF22M18
5-PRIME, mRNA sequence
Length = 592
Score = 244 bits (527), Expect(5) = 3e-081
Identities = 99/115 (86%), Positives = 108/115 (93%)
Frame = +2 / +1
Query: 230 NGDAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRF 409
NGD ER ++TSIFAKVAEFEQ +RAALPKEVEAARA+VENG+PL PNRIK+CRSYPLY+F
Sbjct: 226 NGDGERALETSIFAKVAEFEQNIRAALPKEVEAARASVENGTPLAPNRIKDCRSYPLYQF 405
Query: 410 VREEVGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLPLC*A 574
VRE GTEYLTGEKTRSPGEELNKVLVA+N+RKHIDPLLECLKEWNG PLPLC*A
Sbjct: 406 VREVCGTEYLTGEKTRSPGEELNKVLVAMNERKHIDPLLECLKEWNGAPLPLC*A 570
Score = 205 bits (443), Expect(5) = 1e-068
Identities = 93/114 (81%), Positives = 99/114 (86%)
Frame = -2 / -3
Query: 573 AQQSGRGSPFHSLRHSSSGSMCLRWLMATSTLFSSSPGDLVFSPVRYSVPTSSRTNRYSG 394
AQQSGRG+PFHSLRHSSSGSMCLR MATSTLFSSSPGD VFSPVRYSVP +SRTN SG
Sbjct: 569 AQQSGRGAPFHSLRHSSSGSMCLRSFMATSTLFSSSPGDRVFSPVRYSVPHTSRTNW*SG 390
Query: 393 *DRHSLILLGTRGLPFSTAARAASTSLGSAARTCCSNSATLAKMDVSTSRSASP 232
*+R SLI LG G+PFST ARAASTSLGSAAR CSNSATLAKM+VS +RS SP
Sbjct: 389 *ERQSLIRLGASGVPFSTDARAASTSLGSAARMFCSNSATLAKMEVSRARSPSP 228
Score = 155 bits (332), Expect(2) = 1e-038
Identities = 71/90 (78%), Positives = 75/90 (83%)
Frame = -1 / -2
Query: 571 SAERQGLAVPLLEALEQRVDVLALVDGHEHLVQLLAGRPRLLAGQVLGADLLAHEPVQRV 392
SAE QG AVPL EAL+QRVDVLALV GH+HLVQLL GRP LLAGQVLGA LA E V+ V
Sbjct: 567 SAEWQGRAVPLFEALQQRVDVLALVHGHQHLVQLLPGRPCLLAGQVLGAAHLADELVEWV 388
Query: 391 GPALLDPVGDQRAAVLHGRARGFHLLGQRR 302
G A+LDPVG QR AVLHGRARG HLLGQRR
Sbjct: 387 GAAVLDPVGSQRRAVLHGRARGLHLLGQRR 298
Score = 104 bits (222), Expect(2) = 1e-022
Identities = 48/72 (66%), Positives = 50/72 (69%)
Frame = +1 / +3
Query: 358 SGPQQDQGXXXXXXXXXXXXGGRHRVPDRREDEVARRGAEQGARGHQPAQAHRPAARVPQ 537
+G Q DQG G RHRVPDRRED VAR GAEQGA GH+ AQAHRPAA VPQ
Sbjct: 354 AGSQPDQGLPLLPTLPVRPRGVRHRVPDRREDTVARGGAEQGAGGHERAQAHRPAAGVPQ 533
Query: 538 GVERRAPAALLS 573
VERRAPA LLS
Sbjct: 534 RVERRAPATLLS 569
Score = 40.9 bits (83), Expect(5) = 3e-081
Identities = 17/19 (89%), Positives = 17/19 (89%)
Frame = +1 / +1
Query: 172 PNYALMQKXRAVLVEHALA 228
PNY LMQK RAVLVEHALA
Sbjct: 169 PNYPLMQKLRAVLVEHALA 225
Score = 37.7 bits (76), Expect(5) = 1e-068
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = -2 / -2
Query: 228 GQRVLDQHRAXFLHQRVV 175
GQRVLDQHR LHQRVV
Sbjct: 225 GQRVLDQHRPQLLHQRVV 172
Score = 34.5 bits (69), Expect(5) = 3e-081
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +3 / +1
Query: 135 EAVFXYADDPCSP 173
EAVF YADDPCSP
Sbjct: 133 EAVFAYADDPCSP 171
Score = 32.7 bits (65), Expect(5) = 1e-068
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = -1 / -3
Query: 169 LHGSSAYXNTASRS 128
LHGSSAY NTASRS
Sbjct: 167 LHGSSAYANTASRS 126
Score = 32.2 bits (64), Expect(5) = 3e-081
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = +2 / +1
Query: 83 LHNARFCEKDLQTAI 127
LH ARFCEKDL TAI
Sbjct: 82 LHIARFCEKDLLTAI 126
Score = 31.3 bits (62), Expect(5) = 1e-068
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = -2 / -3
Query: 126 IAVCRSFSQKRALW 85
IAV RSFSQKRA+W
Sbjct: 125 IAVSRSFSQKRAMW 84
Score = 28.1 bits (55), Expect(5) = 1e-068
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = -1 / -1
Query: 79 PLAFRLRDFLATCVT 35
P+ F LR FLATC+T
Sbjct: 76 PMLFMLRVFLATCIT 32
Score = 27.2 bits (53), Expect(2) = 1e-038
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -3 / -3
Query: 71 VQAQGLLGHLRH 36
V AQGLLGHL H
Sbjct: 68 VHAQGLLGHLHH 33
Score = 26.3 bits (51), Expect(5) = 3e-081
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +2 / +2
Query: 38 DAGGQEVPEPERQG 79
DAGGQE PE E+ G
Sbjct: 35 DAGGQEDPEHEQHG 76
Score = 23.5 bits (45), Expect(2) = 1e-022
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +1 / +1
Query: 43 RWPRSP*A*T 72
RWPR P*A*T
Sbjct: 40 RWPRRP*A*T 69
>gb|BU990169.1|BU990169 HF24E14r HF Hordeum vulgare subsp. vulgare cDNA clone HF24E14
5-PRIME, mRNA sequence
Length = 592
Score = 244 bits (527), Expect(5) = 3e-081
Identities = 99/115 (86%), Positives = 108/115 (93%)
Frame = +2 / +1
Query: 230 NGDAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRF 409
NGD ER ++TSIFAKVAEFEQ +RAALPKEVEAARA+VENG+PL PNRIK+CRSYPLY+F
Sbjct: 226 NGDGERALETSIFAKVAEFEQNIRAALPKEVEAARASVENGTPLAPNRIKDCRSYPLYQF 405
Query: 410 VREEVGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLPLC*A 574
VRE GTEYLTGEKTRSPGEELNKVLVA+N+RKHIDPLLECLKEWNG PLPLC*A
Sbjct: 406 VREVCGTEYLTGEKTRSPGEELNKVLVAMNERKHIDPLLECLKEWNGAPLPLC*A 570
Score = 205 bits (443), Expect(5) = 1e-068
Identities = 93/114 (81%), Positives = 99/114 (86%)
Frame = -2 / -3
Query: 573 AQQSGRGSPFHSLRHSSSGSMCLRWLMATSTLFSSSPGDLVFSPVRYSVPTSSRTNRYSG 394
AQQSGRG+PFHSLRHSSSGSMCLR MATSTLFSSSPGD VFSPVRYSVP +SRTN SG
Sbjct: 569 AQQSGRGAPFHSLRHSSSGSMCLRSFMATSTLFSSSPGDRVFSPVRYSVPHTSRTNW*SG 390
Query: 393 *DRHSLILLGTRGLPFSTAARAASTSLGSAARTCCSNSATLAKMDVSTSRSASP 232
*+R SLI LG G+PFST ARAASTSLGSAAR CSNSATLAKM+VS +RS SP
Sbjct: 389 *ERQSLIRLGASGVPFSTDARAASTSLGSAARMFCSNSATLAKMEVSRARSPSP 228
Score = 155 bits (332), Expect(2) = 1e-038
Identities = 71/90 (78%), Positives = 75/90 (83%)
Frame = -1 / -2
Query: 571 SAERQGLAVPLLEALEQRVDVLALVDGHEHLVQLLAGRPRLLAGQVLGADLLAHEPVQRV 392
SAE QG AVPL EAL+QRVDVLALV GH+HLVQLL GRP LLAGQVLGA LA E V+ V
Sbjct: 567 SAEWQGRAVPLFEALQQRVDVLALVHGHQHLVQLLPGRPCLLAGQVLGAAHLADELVEWV 388
Query: 391 GPALLDPVGDQRAAVLHGRARGFHLLGQRR 302
G A+LDPVG QR AVLHGRARG HLLGQRR
Sbjct: 387 GAAVLDPVGSQRRAVLHGRARGLHLLGQRR 298
Score = 104 bits (222), Expect(2) = 1e-022
Identities = 48/72 (66%), Positives = 50/72 (69%)
Frame = +1 / +3
Query: 358 SGPQQDQGXXXXXXXXXXXXGGRHRVPDRREDEVARRGAEQGARGHQPAQAHRPAARVPQ 537
+G Q DQG G RHRVPDRRED VAR GAEQGA GH+ AQAHRPAA VPQ
Sbjct: 354 AGSQPDQGLPLLPTLPVRPRGVRHRVPDRREDTVARGGAEQGAGGHERAQAHRPAAGVPQ 533
Query: 538 GVERRAPAALLS 573
VERRAPA LLS
Sbjct: 534 RVERRAPATLLS 569
Score = 40.9 bits (83), Expect(5) = 3e-081
Identities = 17/19 (89%), Positives = 17/19 (89%)
Frame = +1 / +1
Query: 172 PNYALMQKXRAVLVEHALA 228
PNY LMQK RAVLVEHALA
Sbjct: 169 PNYPLMQKLRAVLVEHALA 225
Score = 37.7 bits (76), Expect(5) = 1e-068
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = -2 / -2
Query: 228 GQRVLDQHRAXFLHQRVV 175
GQRVLDQHR LHQRVV
Sbjct: 225 GQRVLDQHRPQLLHQRVV 172
Score = 34.5 bits (69), Expect(5) = 3e-081
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +3 / +1
Query: 135 EAVFXYADDPCSP 173
EAVF YADDPCSP
Sbjct: 133 EAVFAYADDPCSP 171
Score = 32.7 bits (65), Expect(5) = 1e-068
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = -1 / -3
Query: 169 LHGSSAYXNTASRS 128
LHGSSAY NTASRS
Sbjct: 167 LHGSSAYANTASRS 126
Score = 32.2 bits (64), Expect(5) = 3e-081
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = +2 / +1
Query: 83 LHNARFCEKDLQTAI 127
LH ARFCEKDL TAI
Sbjct: 82 LHIARFCEKDLLTAI 126
Score = 31.3 bits (62), Expect(5) = 1e-068
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = -2 / -3
Query: 126 IAVCRSFSQKRALW 85
IAV RSFSQKRA+W
Sbjct: 125 IAVSRSFSQKRAMW 84
Score = 28.1 bits (55), Expect(5) = 1e-068
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = -1 / -1
Query: 79 PLAFRLRDFLATCVT 35
P+ F LR FLATC+T
Sbjct: 76 PMLFMLRVFLATCIT 32
Score = 27.2 bits (53), Expect(2) = 1e-038
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -3 / -3
Query: 71 VQAQGLLGHLRH 36
V AQGLLGHL H
Sbjct: 68 VHAQGLLGHLHH 33
Score = 26.3 bits (51), Expect(5) = 3e-081
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +2 / +2
Query: 38 DAGGQEVPEPERQG 79
DAGGQE PE E+ G
Sbjct: 35 DAGGQEDPEHEQHG 76
Score = 23.5 bits (45), Expect(2) = 1e-022
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +1 / +1
Query: 43 RWPRSP*A*T 72
RWPR P*A*T
Sbjct: 40 RWPRRP*A*T 69
>gb|BG310118.1|BG310118 HVSMEc0016N14f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0016N14f, mRNA sequence
Length = 809
Score = 244 bits (527), Expect(4) = 2e-079
Identities = 99/115 (86%), Positives = 108/115 (93%)
Frame = +2 / +1
Query: 230 NGDAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRF 409
NGD ER ++TSIFAKVAEFEQ +RAALPKEVEAARA+VENG+PL PNRIK+CRSYPLY+F
Sbjct: 175 NGDGERALETSIFAKVAEFEQNIRAALPKEVEAARASVENGTPLAPNRIKDCRSYPLYQF 354
Query: 410 VREEVGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLPLC*A 574
VRE GTEYLTGEKTRSPGEELNKVLVA+N+RKHIDPLLECLKEWNG PLPLC*A
Sbjct: 355 VREVCGTEYLTGEKTRSPGEELNKVLVAMNERKHIDPLLECLKEWNGAPLPLC*A 519
Score = 208 bits (448), Expect(4) = 7e-067
Identities = 97/142 (68%), Positives = 105/142 (73%)
Frame = -2 / -1
Query: 657 FTTTLKRSVLCCYTFVFLLYTLSFSAGAAQQSGRGSPFHSLRHSSSGSMCLRWLMATSTL 478
FT C +F + AQQSGRG+PFHSLRHSSSGSMCLR MATSTL
Sbjct: 602 FTVLNSSIFTLCARVLFSFFWSYLLLSTAQQSGRGAPFHSLRHSSSGSMCLRSFMATSTL 423
Query: 477 FSSSPGDLVFSPVRYSVPTSSRTNRYSG*DRHSLILLGTRGLPFSTAARAASTSLGSAAR 298
FSSSPGD VFSPVRYSVP +SRTN SG*+R SLI LG G+PFST ARAASTSLGSAAR
Sbjct: 422 FSSSPGDRVFSPVRYSVPHTSRTNW*SG*ERQSLIRLGASGVPFSTDARAASTSLGSAAR 243
Query: 297 TCCSNSATLAKMDVSTSRSASP 232
CSNSATLAKM+VS +RS SP
Sbjct: 242 MFCSNSATLAKMEVSRARSPSP 177
Score = 155 bits (332), Expect(2) = 4e-037
Identities = 71/90 (78%), Positives = 75/90 (83%)
Frame = -1 / -3
Query: 571 SAERQGLAVPLLEALEQRVDVLALVDGHEHLVQLLAGRPRLLAGQVLGADLLAHEPVQRV 392
SAE QG AVPL EAL+QRVDVLALV GH+HLVQLL GRP LLAGQVLGA LA E V+ V
Sbjct: 516 SAEWQGRAVPLFEALQQRVDVLALVHGHQHLVQLLPGRPCLLAGQVLGAAHLADELVEWV 337
Query: 391 GPALLDPVGDQRAAVLHGRARGFHLLGQRR 302
G A+LDPVG QR AVLHGRARG HLLGQRR
Sbjct: 336 GAAVLDPVGSQRRAVLHGRARGLHLLGQRR 247
Score = 104 bits (222), Expect = 6e-022
Identities = 48/72 (66%), Positives = 50/72 (69%)
Frame = +1 / +3
Query: 358 SGPQQDQGXXXXXXXXXXXXGGRHRVPDRREDEVARRGAEQGARGHQPAQAHRPAARVPQ 537
+G Q DQG G RHRVPDRRED VAR GAEQGA GH+ AQAHRPAA VPQ
Sbjct: 303 AGSQPDQGLPLLPTLPVRPRGVRHRVPDRREDTVARGGAEQGAGGHERAQAHRPAAGVPQ 482
Query: 538 GVERRAPAALLS 573
VERRAPA LLS
Sbjct: 483 RVERRAPATLLS 518
Score = 40.9 bits (83), Expect(4) = 2e-079
Identities = 17/19 (89%), Positives = 17/19 (89%)
Frame = +1 / +1
Query: 172 PNYALMQKXRAVLVEHALA 228
PNY LMQK RAVLVEHALA
Sbjct: 118 PNYPLMQKLRAVLVEHALA 174
Score = 37.7 bits (76), Expect(4) = 7e-067
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = -2 / -3
Query: 228 GQRVLDQHRAXFLHQRVV 175
GQRVLDQHR LHQRVV
Sbjct: 174 GQRVLDQHRPQLLHQRVV 121
Score = 34.5 bits (69), Expect(4) = 2e-079
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +3 / +1
Query: 135 EAVFXYADDPCSP 173
EAVF YADDPCSP
Sbjct: 82 EAVFAYADDPCSP 120
Score = 34.1 bits (68), Expect(4) = 2e-079
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = +2 / +1
Query: 77 GRLHNARFCEKDLQTAI 127
G LH ARFCEKDL TAI
Sbjct: 25 GGLHIARFCEKDLLTAI 75
Score = 33.1 bits (66), Expect(4) = 7e-067
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -2 / -1
Query: 126 IAVCRSFSQKRALWSRP 76
IAV RSFSQKRA+W P
Sbjct: 74 IAVSRSFSQKRAMWRPP 24
Score = 32.7 bits (65), Expect(4) = 7e-067
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = -1 / -1
Query: 169 LHGSSAYXNTASRS 128
LHGSSAY NTASRS
Sbjct: 116 LHGSSAYANTASRS 75
Score = 22.6 bits (43), Expect(2) = 4e-037
Identities = 14/41 (34%), Positives = 16/41 (39%)
Frame = -3 / -3
Query: 176 LGAAXXXXXRKHRLAVXXXXXXXXXXXXXXXXXXGVQAQGL 54
+GAA R+HRLAV V AQGL
Sbjct: 123 VGAARVVRVREHRLAVDRGQQILLAEAGDVEAAHVVHAQGL 1
>gb|BQ768383.1|BQ768383 EBro08_SQ011_F13_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ011_F13 5', mRNA sequence
Length = 513
Score = 244 bits (527), Expect(4) = 4e-077
Identities = 99/115 (86%), Positives = 108/115 (93%)
Frame = +2 / +3
Query: 230 NGDAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRF 409
NGD ER ++TSIFAKVAEFEQ +RAALPKEVEAARA+VENG+PL PNRIK+CRSYPLY+F
Sbjct: 135 NGDGERALETSIFAKVAEFEQNIRAALPKEVEAARASVENGTPLAPNRIKDCRSYPLYQF 314
Query: 410 VREEVGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLPLC*A 574
VRE GTEYLTGEKTRSPGEELNKVLVA+N+RKHIDPLLECLKEWNG PLPLC*A
Sbjct: 315 VREVCGTEYLTGEKTRSPGEELNKVLVAMNERKHIDPLLECLKEWNGAPLPLC*A 479
Score = 205 bits (443), Expect(4) = 2e-063
Identities = 93/114 (81%), Positives = 99/114 (86%)
Frame = -2 / -3
Query: 573 AQQSGRGSPFHSLRHSSSGSMCLRWLMATSTLFSSSPGDLVFSPVRYSVPTSSRTNRYSG 394
AQQSGRG+PFHSLRHSSSGSMCLR MATSTLFSSSPGD VFSPVRYSVP +SRTN SG
Sbjct: 478 AQQSGRGAPFHSLRHSSSGSMCLRSFMATSTLFSSSPGDRVFSPVRYSVPHTSRTNW*SG 299
Query: 393 *DRHSLILLGTRGLPFSTAARAASTSLGSAARTCCSNSATLAKMDVSTSRSASP 232
*+R SLI LG G+PFST ARAASTSLGSAAR CSNSATLAKM+VS +RS SP
Sbjct: 298 *ERQSLIRLGASGVPFSTDARAASTSLGSAARMFCSNSATLAKMEVSRARSPSP 137
Score = 155 bits (332), Expect = 4e-037
Identities = 71/90 (78%), Positives = 75/90 (83%)
Frame = -1 / -2
Query: 571 SAERQGLAVPLLEALEQRVDVLALVDGHEHLVQLLAGRPRLLAGQVLGADLLAHEPVQRV 392
SAE QG AVPL EAL+QRVDVLALV GH+HLVQLL GRP LLAGQVLGA LA E V+ V
Sbjct: 476 SAEWQGRAVPLFEALQQRVDVLALVHGHQHLVQLLPGRPCLLAGQVLGAAHLADELVEWV 297
Query: 391 GPALLDPVGDQRAAVLHGRARGFHLLGQRR 302
G A+LDPVG QR AVLHGRARG HLLGQRR
Sbjct: 296 GAAVLDPVGSQRRAVLHGRARGLHLLGQRR 207
Score = 104 bits (222), Expect = 6e-022
Identities = 48/72 (66%), Positives = 50/72 (69%)
Frame = +1 / +2
Query: 358 SGPQQDQGXXXXXXXXXXXXGGRHRVPDRREDEVARRGAEQGARGHQPAQAHRPAARVPQ 537
+G Q DQG G RHRVPDRRED VAR GAEQGA GH+ AQAHRPAA VPQ
Sbjct: 263 AGSQPDQGLPLLPTLPVRPRGVRHRVPDRREDTVARGGAEQGAGGHERAQAHRPAAGVPQ 442
Query: 538 GVERRAPAALLS 573
VERRAPA LLS
Sbjct: 443 RVERRAPATLLS 478
Score = 40.9 bits (83), Expect(4) = 4e-077
Identities = 17/19 (89%), Positives = 17/19 (89%)
Frame = +1 / +3
Query: 172 PNYALMQKXRAVLVEHALA 228
PNY LMQK RAVLVEHALA
Sbjct: 78 PNYPLMQKLRAVLVEHALA 134
Score = 37.7 bits (76), Expect(4) = 2e-063
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = -2 / -2
Query: 228 GQRVLDQHRAXFLHQRVV 175
GQRVLDQHR LHQRVV
Sbjct: 134 GQRVLDQHRPQLLHQRVV 81
Score = 34.5 bits (69), Expect(4) = 4e-077
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +3 / +3
Query: 135 EAVFXYADDPCSP 173
EAVF YADDPCSP
Sbjct: 42 EAVFAYADDPCSP 80
Score = 32.7 bits (65), Expect(4) = 2e-063
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = -1 / -3
Query: 169 LHGSSAYXNTASRS 128
LHGSSAY NTASRS
Sbjct: 76 LHGSSAYANTASRS 35
