TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3588987.2.1
(487 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AV922011.1|AV922011 AV922011 K. Sato unpublished cDNA li... 206 7e-053
gb|CB859832.1|CB859832 HI11L23w HI Hordeum vulgare subsp. v... 206 7e-053
gb|CB874745.1|CB874745 HX06D05w HX Hordeum vulgare subsp. v... 206 7e-053
gb|CB875451.1|CB875451 HX08F13w HX Hordeum vulgare subsp. v... 206 7e-053
gb|CV061294.1|CV061294 BNEL67b5 Barley EST endosperm librar... 206 7e-053
gb|AV919525.1|AV919525 AV919525 K. Sato unpublished cDNA li... 201 2e-051
gb|AW982381.2|AW982381 HVSMEg0003B23f Hordeum vulgare pre-a... 193 5e-049
gb|AV917985.1|AV917985 AV917985 K. Sato unpublished cDNA li... 193 5e-049
gb|AV921401.1|AV921401 AV921401 K. Sato unpublished cDNA li... 193 5e-049
gb|BJ468316.1|BJ468316 BJ468316 K. Sato unpublished cDNA li... 193 5e-049
gb|BJ468417.1|BJ468417 BJ468417 K. Sato unpublished cDNA li... 193 5e-049
gb|BQ464281.1|BQ464281 HF01N09T HF Hordeum vulgare subsp. v... 193 5e-049
gb|BU987175.1|BU987175 HF14A05r HF Hordeum vulgare subsp. v... 193 5e-049
gb|CK122738.1|CK122738 BES1824105j24 BES1824 Hordeum vulgar... 193 5e-049
gb|CK123682.1|CK123682 BES1824105b08 BES1824 Hordeum vulgar... 193 5e-049
gb|CK125898.1|CK125898 BES1824111B1f01 BES1824 Hordeum vulg... 193 5e-049
gb|BM372544.2|BM372544 EBpi05_SQ003_E07_R pistil, 8 DPA, no... 193 7e-049
gb|AW982510.3|AW982510 HVSMEg0003H10f Hordeum vulgare pre-a... 190 4e-048
gb|AJ433069.1|AJ433069 AJ433069 S00002 Hordeum vulgare subs... 190 5e-048
gb|BM372473.2|BM372473 EBpi05_SQ003_B02_R pistil, 8 DPA, no... 188 2e-047
gb|AV918402.1|AV918402 AV918402 K. Sato unpublished cDNA li... 184 2e-046
gb|BJ456841.1|BJ456841 BJ456841 K. Sato unpublished cDNA li... 183 4e-046
gb|BJ459539.1|BJ459539 BJ459539 K. Sato unpublished cDNA li... 180 4e-045
gb|BQ659826.1|BQ659826 HF01N09w HF Hordeum vulgare subsp. v... 180 4e-045
gb|BI948007.1|BI948007 HVSMEl0007M23f Hordeum vulgare spike... 179 7e-045
gb|BQ764688.1|BQ764688 EBca01_SQ004_I16_R carpel, pre-anthe... 155 1e-037
gb|BJ468713.1|BJ468713 BJ468713 K. Sato unpublished cDNA li... 152 1e-036
gb|BJ476688.1|BJ476688 BJ476688 K. Sato unpublished cDNA li... 148 2e-035
gb|BQ762687.1|BQ762687 EBro02_SQ004_B20_R root, 3 week, hyd... 143 6e-034
gb|BQ762688.1|BQ762688 EBro02_SQ004_B21_R root, 3 week, hyd... 143 6e-034
gb|BU976043.1|BU976043 HA03A17u HA Hordeum vulgare subsp. v... 143 8e-034
gb|BQ660349.1|BQ660349 HI02A16u HI Hordeum vulgare subsp. v... 140 4e-033
gb|BQ468025.1|BQ468025 HR01L03r HR Hordeum vulgare subsp. v... 138 1e-032
gb|CA006166.1|CA006166 HU05B18u HU Hordeum vulgare subsp. v... 136 7e-032
gb|BU968615.1|BU968615 HB08B02r BC Hordeum vulgare subsp. v... 136 9e-032
gb|AV916463.1|AV916463 AV916463 K. Sato unpublished cDNA li... 131 2e-030
gb|BQ468560.1|BQ468560 HM01J16T HM Hordeum vulgare subsp. v... 128 2e-029
gb|CA010273.1|CA010273 HT10P01u HT Hordeum vulgare subsp. v... 127 4e-029
gb|CA010063.1|CA010063 HT11L04u HT Hordeum vulgare subsp. v... 88 3e-026
gb|BU967383.1|BU967383 HB04C07r BC Hordeum vulgare subsp. v... 102 1e-021
gb|BI777816.2|BI777816 EBro08_SQ002_D01_R root, 3 week, dro... 101 2e-021
gb|CB859612.1|CB859612 HI11A04w HI Hordeum vulgare subsp. v... 101 2e-021
gb|BE231164.2|BE231164 HVSMEg0017E08f Hordeum vulgare pre-a... 100 4e-021
>gb|AV922011.1|AV922011 AV922011 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags19g10 3', mRNA sequence
Length = 589
Score = 206 bits (444), Expect = 7e-053
Identities = 86/106 (81%), Positives = 95/106 (89%)
Frame = -1 / -2
Query: 487 LETYQAGLKHXPKNQELLDGVRRCVEQITKASRGELSEEELKERQNKAMQDPEIQNILTD 308
+ETYQ GLKH P NQELLDGV+RC++QI KA+RGEL+ EELKERQ KAMQDPEIQNILTD
Sbjct: 501 METYQEGLKHDPSNQELLDGVKRCIQQINKANRGELTPEELKERQGKAMQDPEIQNILTD 322
Query: 307 PIMQQVLTDLQENPRAAQAHLKNPGVMQKIQKLVSAGIVQMK*TVA 170
P+M+QVL D QENP+AAQ HLKNPGV QKIQKLVSAGIVQMK*T A
Sbjct: 321 PVMRQVLIDFQENPKAAQEHLKNPGVKQKIQKLVSAGIVQMK*TKA 184
Score = 143 bits (307), Expect = 6e-034
Identities = 68/102 (66%), Positives = 76/102 (74%)
Frame = +2 / +1
Query: 179 LLHLNYPCADELLDLLHHSGVLEVRLRSPRVLLQIRQNLLHDRISQDVLDLRVLHGFVLS 358
LLHL+YPCA ELLDLL H+GVLE+ LRS +LL+I Q+L H R+ QDVLD RVLH F LS
Sbjct: 193 LLHLDYPCAHELLDLLLHAGVLEMLLRSLGILLEINQHLPHHRVRQDVLDFRVLHSFALS 372
Query: 359 LFQFLLTEFASARLGDLFNTPPYTIK*LLVFRXML*ASLISF 484
L QFL E AS RL DL NT YTI+ LLV R ML A LISF
Sbjct: 373 LLQFLRGELASVRLVDLLNTSLYTIEQLLVTRIMLQAFLISF 498
Score = 111 bits (236), Expect(2) = 6e-040
Identities = 43/55 (78%), Positives = 47/55 (85%)
Frame = +3 / +2
Query: 171 ATVYFI*TIPALTSFWIFCITPGFLRCACAARGFSCRSVKTCCMIGSVRMFWISG 335
A VYFI TIPALTSFWIFC TPGFLRC+CAA GFS +S+ TC + GSVRMFWISG
Sbjct: 185 ALVYFIWTIPALTSFWIFCFTPGFLRCSCAALGFSWKSINTCRITGSVRMFWISG 349
Score = 80.8 bits (170), Expect(2) = 8e-031
Identities = 39/58 (67%), Positives = 45/58 (77%)
Frame = -2 / -3
Query: 486 WKLIKLA*SMXRKTRSYLMV*GGVLNRSPRRAEANSVRRN*KRDRTKPCKTLRSRTS* 313
WKLI+ A*SM R TRS MV* V +RS RR EA+S RRN*+RDR K C+TL+SRTS*
Sbjct: 500 WKLIRKA*SMIRVTRSCSMV*RDVFSRSTRRTEASSPRRN*RRDRAKLCRTLKSRTS* 327
Score = 72.5 bits (152), Expect(2) = 6e-040
Identities = 30/47 (63%), Positives = 34/47 (72%)
Frame = +1 / +3
Query: 346 LCSVSLSVPPH*VRLCSPW*SVQHTSLHHQVTPGFSGHALGQLDKFP 486
LC VS SVPP * RLCSP *S ++ SLHH+ PG+S HA G DKFP
Sbjct: 360 LCPVSPSVPPG*ARLCSPC*SAEYISLHHRAAPGYSDHASGLPDKFP 500
Score = 72.1 bits (151), Expect(2) = 8e-031
Identities = 30/43 (69%), Positives = 33/43 (76%)
Frame = -3 / -1
Query: 299 AAGFDGSAGEPSGCAGAPQEPRSDAEDPEARQRRDSSDEVDGG 171
AAG D GE GCAGA QEPR +A+DPEAR+RRDS DEVD G
Sbjct: 313 AAGVD*FPGESQGCAGASQEPRREAKDPEARERRDSPDEVDQG 185
>gb|CB859832.1|CB859832 HI11L23w HI Hordeum vulgare subsp. vulgare cDNA clone HI11L23
3-PRIME, mRNA sequence
Length = 570
Score = 206 bits (444), Expect = 7e-053
Identities = 86/106 (81%), Positives = 95/106 (89%)
Frame = -1 / -3
Query: 487 LETYQAGLKHXPKNQELLDGVRRCVEQITKASRGELSEEELKERQNKAMQDPEIQNILTD 308
+ETYQ GLKH P NQELLDGV+RC++QI KA+RGEL+ EELKERQ KAMQDPEIQNILTD
Sbjct: 451 METYQEGLKHDPSNQELLDGVKRCIQQINKANRGELTPEELKERQGKAMQDPEIQNILTD 272
Query: 307 PIMQQVLTDLQENPRAAQAHLKNPGVMQKIQKLVSAGIVQMK*TVA 170
P+M+QVL D QENP+AAQ HLKNPGV QKIQKLVSAGIVQMK*T A
Sbjct: 271 PVMRQVLIDFQENPKAAQEHLKNPGVKQKIQKLVSAGIVQMK*TKA 134
Score = 143 bits (307), Expect = 6e-034
Identities = 68/102 (66%), Positives = 76/102 (74%)
Frame = +2 / +2
Query: 179 LLHLNYPCADELLDLLHHSGVLEVRLRSPRVLLQIRQNLLHDRISQDVLDLRVLHGFVLS 358
LLHL+YPCA ELLDLL H+GVLE+ LRS +LL+I Q+L H R+ QDVLD RVLH F LS
Sbjct: 143 LLHLDYPCAHELLDLLLHAGVLEMLLRSLGILLEINQHLPHHRVRQDVLDFRVLHSFALS 322
Query: 359 LFQFLLTEFASARLGDLFNTPPYTIK*LLVFRXML*ASLISF 484
L QFL E AS RL DL NT YTI+ LLV R ML A LISF
Sbjct: 323 LLQFLRGELASVRLVDLLNTSLYTIEQLLVTRIMLQAFLISF 448
Score = 111 bits (236), Expect(2) = 6e-040
Identities = 43/55 (78%), Positives = 47/55 (85%)
Frame = +3 / +3
Query: 171 ATVYFI*TIPALTSFWIFCITPGFLRCACAARGFSCRSVKTCCMIGSVRMFWISG 335
A VYFI TIPALTSFWIFC TPGFLRC+CAA GFS +S+ TC + GSVRMFWISG
Sbjct: 135 ALVYFIWTIPALTSFWIFCFTPGFLRCSCAALGFSWKSINTCRITGSVRMFWISG 299
Score = 80.8 bits (170), Expect(2) = 8e-031
Identities = 39/58 (67%), Positives = 45/58 (77%)
Frame = -2 / -1
Query: 486 WKLIKLA*SMXRKTRSYLMV*GGVLNRSPRRAEANSVRRN*KRDRTKPCKTLRSRTS* 313
WKLI+ A*SM R TRS MV* V +RS RR EA+S RRN*+RDR K C+TL+SRTS*
Sbjct: 450 WKLIRKA*SMIRVTRSCSMV*RDVFSRSTRRTEASSPRRN*RRDRAKLCRTLKSRTS* 277
Score = 72.5 bits (152), Expect(2) = 6e-040
Identities = 30/47 (63%), Positives = 34/47 (72%)
Frame = +1 / +1
Query: 346 LCSVSLSVPPH*VRLCSPW*SVQHTSLHHQVTPGFSGHALGQLDKFP 486
LC VS SVPP * RLCSP *S ++ SLHH+ PG+S HA G DKFP
Sbjct: 310 LCPVSPSVPPG*ARLCSPC*SAEYISLHHRAAPGYSDHASGLPDKFP 450
Score = 72.1 bits (151), Expect(2) = 8e-031
Identities = 30/43 (69%), Positives = 33/43 (76%)
