TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3570920.2.1
(786 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BM816983.1|BM816983 HC113B09_SK.ab1 HC Hordeum vulgare s... 93 4e-052
gb|AV913742.1|AV913742 AV913742 K. Sato unpublished cDNA li... 157 1e-048
gb|AL504555.1|AL504555 AL504555 Hordeum vulgare Barke roots... 154 3e-046
gb|BU994995.1|BU994995 HM08O01r HM Hordeum vulgare subsp. v... 102 3e-043
gb|BQ463203.1|BQ463203 HI04G07r HI Hordeum vulgare subsp. v... 174 4e-043
gb|BI960657.1|BI960657 HVSMEn0025K09f Hordeum vulgare rachi... 144 4e-042
gb|BE060779.2|BE060779 HVSMEg0013F11f Hordeum vulgare pre-a... 141 3e-040
gb|U96096.1|HVU96096 Hordeum vulgare endo-1,3-beta-glucanas... 75 2e-039
gb|M96939.1|BLYGLCNHV Hordeum vulgare glucan endo-1,3-beta-... 64 3e-037
gb|BF263602.2|BF263602 HV_CEa0007C20f Hordeum vulgare seedl... 126 5e-037
gb|BU981210.1|BU981210 HA22P03r HA Hordeum vulgare subsp. v... 95 1e-036
gb|AF479647.2| Hordeum vulgare subsp. vulgare beta-1,3-gluc... 59 4e-035
emb|AJ271367.1|HVU271367 Hordeum vulgare mRNA for beta-1,3-... 59 4e-035
gb|AF515785.1| Hordeum vulgare subsp. vulgare beta-1,3-gluc... 59 4e-035
gb|AL506052.1|AL506052 AL506052 Hordeum vulgare Barke devel... 113 4e-035
gb|BJ456617.1|BJ456617 BJ456617 K. Sato unpublished cDNA li... 54 1e-034
gb|BQ469894.1|BQ469894 HX01C20T HX Hordeum vulgare subsp. v... 146 2e-034
gb|BM370290.2|BM370290 EBro08_SQ003_L21_R root, 3 week, dro... 144 5e-034
gb|BQ472728.1|BQ472728 HB01K17r BC Hordeum vulgare subsp. v... 143 1e-033
gb|BJ461506.1|BJ461506 BJ461506 K. Sato unpublished cDNA li... 58 2e-032
gb|BJ458099.1|BJ458099 BJ458099 K. Sato unpublished cDNA li... 58 2e-032
gb|BJ460297.1|BJ460297 BJ460297 K. Sato unpublished cDNA li... 58 2e-032
gb|BJ452749.1|BJ452749 BJ452749 K. Sato unpublished cDNA li... 58 2e-032
gb|AV909148.1|AV909148 AV909148 K. Sato unpublished cDNA li... 58 3e-032
gb|M96938.1|BLYGLCNHI Hordeum vulgare glucan endo-1,3-beta-... 90 3e-032
gb|CA012344.1|CA012344 HT05C17r HT Hordeum vulgare subsp. v... 90 8e-032
gb|BJ452679.1|BJ452679 BJ452679 K. Sato unpublished cDNA li... 56 9e-032
gb|BJ456958.1|BJ456958 BJ456958 K. Sato unpublished cDNA li... 58 9e-032
gb|BQ664706.1|BQ664706 HV04H18u HV Hordeum vulgare subsp. v... 136 1e-031
gb|CB879505.1|CB879505 HP02I04w HP Hordeum vulgare subsp. v... 97 2e-031
gb|BU981251.1|BU981251 HA23B03r HA Hordeum vulgare subsp. v... 95 3e-031
gb|AV931182.1|AV931182 AV931182 K. Sato unpublished cDNA li... 55 6e-031
gb|AV911030.1|AV911030 AV911030 K. Sato unpublished cDNA li... 58 6e-031
gb|BF265292.2|BF265292 HV_CEa0011J05f Hordeum vulgare seedl... 134 7e-031
gb|BM816843.1|BM816843 HC03E07_T3.ab1 HC Hordeum vulgare su... 119 1e-030
gb|BG415032.1|BG415032 HVSMEk0004M09f Hordeum vulgare testa... 111 7e-030
gb|BJ449523.1|BJ449523 BJ449523 K. Sato unpublished cDNA li... 58 2e-029
gb|BU980481.1|BU980481 HA20M14r HA Hordeum vulgare subsp. v... 95 2e-029
gb|BJ453971.1|BJ453971 BJ453971 K. Sato unpublished cDNA li... 58 4e-029
gb|CA017450.1|CA017450 HV05D22r HV Hordeum vulgare subsp. v... 61 2e-028
emb|X52572.1|HVBDG Barley DNA for (1-3,1-4)-beta-D-glucanas... 67 2e-028
emb|X56775.1|HVGLB1 H.vulgare Glb 1 gene for 1-3,1-4-beta-D... 67 2e-028
emb|X56260.1|HVGLUEND Barley DNA for (1,3;1,4)-beta-glucana... 67 2e-028
gb|CA018533.1|CA018533 HV08O12r HV Hordeum vulgare subsp. v... 67 2e-028
gb|BE601595.2|BE601595 HVSMEh0098M24f Hordeum vulgare 5-45 ... 59 2e-028
gb|AY239039.1| Hordeum vulgare subsp. vulgare clone SMEm002... 66 9e-028
gb|AY239038.1| Hordeum vulgare subsp. vulgare clone CEa0006... 66 1e-027
gb|AL510583.1|AL510583 AL510583 Hordeum vulgare Barke devel... 68 2e-027
gb|BG416675.1|BG416675 HVSMEk0014B06f Hordeum vulgare testa... 119 4e-027
gb|BQ766726.1|BQ766726 EBro08_SQ006_O23_R root, 3 week, dro... 64 9e-027
gb|CB879078.1|CB879078 HP10O03T HP Hordeum vulgare subsp. v... 59 2e-026
gb|BF258041.2|BF258041 HVSMEf0014J07f Hordeum vulgare seedl... 97 1e-025
gb|AV926710.1|AV926710 AV926710 K. Sato unpublished cDNA li... 67 1e-025
gb|BJ454422.1|BJ454422 BJ454422 K. Sato unpublished cDNA li... 66 1e-025
gb|CB879474.1|CB879474 HP02G13w HP Hordeum vulgare subsp. v... 77 3e-025
gb|BQ465778.1|BQ465778 HU04K16r HU Hordeum vulgare subsp. v... 115 4e-025
gb|BQ663931.1|BQ663931 HU04K16u HU Hordeum vulgare subsp. v... 115 4e-025
gb|BJ450923.1|BJ450923 BJ450923 K. Sato unpublished cDNA li... 66 5e-025
gb|BQ465340.1|BQ465340 HU03F15r HU Hordeum vulgare subsp. v... 64 9e-025
gb|BJ545156.1|BJ545156 BJ545156 K. Sato unpublished cDNA li... 67 9e-025
gb|CB877331.1|CB877331 HP04H07T HP Hordeum vulgare subsp. v... 74 2e-024
gb|BF263831.2|BF263831 HV_CEa0007M17f Hordeum vulgare seedl... 48 2e-024
gb|AV925542.1|AV925542 AV925542 K. Sato unpublished cDNA li... 63 2e-024
gb|CA019664.1|CA019664 HV12L09r HV Hordeum vulgare subsp. v... 111 4e-024
gb|CB876783.1|CB876783 HP02G13T HP Hordeum vulgare subsp. v... 73 4e-024
gb|BJ450676.1|BJ450676 BJ450676 K. Sato unpublished cDNA li... 58 8e-024
gb|BQ760714.1|BQ760714 EBro03_SQ003_E08_R root, 3 week, wat... 109 2e-023
gb|BG415029.1|BG415029 HVSMEk0004M05f Hordeum vulgare testa... 89 4e-023
gb|BQ761015.1|BQ761015 EBro04_SQ001_N07_R root, 3 week, sal... 108 5e-023
gb|CB877505.1|CB877505 HP05C24T HP Hordeum vulgare subsp. v... 48 1e-022
gb|BQ768478.1|BQ768478 EBro08_SQ011_G22_R root, 3 week, dro... 64 2e-022
gb|CA002030.1|CA002030 HS06E23r HS Hordeum vulgare subsp. v... 93 2e-022
gb|BM370310.2|BM370310 EBro08_SQ003_M21_R root, 3 week, dro... 75 1e-021
gb|BF253425.2|BF253425 HVSMEf0001G05f Hordeum vulgare seedl... 60 1e-021
gb|BF265541.2|BF265541 HV_CEa0012I19f Hordeum vulgare seedl... 67 3e-021
gb|BJ449157.1|BJ449157 BJ449157 K. Sato unpublished cDNA li... 48 4e-021
gb|CA000314.1|CA000314 HS09A21u HS Hordeum vulgare subsp. v... 76 4e-021
gb|BE216780.1|BE216780 HV_CEb0011J02f Hordeum vulgare seedl... 51 5e-021
>gb|BM816983.1|BM816983 HC113B09_SK.ab1 HC Hordeum vulgare subsp. vulgare cDNA clone
HC113B09_SK.ab1 similar to
Glucosylceramidase,licheninase,Glucan endo-1, mRNA
sequence
Length = 919
Score = 93.2 bits (198), Expect(3) = 4e-052
Identities = 33/74 (44%), Positives = 53/74 (71%)
Frame = +1 / +2
Query: 124 KITISSTHSLGILSRSFPPSAGAFNSSYAYFLKPMLQFLVENQAPFMVDLYPYYAYQNSR 303
++T+SS HS+ +L+ SFPPS+GAF A ++KP+L F + +PF+++ YP++AY+ S
Sbjct: 38 QVTVSSAHSVNVLATSFPPSSGAFQEGVAQYVKPLLDFHSKTGSPFLINAYPFFAYKGSP 217
Query: 304 SNVSLNYALFSPES 345
+VSL Y LF P +
Sbjct: 218 GSVSLPYVLFQPNA 259
Score = 86.3 bits (183), Expect(3) = 4e-052
Identities = 32/73 (43%), Positives = 47/73 (64%)
Frame = +1 / +2
Query: 370 GLVYTNMFDAQVDSIFFALMALNFKTLKIMITESGWPNKGAVKETGATPDNAQTYNTNLI 549
GLVY NM AQ+D+++ A+ A+ + + ++E+GWP+KG E GAT NA YN NL+
Sbjct: 275 GLVYDNMLYAQIDAVYAAMKAMGHADIGVRVSETGWPSKGDEDEVGATAQNAAAYNGNLM 454
Query: 550 RHVVNDSGTPAKP 588
+ + GTP KP
Sbjct: 455 QRIAMSQGTPLKP 493
Score = 64.0 bits (134), Expect(3) = 4e-052
Identities = 23/43 (53%), Positives = 34/43 (79%)
Frame = +1 / +3
Query: 580 AKPGEEIDVYIFSLFNENRKPGIESERNWGLFFPDKSSIYSLD 708
+ P IDV++F+LFNEN KPG SERN+GLF+P+ S +Y+++
Sbjct: 486 SSPACXIDVFVFALFNENMKPGPASERNYGLFYPNGSPVYAIN 614
>gb|AV913742.1|AV913742 AV913742 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags23c03 5', mRNA sequence
Length = 613
Score = 157 bits (338), Expect(2) = 1e-048
Identities = 59/121 (48%), Positives = 83/121 (68%)
Frame = +1 / +1
Query: 343 SQDVIDPNTGLVYTNMFDAQVDSIFFALMALNFKTLKIMITESGWPNKGAVKETGATPDN 522
+ + DPNT L YTNMFDA VD+ + ++ A+NF + +M+T SGWP A E A DN