Score = 26.3 bits (51), Expect(4) = 4e-077
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +2 / +3
Query: 95 RFCEKDLQTAI 127
RFCEKDL TAI
Sbjct: 3 RFCEKDLLTAI 35
Score = 23.5 bits (45), Expect(4) = 2e-063
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = -2 / -3
Query: 126 IAVCRSFSQKR 94
IAV RSFSQKR
Sbjct: 34 IAVSRSFSQKR 2
>gb|BI778700.2|BI778700 EBro01_SQ001_C06_R root, 3 week, hydroponic grown, no treatment, cv
Optic, EBro01 Hordeum vulgare subsp. vulgare cDNA clone
EBro01_SQ001_C06 5', mRNA sequence
Length = 586
Score = 225 bits (486), Expect(5) = 6e-077
Identities = 91/106 (85%), Positives = 100/106 (94%)
Frame = +2 / +2
Query: 230 NGDAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRF 409
NGD ER ++TSIFAKVAEFEQ +RAALPKEVEAARA+VENG+PL PNRIK+CRSYPLY+F
Sbjct: 269 NGDGERALETSIFAKVAEFEQNIRAALPKEVEAARASVENGTPLAPNRIKDCRSYPLYQF 448
Query: 410 VREEVGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWN 547
VRE GTEYLTGEKTRSPGEELNKVLVA+N+RKHIDPLLECLKEWN
Sbjct: 449 VREVCGTEYLTGEKTRSPGEELNKVLVAMNERKHIDPLLECLKEWN 586
Score = 186 bits (400), Expect(5) = 2e-064
Identities = 85/105 (80%), Positives = 90/105 (85%)
Frame = -2 / -2
Query: 546 FHSLRHSSSGSMCLRWLMATSTLFSSSPGDLVFSPVRYSVPTSSRTNRYSG*DRHSLILL 367
FHSLRHSSSGSMCLR MATSTLFSSSPGD VFSPVRYSVP +SRTN SG*+R SLI L
Sbjct: 585 FHSLRHSSSGSMCLRSFMATSTLFSSSPGDRVFSPVRYSVPHTSRTNW*SG*ERQSLIRL 406
Query: 366 GTRGLPFSTAARAASTSLGSAARTCCSNSATLAKMDVSTSRSASP 232
G G+PFST ARAASTSLGSAAR CSNSATLAKM+VS +RS SP
Sbjct: 405 GASGVPFSTDARAASTSLGSAARMFCSNSATLAKMEVSRARSPSP 271
Score = 144 bits (309), Expect(2) = 3e-038
Identities = 65/82 (79%), Positives = 69/82 (84%)
Frame = -1 / -1
Query: 547 VPLLEALEQRVDVLALVDGHEHLVQLLAGRPRLLAGQVLGADLLAHEPVQRVGPALLDPV 368
VPL EAL+QRVDVLALV GH+HLVQLL GRP LLAGQVLGA LA E V+ VG A+LDPV
Sbjct: 586 VPLFEALQQRVDVLALVHGHQHLVQLLPGRPCLLAGQVLGAAHLADELVEWVGAAVLDPV 407
Query: 367 GDQRAAVLHGRARGFHLLGQRR 302
G QR AVLHGRARG HLLGQRR
Sbjct: 406 GSQRRAVLHGRARGLHLLGQRR 341
Score = 40.9 bits (83), Expect(5) = 6e-077
Identities = 17/19 (89%), Positives = 17/19 (89%)
Frame = +1 / +2
Query: 172 PNYALMQKXRAVLVEHALA 228
PNY LMQK RAVLVEHALA
Sbjct: 212 PNYPLMQKLRAVLVEHALA 268
Score = 37.7 bits (76), Expect(5) = 2e-064
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = -2 / -1
Query: 228 GQRVLDQHRAXFLHQRVV 175
GQRVLDQHR LHQRVV
Sbjct: 268 GQRVLDQHRPQLLHQRVV 215
Score = 36.3 bits (73), Expect(2) = 3e-038
Identities = 19/47 (40%), Positives = 21/47 (44%)
Frame = -3 / -1
Query: 176 LGAAXXXXXRKHRLAVXXXXXXXXXXXXXXXXXXGVQAQGLLGHLRH 36
+GAA R+HRLAV V AQGLLGHL H
Sbjct: 217 VGAARVVRVREHRLAVDRGQQILLAEAGDVEAAHVVHAQGLLGHLHH 77
Score = 34.5 bits (69), Expect(5) = 6e-077
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +3 / +2
Query: 135 EAVFXYADDPCSP 173
EAVF YADDPCSP
Sbjct: 176 EAVFAYADDPCSP 214
Score = 34.1 bits (68), Expect(5) = 6e-077
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = +2 / +2
Query: 77 GRLHNARFCEKDLQTAI 127
G LH ARFCEKDL TAI
Sbjct: 119 GGLHIARFCEKDLLTAI 169
Score = 33.1 bits (66), Expect(5) = 2e-064
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -2 / -2
Query: 126 IAVCRSFSQKRALWSRP 76
IAV RSFSQKRA+W P
Sbjct: 168 IAVSRSFSQKRAMWRPP 118
Score = 32.7 bits (65), Expect(5) = 2e-064
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = -1 / -2
Query: 169 LHGSSAYXNTASRS 128
LHGSSAY NTASRS
Sbjct: 210 LHGSSAYANTASRS 169
Score = 31.3 bits (62), Expect(5) = 2e-064
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = -1 / -2
Query: 82 PPLAFRLRDFLATCVT 35
PP+ F LR FLATC+T
Sbjct: 123 PPMLFMLRVFLATCIT 76
Score = 28.6 bits (56), Expect(5) = 6e-077
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = +2 / +1
Query: 38 DAGGQEVPEPERQGR 82
DAGGQE PE E+ GR
Sbjct: 79 DAGGQEDPEHEQHGR 123
>gb|BJ467713.1|BJ467713 BJ467713 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags29i14 3', mRNA sequence
Length = 595
Score = 219 bits (472), Expect(6) = 6e-077
Identities = 90/109 (82%), Positives = 99/109 (90%)
Frame = +2 / -3
Query: 230 NGDAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRF 409
NGD ER ++TSIFAKVAEFEQ +RAALPKEVEAARA+VENG+PL PNRIK+CRSYPLY+F
Sbjct: 359 NGDGERALETSIFAKVAEFEQNIRAALPKEVEAARASVENGTPLAPNRIKDCRSYPLYQF 180
Query: 410 VREEVGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEP 556
VRE GTEYLTGEKTRSPGEELNKVLVA+N+RKHIDPLLECLKE P
Sbjct: 179 VREVCGTEYLTGEKTRSPGEELNKVLVAMNERKHIDPLLECLKE*TARP 33
Score = 185 bits (398), Expect(6) = 6e-065
Identities = 85/109 (77%), Positives = 91/109 (83%)
Frame = -2 / +1
Query: 558 RGSPFHSLRHSSSGSMCLRWLMATSTLFSSSPGDLVFSPVRYSVPTSSRTNRYSG*DRHS 379
+G HSLRHSSSGSMCLR MATSTLFSSSPGD VFSPVRYSVP +SRTN SG*+R S
Sbjct: 31 QGRAVHSLRHSSSGSMCLRSFMATSTLFSSSPGDRVFSPVRYSVPHTSRTNW*SG*ERQS 210
Query: 378 LILLGTRGLPFSTAARAASTSLGSAARTCCSNSATLAKMDVSTSRSASP 232
LI LG G+PFST ARAASTSLGSAAR CSNSATLAKM+VS +RS SP
Sbjct: 211 LIRLGASGVPFSTDARAASTSLGSAARMFCSNSATLAKMEVSRARSPSP 357
Score = 139 bits (298), Expect(2) = 1e-036
Identities = 63/80 (78%), Positives = 67/80 (83%)
Frame = -1 / +3
Query: 541 LLEALEQRVDVLALVDGHEHLVQLLAGRPRLLAGQVLGADLLAHEPVQRVGPALLDPVGD 362
L EAL+QRVDVLALV GH+HLVQLL GRP LLAGQVLGA LA E V+ VG A+LDPVG
Sbjct: 48 LFEALQQRVDVLALVHGHQHLVQLLPGRPCLLAGQVLGAAHLADELVEWVGAAVLDPVGS 227
Query: 361 QRAAVLHGRARGFHLLGQRR 302
QR AVLHGRARG HLLGQRR
Sbjct: 228 QRRAVLHGRARGLHLLGQRR 287
Score = 40.9 bits (83), Expect(6) = 6e-077
Identities = 17/19 (89%), Positives = 17/19 (89%)
Frame = +1 / -3
Query: 172 PNYALMQKXRAVLVEHALA 228
PNY LMQK RAVLVEHALA
Sbjct: 416 PNYPLMQKLRAVLVEHALA 360
Score = 37.7 bits (76), Expect(6) = 6e-065
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = -2 / +3
Query: 228 GQRVLDQHRAXFLHQRVV 175
GQRVLDQHR LHQRVV
Sbjct: 360 GQRVLDQHRPQLLHQRVV 413
Score = 36.3 bits (73), Expect(2) = 1e-036
Identities = 19/47 (40%), Positives = 21/47 (44%)
Frame = -3 / +3
Query: 176 LGAAXXXXXRKHRLAVXXXXXXXXXXXXXXXXXXGVQAQGLLGHLRH 36
+GAA R+HRLAV V AQGLLGHL H
Sbjct: 411 VGAARVVRVREHRLAVDRGQQILLAEAGDVEAAHVVHAQGLLGHLHH 551
Score = 34.5 bits (69), Expect(6) = 6e-077
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +3 / -3
Query: 135 EAVFXYADDPCSP 173
EAVF YADDPCSP
Sbjct: 452 EAVFAYADDPCSP 414
Score = 34.1 bits (68), Expect(6) = 6e-077
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = +2 / -3
Query: 77 GRLHNARFCEKDLQTAI 127
G LH ARFCEKDL TAI
Sbjct: 509 GGLHIARFCEKDLLTAI 459
Score = 33.1 bits (66), Expect(6) = 6e-065
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -2 / +1
Query: 126 IAVCRSFSQKRALWSRP 76
IAV RSFSQKRA+W P
Sbjct: 460 IAVSRSFSQKRAMWRPP 510
Score = 32.7 bits (65), Expect(6) = 6e-065
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = -1 / +1
Query: 169 LHGSSAYXNTASRS 128
LHGSSAY NTASRS
Sbjct: 418 LHGSSAYANTASRS 459
Score = 31.3 bits (62), Expect(6) = 6e-065
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = -1 / +1
Query: 82 PPLAFRLRDFLATCVT 35
PP+ F LR FLATC+T
Sbjct: 505 PPMLFMLRVFLATCIT 552
Score = 28.6 bits (56), Expect(6) = 6e-077
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = +2 / -2
Query: 38 DAGGQEVPEPERQGR 82
DAGGQE PE E+ GR
Sbjct: 549 DAGGQEDPEHEQHGR 505
Score = 24.0 bits (46), Expect(6) = 6e-077
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +2 / -2
Query: 545 NGEPLPLC*AAPAE 586
NG PLPLC* + E
Sbjct: 45 NGAPLPLC*QSTRE 4
Score = 21.7 bits (41), Expect(6) = 6e-065
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -3 / +3
Query: 584 LLVQLSRAAGARRS 543
LL SR AGARRS
Sbjct: 6 LLSTASRVAGARRS 47
>gb|BQ768801.1|BQ768801 EBro08_SQ012_P15_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ012_P15 5', mRNA sequence
Length = 679
Score = 222 bits (479), Expect(4) = 2e-070
Identities = 89/114 (78%), Positives = 103/114 (90%)
Frame = +2 / +1
Query: 230 NGDAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRF 409
NG+AE DV+TS+FAK+A FEQ++RA LPKEVEAAR+AVENG+ NRI ECRSYPLYRF
Sbjct: 328 NGEAEHDVETSVFAKLATFEQELRAVLPKEVEAARSAVENGTAAQQNRISECRSYPLYRF 507
Query: 410 VREEVGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLPLC* 571
VR+E+GTEYLTGEKTRSPGEE++KV VA+NQ KHID LLECLKEWNGEPLP+C*
Sbjct: 508 VRKELGTEYLTGEKTRSPGEEVDKVFVAMNQGKHIDALLECLKEWNGEPLPIC* 669
Score = 176 bits (379), Expect(2) = 5e-047
Identities = 79/118 (66%), Positives = 88/118 (74%)
Frame = -2 / -3
Query: 576 AAQQSGRGSPFHSLRHSSSGSMCLRWLMATSTLFSSSPGDLVFSPVRYSVPTSSRTNRYS 397
+ QQ GRGSPFHS RHS S SMCL W MAT+TL +SSPGD VFSPV+YSVP+S RTNR S
Sbjct: 674 SVQQIGRGSPFHSFRHSRSASMCLPWFMATNTLSTSSPGDRVFSPVKYSVPSSLRTNR*S 495
Query: 396 G*DRHSLILLGTRGLPFSTAARAASTSLGSAARTCCSNSATLAKMDVSTSRSASPFGQ 223
G DRHS I +PFSTA AASTS GS AR+ CSN A+LA DVSTS SASP +
Sbjct: 494 GYDRHSEIRFCCAAVPFSTALLAASTSFGSTARSSCSNVASLANTDVSTSCSASPLAK 321
Score = 112 bits (240), Expect(2) = 1e-024
Identities = 53/88 (60%), Positives = 63/88 (71%)
Frame = -1 / -2
Query: 571 SAERQGLAVPLLEALEQRVDVLALVDGHEHLVQLLAGRPRLLAGQVLGADLLAHEPVQRV 392
SA+RQGL +PLL+AL++RVDVLALV G+EHLV L RPRLL QVL + LLAHEPV+RV
Sbjct: 669 SADRQGLTIPLLQALKERVDVLALVHGNEHLVHLFPRRPRLLPSQVLRSKLLAHEPVERV 490
Query: 391 GPALLDPVGDQRAAVLHGRARGFHLLGQ 308
P D V +A+LHG G LL Q
Sbjct: 489 RPTFGDTVLLCCSAILHGAPGGLDLLWQ 406
Score = 37.7 bits (76), Expect(4) = 2e-070
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = +1 / +1
Query: 175 NYALMQKXRAVLVEHALA 228
NY LMQK RAVLVEHALA
Sbjct: 274 NYPLMQKMRAVLVEHALA 327
Score = 32.2 bits (64), Expect(4) = 2e-070
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +2 / +1
Query: 77 GRLHNARFCEKDLQTAI 127
G LH+ARFCEKDL I
Sbjct: 178 GHLHSARFCEKDLLLTI 228
Score = 31.8 bits (63), Expect(2) = 5e-047
Identities = 20/45 (44%), Positives = 23/45 (51%)
Frame = -1 / -3
Query: 169 LHGSSAYXNTASRSDRRLQVLLAEARVVEPPLAFRLRDFLATCVT 35
L GSSA NTASRS R + + + PL L FLAT T
Sbjct: 269 LQGSSA*ANTASRSIVRRRSFSQKRALCRWPLLLVLSVFLATVFT 135
Score = 31.3 bits (62), Expect(4) = 2e-070
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = +3 / +1
Query: 135 EAVFXYADDPCS 170
EAVF YADDPCS
Sbjct: 235 EAVFAYADDPCS 270
Score = 22.6 bits (43), Expect(2) = 1e-024
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = -2 / -3
Query: 114 RSFSQKRALWSRP 76
RSFSQKRAL P
Sbjct: 215 RSFSQKRALCRWP 177
>emb|Z49145.1|HVPAL2MR H.vulgare partial PAL mRNA for phenylalanine ammonia-lyase (1670 bp)
Length = 1670
Score = 221 bits (476), Expect(4) = 4e-070
Identities = 89/121 (73%), Positives = 104/121 (85%)
Frame = +2 / +3
Query: 230 NGDAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRF 409
NG+AE DV+TS+FAK+A FEQ++RA LP EVEAAR+AVENG+ NRI ECRSYPLYRF
Sbjct: 1089 NGEAEHDVETSVFAKLATFEQELRAVLPTEVEAARSAVENGTAAQQNRISECRSYPLYRF 1268
Query: 410 VREEVGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLPLC*AAPAEK 589
VR+E+GTEYLTGEKTRSPGEE++KV VA+NQ KHID LLECLKEWNGEPLP+C* E
Sbjct: 1269 VRKELGTEYLTGEKTRSPGEEVDKVFVAMNQGKHIDALLECLKEWNGEPLPIC*TEDPEM 1448
Query: 590 D 592
+
Sbjct: 1449 E 1451
Score = 182 bits (392), Expect(3) = 5e-051
Identities = 81/123 (65%), Positives = 92/123 (74%)
Frame = -2 / -2
Query: 591 SFSAGAAQQSGRGSPFHSLRHSSSGSMCLRWLMATSTLFSSSPGDLVFSPVRYSVPTSSR 412
S S + QQ GRGSPFHS RHS S SMCL W MAT+TL +SSPGD VFSPV+YSVP+S R
Sbjct: 1450 SISGSSVQQIGRGSPFHSFRHSRSASMCLPWFMATNTLSTSSPGDRVFSPVKYSVPSSLR 1271
Query: 411 TNRYSG*DRHSLILLGTRGLPFSTAARAASTSLGSAARTCCSNSATLAKMDVSTSRSASP 232
TNR SG DRHS I +PFSTA RAASTS+G+ AR+ CSN A+LA DVSTS SASP
Sbjct: 1270 TNR*SGYDRHSEIRFCCAAVPFSTALRAASTSVGNTARSSCSNVASLANTDVSTSCSASP 1091
Query: 231 FGQ 223
+
Sbjct: 1090 LAK 1082
Score = 110 bits (234), Expect = 1e-023
Identities = 52/88 (59%), Positives = 62/88 (70%)
Frame = -1 / -1
Query: 571 SAERQGLAVPLLEALEQRVDVLALVDGHEHLVQLLAGRPRLLAGQVLGADLLAHEPVQRV 392
SA+RQGL +PLL+AL++RVDVLALV G+EHLV L RPRLL QVL + LLAHEPV+RV
Sbjct: 1430 SADRQGLTIPLLQALKERVDVLALVHGNEHLVHLFPRRPRLLPSQVLRSKLLAHEPVERV 1251
Query: 391 GPALLDPVGDQRAAVLHGRARGFHLLGQ 308
P D V +A+LHG G L Q
Sbjct: 1250 RPTFGDTVLLCCSAILHGAPGGLDLRWQ 1167
Score = 37.7 bits (76), Expect(4) = 4e-070
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = +1 / +3
Query: 175 NYALMQKXRAVLVEHALA 228
NY LMQK RAVLVEHALA
Sbjct: 1035 NYPLMQKMRAVLVEHALA 1088
Score = 32.7 bits (65), Expect(4) = 4e-070
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = +2 / +3
Query: 68 ERQGRLHNARFCEKDLQTAI 127
+ G LH ARFCEKDL I
Sbjct: 930 DNNGHLHKARFCEKDLLLTI 989
Score = 31.3 bits (62), Expect(4) = 4e-070
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = +3 / +3
Query: 135 EAVFXYADDPCS 170
EAVF YADDPCS
Sbjct: 996 EAVFAYADDPCS 1031
Score = 29.0 bits (57), Expect(3) = 5e-051
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = -1 / -2
Query: 169 LHGSSAYXNTASRS 128
L GSSAY NTASRS
Sbjct: 1030 LQGSSAYANTASRS 989
Score = 28.6 bits (56), Expect(3) = 5e-051
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = -2 / -2
Query: 114 RSFSQKRALWSRP 76
RSFSQKRALW P
Sbjct: 976 RSFSQKRALWRWP 938
>gb|AV918830.1|AV918830 AV918830 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags22g18 3', mRNA sequence
Length = 605
Score = 244 bits (527), Expect(2) = 4e-070
Identities = 99/115 (86%), Positives = 108/115 (93%)
Frame = +2 / -1
Query: 230 NGDAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRF 409
NGD ER ++TSIFAKVAEFEQ +RAALPKEVEAARA+VENG+PL PNRIK+CRSYPLY+F
Sbjct: 542 NGDGERALETSIFAKVAEFEQNIRAALPKEVEAARASVENGTPLAPNRIKDCRSYPLYQF 363
Query: 410 VREEVGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLPLC*A 574
VRE GTEYLTGEKTRSPGEELNKVLVA+N+RKHIDPLLECLKEWNG PLPLC*A
Sbjct: 362 VREVCGTEYLTGEKTRSPGEELNKVLVAMNERKHIDPLLECLKEWNGAPLPLC*A 198
Score = 207 bits (447), Expect(3) = 2e-059
Identities = 97/142 (68%), Positives = 104/142 (73%)
Frame = -2 / +1
Query: 657 FTTTLKRSVLCCYTFVFLLYTLSFSAGAAQQSGRGSPFHSLRHSSSGSMCLRWLMATSTL 478
FT C F + AQQSGRG+PFHSLRHSSSGSMCLR MATSTL
Sbjct: 115 FTVLNSSIFTLCVRVFFSFFWSYLLLSTAQQSGRGAPFHSLRHSSSGSMCLRSFMATSTL 294
Query: 477 FSSSPGDLVFSPVRYSVPTSSRTNRYSG*DRHSLILLGTRGLPFSTAARAASTSLGSAAR 298
FSSSPGD VFSPVRYSVP +SRTN SG*+R SLI LG G+PFST ARAASTSLGSAAR