Frame = -3 / -2
Query: 299 AAGFDGSAGEPSGCAGAPQEPRSDAEDPEARQRRDSSDEVDGG 171
AAG D GE GCAGA QEPR +A+DPEAR+RRDS DEVD G
Sbjct: 263 AAGVD*FPGESQGCAGASQEPRREAKDPEARERRDSPDEVDQG 135
>gb|CB874745.1|CB874745 HX06D05w HX Hordeum vulgare subsp. vulgare cDNA clone HX06D05
3-PRIME, mRNA sequence
Length = 595
Score = 206 bits (444), Expect = 7e-053
Identities = 86/106 (81%), Positives = 95/106 (89%)
Frame = -1 / -1
Query: 487 LETYQAGLKHXPKNQELLDGVRRCVEQITKASRGELSEEELKERQNKAMQDPEIQNILTD 308
+ETYQ GLKH P NQELLDGV+RC++QI KA+RGEL+ EELKERQ KAMQDPEIQNILTD
Sbjct: 481 METYQEGLKHDPSNQELLDGVKRCIQQINKANRGELTPEELKERQGKAMQDPEIQNILTD 302
Query: 307 PIMQQVLTDLQENPRAAQAHLKNPGVMQKIQKLVSAGIVQMK*TVA 170
P+M+QVL D QENP+AAQ HLKNPGV QKIQKLVSAGIVQMK*T A
Sbjct: 301 PVMRQVLIDFQENPKAAQEHLKNPGVKQKIQKLVSAGIVQMK*TKA 164
Score = 143 bits (307), Expect = 6e-034
Identities = 68/102 (66%), Positives = 76/102 (74%)
Frame = +2 / +2
Query: 179 LLHLNYPCADELLDLLHHSGVLEVRLRSPRVLLQIRQNLLHDRISQDVLDLRVLHGFVLS 358
LLHL+YPCA ELLDLL H+GVLE+ LRS +LL+I Q+L H R+ QDVLD RVLH F LS
Sbjct: 173 LLHLDYPCAHELLDLLLHAGVLEMLLRSLGILLEINQHLPHHRVRQDVLDFRVLHSFALS 352
Query: 359 LFQFLLTEFASARLGDLFNTPPYTIK*LLVFRXML*ASLISF 484
L QFL E AS RL DL NT YTI+ LLV R ML A LISF
Sbjct: 353 LLQFLRGELASVRLVDLLNTSLYTIEQLLVTRIMLQAFLISF 478
Score = 111 bits (236), Expect(2) = 6e-040
Identities = 43/55 (78%), Positives = 47/55 (85%)
Frame = +3 / +3
Query: 171 ATVYFI*TIPALTSFWIFCITPGFLRCACAARGFSCRSVKTCCMIGSVRMFWISG 335
A VYFI TIPALTSFWIFC TPGFLRC+CAA GFS +S+ TC + GSVRMFWISG
Sbjct: 165 ALVYFIWTIPALTSFWIFCFTPGFLRCSCAALGFSWKSINTCRITGSVRMFWISG 329
Score = 80.8 bits (170), Expect(2) = 8e-031
Identities = 39/58 (67%), Positives = 45/58 (77%)
Frame = -2 / -2
Query: 486 WKLIKLA*SMXRKTRSYLMV*GGVLNRSPRRAEANSVRRN*KRDRTKPCKTLRSRTS* 313
WKLI+ A*SM R TRS MV* V +RS RR EA+S RRN*+RDR K C+TL+SRTS*
Sbjct: 480 WKLIRKA*SMIRVTRSCSMV*RDVFSRSTRRTEASSPRRN*RRDRAKLCRTLKSRTS* 307
Score = 72.5 bits (152), Expect(2) = 6e-040
Identities = 30/47 (63%), Positives = 34/47 (72%)
Frame = +1 / +1
Query: 346 LCSVSLSVPPH*VRLCSPW*SVQHTSLHHQVTPGFSGHALGQLDKFP 486
LC VS SVPP * RLCSP *S ++ SLHH+ PG+S HA G DKFP
Sbjct: 340 LCPVSPSVPPG*ARLCSPC*SAEYISLHHRAAPGYSDHASGLPDKFP 480
Score = 72.1 bits (151), Expect(2) = 8e-031
Identities = 30/43 (69%), Positives = 33/43 (76%)
Frame = -3 / -3
Query: 299 AAGFDGSAGEPSGCAGAPQEPRSDAEDPEARQRRDSSDEVDGG 171
AAG D GE GCAGA QEPR +A+DPEAR+RRDS DEVD G
Sbjct: 293 AAGVD*FPGESQGCAGASQEPRREAKDPEARERRDSPDEVDQG 165
>gb|CB875451.1|CB875451 HX08F13w HX Hordeum vulgare subsp. vulgare cDNA clone HX08F13
3-PRIME, mRNA sequence
Length = 595
Score = 206 bits (444), Expect = 7e-053
Identities = 86/106 (81%), Positives = 95/106 (89%)
Frame = -1 / -1
Query: 487 LETYQAGLKHXPKNQELLDGVRRCVEQITKASRGELSEEELKERQNKAMQDPEIQNILTD 308
+ETYQ GLKH P NQELLDGV+RC++QI KA+RGEL+ EELKERQ KAMQDPEIQNILTD
Sbjct: 481 METYQEGLKHDPSNQELLDGVKRCIQQINKANRGELTPEELKERQGKAMQDPEIQNILTD 302
Query: 307 PIMQQVLTDLQENPRAAQAHLKNPGVMQKIQKLVSAGIVQMK*TVA 170
P+M+QVL D QENP+AAQ HLKNPGV QKIQKLVSAGIVQMK*T A
Sbjct: 301 PVMRQVLIDFQENPKAAQEHLKNPGVKQKIQKLVSAGIVQMK*TKA 164
Score = 143 bits (307), Expect = 6e-034
Identities = 68/102 (66%), Positives = 76/102 (74%)
Frame = +2 / +2
Query: 179 LLHLNYPCADELLDLLHHSGVLEVRLRSPRVLLQIRQNLLHDRISQDVLDLRVLHGFVLS 358
LLHL+YPCA ELLDLL H+GVLE+ LRS +LL+I Q+L H R+ QDVLD RVLH F LS
Sbjct: 173 LLHLDYPCAHELLDLLLHAGVLEMLLRSLGILLEINQHLPHHRVRQDVLDFRVLHSFALS 352
Query: 359 LFQFLLTEFASARLGDLFNTPPYTIK*LLVFRXML*ASLISF 484
L QFL E AS RL DL NT YTI+ LLV R ML A LISF
Sbjct: 353 LLQFLRGELASVRLVDLLNTSLYTIEQLLVTRIMLQAFLISF 478
Score = 111 bits (236), Expect(2) = 6e-040
Identities = 43/55 (78%), Positives = 47/55 (85%)
Frame = +3 / +3
Query: 171 ATVYFI*TIPALTSFWIFCITPGFLRCACAARGFSCRSVKTCCMIGSVRMFWISG 335
A VYFI TIPALTSFWIFC TPGFLRC+CAA GFS +S+ TC + GSVRMFWISG
Sbjct: 165 ALVYFIWTIPALTSFWIFCFTPGFLRCSCAALGFSWKSINTCRITGSVRMFWISG 329
Score = 80.8 bits (170), Expect(2) = 8e-031
Identities = 39/58 (67%), Positives = 45/58 (77%)
Frame = -2 / -2
Query: 486 WKLIKLA*SMXRKTRSYLMV*GGVLNRSPRRAEANSVRRN*KRDRTKPCKTLRSRTS* 313
WKLI+ A*SM R TRS MV* V +RS RR EA+S RRN*+RDR K C+TL+SRTS*
Sbjct: 480 WKLIRKA*SMIRVTRSCSMV*RDVFSRSTRRTEASSPRRN*RRDRAKLCRTLKSRTS* 307
Score = 72.5 bits (152), Expect(2) = 6e-040
Identities = 30/47 (63%), Positives = 34/47 (72%)
Frame = +1 / +1
Query: 346 LCSVSLSVPPH*VRLCSPW*SVQHTSLHHQVTPGFSGHALGQLDKFP 486
LC VS SVPP * RLCSP *S ++ SLHH+ PG+S HA G DKFP
Sbjct: 340 LCPVSPSVPPG*ARLCSPC*SAEYISLHHRAAPGYSDHASGLPDKFP 480
Score = 72.1 bits (151), Expect(2) = 8e-031
Identities = 30/43 (69%), Positives = 33/43 (76%)
Frame = -3 / -3
Query: 299 AAGFDGSAGEPSGCAGAPQEPRSDAEDPEARQRRDSSDEVDGG 171
AAG D GE GCAGA QEPR +A+DPEAR+RRDS DEVD G
Sbjct: 293 AAGVD*FPGESQGCAGASQEPRREAKDPEARERRDSPDEVDQG 165
>gb|CV061294.1|CV061294 BNEL67b5 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL67b5 5' similar to TPR1, mRNA
sequence
Length = 627
Score = 206 bits (444), Expect = 7e-053
Identities = 86/106 (81%), Positives = 95/106 (89%)
Frame = -1 / +2
Query: 487 LETYQAGLKHXPKNQELLDGVRRCVEQITKASRGELSEEELKERQNKAMQDPEIQNILTD 308
+ETYQ GLKH P NQELLDGV+RC++QI KA+RGEL+ EELKERQ KAMQDPEIQNILTD
Sbjct: 233 METYQEGLKHDPSNQELLDGVKRCIQQINKANRGELTPEELKERQGKAMQDPEIQNILTD 412
Query: 307 PIMQQVLTDLQENPRAAQAHLKNPGVMQKIQKLVSAGIVQMK*TVA 170
P+M+QVL D QENP+AAQ HLKNPGV QKIQKLVSAGIVQMK*T A
Sbjct: 413 PVMRQVLIDFQENPKAAQEHLKNPGVKQKIQKLVSAGIVQMK*TKA 550
Score = 146 bits (313), Expect = 9e-035
Identities = 69/102 (67%), Positives = 77/102 (75%)
Frame = +2 / -3
Query: 179 LLHLNYPCADELLDLLHHSGVLEVRLRSPRVLLQIRQNLLHDRISQDVLDLRVLHGFVLS 358
LLHL+YPCA ELLDLL H+GVLE+ LRS +LL+I Q+L H R+ QDVLD RVLH F LS
Sbjct: 541 LLHLDYPCAHELLDLLLHAGVLEMLLRSLGILLEINQHLPHHRVRQDVLDFRVLHSFALS 362
Query: 359 LFQFLLTEFASARLGDLFNTPPYTIK*LLVFRXML*ASLISF 484
LFQFL E AS RL DL NT YTI+ LLV R ML A LISF
Sbjct: 361 LFQFLRGELASVRLVDLLNTSLYTIEQLLVTRIMLQAFLISF 236
Score = 111 bits (236), Expect(2) = 6e-041
Identities = 43/55 (78%), Positives = 47/55 (85%)
Frame = +3 / -1
Query: 171 ATVYFI*TIPALTSFWIFCITPGFLRCACAARGFSCRSVKTCCMIGSVRMFWISG 335
A VYFI TIPALTSFWIFC TPGFLRC+CAA GFS +S+ TC + GSVRMFWISG
Sbjct: 549 ALVYFIWTIPALTSFWIFCFTPGFLRCSCAALGFSWKSINTCRITGSVRMFWISG 385
Score = 82.2 bits (173), Expect(2) = 3e-031
Identities = 40/58 (68%), Positives = 45/58 (77%)
Frame = -2 / +3
Query: 486 WKLIKLA*SMXRKTRSYLMV*GGVLNRSPRRAEANSVRRN*KRDRTKPCKTLRSRTS* 313
WKLI+ A*SM R TRS MV* V +RS RR EA+S RRN*KRDR K C+TL+SRTS*
Sbjct: 234 WKLIRKA*SMIRVTRSCSMV*RDVFSRSTRRTEASSPRRN*KRDRAKLCRTLKSRTS* 407
Score = 75.8 bits (159), Expect(2) = 6e-041
Identities = 31/47 (65%), Positives = 35/47 (74%)
Frame = +1 / -2
Query: 346 LCSVSLSVPPH*VRLCSPW*SVQHTSLHHQVTPGFSGHALGQLDKFP 486
LC VSLSVPP * RLCSP *S ++ SLHH+ PG+S HA G DKFP
Sbjct: 374 LCPVSLSVPPG*ARLCSPC*SAEYISLHHRAAPGYSDHASGLPDKFP 234
Score = 72.1 bits (151), Expect(2) = 3e-031
Identities = 30/43 (69%), Positives = 33/43 (76%)
Frame = -3 / +1
Query: 299 AAGFDGSAGEPSGCAGAPQEPRSDAEDPEARQRRDSSDEVDGG 171
AAG D GE GCAGA QEPR +A+DPEAR+RRDS DEVD G
Sbjct: 421 AAGVD*FPGESQGCAGASQEPRREAKDPEARERRDSPDEVDQG 549
>gb|AV919525.1|AV919525 AV919525 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags6g21 3', mRNA sequence
Length = 572
Score = 201 bits (434), Expect = 2e-051
Identities = 84/106 (79%), Positives = 93/106 (87%)
Frame = -1 / -3
Query: 487 LETYQAGLKHXPKNQELLDGVRRCVEQITKASRGELSEEELKERQNKAMQDPEIQNILTD 308
+ETYQ GLKH P NQELLDGV+RC++QI KA+RGEL+ EELKE Q KAMQDPEIQNILTD
Sbjct: 435 METYQXGLKHDPSNQELLDGVKRCIQQINKANRGELTPEELKEXQGKAMQDPEIQNILTD 256
Query: 307 PIMQQVLTDLQENPRAAQAHLKNPGVMQKIQKLVSAGIVQMK*TVA 170
P+M+QVL D QENP+AAQ HLKNPGV QK QKLVSAGIVQMK*T A
Sbjct: 255 PVMRQVLIDFQENPKAAQEHLKNPGVKQKTQKLVSAGIVQMK*TKA 118
Score = 139 bits (298), Expect = 1e-032