Sbjct: 199 NSQIADPNTNLFYTNMFDAMVDATYNSMKAMNFTNIPVMVTASGWPWHSARNEPAADVDN 378
Query: 523 AQTYNTNLIRHVVNDSGTPAKPGEEIDVYIFSLFNENRKPGIESERNWGLFFPDKSSIYS 702
A YNTNLIRHV+N+SGTP++P ++ Y+F LFNE+ + G S +WG+ F + S++YS
Sbjct: 379 ALAYNTNLIRHVLNNSGTPSQPNNQVSTYLFELFNEDLRSGSVSGESWGIMFSNASAVYS 558
Query: 703 L 705
L
Sbjct: 559 L 561
Score = 56.3 bits (117), Expect(2) = 1e-048
Identities = 22/61 (36%), Positives = 35/61 (57%)
Frame = +1 / +1
Query: 151 LGILSRSFPPSAGAFNSSYAYFLKPMLQFLVENQAPFMVDLYPYYAYQNSRSNVSLNYAL 330
+ ++S++FPPS FNS++ + L+FL + FM++ PYY Y + L YAL
Sbjct: 1 MDMISKAFPPSTATFNSTWNLTMSQYLEFLRTTGSSFMLNAQPYYGYVKGQGVFPLQYAL 180
Query: 331 F 333
F
Sbjct: 181 F 183
>gb|AL504555.1|AL504555 AL504555 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW05K08V 5', mRNA sequence
Length = 663
Score = 154 bits (333), Expect(2) = 3e-046
Identities = 61/122 (50%), Positives = 84/122 (68%)
Frame = +1 / +3
Query: 352 VIDPNTGLVYTNMFDAQVDSIFFALMALNFKTLKIMITESGWPNKGAVKETGATPDNAQT 531
V DPNTGL Y NM AQVD+++ A+ AL + + ++E+GWP++G E GATP++A T
Sbjct: 135 VTDPNTGLNYDNMLYAQVDAVYSAIKALGHTDVDVKVSETGWPSRGDPDEIGATPEHAGT 314
Query: 532 YNTNLIRHVVNDSGTPAKPGEEIDVYIFSLFNENRKPGIESERNWGLFFPDKSSIYSLDW 711
Y NL+R + GTP +P IDVY+F+LFNEN KPG SERN+GLF+PD +Y++
Sbjct: 315 YIGNLLRRIEMKQGTPLRPAVPIDVYVFALFNENLKPGPASERNYGLFYPDGKPVYNVGL 494
Query: 712 TG 717
G
Sbjct: 495 RG 500
Score = 50.8 bits (105), Expect(2) = 3e-046
Identities = 17/43 (39%), Positives = 28/43 (65%)
Frame = +1 / +3
Query: 217 LKPMLQFLVENQAPFMVDLYPYYAYQNSRSNVSLNYALFSPES 345
L+P L+FL +APF+++ YP++AY++ V Y LF P +
Sbjct: 3 LQPFLKFLSATRAPFLINCYPFFAYKDDPXRVPXEYVLFQPNA 131
>gb|BU994995.1|BU994995 HM08O01r HM Hordeum vulgare subsp. vulgare cDNA clone HM08O01
5-PRIME, mRNA sequence
Length = 648
Score = 102 bits (218), Expect(2) = 3e-043
Identities = 37/93 (39%), Positives = 62/93 (66%)
Frame = +1 / +3
Query: 67 VVPAMRNVHTALKKAGLHKKITISSTHSLGILSRSFPPSAGAFNSSYAYFLKPMLQFLVE 246
++PAM++V+ AL GL ++ +++ HSL I+ S+PPSAGAF +++P+L FL
Sbjct: 111 LLPAMKSVYQALGALGLQGQVNVTTAHSLDIMGSSYPPSAGAFRPDVVPYIQPLLDFLSA 290
Query: 247 NQAPFMVDLYPYYAYQNSRSNVSLNYALFSPES 345
++PF+++ YPY+AY++ V L Y LF P +
Sbjct: 291 ARSPFLINCYPYFAYKDDPDGVPLEYVLFQPNA 389
Score = 93.2 bits (198), Expect(2) = 3e-043
Identities = 40/85 (47%), Positives = 52/85 (61%)
Frame = +1 / +3
Query: 352 VIDPNTGLVYTNMFDAQVDSIFFALMALNFKTLKIMITESGWPNKGAVKETGATPDNAQT 531
V DP TGL Y NM AQVDS++ A+ AL + + I+E+GWP++G E GATP A
Sbjct: 393 VTDPATGLNYDNMLYAQVDSVYAAVQALGHTDVDVKISETGWPSRGDPDEAGATPQYAGI 572
Query: 532 YNTNLIRHVVNDSGTPAKPGEEIDV 606
Y NL+R + GTP +P IDV
Sbjct: 573 YIGNLLRRIEMKQGTPLRPAVPIDV 647
>gb|BQ463203.1|BQ463203 HI04G07r HI Hordeum vulgare subsp. vulgare cDNA clone HI04G07
5-PRIME, mRNA sequence
Length = 481
Score = 174 bits (377), Expect = 4e-043
Identities = 68/75 (90%), Positives = 73/75 (97%)
Frame = +1 / +2
Query: 547 IRHVVNDSGTPAKPGEEIDVYIFSLFNENRKPGIESERNWGLFFPDKSSIYSLDWTGRGN 726
IRHVVNDSGTPAKPGEEIDVYIFSLFNENRKPGIESERNWGLF PD+SSIYS+DWTGRGN
Sbjct: 2 IRHVVNDSGTPAKPGEEIDVYIFSLFNENRKPGIESERNWGLFSPDQSSIYSVDWTGRGN 181
Query: 727 VDVMTGANITSANGT 771
VD+MTG N+TS+NGT
Sbjct: 182 VDIMTGGNLTSSNGT 226
Score = 138 bits (298), Expect = 2e-032
Identities = 61/76 (80%), Positives = 64/76 (84%)
Frame = -2 / -2
Query: 773 QVPLALVMFAPVITSTLPRPVQSRL*IELLSGKNSPQFLSDSMPGFLFSLNNENM*TSIS 594
QVP LV F PV+ ST PRPVQS L*+EL SG+ SPQFLSDSMPGFLFSLN E M*TSIS
Sbjct: 228 QVPFELVRFPPVMMSTFPRPVQSTL*MELWSGEKSPQFLSDSMPGFLFSLNKEKM*TSIS 49
Query: 593 SPGFAGVPLSLTTWRI 546
SPG AGVPLSLTTWRI
Sbjct: 48 SPGLAGVPLSLTTWRI 1
>gb|BI960657.1|BI960657 HVSMEn0025K09f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0025K09f, mRNA sequence
Length = 652
Score = 144 bits (311), Expect(2) = 4e-042
Identities = 60/122 (49%), Positives = 80/122 (65%)
Frame = +1 / +3
Query: 352 VIDPNTGLVYTNMFDAQVDSIFFALMALNFKTLKIMITESGWPNKGAVKETGATPDNAQT 531
V DP TGL NM AQVDS++ A+ AL + + I+E+GWP++G E GATP A
Sbjct: 150 VTDPATGLNCDNMLYAQVDSVYAAVQALGHTDVDVKISETGWPSRGDPDEAGATPQYAGI 329
Query: 532 YNTNLIRHVVNDSGTPAKPGEEIDVYIFSLFNENRKPGIESERNWGLFFPDKSSIYSLDW 711
Y NL+R + GTP +P IDVY+F+LFNEN KPG SERN+GLF+PD + +Y++
Sbjct: 330 YIGNLLRRIEMKQGTPLRPAVPIDVYVFALFNENLKPGPASERNYGLFYPDGTPVYNVGL 509
Query: 712 TG 717
G
Sbjct: 510 RG 515
Score = 47.1 bits (97), Expect(2) = 4e-042
Identities = 16/44 (36%), Positives = 28/44 (63%)
Frame = +1 / +3
Query: 214 FLKPMLQFLVENQAPFMVDLYPYYAYQNSRSNVSLNYALFSPES 345
+++ L FL ++PF+++ YPY+AY++ V L Y LF P +
Sbjct: 15 YMQGGLDFLSAARSPFLINCYPYFAYKDDPDGVPLEYVLFQPNA 146
>gb|BE060779.2|BE060779 HVSMEg0013F11f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0013F11f, mRNA sequence
Length = 688
Score = 141 bits (305), Expect(2) = 3e-040
Identities = 53/113 (46%), Positives = 78/113 (69%)
Frame = +1 / +1
Query: 370 GLVYTNMFDAQVDSIFFALMALNFKTLKIMITESGWPNKGAVKETGATPDNAQTYNTNLI 549
GLVY NM AQ+D+++ A+ A+ + + ++E+GWP+KG E GAT NA YN NL+
Sbjct: 127 GLVYDNMLYAQIDAVYAAMKAMGHADIGVRVSETGWPSKGDEDEVGATAQNAAAYNGNLM 306
Query: 550 RHVVNDSGTPAKPGEEIDVYIFSLFNENRKPGIESERNWGLFFPDKSSIYSLD 708
+ + GTP KP IDV++F+LFNEN KPG ERN+GLF+P+ S +Y+++
Sbjct: 307 QRIAMSQGTPLKPSVPIDVFVFALFNENMKPGPAFERNYGLFYPNGSPVYAIN 465
Score = 43.5 bits (89), Expect(2) = 3e-040
Identities = 14/31 (45%), Positives = 23/31 (74%)
Frame = +1 / +1
Query: 253 APFMVDLYPYYAYQNSRSNVSLNYALFSPES 345
+PF+++ YP++AY+ S +VSL Y LF P +
Sbjct: 19 SPFLINAYPFFAYKGSPGSVSLPYVLFQPNA 111
>gb|U96096.1|HVU96096 Hordeum vulgare endo-1,3-beta-glucanase (Hv34) gene, partial cds
Length = 2899
Score = 74.9 bits (158), Expect(4) = 2e-039
Identities = 25/47 (53%), Positives = 37/47 (78%)
Frame = +1 / +1
Query: 502 TGATPDNAQTYNTNLIRHVVNDSGTPAKPGEEIDVYIFSLFNENRKP 642
TGAT +NA YN N+IRH + +GTP +PG+ ++ Y+F++FNEN+KP
Sbjct: 2470 TGATVENAAAYNNNVIRHAASGAGTPRRPGKAVETYLFAMFNENQKP 2610
Score = 62.6 bits (131), Expect(4) = 2e-039
Identities = 24/73 (32%), Positives = 42/73 (57%)
Frame = +1 / +1
Query: 127 ITISSTHSLGILSRSFPPSAGAFNSSYAYFLKPMLQFLVENQAPFMVDLYPYYAYQNSRS 306
+ +++ + +L S+PPS AF+ A + P++ +L +AP +V++YPY+AY
Sbjct: 2077 VPVTTAVATSVLGVSYPPSQAAFSEGSAPVMAPLVAYLSSKKAPLVVNVYPYFAYAAEPE 2256
Query: 307 NVSLNYALFSPES 345
V L YAL + S
Sbjct: 2257 TVQLGYALLAGSS 2295
Score = 48.1 bits (99), Expect(4) = 2e-039
Identities = 18/40 (45%), Positives = 29/40 (72%)
Frame = +1 / +1
Query: 370 GLVYTNMFDAQVDSIFFALMALNFKTLKIMITESGWPNKG 489
GLVYTNMFDA +D+ A+ + L+++++E+GWP+ G
Sbjct: 2344 GLVYTNMFDAILDAAHAAVEKAGAQGLELVVSETGWPSGG 2463
Score = 32.6 bits (65), Expect(4) = 2e-039
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +1 / +1
Query: 46 PANVSALVVPAMRNVHTALKKAGL 117
P ++ V+PA+RN+ TALK AG+
Sbjct: 1999 PGDLGTHVLPAIRNIETALKAAGV 2070
>gb|M96939.1|BLYGLCNHV Hordeum vulgare glucan endo-1,3-beta-glucosidase (isoenzyme V)
mRNA, complete cds
Length = 1230
Score = 63.6 bits (133), Expect(4) = 3e-037
Identities = 23/34 (67%), Positives = 29/34 (85%)
Frame = +1 / +1
Query: 598 IDVYIFSLFNENRKPGIESERNWGLFFPDKSSIY 699
I+ YIF++FNENRKPG E ERN+GLFFP+K +Y
Sbjct: 892 IETYIFAMFNENRKPGDEVERNFGLFFPNKQPVY 993
Score = 55.8 bits (116), Expect(4) = 3e-037
Identities = 21/46 (45%), Positives = 31/46 (67%)
Frame = +1 / +1
Query: 352 VIDPNTGLVYTNMFDAQVDSIFFALMALNFKTLKIMITESGWPNKG 489
V D GL YT++FDA VDSI+ AL ++++++ESGWP+ G
Sbjct: 664 VRDNGNGLTYTSLFDAMVDSIYAALEKAGTPNVRVVVSESGWPSAG 801
Score = 53.1 bits (110), Expect(4) = 3e-037
Identities = 21/52 (40%), Positives = 32/52 (61%)
Frame = +1 / +1
Query: 40 ESPANVSALVVPAMRNVHTALKKAGLHKKITISSTHSLGILSRSFPPSAGAF 195
E PA + +++ AM+NVH AL A L I +S+ +++ SFPPS+G F
Sbjct: 358 EVPAGDTGIILLAMQNVHNALASANLSSSIKVSTAVRFDVITNSFPPSSGVF 513