Sbjct: 295 FSSSPGDRVFSPVRYSVPHTSRTNW*SG*ERQSLIRLGASGVPFSTDARAASTSLGSAAR 474
Query: 297 TCCSNSATLAKMDVSTSRSASP 232
CSNSATLAKM+VS +RS SP
Sbjct: 475 MFCSNSATLAKMEVSRARSPSP 540
Score = 155 bits (332), Expect = 4e-037
Identities = 71/90 (78%), Positives = 75/90 (83%)
Frame = -1 / +3
Query: 571 SAERQGLAVPLLEALEQRVDVLALVDGHEHLVQLLAGRPRLLAGQVLGADLLAHEPVQRV 392
SAE QG AVPL EAL+QRVDVLALV GH+HLVQLL GRP LLAGQVLGA LA E V+ V
Sbjct: 201 SAEWQGRAVPLFEALQQRVDVLALVHGHQHLVQLLPGRPCLLAGQVLGAAHLADELVEWV 380
Query: 391 GPALLDPVGDQRAAVLHGRARGFHLLGQRR 302
G A+LDPVG QR AVLHGRARG HLLGQRR
Sbjct: 381 GAAVLDPVGSQRRAVLHGRARGLHLLGQRR 470
Score = 104 bits (222), Expect = 6e-022
Identities = 48/72 (66%), Positives = 50/72 (69%)
Frame = +1 / -3
Query: 358 SGPQQDQGXXXXXXXXXXXXGGRHRVPDRREDEVARRGAEQGARGHQPAQAHRPAARVPQ 537
+G Q DQG G RHRVPDRRED VAR GAEQGA GH+ AQAHRPAA VPQ
Sbjct: 414 AGSQPDQGLPLLPTLPVRPRGVRHRVPDRREDTVARGGAEQGAGGHERAQAHRPAAGVPQ 235
Query: 538 GVERRAPAALLS 573
VERRAPA LLS
Sbjct: 234 RVERRAPATLLS 199
Score = 40.9 bits (83), Expect(2) = 4e-070
Identities = 17/19 (89%), Positives = 17/19 (89%)
Frame = +1 / -1
Query: 172 PNYALMQKXRAVLVEHALA 228
PNY LMQK RAVLVEHALA
Sbjct: 599 PNYPLMQKLRAVLVEHALA 543
Score = 37.7 bits (76), Expect(3) = 2e-059
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = -2 / +3
Query: 228 GQRVLDQHRAXFLHQRVV 175
GQRVLDQHR LHQRVV
Sbjct: 543 GQRVLDQHRPQLLHQRVV 596
Score = 23.1 bits (44), Expect(3) = 2e-059
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -3 / +2
Query: 764 HGVAAAGTQQHSHEL 720
HG+AAA QQ H+L
Sbjct: 32 HGMAAAEKQQQ*HQL 76
>gb|BI777236.2|BI777236 EBro03_SQ002_I15_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ002_I15 5', mRNA sequence
Length = 445
Score = 231 bits (498), Expect(3) = 6e-070
Identities = 93/109 (85%), Positives = 102/109 (93%)
Frame = +2 / +3
Query: 230 NGDAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRF 409
NGD ER ++TSIFAKVAEFEQ +RAALPKEVEAARA+VENG+PL PNRIK+CRSYPLY+F
Sbjct: 117 NGDGERALETSIFAKVAEFEQNIRAALPKEVEAARASVENGTPLAPNRIKDCRSYPLYQF 296
Query: 410 VREEVGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEP 556
VRE GTEYLTGEKTRSPGEELNKVLVA+N+RKHIDPLLECLKEWNG P
Sbjct: 297 VREVCGTEYLTGEKTRSPGEELNKVLVAMNERKHIDPLLECLKEWNGAP 443
Score = 194 bits (419), Expect(3) = 1e-057
Identities = 88/109 (80%), Positives = 94/109 (86%)
Frame = -2 / -1
Query: 558 RGSPFHSLRHSSSGSMCLRWLMATSTLFSSSPGDLVFSPVRYSVPTSSRTNRYSG*DRHS 379
RG+PFHSLRHSSSGSMCLR MATSTLFSSSPGD VFSPVRYSVP +SRTN SG*+R S
Sbjct: 445 RGAPFHSLRHSSSGSMCLRSFMATSTLFSSSPGDRVFSPVRYSVPHTSRTNW*SG*ERQS 266
Query: 378 LILLGTRGLPFSTAARAASTSLGSAARTCCSNSATLAKMDVSTSRSASP 232
LI LG G+PFST ARAASTSLGSAAR CSNSATLAKM+VS +RS SP
Sbjct: 265 LIRLGASGVPFSTDARAASTSLGSAARMFCSNSATLAKMEVSRARSPSP 119
Score = 148 bits (317), Expect = 5e-035
Identities = 67/85 (78%), Positives = 71/85 (83%)
Frame = -1 / -3
Query: 556 GLAVPLLEALEQRVDVLALVDGHEHLVQLLAGRPRLLAGQVLGADLLAHEPVQRVGPALL 377
G AVPL EAL+QRVDVLALV GH+HLVQLL GRP LLAGQVLGA LA E V+ VG A+L
Sbjct: 443 GRAVPLFEALQQRVDVLALVHGHQHLVQLLPGRPCLLAGQVLGAAHLADELVEWVGAAVL 264
Query: 376 DPVGDQRAAVLHGRARGFHLLGQRR 302
DPVG QR AVLHGRARG HLLGQRR
Sbjct: 263 DPVGSQRRAVLHGRARGLHLLGQRR 189
Score = 40.9 bits (83), Expect(3) = 6e-070
Identities = 17/19 (89%), Positives = 17/19 (89%)
Frame = +1 / +3
Query: 172 PNYALMQKXRAVLVEHALA 228
PNY LMQK RAVLVEHALA
Sbjct: 60 PNYPLMQKLRAVLVEHALA 116
Score = 37.7 bits (76), Expect(3) = 1e-057
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = -2 / -3
Query: 228 GQRVLDQHRAXFLHQRVV 175
GQRVLDQHR LHQRVV
Sbjct: 116 GQRVLDQHRPQLLHQRVV 63
Score = 31.8 bits (63), Expect(3) = 6e-070
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = +3 / +3
Query: 135 EAVFXYADDPCSP 173
EA F YADDPCSP
Sbjct: 24 EAPFAYADDPCSP 62
Score = 29.5 bits (58), Expect(3) = 1e-057
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = -1 / -1
Query: 169 LHGSSAYXNTASRS 128
LHGSSAY N ASRS
Sbjct: 58 LHGSSAYANGASRS 17
>gb|BF264601.3|BF264601 HV_CEa0009N21f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0009N21f, mRNA sequence
Length = 872
Score = 218 bits (471), Expect(4) = 2e-069
Identities = 88/116 (75%), Positives = 104/116 (89%)
Frame = +2 / +1
Query: 230 NGDAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRF 409
NG+AERDV+TS+FAK+A FEQ++RA LPKEVEAAR+AVENG+ NRI ECRSYPLYRF
Sbjct: 301 NGEAERDVETSVFAKLAVFEQELRAMLPKEVEAARSAVENGTATQQNRITECRSYPLYRF 480
Query: 410 VREEVGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLPLC*AA 577
VR+E+GTEYLTGEKTRSPGEE++KV VA+N+ KHID LLECLK WNGEPLP+C* +
Sbjct: 481 VRKELGTEYLTGEKTRSPGEEVDKVFVAMNKGKHIDALLECLKGWNGEPLPIC*GS 648
Score = 174 bits (374), Expect(2) = 2e-046
Identities = 78/115 (67%), Positives = 90/115 (78%)
Frame = -2 / -1
Query: 567 QSGRGSPFHSLRHSSSGSMCLRWLMATSTLFSSSPGDLVFSPVRYSVPTSSRTNRYSG*D 388
Q GRGSPF LRHSSS SMCL +AT+TL +SSPGDLVFSPV+YSVP+S RTNR SG D
Sbjct: 638 QIGRGSPFQPLRHSSSASMCLPLFIATNTLSTSSPGDLVFSPVKYSVPSSLRTNR*SGYD 459
Query: 387 RHSLILLGTRGLPFSTAARAASTSLGSAARTCCSNSATLAKMDVSTSRSASPFGQ 223
RHS+I +PFSTA RAASTS G+ AR+ CSN+A+LA DVSTSRSASP +
Sbjct: 458 RHSVIRFCCVAVPFSTALRAASTSFGNIARSSCSNTASLANTDVSTSRSASPLAK 294
Score = 37.7 bits (76), Expect(4) = 2e-069
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = +1 / +1
Query: 175 NYALMQKXRAVLVEHALA 228
NY LMQK RAVLVEHALA
Sbjct: 247 NYPLMQKMRAVLVEHALA 300
Score = 32.2 bits (64), Expect(4) = 2e-069
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +2 / +1
Query: 77 GRLHNARFCEKDLQTAI 127
G LH+ARFCEKDL I
Sbjct: 151 GHLHSARFCEKDLLLTI 201
Score = 31.8 bits (63), Expect(2) = 2e-046
Identities = 20/45 (44%), Positives = 23/45 (51%)
Frame = -1 / -1
Query: 169 LHGSSAYXNTASRSDRRLQVLLAEARVVEPPLAFRLRDFLATCVT 35
L GSSA NTASRS R + + + PL L FLAT T
Sbjct: 242 LQGSSA*ANTASRSIVRRRSFSQKRALCRWPLLLVLSVFLATVFT 108
Score = 31.3 bits (62), Expect(4) = 2e-069
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = +3 / +1
Query: 135 EAVFXYADDPCS 170
EAVF YADDPCS
Sbjct: 208 EAVFAYADDPCS 243
>gb|BQ765219.1|BQ765219 EBro03_SQ006_F15_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ006_F15 5', mRNA sequence
Length = 714
Score = 218 bits (471), Expect(4) = 2e-069
Identities = 88/116 (75%), Positives = 104/116 (89%)
Frame = +2 / +2
Query: 230 NGDAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRF 409
NG+AERDV+TS+FAK+A FEQ++RA LPKEVEAAR+AVENG+ NRI ECRSYPLYRF
Sbjct: 188 NGEAERDVETSVFAKLAMFEQELRAMLPKEVEAARSAVENGTATQQNRITECRSYPLYRF 367
Query: 410 VREEVGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLPLC*AA 577
VR+E+GTEYLTGEKTRSPGEE++KV VA+N+ KHID LLECLK WNGEPLP+C* +
Sbjct: 368 VRKELGTEYLTGEKTRSPGEEVDKVFVAMNKGKHIDALLECLKGWNGEPLPIC*GS 535
Score = 173 bits (372), Expect(2) = 1e-045
Identities = 78/115 (67%), Positives = 89/115 (77%)
Frame = -2 / -1
Query: 567 QSGRGSPFHSLRHSSSGSMCLRWLMATSTLFSSSPGDLVFSPVRYSVPTSSRTNRYSG*D 388
Q GRGSPF LRHSSS SMCL +AT+TL +SSPGDLVFSPV+YSVP+S RTNR SG D
Sbjct: 525 QIGRGSPFQPLRHSSSASMCLPLFIATNTLSTSSPGDLVFSPVKYSVPSSLRTNR*SGYD 346
Query: 387 RHSLILLGTRGLPFSTAARAASTSLGSAARTCCSNSATLAKMDVSTSRSASPFGQ 223
RHS+I +PFSTA RAASTS G+ AR+ CSN A+LA DVSTSRSASP +
Sbjct: 345 RHSVIRFCCVAVPFSTALRAASTSFGNIARSSCSNMASLANTDVSTSRSASPLAK 181
Score = 100 bits (213), Expect(2) = 5e-021
Identities = 52/96 (54%), Positives = 61/96 (63%)
Frame = -1 / -3
Query: 595 IVFLCWCSSAERQGLAVPLLEALEQRVDVLALVDGHEHLVQLLAGRPRLLAGQVLGADLL 416
I+ C S A+RQGL VP LE L+Q VDVLALV ++HLV AGRP LLAGQVL + LL
Sbjct: 553 IICSCS*SLADRQGLTVPTLETLKQCVDVLALVHSNKHLVHFFAGRPSLLAGQVLCSKLL 374
Query: 415 AHEPVQRVGPALLDPVGDQRAAVLHGRARGFHLLGQ 308
AH+PV+ V A D V + VLHG LL Q
Sbjct: 373 AHKPVEWV*SAFSDTVLLCGSTVLHGTPSSLDLLWQ 266
Score = 37.7 bits (76), Expect(4) = 2e-069
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = +1 / +2
Query: 175 NYALMQKXRAVLVEHALA 228
NY LMQK RAVLVEHALA
Sbjct: 134 NYPLMQKMRAVLVEHALA 187
Score = 32.2 bits (64), Expect(4) = 2e-069
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +2 / +2
Query: 77 GRLHNARFCEKDLQTAI 127
G LH+ARFCEKDL I
Sbjct: 38 GHLHSARFCEKDLLLTI 88
Score = 31.3 bits (62), Expect(4) = 2e-069
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = +3 / +2
Query: 135 EAVFXYADDPCS 170
EAVF YADDPCS
Sbjct: 95 EAVFAYADDPCS 130
Score = 30.4 bits (60), Expect(2) = 1e-045
Identities = 19/42 (45%), Positives = 22/42 (52%)
Frame = -1 / -1
Query: 169 LHGSSAYXNTASRSDRRLQVLLAEARVVEPPLAFRLRDFLAT 44
L GSSA NTASRS R + + + PL L FLAT
Sbjct: 129 LQGSSA*ANTASRSIVRRRSFSQKRALCRWPLLLVLSVFLAT 4
Score = 22.6 bits (43), Expect(2) = 5e-021
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = -2 / -1
Query: 114 RSFSQKRALWSRP 76
RSFSQKRAL P
Sbjct: 75 RSFSQKRALCRWP 37
>gb|BQ765192.1|BQ765192 EBro03_SQ006_A15_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ006_A15 5', mRNA sequence
Length = 617
Score = 218 bits (471), Expect(4) = 2e-069
Identities = 88/116 (75%), Positives = 104/116 (89%)
Frame = +2 / +1
Query: 230 NGDAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRF 409
NG+AERDV+TS+FAK+A FEQ++RA LPKEVEAAR+AVENG+ NRI ECRSYPLYRF
Sbjct: 172 NGEAERDVETSVFAKLAMFEQELRAMLPKEVEAARSAVENGTATQQNRITECRSYPLYRF 351
Query: 410 VREEVGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLPLC*AA 577
VR+E+GTEYLTGEKTRSPGEE++KV VA+N+ KHID LLECLK WNGEPLP+C* +
Sbjct: 352 VRKELGTEYLTGEKTRSPGEEVDKVFVAMNKGKHIDALLECLKGWNGEPLPIC*GS 519
Score = 173 bits (372), Expect(3) = 5e-045
Identities = 78/115 (67%), Positives = 89/115 (77%)
Frame = -2 / -1
Query: 567 QSGRGSPFHSLRHSSSGSMCLRWLMATSTLFSSSPGDLVFSPVRYSVPTSSRTNRYSG*D 388
Q GRGSPF LRHSSS SMCL +AT+TL +SSPGDLVFSPV+YSVP+S RTNR SG D
Sbjct: 509 QIGRGSPFQPLRHSSSASMCLPLFIATNTLSTSSPGDLVFSPVKYSVPSSLRTNR*SGYD 330
Query: 387 RHSLILLGTRGLPFSTAARAASTSLGSAARTCCSNSATLAKMDVSTSRSASPFGQ 223
RHS+I +PFSTA RAASTS G+ AR+ CSN A+LA DVSTSRSASP +
Sbjct: 329 RHSVIRFCCVAVPFSTALRAASTSFGNIARSSCSNMASLANTDVSTSRSASPLAK 165
Score = 37.7 bits (76), Expect(4) = 2e-069
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = +1 / +1
Query: 175 NYALMQKXRAVLVEHALA 228
NY LMQK RAVLVEHALA
Sbjct: 118 NYPLMQKMRAVLVEHALA 171
Score = 32.2 bits (64), Expect(4) = 2e-069
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +2 / +1
Query: 77 GRLHNARFCEKDLQTAI 127
G LH+ARFCEKDL I
Sbjct: 22 GHLHSARFCEKDLLLTI 72
Score = 31.3 bits (62), Expect(4) = 2e-069
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = +3 / +1
Query: 135 EAVFXYADDPCS 170
EAVF YADDPCS
Sbjct: 79 EAVFAYADDPCS 114
Score = 24.0 bits (46), Expect(3) = 5e-045
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -1 / -1
Query: 169 LHGSSAYXNTASRS 128
L GSSA NTASRS
Sbjct: 113 LQGSSA*ANTASRS 72
Score = 22.6 bits (43), Expect(3) = 5e-045
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = -2 / -1
Query: 114 RSFSQKRALWSRP 76
RSFSQKRAL P
Sbjct: 59 RSFSQKRALCRWP 21
>gb|CB881918.1|CB881918 HM11E17w HM Hordeum vulgare subsp. vulgare cDNA clone HM11E17
3-PRIME, mRNA sequence
Length = 620
Score = 217 bits (469), Expect(5) = 4e-069
Identities = 88/110 (80%), Positives = 97/110 (88%)
Frame = +2 / -3
Query: 227 PNGDAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYR 406
P A ++TSIFAKVAEFEQ +RAALPKEVEAARA+VENG+PL PNRIK+CRSYPLY+
Sbjct: 369 PTATASAPLETSIFAKVAEFEQNIRAALPKEVEAARASVENGTPLAPNRIKDCRSYPLYQ 190
Query: 407 FVREEVGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEP 556
FVRE GTEYLTGEKTRSPGEELNKVLVA+N+RKHIDPLLECLKEW P
Sbjct: 189 FVREVCGTEYLTGEKTRSPGEELNKVLVAMNERKHIDPLLECLKEWTARP 40
Score = 209 bits (451), Expect(5) = 9e-067
Identities = 97/128 (75%), Positives = 102/128 (79%)
Frame = -2 / +2
Query: 558 RGSPFHSLRHSSSGSMCLRWLMATSTLFSSSPGDLVFSPVRYSVPTSSRTNRYSG*DRHS 379
+G HSLRHSSSGSMCLR MATSTLFSSSPGD VFSPVRYSVP +SRTN SG*+R S
Sbjct: 38 QGRAVHSLRHSSSGSMCLRSFMATSTLFSSSPGDRVFSPVRYSVPHTSRTNW*SG*ERQS 217
Query: 378 LILLGTRGLPFSTAARAASTSLGSAARTCCSNSATLAKMDVSTSRSASPFGQRVLDQHRA 199
LI LG G+PFST ARAASTSLGSAAR CSNSATLAKM+VS A GQRVLDQHR
Sbjct: 218 LIRLGASGVPFSTDARAASTSLGSAARMFCSNSATLAKMEVSRGALAVAVGQRVLDQHRP 397
Query: 198 XFLHQRVV 175
LHQRVV
Sbjct: 398 QLLHQRVV 421
Score = 143 bits (306), Expect(2) = 8e-038
Identities = 65/85 (76%), Positives = 69/85 (81%)
Frame = -1 / +1
Query: 556 GLAVPLLEALEQRVDVLALVDGHEHLVQLLAGRPRLLAGQVLGADLLAHEPVQRVGPALL 377
G PL EAL+QRVDVLALV GH+HLVQLL GRP LLAGQVLGA LA E V+ VG A+L
Sbjct: 40 GARRPLFEALQQRVDVLALVHGHQHLVQLLPGRPCLLAGQVLGAAHLADELVEWVGAAVL 219
Query: 376 DPVGDQRAAVLHGRARGFHLLGQRR 302
DPVG QR AVLHGRARG HLLGQRR
Sbjct: 220 DPVGSQRRAVLHGRARGLHLLGQRR 294
Score = 86.3 bits (182), Expect(3) = 8e-027
Identities = 39/63 (61%), Positives = 42/63 (66%)
Frame = +1 / -2
Query: 358 SGPQQDQGXXXXXXXXXXXXGGRHRVPDRREDEVARRGAEQGARGHQPAQAHRPAARVPQ 537
+G Q DQG G RHRVPDRRED VAR GAEQGA GH+ AQAHRPAA VPQ
Sbjct: 238 AGSQPDQGLPLLPTLPVRPRGVRHRVPDRREDTVARGGAEQGAGGHERAQAHRPAAGVPQ 59
Query: 538 GVE 546
V+
Sbjct: 58 RVD 50
Score = 46.0 bits (94), Expect(3) = 8e-027
Identities = 20/32 (62%), Positives = 21/32 (65%)
Frame = +1 / -2
Query: 172 PNYALMQKXRAVLVEHALAKXXXXXXXGHVHL 267
PNY LMQK RAVLVEHALA G +HL
Sbjct: 424 PNYPLMQKLRAVLVEHALANGDGERAPGDLHL 329
Score = 36.3 bits (73), Expect(2) = 8e-038
Identities = 19/47 (40%), Positives = 21/47 (44%)
Frame = -3 / +2
Query: 176 LGAAXXXXXRKHRLAVXXXXXXXXXXXXXXXXXXGVQAQGLLGHLRH 36
+GAA R+HRLAV V AQGLLGHL H
Sbjct: 419 VGAARVVRVREHRLAVDRGQQILLAEAGDVEAAHVVHAQGLLGHLHH 559
Score = 34.5 bits (69), Expect(5) = 4e-069
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +3 / -2
Query: 135 EAVFXYADDPCSP 173
EAVF YADDPCSP
Sbjct: 460 EAVFAYADDPCSP 422
Score = 34.1 bits (68), Expect(5) = 4e-069
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = +2 / -2
Query: 77 GRLHNARFCEKDLQTAI 127
G LH ARFCEKDL TAI
Sbjct: 517 GGLHIARFCEKDLLTAI 467
Score = 33.1 bits (66), Expect(5) = 9e-067
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -2 / +3
Query: 126 IAVCRSFSQKRALWSRP 76
IAV RSFSQKRA+W P
Sbjct: 468 IAVSRSFSQKRAMWRPP 518
Score = 32.7 bits (65), Expect(5) = 9e-067
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = -1 / +3