Identities = 66/102 (64%), Positives = 74/102 (72%)
Frame = +2 / +1
Query: 179 LLHLNYPCADELLDLLHHSGVLEVRLRSPRVLLQIRQNLLHDRISQDVLDLRVLHGFVLS 358
LLHL+YPCA ELL LL H+GVLE+ LRS +LL+I Q+L H R+ QDVLD RVLH F L
Sbjct: 127 LLHLDYPCAHELLGLLLHAGVLEMLLRSLGILLEINQHLPHHRVRQDVLDFRVLHSFALX 306
Query: 359 LFQFLLTEFASARLGDLFNTPPYTIK*LLVFRXML*ASLISF 484
L QFL E AS RL DL NT YTI+ LLV R ML A LISF
Sbjct: 307 LLQFLRGELASVRLVDLLNTSLYTIEQLLVTRIMLQAXLISF 432
Score = 110 bits (235), Expect(2) = 2e-039
Identities = 42/55 (76%), Positives = 47/55 (85%)
Frame = +3 / +2
Query: 171 ATVYFI*TIPALTSFWIFCITPGFLRCACAARGFSCRSVKTCCMIGSVRMFWISG 335
A VYFI TIPALTSFW+FC TPGFLRC+CAA GFS +S+ TC + GSVRMFWISG
Sbjct: 119 ALVYFIWTIPALTSFWVFCFTPGFLRCSCAALGFSWKSINTCRITGSVRMFWISG 283
Score = 76.2 bits (160), Expect(2) = 2e-029
Identities = 38/58 (65%), Positives = 43/58 (74%)
Frame = -2 / -1
Query: 486 WKLIKLA*SMXRKTRSYLMV*GGVLNRSPRRAEANSVRRN*KRDRTKPCKTLRSRTS* 313
WKLI A*SM R TRS MV* V +RS RR EA+S RRN*+R R K C+TL+SRTS*
Sbjct: 434 WKLIXKA*SMIRVTRSCSMV*RDVFSRSTRRTEASSPRRN*RRXRAKLCRTLKSRTS* 261
Score = 72.1 bits (151), Expect(2) = 2e-029
Identities = 30/43 (69%), Positives = 33/43 (76%)
Frame = -3 / -2
Query: 299 AAGFDGSAGEPSGCAGAPQEPRSDAEDPEARQRRDSSDEVDGG 171
AAG D GE GCAGA QEPR +A+DPEAR+RRDS DEVD G
Sbjct: 247 AAGVD*FPGESQGCAGASQEPRREAKDPEARERRDSPDEVDQG 119
Score = 71.2 bits (149), Expect(2) = 2e-039
Identities = 29/47 (61%), Positives = 33/47 (70%)
Frame = +1 / +3
Query: 346 LCSVSLSVPPH*VRLCSPW*SVQHTSLHHQVTPGFSGHALGQLDKFP 486
LC S SVPP * RLCSP *S ++ SLHH+ PG+S HA G DKFP
Sbjct: 294 LCPXSPSVPPG*ARLCSPC*SAEYISLHHRAAPGYSDHASGLXDKFP 434
>gb|AW982381.2|AW982381 HVSMEg0003B23f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0003B23f, mRNA sequence
Length = 1024
Score = 193 bits (416), Expect = 5e-049
Identities = 79/108 (73%), Positives = 97/108 (89%)
Frame = -1 / +3
Query: 487 LETYQAGLKHXPKNQELLDGVRRCVEQITKASRGELSEEELKERQNKAMQDPEIQNILTD 308
+ETYQAGLK P NQELLDG+RRCV+QI KA+RG++S+E+L+E+Q+KAMQDPEIQNILTD
Sbjct: 204 METYQAGLKLDPNNQELLDGIRRCVQQINKANRGDISQEDLQEKQSKAMQDPEIQNILTD 383
Query: 307 PIMQQVLTDLQENPRAAQAHLKNPGVMQKIQKLVSAGIVQMK*TVAGM 164
PIM+QVL D QENPRAAQ HLK+PGV QKIQKL++AGIVQ +*+ G+
Sbjct: 384 PIMRQVLMDFQENPRAAQDHLKDPGVAQKIQKLINAGIVQTR*SSKGV 527
Score = 121 bits (259), Expect = 2e-027
Identities = 59/99 (59%), Positives = 66/99 (66%)
Frame = +2 / -3
Query: 188 LNYPCADELLDLLHHSGVLEVRLRSPRVLLQIRQNLLHDRISQDVLDLRVLHGFVLSLFQ 367
L+Y ELLDLL HS VL++ L SPRVLL+I Q+L HDRI +DVLD VLH F L L Q
Sbjct: 503 LDYSSVYELLDLLCHSRVLQMILSSPRVLLEIHQHLSHDRIGKDVLDFWVLHSFTLFLLQ 324
Query: 368 FLLTEFASARLGDLFNTPPYTIK*LLVFRXML*ASLISF 484
LLT L DL NTPPY IK LV R L* SL+SF
Sbjct: 323 ILLTYVTPVGLVDLLNTPPYAIKQFLVIRVKL*PSLVSF 207
Score = 84.9 bits (179), Expect(2) = 6e-026
Identities = 35/56 (62%), Positives = 40/56 (71%)
Frame = +3 / -1
Query: 168 PATVYFI*TIPALTSFWIFCITPGFLRCACAARGFSCRSVKTCCMIGSVRMFWISG 335
P + + TIPA SFWIFC TPG R + AA GFS +S+ TC MIGSVRMFWISG
Sbjct: 523 PLLDHLVWTIPAFMSFWIFCATPGSFR*S*AALGFSWKSINTCRMIGSVRMFWISG 356
Score = 51.5 bits (106), Expect(2) = 6e-026
Identities = 25/47 (53%), Positives = 28/47 (59%)
Frame = +1 / -2
Query: 346 LCSVSLSVPPH*VRLCSPW*SVQHTSLHHQVTPGFSGHALGQLDKFP 486
L SVS + PP C P *S +HTSL HQ PG+ G AL Q KFP
Sbjct: 345 LYSVSPANPPDLCHPCWPC*SAEHTSLCHQAVPGY*GQALTQPGKFP 205
>gb|AV917985.1|AV917985 AV917985 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags17f05 3', mRNA sequence
Length = 599
Score = 193 bits (416), Expect = 5e-049
Identities = 79/108 (73%), Positives = 97/108 (89%)
Frame = -1 / -3
Query: 487 LETYQAGLKHXPKNQELLDGVRRCVEQITKASRGELSEEELKERQNKAMQDPEIQNILTD 308
+ETYQAGLK P NQELLDG+RRCV+QI KA+RG++S+E+L+E+Q+KAMQDPEIQNILTD
Sbjct: 435 METYQAGLKLDPNNQELLDGIRRCVQQINKANRGDISQEDLQEKQSKAMQDPEIQNILTD 256
Query: 307 PIMQQVLTDLQENPRAAQAHLKNPGVMQKIQKLVSAGIVQMK*TVAGM 164
PIM+QVL D QENPRAAQ HLK+PGV QKIQKL++AGIVQ +*+ G+
Sbjct: 255 PIMRQVLMDFQENPRAAQDHLKDPGVAQKIQKLINAGIVQTR*SSKGV 112
Score = 122 bits (260), Expect = 2e-027
Identities = 59/99 (59%), Positives = 66/99 (66%)
Frame = +2 / +1
Query: 188 LNYPCADELLDLLHHSGVLEVRLRSPRVLLQIRQNLLHDRISQDVLDLRVLHGFVLSLFQ 367
L+Y ELLDLL HS VL++ L SPRVLL+I Q+L HDRI +DVLD VLH F L L Q
Sbjct: 136 LDYSSVYELLDLLCHSRVLQMILSSPRVLLEIHQHLSHDRIGKDVLDFWVLHSFTLFLLQ 315
Query: 368 FLLTEFASARLGDLFNTPPYTIK*LLVFRXML*ASLISF 484
LLT L DL NTPPY IK LV R L* SL+SF
Sbjct: 316 ILLTYVTPVSLVDLLNTPPYAIKQFLVIRVKL*PSLVSF 432
Score = 84.9 bits (179), Expect(2) = 9e-026
Identities = 35/56 (62%), Positives = 40/56 (71%)
Frame = +3 / +2
Query: 168 PATVYFI*TIPALTSFWIFCITPGFLRCACAARGFSCRSVKTCCMIGSVRMFWISG 335
P + + TIPA SFWIFC TPG R + AA GFS +S+ TC MIGSVRMFWISG
Sbjct: 116 PLLDHLVWTIPAFMSFWIFCATPGSFR*S*AALGFSWKSINTCRMIGSVRMFWISG 283
Score = 51.0 bits (105), Expect(2) = 9e-026
Identities = 25/47 (53%), Positives = 28/47 (59%)
Frame = +1 / +3
Query: 346 LCSVSLSVPPH*VRLCSPW*SVQHTSLHHQVTPGFSGHALGQLDKFP 486
L SVS + PP C P *S +HTSL HQ PG+ G AL Q KFP
Sbjct: 294 LYSVSPANPPDLCHPC*PC*SAEHTSLCHQAVPGY*GQALTQPGKFP 434
>gb|AV921401.1|AV921401 AV921401 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags23f01 3', mRNA sequence
Length = 663
Score = 193 bits (416), Expect = 5e-049
Identities = 79/108 (73%), Positives = 97/108 (89%)
Frame = -1 / -1
Query: 487 LETYQAGLKHXPKNQELLDGVRRCVEQITKASRGELSEEELKERQNKAMQDPEIQNILTD 308
+ETYQAGLK P NQELLDG+RRCV+QI KA+RG++S+E+L+E+Q+KAMQDPEIQNILTD
Sbjct: 411 METYQAGLKLDPNNQELLDGIRRCVQQINKANRGDISQEDLQEKQSKAMQDPEIQNILTD 232
Query: 307 PIMQQVLTDLQENPRAAQAHLKNPGVMQKIQKLVSAGIVQMK*TVAGM 164
PIM+QVL D QENPRAAQ HLK+PGV QKIQKL++AGIVQ +*+ G+
Sbjct: 231 PIMRQVLMDFQENPRAAQDHLKDPGVAQKIQKLINAGIVQTR*SSKGV 88
Score = 122 bits (260), Expect = 2e-027
Identities = 59/99 (59%), Positives = 66/99 (66%)
Frame = +2 / +1
Query: 188 LNYPCADELLDLLHHSGVLEVRLRSPRVLLQIRQNLLHDRISQDVLDLRVLHGFVLSLFQ 367
L+Y ELLDLL HS VL++ L SPRVLL+I Q+L HDRI +DVLD VLH F L L Q
Sbjct: 112 LDYSSVYELLDLLCHSRVLQMILSSPRVLLEIHQHLSHDRIGKDVLDFWVLHSFTLFLLQ 291
Query: 368 FLLTEFASARLGDLFNTPPYTIK*LLVFRXML*ASLISF 484
LLT L DL NTPPY IK LV R L* SL+SF
Sbjct: 292 ILLTYVTPVSLVDLLNTPPYAIKQFLVIRVKL*PSLVSF 408
Score = 84.9 bits (179), Expect(2) = 9e-026
Identities = 35/56 (62%), Positives = 40/56 (71%)
Frame = +3 / +2
Query: 168 PATVYFI*TIPALTSFWIFCITPGFLRCACAARGFSCRSVKTCCMIGSVRMFWISG 335
P + + TIPA SFWIFC TPG R + AA GFS +S+ TC MIGSVRMFWISG
Sbjct: 92 PLLDHLVWTIPAFMSFWIFCATPGSFR*S*AALGFSWKSINTCRMIGSVRMFWISG 259
Score = 51.0 bits (105), Expect(2) = 9e-026
Identities = 25/47 (53%), Positives = 28/47 (59%)
Frame = +1 / +3
Query: 346 LCSVSLSVPPH*VRLCSPW*SVQHTSLHHQVTPGFSGHALGQLDKFP 486
L SVS + PP C P *S +HTSL HQ PG+ G AL Q KFP
Sbjct: 270 LYSVSPANPPDLCHPC*PC*SAEHTSLCHQAVPGY*GQALTQPGKFP 410
>gb|BJ468316.1|BJ468316 BJ468316 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags38c23 3', mRNA sequence
Length = 704
Score = 193 bits (416), Expect = 5e-049
Identities = 79/108 (73%), Positives = 97/108 (89%)
Frame = -1 / -2
Query: 487 LETYQAGLKHXPKNQELLDGVRRCVEQITKASRGELSEEELKERQNKAMQDPEIQNILTD 308
+ETYQAGLK P NQELLDG+RRCV+QI KA+RG++S+E+L+E+Q+KAMQDPEIQNILTD
Sbjct: 625 METYQAGLKLDPNNQELLDGIRRCVQQINKANRGDISQEDLQEKQSKAMQDPEIQNILTD 446
Query: 307 PIMQQVLTDLQENPRAAQAHLKNPGVMQKIQKLVSAGIVQMK*TVAGM 164
PIM+QVL D QENPRAAQ HLK+PGV QKIQKL++AGIVQ +*+ G+
Sbjct: 445 PIMRQVLMDFQENPRAAQDHLKDPGVAQKIQKLINAGIVQTR*SSKGV 302
Score = 122 bits (260), Expect = 2e-027
Identities = 59/99 (59%), Positives = 66/99 (66%)
Frame = +2 / +2
Query: 188 LNYPCADELLDLLHHSGVLEVRLRSPRVLLQIRQNLLHDRISQDVLDLRVLHGFVLSLFQ 367
L+Y ELLDLL HS VL++ L SPRVLL+I Q+L HDRI +DVLD VLH F L L Q
Sbjct: 326 LDYSSVYELLDLLCHSRVLQMILSSPRVLLEIHQHLSHDRIGKDVLDFWVLHSFTLFLLQ 505
Query: 368 FLLTEFASARLGDLFNTPPYTIK*LLVFRXML*ASLISF 484
LLT L DL NTPPY IK LV R L* SL+SF