Score = 38.5 bits (78), Expect(4) = 3e-037
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = +1 / +1
Query: 217 LKPMLQFLVENQAPFMVDLYPYYAYQNSR 303
L P+ +FL APF+ ++YPY+AY++ R
Sbjct: 529 LVPIARFLDSTGAPFLANVYPYFAYRDDR 615
>gb|BF263602.2|BF263602 HV_CEa0007C20f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0007C20f, mRNA sequence
Length = 816
Score = 126 bits (271), Expect(3) = 5e-037
Identities = 47/109 (43%), Positives = 68/109 (62%)
Frame = +1 / +2
Query: 355 IDPNTGLVYTNMFDAQVDSIFFALMALNFKTLKIMITESGWPNKGAVKETGATPDNAQTY 534
+DP TGL YTN+ D +D++ A+ L ++I + E+GWPN G + GA NA Y
Sbjct: 353 VDPGTGLTYTNLLDEMLDAVGAAMSKLGHGGVRIAVAETGWPNGGDYDQIGANVPNAXVY 532
Query: 535 NTNLIRHVVNDSGTPAKPGEEIDVYIFSLFNENRKPGIESERNWGLFFP 681
N NL + + GTP +PG + +FSL+NEN KPG +ER+WGL++P
Sbjct: 533 NRNLAERMARNPGTPTRPGARMPRVVFSLYNENLKPGPGTERHWGLYYP 679
Score = 43.0 bits (88), Expect(3) = 5e-037
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +1 / +2
Query: 217 LKPMLQFLVENQAPFMVDLYPYYAYQNSRSNVSLNYALFSPESQ 348
L+P+L+FL + + VD Y Y+ + S V L+YAL P ++
Sbjct: 212 LRPLLRFLEGTNSYYFVDAYTYFVWAGSNGTVPLDYALLQPATR 343
Score = 23.0 bits (44), Expect(3) = 5e-037
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = +1 / +2
Query: 67 VVPAMRNVHTALK 105
+VPAM N+H +L+
Sbjct: 53 IVPAMENLHRSLR 91
>gb|BU981210.1|BU981210 HA22P03r HA Hordeum vulgare subsp. vulgare cDNA clone HA22P03
5-PRIME, mRNA sequence
Length = 566
Score = 94.6 bits (201), Expect(4) = 1e-036
Identities = 36/97 (37%), Positives = 59/97 (60%)
Frame = +1 / +3
Query: 214 FLKPMLQFLVENQAPFMVDLYPYYAYQNSRSNVSLNYALFSPESQDVIDPNTGLVYTNMF 393
++ + + L AP + ++YPY AY+NS ++ LNYA F P + V D G VYTN+F
Sbjct: 48 YMGDVARLLAATGAPLLANVYPYIAYRNSPRDIQLNYATFQPGATAVRDAGNGHVYTNLF 227
Query: 394 DAQVDSIFFALMALNFKTLKIMITESGWPNKGAVKET 504
DA VD+++ AL ++++++E+GWP+ G T
Sbjct: 228 DAMVDAMYAALEKAGAPGVRVVVSETGWPSAGGFAAT 338
Score = 62.6 bits (131), Expect(4) = 1e-036
Identities = 21/36 (58%), Positives = 31/36 (86%)
Frame = +1 / +3
Query: 598 IDVYIFSLFNENRKPGIESERNWGLFFPDKSSIYSL 705
I+ Y+F++FNEN KPG E+ERN+GLF+P+KS +Y +
Sbjct: 414 IEAYVFAMFNENMKPGDETERNFGLFYPNKSPVYPM 521
Score = 29.4 bits (58), Expect(4) = 1e-036
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +1 / +3
Query: 508 ATPDNAQTYNTNLIRHVVNDSGTPAKPGE 594
ATP+NA+ YN +I HV + P E
Sbjct: 333 ATPENARAYNQGMIDHVARGTPNRPGPIE 419
Score = 22.1 bits (42), Expect(4) = 1e-036
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +1 / +3
Query: 169 SFPPSAGAFNSSY 207
SFPPSA F Y
Sbjct: 12 SFPPSAAVFAQPY 50
>gb|AF479647.2| Hordeum vulgare subsp. vulgare beta-1,3-glucanase gene, complete cds
Length = 2135
Score = 58.5 bits (122), Expect(5) = 4e-035
Identities = 21/46 (45%), Positives = 32/46 (69%)
Frame = +1 / +1
Query: 352 VIDPNTGLVYTNMFDAQVDSIFFALMALNFKTLKIMITESGWPNKG 489
V D N GL YT++FDA VD+++ AL +K++++ESGWP+ G
Sbjct: 1645 VRDQNNGLTYTSLFDAMVDAVYAALEKAGAPAVKVVVSESGWPSAG 1782
Score = 57.2 bits (119), Expect(5) = 4e-035
Identities = 22/47 (46%), Positives = 33/47 (70%)
Frame = +1 / +1
Query: 571 GTPAKPGEEIDVYIFSLFNENRKPGIESERNWGLFFPDKSSIYSLDW 711
G K E ++ YIF++FNEN+K G +ER++GLF PDKS Y++ +
Sbjct: 1846 GGTPKKREALETYIFAMFNENQKTGDATERSFGLFNPDKSPAYNIQF 1986
Score = 47.6 bits (98), Expect(5) = 4e-035
Identities = 15/42 (35%), Positives = 28/42 (66%)
Frame = +1 / +1
Query: 214 FLKPMLQFLVENQAPFMVDLYPYYAYQNSRSNVSLNYALFSP 339
++ + + L AP + ++YPY+AY+++ ++SLNYA F P
Sbjct: 1510 YMTDVARLLASTGAPLLANVYPYFAYRDNPGSISLNYATFQP 1635
Score = 29.8 bits (59), Expect(5) = 4e-035
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +1 / +1
Query: 127 ITISSTHSLGILSRSFPPSAGAFNSSY 207
I +S++ ++ SFPPSAG F ++Y
Sbjct: 1432 IKVSTSIRFDEVANSFPPSAGVFKNAY 1512
Score = 27.5 bits (54), Expect(5) = 4e-035
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +1 / +1
Query: 67 VVPAMRNVHTALKKAGL 117
++PAMRN++ AL AGL
Sbjct: 1375 ILPAMRNLNAALSAAGL 1425
>emb|AJ271367.1|HVU271367 Hordeum vulgare mRNA for beta-1,3-glucanase
Length = 1257
Score = 58.5 bits (122), Expect(5) = 4e-035
Identities = 21/46 (45%), Positives = 32/46 (69%)
Frame = +1 / +2
Query: 352 VIDPNTGLVYTNMFDAQVDSIFFALMALNFKTLKIMITESGWPNKG 489
V D N GL YT++FDA VD+++ AL +K++++ESGWP+ G
Sbjct: 710 VRDQNNGLTYTSLFDAMVDAVYAALEKAGAPAVKVVVSESGWPSAG 847
Score = 57.2 bits (119), Expect(5) = 4e-035
Identities = 22/47 (46%), Positives = 33/47 (70%)
Frame = +1 / +2
Query: 571 GTPAKPGEEIDVYIFSLFNENRKPGIESERNWGLFFPDKSSIYSLDW 711
G K E ++ YIF++FNEN+K G +ER++GLF PDKS Y++ +
Sbjct: 911 GGTPKKREALETYIFAMFNENQKTGDATERSFGLFNPDKSPAYNIQF 1051
Score = 47.6 bits (98), Expect(5) = 4e-035
Identities = 15/42 (35%), Positives = 28/42 (66%)
Frame = +1 / +2
Query: 214 FLKPMLQFLVENQAPFMVDLYPYYAYQNSRSNVSLNYALFSP 339
++ + + L AP + ++YPY+AY+++ ++SLNYA F P
Sbjct: 575 YMTDVARLLASTGAPLLANVYPYFAYRDNPGSISLNYATFQP 700
Score = 29.8 bits (59), Expect(5) = 4e-035
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +1 / +2
Query: 127 ITISSTHSLGILSRSFPPSAGAFNSSY 207
I +S++ ++ SFPPSAG F ++Y
Sbjct: 497 IKVSTSIRFDEVANSFPPSAGVFKNAY 577
Score = 27.5 bits (54), Expect(5) = 4e-035
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +1 / +2
Query: 67 VVPAMRNVHTALKKAGL 117
++PAMRN++ AL AGL
Sbjct: 440 ILPAMRNLNAALSAAGL 490
>gb|AF515785.1| Hordeum vulgare subsp. vulgare beta-1,3-glucanase II mRNA, complete
cds
Length = 1215
Score = 58.5 bits (122), Expect(5) = 4e-035
Identities = 21/46 (45%), Positives = 32/46 (69%)
Frame = +1 / +2
Query: 352 VIDPNTGLVYTNMFDAQVDSIFFALMALNFKTLKIMITESGWPNKG 489
V D N GL YT++FDA VD+++ AL +K++++ESGWP+ G
Sbjct: 707 VRDQNNGLTYTSLFDAMVDAVYAALEKAGAPAVKVVVSESGWPSAG 844
Score = 57.2 bits (119), Expect(5) = 4e-035
Identities = 22/47 (46%), Positives = 33/47 (70%)
Frame = +1 / +2
Query: 571 GTPAKPGEEIDVYIFSLFNENRKPGIESERNWGLFFPDKSSIYSLDW 711
G K E ++ YIF++FNEN+K G +ER++GLF PDKS Y++ +
Sbjct: 908 GGTPKKREALETYIFAMFNENQKTGDATERSFGLFNPDKSPAYNIQF 1048
Score = 47.6 bits (98), Expect(5) = 4e-035
Identities = 15/42 (35%), Positives = 28/42 (66%)
Frame = +1 / +2
Query: 214 FLKPMLQFLVENQAPFMVDLYPYYAYQNSRSNVSLNYALFSP 339
++ + + L AP + ++YPY+AY+++ ++SLNYA F P
Sbjct: 572 YMTDVARLLASTGAPLLANVYPYFAYRDNPGSISLNYATFQP 697
Score = 29.8 bits (59), Expect(5) = 4e-035
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +1 / +2
Query: 127 ITISSTHSLGILSRSFPPSAGAFNSSY 207
I +S++ ++ SFPPSAG F ++Y
Sbjct: 494 IKVSTSIRFDEVANSFPPSAGVFKNAY 574
Score = 27.5 bits (54), Expect(5) = 4e-035
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +1 / +2
Query: 67 VVPAMRNVHTALKKAGL 117
++PAMRN++ AL AGL
Sbjct: 437 ILPAMRNLNAALSAAGL 487
>gb|AL506052.1|AL506052 AL506052 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY01L20T 5',
mRNA sequence
Length = 696
Score = 113 bits (243), Expect(2) = 4e-035
Identities = 44/94 (46%), Positives = 62/94 (65%)
Frame = +1 / +2
Query: 442 KTLKIMITESGWPNKGAVKETGATPDNAQTYNTNLIRHVVNDSGTPAKPGEEIDVYIFSL 621
+ ++I I+E+GWP+ G E TP++A YN+N++R V GTP KP + VY+F+L
Sbjct: 233 RVVEIRISETGWPSAGDANEKAXTPESAXRYNSNVMRLVAEWKGTPXKPNVPLRVYVFAL 412
Query: 622 FNENRKPGIESERNWGLFFPDKSSIYSLDWTGRG 723
FNEN KPG SERN+GLF PD + +Y L + G
Sbjct: 413 FNENTKPGPASERNYGLFKPDSTPVYPLTYKPAG 514
Score = 54.4 bits (113), Expect(2) = 4e-035
Identities = 22/58 (37%), Positives = 31/58 (53%)
Frame = +1 / +1
Query: 226 MLQFLVENQAPFMVDLYPYYAYQNSRSNVSLNYALFSPESQDVIDPNTGLVYTNMFDA 399
+L + +PF+V+ YPY+ Y + + L YAL P V D NTGL Y N+ A
Sbjct: 7 ILDXHAKTGSPFLVNAYPYFXYSDDPKGIHLEYALLEPSYPGVPDANTGLHYPNLLVA 180
>gb|BJ456617.1|BJ456617 BJ456617 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak22k17 3', mRNA sequence