Query: 169 LHGSSAYXNTASRS 128
LHGSSAY NTASRS
Sbjct: 426 LHGSSAYANTASRS 467
Score = 31.3 bits (62), Expect(5) = 9e-067
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = -1 / +3
Query: 82 PPLAFRLRDFLATCVT 35
PP+ F LR FLATC+T
Sbjct: 513 PPMLFMLRVFLATCIT 560
Score = 28.6 bits (56), Expect(5) = 4e-069
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = +2 / -1
Query: 38 DAGGQEVPEPERQGR 82
DAGGQE PE E+ GR
Sbjct: 557 DAGGQEDPEHEQHGR 513
Score = 25.8 bits (50), Expect(3) = 8e-027
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = +1 / -3
Query: 43 RWPRSP*A*TPGAA 84
RWPR P*A*T AA
Sbjct: 552 RWPRRP*A*TTWAA 511
Score = 22.6 bits (43), Expect(5) = 9e-067
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = -2 / +3
Query: 573 AQQSGRGSP 547
AQQSGRG+P
Sbjct: 24 AQQSGRGAP 50
Score = 22.1 bits (42), Expect(5) = 4e-069
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +2 / -2
Query: 545 NGEPLPLC*A 574
+G PLPLC*A
Sbjct: 52 DGAPLPLC*A 23
>gb|BQ767217.1|BQ767217 EBro08_SQ008_E10_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ008_E10 5', mRNA sequence
Length = 511
Score = 223 bits (481), Expect(4) = 2e-067
Identities = 90/114 (78%), Positives = 103/114 (90%)
Frame = +2 / +1
Query: 230 NGDAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRF 409
NG+AE DV+TS+FAK+A FEQ+VRA LPKEVEAAR+AVENG+ NRI ECRSYPLYRF
Sbjct: 136 NGEAEHDVETSVFAKLATFEQEVRAVLPKEVEAARSAVENGTAAQQNRITECRSYPLYRF 315
Query: 410 VREEVGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLPLC* 571
VR+E+GTEYLTGEKTRSPGEE++KV VA+NQ KHID LLECLKEWNGEPLP+C*
Sbjct: 316 VRKELGTEYLTGEKTRSPGEEVDKVFVAMNQGKHIDALLECLKEWNGEPLPIC* 477
Score = 188 bits (404), Expect(2) = 6e-050
Identities = 84/123 (68%), Positives = 93/123 (75%)
Frame = -2 / -3
Query: 591 SFSAGAAQQSGRGSPFHSLRHSSSGSMCLRWLMATSTLFSSSPGDLVFSPVRYSVPTSSR 412
S S + QQ GRGSPFHSLRHS S SMCL W MAT+TL +SSPGDLVFSPV+YSVP+S R
Sbjct: 497 SISQSSVQQIGRGSPFHSLRHSRSASMCLPWFMATNTLSTSSPGDLVFSPVKYSVPSSLR 318
Query: 411 TNRYSG*DRHSLILLGTRGLPFSTAARAASTSLGSAARTCCSNSATLAKMDVSTSRSASP 232
TNR SG DRHS+I +PFSTA AASTS GS ART CSN A+LA DVSTS SASP
Sbjct: 317 TNR*SGYDRHSVIRFCCAAVPFSTALLAASTSFGSTARTSCSNVASLANTDVSTSCSASP 138
Query: 231 FGQ 223
+
Sbjct: 137 LAK 129
Score = 111 bits (236), Expect = 7e-024
Identities = 53/88 (60%), Positives = 62/88 (70%)
Frame = -1 / -2
Query: 571 SAERQGLAVPLLEALEQRVDVLALVDGHEHLVQLLAGRPRLLAGQVLGADLLAHEPVQRV 392
SA RQGL +PLLEAL++ VDVLALV G+EHLV RPRLL+ QVL + LLAHEPV+RV
Sbjct: 477 SANRQGLTIPLLEALKKCVDVLALVHGNEHLVHFFPRRPRLLSSQVLCSKLLAHEPVERV 298
Query: 391 GPALLDPVGDQRAAVLHGRARGFHLLGQ 308
PA D V +A+LHG G LL Q
Sbjct: 297 RPAFRDTVLLCGSAILHGAPGGLDLLWQ 214
Score = 37.7 bits (76), Expect(4) = 2e-067
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = +1 / +1
Query: 175 NYALMQKXRAVLVEHALA 228
NY LMQK RAVLVEHALA
Sbjct: 82 NYPLMQKMRAVLVEHALA 135
Score = 29.9 bits (59), Expect(2) = 6e-050
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = -1 / -3
Query: 169 LHGSSAYXNTASRS 128
LHGS AY NTASRS
Sbjct: 77 LHGSFAYANTASRS 36
Score = 29.0 bits (57), Expect(4) = 2e-067
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +3 / +1
Query: 135 EAVFXYADDPCS 170
EAVF YA+DPCS
Sbjct: 43 EAVFAYANDPCS 78
Score = 23.5 bits (45), Expect(4) = 2e-067
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +2 / +1
Query: 92 ARFCEKDLQTAI 127
ARFCEKDL I
Sbjct: 1 ARFCEKDLLLTI 36
>gb|BQ767013.1|BQ767013 EBro08_SQ007_A24_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ007_A24 5', mRNA sequence
Length = 690
Score = 215 bits (463), Expect(4) = 1e-066
Identities = 89/114 (78%), Positives = 100/114 (87%)
Frame = +2 / +3
Query: 230 NGDAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRF 409
NG AE D +TS+ AKVA FE+++R LP+ VEAARAAVE+G+ +PNRI ECRSYPLYRF
Sbjct: 243 NGMAEFDAETSVLAKVALFEEELRKTLPRAVEAARAAVESGTAEMPNRITECRSYPLYRF 422
Query: 410 VREEVGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLPLC* 571
VREE+GT YLTGEKTRSPGEELNKVLVAINQ KHID LLECLKEWNGEPLP+C*
Sbjct: 423 VREELGTVYLTGEKTRSPGEELNKVLVAINQGKHIDALLECLKEWNGEPLPIC* 584
Score = 182 bits (391), Expect(2) = 2e-046
Identities = 80/112 (71%), Positives = 88/112 (78%)
Frame = -2 / -3
Query: 567 QSGRGSPFHSLRHSSSGSMCLRWLMATSTLFSSSPGDLVFSPVRYSVPTSSRTNRYSG*D 388
Q GRGSPFHSLRHSSS SMCL WLMATSTL SSSPGD VFSPVRY+VP+SSRTNR G +
Sbjct: 580 QMGRGSPFHSLRHSSSASMCLPWLMATSTLLSSSPGDRVFSPVRYTVPSSSRTNR*RGYE 401
Query: 387 RHSLILLGTRGLPFSTAARAASTSLGSAARTCCSNSATLAKMDVSTSRSASP 232
RHS+ILLG +P STAARAAST+ GS R+ SN AT A +VS S SA P
Sbjct: 400 RHSVILLGISAVPLSTAARAASTARGSVLRSSSSNKATFANTEVSASNSAMP 245
Score = 105 bits (224), Expect = 3e-022
Identities = 52/92 (56%), Positives = 63/92 (68%)
Frame = -1 / -2
Query: 574 SSAERQGLAVPLLEALEQRVDVLALVDGHEHLVQLLAGRPRLLAGQVLGADLLAHEPVQR 395
S A+ QG AVPLLEAL+Q +DVLALV+GHEHLV+LLAG LL+G V ++LL H+PV+R
Sbjct: 587 SLADGQGFAVPLLEALKQCIDVLALVNGHEHLVELLAG*SCLLSG*VYSSELLTHKPVER 408
Query: 394 VGPALLDPVGDQRAAVLHGRARGFHLLGQRRA 299
V L D VG A L+G A GQR A
Sbjct: 407 VRATLGDSVGHFSCAALYGSACSLDRPGQRLA 312
Score = 34.5 bits (69), Expect(4) = 1e-066
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +3 / +3
Query: 135 EAVFXYADDPCSP 173
EAVF YADDPCSP
Sbjct: 150 EAVFAYADDPCSP 188
Score = 32.2 bits (64), Expect(4) = 1e-066
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = +1 / +3
Query: 172 PNYALMQKXRAVLVEHALA 228
PNY LM+K R VLVE AL+
Sbjct: 186 PNYPLMKKLRGVLVERALS 242
Score = 29.0 bits (57), Expect(4) = 1e-066
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = +2 / +3
Query: 77 GRLHNARFCEKDL 115
G LH ARFCEKDL
Sbjct: 93 GGLHVARFCEKDL 131
Score = 24.0 bits (46), Expect(2) = 2e-046
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -1 / -3
Query: 169 LHGSSAYXNTASRS 128
L GSSA NTASRS
Sbjct: 184 LQGSSA*ANTASRS 143
>gb|BQ756566.1|BQ756566 EBem09_SQ003_B12_R embryo, 1 Day germination, no treatment, cv
Optic, EBem09 Hordeum vulgare subsp. vulgare cDNA clone
EBem09_SQ003_B12 5', mRNA sequence
Length = 389
Score = 244 bits (527), Expect(2) = 5e-065
Identities = 99/115 (86%), Positives = 108/115 (93%)
Frame = +2 / +1
Query: 230 NGDAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRF 409
NGD ER ++TSIFAKVAEFEQ +RAALPKEVEAARA+VENG+PL PNRIK+CRSYPLY+F
Sbjct: 34 NGDGERALETSIFAKVAEFEQNIRAALPKEVEAARASVENGTPLAPNRIKDCRSYPLYQF 213
Query: 410 VREEVGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLPLC*A 574
VRE GTEYLTGEKTRSPGEELNKVLVA+N+RKHIDPLLECLKEWNG PLPLC*A
Sbjct: 214 VREVCGTEYLTGEKTRSPGEELNKVLVAMNERKHIDPLLECLKEWNGAPLPLC*A 378
Score = 205 bits (443), Expect(2) = 9e-054
Identities = 93/114 (81%), Positives = 99/114 (86%)
Frame = -2 / -1
Query: 573 AQQSGRGSPFHSLRHSSSGSMCLRWLMATSTLFSSSPGDLVFSPVRYSVPTSSRTNRYSG 394
AQQSGRG+PFHSLRHSSSGSMCLR MATSTLFSSSPGD VFSPVRYSVP +SRTN SG
Sbjct: 377 AQQSGRGAPFHSLRHSSSGSMCLRSFMATSTLFSSSPGDRVFSPVRYSVPHTSRTNW*SG 198
Query: 393 *DRHSLILLGTRGLPFSTAARAASTSLGSAARTCCSNSATLAKMDVSTSRSASP 232
*+R SLI LG G+PFST ARAASTSLGSAAR CSNSATLAKM+VS +RS SP
Sbjct: 197 *ERQSLIRLGASGVPFSTDARAASTSLGSAARMFCSNSATLAKMEVSRARSPSP 36
Score = 155 bits (332), Expect = 4e-037
Identities = 71/90 (78%), Positives = 75/90 (83%)
Frame = -1 / -3
Query: 571 SAERQGLAVPLLEALEQRVDVLALVDGHEHLVQLLAGRPRLLAGQVLGADLLAHEPVQRV 392
SAE QG AVPL EAL+QRVDVLALV GH+HLVQLL GRP LLAGQVLGA LA E V+ V
Sbjct: 375 SAEWQGRAVPLFEALQQRVDVLALVHGHQHLVQLLPGRPCLLAGQVLGAAHLADELVEWV 196
Query: 391 GPALLDPVGDQRAAVLHGRARGFHLLGQRR 302
G A+LDPVG QR AVLHGRARG HLLGQRR
Sbjct: 195 GAAVLDPVGSQRRAVLHGRARGLHLLGQRR 106
Score = 104 bits (222), Expect = 6e-022
Identities = 48/72 (66%), Positives = 50/72 (69%)
Frame = +1 / +3
Query: 358 SGPQQDQGXXXXXXXXXXXXGGRHRVPDRREDEVARRGAEQGARGHQPAQAHRPAARVPQ 537
+G Q DQG G RHRVPDRRED VAR GAEQGA GH+ AQAHRPAA VPQ
Sbjct: 162 AGSQPDQGLPLLPTLPVRPRGVRHRVPDRREDTVARGGAEQGAGGHERAQAHRPAAGVPQ 341
Query: 538 GVERRAPAALLS 573
VERRAPA LLS
Sbjct: 342 RVERRAPATLLS 377
Score = 24.9 bits (48), Expect(2) = 9e-054
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -2 / -3
Query: 228 GQRVLDQHR 202
GQRVLDQHR
Sbjct: 33 GQRVLDQHR 7
Score = 24.0 bits (46), Expect(2) = 5e-065
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1 / +1
Query: 199 RAVLVEHALA 228
RAVLVEHALA
Sbjct: 4 RAVLVEHALA 33
>gb|AL503163.1|AL503163 AL503163 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW09O20u 3', mRNA sequence
Length = 431
Score = 244 bits (527), Expect = 5e-064
Identities = 99/115 (86%), Positives = 108/115 (93%)
Frame = +2 / -2
Query: 230 NGDAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRF 409
NGD ER ++TSIFAKVAEFEQ +RAALPKEVEAARA+VENG+PL PNRIK+CRSYPLY+F
Sbjct: 385 NGDGERALETSIFAKVAEFEQNIRAALPKEVEAARASVENGTPLAPNRIKDCRSYPLYQF 206
Query: 410 VREEVGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLPLC*A 574
VRE GTEYLTGEKTRSPGEELNKVLVA+N+RKHIDPLLECLKEWNG PLPLC*A
Sbjct: 205 VREVCGTEYLTGEKTRSPGEELNKVLVAMNERKHIDPLLECLKEWNGAPLPLC*A 41
Score = 211 bits (456), Expect = 3e-054
Identities = 97/130 (74%), Positives = 104/130 (80%)
Frame = -2 / +3
Query: 573 AQQSGRGSPFHSLRHSSSGSMCLRWLMATSTLFSSSPGDLVFSPVRYSVPTSSRTNRYSG 394
AQQSGRG+PFHSLRHSSSGSMCLR MATSTLFSSSPGD VFSPVRYSVP +SRTN SG
Sbjct: 42 AQQSGRGAPFHSLRHSSSGSMCLRSFMATSTLFSSSPGDRVFSPVRYSVPHTSRTNW*SG 221
Query: 393 *DRHSLILLGTRGLPFSTAARAASTSLGSAARTCCSNSATLAKMDVSTSRSASPFGQRVL 214
*+R SLI LG G+PFST ARAASTSLGSAAR CSNSATLAKM+VS +RS SP
Sbjct: 222 *ERQSLIRLGASGVPFSTDARAASTSLGSAARMFCSNSATLAKMEVSRARSPSPLANVCS 401
Query: 213 DQHRAXFLHQ 184
+ R LHQ
Sbjct: 402 TKXRPQLLHQ 431
Score = 152 bits (326), Expect = 3e-036
Identities = 70/90 (77%), Positives = 74/90 (82%)
Frame = -1 / +2
Query: 571 SAERQGLAVPLLEALEQRVDVLALVDGHEHLVQLLAGRPRLLAGQVLGADLLAHEPVQRV 392
SAE G AVPL EAL+QRVDVLALV GH+HLVQLL GRP LLAGQVLGA LA E V+ V
Sbjct: 44 SAEWXGRAVPLFEALQQRVDVLALVHGHQHLVQLLPGRPCLLAGQVLGAAHLADELVEWV 223
Query: 391 GPALLDPVGDQRAAVLHGRARGFHLLGQRR 302
G A+LDPVG QR AVLHGRARG HLLGQRR
Sbjct: 224 GAAVLDPVGSQRRAVLHGRARGLHLLGQRR 313
Score = 102 bits (218), Expect(2) = 1e-021
Identities = 47/72 (65%), Positives = 49/72 (68%)
Frame = +1 / -1
Query: 358 SGPQQDQGXXXXXXXXXXXXGGRHRVPDRREDEVARRGAEQGARGHQPAQAHRPAARVPQ 537
+G Q DQG G RHRVPDRRED VAR GAEQGA GH+ AQAHRPAA VPQ
Sbjct: 257 AGSQPDQGLPLLPTLPVRPRGVRHRVPDRREDTVARGGAEQGAGGHERAQAHRPAAGVPQ 78
Query: 538 GVERRAPAALLS 573
VERRAP LLS
Sbjct: 77 RVERRAPXTLLS 42
Score = 21.7 bits (41), Expect(2) = 1e-021
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +1 / -1
Query: 184 LMQKXRAVLVEHALAKXXXXXXXGHVHL 267
LMQK RAVL + + G +HL
Sbjct: 431 LMQKLRAVLGRAHVGQRRRRARPGDLHL 348
>gb|AV919026.1|AV919026 AV919026 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags4b16 3', mRNA sequence
Length = 659
Score = 223 bits (481), Expect(3) = 1e-063
Identities = 90/114 (78%), Positives = 103/114 (90%)
Frame = +2 / -2
Query: 230 NGDAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRF 409
NG+AE DV+TS+FAK+A FEQ+VRA LPKEVEAAR+AVENG+ NRI ECRSYPLYRF
Sbjct: 574 NGEAEHDVETSVFAKLATFEQEVRAVLPKEVEAARSAVENGTAAQQNRITECRSYPLYRF 395
Query: 410 VREEVGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLPLC* 571
VR+E+GTEYLTGEKTRSPGEE++KV VA+NQ KHID LLECLKEWNGEPLP+C*
Sbjct: 394 VRKELGTEYLTGEKTRSPGEEVDKVFVAMNQGKHIDALLECLKEWNGEPLPIC* 233
Score = 188 bits (404), Expect = 5e-047
Identities = 84/123 (68%), Positives = 93/123 (75%)
Frame = -2 / +3
Query: 591 SFSAGAAQQSGRGSPFHSLRHSSSGSMCLRWLMATSTLFSSSPGDLVFSPVRYSVPTSSR 412
S S + QQ GRGSPFHSLRHS S SMCL W MAT+TL +SSPGDLVFSPV+YSVP+S R
Sbjct: 213 SISQSSVQQIGRGSPFHSLRHSRSASMCLPWFMATNTLSTSSPGDLVFSPVKYSVPSSLR 392
Query: 411 TNRYSG*DRHSLILLGTRGLPFSTAARAASTSLGSAARTCCSNSATLAKMDVSTSRSASP 232
TNR SG DRHS+I +PFSTA AASTS GS ART CSN A+LA DVSTS SASP
Sbjct: 393 TNR*SGYDRHSVIRFCCAAVPFSTALLAASTSFGSTARTSCSNVASLANTDVSTSCSASP 572
Query: 231 FGQ 223
+
Sbjct: 573 LAK 581
Score = 111 bits (236), Expect = 7e-024
Identities = 53/88 (60%), Positives = 62/88 (70%)
Frame = -1 / +2
Query: 571 SAERQGLAVPLLEALEQRVDVLALVDGHEHLVQLLAGRPRLLAGQVLGADLLAHEPVQRV 392
SA RQGL +PLLEAL++ VDVLALV G+EHLV RPRLL+ QVL + LLAHEPV+RV
Sbjct: 233 SANRQGLTIPLLEALKKCVDVLALVHGNEHLVHFFPRRPRLLSSQVLCSKLLAHEPVERV 412
Query: 391 GPALLDPVGDQRAAVLHGRARGFHLLGQ 308
PA D V +A+LHG G LL Q
Sbjct: 413 RPAFRDTVLLCGSAILHGAPGGLDLLWQ 496
Score = 32.2 bits (64), Expect(3) = 1e-063
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +1 / -2
Query: 184 LMQKXRAVLVEHALA 228
LMQK RAVLVEHALA
Sbjct: 619 LMQKMRAVLVEHALA 575
Score = 27.2 bits (53), Expect(3) = 1e-063
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +3 / -1
Query: 144 FXYADDPCSPQLRADAE 194
F YADDPCS AE
Sbjct: 659 FAYADDPCSANYPTHAE 609
>gb|AV921319.1|AV921319 AV921319 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags23a16 3', mRNA sequence
Length = 586
Score = 213 bits (460), Expect(3) = 4e-063
Identities = 88/123 (71%), Positives = 105/123 (85%)
Frame = +2 / -2
Query: 230 NGDAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRF 409
NG+AER+V+TS+F KVA+FEQ++ A LP+EVEAAR AVENG+ PNRI +CRSYPLYRF
Sbjct: 471 NGEAERNVETSVFGKVAKFEQELCATLPQEVEAARGAVENGTAAEPNRIVDCRSYPLYRF 292
Query: 410 VREEVGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLPLC*AAPAEK 589
VREE+GT YLTGEKTRSPGEE++KV VA+NQ KHID LLECLKEWNGEPLP+ *+ +
Sbjct: 291 VREELGTVYLTGEKTRSPGEEVDKVFVAMNQGKHIDALLECLKEWNGEPLPIS*SMR*RE 112
Query: 590 DNV 598
D V
Sbjct: 111 DAV 103
Score = 177 bits (382), Expect(3) = 3e-050
Identities = 77/113 (68%), Positives = 88/113 (77%)
Frame = -2 / +2
Query: 561 GRGSPFHSLRHSSSGSMCLRWLMATSTLFSSSPGDLVFSPVRYSVPTSSRTNRYSG*DRH 382
GRGSPFHSLRHSSS SMCL W MAT+TL +SSPGD VFSPV+Y+VP+SSRTNRY G DR
Sbjct: 140 GRGSPFHSLRHSSSASMCLPWFMATNTLSTSSPGDRVFSPVKYTVPSSSRTNRYRGYDRQ 319
Query: 381 SLILLGTRGLPFSTAARAASTSLGSAARTCCSNSATLAKMDVSTSRSASPFGQ 223
S I G+ +PFSTA AASTS GS A++ CSN ATL +VST RSASP +
Sbjct: 320 STIRFGSAAVPFSTAPLAASTS*GSVAQSSCSNLATLPNTEVSTLRSASPLAR 478
Score = 111 bits (238), Expect = 4e-024
Identities = 52/85 (61%), Positives = 63/85 (74%)
Frame = -1 / +1
Query: 568 AERQGLAVPLLEALEQRVDVLALVDGHEHLVQLLAGRPRLLAGQVLGADLLAHEPVQRVG 389