Sbjct: 506 ILLTYVTPVSLVDLLNTPPYAIKQFLVIRVKL*PSLVSF 622
Score = 84.9 bits (179), Expect(2) = 9e-026
Identities = 35/56 (62%), Positives = 40/56 (71%)
Frame = +3 / +3
Query: 168 PATVYFI*TIPALTSFWIFCITPGFLRCACAARGFSCRSVKTCCMIGSVRMFWISG 335
P + + TIPA SFWIFC TPG R + AA GFS +S+ TC MIGSVRMFWISG
Sbjct: 306 PLLDHLVWTIPAFMSFWIFCATPGSFR*S*AALGFSWKSINTCRMIGSVRMFWISG 473
Score = 51.0 bits (105), Expect(2) = 9e-026
Identities = 25/47 (53%), Positives = 28/47 (59%)
Frame = +1 / +1
Query: 346 LCSVSLSVPPH*VRLCSPW*SVQHTSLHHQVTPGFSGHALGQLDKFP 486
L SVS + PP C P *S +HTSL HQ PG+ G AL Q KFP
Sbjct: 484 LYSVSPANPPDLCHPC*PC*SAEHTSLCHQAVPGY*GQALTQPGKFP 624
>gb|BJ468417.1|BJ468417 BJ468417 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags38l14 3', mRNA sequence
Length = 680
Score = 193 bits (416), Expect = 5e-049
Identities = 79/108 (73%), Positives = 97/108 (89%)
Frame = -1 / -1
Query: 487 LETYQAGLKHXPKNQELLDGVRRCVEQITKASRGELSEEELKERQNKAMQDPEIQNILTD 308
+ETYQAGLK P NQELLDG+RRCV+QI KA+RG++S+E+L+E+Q+KAMQDPEIQNILTD
Sbjct: 623 METYQAGLKLDPNNQELLDGIRRCVQQINKANRGDISQEDLQEKQSKAMQDPEIQNILTD 444
Query: 307 PIMQQVLTDLQENPRAAQAHLKNPGVMQKIQKLVSAGIVQMK*TVAGM 164
PIM+QVL D QENPRAAQ HLK+PGV QKIQKL++AGIVQ +*+ G+
Sbjct: 443 PIMRQVLMDFQENPRAAQDHLKDPGVAQKIQKLINAGIVQTR*SSKGV 300
Score = 122 bits (260), Expect = 2e-027
Identities = 59/99 (59%), Positives = 66/99 (66%)
Frame = +2 / +3
Query: 188 LNYPCADELLDLLHHSGVLEVRLRSPRVLLQIRQNLLHDRISQDVLDLRVLHGFVLSLFQ 367
L+Y ELLDLL HS VL++ L SPRVLL+I Q+L HDRI +DVLD VLH F L L Q
Sbjct: 324 LDYSSVYELLDLLCHSRVLQMILSSPRVLLEIHQHLSHDRIGKDVLDFWVLHSFTLFLLQ 503
Query: 368 FLLTEFASARLGDLFNTPPYTIK*LLVFRXML*ASLISF 484
LLT L DL NTPPY IK LV R L* SL+SF
Sbjct: 504 ILLTYVTPVSLVDLLNTPPYAIKQFLVIRVKL*PSLVSF 620
Score = 84.9 bits (179), Expect(2) = 9e-026
Identities = 35/56 (62%), Positives = 40/56 (71%)
Frame = +3 / +1
Query: 168 PATVYFI*TIPALTSFWIFCITPGFLRCACAARGFSCRSVKTCCMIGSVRMFWISG 335
P + + TIPA SFWIFC TPG R + AA GFS +S+ TC MIGSVRMFWISG
Sbjct: 304 PLLDHLVWTIPAFMSFWIFCATPGSFR*S*AALGFSWKSINTCRMIGSVRMFWISG 471
Score = 51.0 bits (105), Expect(2) = 9e-026
Identities = 25/47 (53%), Positives = 28/47 (59%)
Frame = +1 / +2
Query: 346 LCSVSLSVPPH*VRLCSPW*SVQHTSLHHQVTPGFSGHALGQLDKFP 486
L SVS + PP C P *S +HTSL HQ PG+ G AL Q KFP
Sbjct: 482 LYSVSPANPPDLCHPC*PC*SAEHTSLCHQAVPGY*GQALTQPGKFP 622
>gb|BQ464281.1|BQ464281 HF01N09T HF Hordeum vulgare subsp. vulgare cDNA clone HF01N09
5-PRIME, mRNA sequence
Length = 631
Score = 193 bits (416), Expect = 5e-049
Identities = 79/108 (73%), Positives = 97/108 (89%)
Frame = -1 / +3
Query: 487 LETYQAGLKHXPKNQELLDGVRRCVEQITKASRGELSEEELKERQNKAMQDPEIQNILTD 308
+ETYQAGLK P NQELLDG+RRCV+QI KA+RG++S+E+L+E+Q+KAMQDPEIQNILTD
Sbjct: 126 METYQAGLKLDPNNQELLDGIRRCVQQINKANRGDISQEDLQEKQSKAMQDPEIQNILTD 305
Query: 307 PIMQQVLTDLQENPRAAQAHLKNPGVMQKIQKLVSAGIVQMK*TVAGM 164
PIM+QVL D QENPRAAQ HLK+PGV QKIQKL++AGIVQ +*+ G+
Sbjct: 306 PIMRQVLMDFQENPRAAQDHLKDPGVAQKIQKLINAGIVQTR*SSKGV 449
Score = 122 bits (260), Expect = 2e-027
Identities = 59/99 (59%), Positives = 66/99 (66%)
Frame = +2 / -3
Query: 188 LNYPCADELLDLLHHSGVLEVRLRSPRVLLQIRQNLLHDRISQDVLDLRVLHGFVLSLFQ 367
L+Y ELLDLL HS VL++ L SPRVLL+I Q+L HDRI +DVLD VLH F L L Q
Sbjct: 425 LDYSSVYELLDLLCHSRVLQMILSSPRVLLEIHQHLSHDRIGKDVLDFWVLHSFTLFLLQ 246
Query: 368 FLLTEFASARLGDLFNTPPYTIK*LLVFRXML*ASLISF 484
LLT L DL NTPPY IK LV R L* SL+SF
Sbjct: 245 ILLTYVTPVSLVDLLNTPPYAIKQFLVIRVKL*PSLVSF 129
Score = 84.9 bits (179), Expect(2) = 9e-026
Identities = 35/56 (62%), Positives = 40/56 (71%)
Frame = +3 / -1
Query: 168 PATVYFI*TIPALTSFWIFCITPGFLRCACAARGFSCRSVKTCCMIGSVRMFWISG 335
P + + TIPA SFWIFC TPG R + AA GFS +S+ TC MIGSVRMFWISG
Sbjct: 445 PLLDHLVWTIPAFMSFWIFCATPGSFR*S*AALGFSWKSINTCRMIGSVRMFWISG 278
Score = 51.0 bits (105), Expect(2) = 9e-026
Identities = 25/47 (53%), Positives = 28/47 (59%)
Frame = +1 / -2
Query: 346 LCSVSLSVPPH*VRLCSPW*SVQHTSLHHQVTPGFSGHALGQLDKFP 486
L SVS + PP C P *S +HTSL HQ PG+ G AL Q KFP
Sbjct: 267 LYSVSPANPPDLCHPC*PC*SAEHTSLCHQAVPGY*GQALTQPGKFP 127
>gb|BU987175.1|BU987175 HF14A05r HF Hordeum vulgare subsp. vulgare cDNA clone HF14A05
5-PRIME, mRNA sequence
Length = 629
Score = 193 bits (416), Expect = 5e-049
Identities = 79/108 (73%), Positives = 97/108 (89%)
Frame = -1 / +3
Query: 487 LETYQAGLKHXPKNQELLDGVRRCVEQITKASRGELSEEELKERQNKAMQDPEIQNILTD 308
+ETYQAGLK P NQELLDG+RRCV+QI KA+RG++S+E+L+E+Q+KAMQDPEIQNILTD
Sbjct: 126 METYQAGLKLDPNNQELLDGIRRCVQQINKANRGDISQEDLQEKQSKAMQDPEIQNILTD 305
Query: 307 PIMQQVLTDLQENPRAAQAHLKNPGVMQKIQKLVSAGIVQMK*TVAGM 164
PIM+QVL D QENPRAAQ HLK+PGV QKIQKL++AGIVQ +*+ G+
Sbjct: 306 PIMRQVLMDFQENPRAAQDHLKDPGVAQKIQKLINAGIVQTR*SSKGV 449
Score = 122 bits (260), Expect = 2e-027
Identities = 59/99 (59%), Positives = 66/99 (66%)
Frame = +2 / -1
Query: 188 LNYPCADELLDLLHHSGVLEVRLRSPRVLLQIRQNLLHDRISQDVLDLRVLHGFVLSLFQ 367
L+Y ELLDLL HS VL++ L SPRVLL+I Q+L HDRI +DVLD VLH F L L Q
Sbjct: 425 LDYSSVYELLDLLCHSRVLQMILSSPRVLLEIHQHLSHDRIGKDVLDFWVLHSFTLFLLQ 246
Query: 368 FLLTEFASARLGDLFNTPPYTIK*LLVFRXML*ASLISF 484
LLT L DL NTPPY IK LV R L* SL+SF
Sbjct: 245 ILLTYVTPVSLVDLLNTPPYAIKQFLVIRVKL*PSLVSF 129
Score = 84.9 bits (179), Expect(2) = 9e-026
Identities = 35/56 (62%), Positives = 40/56 (71%)
Frame = +3 / -2
Query: 168 PATVYFI*TIPALTSFWIFCITPGFLRCACAARGFSCRSVKTCCMIGSVRMFWISG 335
P + + TIPA SFWIFC TPG R + AA GFS +S+ TC MIGSVRMFWISG
Sbjct: 445 PLLDHLVWTIPAFMSFWIFCATPGSFR*S*AALGFSWKSINTCRMIGSVRMFWISG 278
Score = 51.0 bits (105), Expect(2) = 9e-026
Identities = 25/47 (53%), Positives = 28/47 (59%)
Frame = +1 / -3
Query: 346 LCSVSLSVPPH*VRLCSPW*SVQHTSLHHQVTPGFSGHALGQLDKFP 486
L SVS + PP C P *S +HTSL HQ PG+ G AL Q KFP
Sbjct: 267 LYSVSPANPPDLCHPC*PC*SAEHTSLCHQAVPGY*GQALTQPGKFP 127
>gb|CK122738.1|CK122738 BES1824105j24 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010J245 5-PRIME, mRNA sequence
Length = 793
Score = 193 bits (416), Expect = 5e-049
Identities = 79/108 (73%), Positives = 97/108 (89%)
Frame = -1 / +1
Query: 487 LETYQAGLKHXPKNQELLDGVRRCVEQITKASRGELSEEELKERQNKAMQDPEIQNILTD 308
+ETYQAGLK P NQELLDG+RRCV+QI KA+RG++S+E+L+E+Q+KAMQDPEIQNILTD
Sbjct: 418 METYQAGLKLDPNNQELLDGIRRCVQQINKANRGDISQEDLQEKQSKAMQDPEIQNILTD 597
Query: 307 PIMQQVLTDLQENPRAAQAHLKNPGVMQKIQKLVSAGIVQMK*TVAGM 164
PIM+QVL D QENPRAAQ HLK+PGV QKIQKL++AGIVQ +*+ G+
Sbjct: 598 PIMRQVLMDFQENPRAAQDHLKDPGVAQKIQKLINAGIVQTR*SSKGV 741
Score = 122 bits (260), Expect = 2e-027
Identities = 59/99 (59%), Positives = 66/99 (66%)
Frame = +2 / -2
Query: 188 LNYPCADELLDLLHHSGVLEVRLRSPRVLLQIRQNLLHDRISQDVLDLRVLHGFVLSLFQ 367
L+Y ELLDLL HS VL++ L SPRVLL+I Q+L HDRI +DVLD VLH F L L Q
Sbjct: 717 LDYSSVYELLDLLCHSRVLQMILSSPRVLLEIHQHLSHDRIGKDVLDFWVLHSFTLFLLQ 538
Query: 368 FLLTEFASARLGDLFNTPPYTIK*LLVFRXML*ASLISF 484
LLT L DL NTPPY IK LV R L* SL+SF
Sbjct: 537 ILLTYVTPVSLVDLLNTPPYAIKQFLVIRVKL*PSLVSF 421
Score = 84.9 bits (179), Expect(2) = 9e-026
Identities = 35/56 (62%), Positives = 40/56 (71%)
Frame = +3 / -3
Query: 168 PATVYFI*TIPALTSFWIFCITPGFLRCACAARGFSCRSVKTCCMIGSVRMFWISG 335
P + + TIPA SFWIFC TPG R + AA GFS +S+ TC MIGSVRMFWISG
Sbjct: 737 PLLDHLVWTIPAFMSFWIFCATPGSFR*S*AALGFSWKSINTCRMIGSVRMFWISG 570
Score = 51.0 bits (105), Expect(2) = 9e-026
Identities = 25/47 (53%), Positives = 28/47 (59%)
Frame = +1 / -1
Query: 346 LCSVSLSVPPH*VRLCSPW*SVQHTSLHHQVTPGFSGHALGQLDKFP 486
L SVS + PP C P *S +HTSL HQ PG+ G AL Q KFP
Sbjct: 559 LYSVSPANPPDLCHPC*PC*SAEHTSLCHQAVPGY*GQALTQPGKFP 419
>gb|CK123682.1|CK123682 BES1824105b08 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010B085 5-PRIME, mRNA sequence
Length = 744
Score = 193 bits (416), Expect = 5e-049
Identities = 79/108 (73%), Positives = 97/108 (89%)
Frame = -1 / +1
Query: 487 LETYQAGLKHXPKNQELLDGVRRCVEQITKASRGELSEEELKERQNKAMQDPEIQNILTD 308
+ETYQAGLK P NQELLDG+RRCV+QI KA+RG++S+E+L+E+Q+KAMQDPEIQNILTD