Length = 710
Score = 53.5 bits (111), Expect(4) = 1e-034
Identities = 21/48 (43%), Positives = 32/48 (66%)
Frame = +1 / -2
Query: 598 IDVYIFSLFNENRKPGIESERNWGLFFPDKSSIYSLDWTGRGNVDVMT 741
I+ Y+F++FNENRK E E+++GLF PDKS Y + + G++ T
Sbjct: 328 IEAYVFAMFNENRKGPAEIEKHFGLFNPDKSPAYPISF*KTGHIYTRT 185
Score = 51.7 bits (107), Expect(4) = 1e-034
Identities = 18/54 (33%), Positives = 32/54 (59%)
Frame = +1 / -2
Query: 199 SSYAYFLKPMLQFLVENQAPFMVDLYPYYAYQNSRSNVSLNYALFSPESQDVID 360
S A ++ P+ Q+L AP + ++YPY++Y ++ + +NYALF + V D
Sbjct: 709 SGAASYMAPIAQYLATTGAPLLANVYPYFSYVRDQAQIDINYALFKSQGTVVQD 548
Score = 49.9 bits (103), Expect(4) = 1e-034
Identities = 19/30 (63%), Positives = 22/30 (73%)
Frame = +1 / -2
Query: 502 TGATPDNAQTYNTNLIRHVVNDSGTPAKPG 591
T AT DNAQTYN NLI+H+ GTP +PG
Sbjct: 421 TAATTDNAQTYNQNLIKHIHVGQGTPKRPG 332
Score = 47.1 bits (97), Expect(4) = 1e-034
Identities = 18/55 (32%), Positives = 33/55 (60%)
Frame = +1 / -2
Query: 340 ESQDVIDPNTGLVYTNMFDAQVDSIFFALMALNFKTLKIMITESGWPNKGAVKET 504
+SQ + + Y N+FDA VD+ + AL + ++ ++++ESGWP++G T
Sbjct: 574 KSQGTVVQDGANAYQNLFDAIVDTFYSALESAGAGSVGVVVSESGWPSEGGTAAT 410
>gb|BQ469894.1|BQ469894 HX01C20T HX Hordeum vulgare subsp. vulgare cDNA clone HX01C20
5-PRIME, mRNA sequence
Length = 496
Score = 146 bits (314), Expect = 2e-034
Identities = 55/125 (44%), Positives = 82/125 (65%)
Frame = +1 / +2
Query: 355 IDPNTGLVYTNMFDAQVDSIFFALMALNFKTLKIMITESGWPNKGAVKETGATPDNAQTY 534
+DP TGL YTN+ D +D++ A+ L ++I + E+GWPN G + GA NA Y
Sbjct: 38 VDPGTGLTYTNLLDEMLDAVGAAMSKLGHGGVRIAVAETGWPNGGDYDQIGANVRNAAVY 217
Query: 535 NTNLIRHVVNDSGTPAKPGEEIDVYIFSLFNENRKPGIESERNWGLFFPDKSSIYSLDWT 714
N NL + + GTPA+PG + V++FSL+NEN KPG +ER+WGL++P+ ++ Y +D T
Sbjct: 218 NRNLAARMARNPGTPARPGARMPVFVFSLYNENLKPGPGTERHWGLYYPNGTAAYRVDLT 397
Query: 715 GRGNV 729
GR +V
Sbjct: 398 GRRSV 412
>gb|BM370290.2|BM370290 EBro08_SQ003_L21_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ003_L21 5', mRNA sequence
Length = 630
Score = 144 bits (311), Expect = 5e-034
Identities = 54/113 (47%), Positives = 79/113 (69%)
Frame = +1 / +1
Query: 370 GLVYTNMFDAQVDSIFFALMALNFKTLKIMITESGWPNKGAVKETGATPDNAQTYNTNLI 549
GLVY NM AQ+D+++ A+ A+ + + ++E+GWP+KG E GAT NA YN NL+
Sbjct: 64 GLVYDNMLYAQIDAVYAAMKAMGHADIGVRVSETGWPSKGDEDEVGATAQNAAAYNGNLM 243
Query: 550 RHVVNDSGTPAKPGEEIDVYIFSLFNENRKPGIESERNWGLFFPDKSSIYSLD 708
+ + GTP KP IDV++F+LFNEN KPG SERN+GLF+P+ S +Y+++
Sbjct: 244 QRIAMSQGTPLKPSVPIDVFVFALFNENMKPGPASERNYGLFYPNGSPVYAIN 402
>gb|BQ472728.1|BQ472728 HB01K17r BC Hordeum vulgare subsp. vulgare cDNA clone HB01K17
5-PRIME, mRNA sequence
Length = 675
Score = 143 bits (308), Expect = 1e-033
Identities = 53/105 (50%), Positives = 76/105 (72%)
Frame = +1 / +3
Query: 391 FDAQVDSIFFALMALNFKTLKIMITESGWPNKGAVKETGATPDNAQTYNTNLIRHVVNDS 570
FDA VD+ + ++ A+NF + +M+T SGWP +G E A DNA YNTNLIRHV+N+S
Sbjct: 12 FDAMVDAAYSSMKAMNFTGIPVMVTASGWPWRGGRNEPAADVDNALAYNTNLIRHVLNNS 191
Query: 571 GTPAKPGEEIDVYIFSLFNENRKPGIESERNWGLFFPDKSSIYSL 705
GTP++P ++ Y+F LFNE+R+ G SE+NWG+ F + S++YSL
Sbjct: 192 GTPSQPNNQVSTYLFELFNEDRRAGPVSEQNWGIMFTNASAVYSL 326
>gb|BJ461506.1|BJ461506 BJ461506 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak45f07 3', mRNA sequence
Length = 662
Score = 58.1 bits (121), Expect(4) = 2e-032
Identities = 23/44 (52%), Positives = 31/44 (70%)
Frame = +1 / -3
Query: 352 VIDPNTGLVYTNMFDAQVDSIFFALMALNFKTLKIMITESGWPN 483
V D GL YTN+FDA VDSI+ AL N +K++++ESGWP+
Sbjct: 468 VNDDGNGLTYTNLFDAMVDSIYAALEDANKPGVKLVVSESGWPS 337
Score = 55.3 bits (115), Expect(4) = 2e-032
Identities = 18/42 (42%), Positives = 28/42 (66%)
Frame = +1 / -3
Query: 214 FLKPMLQFLVENQAPFMVDLYPYYAYQNSRSNVSLNYALFSP 339
++ P+L FL AP + ++YPY+AY+ N+ LNYA F+P
Sbjct: 603 YMGPILDFLASTGAPLLANVYPYFAYKGDPQNIKLNYATFAP 478
Score = 49.0 bits (101), Expect(4) = 2e-032
Identities = 18/36 (50%), Positives = 27/36 (75%)
Frame = +1 / -3
Query: 598 IDVYIFSLFNENRKPGIESERNWGLFFPDKSSIYSL 705
++ YIF++FNEN K G E E+N+GLF P+ S Y++
Sbjct: 240 LETYIFAMFNENLKDGDELEKNFGLFKPNMSPAYAI 133
Score = 32.1 bits (64), Expect(4) = 2e-032
Identities = 13/20 (65%), Positives = 13/20 (65%)
Frame = +1 / -3
Query: 505 GATPDNAQTYNTNLIRHVVN 564
GAT NAQ YN LI HV N
Sbjct: 324 GATAQNAQAYNQGLINHVGN 265
>gb|BJ458099.1|BJ458099 BJ458099 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak30k14 3', mRNA sequence
Length = 640
Score = 58.1 bits (121), Expect(4) = 2e-032
Identities = 23/44 (52%), Positives = 31/44 (70%)
Frame = +1 / -2
Query: 352 VIDPNTGLVYTNMFDAQVDSIFFALMALNFKTLKIMITESGWPN 483
V D GL YTN+FDA VDSI+ AL N +K++++ESGWP+
Sbjct: 477 VNDDGNGLTYTNLFDAMVDSIYAALEDANKPGVKLVVSESGWPS 346
Score = 55.3 bits (115), Expect(4) = 2e-032
Identities = 18/42 (42%), Positives = 28/42 (66%)
Frame = +1 / -2
Query: 214 FLKPMLQFLVENQAPFMVDLYPYYAYQNSRSNVSLNYALFSP 339
++ P+L FL AP + ++YPY+AY+ N+ LNYA F+P
Sbjct: 612 YMGPILDFLASTGAPLLANVYPYFAYKGDPQNIKLNYATFAP 487
Score = 49.0 bits (101), Expect(4) = 2e-032
Identities = 18/36 (50%), Positives = 27/36 (75%)
Frame = +1 / -2
Query: 598 IDVYIFSLFNENRKPGIESERNWGLFFPDKSSIYSL 705
++ YIF++FNEN K G E E+N+GLF P+ S Y++
Sbjct: 249 LETYIFAMFNENLKDGDELEKNFGLFKPNMSPAYAI 142
Score = 32.1 bits (64), Expect(4) = 2e-032
Identities = 13/20 (65%), Positives = 13/20 (65%)
Frame = +1 / -2
Query: 505 GATPDNAQTYNTNLIRHVVN 564
GAT NAQ YN LI HV N
Sbjct: 333 GATAQNAQAYNQGLINHVGN 274
>gb|BJ460297.1|BJ460297 BJ460297 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak40d22 3', mRNA sequence
Length = 574
Score = 58.1 bits (121), Expect(4) = 2e-032
Identities = 23/44 (52%), Positives = 31/44 (70%)
Frame = +1 / -1
Query: 352 VIDPNTGLVYTNMFDAQVDSIFFALMALNFKTLKIMITESGWPN 483
V D GL YTN+FDA VDSI+ AL N +K++++ESGWP+
Sbjct: 391 VNDDGNGLTYTNLFDAMVDSIYAALEDANKPGVKLVVSESGWPS 260
Score = 55.3 bits (115), Expect(4) = 2e-032
Identities = 18/42 (42%), Positives = 28/42 (66%)
Frame = +1 / -1
Query: 214 FLKPMLQFLVENQAPFMVDLYPYYAYQNSRSNVSLNYALFSP 339
++ P+L FL AP + ++YPY+AY+ N+ LNYA F+P
Sbjct: 526 YMGPILDFLASTGAPLLANVYPYFAYKGDPQNIKLNYATFAP 401
Score = 49.0 bits (101), Expect(4) = 2e-032
Identities = 18/36 (50%), Positives = 27/36 (75%)
Frame = +1 / -1
Query: 598 IDVYIFSLFNENRKPGIESERNWGLFFPDKSSIYSL 705
++ YIF++FNEN K G E E+N+GLF P+ S Y++
Sbjct: 163 LETYIFAMFNENLKDGDELEKNFGLFKPNMSPAYAI 56
Score = 32.1 bits (64), Expect(4) = 2e-032
Identities = 13/20 (65%), Positives = 13/20 (65%)
Frame = +1 / -1
Query: 505 GATPDNAQTYNTNLIRHVVN 564
GAT NAQ YN LI HV N
Sbjct: 247 GATAQNAQAYNQGLINHVGN 188
>gb|BJ452749.1|BJ452749 BJ452749 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak40d22 5', mRNA sequence
Length = 553
Score = 58.1 bits (121), Expect(4) = 2e-032
Identities = 23/44 (52%), Positives = 31/44 (70%)
Frame = +1 / +3
Query: 352 VIDPNTGLVYTNMFDAQVDSIFFALMALNFKTLKIMITESGWPN 483
V D GL YTN+FDA VDSI+ AL N +K++++ESGWP+
Sbjct: 204 VNDDGNGLTYTNLFDAMVDSIYAALEDANKPGVKLVVSESGWPS 335
Score = 55.3 bits (115), Expect(4) = 2e-032
Identities = 18/42 (42%), Positives = 28/42 (66%)
Frame = +1 / +3
Query: 214 FLKPMLQFLVENQAPFMVDLYPYYAYQNSRSNVSLNYALFSP 339
++ P+L FL AP + ++YPY+AY+ N+ LNYA F+P
Sbjct: 69 YMGPILDFLASTGAPLLANVYPYFAYKGDPQNIKLNYATFAP 194
Score = 49.0 bits (101), Expect(4) = 2e-032
Identities = 18/36 (50%), Positives = 27/36 (75%)
Frame = +1 / +3
Query: 598 IDVYIFSLFNENRKPGIESERNWGLFFPDKSSIYSL 705
++ YIF++FNEN K G E E+N+GLF P+ S Y++
Sbjct: 432 LETYIFAMFNENLKDGDELEKNFGLFKPNMSPAYAI 539
Score = 32.1 bits (64), Expect(4) = 2e-032
Identities = 13/20 (65%), Positives = 13/20 (65%)
Frame = +1 / +3
Query: 505 GATPDNAQTYNTNLIRHVVN 564
GAT NAQ YN LI HV N