A+R+GLAVPLLEAL+QR+DVL LV G+EH V LLAG P LL+GQV A LLAH+PVQRV
Sbjct: 133 ADREGLAVPLLEALQQRIDVLTLVHGNEHFVHLLAG*PSLLSGQVHRAQLLAHKPVQRV* 312
Query: 388 PALLDPVGDQRAAVLHGRARGFHLL 314
PA+ D V A+LH + +LL
Sbjct: 313 PAVYDTVWFCGGAILHCTSSSLNLL 387
Score = 35.9 bits (72), Expect(3) = 4e-063
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +1 / -2
Query: 175 NYALMQKXRAVLVEHALA 228
NY LM+K RAVLVEHALA
Sbjct: 525 NYPLMKKMRAVLVEHALA 472
Score = 31.3 bits (62), Expect(3) = 4e-063
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = +3 / -2
Query: 135 EAVFXYADDPCS 170
EAVF YADDPCS
Sbjct: 564 EAVFAYADDPCS 529
Score = 30.4 bits (60), Expect(3) = 3e-050
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = -2 / +1
Query: 228 GQRVLDQHRAXFLHQRVV 175
GQ VL QHR LH+RVV
Sbjct: 472 GQGVLHQHRTHLLHERVV 525
Score = 29.0 bits (57), Expect(3) = 3e-050
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = -1 / +2
Query: 169 LHGSSAYXNTASRS 128
L GSSAY NTASRS
Sbjct: 530 LQGSSAYANTASRS 571
>gb|BF258018.2|BF258018 HVSMEf0014I06f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0014I06f, mRNA sequence
Length = 570
Score = 190 bits (410), Expect(4) = 2e-062
Identities = 76/87 (87%), Positives = 83/87 (95%)
Frame = +2 / -2
Query: 314 KEVEAARAAVENGSPLVPNRIKECRSYPLYRFVREEVGTEYLTGEKTRSPGEELNKVLVA 493
KEV+AARA+VENG+PL PNRIK+CRSYPLY+FVRE GTEYLTGEKTRSPGEELNKVLVA
Sbjct: 323 KEVKAARASVENGTPLAPNRIKDCRSYPLYQFVREVCGTEYLTGEKTRSPGEELNKVLVA 144
Query: 494 INQRKHIDPLLECLKEWNGEPLPLC*A 574
+N+RKHIDPLLECLKEWNG PLPLC*A
Sbjct: 143 MNERKHIDPLLECLKEWNGAPLPLC*A 63
Score = 158 bits (339), Expect(2) = 3e-043
Identities = 71/89 (79%), Positives = 76/89 (85%)
Frame = -2 / +1
Query: 573 AQQSGRGSPFHSLRHSSSGSMCLRWLMATSTLFSSSPGDLVFSPVRYSVPTSSRTNRYSG 394
AQQSGRG+PFHSLRHSSSGSMCLR MATSTLFSSSPGD VFSPVRYSVP +SRTN SG
Sbjct: 64 AQQSGRGAPFHSLRHSSSGSMCLRSFMATSTLFSSSPGDRVFSPVRYSVPHTSRTNW*SG 243
Query: 393 *DRHSLILLGTRGLPFSTAARAASTSLGS 307
*+R SLI LG G+PFST ARAA TSL +
Sbjct: 244 *ERQSLIRLGASGVPFSTDARAAFTSLAA 330
Score = 148 bits (317), Expect(2) = 1e-036
Identities = 68/87 (78%), Positives = 72/87 (82%)
Frame = -1 / +3
Query: 571 SAERQGLAVPLLEALEQRVDVLALVDGHEHLVQLLAGRPRLLAGQVLGADLLAHEPVQRV 392
SAE QG AVPL EAL+QRVDVLALV GH+HLVQLL GRP LLAGQVLGA LA E V+ V
Sbjct: 66 SAEWQGRAVPLFEALQQRVDVLALVHGHQHLVQLLPGRPCLLAGQVLGAAHLADELVEWV 245
Query: 391 GPALLDPVGDQRAAVLHGRARGFHLLG 311
G A+LDPVG QR AVLHGRARG HLLG
Sbjct: 246 GAAVLDPVGSQRRAVLHGRARGLHLLG 326
Score = 104 bits (222), Expect = 6e-022
Identities = 48/72 (66%), Positives = 50/72 (69%)
Frame = +1 / -1
Query: 358 SGPQQDQGXXXXXXXXXXXXGGRHRVPDRREDEVARRGAEQGARGHQPAQAHRPAARVPQ 537
+G Q DQG G RHRVPDRRED VAR GAEQGA GH+ AQAHRPAA VPQ
Sbjct: 279 AGSQPDQGLPLLPTLPVRPRGVRHRVPDRREDTVARGGAEQGAGGHERAQAHRPAAGVPQ 100
Query: 538 GVERRAPAALLS 573
VERRAPA LLS
Sbjct: 99 RVERRAPATLLS 64
Score = 46.4 bits (95), Expect(4) = 2e-062
Identities = 18/29 (62%), Positives = 23/29 (79%)
Frame = +2 / -3
Query: 230 NGDAERDVDTSIFAKVAEFEQQVRAALPK 316
NGD +R + SIFAKV EF+Q +RAALP+
Sbjct: 406 NGDGKRPLKPSIFAKVREFDQNIRAALPR 320
Score = 37.3 bits (75), Expect(2) = 3e-043
Identities = 20/42 (47%), Positives = 22/42 (52%)
Frame = -2 / +3
Query: 315 LGSAARTCCSNSATLAKMDVSTSRSASPFGQRVLDQHRAXFL 190
LGSAAR SNS TLAKM+ R SP L+ FL
Sbjct: 321 LGSAARMFWSNSRTLAKMEGFRGRFPSPLANACLNSTGRSFL 446
Score = 32.7 bits (65), Expect(4) = 2e-062
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = +2 / -3
Query: 68 ERQGRLHNARFCEKDLQTAI 127
E+QGRLH ARF +KDL T I
Sbjct: 565 EQQGRLHIARFGKKDLLTPI 506
Score = 26.7 bits (52), Expect(4) = 2e-062
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +1 / -3
Query: 172 PNYALMQKXRAVLVEHALA 228
PN L++K R VL +HALA
Sbjct: 463 PNNPLIKKLRPVLFKHALA 407
Score = 25.4 bits (49), Expect(2) = 1e-036
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -2 / +2
Query: 228 GQRVLDQHRAXFLHQRVV 175
GQRVL+QHR RV+
Sbjct: 407 GQRVLEQHRPKLFD*RVI 460
>gb|BJ459164.1|BJ459164 BJ459164 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak34p05 3', mRNA sequence
Length = 691
Score = 218 bits (471), Expect(2) = 2e-061
Identities = 88/116 (75%), Positives = 104/116 (89%)
Frame = +2 / -1
Query: 230 NGDAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRF 409
NG+AERDV+TS+FAK+A FEQ++RA LPKEVEAAR+AVENG+ NRI ECRSYPLYRF
Sbjct: 610 NGEAERDVETSVFAKLAMFEQELRAMLPKEVEAARSAVENGTATQQNRITECRSYPLYRF 431
Query: 410 VREEVGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLPLC*AA 577
VR+E+GTEYLTGEKTRSPGEE++KV VA+N+ KHID LLECLK WNGEPLP+C* +
Sbjct: 430 VRKELGTEYLTGEKTRSPGEEVDKVFVAMNKGKHIDALLECLKGWNGEPLPIC*GS 263
Score = 172 bits (371), Expect = 2e-042
Identities = 78/112 (69%), Positives = 88/112 (78%)
Frame = -2 / +3
Query: 567 QSGRGSPFHSLRHSSSGSMCLRWLMATSTLFSSSPGDLVFSPVRYSVPTSSRTNRYSG*D 388
Q GRGSPF LRHSSS SMCL +AT+TL +SSPGDLVFSPV+YSVP+S RTNR SG D
Sbjct: 273 QIGRGSPFQPLRHSSSASMCLPLFIATNTLSTSSPGDLVFSPVKYSVPSSLRTNR*SGYD 452
Query: 387 RHSLILLGTRGLPFSTAARAASTSLGSAARTCCSNSATLAKMDVSTSRSASP 232
RHS+I +PFSTA RAASTS G+ AR+ CSN A+LA DVSTSRSASP
Sbjct: 453 RHSVIRFCCVAVPFSTALRAASTSFGNIARSSCSNMASLANTDVSTSRSASP 608
Score = 37.7 bits (76), Expect(2) = 2e-061
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = +1 / -1
Query: 175 NYALMQKXRAVLVEHALA 228
NY LMQK RAVLVEHALA
Sbjct: 664 NYPLMQKMRAVLVEHALA 611
>gb|BM370557.2|BM370557 EBro08_SQ004_J10_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ004_J10 5', mRNA sequence
Length = 620
Score = 219 bits (473), Expect(2) = 4e-061
Identities = 89/114 (78%), Positives = 103/114 (90%)
Frame = +2 / +2
Query: 230 NGDAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRF 409
NG+AER+V+TS+FAKVA+FEQ++ A LP+EVEAAR AVENG+ PNRI +CRSYPLYRF
Sbjct: 77 NGEAERNVETSVFAKVAKFEQELCATLPQEVEAARGAVENGTAAEPNRIVDCRSYPLYRF 256
Query: 410 VREEVGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLPLC* 571
VREE+GT YLTGEKTRSPGEE++KV VA+NQ KHID LLECLKEWNGEPLPLC*
Sbjct: 257 VREELGTVYLTGEKTRSPGEEVDKVFVAMNQGKHIDALLECLKEWNGEPLPLC* 418
Score = 179 bits (386), Expect(2) = 1e-047
Identities = 78/115 (67%), Positives = 89/115 (77%)
Frame = -2 / -3
Query: 567 QSGRGSPFHSLRHSSSGSMCLRWLMATSTLFSSSPGDLVFSPVRYSVPTSSRTNRYSG*D 388
Q GRGSPFHSLRHSSS SMCL W +AT+TL +SSPGD VFSPV+Y+VP+SSRTNRY G D
Sbjct: 414 QRGRGSPFHSLRHSSSASMCLPWFIATNTLSTSSPGDRVFSPVKYTVPSSSRTNRYRGYD 235
Query: 387 RHSLILLGTRGLPFSTAARAASTSLGSAARTCCSNSATLAKMDVSTSRSASPFGQ 223
R S I G+ +PFSTA AASTS GS A + CSN ATLA +VST RSASP +
Sbjct: 234 RQSTIRFGSAAVPFSTAPLAASTS*GSVAHSSCSNLATLANTEVSTLRSASPLAK 70
Score = 105 bits (224), Expect = 3e-022
Identities = 51/85 (60%), Positives = 60/85 (70%)
Frame = -1 / -2
Query: 568 AERQGLAVPLLEALEQRVDVLALVDGHEHLVQLLAGRPRLLAGQVLGADLLAHEPVQRVG 389
AERQGLAVP LEA +QRVDVL LV ++HLV LL G P LL+GQV A LLAH+PVQRV
Sbjct: 415 AERQGLAVPFLEAFQQRVDVLTLVHSNKHLVHLLPG*PCLLSGQVHRAQLLAHKPVQRV* 236
Query: 388 PALLDPVGDQRAAVLHGRARGFHLL 314
PA+ D V A+LH + +LL
Sbjct: 235 PAVYDTVWFCGGAILHCTSSSLNLL 161
Score = 35.9 bits (72), Expect(2) = 4e-061
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +1 / +2
Query: 175 NYALMQKXRAVLVEHALA 228
NY LM+K RAVLVEHALA
Sbjct: 23 NYPLMKKMRAVLVEHALA 76
Score = 30.4 bits (60), Expect(2) = 1e-047
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = -2 / -2
Query: 228 GQRVLDQHRAXFLHQRVV 175
GQ VL QHR LH+RVV
Sbjct: 76 GQGVLHQHRTHLLHERVV 23
>gb|AV918666.1|AV918666 AV918666 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags21n01 3', mRNA sequence
Length = 670
Score = 218 bits (471), Expect(2) = 2e-060
Identities = 88/116 (75%), Positives = 104/116 (89%)
Frame = +2 / -2
Query: 230 NGDAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRF 409
NG+AERDV+TS+FAK+A FEQ++RA LPKEVEAAR+AVENG+ NRI ECRSYPLYRF
Sbjct: 585 NGEAERDVETSVFAKLAMFEQELRAMLPKEVEAARSAVENGTATQQNRITECRSYPLYRF 406
Query: 410 VREEVGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLPLC*AA 577
VR+E+GTEYLTGEKTRSPGEE++KV VA+N+ KHID LLECLK WNGEPLP+C* +
Sbjct: 405 VRKELGTEYLTGEKTRSPGEEVDKVFVAMNKGKHIDALLECLKGWNGEPLPIC*GS 238
Score = 173 bits (372), Expect = 1e-042
Identities = 78/115 (67%), Positives = 89/115 (77%)
Frame = -2 / +2
Query: 567 QSGRGSPFHSLRHSSSGSMCLRWLMATSTLFSSSPGDLVFSPVRYSVPTSSRTNRYSG*D 388
Q GRGSPF LRHSSS SMCL +AT+TL +SSPGDLVFSPV+YSVP+S RTNR SG D
Sbjct: 248 QIGRGSPFQPLRHSSSASMCLPLFIATNTLSTSSPGDLVFSPVKYSVPSSLRTNR*SGYD 427
Query: 387 RHSLILLGTRGLPFSTAARAASTSLGSAARTCCSNSATLAKMDVSTSRSASPFGQ 223
RHS+I +PFSTA RAASTS G+ AR+ CSN A+LA DVSTSRSASP +
Sbjct: 428 RHSVIRFCCVAVPFSTALRAASTSFGNIARSSCSNMASLANTDVSTSRSASPLAK 592
Score = 34.1 bits (68), Expect(2) = 2e-060
Identities = 15/19 (78%), Positives = 15/19 (78%)
Frame = +1 / -2
Query: 172 PNYALMQKXRAVLVEHALA 228
P LMQK RAVLVEHALA
Sbjct: 642 PTTPLMQKMRAVLVEHALA 586
>gb|AL501352.1|AL501352 AL501352 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW03O13u 3', mRNA sequence
Length = 626
Score = 223 bits (481), Expect = 1e-057
Identities = 90/114 (78%), Positives = 103/114 (90%)
Frame = +2 / -3
Query: 230 NGDAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRF 409
NG+AE DV+TS+FAK+A FEQ+VRA LPKEVEAAR+AVENG+ NRI ECRSYPLYRF
Sbjct: 546 NGEAEHDVETSVFAKLATFEQEVRAVLPKEVEAARSAVENGTAAQQNRITECRSYPLYRF 367
Query: 410 VREEVGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLPLC* 571
VR+E+GTEYLTGEKTRSPGEE++KV VA+NQ KHID LLECLKEWNGEPLP+C*
Sbjct: 366 VRKELGTEYLTGEKTRSPGEEVDKVFVAMNQGKHIDALLECLKEWNGEPLPIC* 205
Score = 188 bits (404), Expect = 5e-047
Identities = 84/123 (68%), Positives = 93/123 (75%)
Frame = -2 / +2
Query: 591 SFSAGAAQQSGRGSPFHSLRHSSSGSMCLRWLMATSTLFSSSPGDLVFSPVRYSVPTSSR 412
S S + QQ GRGSPFHSLRHS S SMCL W MAT+TL +SSPGDLVFSPV+YSVP+S R
Sbjct: 185 SISQSSVQQIGRGSPFHSLRHSRSASMCLPWFMATNTLSTSSPGDLVFSPVKYSVPSSLR 364
Query: 411 TNRYSG*DRHSLILLGTRGLPFSTAARAASTSLGSAARTCCSNSATLAKMDVSTSRSASP 232
TNR SG DRHS+I +PFSTA AASTS GS ART CSN A+LA DVSTS SASP
Sbjct: 365 TNR*SGYDRHSVIRFCCAAVPFSTALLAASTSFGSTARTSCSNVASLANTDVSTSCSASP 544
Query: 231 FGQ 223
+
Sbjct: 545 LAK 553
Score = 111 bits (236), Expect = 7e-024
Identities = 53/88 (60%), Positives = 62/88 (70%)
Frame = -1 / +1
Query: 571 SAERQGLAVPLLEALEQRVDVLALVDGHEHLVQLLAGRPRLLAGQVLGADLLAHEPVQRV 392
SA RQGL +PLLEAL++ VDVLALV G+EHLV RPRLL+ QVL + LLAHEPV+RV
Sbjct: 205 SANRQGLTIPLLEALKKCVDVLALVHGNEHLVHFFPRRPRLLSSQVLCSKLLAHEPVERV 384
Query: 391 GPALLDPVGDQRAAVLHGRARGFHLLGQ 308
PA D V +A+LHG G LL Q
Sbjct: 385 RPAFRDTVLLCGSAILHGAPGGLDLLWQ 468
>gb|BE438184.1|BE438184 SFR010.H12F990722 ITEC SFR Barley Leaf Epidermis Library Hordeum
vulgare subsp. vulgare cDNA clone SFR010.H12, mRNA
sequence
Length = 534
Score = 205 bits (443), Expect(2) = 1e-057
Identities = 83/110 (75%), Positives = 98/110 (89%)
Frame = +2 / +2
Query: 248 DVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRFVREEVG 427
DV+TS+FAK+A FEQ++RA LPKEVEAAR+AVENG+ NRI ECRSYPLYRFVR+E+G
Sbjct: 86 DVETSVFAKLAMFEQELRAMLPKEVEAARSAVENGTATQQNRITECRSYPLYRFVRKELG 265
Query: 428 TEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLPLC*AA 577
TEYLTGEKTRSPGEE++KV VA+N+ KHID LLECLK WNGEPLP+C* +
Sbjct: 266 TEYLTGEKTRSPGEEVDKVFVAMNKGKHIDALLECLKGWNGEPLPIC*GS 415
Score = 161 bits (347), Expect = 4e-039
Identities = 73/107 (68%), Positives = 83/107 (77%)
Frame = -2 / -1
Query: 567 QSGRGSPFHSLRHSSSGSMCLRWLMATSTLFSSSPGDLVFSPVRYSVPTSSRTNRYSG*D 388
Q GRGSPF LRHSSS SMCL +AT+TL +SSPGDLVFSPV+YSVP+S RTNR SG D
Sbjct: 405 QIGRGSPFQPLRHSSSASMCLPLFIATNTLSTSSPGDLVFSPVKYSVPSSLRTNR*SGYD 226
Query: 387 RHSLILLGTRGLPFSTAARAASTSLGSAARTCCSNSATLAKMDVSTS 247
RHS+I +PFSTA RAASTS G+ AR+ CSN A+LA DVSTS
Sbjct: 225 RHSVIRFCCVAVPFSTALRAASTSFGNIARSSCSNMASLANTDVSTS 85
Score = 37.7 bits (76), Expect(2) = 1e-057
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = +1 / +3
Query: 175 NYALMQKXRAVLVEHALA 228
NY LMQK RAVLVEHALA
Sbjct: 15 NYPLMQKMRAVLVEHALA 68
>gb|AV928876.1|AV928876 AV928876 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd20a10 3', mRNA sequence
Length = 644
Score = 203 bits (438), Expect(2) = 6e-057
Identities = 82/110 (74%), Positives = 95/110 (86%)
Frame = +2 / -2
Query: 263 IFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRFVREEVGTEYLT 442
+FAK+A FEQ++RA LPKEVEAAR+AVENG+ NRI ECRSYPLYRFVR+E+GTEYLT
Sbjct: 529 VFAKLATFEQELRAVLPKEVEAARSAVENGTAAQQNRISECRSYPLYRFVRKELGTEYLT 350
Query: 443 GEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLPLC*AAPAEKD 592
GEKTRSPGEE++KV VA+NQ KHID LLECLKEWNGEPLP+C* E +
Sbjct: 349 GEKTRSPGEEVDKVFVAMNQGKHIDALLECLKEWNGEPLPIC*TEDPEME 200
Score = 162 bits (348), Expect(2) = 6e-040
Identities = 72/108 (66%), Positives = 80/108 (74%)
Frame = -2 / +3
Query: 591 SFSAGAAQQSGRGSPFHSLRHSSSGSMCLRWLMATSTLFSSSPGDLVFSPVRYSVPTSSR 412
S S + QQ GRGSPFHS RHS S SMCL W MAT+TL +SSPGD VFSPV+YSVP+S R
Sbjct: 201 SISGSSVQQIGRGSPFHSFRHSRSASMCLPWFMATNTLSTSSPGDRVFSPVKYSVPSSLR 380
Query: 411 TNRYSG*DRHSLILLGTRGLPFSTAARAASTSLGSAARTCCSNSATLA 268
TNR SG DRHS I +PFSTA AASTS GS AR+ CSN A+LA
Sbjct: 381 TNR*SGYDRHSEIRFCCAAVPFSTALLAASTSFGSTARSSCSNVASLA 524
Score = 112 bits (240), Expect = 2e-024
Identities = 53/88 (60%), Positives = 63/88 (71%)
Frame = -1 / +2
Query: 571 SAERQGLAVPLLEALEQRVDVLALVDGHEHLVQLLAGRPRLLAGQVLGADLLAHEPVQRV 392
SA+RQGL +PLL+AL++RVDVLALV G+EHLV L RPRLL QVL + LLAHEPV+RV
Sbjct: 221 SADRQGLTIPLLQALKERVDVLALVHGNEHLVHLFPRRPRLLPSQVLRSKLLAHEPVERV 400
Query: 391 GPALLDPVGDQRAAVLHGRARGFHLLGQ 308
P D V +A+LHG G LL Q
Sbjct: 401 RPTFGDTVLLCCSAILHGAPGGLDLLWQ 484
Score = 37.7 bits (76), Expect(2) = 6e-057
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = +1 / -1
Query: 175 NYALMQKXRAVLVEHALA 228
NY LMQK RAVLVEHALA
Sbjct: 617 NYPLMQKMRAVLVEHALA 564
Score = 22.1 bits (42), Expect(2) = 6e-040
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = -2 / +1
Query: 264 MDVSTSRSASPFGQ 223
+DVSTS SASP +
Sbjct: 529 LDVSTSCSASPLAK 570
>gb|AL500991.1|AL500991 AL500991 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW02K13u 3', mRNA sequence
Length = 385
Score = 220 bits (475), Expect = 8e-057