Sbjct: 418 METYQAGLKLDPNNQELLDGIRRCVQQINKANRGDISQEDLQEKQSKAMQDPEIQNILTD 597
Query: 307 PIMQQVLTDLQENPRAAQAHLKNPGVMQKIQKLVSAGIVQMK*TVAGM 164
PIM+QVL D QENPRAAQ HLK+PGV QKIQKL++AGIVQ +*+ G+
Sbjct: 598 PIMRQVLMDFQENPRAAQDHLKDPGVAQKIQKLINAGIVQTR*SSKGV 741
Score = 122 bits (260), Expect = 2e-027
Identities = 59/99 (59%), Positives = 66/99 (66%)
Frame = +2 / -1
Query: 188 LNYPCADELLDLLHHSGVLEVRLRSPRVLLQIRQNLLHDRISQDVLDLRVLHGFVLSLFQ 367
L+Y ELLDLL HS VL++ L SPRVLL+I Q+L HDRI +DVLD VLH F L L Q
Sbjct: 717 LDYSSVYELLDLLCHSRVLQMILSSPRVLLEIHQHLSHDRIGKDVLDFWVLHSFTLFLLQ 538
Query: 368 FLLTEFASARLGDLFNTPPYTIK*LLVFRXML*ASLISF 484
LLT L DL NTPPY IK LV R L* SL+SF
Sbjct: 537 ILLTYVTPVSLVDLLNTPPYAIKQFLVIRVKL*PSLVSF 421
Score = 84.9 bits (179), Expect(2) = 9e-026
Identities = 35/56 (62%), Positives = 40/56 (71%)
Frame = +3 / -2
Query: 168 PATVYFI*TIPALTSFWIFCITPGFLRCACAARGFSCRSVKTCCMIGSVRMFWISG 335
P + + TIPA SFWIFC TPG R + AA GFS +S+ TC MIGSVRMFWISG
Sbjct: 737 PLLDHLVWTIPAFMSFWIFCATPGSFR*S*AALGFSWKSINTCRMIGSVRMFWISG 570
Score = 51.0 bits (105), Expect(2) = 9e-026
Identities = 25/47 (53%), Positives = 28/47 (59%)
Frame = +1 / -3
Query: 346 LCSVSLSVPPH*VRLCSPW*SVQHTSLHHQVTPGFSGHALGQLDKFP 486
L SVS + PP C P *S +HTSL HQ PG+ G AL Q KFP
Sbjct: 559 LYSVSPANPPDLCHPC*PC*SAEHTSLCHQAVPGY*GQALTQPGKFP 419
>gb|CK125898.1|CK125898 BES1824111B1f01 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010F0111 5-PRIME, mRNA sequence
Length = 877
Score = 193 bits (416), Expect = 5e-049
Identities = 79/108 (73%), Positives = 97/108 (89%)
Frame = -1 / +1
Query: 487 LETYQAGLKHXPKNQELLDGVRRCVEQITKASRGELSEEELKERQNKAMQDPEIQNILTD 308
+ETYQAGLK P NQELLDG+RRCV+QI KA+RG++S+E+L+E+Q+KAMQDPEIQNILTD
Sbjct: 382 METYQAGLKLDPNNQELLDGIRRCVQQINKANRGDISQEDLQEKQSKAMQDPEIQNILTD 561
Query: 307 PIMQQVLTDLQENPRAAQAHLKNPGVMQKIQKLVSAGIVQMK*TVAGM 164
PIM+QVL D QENPRAAQ HLK+PGV QKIQKL++AGIVQ +*+ G+
Sbjct: 562 PIMRQVLMDFQENPRAAQDHLKDPGVAQKIQKLINAGIVQTR*SSKGV 705
Score = 122 bits (260), Expect = 2e-027
Identities = 59/99 (59%), Positives = 66/99 (66%)
Frame = +2 / -2
Query: 188 LNYPCADELLDLLHHSGVLEVRLRSPRVLLQIRQNLLHDRISQDVLDLRVLHGFVLSLFQ 367
L+Y ELLDLL HS VL++ L SPRVLL+I Q+L HDRI +DVLD VLH F L L Q
Sbjct: 681 LDYSSVYELLDLLCHSRVLQMILSSPRVLLEIHQHLSHDRIGKDVLDFWVLHSFTLFLLQ 502
Query: 368 FLLTEFASARLGDLFNTPPYTIK*LLVFRXML*ASLISF 484
LLT L DL NTPPY IK LV R L* SL+SF
Sbjct: 501 ILLTYVTPVSLVDLLNTPPYAIKQFLVIRVKL*PSLVSF 385
Score = 84.9 bits (179), Expect(2) = 9e-026
Identities = 35/56 (62%), Positives = 40/56 (71%)
Frame = +3 / -3
Query: 168 PATVYFI*TIPALTSFWIFCITPGFLRCACAARGFSCRSVKTCCMIGSVRMFWISG 335
P + + TIPA SFWIFC TPG R + AA GFS +S+ TC MIGSVRMFWISG
Sbjct: 701 PLLDHLVWTIPAFMSFWIFCATPGSFR*S*AALGFSWKSINTCRMIGSVRMFWISG 534
Score = 51.0 bits (105), Expect(2) = 9e-026
Identities = 25/47 (53%), Positives = 28/47 (59%)
Frame = +1 / -1
Query: 346 LCSVSLSVPPH*VRLCSPW*SVQHTSLHHQVTPGFSGHALGQLDKFP 486
L SVS + PP C P *S +HTSL HQ PG+ G AL Q KFP
Sbjct: 523 LYSVSPANPPDLCHPC*PC*SAEHTSLCHQAVPGY*GQALTQPGKFP 383
>gb|BM372544.2|BM372544 EBpi05_SQ003_E07_R pistil, 8 DPA, no treatment, cv Optic, EBpi05
Hordeum vulgare subsp. vulgare cDNA clone
EBpi05_SQ003_E07 5', mRNA sequence
Length = 620
Score = 193 bits (415), Expect = 7e-049
Identities = 79/107 (73%), Positives = 96/107 (89%)
Frame = -1 / +1
Query: 487 LETYQAGLKHXPKNQELLDGVRRCVEQITKASRGELSEEELKERQNKAMQDPEIQNILTD 308
+ETYQAGLK P NQELLDG+RRCV+QI KA+RG++S+E+L+E+Q+KAMQDPEIQNILTD
Sbjct: 136 METYQAGLKLDPNNQELLDGIRRCVQQINKANRGDISQEDLQEKQSKAMQDPEIQNILTD 315
Query: 307 PIMQQVLTDLQENPRAAQAHLKNPGVMQKIQKLVSAGIVQMK*TVAG 167
PIM+QVL D QENPRAAQ HLK+PGV QKIQKL++AGIVQ +*+ G
Sbjct: 316 PIMRQVLMDFQENPRAAQDHLKDPGVAQKIQKLINAGIVQTR*SSKG 456
Score = 122 bits (260), Expect = 2e-027
Identities = 59/99 (59%), Positives = 66/99 (66%)
Frame = +2 / -3
Query: 188 LNYPCADELLDLLHHSGVLEVRLRSPRVLLQIRQNLLHDRISQDVLDLRVLHGFVLSLFQ 367
L+Y ELLDLL HS VL++ L SPRVLL+I Q+L HDRI +DVLD VLH F L L Q
Sbjct: 435 LDYSSVYELLDLLCHSRVLQMILSSPRVLLEIHQHLSHDRIGKDVLDFWVLHSFTLFLLQ 256
Query: 368 FLLTEFASARLGDLFNTPPYTIK*LLVFRXML*ASLISF 484
LLT L DL NTPPY IK LV R L* SL+SF
Sbjct: 255 ILLTYVTPVSLVDLLNTPPYAIKQFLVIRVKL*PSLVSF 139
Score = 84.9 bits (179), Expect(2) = 9e-026
Identities = 35/56 (62%), Positives = 40/56 (71%)
Frame = +3 / -1
Query: 168 PATVYFI*TIPALTSFWIFCITPGFLRCACAARGFSCRSVKTCCMIGSVRMFWISG 335
P + + TIPA SFWIFC TPG R + AA GFS +S+ TC MIGSVRMFWISG
Sbjct: 455 PLLDHLVWTIPAFMSFWIFCATPGSFR*S*AALGFSWKSINTCRMIGSVRMFWISG 288
Score = 51.0 bits (105), Expect(2) = 9e-026
Identities = 25/47 (53%), Positives = 28/47 (59%)
Frame = +1 / -2
Query: 346 LCSVSLSVPPH*VRLCSPW*SVQHTSLHHQVTPGFSGHALGQLDKFP 486
L SVS + PP C P *S +HTSL HQ PG+ G AL Q KFP
Sbjct: 277 LYSVSPANPPDLCHPC*PC*SAEHTSLCHQAVPGY*GQALTQPGKFP 137
>gb|AW982510.3|AW982510 HVSMEg0003H10f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0003H10f, mRNA sequence
Length = 562
Score = 190 bits (410), Expect = 4e-048
Identities = 78/108 (72%), Positives = 96/108 (88%)
Frame = -1 / +3
Query: 487 LETYQAGLKHXPKNQELLDGVRRCVEQITKASRGELSEEELKERQNKAMQDPEIQNILTD 308
+ETYQAGLK P NQELLDG+RRCV+QI KA+RG++S+E+L+E+Q+KAMQDPEIQNILTD
Sbjct: 171 METYQAGLKLDPNNQELLDGIRRCVQQINKANRGDISQEDLQEKQSKAMQDPEIQNILTD 350
Query: 307 PIMQQVLTDLQENPRAAQAHLKNPGVMQKIQKLVSAGIVQMK*TVAGM 164
PIM+QVL D QENP AAQ HLK+PGV QKIQKL++AGIVQ +*+ G+
Sbjct: 351 PIMRQVLMDFQENPMAAQDHLKDPGVAQKIQKLINAGIVQTR*SSKGV 494
Score = 117 bits (250), Expect = 4e-026
Identities = 58/99 (58%), Positives = 65/99 (65%)
Frame = +2 / -3
Query: 188 LNYPCADELLDLLHHSGVLEVRLRSPRVLLQIRQNLLHDRISQDVLDLRVLHGFVLSLFQ 367
L+Y ELLDLL HS VL++ L S RVLL+I Q+L HDRI +DVLD VLH F L L Q
Sbjct: 470 LDYSSVYELLDLLCHSRVLQMILSSHRVLLEIHQHLSHDRIGKDVLDFWVLHSFTLFLLQ 291
Query: 368 FLLTEFASARLGDLFNTPPYTIK*LLVFRXML*ASLISF 484
LLT L DL NTPPY IK LV R L* SL+SF
Sbjct: 290 ILLTYVTPVGLVDLLNTPPYAIKQFLVIRVKL*PSLVSF 174
Score = 84.5 bits (178), Expect(2) = 9e-026
Identities = 35/56 (62%), Positives = 40/56 (71%)
Frame = +3 / -1
Query: 168 PATVYFI*TIPALTSFWIFCITPGFLRCACAARGFSCRSVKTCCMIGSVRMFWISG 335
P + + TIPA SFWIFC TPG R + AA GFS +S+ TC MIGSVRMFWISG
Sbjct: 490 PLLDHLVWTIPAFMSFWIFCATPGSFR*S*AAIGFSWKSINTCRMIGSVRMFWISG 323
Score = 51.5 bits (106), Expect(2) = 9e-026
Identities = 25/47 (53%), Positives = 28/47 (59%)
Frame = +1 / -2
Query: 346 LCSVSLSVPPH*VRLCSPW*SVQHTSLHHQVTPGFSGHALGQLDKFP 486
L SVS + PP C P *S +HTSL HQ PG+ G AL Q KFP
Sbjct: 312 LYSVSPANPPDLCHPCWPC*SAEHTSLCHQAVPGY*GQALTQPGKFP 172
>gb|AJ433069.1|AJ433069 AJ433069 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200051G02F1, mRNA sequence
Length = 543
Score = 190 bits (409), Expect = 5e-048
Identities = 78/106 (73%), Positives = 95/106 (89%)
Frame = -1 / +3
Query: 481 TYQAGLKHXPKNQELLDGVRRCVEQITKASRGELSEEELKERQNKAMQDPEIQNILTDPI 302
TYQAGLK P NQELLDG+RRCV+QI KA+RG++S+E+L+E+Q+KAMQDPEIQNILTDPI
Sbjct: 3 TYQAGLKLDPNNQELLDGIRRCVQQINKANRGDISQEDLQEKQSKAMQDPEIQNILTDPI 182
Query: 301 MQQVLTDLQENPRAAQAHLKNPGVMQKIQKLVSAGIVQMK*TVAGM 164
M+QVL D QENPRAAQ HLK+PGV QKIQKL++AGIVQ +*+ G+
Sbjct: 183 MRQVLMDFQENPRAAQDHLKDPGVAQKIQKLINAGIVQTR*SSKGV 320
Score = 119 bits (254), Expect = 1e-026
Identities = 58/98 (59%), Positives = 65/98 (66%)
Frame = +2 / -2
Query: 188 LNYPCADELLDLLHHSGVLEVRLRSPRVLLQIRQNLLHDRISQDVLDLRVLHGFVLSLFQ 367
L+Y ELLDLL HS VL++ L SPRVLL+I Q+L HDRI +DVLD VLH F L L Q
Sbjct: 296 LDYSSVYELLDLLCHSRVLQMILSSPRVLLEIHQHLSHDRIGKDVLDFWVLHSFTLFLLQ 117
Query: 368 FLLTEFASARLGDLFNTPPYTIK*LLVFRXML*ASLIS 481
LLT L DL NTPPY IK LV R L* SL+S
Sbjct: 116 ILLTYVTPVSLVDLLNTPPYAIKQFLVIRVKL*PSLVS 3
Score = 84.9 bits (179), Expect(2) = 8e-025
Identities = 35/56 (62%), Positives = 40/56 (71%)
Frame = +3 / -3
Query: 168 PATVYFI*TIPALTSFWIFCITPGFLRCACAARGFSCRSVKTCCMIGSVRMFWISG 335
P + + TIPA SFWIFC TPG R + AA GFS +S+ TC MIGSVRMFWISG