Sbjct: 348 GATAQNAQAYNQGLINHVGN 407
>gb|AV909148.1|AV909148 AV909148 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak11m15 5', mRNA sequence
Length = 538
Score = 58.1 bits (121), Expect(5) = 3e-032
Identities = 23/44 (52%), Positives = 31/44 (70%)
Frame = +1 / +2
Query: 352 VIDPNTGLVYTNMFDAQVDSIFFALMALNFKTLKIMITESGWPN 483
V D GL YTN+FDA VDSI+ AL N +K++++ESGWP+
Sbjct: 275 VNDDGNGLTYTNLFDAMVDSIYAALEDANKPGVKLVVSESGWPS 406
Score = 55.3 bits (115), Expect(5) = 3e-032
Identities = 18/42 (42%), Positives = 28/42 (66%)
Frame = +1 / +2
Query: 214 FLKPMLQFLVENQAPFMVDLYPYYAYQNSRSNVSLNYALFSP 339
++ P+L FL AP + ++YPY+AY+ N+ LNYA F+P
Sbjct: 140 YMGPILDFLASTGAPLLANVYPYFAYKGDPQNIKLNYATFAP 265
Score = 40.8 bits (83), Expect(5) = 3e-032
Identities = 16/42 (38%), Positives = 27/42 (64%)
Frame = +1 / +2
Query: 70 VPAMRNVHTALKKAGLHKKITISSTHSLGILSRSFPPSAGAF 195
+PAM+N+ AL AGL + +S++ +++ +FPPS G F
Sbjct: 2 LPAMKNMQKALVDAGLSGGVKVSTSVRFDVVTDTFPPSNGVF 127
Score = 32.1 bits (64), Expect(5) = 3e-032
Identities = 13/20 (65%), Positives = 13/20 (65%)
Frame = +1 / +2
Query: 505 GATPDNAQTYNTNLIRHVVN 564
GAT NAQ YN LI HV N
Sbjct: 419 GATAQNAQAYNQGLINHVGN 478
Score = 24.3 bits (47), Expect(5) = 3e-032
Identities = 7/12 (58%), Positives = 11/12 (91%)
Frame = +1 / +2
Query: 598 IDVYIFSLFNEN 633
++ YIF++FNEN
Sbjct: 503 LETYIFAMFNEN 538
>gb|M96938.1|BLYGLCNHI Hordeum vulgare glucan endo-1,3-beta-glucosidase (isoenzyme I)
mRNA, 3' end
Length = 1025
Score = 90.0 bits (191), Expect(4) = 3e-032
Identities = 34/97 (35%), Positives = 58/97 (59%)
Frame = +1 / +1
Query: 214 FLKPMLQFLVENQAPFMVDLYPYYAYQNSRSNVSLNYALFSPESQDVIDPNTGLVYTNMF 393
++ + + L AP + ++YPY+AY+++ ++ LNYA F P + V DPNTGL +F
Sbjct: 436 YMTDVARLLASTGAPLLTNVYPYFAYKDNPRDIQLNYATFRPGTTTVRDPNTGLTSQCLF 615
Query: 394 DAQVDSIFFALMALNFKTLKIMITESGWPNKGAVKET 504
DA VD++ AL ++++++ESGWP+ T
Sbjct: 616 DAMVDAVVAALERSGAPGVRVVVSESGWPSASGFAAT 726
Score = 48.1 bits (99), Expect(4) = 3e-032
Identities = 18/36 (50%), Positives = 27/36 (75%)
Frame = +1 / +1
Query: 598 IDVYIFSLFNENRKPGIESERNWGLFFPDKSSIYSL 705
++ YIF++FNEN K G +E+++GLF PDKS Y +
Sbjct: 802 LETYIFAMFNENFKTGELTEKHFGLFNPDKSPAYPI 909
Score = 28.0 bits (55), Expect(4) = 3e-032
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +1 / +1
Query: 508 ATPDNAQTYNTNLIRHV 558
AT DNA+ YN LI HV
Sbjct: 721 ATADNARAYNQGLIDHV 771
Score = 27.5 bits (54), Expect(4) = 3e-032
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +1 / +1
Query: 67 VVPAMRNVHTALKKAGL 117
+VPAMRN+ ALK GL
Sbjct: 301 IVPAMRNLGAALKAPGL 351
>gb|CA012344.1|CA012344 HT05C17r HT Hordeum vulgare subsp. vulgare cDNA clone HT05C17
5-PRIME, mRNA sequence
Length = 490
Score = 90.4 bits (192), Expect(2) = 8e-032
Identities = 37/78 (47%), Positives = 50/78 (64%)
Frame = +1 / +2
Query: 490 AVKETGATPDNAQTYNTNLIRHVVNDSGTPAKPGEEIDVYIFSLFNENRKPGIESERNWG 669
A E A DNA TYN+NLIRHV+N +GTP PG + +I+ L++E+ +PG SE+ WG
Sbjct: 158 ASAEPDANNDNADTYNSNLIRHVMNVTGTPKHPGVAVPTFIYELYDEDTRPGTASEKYWG 337
Query: 670 LFFPDKSSIYSLDWTGRG 723
LF + Y+L TG G
Sbjct: 338 LFDMNGIPAYALHLTGSG 391
Score = 66.7 bits (140), Expect(2) = 8e-032
Identities = 24/48 (50%), Positives = 36/48 (75%)
Frame = +1 / +2
Query: 346 QDVIDPNTGLVYTNMFDAQVDSIFFALMALNFKTLKIMITESGWPNKG 489
++ +D NT L YTN+FDA VD+ +FA+ LN + +M+TE+GWP+KG
Sbjct: 11 KEAVDANTLLHYTNVFDAVVDAAYFAMAYLNVTNVPVMVTETGWPHKG 154
>gb|BJ452679.1|BJ452679 BJ452679 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak39p16 5', mRNA sequence
Length = 598
Score = 55.8 bits (116), Expect(4) = 9e-032
Identities = 22/44 (50%), Positives = 30/44 (68%)
Frame = +1 / +3
Query: 352 VIDPNTGLVYTNMFDAQVDSIFFALMALNFKTLKIMITESGWPN 483
V D GL YTN+FDA VDS + AL N +K++++ESGWP+
Sbjct: 192 VNDDGNGLTYTNLFDAMVDSTYAALEDANKPGVKLVVSESGWPS 323
Score = 55.3 bits (115), Expect(4) = 9e-032
Identities = 18/42 (42%), Positives = 28/42 (66%)
Frame = +1 / +3
Query: 214 FLKPMLQFLVENQAPFMVDLYPYYAYQNSRSNVSLNYALFSP 339
++ P+L FL AP + ++YPY+AY+ N+ LNYA F+P
Sbjct: 57 YMGPILDFLASTGAPLLANVYPYFAYKGDPQNIKLNYATFAP 182
Score = 49.0 bits (101), Expect(4) = 9e-032
Identities = 18/36 (50%), Positives = 27/36 (75%)
Frame = +1 / +3
Query: 598 IDVYIFSLFNENRKPGIESERNWGLFFPDKSSIYSL 705
++ YIF++FNEN K G E E+N+GLF P+ S Y++
Sbjct: 420 LETYIFAMFNENLKDGDELEKNFGLFKPNMSPAYAI 527
Score = 32.1 bits (64), Expect(4) = 9e-032
Identities = 13/20 (65%), Positives = 13/20 (65%)
Frame = +1 / +3
Query: 505 GATPDNAQTYNTNLIRHVVN 564
GAT NAQ YN LI HV N
Sbjct: 336 GATAQNAQAYNQGLINHVGN 395
>gb|BJ456958.1|BJ456958 BJ456958 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak25g07 3', mRNA sequence
Length = 464
Score = 58.1 bits (121), Expect(4) = 9e-032
Identities = 23/44 (52%), Positives = 31/44 (70%)
Frame = +1 / -3
Query: 352 VIDPNTGLVYTNMFDAQVDSIFFALMALNFKTLKIMITESGWPN 483
V D GL YTN+FDA VDSI+ AL N +K++++ESGWP+
Sbjct: 333 VNDDGNGLTYTNLFDAMVDSIYAALEDANKPGVKLVVSESGWPS 202
Score = 54.0 bits (112), Expect(4) = 9e-032
Identities = 18/39 (46%), Positives = 26/39 (66%)
Frame = +1 / -3
Query: 223 PMLQFLVENQAPFMVDLYPYYAYQNSRSNVSLNYALFSP 339
P+L FL AP + ++YPY+AY+ N+ LNYA F+P
Sbjct: 459 PILDFLASTGAPLLANVYPYFAYKGDPQNIKLNYATFAP 343
Score = 48.1 bits (99), Expect(4) = 9e-032
Identities = 18/35 (51%), Positives = 26/35 (74%)
Frame = +1 / -3
Query: 598 IDVYIFSLFNENRKPGIESERNWGLFFPDKSSIYS 702
++ YIF++FNEN K G E E+N+GLF P+ S Y+
Sbjct: 105 LETYIFAMFNENLKDGDELEKNFGLFKPNMSPAYA 1
Score = 32.1 bits (64), Expect(4) = 9e-032
Identities = 13/20 (65%), Positives = 13/20 (65%)
Frame = +1 / -3
Query: 505 GATPDNAQTYNTNLIRHVVN 564
GAT NAQ YN LI HV N
Sbjct: 189 GATAQNAQAYNQGLINHVGN 130
>gb|BQ664706.1|BQ664706 HV04H18u HV Hordeum vulgare subsp. vulgare cDNA clone HV04H18
3-PRIME, mRNA sequence
Length = 619
Score = 136 bits (294), Expect = 1e-031
Identities = 53/122 (43%), Positives = 79/122 (64%)
Frame = +1 / -1
Query: 352 VIDPNTGLVYTNMFDAQVDSIFFALMALNFKTLKIMITESGWPNKGAVKETGATPDNAQT 531
++DPNT L Y NMFDAQ+D+ + AL A + +++ + E+GW + G E GA+ +NA+T
Sbjct: 604 ILDPNTSLHYDNMFDAQIDAAYAALQAAGYNNMEVRVAETGWASSGDQSEAGASVENART 425
Query: 532 YNTNLIRHVVNDSGTPAKPGEEIDVYIFSLFNENRKPGIESERNWGLFFPDKSSIYSLDW 711
YN NL + + GTP KP + YIF+LFNEN K G +E+++GLF PD Y + +
Sbjct: 424 YNYNLRKRLFLRKGTPLKPNIPVKAYIFALFNENLKNGDPTEKHYGLFNPDGRISYDIGY 245
Query: 712 TG 717
+G
Sbjct: 244 SG 239
>gb|CB879505.1|CB879505 HP02I04w HP Hordeum vulgare subsp. vulgare cDNA clone HP02I04
3-PRIME, mRNA sequence
Length = 680
Score = 97.3 bits (207), Expect(3) = 2e-031
Identities = 36/97 (37%), Positives = 60/97 (61%)
Frame = +1 / -3
Query: 214 FLKPMLQFLVENQAPFMVDLYPYYAYQNSRSNVSLNYALFSPESQDVIDPNTGLVYTNMF 393
++ + + L AP + ++YPY+AY+++ ++ LNYA F P + V DPNTGL YT +F
Sbjct: 672 YMTDVARLLASTGAPLLTNVYPYFAYKDNPRDIQLNYATFRPGTTTVRDPNTGLTYTCLF 493
Query: 394 DAQVDSIFFALMALNFKTLKIMITESGWPNKGAVKET 504
DA VD++ AL ++++++ESGWP+ T
Sbjct: 492 DAMVDAVVAALERAGAPGVRVVVSESGWPSASGFAAT 382
Score = 48.1 bits (99), Expect(3) = 2e-031
Identities = 18/36 (50%), Positives = 27/36 (75%)
Frame = +1 / -3
Query: 598 IDVYIFSLFNENRKPGIESERNWGLFFPDKSSIYSL 705
++ YIF++FNEN K G +E+++GLF PDKS Y +
Sbjct: 306 LETYIFAMFNENFKTGELTEKHFGLFNPDKSPAYPI 199
Score = 28.0 bits (55), Expect(3) = 2e-031
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +1 / -3
Query: 508 ATPDNAQTYNTNLIRHV 558
AT DNA+ YN LI HV
Sbjct: 387 ATADNARAYNQGLIDHV 337
>gb|BU981251.1|BU981251 HA23B03r HA Hordeum vulgare subsp. vulgare cDNA clone HA23B03
5-PRIME, mRNA sequence
Length = 487
Score = 94.6 bits (201), Expect(4) = 3e-031
Identities = 36/97 (37%), Positives = 59/97 (60%)
Frame = +1 / +3