Identities = 89/101 (88%), Positives = 96/101 (95%)
Frame = +2 / -1
Query: 272 KVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRFVREEVGTEYLTGEK 451
KVAEFEQ +RAALPKEVEAARA+VENG+PL PNRIK+CRSYPLY+FVRE GTEYLTGEK
Sbjct: 343 KVAEFEQNIRAALPKEVEAARASVENGTPLAPNRIKDCRSYPLYQFVREVCGTEYLTGEK 164
Query: 452 TRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLPLC*A 574
TRSPGEELNKVLVA+N+RKHIDPLLECLKEWNG PLPLC*A
Sbjct: 163 TRSPGEELNKVLVAMNERKHIDPLLECLKEWNGAPLPLC*A 41
Score = 188 bits (404), Expect = 5e-047
Identities = 84/103 (81%), Positives = 89/103 (86%)
Frame = -2 / +3
Query: 573 AQQSGRGSPFHSLRHSSSGSMCLRWLMATSTLFSSSPGDLVFSPVRYSVPTSSRTNRYSG 394
AQQSGRG+PFHSLRHSSSGSMCLR MATSTLFSSSPGD VFSPVRYSVP +SRTN SG
Sbjct: 42 AQQSGRGAPFHSLRHSSSGSMCLRSFMATSTLFSSSPGDRVFSPVRYSVPHTSRTNWXSG 221
Query: 393 *DRHSLILLGTRGLPFSTAARAASTSLGSAARTCCSNSATLAK 265
*+R SLI LG G+PFST ARAASTSLGSAAR CSNSATL +
Sbjct: 222 *ERQSLIRLGASGVPFSTDARAASTSLGSAARMFCSNSATLGE 350
Score = 153 bits (329), Expect = 1e-036
Identities = 71/90 (78%), Positives = 74/90 (82%)
Frame = -1 / +2
Query: 571 SAERQGLAVPLLEALEQRVDVLALVDGHEHLVQLLAGRPRLLAGQVLGADLLAHEPVQRV 392
SAE QG AVPL EAL+QRVDVLALV GH+HLVQLL GRP LLAGQVLGA LA E V V
Sbjct: 44 SAEWQGRAVPLFEALQQRVDVLALVHGHQHLVQLLPGRPCLLAGQVLGAAHLADELVXWV 223
Query: 391 GPALLDPVGDQRAAVLHGRARGFHLLGQRR 302
G A+LDPVG QR AVLHGRARG HLLGQRR
Sbjct: 224 GAAVLDPVGSQRRAVLHGRARGLHLLGQRR 313
Score = 104 bits (222), Expect = 6e-022
Identities = 49/72 (68%), Positives = 51/72 (70%)
Frame = +1 / -3
Query: 358 SGPQQDQGXXXXXXXXXXXXGGRHRVPDRREDEVARRGAEQGARGHQPAQAHRPAARVPQ 537
+G Q DQG G RHRVPDRRED VAR GAEQGA GH+ AQAHRPAA VPQ
Sbjct: 257 AGSQPDQGLPLLPTXPVRPRGVRHRVPDRREDTVARGGAEQGAGGHERAQAHRPAAGVPQ 78
Query: 538 GVERRAPAALLS 573
VERRAPA LLS
Sbjct: 77 RVERRAPATLLS 42
>gb|AL501962.1|AL501962 AL501962 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW06A07u 3', mRNA sequence
Length = 344
Score = 220 bits (475), Expect = 8e-057
Identities = 89/101 (88%), Positives = 96/101 (95%)
Frame = +2 / -2
Query: 272 KVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRFVREEVGTEYLTGEK 451
KVAEFEQ +RAALPKEVEAARA+VENG+PL PNRIK+CRSYPLY+FVRE GTEYLTGEK
Sbjct: 343 KVAEFEQNIRAALPKEVEAARASVENGTPLAPNRIKDCRSYPLYQFVREVCGTEYLTGEK 164
Query: 452 TRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLPLC*A 574
TRSPGEELNKVLVA+N+RKHIDPLLECLKEWNG PLPLC*A
Sbjct: 163 TRSPGEELNKVLVAMNERKHIDPLLECLKEWNGAPLPLC*A 41
Score = 186 bits (400), Expect = 2e-046
Identities = 84/101 (83%), Positives = 88/101 (87%)
Frame = -2 / +3
Query: 573 AQQSGRGSPFHSLRHSSSGSMCLRWLMATSTLFSSSPGDLVFSPVRYSVPTSSRTNRYSG 394
AQQSGRG+PFHSLRHSSSGSMCLR MATSTLFSSSPGD VFSPVRYSVP +SRTN SG
Sbjct: 42 AQQSGRGAPFHSLRHSSSGSMCLRSFMATSTLFSSSPGDRVFSPVRYSVPHTSRTNW*SG 221
Query: 393 *DRHSLILLGTRGLPFSTAARAASTSLGSAARTCCSNSATL 271
*+R SLI LG G+PFST ARAASTSLGSAAR CSNSATL
Sbjct: 222 *ERQSLIRLGASGVPFSTDARAASTSLGSAARMFCSNSATL 344
Score = 155 bits (332), Expect = 4e-037
Identities = 71/90 (78%), Positives = 75/90 (83%)
Frame = -1 / +2
Query: 571 SAERQGLAVPLLEALEQRVDVLALVDGHEHLVQLLAGRPRLLAGQVLGADLLAHEPVQRV 392
SAE QG AVPL EAL+QRVDVLALV GH+HLVQLL GRP LLAGQVLGA LA E V+ V
Sbjct: 44 SAEWQGRAVPLFEALQQRVDVLALVHGHQHLVQLLPGRPCLLAGQVLGAAHLADELVEWV 223
Query: 391 GPALLDPVGDQRAAVLHGRARGFHLLGQRR 302
G A+LDPVG QR AVLHGRARG HLLGQRR
Sbjct: 224 GAAVLDPVGSQRRAVLHGRARGLHLLGQRR 313
Score = 104 bits (222), Expect = 6e-022
Identities = 48/72 (66%), Positives = 50/72 (69%)
Frame = +1 / -1
Query: 358 SGPQQDQGXXXXXXXXXXXXGGRHRVPDRREDEVARRGAEQGARGHQPAQAHRPAARVPQ 537
+G Q DQG G RHRVPDRRED VAR GAEQGA GH+ AQAHRPAA VPQ
Sbjct: 257 AGSQPDQGLPLLPTLPVRPRGVRHRVPDRREDTVARGGAEQGAGGHERAQAHRPAAGVPQ 78
Query: 538 GVERRAPAALLS 573
VERRAPA LLS
Sbjct: 77 RVERRAPATLLS 42
>gb|BQ662656.1|BQ662656 HS03H24u HS Hordeum vulgare subsp. vulgare cDNA clone HS03H24
3-PRIME, mRNA sequence
Length = 557
Score = 220 bits (475), Expect = 8e-057
Identities = 89/101 (88%), Positives = 96/101 (95%)
Frame = +2 / -3
Query: 272 KVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRFVREEVGTEYLTGEK 451
KVAEFEQ +RAALPKEVEAARA+VENG+PL PNRIK+CRSYPLY+FVRE GTEYLTGEK
Sbjct: 555 KVAEFEQNIRAALPKEVEAARASVENGTPLAPNRIKDCRSYPLYQFVREVCGTEYLTGEK 376
Query: 452 TRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLPLC*A 574
TRSPGEELNKVLVA+N+RKHIDPLLECLKEWNG PLPLC*A
Sbjct: 375 TRSPGEELNKVLVAMNERKHIDPLLECLKEWNGAPLPLC*A 253
Score = 188 bits (404), Expect = 5e-047
Identities = 88/129 (68%), Positives = 93/129 (72%)
Frame = -2 / +2
Query: 657 FTTTLKRSVLCCYTFVFLLYTLSFSAGAAQQSGRGSPFHSLRHSSSGSMCLRWLMATSTL 478
FT C F + AQQSGRG+PFHSLRHSSSGSMCLR MATSTL
Sbjct: 170 FTVLNSSIFTLCVRVFFSFFWSYLLLSTAQQSGRGAPFHSLRHSSSGSMCLRSFMATSTL 349
Query: 477 FSSSPGDLVFSPVRYSVPTSSRTNRYSG*DRHSLILLGTRGLPFSTAARAASTSLGSAAR 298
FSSSPGD VFSPVRYSVP +SRTN SG*+R SLI LG G+PFST ARAASTSLGSAAR
Sbjct: 350 FSSSPGDRVFSPVRYSVPHTSRTNW*SG*ERQSLIRLGASGVPFSTDARAASTSLGSAAR 529
Query: 297 TCCSNSATL 271
CSNSATL
Sbjct: 530 MFCSNSATL 556
Score = 155 bits (332), Expect = 4e-037
Identities = 71/90 (78%), Positives = 75/90 (83%)
Frame = -1 / +1
Query: 571 SAERQGLAVPLLEALEQRVDVLALVDGHEHLVQLLAGRPRLLAGQVLGADLLAHEPVQRV 392
SAE QG AVPL EAL+QRVDVLALV GH+HLVQLL GRP LLAGQVLGA LA E V+ V
Sbjct: 256 SAEWQGRAVPLFEALQQRVDVLALVHGHQHLVQLLPGRPCLLAGQVLGAAHLADELVEWV 435
Query: 391 GPALLDPVGDQRAAVLHGRARGFHLLGQRR 302
G A+LDPVG QR AVLHGRARG HLLGQRR
Sbjct: 436 GAAVLDPVGSQRRAVLHGRARGLHLLGQRR 525
Score = 104 bits (222), Expect = 6e-022
Identities = 48/72 (66%), Positives = 50/72 (69%)
Frame = +1 / -2
Query: 358 SGPQQDQGXXXXXXXXXXXXGGRHRVPDRREDEVARRGAEQGARGHQPAQAHRPAARVPQ 537
+G Q DQG G RHRVPDRRED VAR GAEQGA GH+ AQAHRPAA VPQ
Sbjct: 469 AGSQPDQGLPLLPTLPVRPRGVRHRVPDRREDTVARGGAEQGAGGHERAQAHRPAAGVPQ 290
Query: 538 GVERRAPAALLS 573
VERRAPA LLS
Sbjct: 289 RVERRAPATLLS 254
>gb|BJ468382.1|BJ468382 BJ468382 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags38i22 3', mRNA sequence
Length = 602
Score = 213 bits (460), Expect(2) = 2e-056
Identities = 88/123 (71%), Positives = 105/123 (85%)
Frame = +2 / -1
Query: 230 NGDAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRF 409
NG+AER+V+TS+F KVA+FEQ++ A LP+EVEAAR AVENG+ PNRI +CRSYPLYRF
Sbjct: 566 NGEAERNVETSVFGKVAKFEQELCATLPQEVEAARGAVENGTAAEPNRIVDCRSYPLYRF 387
Query: 410 VREEVGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLPLC*AAPAEK 589
VREE+GT YLTGEKTRSPGEE++KV VA+NQ KHID LLECLKEWNGEPLP+ *+ +
Sbjct: 386 VREELGTVYLTGEKTRSPGEEVDKVFVAMNQGKHIDALLECLKEWNGEPLPIS*SMR*RE 207
Query: 590 DNV 598
D V
Sbjct: 206 DAV 198
Score = 177 bits (382), Expect = 5e-044
Identities = 77/113 (68%), Positives = 88/113 (77%)
Frame = -2 / +1
Query: 561 GRGSPFHSLRHSSSGSMCLRWLMATSTLFSSSPGDLVFSPVRYSVPTSSRTNRYSG*DRH 382
GRGSPFHSLRHSSS SMCL W MAT+TL +SSPGD VFSPV+Y+VP+SSRTNRY G DR
Sbjct: 235 GRGSPFHSLRHSSSASMCLPWFMATNTLSTSSPGDRVFSPVKYTVPSSSRTNRYRGYDRQ 414
Query: 381 SLILLGTRGLPFSTAARAASTSLGSAARTCCSNSATLAKMDVSTSRSASPFGQ 223
S I G+ +PFSTA AASTS GS A++ CSN ATL +VST RSASP +
Sbjct: 415 STIRFGSAAVPFSTAPLAASTS*GSVAQSSCSNLATLPNTEVSTLRSASPLAR 573
Score = 111 bits (238), Expect = 4e-024
Identities = 52/85 (61%), Positives = 63/85 (74%)
Frame = -1 / +3
Query: 568 AERQGLAVPLLEALEQRVDVLALVDGHEHLVQLLAGRPRLLAGQVLGADLLAHEPVQRVG 389
A+R+GLAVPLLEAL+QR+DVL LV G+EH V LLAG P LL+GQV A LLAH+PVQRV
Sbjct: 228 ADREGLAVPLLEALQQRIDVLTLVHGNEHFVHLLAG*PSLLSGQVHRAQLLAHKPVQRV* 407
Query: 388 PALLDPVGDQRAAVLHGRARGFHLL 314
PA+ D V A+LH + +LL
Sbjct: 408 PAVYDTVWFCGGAILHCTSSSLNLL 482
Score = 25.8 bits (50), Expect(2) = 2e-056
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = +1 / -1
Query: 193 KXRAVLVEHALA 228
K RAVLVEHALA
Sbjct: 602 KMRAVLVEHALA 567
>gb|BJ466939.1|BJ466939 BJ466939 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags35c02 3', mRNA sequence
Length = 575
Score = 215 bits (463), Expect = 4e-055
Identities = 87/110 (79%), Positives = 99/110 (90%)
Frame = +2 / -3
Query: 242 ERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRFVREE 421
E DV+TS+FAK+A FEQ+VRA LPKEVEAAR+AVENG+ NRI ECRSYPLYRFVR+E
Sbjct: 573 EHDVETSVFAKLATFEQEVRAVLPKEVEAARSAVENGTAAQQNRITECRSYPLYRFVRKE 394
Query: 422 VGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLPLC* 571
+GTEYLTGEKTRSPGEE++KV VA+NQ KHID LLECLKEWNGEPLP+C*
Sbjct: 393 LGTEYLTGEKTRSPGEEVDKVFVAMNQGKHIDALLECLKEWNGEPLPIC* 244
Score = 180 bits (388), Expect = 8e-045
Identities = 81/117 (69%), Positives = 89/117 (76%)
Frame = -2 / +2
Query: 591 SFSAGAAQQSGRGSPFHSLRHSSSGSMCLRWLMATSTLFSSSPGDLVFSPVRYSVPTSSR 412
S S + QQ GRGSPFHSLRHS S SMCL W MAT+TL +SSPGDLVFSPV+YSVP+S R
Sbjct: 224 SISQSSVQQIGRGSPFHSLRHSRSASMCLPWFMATNTLSTSSPGDLVFSPVKYSVPSSLR 403
Query: 411 TNRYSG*DRHSLILLGTRGLPFSTAARAASTSLGSAARTCCSNSATLAKMDVSTSRS 241
TNR SG DRHS+I +PFSTA AASTS GS ART CSN A+LA DVSTS S
Sbjct: 404 TNR*SGYDRHSVIRFCCAAVPFSTALLAASTSFGSTARTSCSNVASLANTDVSTSCS 574
Score = 111 bits (236), Expect = 7e-024
Identities = 53/88 (60%), Positives = 62/88 (70%)
Frame = -1 / +1
Query: 571 SAERQGLAVPLLEALEQRVDVLALVDGHEHLVQLLAGRPRLLAGQVLGADLLAHEPVQRV 392
SA RQGL +PLLEAL++ VDVLALV G+EHLV RPRLL+ QVL + LLAHEPV+RV
Sbjct: 244 SANRQGLTIPLLEALKKCVDVLALVHGNEHLVHFFPRRPRLLSSQVLCSKLLAHEPVERV 423
Query: 391 GPALLDPVGDQRAAVLHGRARGFHLLGQ 308
PA D V +A+LHG G LL Q
Sbjct: 424 RPAFRDTVLLCGSAILHGAPGGLDLLWQ 507
>gb|BQ468898.1|BQ468898 HM02L09r HM Hordeum vulgare subsp. vulgare cDNA clone HM02L09
5-PRIME, mRNA sequence
Length = 579
Score = 215 bits (463), Expect = 4e-055
Identities = 87/110 (79%), Positives = 99/110 (90%)
Frame = +2 / +1
Query: 242 ERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRFVREE 421
E DV+TS+FAK+A FEQ+VRA LPKEVEAAR+AVENG+ NRI ECRSYPLYRFVR+E
Sbjct: 1 EHDVETSVFAKLATFEQEVRAVLPKEVEAARSAVENGTAAQQNRITECRSYPLYRFVRKE 180
Query: 422 VGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLPLC* 571
+GTEYLTGEKTRSPGEE++KV VA+NQ KHID LLECLKEWNGEPLP+C*
Sbjct: 181 LGTEYLTGEKTRSPGEEVDKVFVAMNQGKHIDALLECLKEWNGEPLPIC* 330
Score = 180 bits (387), Expect = 1e-044
Identities = 80/115 (69%), Positives = 88/115 (76%)
Frame = -2 / -2
Query: 591 SFSAGAAQQSGRGSPFHSLRHSSSGSMCLRWLMATSTLFSSSPGDLVFSPVRYSVPTSSR 412
S S + QQ GRGSPFHSLRHS S SMCL W MAT+TL +SSPGDLVFSPV+YSVP+S R
Sbjct: 350 SISQSSVQQIGRGSPFHSLRHSRSASMCLPWFMATNTLSTSSPGDLVFSPVKYSVPSSLR 171
Query: 411 TNRYSG*DRHSLILLGTRGLPFSTAARAASTSLGSAARTCCSNSATLAKMDVSTS 247
TNR SG DRHS+I +PFSTA AASTS GS ART CSN A+LA DVSTS
Sbjct: 170 TNR*SGYDRHSVIRFCCAAVPFSTALLAASTSFGSTARTSCSNVASLANTDVSTS 6
Score = 111 bits (236), Expect = 7e-024
Identities = 53/88 (60%), Positives = 62/88 (70%)
Frame = -1 / -1
Query: 571 SAERQGLAVPLLEALEQRVDVLALVDGHEHLVQLLAGRPRLLAGQVLGADLLAHEPVQRV 392
SA RQGL +PLLEAL++ VDVLALV G+EHLV RPRLL+ QVL + LLAHEPV+RV
Sbjct: 330 SANRQGLTIPLLEALKKCVDVLALVHGNEHLVHFFPRRPRLLSSQVLCSKLLAHEPVERV 151
Query: 391 GPALLDPVGDQRAAVLHGRARGFHLLGQ 308
PA D V +A+LHG G LL Q
Sbjct: 150 RPAFRDTVLLCGSAILHGAPGGLDLLWQ 67
>gb|AV919053.1|AV919053 AV919053 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags4d18 3', mRNA sequence
Length = 717
Score = 203 bits (437), Expect(2) = 4e-055
Identities = 82/103 (79%), Positives = 93/103 (90%)
Frame = +2 / -3
Query: 263 IFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRFVREEVGTEYLT 442
+FAK+A FEQ+VRA LPKEVEAAR+AVENG+ NRI ECRSYPLYRFVR+E+GTEYLT
Sbjct: 538 VFAKLATFEQEVRAVLPKEVEAARSAVENGTAAQQNRITECRSYPLYRFVRKELGTEYLT 359
Query: 443 GEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLPLC* 571
GEKTRSPGEE++KV VA+NQ KHID LLECLKEWNGEPLP+C*
Sbjct: 358 GEKTRSPGEEVDKVFVAMNQGKHIDALLECLKEWNGEPLPIC* 230
Score = 170 bits (365), Expect(3) = 3e-044
Identities = 75/108 (69%), Positives = 83/108 (76%)
Frame = -2 / +3
Query: 591 SFSAGAAQQSGRGSPFHSLRHSSSGSMCLRWLMATSTLFSSSPGDLVFSPVRYSVPTSSR 412
S S + QQ GRGSPFHSLRHS S SMCL W MAT+TL +SSPGDLVFSPV+YSVP+S R
Sbjct: 210 SISQSSVQQIGRGSPFHSLRHSRSASMCLPWFMATNTLSTSSPGDLVFSPVKYSVPSSLR 389
Query: 411 TNRYSG*DRHSLILLGTRGLPFSTAARAASTSLGSAARTCCSNSATLA 268
TNR SG DRHS+I +PFSTA AASTS GS ART CSN A+LA
Sbjct: 390 TNR*SGYDRHSVIRFCCAAVPFSTALLAASTSFGSTARTSCSNVASLA 533
Score = 111 bits (236), Expect = 7e-024
Identities = 53/88 (60%), Positives = 62/88 (70%)
Frame = -1 / +2
Query: 571 SAERQGLAVPLLEALEQRVDVLALVDGHEHLVQLLAGRPRLLAGQVLGADLLAHEPVQRV 392
SA RQGL +PLLEAL++ VDVLALV G+EHLV RPRLL+ QVL + LLAHEPV+RV
Sbjct: 230 SANRQGLTIPLLEALKKCVDVLALVHGNEHLVHFFPRRPRLLSSQVLCSKLLAHEPVERV 409
Query: 391 GPALLDPVGDQRAAVLHGRARGFHLLGQ 308
PA D V +A+LHG G LL Q
Sbjct: 410 RPAFRDTVLLCGSAILHGAPGGLDLLWQ 493
Score = 32.2 bits (64), Expect(2) = 4e-055
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +1 / -2
Query: 184 LMQKXRAVLVEHALA 228
LMQK RAVLVEHALA
Sbjct: 617 LMQKMRAVLVEHALA 573
Score = 24.9 bits (48), Expect(3) = 3e-044
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -1 / +3
Query: 163 GSSAYXNTASRS 128
G SAY NTASRS
Sbjct: 639 GHSAYANTASRS 674
Score = 22.1 bits (42), Expect(3) = 3e-044
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = -2 / +1
Query: 264 MDVSTSRSASPFGQ 223
+DVSTS SASP +
Sbjct: 538 LDVSTSCSASPLAK 579
>gb|CB858981.1|CB858981 HI08O15w HI Hordeum vulgare subsp. vulgare cDNA clone HI08O15
3-PRIME, mRNA sequence
Length = 572
Score = 212 bits (457), Expect = 2e-054
Identities = 85/97 (87%), Positives = 92/97 (94%)
Frame = +2 / -3
Query: 284 FEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRFVREEVGTEYLTGEKTRSP 463
FEQ +RAALPKEVEAARA+VENG+PL PNRIK+CRSYPLY+FVRE GTEYLTGEKTRSP
Sbjct: 570 FEQNIRAALPKEVEAARASVENGTPLAPNRIKDCRSYPLYQFVREVCGTEYLTGEKTRSP 391
Query: 464 GEELNKVLVAINQRKHIDPLLECLKEWNGEPLPLC*A 574
GEELNKVLVA+N+RKHIDPLLECLKEWNG PLPLC*A
Sbjct: 390 GEELNKVLVAMNERKHIDPLLECLKEWNGAPLPLC*A 280
Score = 180 bits (387), Expect(2) = 1e-045
Identities = 84/125 (67%), Positives = 89/125 (71%)
Frame = -2 / +2
Query: 657 FTTTLKRSVLCCYTFVFLLYTLSFSAGAAQQSGRGSPFHSLRHSSSGSMCLRWLMATSTL 478
FT C F + AQQSGRG+PFHSLRHSSSGSMCLR MATSTL
Sbjct: 197 FTVLNSSIFTLCVRVFFSFFWSYLLLSTAQQSGRGAPFHSLRHSSSGSMCLRSFMATSTL 376
Query: 477 FSSSPGDLVFSPVRYSVPTSSRTNRYSG*DRHSLILLGTRGLPFSTAARAASTSLGSAAR 298