Sbjct: 316 PLLDHLVWTIPAFMSFWIFCATPGSFR*S*AALGFSWKSINTCRMIGSVRMFWISG 149
Score = 47.8 bits (98), Expect(2) = 8e-025
Identities = 24/46 (52%), Positives = 27/46 (58%)
Frame = +1 / -1
Query: 346 LCSVSLSVPPH*VRLCSPW*SVQHTSLHHQVTPGFSGHALGQLDKF 483
L SVS + PP C P *S +HTSL HQ PG+ G AL Q KF
Sbjct: 138 LYSVSPANPPDLCHPC*PC*SAEHTSLCHQAVPGY*GQALTQPGKF 1
>gb|BM372473.2|BM372473 EBpi05_SQ003_B02_R pistil, 8 DPA, no treatment, cv Optic, EBpi05
Hordeum vulgare subsp. vulgare cDNA clone
EBpi05_SQ003_B02 5', mRNA sequence
Length = 445
Score = 188 bits (405), Expect = 2e-047
Identities = 77/103 (74%), Positives = 93/103 (90%)
Frame = -1 / +1
Query: 487 LETYQAGLKHXPKNQELLDGVRRCVEQITKASRGELSEEELKERQNKAMQDPEIQNILTD 308
+ETYQAGLK P NQELLDG+RRCV+QI KA+RG++S+E+L+E+Q+KAMQDPEIQNILTD
Sbjct: 136 METYQAGLKLDPNNQELLDGIRRCVQQINKANRGDISQEDLQEKQSKAMQDPEIQNILTD 315
Query: 307 PIMQQVLTDLQENPRAAQAHLKNPGVMQKIQKLVSAGIVQMK* 179
PIM+QVL D QENP AAQ HLK+PGV QKIQKL++AGIVQ +*
Sbjct: 316 PIMRQVLMDFQENPXAAQDHLKDPGVAQKIQKLINAGIVQTR* 444
Score = 116 bits (247), Expect = 1e-025
Identities = 57/99 (57%), Positives = 64/99 (64%)
Frame = +2 / -2
Query: 188 LNYPCADELLDLLHHSGVLEVRLRSPRVLLQIRQNLLHDRISQDVLDLRVLHGFVLSLFQ 367
L+Y ELLDLL HS V ++ L S RVLL+I Q+L HDRI +DVLD VLH F L L Q
Sbjct: 435 LDYSSVYELLDLLCHSRVFQMILSSXRVLLEIHQHLSHDRIGKDVLDFWVLHSFTLFLLQ 256
Query: 368 FLLTEFASARLGDLFNTPPYTIK*LLVFRXML*ASLISF 484
LLT L DL NTPPY IK LV R L* SL+SF
Sbjct: 255 ILLTYVTPVSLVDLLNTPPYAIKQFLVIRVKL*PSLVSF 139
Score = 84.5 bits (178), Expect(2) = 9e-026
Identities = 34/52 (65%), Positives = 39/52 (75%)
Frame = +3 / -3
Query: 180 YFI*TIPALTSFWIFCITPGFLRCACAARGFSCRSVKTCCMIGSVRMFWISG 335
+ + TIPA SFWIFC TPG R + AA GFS +S+ TC MIGSVRMFWISG
Sbjct: 443 HLVWTIPAFMSFWIFCATPGSFR*S*AAXGFSWKSINTCRMIGSVRMFWISG 288
Score = 51.0 bits (105), Expect(2) = 9e-026
Identities = 25/47 (53%), Positives = 28/47 (59%)
Frame = +1 / -1
Query: 346 LCSVSLSVPPH*VRLCSPW*SVQHTSLHHQVTPGFSGHALGQLDKFP 486
L SVS + PP C P *S +HTSL HQ PG+ G AL Q KFP
Sbjct: 277 LYSVSPANPPDLCHPC*PC*SAEHTSLCHQAVPGY*GQALTQPGKFP 137
>gb|AV918402.1|AV918402 AV918402 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags20p01 3', mRNA sequence
Length = 682
Score = 184 bits (397), Expect = 2e-046
Identities = 76/104 (73%), Positives = 93/104 (89%)
Frame = -1 / -2
Query: 475 QAGLKHXPKNQELLDGVRRCVEQITKASRGELSEEELKERQNKAMQDPEIQNILTDPIMQ 296
QAGLK P NQELLDG+RRCV+QI KA+RG++S+E+L+E+Q+KAMQDPEIQNILTDPIM+
Sbjct: 609 QAGLKLDPNNQELLDGIRRCVQQINKANRGDISQEDLQEKQSKAMQDPEIQNILTDPIMR 430
Query: 295 QVLTDLQENPRAAQAHLKNPGVMQKIQKLVSAGIVQMK*TVAGM 164
QVL D QENPRAAQ HLK+PGV QKIQKL++AGIVQ +*+ G+
Sbjct: 429 QVLMDFQENPRAAQDHLKDPGVAQKIQKLINAGIVQTR*SSKGV 298
Score = 116 bits (249), Expect = 6e-026
Identities = 58/99 (58%), Positives = 64/99 (64%)
Frame = +2 / +1
Query: 188 LNYPCADELLDLLHHSGVLEVRLRSPRVLLQIRQNLLHDRISQDVLDLRVLHGFVLSLFQ 367
L+Y ELLDLL HS VL++ L SPRVLL+I Q+L HDRI +DVLD VLH F L L Q
Sbjct: 322 LDYSSVYELLDLLCHSRVLQMILSSPRVLLEIHQHLSHDRIGKDVLDFWVLHSFTLFLLQ 501
Query: 368 FLLTEFASARLGDLFNTPPYTIK*LLVFRXML*ASLISF 484
LLT L DL NTPPY IK LV R L* SL F
Sbjct: 502 ILLTYVTPVSLVDLLNTPPYAIKQFLVIRVKL*PSLGKF 618
Score = 84.9 bits (179), Expect(2) = 7e-024
Identities = 35/56 (62%), Positives = 40/56 (71%)
Frame = +3 / +2
Query: 168 PATVYFI*TIPALTSFWIFCITPGFLRCACAARGFSCRSVKTCCMIGSVRMFWISG 335
P + + TIPA SFWIFC TPG R + AA GFS +S+ TC MIGSVRMFWISG
Sbjct: 302 PLLDHLVWTIPAFMSFWIFCATPGSFR*S*AALGFSWKSINTCRMIGSVRMFWISG 469
Score = 44.6 bits (91), Expect(2) = 7e-024
Identities = 22/42 (52%), Positives = 25/42 (59%)
Frame = +1 / +3
Query: 346 LCSVSLSVPPH*VRLCSPW*SVQHTSLHHQVTPGFSGHALGQ 471
L SVS + PP C P *S +HTSL HQ PG+ G AL Q
Sbjct: 480 LYSVSPANPPDLCHPC*PC*SAEHTSLCHQAVPGY*GQALTQ 605
>gb|BJ456841.1|BJ456841 BJ456841 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak23m02 3', mRNA sequence
Length = 617
Score = 183 bits (395), Expect = 4e-046
Identities = 76/105 (72%), Positives = 93/105 (88%)
Frame = -1 / -2
Query: 478 YQAGLKHXPKNQELLDGVRRCVEQITKASRGELSEEELKERQNKAMQDPEIQNILTDPIM 299
YQAGLK NQELLDG+RRCV+QI KA+RG++S+E+L+E+Q+KAMQDPEIQNILTDPIM
Sbjct: 616 YQAGLKLDXNNQELLDGIRRCVQQINKANRGDISQEDLQEKQSKAMQDPEIQNILTDPIM 437
Query: 298 QQVLTDLQENPRAAQAHLKNPGVMQKIQKLVSAGIVQMK*TVAGM 164
+QVL D QENPRAAQ HLK+PGV QKIQKL++AGIVQ +*+ G+
Sbjct: 436 RQVLMDFQENPRAAQDHLKDPGVAQKIQKLINAGIVQTR*SSKGV 302
Score = 114 bits (244), Expect = 3e-025
Identities = 56/97 (57%), Positives = 63/97 (64%)
Frame = +2 / +2
Query: 188 LNYPCADELLDLLHHSGVLEVRLRSPRVLLQIRQNLLHDRISQDVLDLRVLHGFVLSLFQ 367
L+Y ELLDLL HS VL++ L SPRVLL+I Q+L HDRI +DVLD VLH F L L Q
Sbjct: 326 LDYSSVYELLDLLCHSRVLQMILSSPRVLLEIHQHLSHDRIGKDVLDFWVLHSFTLFLLQ 505
Query: 368 FLLTEFASARLGDLFNTPPYTIK*LLVFRXML*ASLI 478
LLT L DL NTPPY IK LV L* SL+
Sbjct: 506 ILLTYVTPVSLVDLLNTPPYAIKQFLVIXVKL*PSLV 616
Score = 84.9 bits (179), Expect(2) = 2e-024
Identities = 35/56 (62%), Positives = 40/56 (71%)
Frame = +3 / +3
Query: 168 PATVYFI*TIPALTSFWIFCITPGFLRCACAARGFSCRSVKTCCMIGSVRMFWISG 335
P + + TIPA SFWIFC TPG R + AA GFS +S+ TC MIGSVRMFWISG
Sbjct: 306 PLLDHLVWTIPAFMSFWIFCATPGSFR*S*AALGFSWKSINTCRMIGSVRMFWISG 473
Score = 46.4 bits (95), Expect(2) = 2e-024
Identities = 22/42 (52%), Positives = 25/42 (59%)
Frame = +1 / +1
Query: 346 LCSVSLSVPPH*VRLCSPW*SVQHTSLHHQVTPGFSGHALGQ 471
L SVS + PP C P *S +HTSL HQ PG+ G AL Q
Sbjct: 484 LYSVSPANPPDLCHPC*PC*SAEHTSLCHQAVPGYXGQALTQ 609
>gb|BJ459539.1|BJ459539 BJ459539 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak37e05 3', mRNA sequence
Length = 434
Score = 180 bits (388), Expect = 4e-045
Identities = 74/102 (72%), Positives = 91/102 (89%)
Frame = -1 / -2
Query: 469 GLKHXPKNQELLDGVRRCVEQITKASRGELSEEELKERQNKAMQDPEIQNILTDPIMQQV 290
GLK P NQELLDG+RRCV+QI KA+RG++S+E+L+E+Q+KAMQDPEIQNILTDPIM+QV
Sbjct: 433 GLKLDPNNQELLDGIRRCVQQINKANRGDISQEDLQEKQSKAMQDPEIQNILTDPIMRQV 254
Query: 289 LTDLQENPRAAQAHLKNPGVMQKIQKLVSAGIVQMK*TVAGM 164
L D QENPRAAQ HLK+PGV QKIQKL++AGIVQ +*+ G+
Sbjct: 253 LMDFQENPRAAQDHLKDPGVAQKIQKLINAGIVQTR*SSKGV 128
Score = 112 bits (240), Expect = 1e-024
Identities = 55/93 (59%), Positives = 61/93 (65%)
Frame = +2 / +2
Query: 188 LNYPCADELLDLLHHSGVLEVRLRSPRVLLQIRQNLLHDRISQDVLDLRVLHGFVLSLFQ 367
L+Y ELLDLL HS VL++ L SPRVLL+I Q+L HDRI +DVLD VLH F L L Q
Sbjct: 152 LDYSSVYELLDLLCHSRVLQMILSSPRVLLEIHQHLSHDRIGKDVLDFWVLHSFTLFLLQ 331
Query: 368 FLLTEFASARLGDLFNTPPYTIK*LLVFRXML* 466
LLT L DL NTPPY IK LV R L*
Sbjct: 332 ILLTYVTPVSLVDLLNTPPYAIKQFLVIRVKL* 430
Score = 84.9 bits (179), Expect(2) = 1e-023
Identities = 35/56 (62%), Positives = 40/56 (71%)
Frame = +3 / +3
Query: 168 PATVYFI*TIPALTSFWIFCITPGFLRCACAARGFSCRSVKTCCMIGSVRMFWISG 335
P + + TIPA SFWIFC TPG R + AA GFS +S+ TC MIGSVRMFWISG
Sbjct: 132 PLLDHLVWTIPAFMSFWIFCATPGSFR*S*AALGFSWKSINTCRMIGSVRMFWISG 299
Score = 43.2 bits (88), Expect(2) = 1e-023
Identities = 21/40 (52%), Positives = 24/40 (60%)
Frame = +1 / +1
Query: 346 LCSVSLSVPPH*VRLCSPW*SVQHTSLHHQVTPGFSGHAL 465
L SVS + PP C P *S +HTSL HQ PG+ G AL
Sbjct: 310 LYSVSPANPPDLCHPC*PC*SAEHTSLCHQAVPGY*GQAL 429
>gb|BQ659826.1|BQ659826 HF01N09w HF Hordeum vulgare subsp. vulgare cDNA clone HF01N09
3-PRIME, mRNA sequence
Length = 622
Score = 180 bits (388), Expect = 4e-045
Identities = 74/102 (72%), Positives = 91/102 (89%)
Frame = -1 / -1
Query: 469 GLKHXPKNQELLDGVRRCVEQITKASRGELSEEELKERQNKAMQDPEIQNILTDPIMQQV 290
GLK P NQELLDG+RRCV+QI KA+RG++S+E+L+E+Q+KAMQDPEIQNILTDPIM+QV
Sbjct: 622 GLKLDPNNQELLDGIRRCVQQINKANRGDISQEDLQEKQSKAMQDPEIQNILTDPIMRQV 443
Query: 289 LTDLQENPRAAQAHLKNPGVMQKIQKLVSAGIVQMK*TVAGM 164
L D QENPRAAQ HLK+PGV QKIQKL++AGIVQ +*+ G+
Sbjct: 442 LMDFQENPRAAQDHLKDPGVAQKIQKLINAGIVQTR*SSKGV 317
Score = 112 bits (240), Expect = 1e-024
Identities = 55/93 (59%), Positives = 61/93 (65%)
Frame = +2 / +2