Query: 214 FLKPMLQFLVENQAPFMVDLYPYYAYQNSRSNVSLNYALFSPESQDVIDPNTGLVYTNMF 393
++ + + L AP + ++YPY AY+NS ++ LNYA F P + V D G VYTN+F
Sbjct: 48 YMGDVARLLAATGAPLLANVYPYIAYRNSPRDIQLNYATFQPGATAVRDAGNGHVYTNLF 227
Query: 394 DAQVDSIFFALMALNFKTLKIMITESGWPNKGAVKET 504
DA VD+++ AL ++++++E+GWP+ G T
Sbjct: 228 DAMVDAMYAALEKAGAPGVRVVVSETGWPSAGGFAAT 338
Score = 44.4 bits (91), Expect(4) = 3e-031
Identities = 15/24 (62%), Positives = 21/24 (87%)
Frame = +1 / +3
Query: 598 IDVYIFSLFNENRKPGIESERNWG 669
I+ Y+F++FNEN KPG E+ERN+G
Sbjct: 414 IEAYVFAMFNENMKPGDETERNFG 485
Score = 29.4 bits (58), Expect(4) = 3e-031
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +1 / +3
Query: 508 ATPDNAQTYNTNLIRHVVNDSGTPAKPGE 594
ATP+NA+ YN +I HV + P E
Sbjct: 333 ATPENARAYNQGMIDHVARGTPNRPGPIE 419
Score = 22.1 bits (42), Expect(4) = 3e-031
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +1 / +3
Query: 169 SFPPSAGAFNSSY 207
SFPPSA F Y
Sbjct: 12 SFPPSAAVFAQPY 50
>gb|AV931182.1|AV931182 AV931182 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd18n18 3', mRNA sequence
Length = 690
Score = 54.9 bits (114), Expect(4) = 6e-031
Identities = 21/40 (52%), Positives = 29/40 (72%)
Frame = +1 / -3
Query: 364 NTGLVYTNMFDAQVDSIFFALMALNFKTLKIMITESGWPN 483
+ GL YTN+FDA VDSI+ AL +K++I+ESGWP+
Sbjct: 496 DNGLTYTNLFDAMVDSIYAALEKAGTPGVKVVISESGWPS 377
Score = 54.9 bits (114), Expect(4) = 6e-031
Identities = 20/49 (40%), Positives = 32/49 (65%)
Frame = +1 / -3
Query: 214 FLKPMLQFLVENQAPFMVDLYPYYAYQNSRSNVSLNYALFSPESQDVID 360
FL+P+L FL AP + ++YPY+AY+ + ++ L++A F P S V D
Sbjct: 640 FLRPILNFLASTGAPLLANVYPYFAYKGNPRDIQLSFATFVPGSTTVND 494
Score = 49.4 bits (102), Expect(4) = 6e-031
Identities = 19/41 (46%), Positives = 28/41 (68%)
Frame = +1 / -3
Query: 583 KPGEEIDVYIFSLFNENRKPGIESERNWGLFFPDKSSIYSL 705
K ++ YIF++FNEN K G E E+N+GLF P+ S Y++
Sbjct: 295 KKSGALETYIFAMFNENLKDGDELEKNFGLFKPNMSPAYAI 173
Score = 30.3 bits (60), Expect(4) = 6e-031
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = +1 / -3
Query: 505 GATPDNAQTYNTNLIRHVVN 564
GAT NA+ YN LI HV N
Sbjct: 364 GATAQNARAYNQGLINHVGN 305
>gb|AV911030.1|AV911030 AV911030 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak11m15 3', mRNA sequence
Length = 649
Score = 58.1 bits (121), Expect(4) = 6e-031
Identities = 23/44 (52%), Positives = 31/44 (70%)
Frame = +1 / -1
Query: 352 VIDPNTGLVYTNMFDAQVDSIFFALMALNFKTLKIMITESGWPN 483
V D GL YTN+FDA VDSI+ AL N +K++++ESGWP+
Sbjct: 529 VNDDGNGLTYTNLFDAMVDSIYAALEDANKPGVKLVVSESGWPS 398
Score = 50.3 bits (104), Expect(4) = 6e-031
Identities = 17/37 (45%), Positives = 24/37 (64%)
Frame = +1 / -1
Query: 229 LQFLVENQAPFMVDLYPYYAYQNSRSNVSLNYALFSP 339
L FL AP + ++YPY+AY+ N+ LNYA F+P
Sbjct: 649 LDFLASTGAPLLANVYPYFAYKGDPQNIKLNYATFAP 539
Score = 49.0 bits (101), Expect(4) = 6e-031
Identities = 18/36 (50%), Positives = 27/36 (75%)
Frame = +1 / -1
Query: 598 IDVYIFSLFNENRKPGIESERNWGLFFPDKSSIYSL 705
++ YIF++FNEN K G E E+N+GLF P+ S Y++
Sbjct: 301 LETYIFAMFNENLKDGDELEKNFGLFKPNMSPAYAI 194
Score = 32.1 bits (64), Expect(4) = 6e-031
Identities = 13/20 (65%), Positives = 13/20 (65%)
Frame = +1 / -1
Query: 505 GATPDNAQTYNTNLIRHVVN 564
GAT NAQ YN LI HV N
Sbjct: 385 GATAQNAQAYNQGLINHVGN 326
>gb|BF265292.2|BF265292 HV_CEa0011J05f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0011J05f, mRNA sequence
Length = 523
Score = 134 bits (288), Expect = 7e-031
Identities = 50/116 (43%), Positives = 76/116 (65%)
Frame = +1 / +1
Query: 373 LVYTNMFDAQVDSIFFALMALNFKTLKIMITESGWPNKGAVKETGATPDNAQTYNTNLIR 552
L YTN+ D +D++ A+ L ++I + E+GWPN G + GA NA YN NL
Sbjct: 1 LTYTNLLDEMLDAVGAAMSKLGHGGVRIAVAETGWPNGGDYDQIGANVRNAAVYNRNLAA 180
Query: 553 HVVNDSGTPAKPGEEIDVYIFSLFNENRKPGIESERNWGLFFPDKSSIYSLDWTGR 720
+ + GTPA+PG + V++FSL+NEN KPG +ER+WGL++P+ +++Y +D TGR
Sbjct: 181 RMARNPGTPARPGARMPVFVFSLYNENLKPGPGTERHWGLYYPNGTAVYRVDLTGR 348
>gb|BM816843.1|BM816843 HC03E07_T3.ab1 HC Hordeum vulgare subsp. vulgare cDNA clone
HC03E07_T3.ab1 similar to Glucosylceramidase,Glucan
endo-1,2-beta-glucosidase,Glucan
endo-1,6-beta-glucosidase, mRNA sequence
Length = 833
Score = 119 bits (255), Expect(3) = 1e-030
Identities = 48/118 (40%), Positives = 73/118 (61%)
Frame = +1 / +3
Query: 352 VIDPNTGLVYTNMFDAQVDSIFFALMALNFKTLKIMITESGWPNKGAVKETGATPDNAQT 531
+ DP T L YT+MFDAQ+D+I+ A+ L + + I + E+GWP + + G A+
Sbjct: 87 IYDPATKLNYTSMFDAQMDAIYTAMKKLGYGDVDIAVGEAGWPTQAEPGQIGVGVQEARD 266
Query: 532 YNTNLIRHVVNDSGTPAKPGEEIDVYIFSLFNENRKPGIESERNWGLFFPDKSSIYSL 705
+N +IR + GTP P + Y+FSLF+EN+KPG +ER++GLF PD + +Y L
Sbjct: 267 FNEGMIRVCSSGKGTPLMPNRTFETYLFSLFDENQKPGPIAERHFGLFNPDFTPVYDL 440
Score = 29.8 bits (59), Expect(3) = 1e-030
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +1 / +3
Query: 253 APFMVDLYPYYAYQNSRSNVSL 318
+PFMV+ YPY++Y+ N +L
Sbjct: 3 SPFMVNPYPYFSYRPETLNYAL 68
Score = 22.1 bits (42), Expect(3) = 1e-030
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +1 / +3
Query: 313 SLNYALFSPES 345
+LNYALF P S
Sbjct: 51 TLNYALFRPNS 83
>gb|BG415032.1|BG415032 HVSMEk0004M09f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0004M09f, mRNA sequence
Length = 694
Score = 111 bits (238), Expect(3) = 7e-030
Identities = 46/118 (38%), Positives = 71/118 (60%)
Frame = +1 / +1
Query: 352 VIDPNTGLVYTNMFDAQVDSIFFALMALNFKTLKIMITESGWPNKGAVKETGATPDNAQT 531
+ DP T L YT+MFDAQ+D+I+ A+ L + + I + E+GWP + + G A+
Sbjct: 226 IYDPATKLNYTSMFDAQMDAIYTAMKKLGYGDVDIAVGEAGWPTQAEPGQIGVGVQEARD 405
Query: 532 YNTNLIRHVVNDSGTPAKPGEEIDVYIFSLFNENRKPGIESERNWGLFFPDKSSIYSL 705
+N +IR + GTP + Y+FSLF+EN+KP +ER++GLF PD + +Y L
Sbjct: 406 FNEGMIRVCSSGKGTPLMHNRTFETYLFSLFDENQKPEPIAERHFGLFNPDFTHVYDL 579
Score = 34.8 bits (70), Expect(3) = 7e-030
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +1 / +1
Query: 226 MLQFLVENQAPFMVDLYPYYAYQNSRSNVSL 318
+LQF + +PFMV+ YPY++Y+ N +L
Sbjct: 115 LLQFHRDTGSPFMVNPYPYFSYRPETLNYAL 207
Score = 22.1 bits (42), Expect(3) = 7e-030
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +1 / +1
Query: 313 SLNYALFSPES 345
+LNYALF P S
Sbjct: 190 TLNYALFRPNS 222
>gb|BJ449523.1|BJ449523 BJ449523 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak25g07 5', mRNA sequence
Length = 477
Score = 58.1 bits (121), Expect(4) = 2e-029
Identities = 23/44 (52%), Positives = 31/44 (70%)
Frame = +1 / +3
Query: 352 VIDPNTGLVYTNMFDAQVDSIFFALMALNFKTLKIMITESGWPN 483
V D GL YTN+FDA VDSI+ AL N +K++++ESGWP+
Sbjct: 174 VNDDGNGLTYTNLFDAMVDSIYAALEDANKPGVKLVVSESGWPS 305
Score = 55.3 bits (115), Expect(4) = 2e-029
Identities = 18/42 (42%), Positives = 28/42 (66%)
Frame = +1 / +3
Query: 214 FLKPMLQFLVENQAPFMVDLYPYYAYQNSRSNVSLNYALFSP 339
++ P+L FL AP + ++YPY+AY+ N+ LNYA F+P
Sbjct: 39 YMGPILDFLASTGAPLLANVYPYFAYKGDPQNIKLNYATFAP 164
Score = 38.9 bits (79), Expect(4) = 2e-029
Identities = 14/25 (56%), Positives = 20/25 (80%)
Frame = +1 / +3
Query: 598 IDVYIFSLFNENRKPGIESERNWGL 672
++ YIF++FNEN K G E E+N+GL
Sbjct: 402 LETYIFAMFNENLKDGDELEKNFGL 476
Score = 32.1 bits (64), Expect(4) = 2e-029
Identities = 13/20 (65%), Positives = 13/20 (65%)
Frame = +1 / +3
Query: 505 GATPDNAQTYNTNLIRHVVN 564
GAT NAQ YN LI HV N
Sbjct: 318 GATAQNAQAYNQGLINHVGN 377
>gb|BU980481.1|BU980481 HA20M14r HA Hordeum vulgare subsp. vulgare cDNA clone HA20M14
5-PRIME, mRNA sequence
Length = 502
Score = 94.6 bits (201), Expect(4) = 2e-029
Identities = 36/97 (37%), Positives = 59/97 (60%)
Frame = +1 / +3
Query: 214 FLKPMLQFLVENQAPFMVDLYPYYAYQNSRSNVSLNYALFSPESQDVIDPNTGLVYTNMF 393
++ + + L AP + ++YPY AY+NS ++ LNYA F P + V D G VYTN+F
Sbjct: 81 YMGDVARLLAATGAPLLANVYPYIAYRNSPRDIQLNYATFQPGATAVRDAGNGHVYTNLF 260