FSSSPGD VFSPVRYSVP +SRTN SG*+R SLI LG G+PFST ARAASTSLGSAAR
Sbjct: 377 FSSSPGDRVFSPVRYSVPHTSRTNW*SG*ERQSLIRLGASGVPFSTDARAASTSLGSAAR 556
Query: 297 TCCSN 283
CSN
Sbjct: 557 MFCSN 571
Score = 155 bits (332), Expect = 4e-037
Identities = 71/90 (78%), Positives = 75/90 (83%)
Frame = -1 / +1
Query: 571 SAERQGLAVPLLEALEQRVDVLALVDGHEHLVQLLAGRPRLLAGQVLGADLLAHEPVQRV 392
SAE QG AVPL EAL+QRVDVLALV GH+HLVQLL GRP LLAGQVLGA LA E V+ V
Sbjct: 283 SAEWQGRAVPLFEALQQRVDVLALVHGHQHLVQLLPGRPCLLAGQVLGAAHLADELVEWV 462
Query: 391 GPALLDPVGDQRAAVLHGRARGFHLLGQRR 302
G A+LDPVG QR AVLHGRARG HLLGQRR
Sbjct: 463 GAAVLDPVGSQRRAVLHGRARGLHLLGQRR 552
Score = 104 bits (222), Expect = 6e-022
Identities = 48/72 (66%), Positives = 50/72 (69%)
Frame = +1 / -2
Query: 358 SGPQQDQGXXXXXXXXXXXXGGRHRVPDRREDEVARRGAEQGARGHQPAQAHRPAARVPQ 537
+G Q DQG G RHRVPDRRED VAR GAEQGA GH+ AQAHRPAA VPQ
Sbjct: 496 AGSQPDQGLPLLPTLPVRPRGVRHRVPDRREDTVARGGAEQGAGGHERAQAHRPAAGVPQ 317
Query: 538 GVERRAPAALLS 573
VERRAPA LLS
Sbjct: 316 RVERRAPATLLS 281
Score = 23.1 bits (44), Expect(2) = 1e-045
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -3 / +3
Query: 764 HGVAAAGTQQHSHEL 720
HG+AAA QQ H+L
Sbjct: 114 HGMAAAEKQQQ*HQL 158
>emb|Z49146.1|HVPAL3MR H.vulgare partial PAL mRNA for phenylalanine ammonia-lyase (1831 bp)
Length = 1831
Score = 176 bits (378), Expect(3) = 5e-054
Identities = 68/111 (61%), Positives = 89/111 (80%)
Frame = +2 / +3
Query: 233 GDAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRFV 412
G E + + ++F+K+ +FE+++R+ALP+E+EAAR A ENG+ +PN IKE RS+PLYRFV
Sbjct: 1155 GPGEAESEATVFSKINKFEEELRSALPREIEAARVAFENGTAPIPNLIKESRSFPLYRFV 1334
Query: 413 REEVGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLPL 565
REE+G YLTGEK SPGEE KV + I+Q K IDP+LECLKEWNGEPLP+
Sbjct: 1335 REELGCVYLTGEKLLSPGEECTKVFLGISQNKLIDPMLECLKEWNGEPLPI 1487
Score = 139 bits (298), Expect(2) = 7e-038
Identities = 67/110 (60%), Positives = 71/110 (64%)
Frame = -2 / -1
Query: 561 GRGSPFHSLRHSSSGSMCLRWLMATSTLFSSSPGDLVFSPVRYSVPTSSRTNRYSG*DRH 382
GRGSPFHSLRHSS GSM L WLM TL SSPGD FSPVRY+ P+SSRT RYSG D
Sbjct: 1483 GRGSPFHSLRHSSMGSMSLFWLMPRKTLVHSSPGDSSFSPVRYTQPSSSRTKRYSGNDLL 1304
Query: 381 SLILLGTRGLPFSTAARAASTSLGSAARTCCSNSATLAKMDVSTSRSASP 232
SLI LG +PFS A RAAS S G A R+ SN L S S S P
Sbjct: 1303 SLIRLGMGAVPFSKATRAASISRGRADRSSSSNLLILENTVASLSASPGP 1154
Score = 104 bits (222), Expect(2) = 5e-023
Identities = 54/91 (59%), Positives = 58/91 (63%)
Frame = -1 / -3
Query: 574 SSAERQGLAVPLLEALEQRVDVLALVDGHEHLVQLLAGRPRLLAGQVLGADLLAHEPVQR 395
S + QGLAVPLLEALE VD L L D E L LAG +LLAG+V A+LLA E VQR
Sbjct: 1496 SDVDGQGLAVPLLEALEHGVDELVLADAEEDLGAFLAGGQQLLAGEVHAAELLADEAVQR 1317
Query: 394 VGPALLDPVGDQRAAVLHGRARGFHLLGQRR 302
PALLD VGD R AVL G A G L Q R
Sbjct: 1316 ERPALLDQVGDGRRAVLEGHAGGLDLPRQGR 1224
Score = 39.6 bits (80), Expect(3) = 5e-054
Identities = 18/45 (40%), Positives = 21/45 (46%)
Frame = +3 / +3
Query: 36 VTQVAKKSLSLNXXXXXXXXXXXXXXXXXXXXXEAVFXYADDPCS 170
VTQV+KK L++N EAVF YADD CS
Sbjct: 960 VTQVSKKVLTMNPTGDLSSARFSEKSLITAIDREAVFSYADDACS 1094
Score = 38.2 bits (77), Expect(2) = 7e-038
Identities = 18/45 (40%), Positives = 25/45 (55%)
Frame = -1 / -1
Query: 169 LHGSSAYXNTASRSDRRLQVLLAEARVVEPPLAFRLRDFLATCVT 35
LH SSA NTASRS +++ + + P+ F + F TCVT
Sbjct: 1093 LHASSA*LNTASRSMAVMRLFSLKRALERSPVGFMVSTFFDTCVT 959
Score = 34.5 bits (69), Expect(3) = 5e-054
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +1 / +3
Query: 175 NYALMQKXRAVLVEHAL 225
NY LMQK RAVLV+HAL
Sbjct: 1098 NYPLMQKLRAVLVDHAL 1148
Score = 26.7 bits (52), Expect(2) = 5e-023
Identities = 15/47 (31%), Positives = 17/47 (36%)
Frame = -3 / -3
Query: 176 LGAAXXXXXRKHRLAVXXXXXXXXXXXXXXXXXXGVQAQGLLGHLRH 36
+GAA +H LAV V Q LL HLRH
Sbjct: 1100 VGAACVVGVAEHGLAVDGGDEALLAEARAGEVAGRVHGQHLLRHLRH 960
>gb|BF265916.1|BF265916 HV_CEa0013K19f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0013K19f, mRNA sequence
Length = 773
Score = 176 bits (378), Expect(3) = 5e-054
Identities = 68/111 (61%), Positives = 89/111 (80%)
Frame = +2 / +1
Query: 233 GDAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRFV 412
G E + + ++F+K+ +FE+++R+ALP+E+EAAR A ENG+ +PN IKE RS+PLYRFV
Sbjct: 286 GPGEAESEATVFSKINKFEEELRSALPREIEAARVAFENGTAPIPNLIKESRSFPLYRFV 465
Query: 413 REEVGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLPL 565
REE+G YLTGEK SPGEE KV + I+Q K IDP+LECLKEWNGEPLP+
Sbjct: 466 REELGCVYLTGEKLLSPGEECTKVFLGISQNKLIDPMLECLKEWNGEPLPI 618
Score = 139 bits (298), Expect(2) = 7e-038
Identities = 67/110 (60%), Positives = 71/110 (64%)
Frame = -2 / -1
Query: 561 GRGSPFHSLRHSSSGSMCLRWLMATSTLFSSSPGDLVFSPVRYSVPTSSRTNRYSG*DRH 382
GRGSPFHSLRHSS GSM L WLM TL SSPGD FSPVRY+ P+SSRT RYSG D
Sbjct: 614 GRGSPFHSLRHSSMGSMSLFWLMPRKTLVHSSPGDSSFSPVRYTQPSSSRTKRYSGNDLL 435
Query: 381 SLILLGTRGLPFSTAARAASTSLGSAARTCCSNSATLAKMDVSTSRSASP 232
SLI LG +PFS A RAAS S G A R+ SN L S S S P
Sbjct: 434 SLIRLGMGAVPFSKATRAASISRGRADRSSSSNLLILENTVASLSASPGP 285
Score = 104 bits (222), Expect(2) = 2e-023
Identities = 54/91 (59%), Positives = 58/91 (63%)
Frame = -1 / -3
Query: 574 SSAERQGLAVPLLEALEQRVDVLALVDGHEHLVQLLAGRPRLLAGQVLGADLLAHEPVQR 395
S + QGLAVPLLEALE VD L L D E L LAG +LLAG+V A+LLA E VQR
Sbjct: 627 SDVDGQGLAVPLLEALEHGVDELVLADAEEDLGAFLAGGQQLLAGEVHAAELLADEAVQR 448
Query: 394 VGPALLDPVGDQRAAVLHGRARGFHLLGQRR 302
PALLD VGD R AVL G A G L Q R
Sbjct: 447 ERPALLDQVGDGRRAVLEGHAGGLDLPRQGR 355
Score = 39.6 bits (80), Expect(3) = 5e-054
Identities = 18/45 (40%), Positives = 21/45 (46%)
Frame = +3 / +1
Query: 36 VTQVAKKSLSLNXXXXXXXXXXXXXXXXXXXXXEAVFXYADDPCS 170
VTQV+KK L++N EAVF YADD CS
Sbjct: 91 VTQVSKKVLTMNPTGDLSSARFSEKSLITAIDREAVFSYADDACS 225
Score = 38.2 bits (77), Expect(2) = 7e-038
Identities = 18/45 (40%), Positives = 25/45 (55%)
Frame = -1 / -1
Query: 169 LHGSSAYXNTASRSDRRLQVLLAEARVVEPPLAFRLRDFLATCVT 35
LH SSA NTASRS +++ + + P+ F + F TCVT
Sbjct: 224 LHASSA*LNTASRSMAVMRLFSLKRALERSPVGFMVSTFFDTCVT 90
Score = 34.5 bits (69), Expect(3) = 5e-054
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +1 / +1
Query: 175 NYALMQKXRAVLVEHAL 225
NY LMQK RAVLV+HAL
Sbjct: 229 NYPLMQKLRAVLVDHAL 279
Score = 26.7 bits (52), Expect(2) = 2e-023
Identities = 15/47 (31%), Positives = 17/47 (36%)
Frame = -3 / -3
Query: 176 LGAAXXXXXRKHRLAVXXXXXXXXXXXXXXXXXXGVQAQGLLGHLRH 36
+GAA +H LAV V Q LL HLRH
Sbjct: 231 VGAACVVGVAEHGLAVDGGDEALLAEARAGEVAGRVHGQHLLRHLRH 91
>gb|BQ765924.1|BQ765924 EBro03_SQ008_E16_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ008_E16 5', mRNA sequence
Length = 625
Score = 176 bits (378), Expect(3) = 5e-054
Identities = 68/111 (61%), Positives = 89/111 (80%)
Frame = +2 / +2
Query: 233 GDAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRFV 412
G E + + ++F+K+ +FE+++R+ALP+E+EAAR A ENG+ +PN IKE RS+PLYRFV
Sbjct: 263 GPGEAESEATVFSKINKFEEELRSALPREIEAARVAFENGTAPIPNLIKESRSFPLYRFV 442
Query: 413 REEVGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLPL 565
REE+G YLTGEK SPGEE KV + I+Q K IDP+LECLKEWNGEPLP+
Sbjct: 443 REELGCVYLTGEKLLSPGEECTKVFLGISQNKLIDPMLECLKEWNGEPLPI 595
Score = 139 bits (298), Expect(2) = 7e-038
Identities = 67/110 (60%), Positives = 71/110 (64%)
Frame = -2 / -2
Query: 561 GRGSPFHSLRHSSSGSMCLRWLMATSTLFSSSPGDLVFSPVRYSVPTSSRTNRYSG*DRH 382
GRGSPFHSLRHSS GSM L WLM TL SSPGD FSPVRY+ P+SSRT RYSG D
Sbjct: 591 GRGSPFHSLRHSSMGSMSLFWLMPRKTLVHSSPGDSSFSPVRYTQPSSSRTKRYSGNDLL 412
Query: 381 SLILLGTRGLPFSTAARAASTSLGSAARTCCSNSATLAKMDVSTSRSASP 232
SLI LG +PFS A RAAS S G A R+ SN L S S S P
Sbjct: 411 SLIRLGMGAVPFSKATRAASISRGRADRSSSSNLLILENTVASLSASPGP 262
Score = 104 bits (222), Expect(2) = 2e-023
Identities = 54/91 (59%), Positives = 58/91 (63%)
Frame = -1 / -1
Query: 574 SSAERQGLAVPLLEALEQRVDVLALVDGHEHLVQLLAGRPRLLAGQVLGADLLAHEPVQR 395
S + QGLAVPLLEALE VD L L D E L LAG +LLAG+V A+LLA E VQR
Sbjct: 604 SDVDGQGLAVPLLEALEHGVDELVLADAEEDLGAFLAGGQQLLAGEVHAAELLADEAVQR 425
Query: 394 VGPALLDPVGDQRAAVLHGRARGFHLLGQRR 302
PALLD VGD R AVL G A G L Q R
Sbjct: 424 ERPALLDQVGDGRRAVLEGHAGGLDLPRQGR 332
Score = 39.6 bits (80), Expect(3) = 5e-054
Identities = 18/45 (40%), Positives = 21/45 (46%)
Frame = +3 / +2
Query: 36 VTQVAKKSLSLNXXXXXXXXXXXXXXXXXXXXXEAVFXYADDPCS 170
VTQV+KK L++N EAVF YADD CS
Sbjct: 68 VTQVSKKVLTMNPTGDLSSARFSEKSLITAIDREAVFSYADDACS 202
Score = 38.2 bits (77), Expect(2) = 7e-038
Identities = 18/45 (40%), Positives = 25/45 (55%)
Frame = -1 / -2
Query: 169 LHGSSAYXNTASRSDRRLQVLLAEARVVEPPLAFRLRDFLATCVT 35
LH SSA NTASRS +++ + + P+ F + F TCVT
Sbjct: 201 LHASSA*LNTASRSMAVMRLFSLKRALERSPVGFMVSTFFDTCVT 67
Score = 34.5 bits (69), Expect(3) = 5e-054
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +1 / +2
Query: 175 NYALMQKXRAVLVEHAL 225
NY LMQK RAVLV+HAL
Sbjct: 206 NYPLMQKLRAVLVDHAL 256
Score = 26.7 bits (52), Expect(2) = 2e-023
Identities = 15/47 (31%), Positives = 17/47 (36%)
Frame = -3 / -1
Query: 176 LGAAXXXXXRKHRLAVXXXXXXXXXXXXXXXXXXGVQAQGLLGHLRH 36
+GAA +H LAV V Q LL HLRH
Sbjct: 208 VGAACVVGVAEHGLAVDGGDEALLAEARAGEVAGRVHGQHLLRHLRH 68
>gb|BQ763878.1|BQ763878 EBro03_SQ005_L15_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ005_L15 5', mRNA sequence
Length = 615
Score = 176 bits (378), Expect(3) = 5e-054
Identities = 68/111 (61%), Positives = 89/111 (80%)
Frame = +2 / +2
Query: 233 GDAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRFV 412
G E + + ++F+K+ +FE+++R+ALP+E+EAAR A ENG+ +PN IKE RS+PLYRFV
Sbjct: 251 GPGEAESEATVFSKINKFEEELRSALPREIEAARVAFENGTAPIPNLIKESRSFPLYRFV 430
Query: 413 REEVGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLPL 565
REE+G YLTGEK SPGEE KV + I+Q K IDP+LECLKEWNGEPLP+
Sbjct: 431 REELGCVYLTGEKLLSPGEECTKVFLGISQNKLIDPMLECLKEWNGEPLPI 583
Score = 139 bits (298), Expect(2) = 7e-038
Identities = 67/110 (60%), Positives = 71/110 (64%)
Frame = -2 / -1
Query: 561 GRGSPFHSLRHSSSGSMCLRWLMATSTLFSSSPGDLVFSPVRYSVPTSSRTNRYSG*DRH 382
GRGSPFHSLRHSS GSM L WLM TL SSPGD FSPVRY+ P+SSRT RYSG D
Sbjct: 579 GRGSPFHSLRHSSMGSMSLFWLMPRKTLVHSSPGDSSFSPVRYTQPSSSRTKRYSGNDLL 400
Query: 381 SLILLGTRGLPFSTAARAASTSLGSAARTCCSNSATLAKMDVSTSRSASP 232
SLI LG +PFS A RAAS S G A R+ SN L S S S P
Sbjct: 399 SLIRLGMGAVPFSKATRAASISRGRADRSSSSNLLILENTVASLSASPGP 250
Score = 104 bits (222), Expect(2) = 2e-023
Identities = 54/91 (59%), Positives = 58/91 (63%)
Frame = -1 / -3
Query: 574 SSAERQGLAVPLLEALEQRVDVLALVDGHEHLVQLLAGRPRLLAGQVLGADLLAHEPVQR 395
S + QGLAVPLLEALE VD L L D E L LAG +LLAG+V A+LLA E VQR
Sbjct: 592 SDVDGQGLAVPLLEALEHGVDELVLADAEEDLGAFLAGGQQLLAGEVHAAELLADEAVQR 413
Query: 394 VGPALLDPVGDQRAAVLHGRARGFHLLGQRR 302
PALLD VGD R AVL G A G L Q R
Sbjct: 412 ERPALLDQVGDGRRAVLEGHAGGLDLPRQGR 320
Score = 39.6 bits (80), Expect(3) = 5e-054
Identities = 18/45 (40%), Positives = 21/45 (46%)
Frame = +3 / +2
Query: 36 VTQVAKKSLSLNXXXXXXXXXXXXXXXXXXXXXEAVFXYADDPCS 170
VTQV+KK L++N EAVF YADD CS
Sbjct: 56 VTQVSKKVLTMNPTGDLSSARFSEKSLITAIDREAVFSYADDACS 190
Score = 38.2 bits (77), Expect(2) = 7e-038
Identities = 18/45 (40%), Positives = 25/45 (55%)
Frame = -1 / -1
Query: 169 LHGSSAYXNTASRSDRRLQVLLAEARVVEPPLAFRLRDFLATCVT 35
LH SSA NTASRS +++ + + P+ F + F TCVT
Sbjct: 189 LHASSA*LNTASRSMAVMRLFSLKRALERSPVGFMVSTFFDTCVT 55
Score = 34.5 bits (69), Expect(3) = 5e-054
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +1 / +2
Query: 175 NYALMQKXRAVLVEHAL 225
NY LMQK RAVLV+HAL
Sbjct: 194 NYPLMQKLRAVLVDHAL 244
Score = 26.7 bits (52), Expect(2) = 2e-023
Identities = 15/47 (31%), Positives = 17/47 (36%)
Frame = -3 / -3
Query: 176 LGAAXXXXXRKHRLAVXXXXXXXXXXXXXXXXXXGVQAQGLLGHLRH 36
+GAA +H LAV V Q LL HLRH
Sbjct: 196 VGAACVVGVAEHGLAVDGGDEALLAEARAGEVAGRVHGQHLLRHLRH 56
>gb|AV921618.1|AV921618 AV921618 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags12a21 3', mRNA sequence
Length = 548
Score = 210 bits (454), Expect = 6e-054
Identities = 85/115 (73%), Positives = 100/115 (86%)
Frame = +2 / -3
Query: 248 DVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRFVREEVG 427
+V+TS+FAK+A FEQ++RA LPKEVEAAR+AVENG+ NRI ECRSYPLYRFVR+E+G
Sbjct: 534 NVETSVFAKLATFEQELRAVLPKEVEAARSAVENGTAAQQNRISECRSYPLYRFVRKELG 355
Query: 428 TEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLPLC*AAPAEKD 592
TEYLTGEKTRSPGEE++KV VA+NQ KHID LLECLKEWNGEPLP+C* E +
Sbjct: 354 TEYLTGEKTRSPGEEVDKVFVAMNQGKHIDALLECLKEWNGEPLPIC*TEDPEME 190
Score = 170 bits (366), Expect = 8e-042
Identities = 76/114 (66%), Positives = 84/114 (73%)
Frame = -2 / +2
Query: 591 SFSAGAAQQSGRGSPFHSLRHSSSGSMCLRWLMATSTLFSSSPGDLVFSPVRYSVPTSSR 412
S S + QQ GRGSPFHS RHS S SMCL W MAT+TL +SSPGD VFSPV+YSVP+S R
Sbjct: 191 SISGSSVQQIGRGSPFHSFRHSRSASMCLPWFMATNTLSTSSPGDRVFSPVKYSVPSSLR 370
Query: 411 TNRYSG*DRHSLILLGTRGLPFSTAARAASTSLGSAARTCCSNSATLAKMDVST 250
TNR SG DRHS I +PFSTA AASTS GS AR+ CSN A+LA DVST
Sbjct: 371 TNR*SGYDRHSEIRFCCAAVPFSTALLAASTSFGSTARSSCSNVASLANTDVST 532
Score = 112 bits (240), Expect = 2e-024
Identities = 53/88 (60%), Positives = 63/88 (71%)
Frame = -1 / +1
Query: 571 SAERQGLAVPLLEALEQRVDVLALVDGHEHLVQLLAGRPRLLAGQVLGADLLAHEPVQRV 392
SA+RQGL +PLL+AL++RVDVLALV G+EHLV L RPRLL QVL + LLAHEPV+RV
Sbjct: 211 SADRQGLTIPLLQALKERVDVLALVHGNEHLVHLFPRRPRLLPSQVLRSKLLAHEPVERV 390
Query: 391 GPALLDPVGDQRAAVLHGRARGFHLLGQ 308
P D V +A+LHG G LL Q
Sbjct: 391 RPTFGDTVLLCCSAILHGAPGGLDLLWQ 474
>gb|AV928881.1|AV928881 AV928881 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd20a21 3', mRNA sequence
Length = 538
Score = 208 bits (449), Expect = 3e-053
Identities = 84/113 (74%), Positives = 98/113 (86%)
Frame = +2 / -1
Query: 254 DTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRFVREEVGTE 433
+TS+FAK+A FEQ++RA LPKEVEAAR+AVENG+ NRI ECRSYPLYRFVR+E+GTE
Sbjct: 538 ETSVFAKLATFEQELRAVLPKEVEAARSAVENGTAAQQNRISECRSYPLYRFVRKELGTE 359
Query: 434 YLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLPLC*AAPAEKD 592
YLTGEKTRSPGEE++KV VA+NQ KHID LLECLKEWNGEPLP+C* E +
Sbjct: 358 YLTGEKTRSPGEEVDKVFVAMNQGKHIDALLECLKEWNGEPLPIC*TEDPEME 200
Score = 166 bits (357), Expect = 1e-040
Identities = 74/112 (66%), Positives = 82/112 (73%)