Query: 188 LNYPCADELLDLLHHSGVLEVRLRSPRVLLQIRQNLLHDRISQDVLDLRVLHGFVLSLFQ 367
L+Y ELLDLL HS VL++ L SPRVLL+I Q+L HDRI +DVLD VLH F L L Q
Sbjct: 341 LDYSSVYELLDLLCHSRVLQMILSSPRVLLEIHQHLSHDRIGKDVLDFWVLHSFTLFLLQ 520
Query: 368 FLLTEFASARLGDLFNTPPYTIK*LLVFRXML* 466
LLT L DL NTPPY IK LV R L*
Sbjct: 521 ILLTYVTPVSLVDLLNTPPYAIKQFLVIRVKL* 619
Score = 84.9 bits (179), Expect(2) = 2e-023
Identities = 35/56 (62%), Positives = 40/56 (71%)
Frame = +3 / +3
Query: 168 PATVYFI*TIPALTSFWIFCITPGFLRCACAARGFSCRSVKTCCMIGSVRMFWISG 335
P + + TIPA SFWIFC TPG R + AA GFS +S+ TC MIGSVRMFWISG
Sbjct: 321 PLLDHLVWTIPAFMSFWIFCATPGSFR*S*AALGFSWKSINTCRMIGSVRMFWISG 488
Score = 43.2 bits (88), Expect(2) = 2e-023
Identities = 21/40 (52%), Positives = 24/40 (60%)
Frame = +1 / +1
Query: 346 LCSVSLSVPPH*VRLCSPW*SVQHTSLHHQVTPGFSGHAL 465
L SVS + PP C P *S +HTSL HQ PG+ G AL
Sbjct: 499 LYSVSPANPPDLCHPC*PC*SAEHTSLCHQAVPGY*GQAL 618
>gb|BI948007.1|BI948007 HVSMEl0007M23f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0007M23f, mRNA sequence
Length = 599
Score = 179 bits (386), Expect = 7e-045
Identities = 75/99 (75%), Positives = 84/99 (84%)
Frame = -1 / +3
Query: 466 LKHXPKNQELLDGVRRCVEQITKASRGELSEEELKERQNKAMQDPEIQNILTDPIMQQVL 287
L H P NQELLDGV+RC+ +I KA+RG+L+ EELKERQ KAM DPEI NILTDP+M+QVL
Sbjct: 9 LNHDPSNQELLDGVKRCIREINKANRGDLTPEELKERQGKAMHDPEIHNILTDPVMRQVL 188
Query: 286 TDLQENPRAAQAHLKNPGVMQKIQKLVSAGIVQMK*TVA 170
D ENP+AAQ HLKNPGV QKIQKLVSAGIVQMK*T A
Sbjct: 189 IDFXENPKAAQEHLKNPGVKQKIQKLVSAGIVQMK*TKA 305
Score = 129 bits (276), Expect = 1e-029
Identities = 59/95 (62%), Positives = 70/95 (73%)
Frame = +2 / -1
Query: 179 LLHLNYPCADELLDLLHHSGVLEVRLRSPRVLLQIRQNLLHDRISQDVLDLRVLHGFVLS 358
LLHL+YPCA ELLDLL H+GVLE+ LRS +L +I Q+L H R+ QDV+D RV+H F LS
Sbjct: 296 LLHLDYPCAHELLDLLLHAGVLEMLLRSLGILXEINQHLPHHRVRQDVMDFRVMHSFALS 117
Query: 359 LFQFLLTEFASARLGDLFNTPPYTIK*LLVFRXML 463
L QFL E AS RL DL NT YTI+ LLV R M+
Sbjct: 116 LLQFLRGEIASVRLVDLPNTSLYTIEQLLVTRIMI 12
Score = 108 bits (230), Expect(2) = 5e-035
Identities = 42/55 (76%), Positives = 46/55 (83%)
Frame = +3 / -2
Query: 171 ATVYFI*TIPALTSFWIFCITPGFLRCACAARGFSCRSVKTCCMIGSVRMFWISG 335
A VYFI TIPALTSFWIFC TPGFLRC+CAA GFS +S+ TC + GSVRM WISG
Sbjct: 304 ALVYFIWTIPALTSFWIFCFTPGFLRCSCAALGFSWKSINTCRITGSVRMLWISG 140
Score = 65.2 bits (136), Expect(2) = 1e-022
Identities = 28/43 (65%), Positives = 31/43 (72%)
Frame = -3 / +2
Query: 299 AAGFDGSAGEPSGCAGAPQEPRSDAEDPEARQRRDSSDEVDGG 171
AAG D E GCA A QEPR +A+DPEAR+RRDS DEVD G
Sbjct: 176 AAGVD*FPXESQGCARASQEPRREAKDPEARERRDSPDEVDQG 304
Score = 60.2 bits (125), Expect(2) = 1e-022
Identities = 33/54 (61%), Positives = 36/54 (66%)
Frame = -2 / +1
Query: 474 KLA*SMXRKTRSYLMV*GGVLNRSPRRAEANSVRRN*KRDRTKPCKTLRSRTS* 313
+ A* M R TRS MV* V RS RR EA S RRN*+RDR K C TL+S TS*
Sbjct: 1 RTA*IMIRVTRSCSMV*RDVFGRSTRRTEAISPRRN*RRDRAKLCMTLKSITS* 162
Score = 58.8 bits (122), Expect(2) = 5e-035
Identities = 25/41 (60%), Positives = 29/41 (70%)
Frame = +1 / -3
Query: 346 LCSVSLSVPPH*VRLCSPW*SVQHTSLHHQVTPGFSGHALG 468
LC VS SVPP * RLCSP *S ++ SLHH+ PG+S H G
Sbjct: 129 LCPVSPSVPPG*DRLCSPC*SPEYISLHHRAAPGYSDHDSG 7
>gb|BQ764688.1|BQ764688 EBca01_SQ004_I16_R carpel, pre-anthesis, no treatment, cv Optic,
EBca01 Hordeum vulgare subsp. vulgare cDNA clone
EBca01_SQ004_I16 5', mRNA sequence
Length = 498
Score = 155 bits (334), Expect = 1e-037
Identities = 63/89 (70%), Positives = 80/89 (89%)
Frame = -1 / -2
Query: 430 GVRRCVEQITKASRGELSEEELKERQNKAMQDPEIQNILTDPIMQQVLTDLQENPRAAQA 251
G+RRCV+QI KA+RG++S+E+L+E+Q+KAMQDP IQNILTDPIM+QVL D QENPRAAQ
Sbjct: 497 GIRRCVQQINKANRGDISQEDLQEKQSKAMQDPXIQNILTDPIMRQVLMDFQENPRAAQD 318
Query: 250 HLKNPGVMQKIQKLVSAGIVQMK*TVAGM 164
HLK+PGV QKIQKL++AGIVQ +*+ G+
Sbjct: 317 HLKDPGVAQKIQKLINAGIVQTR*SSKGV 231
Score = 101 bits (216), Expect = 2e-021
Identities = 48/80 (60%), Positives = 53/80 (66%)
Frame = +2 / +3
Query: 188 LNYPCADELLDLLHHSGVLEVRLRSPRVLLQIRQNLLHDRISQDVLDLRVLHGFVLSLFQ 367
L+Y ELLDLL HS VL++ L SPRVLL+I Q+L HDRI DVLD VLH F L L Q
Sbjct: 255 LDYSSVYELLDLLCHSRVLQMILSSPRVLLEIHQHLSHDRIGXDVLDXWVLHSFTLFLLQ 434
Query: 368 FLLTEFASARLGDLFNTPPY 427
LLT L DL NTPPY
Sbjct: 435 ILLTYVTPVSLVDLLNTPPY 494
>gb|BJ468713.1|BJ468713 BJ468713 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags39p01 3', mRNA sequence
Length = 640
Score = 152 bits (326), Expect = 1e-036
Identities = 62/86 (72%), Positives = 78/86 (90%)
Frame = -1 / -1
Query: 421 RCVEQITKASRGELSEEELKERQNKAMQDPEIQNILTDPIMQQVLTDLQENPRAAQAHLK 242
RCV+QI KA+RG++S+E+L+E+Q+KAMQDPEIQNILTDPIM+QVL D QENPRAAQ HLK
Sbjct: 640 RCVQQINKANRGDISQEDLQEKQSKAMQDPEIQNILTDPIMRQVLMDFQENPRAAQDHLK 461
Query: 241 NPGVMQKIQKLVSAGIVQMK*TVAGM 164
+PGV QKIQKL++AGIVQ +*+ G+
Sbjct: 460 DPGVAQKIQKLINAGIVQTR*SSKGV 383
>gb|BJ476688.1|BJ476688 BJ476688 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal36h13 3', mRNA sequence
Length = 558
Score = 148 bits (317), Expect = 2e-035
Identities = 61/86 (70%), Positives = 77/86 (89%)
Frame = -1 / -1
Query: 421 RCVEQITKASRGELSEEELKERQNKAMQDPEIQNILTDPIMQQVLTDLQENPRAAQAHLK 242
RCV+QI KA+RG++S+E+L+E+Q+KAMQDPEIQNILTD IM+QVL D QENPRAAQ HLK
Sbjct: 558 RCVQQINKANRGDISQEDLQEKQSKAMQDPEIQNILTDXIMRQVLMDFQENPRAAQDHLK 379
Query: 241 NPGVMQKIQKLVSAGIVQMK*TVAGM 164
+PGV QKIQKL++AGIVQ +*+ G+
Sbjct: 378 DPGVAQKIQKLINAGIVQTR*SSKGV 301
>gb|BQ762687.1|BQ762687 EBro02_SQ004_B20_R root, 3 week, hydroponic grown, low nitrogen, cv
Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone
EBro02_SQ004_B20 5', mRNA sequence
Length = 380
Score = 143 bits (307), Expect = 6e-034
Identities = 62/73 (84%), Positives = 66/73 (90%)
Frame = -1 / +1
Query: 388 GELSEEELKERQNKAMQDPEIQNILTDPIMQQVLTDLQENPRAAQAHLKNPGVMQKIQKL 209
GEL+ EELKERQ KAMQDPEIQNILTDP+M+QVL D QENP+AAQ HLKNPGV QKIQKL
Sbjct: 1 GELTPEELKERQGKAMQDPEIQNILTDPVMRQVLIDFQENPKAAQEHLKNPGVKQKIQKL 180
Query: 208 VSAGIVQMK*TVA 170
VSAGIVQMK*T A
Sbjct: 181 VSAGIVQMK*TKA 219
Score = 111 bits (236), Expect(2) = 8e-024
Identities = 43/55 (78%), Positives = 47/55 (85%)
Frame = +3 / -1
Query: 171 ATVYFI*TIPALTSFWIFCITPGFLRCACAARGFSCRSVKTCCMIGSVRMFWISG 335
A VYFI TIPALTSFWIFC TPGFLRC+CAA GFS +S+ TC + GSVRMFWISG
Sbjct: 218 ALVYFIWTIPALTSFWIFCFTPGFLRCSCAALGFSWKSINTCRITGSVRMFWISG 54
Score = 107 bits (228), Expect = 5e-023
Identities = 47/70 (67%), Positives = 54/70 (77%)
Frame = +2 / -3
Query: 179 LLHLNYPCADELLDLLHHSGVLEVRLRSPRVLLQIRQNLLHDRISQDVLDLRVLHGFVLS 358
LLHL+YPCA ELLDLL H+GVLE+ LRS +LL+I Q+L H R+ QDVLD RVLH F LS
Sbjct: 210 LLHLDYPCAHELLDLLLHAGVLEMLLRSLGILLEINQHLPHHRVRQDVLDFRVLHSFALS 31
Query: 359 LFQFLLTEFA 388
L QFL E A
Sbjct: 30 LLQFLRGELA 1
Score = 17.6 bits (32), Expect(2) = 8e-024
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +1 / -2
Query: 346 LCSVSLSVP 372
LC VS SVP
Sbjct: 43 LCPVSPSVP 17
>gb|BQ762688.1|BQ762688 EBro02_SQ004_B21_R root, 3 week, hydroponic grown, low nitrogen, cv
Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone
EBro02_SQ004_B21 5', mRNA sequence
Length = 396
Score = 143 bits (307), Expect = 6e-034
Identities = 62/73 (84%), Positives = 66/73 (90%)
Frame = -1 / +2
Query: 388 GELSEEELKERQNKAMQDPEIQNILTDPIMQQVLTDLQENPRAAQAHLKNPGVMQKIQKL 209
GEL+ EELKERQ KAMQDPEIQNILTDP+M+QVL D QENP+AAQ HLKNPGV QKIQKL
Sbjct: 17 GELTPEELKERQGKAMQDPEIQNILTDPVMRQVLIDFQENPKAAQEHLKNPGVKQKIQKL 196
Query: 208 VSAGIVQMK*TVA 170
VSAGIVQMK*T A
Sbjct: 197 VSAGIVQMK*TKA 235
Score = 111 bits (236), Expect(2) = 8e-024
Identities = 43/55 (78%), Positives = 47/55 (85%)
Frame = +3 / -1
Query: 171 ATVYFI*TIPALTSFWIFCITPGFLRCACAARGFSCRSVKTCCMIGSVRMFWISG 335
A VYFI TIPALTSFWIFC TPGFLRC+CAA GFS +S+ TC + GSVRMFWISG
Sbjct: 234 ALVYFIWTIPALTSFWIFCFTPGFLRCSCAALGFSWKSINTCRITGSVRMFWISG 70
Score = 109 bits (232), Expect = 1e-023
Identities = 48/73 (65%), Positives = 55/73 (75%)
Frame = +2 / -3