Query: 394 DAQVDSIFFALMALNFKTLKIMITESGWPNKGAVKET 504
DA VD+++ AL ++++++E+GWP+ G T
Sbjct: 261 DAMVDAMYAALEKAGAPGVRVVVSETGWPSAGGFAAT 371
Score = 33.5 bits (67), Expect(4) = 2e-029
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = +1 / +3
Query: 598 IDVYIFSLFNENRKPGIE 651
I+ Y+F++FNEN KPG E
Sbjct: 447 IEAYVFAMFNENMKPGDE 500
Score = 29.4 bits (58), Expect(4) = 2e-029
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +1 / +3
Query: 508 ATPDNAQTYNTNLIRHVVNDSGTPAKPGE 594
ATP+NA+ YN +I HV + P E
Sbjct: 366 ATPENARAYNQGMIDHVARGTPNRPGPIE 452
Score = 26.6 bits (52), Expect(4) = 2e-029
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +1 / +3
Query: 136 SSTHSLGILSRSFPPSAGAFNSSY 207
S+ L +++ SFPPSA F Y
Sbjct: 12 STAVRLDVIANSFPPSAAVFAQPY 83
>gb|BJ453971.1|BJ453971 BJ453971 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak45f07 5', mRNA sequence
Length = 499
Score = 58.1 bits (121), Expect(4) = 4e-029
Identities = 23/44 (52%), Positives = 31/44 (70%)
Frame = +1 / +3
Query: 352 VIDPNTGLVYTNMFDAQVDSIFFALMALNFKTLKIMITESGWPN 483
V D GL YTN+FDA VDSI+ AL N +K++++ESGWP+
Sbjct: 285 VNDDGNGLTYTNLFDAMVDSIYAALEDANKPGVKLVVSESGWPS 416
Score = 55.3 bits (115), Expect(4) = 4e-029
Identities = 18/42 (42%), Positives = 28/42 (66%)
Frame = +1 / +3
Query: 214 FLKPMLQFLVENQAPFMVDLYPYYAYQNSRSNVSLNYALFSP 339
++ P+L FL AP + ++YPY+AY+ N+ LNYA F+P
Sbjct: 150 YMGPILDFLASTGAPLLANVYPYFAYKGDPQNIKLNYATFAP 275
Score = 37.6 bits (76), Expect(4) = 4e-029
Identities = 14/41 (34%), Positives = 26/41 (63%)
Frame = +1 / +3
Query: 73 PAMRNVHTALKKAGLHKKITISSTHSLGILSRSFPPSAGAF 195
P+++N+ AL AGL + +S++ +++ +FPPS G F
Sbjct: 15 PSLKNMQKALVDAGLSGGVKVSTSVRFDVVTDTFPPSNGVF 137
Score = 32.1 bits (64), Expect(4) = 4e-029
Identities = 13/20 (65%), Positives = 13/20 (65%)
Frame = +1 / +3
Query: 505 GATPDNAQTYNTNLIRHVVN 564
GAT NAQ YN LI HV N
Sbjct: 429 GATAQNAQAYNQGLINHVGN 488
>gb|CA017450.1|CA017450 HV05D22r HV Hordeum vulgare subsp. vulgare cDNA clone HV05D22
5-PRIME, mRNA sequence
Length = 492
Score = 61.3 bits (128), Expect(3) = 2e-028
Identities = 24/63 (38%), Positives = 37/63 (58%)
Frame = +1 / +3
Query: 157 ILSRSFPPSAGAFNSSYAYFLKPMLQFLVENQAPFMVDLYPYYAYQNSRSNVSLNYALFS 336
+L S+PPS AF+ A + P++ +L +AP +V++YPY+AY V L YAL +
Sbjct: 18 VLGVSYPPSQAAFSEGSAPVMAPLVAYLSSKKAPLLVNVYPYFAYAAEPETVQLGYALLA 197
Query: 337 PES 345
S
Sbjct: 198 GSS 206
Score = 54.4 bits (113), Expect(3) = 2e-028
Identities = 18/37 (48%), Positives = 27/37 (72%)
Frame = +1 / +3
Query: 502 TGATPDNAQTYNTNLIRHVVNDSGTPAKPGEEIDVYI 612
TGAT +NA YN N+IRH + +GTP +PG+ ++ Y+
Sbjct: 381 TGATVENAAAYNNNVIRHAASGAGTPRRPGKAVETYL 491
Score = 48.1 bits (99), Expect(3) = 2e-028
Identities = 18/40 (45%), Positives = 29/40 (72%)
Frame = +1 / +3
Query: 370 GLVYTNMFDAQVDSIFFALMALNFKTLKIMITESGWPNKG 489
GLVYTNMFDA +D+ A+ + L+++++E+GWP+ G
Sbjct: 255 GLVYTNMFDAILDAAHAAVEKAGAQGLELVVSETGWPSGG 374
>emb|X52572.1|HVBDG Barley DNA for (1-3,1-4)-beta-D-glucanase (EC 3.2.1.73)
Length = 6260
Score = 66.7 bits (140), Expect(5) = 2e-028
Identities = 30/82 (36%), Positives = 47/82 (57%)
Frame = +1 / +3
Query: 127 ITISSTHSLGILSRSFPPSAGAFNSSYAYFLKPMLQFLVENQAPFMVDLYPYYAYQNSRS 306
I ++++ S IL PPSAG+F F+ P++QFL AP M ++YPY A+ + S
Sbjct: 4911 IKVTTSVSQAILGVYSPPSAGSFTGEADAFMGPVVQFLARTGAPLMANIYPYLAWAYNPS 5090
Query: 307 NVSLNYALFSPESQDVIDPNTG 372
+ ++YALF+ V D + G
Sbjct: 5091 AMDMSYALFTASGTVVQDGSYG 5156
Score = 44.9 bits (92), Expect(5) = 2e-028
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +1 / +3
Query: 379 YTNMFDAQVDSIFFALMALNFKTLKIMITESGWPNKGAVKETGA 510
Y N+FD VD+ + A+ +K++++ESGWP+ G T A
Sbjct: 5157 YQNLFDTTVDAFYTAMAKHGGSNVKLVVSESGWPSAGGTAATPA 5288
Score = 30.3 bits (60), Expect(5) = 2e-028
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = +1 / +3
Query: 655 ERNWGLFFPDKSSIYSLDW 711
E+NWGLF+P+ +Y + +
Sbjct: 5412 EQNWGLFYPNMQHVYPISF 5468
Score = 28.9 bits (57), Expect(5) = 2e-028
Identities = 9/14 (64%), Positives = 13/14 (92%)
Frame = +1 / +3
Query: 598 IDVYIFSLFNENRK 639
I+ Y+FS+FNEN+K
Sbjct: 5358 IETYVFSMFNENQK 5399
Score = 26.6 bits (52), Expect(5) = 2e-028
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +1 / +3
Query: 67 VVPAMRNVHTALKKAGL 117
+VPAM+NV AL AGL
Sbjct: 4854 LVPAMKNVQGALASAGL 4904
>emb|X56775.1|HVGLB1 H.vulgare Glb 1 gene for 1-3,1-4-beta-D-glucanase
Length = 4849
Score = 66.7 bits (140), Expect(5) = 2e-028
Identities = 30/82 (36%), Positives = 47/82 (57%)
Frame = +1 / +1
Query: 127 ITISSTHSLGILSRSFPPSAGAFNSSYAYFLKPMLQFLVENQAPFMVDLYPYYAYQNSRS 306
I ++++ S IL PPSAG+F F+ P++QFL AP M ++YPY A+ + S
Sbjct: 3904 IKVTTSVSQAILGVYSPPSAGSFTGEADAFMGPVVQFLARTGAPLMANIYPYLAWAYNPS 4083
Query: 307 NVSLNYALFSPESQDVIDPNTG 372
+ ++YALF+ V D + G
Sbjct: 4084 AMDMSYALFTASGTVVQDGSYG 4149
Score = 44.9 bits (92), Expect(5) = 2e-028
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +1 / +1
Query: 379 YTNMFDAQVDSIFFALMALNFKTLKIMITESGWPNKGAVKETGA 510
Y N+FD VD+ + A+ +K++++ESGWP+ G T A
Sbjct: 4150 YQNLFDTTVDAFYTAMAKHGGSNVKLVVSESGWPSAGGTAATPA 4281
Score = 30.3 bits (60), Expect(5) = 2e-028
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = +1 / +1
Query: 655 ERNWGLFFPDKSSIYSLDW 711
E+NWGLF+P+ +Y + +
Sbjct: 4405 EQNWGLFYPNMQHVYPISF 4461
Score = 28.9 bits (57), Expect(5) = 2e-028
Identities = 9/14 (64%), Positives = 13/14 (92%)
Frame = +1 / +1
Query: 598 IDVYIFSLFNENRK 639
I+ Y+FS+FNEN+K
Sbjct: 4351 IETYVFSMFNENQK 4392
Score = 26.6 bits (52), Expect(5) = 2e-028
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +1 / +1
Query: 67 VVPAMRNVHTALKKAGL 117
+VPAM+NV AL AGL
Sbjct: 3847 LVPAMKNVQGALASAGL 3897
>emb|X56260.1|HVGLUEND Barley DNA for (1,3;1,4)-beta-glucanase.(EC number 3.2.1.73)
Length = 4643
Score = 66.7 bits (140), Expect(5) = 2e-028
Identities = 30/82 (36%), Positives = 47/82 (57%)
Frame = +1 / +3
Query: 127 ITISSTHSLGILSRSFPPSAGAFNSSYAYFLKPMLQFLVENQAPFMVDLYPYYAYQNSRS 306
I ++++ S IL PPSAG+F F+ P++QFL AP M ++YPY A+ + S
Sbjct: 3504 IKVTTSVSQAILGVYSPPSAGSFTGEADAFMGPVVQFLARTGAPLMANIYPYLAWAYNPS 3683
Query: 307 NVSLNYALFSPESQDVIDPNTG 372
+ ++YALF+ V D + G
Sbjct: 3684 AMDMSYALFTASGTVVQDGSYG 3749
Score = 44.9 bits (92), Expect(5) = 2e-028
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +1 / +3
Query: 379 YTNMFDAQVDSIFFALMALNFKTLKIMITESGWPNKGAVKETGA 510
Y N+FD VD+ + A+ +K++++ESGWP+ G T A
Sbjct: 3750 YQNLFDTTVDAFYTAMAKHGGSNVKLVVSESGWPSAGGTAATPA 3881
Score = 30.3 bits (60), Expect(5) = 2e-028
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = +1 / +3
Query: 655 ERNWGLFFPDKSSIYSLDW 711
E+NWGLF+P+ +Y + +
Sbjct: 4005 EQNWGLFYPNMQHVYPISF 4061
Score = 28.9 bits (57), Expect(5) = 2e-028
Identities = 9/14 (64%), Positives = 13/14 (92%)
Frame = +1 / +3
Query: 598 IDVYIFSLFNENRK 639
I+ Y+FS+FNEN+K
Sbjct: 3951 IETYVFSMFNENQK 3992
Score = 26.6 bits (52), Expect(5) = 2e-028
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +1 / +3
Query: 67 VVPAMRNVHTALKKAGL 117
+VPAM+NV AL AGL
Sbjct: 3447 LVPAMKNVQGALASAGL 3497
>gb|CA018533.1|CA018533 HV08O12r HV Hordeum vulgare subsp. vulgare cDNA clone HV08O12
5-PRIME, mRNA sequence
Length = 645
Score = 66.7 bits (140), Expect(5) = 2e-028
Identities = 30/82 (36%), Positives = 47/82 (57%)
Frame = +1 / +2
Query: 127 ITISSTHSLGILSRSFPPSAGAFNSSYAYFLKPMLQFLVENQAPFMVDLYPYYAYQNSRS 306
I ++++ S IL PPSAG+F F+ P++QFL AP M ++YPY A+ + S
Sbjct: 74 IKVTTSVSQAILGVYSPPSAGSFTGEADAFMGPVVQFLARTGAPLMANIYPYLAWAYNPS 253
Query: 307 NVSLNYALFSPESQDVIDPNTG 372
+ ++YALF+ V D + G
Sbjct: 254 AMDMSYALFTASGTVVQDGSYG 319
Score = 44.9 bits (92), Expect(5) = 2e-028
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +1 / +2