Frame = -2 / +3
Query: 591 SFSAGAAQQSGRGSPFHSLRHSSSGSMCLRWLMATSTLFSSSPGDLVFSPVRYSVPTSSR 412
S S + QQ GRGSPFHS RHS S SMCL W MAT+TL +SSPGD VFSPV+YSVP+S R
Sbjct: 201 SISGSSVQQIGRGSPFHSFRHSRSASMCLPWFMATNTLSTSSPGDRVFSPVKYSVPSSLR 380
Query: 411 TNRYSG*DRHSLILLGTRGLPFSTAARAASTSLGSAARTCCSNSATLAKMDV 256
TNR SG DRHS I +PFSTA AASTS GS AR+ CSN A+LA DV
Sbjct: 381 TNR*SGYDRHSEIRFCCAAVPFSTALLAASTSFGSTARSSCSNVASLANTDV 536
Score = 112 bits (240), Expect = 2e-024
Identities = 53/88 (60%), Positives = 63/88 (71%)
Frame = -1 / +2
Query: 571 SAERQGLAVPLLEALEQRVDVLALVDGHEHLVQLLAGRPRLLAGQVLGADLLAHEPVQRV 392
SA+RQGL +PLL+AL++RVDVLALV G+EHLV L RPRLL QVL + LLAHEPV+RV
Sbjct: 221 SADRQGLTIPLLQALKERVDVLALVHGNEHLVHLFPRRPRLLPSQVLRSKLLAHEPVERV 400
Query: 391 GPALLDPVGDQRAAVLHGRARGFHLLGQ 308
P D V +A+LHG G LL Q
Sbjct: 401 RPTFGDTVLLCCSAILHGAPGGLXLLWQ 484
>gb|BU968202.1|BU968202 HB06L24r BC Hordeum vulgare subsp. vulgare cDNA clone HB06L24
5-PRIME, mRNA sequence
Length = 402
Score = 208 bits (448), Expect = 4e-053
Identities = 84/106 (79%), Positives = 96/106 (90%)
Frame = +2 / +2
Query: 254 DTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRFVREEVGTE 433
+TS+FAK+A FEQ+VRA LPKEVEAAR+AVENG+ NRI ECRSYPLYRFVR+E+GTE
Sbjct: 11 ETSVFAKLATFEQEVRAVLPKEVEAARSAVENGTAAQQNRITECRSYPLYRFVRKELGTE 190
Query: 434 YLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLPLC* 571
YLTGEKTRSPGEE++KV VA+NQ KHID LLECLKEWNGEPLP+C*
Sbjct: 191 YLTGEKTRSPGEEVDKVFVAMNQGKHIDALLECLKEWNGEPLPIC* 328
Score = 176 bits (378), Expect = 2e-043
Identities = 78/113 (69%), Positives = 86/113 (76%)
Frame = -2 / -1
Query: 591 SFSAGAAQQSGRGSPFHSLRHSSSGSMCLRWLMATSTLFSSSPGDLVFSPVRYSVPTSSR 412
S S + QQ GRGSPFHSLRHS S SMCL W MAT+TL +SSPGDLVFSPV+YSVP+S R
Sbjct: 348 SISQSSVQQIGRGSPFHSLRHSRSASMCLPWFMATNTLSTSSPGDLVFSPVKYSVPSSLR 169
Query: 411 TNRYSG*DRHSLILLGTRGLPFSTAARAASTSLGSAARTCCSNSATLAKMDVS 253
TNR SG DRHS+I +PFSTA AASTS GS ART CSN A+LA DVS
Sbjct: 168 TNR*SGYDRHSVIRFCCAAVPFSTALLAASTSFGSTARTSCSNVASLANTDVS 10
Score = 111 bits (236), Expect = 7e-024
Identities = 53/88 (60%), Positives = 62/88 (70%)
Frame = -1 / -3
Query: 571 SAERQGLAVPLLEALEQRVDVLALVDGHEHLVQLLAGRPRLLAGQVLGADLLAHEPVQRV 392
SA RQGL +PLLEAL++ VDVLALV G+EHLV RPRLL+ QVL + LLAHEPV+RV
Sbjct: 328 SANRQGLTIPLLEALKKCVDVLALVHGNEHLVHFFPRRPRLLSSQVLCSKLLAHEPVERV 149
Query: 391 GPALLDPVGDQRAAVLHGRARGFHLLGQ 308
PA D V +A+LHG G LL Q
Sbjct: 148 RPAFRDTVLLCGSAILHGAPGGLDLLWQ 65
>gb|BQ760542.1|BQ760542 EBro03_SQ001_F05_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ001_F05 5', mRNA sequence
Length = 321
Score = 207 bits (446), Expect = 8e-053
Identities = 83/95 (87%), Positives = 90/95 (94%)
Frame = +2 / +2
Query: 290 QQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRFVREEVGTEYLTGEKTRSPGE 469
Q +RAALPKEVEAARA+VENG+PL PNRIK+CRSYPLY+FVRE GTEYLTGEKTRSPGE
Sbjct: 2 QNIRAALPKEVEAARASVENGTPLAPNRIKDCRSYPLYQFVREVCGTEYLTGEKTRSPGE 181
Query: 470 ELNKVLVAINQRKHIDPLLECLKEWNGEPLPLC*A 574
ELNKVLVA+N+RKHIDPLLECLKEWNG PLPLC*A
Sbjct: 182 ELNKVLVAMNERKHIDPLLECLKEWNGAPLPLC*A 286
Score = 173 bits (373), Expect = 9e-043
Identities = 78/95 (82%), Positives = 82/95 (86%)
Frame = -2 / -1
Query: 573 AQQSGRGSPFHSLRHSSSGSMCLRWLMATSTLFSSSPGDLVFSPVRYSVPTSSRTNRYSG 394
AQQSGRG+PFHSLRHSSSGSMCLR MATSTLFSSSPGD VFSPVRYSVP +SRTN SG
Sbjct: 285 AQQSGRGAPFHSLRHSSSGSMCLRSFMATSTLFSSSPGDRVFSPVRYSVPHTSRTNW*SG 106
Query: 393 *DRHSLILLGTRGLPFSTAARAASTSLGSAARTCC 289
*+R SLI LG G+PFST ARAASTSLGSAAR C
Sbjct: 105 *ERQSLIRLGASGVPFSTDARAASTSLGSAARMFC 1
Score = 155 bits (332), Expect = 4e-037
Identities = 71/90 (78%), Positives = 75/90 (83%)
Frame = -1 / -3
Query: 571 SAERQGLAVPLLEALEQRVDVLALVDGHEHLVQLLAGRPRLLAGQVLGADLLAHEPVQRV 392
SAE QG AVPL EAL+QRVDVLALV GH+HLVQLL GRP LLAGQVLGA LA E V+ V
Sbjct: 283 SAEWQGRAVPLFEALQQRVDVLALVHGHQHLVQLLPGRPCLLAGQVLGAAHLADELVEWV 104
Query: 391 GPALLDPVGDQRAAVLHGRARGFHLLGQRR 302
G A+LDPVG QR AVLHGRARG HLLGQRR
Sbjct: 103 GAAVLDPVGSQRRAVLHGRARGLHLLGQRR 14
Score = 104 bits (222), Expect = 6e-022
Identities = 48/72 (66%), Positives = 50/72 (69%)
Frame = +1 / +1
Query: 358 SGPQQDQGXXXXXXXXXXXXGGRHRVPDRREDEVARRGAEQGARGHQPAQAHRPAARVPQ 537
+G Q DQG G RHRVPDRRED VAR GAEQGA GH+ AQAHRPAA VPQ
Sbjct: 70 AGSQPDQGLPLLPTLPVRPRGVRHRVPDRREDTVARGGAEQGAGGHERAQAHRPAAGVPQ 249
Query: 538 GVERRAPAALLS 573
VERRAPA LLS
Sbjct: 250 RVERRAPATLLS 285
>gb|BQ762717.1|BQ762717 EBro02_SQ004_I20_R root, 3 week, hydroponic grown, low nitrogen, cv
Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone
EBro02_SQ004_I20 5', mRNA sequence
Length = 368
Score = 205 bits (443), Expect = 2e-052
Identities = 83/110 (75%), Positives = 98/110 (89%)
Frame = +2 / +3
Query: 248 DVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRFVREEVG 427
DV+TS+FAK+A FEQ++RA LPKEVEAAR+AVENG+ NRI ECRSYPLYRFVR+E+G
Sbjct: 3 DVETSVFAKLAMFEQELRAMLPKEVEAARSAVENGTATQQNRITECRSYPLYRFVRKELG 182
Query: 428 TEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLPLC*AA 577
TEYLTGEKTRSPGEE++KV VA+N+ KHID LLECLK WNGEPLP+C* +
Sbjct: 183 TEYLTGEKTRSPGEEVDKVFVAMNKGKHIDALLECLKGWNGEPLPIC*GS 332
Score = 161 bits (347), Expect = 4e-039
Identities = 73/107 (68%), Positives = 83/107 (77%)
Frame = -2 / -2
Query: 567 QSGRGSPFHSLRHSSSGSMCLRWLMATSTLFSSSPGDLVFSPVRYSVPTSSRTNRYSG*D 388
Q GRGSPF LRHSSS SMCL +AT+TL +SSPGDLVFSPV+YSVP+S RTNR SG D
Sbjct: 322 QIGRGSPFQPLRHSSSASMCLPLFIATNTLSTSSPGDLVFSPVKYSVPSSLRTNR*SGYD 143
Query: 387 RHSLILLGTRGLPFSTAARAASTSLGSAARTCCSNSATLAKMDVSTS 247
RHS+I +PFSTA RAASTS G+ AR+ CSN A+LA DVSTS
Sbjct: 142 RHSVIRFCCVAVPFSTALRAASTSFGNIARSSCSNMASLANTDVSTS 2
>gb|BG414191.1|BG414191 HVSMEk0001A07f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0001A07f, mRNA sequence
Length = 586
Score = 176 bits (378), Expect(4) = 1e-051
Identities = 68/111 (61%), Positives = 89/111 (80%)
Frame = +2 / +1
Query: 233 GDAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRFV 412
G E + + ++F+K+ +FE+++R+ALP+E+EAAR A ENG+ +PN IKE RS+PLYRFV
Sbjct: 148 GPGEAESEATVFSKINKFEEELRSALPREIEAARVAFENGTAPIPNLIKESRSFPLYRFV 327
Query: 413 REEVGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLPL 565
REE+G YLTGEK SPGEE KV + I+Q K IDP+LECLKEWNGEPLP+
Sbjct: 328 REELGCVYLTGEKLLSPGEECTKVFLGISQNKLIDPMLECLKEWNGEPLPI 480
Score = 138 bits (297), Expect(2) = 1e-033
Identities = 67/110 (60%), Positives = 71/110 (64%)
Frame = -2 / -3
Query: 561 GRGSPFHSLRHSSSGSMCLRWLMATSTLFSSSPGDLVFSPVRYSVPTSSRTNRYSG*DRH 382
GRGSPFHSLRHSS GSM L WLM TL SSPGD FSPVRY+ P+SSRT RYSG D
Sbjct: 476 GRGSPFHSLRHSSIGSMSLFWLMPRKTLVHSSPGDSSFSPVRYTQPSSSRTKRYSGNDLL 297
Query: 381 SLILLGTRGLPFSTAARAASTSLGSAARTCCSNSATLAKMDVSTSRSASP 232
SLI LG +PFS A RAAS S G A R+ SN L S S S P
Sbjct: 296 SLIRLGMGAVPFSKATRAASISRGRADRSSSSNLLILENTVASLSASPGP 147
Score = 34.5 bits (69), Expect(4) = 1e-051
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +1 / +1
Query: 175 NYALMQKXRAVLVEHAL 225
NY LMQK RAVLV+HAL
Sbjct: 91 NYPLMQKLRAVLVDHAL 141
Score = 27.6 bits (54), Expect(4) = 1e-051
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = +3 / +1
Query: 135 EAVFXYADDPCS 170
EAVF YADD CS
Sbjct: 52 EAVFSYADDACS 87
Score = 24.4 bits (47), Expect(2) = 1e-033
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -1 / -3
Query: 169 LHGSSAYXNTASRS 128
LH SSA NTASRS
Sbjct: 86 LHASSA*LNTASRS 45
Score = 22.1 bits (42), Expect(4) = 1e-051
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +2 / +1
Query: 83 LHNARFCEKDLQTAI 127
L +ARF EK L TAI
Sbjct: 1 LSSARFSEKSLITAI 45
>gb|BG365997.1|BG365997 HVSMEi0004M09f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0004M09f, mRNA sequence
Length = 939
Score = 177 bits (380), Expect(3) = 9e-051
Identities = 69/111 (62%), Positives = 89/111 (80%)
Frame = +2 / +1
Query: 233 GDAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRFV 412
G E D + ++F+K+ +FE+++R+ALP+E+EAAR A ENG+ +PN IKE RS+PLYR V
Sbjct: 250 GPGEADSEATVFSKINKFEEELRSALPREIEAARVAFENGTAPIPNLIKESRSFPLYRLV 429
Query: 413 REEVGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLPL 565
REE+G YLTGEK SPGEE KVL+ I+Q K IDP+LECLKEWNGEPLP+
Sbjct: 430 REELGCVYLTGEKLLSPGEECTKVLLGISQNKLIDPMLECLKEWNGEPLPI 582
Score = 140 bits (300), Expect(2) = 4e-038
Identities = 67/110 (60%), Positives = 72/110 (65%)
Frame = -2 / -2
Query: 561 GRGSPFHSLRHSSSGSMCLRWLMATSTLFSSSPGDLVFSPVRYSVPTSSRTNRYSG*DRH 382
GRGSPFHSLRHSS GSM L WLM + TL SSPGD FSPVRY+ P+SSRT RYSG D
Sbjct: 578 GRGSPFHSLRHSSMGSMSLFWLMPSKTLVHSSPGDSSFSPVRYTQPSSSRTKRYSGNDLL 399
Query: 381 SLILLGTRGLPFSTAARAASTSLGSAARTCCSNSATLAKMDVSTSRSASP 232
SLI LG +PFS A RAAS S G A R+ SN L S S S P
Sbjct: 398 SLIRLGMGAVPFSKATRAASISRGRADRSSSSNLLILENTVASLSASPGP 249
Score = 38.2 bits (77), Expect(2) = 4e-038
Identities = 18/45 (40%), Positives = 25/45 (55%)
Frame = -1 / -2
Query: 169 LHGSSAYXNTASRSDRRLQVLLAEARVVEPPLAFRLRDFLATCVT 35
LH SSA NTASRS +++ + + P+ F + F TCVT
Sbjct: 188 LHASSA*LNTASRSMAVMRLFSIKRAMERSPVGFMVSTFFNTCVT 54
Score = 34.5 bits (69), Expect(3) = 9e-051
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +1 / +1
Query: 175 NYALMQKXRAVLVEHAL 225
NY LMQK RAVLV+HAL
Sbjct: 193 NYPLMQKLRAVLVDHAL 243
Score = 27.6 bits (54), Expect(3) = 9e-051
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = +3 / +1
Query: 135 EAVFXYADDPCS 170
EAVF YADD CS
Sbjct: 154 EAVFSYADDACS 189
>gb|AV917458.1|AV917458 AV917458 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags10a01 3', mRNA sequence
Length = 701
Score = 176 bits (378), Expect(3) = 2e-050
Identities = 68/111 (61%), Positives = 89/111 (80%)
Frame = +2 / -2
Query: 233 GDAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRFV 412
G E + + ++F+K+ +FE+++R+ALP+E+EAAR A ENG+ +PN IKE RS+PLYRFV
Sbjct: 583 GPGEAESEATVFSKINKFEEELRSALPREIEAARVAFENGTAPIPNLIKESRSFPLYRFV 404
Query: 413 REEVGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLPL 565
REE+G YLTGEK SPGEE KV + I+Q K IDP+LECLKEWNGEPLP+
Sbjct: 403 REELGCVYLTGEKLLSPGEECTKVFLGISQNKLIDPMLECLKEWNGEPLPI 251
Score = 139 bits (298), Expect(2) = 8e-034
Identities = 67/110 (60%), Positives = 71/110 (64%)
Frame = -2 / +3
Query: 561 GRGSPFHSLRHSSSGSMCLRWLMATSTLFSSSPGDLVFSPVRYSVPTSSRTNRYSG*DRH 382
GRGSPFHSLRHSS GSM L WLM TL SSPGD FSPVRY+ P+SSRT RYSG D
Sbjct: 255 GRGSPFHSLRHSSMGSMSLFWLMPRKTLVHSSPGDSSFSPVRYTQPSSSRTKRYSGNDLL 434
Query: 381 SLILLGTRGLPFSTAARAASTSLGSAARTCCSNSATLAKMDVSTSRSASP 232
SLI LG +PFS A RAAS S G A R+ SN L S S S P
Sbjct: 435 SLIRLGMGAVPFSKATRAASISRGRADRSSSSNLLILENTVASLSASPGP 584
Score = 104 bits (222), Expect = 6e-022
Identities = 54/91 (59%), Positives = 58/91 (63%)
Frame = -1 / +2
Query: 574 SSAERQGLAVPLLEALEQRVDVLALVDGHEHLVQLLAGRPRLLAGQVLGADLLAHEPVQR 395
S + QGLAVPLLEALE VD L L D E L LAG +LLAG+V A+LLA E VQR
Sbjct: 242 SDVDGQGLAVPLLEALEHGVDELVLADAEEDLGAFLAGGQQLLAGEVHAAELLADEAVQR 421
Query: 394 VGPALLDPVGDQRAAVLHGRARGFHLLGQRR 302
PALLD VGD R AVL G A G L Q R
Sbjct: 422 ERPALLDQVGDGRRAVLEGHAGGLDLPRQGR 514
Score = 34.5 bits (69), Expect(3) = 2e-050
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +1 / -2
Query: 175 NYALMQKXRAVLVEHAL 225
NY LMQK RAVLV+HAL
Sbjct: 640 NYPLMQKLRAVLVDHAL 590
Score = 27.6 bits (54), Expect(3) = 2e-050
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = +3 / -2
Query: 135 EAVFXYADDPCS 170
EAVF YADD CS
Sbjct: 679 EAVFSYADDACS 644
Score = 24.4 bits (47), Expect(2) = 8e-034
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -1 / +3
Query: 169 LHGSSAYXNTASRS 128
LH SSA NTASRS
Sbjct: 645 LHASSA*LNTASRS 686
>gb|BI959849.1|BI959849 HVSMEn0022A20f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0022A20f, mRNA sequence
Length = 623
Score = 174 bits (375), Expect(3) = 4e-050
Identities = 68/111 (61%), Positives = 89/111 (80%)
Frame = +2 / +2
Query: 233 GDAERDVDTSIFAKVAEFEQQVRAALPKEVEAARAAVENGSPLVPNRIKECRSYPLYRFV 412
G E + + ++F+K+ +FE+++R+ALP+E+EAAR A ENG+ +PN IKE RS+PLYRFV
Sbjct: 137 GPGEAEREGTVFSKINKFEEELRSALPREIEAARVAFENGTAPIPNLIKESRSFPLYRFV 316
Query: 413 REEVGTEYLTGEKTRSPGEELNKVLVAINQRKHIDPLLECLKEWNGEPLPL 565
REE+G YLTGEK SPGEE KV + I+Q K IDP+LECLKEWNGEPLP+
Sbjct: 317 REELGCVYLTGEKLLSPGEECTKVFLGISQNKLIDPMLECLKEWNGEPLPI 469
Score = 138 bits (296), Expect(2) = 2e-033
Identities = 67/110 (60%), Positives = 71/110 (64%)
Frame = -2 / -3
Query: 561 GRGSPFHSLRHSSSGSMCLRWLMATSTLFSSSPGDLVFSPVRYSVPTSSRTNRYSG*DRH 382
GRGSPFHSLRHSS GSM L WLM TL SSPGD FSPVRY+ P+SSRT RYSG D
Sbjct: 465 GRGSPFHSLRHSSMGSMSLFWLMPRKTLVHSSPGDSSFSPVRYTQPSSSRTKRYSGNDLL 286
Query: 381 SLILLGTRGLPFSTAARAASTSLGSAARTCCSNSATLAKMDVSTSRSASP 232
SLI LG +PFS A RAAS S G A R+ SN L S S S P
Sbjct: 285 SLIRLGMGAVPFSKATRAASISRGRADRSSSSNLLILENTVPSLSASPGP 136
Score = 104 bits (222), Expect = 6e-022
Identities = 54/91 (59%), Positives = 58/91 (63%)
Frame = -1 / -2
Query: 574 SSAERQGLAVPLLEALEQRVDVLALVDGHEHLVQLLAGRPRLLAGQVLGADLLAHEPVQR 395
S + QGLAVPLLEALE VD L L D E L LAG +LLAG+V A+LLA E VQR
Sbjct: 478 SDVDGQGLAVPLLEALEHGVDELVLADAEEDLGAFLAGGQQLLAGEVHAAELLADEAVQR 299
Query: 394 VGPALLDPVGDQRAAVLHGRARGFHLLGQRR 302
PALLD VGD R AVL G A G L Q R
Sbjct: 298 ERPALLDQVGDGRRAVLEGHAGGLDLPRQGR 206
Score = 34.5 bits (69), Expect(3) = 4e-050
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +1 / +2
Query: 175 NYALMQKXRAVLVEHAL 225
NY LMQK RAVLV+HAL
Sbjct: 80 NYPLMQKLRAVLVDHAL 130
Score = 27.6 bits (54), Expect(3) = 4e-050
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = +3 / +2
Query: 135 EAVFXYADDPCS 170
EAVF YADD CS
Sbjct: 41 EAVFSYADDACS 76
Score = 24.4 bits (47), Expect(2) = 2e-033
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -1 / -3
Query: 169 LHGSSAYXNTASRS 128
LH SSA NTASRS
Sbjct: 75 LHASSA*LNTASRS 34
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 317,819,070
Number of Sequences: 312970
Number of extensions: 4424613
Number of successful extensions: 73837
Number of sequences better than 1.0e-020: 167
length of database: 58,378,179
effective HSP length: 52
effective length of database: 42,103,739
effective search space used: 9599652492
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)