Query: 179 LLHLNYPCADELLDLLHHSGVLEVRLRSPRVLLQIRQNLLHDRISQDVLDLRVLHGFVLS 358
LLHL+YPCA ELLDLL H+GVLE+ LRS +LL+I Q+L H R+ QDVLD RVLH F LS
Sbjct: 226 LLHLDYPCAHELLDLLLHAGVLEMLLRSLGILLEINQHLPHHRVRQDVLDFRVLHSFALS 47
Query: 359 LFQFLLTEFASAR 397
L QFL E A R
Sbjct: 46 LLQFLRGELARTR 8
Score = 17.6 bits (32), Expect(2) = 8e-024
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +1 / -2
Query: 346 LCSVSLSVP 372
LC VS SVP
Sbjct: 59 LCPVSPSVP 33
>gb|BU976043.1|BU976043 HA03A17u HA Hordeum vulgare subsp. vulgare cDNA clone HA03A17
3-PRIME, mRNA sequence
Length = 540
Score = 143 bits (306), Expect = 8e-034
Identities = 59/82 (71%), Positives = 74/82 (90%)
Frame = -1 / -3
Query: 409 QITKASRGELSEEELKERQNKAMQDPEIQNILTDPIMQQVLTDLQENPRAAQAHLKNPGV 230
QI KA+RG++S+E+L+E+Q+KAMQDPEIQNILTDPIM+QVL D QENPRAAQ HLK+PGV
Sbjct: 538 QINKANRGDISQEDLQEKQSKAMQDPEIQNILTDPIMRQVLMDFQENPRAAQDHLKDPGV 359
Query: 229 MQKIQKLVSAGIVQMK*TVAGM 164
QKIQKL++AGIVQ +*+ G+
Sbjct: 358 AQKIQKLINAGIVQTR*SSKGV 293
>gb|BQ660349.1|BQ660349 HI02A16u HI Hordeum vulgare subsp. vulgare cDNA clone HI02A16
3-PRIME, mRNA sequence
Length = 558
Score = 140 bits (301), Expect = 4e-033
Identities = 58/81 (71%), Positives = 73/81 (90%)
Frame = -1 / -2
Query: 406 ITKASRGELSEEELKERQNKAMQDPEIQNILTDPIMQQVLTDLQENPRAAQAHLKNPGVM 227
I KA+RG++S+E+L+E+Q+KAMQDPEIQNILTDPIM+QVL D QENPRAAQ HLK+PGV
Sbjct: 557 INKANRGDISQEDLQEKQSKAMQDPEIQNILTDPIMRQVLMDFQENPRAAQDHLKDPGVA 378
Query: 226 QKIQKLVSAGIVQMK*TVAGM 164
QKIQKL++AGIVQ +*+ G+
Sbjct: 377 QKIQKLINAGIVQTR*SSKGV 315
>gb|BQ468025.1|BQ468025 HR01L03r HR Hordeum vulgare subsp. vulgare cDNA clone HR01L03
5-PRIME, mRNA sequence
Length = 547
Score = 138 bits (297), Expect = 1e-032
Identities = 57/79 (72%), Positives = 72/79 (91%)
Frame = -1 / +3
Query: 400 KASRGELSEEELKERQNKAMQDPEIQNILTDPIMQQVLTDLQENPRAAQAHLKNPGVMQK 221
KA+RG++S+E+L+E+Q+KAMQDPEIQNILTDPIM+QVL D QENPRAAQ HLK+PGV QK
Sbjct: 12 KANRGDISQEDLQEKQSKAMQDPEIQNILTDPIMRQVLMDFQENPRAAQDHLKDPGVAQK 191
Query: 220 IQKLVSAGIVQMK*TVAGM 164
IQKL++AGIVQ +*+ G+
Sbjct: 192 IQKLINAGIVQTR*SSKGV 248
>gb|CA006166.1|CA006166 HU05B18u HU Hordeum vulgare subsp. vulgare cDNA clone HU05B18
3-PRIME, mRNA sequence
Length = 556
Score = 136 bits (292), Expect = 7e-032
Identities = 56/78 (71%), Positives = 71/78 (91%)
Frame = -1 / -2
Query: 397 ASRGELSEEELKERQNKAMQDPEIQNILTDPIMQQVLTDLQENPRAAQAHLKNPGVMQKI 218
A+RG++S+E+L+E+Q+KAMQDPEIQNILTDPIM+QVL D QENPRAAQ HLK+PGV QKI
Sbjct: 555 ANRGDISQEDLQEKQSKAMQDPEIQNILTDPIMRQVLMDFQENPRAAQDHLKDPGVAQKI 376
Query: 217 QKLVSAGIVQMK*TVAGM 164
QKL++AGIVQ +*+ G+
Sbjct: 375 QKLINAGIVQTR*SSKGV 322
>gb|BU968615.1|BU968615 HB08B02r BC Hordeum vulgare subsp. vulgare cDNA clone HB08B02
5-PRIME, mRNA sequence
Length = 579
Score = 136 bits (291), Expect = 9e-032
Identities = 54/69 (78%), Positives = 62/69 (89%)
Frame = -1 / +3
Query: 487 LETYQAGLKHXPKNQELLDGVRRCVEQITKASRGELSEEELKERQNKAMQDPEIQNILTD 308
+ETYQ GLKH P NQELLDGV+RC++QI KA+RGEL+ EELKERQ KAMQDPEIQNILTD
Sbjct: 369 METYQEGLKHDPSNQELLDGVKRCIQQINKANRGELTPEELKERQGKAMQDPEIQNILTD 548
Query: 307 PIMQQVLTD 281
P+M+QVL D
Sbjct: 549 PVMRQVLID 575
>gb|AV916463.1|AV916463 AV916463 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags17f05 5', mRNA sequence
Length = 508
Score = 131 bits (281), Expect = 2e-030
Identities = 52/69 (75%), Positives = 64/69 (92%)
Frame = -1 / +3
Query: 487 LETYQAGLKHXPKNQELLDGVRRCVEQITKASRGELSEEELKERQNKAMQDPEIQNILTD 308
+ETYQAGLK P NQELLDG+RRCV+QI KA+RG++S+E+L+E+Q+KAMQDPEIQNILTD
Sbjct: 297 METYQAGLKLDPNNQELLDGIRRCVQQINKANRGDISQEDLQEKQSKAMQDPEIQNILTD 476
Query: 307 PIMQQVLTD 281
PIM+QVL D
Sbjct: 477 PIMRQVLMD 503
>gb|BQ468560.1|BQ468560 HM01J16T HM Hordeum vulgare subsp. vulgare cDNA clone HM01J16
5-PRIME, mRNA sequence
Length = 603
Score = 128 bits (274), Expect = 2e-029
Identities = 56/75 (74%), Positives = 63/75 (84%)
Frame = -1 / +2
Query: 394 SRGELSEEELKERQNKAMQDPEIQNILTDPIMQQVLTDLQENPRAAQAHLKNPGVMQKIQ 215
+R L + +ER+ KAMQDPEIQNILTDP+M+QVL D QENP+AAQ HLKNPGV QKIQ
Sbjct: 320 NR*SLFDSIAREREGKAMQDPEIQNILTDPVMRQVLIDFQENPKAAQEHLKNPGVKQKIQ 499
Query: 214 KLVSAGIVQMK*TVA 170
KLVSAGIVQMK*T A
Sbjct: 500 KLVSAGIVQMK*TKA 544
Score = 111 bits (236), Expect = 4e-024
Identities = 43/55 (78%), Positives = 47/55 (85%)
Frame = +3 / -1
Query: 171 ATVYFI*TIPALTSFWIFCITPGFLRCACAARGFSCRSVKTCCMIGSVRMFWISG 335
A VYFI TIPALTSFWIFC TPGFLRC+CAA GFS +S+ TC + GSVRMFWISG
Sbjct: 543 ALVYFIWTIPALTSFWIFCFTPGFLRCSCAALGFSWKSINTCRITGSVRMFWISG 379
>gb|CA010273.1|CA010273 HT10P01u HT Hordeum vulgare subsp. vulgare cDNA clone HT10P01
3-PRIME, mRNA sequence
Length = 516
Score = 127 bits (272), Expect = 4e-029
Identities = 53/72 (73%), Positives = 65/72 (90%)
Frame = -1 / -2
Query: 379 SEEELKERQNKAMQDPEIQNILTDPIMQQVLTDLQENPRAAQAHLKNPGVMQKIQKLVSA 200
S+E+L+E+Q+KAMQDPEIQNILTDPIM+QVL D QENPRAAQ HLK+PGV QKIQKL++A
Sbjct: 515 SQEDLQEKQSKAMQDPEIQNILTDPIMRQVLMDFQENPRAAQDHLKDPGVAQKIQKLINA 336
Query: 199 GIVQMK*TVAGM 164
GIVQ +*+ G+
Sbjct: 335 GIVQTR*SSKGV 300
>gb|CA010063.1|CA010063 HT11L04u HT Hordeum vulgare subsp. vulgare cDNA clone HT11L04
3-PRIME, mRNA sequence
Length = 528
Score = 87.7 bits (185), Expect(2) = 3e-026
Identities = 37/51 (72%), Positives = 44/51 (86%)
Frame = -1 / -2
Query: 316 LTDPIMQQVLTDLQENPRAAQAHLKNPGVMQKIQKLVSAGIVQMK*TVAGM 164
LTDPIM+QVL D QENPRAAQ HLK+PGV QKIQKL++AGIVQ +*+ G+
Sbjct: 452 LTDPIMRQVLMDFQENPRAAQDHLKDPGVAQKIQKLINAGIVQTR*SSKGV 300
Score = 49.6 bits (102), Expect(2) = 3e-026
Identities = 18/25 (72%), Positives = 25/25 (100%)
Frame = -1 / -1
Query: 391 RGELSEEELKERQNKAMQDPEIQNI 317
RG++S+E+L+E+Q+KAMQDPEIQNI
Sbjct: 528 RGDISQEDLQEKQSKAMQDPEIQNI 454
>gb|BU967383.1|BU967383 HB04C07r BC Hordeum vulgare subsp. vulgare cDNA clone HB04C07
5-PRIME, mRNA sequence
Length = 634
Score = 102 bits (218), Expect = 1e-021
Identities = 40/52 (76%), Positives = 46/52 (88%)
Frame = -1 / +1
Query: 487 LETYQAGLKHXPKNQELLDGVRRCVEQITKASRGELSEEELKERQNKAMQDP 332
+ETYQ GLKH P NQELLDGV+RC++QI KA+RGEL+ EELKERQ KAMQDP
Sbjct: 478 METYQEGLKHDPSNQELLDGVKRCIQQINKANRGELTPEELKERQGKAMQDP 633
>gb|BI777816.2|BI777816 EBro08_SQ002_D01_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ002_D01 5', mRNA sequence
Length = 340
Score = 101 bits (216), Expect = 2e-021
Identities = 43/57 (75%), Positives = 50/57 (87%)
Frame = -1 / +2
Query: 334 PEIQNILTDPIMQQVLTDLQENPRAAQAHLKNPGVMQKIQKLVSAGIVQMK*TVAGM 164
PEIQNILTDPIM+QVL D QENPRAAQ HLK+PGV QKIQKL++AGIVQ +*+ G+
Sbjct: 11 PEIQNILTDPIMRQVLMDFQENPRAAQDHLKDPGVAQKIQKLINAGIVQTR*SSKGV 181
>gb|CB859612.1|CB859612 HI11A04w HI Hordeum vulgare subsp. vulgare cDNA clone HI11A04
3-PRIME, mRNA sequence
Length = 524
Score = 101 bits (216), Expect = 2e-021
Identities = 43/57 (75%), Positives = 50/57 (87%)
Frame = -1 / -3
Query: 334 PEIQNILTDPIMQQVLTDLQENPRAAQAHLKNPGVMQKIQKLVSAGIVQMK*TVAGM 164
PEIQNILTDPIM+QVL D QENPRAAQ HLK+PGV QKIQKL++AGIVQ +*+ G+
Sbjct: 522 PEIQNILTDPIMRQVLMDFQENPRAAQDHLKDPGVAQKIQKLINAGIVQTR*SSKGV 352
>gb|BE231164.2|BE231164 HVSMEg0017E08f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0017E08f, mRNA sequence
Length = 908
Score = 100 bits (214), Expect = 4e-021
Identities = 38/58 (65%), Positives = 52/58 (89%)
Frame = -1 / +2
Query: 487 LETYQAGLKHXPKNQELLDGVRRCVEQITKASRGELSEEELKERQNKAMQDPEIQNIL 314
+ETYQAGLK P NQELLDG+RRCV+QI KA++G++S+E+L+E+Q+KA+QDPEI+ L
Sbjct: 440 METYQAGLKLDPNNQELLDGIRRCVQQINKANKGDISQEDLQEKQSKALQDPEIRTCL 613
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 207,459,396
Number of Sequences: 312970
Number of extensions: 2819205
Number of successful extensions: 74524
Number of sequences better than 1.0e-020: 57
length of database: 58,378,179
effective HSP length: 50
effective length of database: 42,729,679
effective search space used: 4742994369
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)