Query: 379 YTNMFDAQVDSIFFALMALNFKTLKIMITESGWPNKGAVKETGA 510
Y N+FD VD+ + A+ +K++++ESGWP+ G T A
Sbjct: 320 YQNLFDTTVDAFYTAMAKHGGSNVKLVVSESGWPSAGGTAATPA 451
Score = 30.3 bits (60), Expect(5) = 2e-028
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = +1 / +2
Query: 655 ERNWGLFFPDKSSIYSLDW 711
E+NWGLF+P+ +Y + +
Sbjct: 575 EQNWGLFYPNMQHVYPISF 631
Score = 28.9 bits (57), Expect(5) = 2e-028
Identities = 9/14 (64%), Positives = 13/14 (92%)
Frame = +1 / +2
Query: 598 IDVYIFSLFNENRK 639
I+ Y+FS+FNEN+K
Sbjct: 521 IETYVFSMFNENQK 562
Score = 26.6 bits (52), Expect(5) = 2e-028
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +1 / +2
Query: 67 VVPAMRNVHTALKKAGL 117
+VPAM+NV AL AGL
Sbjct: 17 LVPAMKNVQGALASAGL 67
>gb|BE601595.2|BE601595 HVSMEh0098M24f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0098M24f, mRNA sequence
Length = 636
Score = 58.5 bits (122), Expect(3) = 2e-028
Identities = 21/46 (45%), Positives = 32/46 (69%)
Frame = +1 / +2
Query: 352 VIDPNTGLVYTNMFDAQVDSIFFALMALNFKTLKIMITESGWPNKG 489
V D N GL YT++FDA VD+++ AL +K++++ESGWP+ G
Sbjct: 149 VRDQNNGLTYTSLFDAMVDAVYAALEKAGAPAVKVVVSESGWPSAG 286
Score = 57.2 bits (119), Expect(3) = 2e-028
Identities = 22/47 (46%), Positives = 33/47 (70%)
Frame = +1 / +2
Query: 571 GTPAKPGEEIDVYIFSLFNENRKPGIESERNWGLFFPDKSSIYSLDW 711
G K E ++ YIF++FNEN+K G +ER++GLF PDKS Y++ +
Sbjct: 350 GGTPKKREALETYIFAMFNENQKTGDATERSFGLFNPDKSPAYNIQF 490
Score = 47.6 bits (98), Expect(3) = 2e-028
Identities = 15/42 (35%), Positives = 28/42 (66%)
Frame = +1 / +2
Query: 214 FLKPMLQFLVENQAPFMVDLYPYYAYQNSRSNVSLNYALFSP 339
++ + + L AP + ++YPY+AY+++ ++SLNYA F P
Sbjct: 14 YMTDVARLLASTGAPLLANVYPYFAYRDNPGSISLNYATFQP 139
>gb|AY239039.1| Hordeum vulgare subsp. vulgare clone SMEm0025e22 glucan
endo-1,3-beta-D-glucosidase mRNA, partial cds
Length = 1074
Score = 66.3 bits (139), Expect(5) = 9e-028
Identities = 25/69 (36%), Positives = 41/69 (59%)
Frame = +1 / +2
Query: 283 YAYQNSRSNVSLNYALFSPESQDVIDPNTGLVYTNMFDAQVDSIFFALMALNFKTLKIMI 462
Y + ++ L++ALF V D GL YTN+FDA VD+++ A+ + + I++
Sbjct: 512 YFAKRDTPSIDLSFALFQQSPNPVHDDGNGLTYTNLFDAMVDALYTAMEKADASDVPIVV 691
Query: 463 TESGWPNKG 489
+ESGWP+ G
Sbjct: 692 SESGWPSAG 718
Score = 44.4 bits (91), Expect(5) = 9e-028
Identities = 15/26 (57%), Positives = 23/26 (88%)
Frame = +1 / +2
Query: 598 IDVYIFSLFNENRKPGIESERNWGLF 675
++ YIF++FNEN+K G ++ERN+GLF
Sbjct: 809 LETYIFAMFNENQKEGPDTERNFGLF 886
Score = 30.7 bits (61), Expect(5) = 9e-028
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = +1 / +2
Query: 508 ATPDNAQTYNTNLIRHV 558
AT NAQTYN NLI HV
Sbjct: 728 ATLTNAQTYNQNLIDHV 778
Score = 27.5 bits (54), Expect(5) = 9e-028
Identities = 9/31 (29%), Positives = 19/31 (61%)
Frame = +1 / +2
Query: 214 FLKPMLQFLVENQAPFMVDLYPYYAYQNSRS 306
++ + Q L AP + ++YPY+A +++ S
Sbjct: 446 YMTEVTQLLKSTGAPLLANVYPYFAKRDTPS 538
Score = 26.2 bits (51), Expect(5) = 9e-028
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = +1 / +2
Query: 67 VVPAMRNVHTALKKAGL 117
+VPA+ N++ AL KAG+
Sbjct: 311 IVPAINNLNNALAKAGI 361
>gb|AY239038.1| Hordeum vulgare subsp. vulgare clone CEa0006o08 glucan
endo-1,3-beta-D-glucosidase mRNA, complete cds
Length = 1287
Score = 65.8 bits (138), Expect(5) = 1e-027
Identities = 25/69 (36%), Positives = 41/69 (59%)
Frame = +1 / +2
Query: 283 YAYQNSRSNVSLNYALFSPESQDVIDPNTGLVYTNMFDAQVDSIFFALMALNFKTLKIMI 462
Y + ++ L++ALF V D GL YTN+FDA VD+++ A+ + + I++
Sbjct: 674 YFAKRDTPSIDLSFALFQQSPNPVHDDGNGLTYTNLFDAMVDALYTAMEKADAPDVPIVV 853
Query: 463 TESGWPNKG 489
+ESGWP+ G
Sbjct: 854 SESGWPSAG 880
Score = 44.9 bits (92), Expect(5) = 1e-027
Identities = 15/26 (57%), Positives = 23/26 (88%)
Frame = +1 / +2
Query: 598 IDVYIFSLFNENRKPGIESERNWGLF 675
++ YIF++FNEN+K G ++ERN+GLF
Sbjct: 971 LETYIFAMFNENKKEGPDTERNFGLF 1048
Score = 30.7 bits (61), Expect(5) = 1e-027
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = +1 / +2
Query: 508 ATPDNAQTYNTNLIRHV 558
AT NAQTYN NLI HV
Sbjct: 890 ATLTNAQTYNQNLIDHV 940
Score = 27.1 bits (53), Expect(5) = 1e-027
Identities = 9/31 (29%), Positives = 19/31 (61%)
Frame = +1 / +2
Query: 214 FLKPMLQFLVENQAPFMVDLYPYYAYQNSRS 306
++ + Q L AP + ++YPY+A +++ S
Sbjct: 608 YMTEVTQLLKATGAPLLANVYPYFAKRDTPS 700
Score = 26.2 bits (51), Expect(5) = 1e-027
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = +1 / +2
Query: 67 VVPAMRNVHTALKKAGL 117
+VPA+ N++ AL KAG+
Sbjct: 473 IVPAINNLNNALAKAGI 523
>gb|AL510583.1|AL510583 AL510583 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY05G08u 3',
mRNA sequence
Length = 658
Score = 68.1 bits (143), Expect(3) = 2e-027
Identities = 28/71 (39%), Positives = 41/71 (57%)
Frame = +1 / -2
Query: 292 QNSRSNVSLNYALFSPESQDVIDPNTGLVYTNMFDAQVDSIFFALMALNFKTLKIMITES 471
Q R SL YA F P + V D G VYTN+FDA VD+++ AL ++++++E+
Sbjct: 555 QQPRGTSSLXYATFQPGATAVRDAGNGHVYTNLFDAMVDAMYAALEKAGAPGVRVVVSET 376
Query: 472 GWPNKGAVKET 504
GWP+ G T
Sbjct: 375 GWPSAGGFAAT 343
Score = 62.6 bits (131), Expect(3) = 2e-027
Identities = 21/36 (58%), Positives = 31/36 (86%)
Frame = +1 / -2
Query: 598 IDVYIFSLFNENRKPGIESERNWGLFFPDKSSIYSL 705
I+ Y+F++FNEN KPG E+ERN+GLF+P+KS +Y +
Sbjct: 267 IEAYVFAMFNENMKPGDETERNFGLFYPNKSPVYPM 160
Score = 29.4 bits (58), Expect(3) = 2e-027
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +1 / -2
Query: 508 ATPDNAQTYNTNLIRHVVNDSGTPAKPGE 594
ATP+NA+ YN +I HV + P E
Sbjct: 348 ATPENARAYNQGMIDHVARGTPNRPGPIE 262
>gb|BG416675.1|BG416675 HVSMEk0014B06f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0014B06f, mRNA sequence
Length = 695
Score = 119 bits (255), Expect(2) = 4e-027
Identities = 48/118 (40%), Positives = 73/118 (61%)
Frame = +1 / +2
Query: 352 VIDPNTGLVYTNMFDAQVDSIFFALMALNFKTLKIMITESGWPNKGAVKETGATPDNAQT 531
+ DP T L YT+MFDAQ+D+I+ A+ L + + I + E+GWP + + G A+
Sbjct: 74 IYDPATKLNYTSMFDAQMDAIYTAMKKLGYGDVDIAVGEAGWPTQAEPGQIGVGVQEARD 253
Query: 532 YNTNLIRHVVNDSGTPAKPGEEIDVYIFSLFNENRKPGIESERNWGLFFPDKSSIYSL 705
+N +IR + GTP P + Y+FSLF+EN+KPG +ER++GLF PD + +Y L
Sbjct: 254 FNEGMIRVCSSGKGTPLMPNRTFETYLFSLFDENQKPGPIAERHFGLFNPDFTPVYDL 427
Score = 22.1 bits (42), Expect(2) = 4e-027
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +1 / +2
Query: 313 SLNYALFSPES 345
+LNYALF P S
Sbjct: 38 TLNYALFRPNS 70
>gb|BQ766726.1|BQ766726 EBro08_SQ006_O23_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ006_O23 5', mRNA sequence
Length = 599
Score = 63.6 bits (133), Expect(3) = 9e-027
Identities = 23/34 (67%), Positives = 29/34 (85%)
Frame = +1 / +3
Query: 598 IDVYIFSLFNENRKPGIESERNWGLFFPDKSSIY 699
I+ YIF++FNENRKPG E ERN+GLFFP+K +Y
Sbjct: 390 IETYIFAMFNENRKPGDEVERNFGLFFPNKQPVY 491
Score = 55.8 bits (116), Expect(3) = 9e-027
Identities = 21/46 (45%), Positives = 31/46 (67%)
Frame = +1 / +3
Query: 352 VIDPNTGLVYTNMFDAQVDSIFFALMALNFKTLKIMITESGWPNKG 489
V D GL YT++FDA VDSI+ AL ++++++ESGWP+ G
Sbjct: 162 VRDNGNGLTYTSLFDAMVDSIYAALEKAGTPNVRVVVSESGWPSAG 299
Score = 38.5 bits (78), Expect(3) = 9e-027
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = +1 / +3
Query: 217 LKPMLQFLVENQAPFMVDLYPYYAYQNSR 303
L P+ +FL APF+ ++YPY+AY++ R
Sbjct: 27 LVPIARFLDSTGAPFLANVYPYFAYRDDR 113
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.316 0.132 0.390
Matrix: BLOSUM62
Number of Hits to DB: 397,027,597
Number of Sequences: 312970
Number of extensions: 7116345
Number of successful extensions: 123992
Number of sequences better than 1.0e-020: 96
length of database: 58,378,179
effective HSP length: 53
effective length of database: 41,790,769
effective search space used: 8692479952
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.6 bits)