TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3561840.2.1
(1168 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BU979019.1|BU979019 HA14O21r HA Hordeum vulgare subsp. v... 362 2e-099
gb|CA021258.1|CA021258 HZ39J06r HZ Hordeum vulgare subsp. v... 359 1e-098
gb|BQ458971.1|BQ458971 HA02K21r HA Hordeum vulgare subsp. v... 347 1e-094
gb|BU979487.1|BU979487 HA16F04r HA Hordeum vulgare subsp. v... 347 1e-094
gb|CA025113.1|CA025113 HZ51D24r HZ Hordeum vulgare subsp. v... 277 7e-074
gb|AF486649.1| Hordeum vulgare subsp. vulgare AGAMOUS-like ... 166 5e-073
gb|AL509053.1|AL509053 AL509053 Hordeum vulgare Barke devel... 167 5e-073
gb|BQ764786.1|BQ764786 EBca01_SQ004_L21_R carpel, pre-anthe... 167 1e-072
gb|BG414586.2|BG414586 HVSMEk0002P16f Hordeum vulgare testa... 167 2e-072
gb|BE454695.2|BE454695 HVSMEh0095C18f Hordeum vulgare 5-45 ... 167 4e-072
gb|BU996265.1|BU996265 HM13B01r HM Hordeum vulgare subsp. v... 167 1e-070
gb|BG367358.1|BG367358 HVSMEi0011P20f Hordeum vulgare 20 DA... 167 2e-070
gb|CA024629.1|CA024629 HZ49N15r HZ Hordeum vulgare subsp. v... 167 8e-069
gb|AF486648.1| Hordeum vulgare subsp. vulgare AGAMOUS-like ... 168 3e-068
gb|AL506480.1|AL506480 AL506480 Hordeum vulgare Barke devel... 167 5e-067
gb|BU975486.1|BU975486 HB31F02r BC Hordeum vulgare subsp. v... 146 3e-066
gb|CA025584.1|CA025584 HZ52J05r HZ Hordeum vulgare subsp. v... 167 1e-064
gb|CA025405.1|CA025405 HZ52B05r HZ Hordeum vulgare subsp. v... 167 1e-064
gb|CA025534.1|CA025534 HZ52G24r HZ Hordeum vulgare subsp. v... 167 1e-064
gb|BI948755.1|BI948755 HVSMEl0010L12f Hordeum vulgare spike... 164 8e-064
gb|CA026169.1|CA026169 HZ55C06r HZ Hordeum vulgare subsp. v... 135 1e-063
gb|BI948062.1|BI948062 HVSMEl0008A23f Hordeum vulgare spike... 155 3e-063
gb|BE454527.3|BE454527 HVSMEh0094C05f Hordeum vulgare 5-45 ... 167 5e-063
gb|BU995356.1|BU995356 HM09P23r HM Hordeum vulgare subsp. v... 168 9e-063
gb|BU973813.1|BU973813 HB26A20r BC Hordeum vulgare subsp. v... 167 7e-061
gb|AL506894.1|AL506894 AL506894 Hordeum vulgare Barke devel... 167 1e-060
gb|AL508019.1|AL508019 AL508019 Hordeum vulgare Barke devel... 167 3e-060
gb|AL507763.1|AL507763 AL507763 Hordeum vulgare Barke devel... 167 3e-058
gb|BQ462735.1|BQ462735 HI01N16T HI Hordeum vulgare subsp. v... 167 1e-056
gb|CA028663.1|CA028663 HZ62N08r HZ Hordeum vulgare subsp. v... 167 1e-056
gb|BF258470.2|BF258470 HVSMEf0015M23f Hordeum vulgare seedl... 143 5e-056
gb|BG344090.1|BG344090 HVSMEg0007K02f Hordeum vulgare pre-a... 154 5e-056
gb|BG417142.1|BG417142 HVSMEk0016H10f Hordeum vulgare testa... 155 6e-053
gb|BU979781.1|BU979781 HA17E15r HA Hordeum vulgare subsp. v... 129 1e-052
gb|BU995744.1|BU995744 HM11D17r HM Hordeum vulgare subsp. v... 168 6e-052
gb|BU998535.1|BU998535 HI11F23r HI Hordeum vulgare subsp. v... 168 6e-052
gb|CA028005.1|CA028005 HZ60L09r HZ Hordeum vulgare subsp. v... 167 2e-049
gb|AY541067.1| Hordeum vulgare subsp. vulgare AGAMOUS LIKE6... 133 2e-048
gb|AL506475.1|AL506475 AL506475 Hordeum vulgare Barke devel... 168 1e-046
gb|BU995877.1|BU995877 HM11K13r HM Hordeum vulgare subsp. v... 168 1e-046
gb|BG415259.2|BG415259 HVSMEk0005M04f Hordeum vulgare testa... 167 4e-044
gb|CK124663.1|CK124663 BES1824109o14 BES1824 Hordeum vulgar... 117 7e-044
gb|BU969355.1|BU969355 HB11E16r BC Hordeum vulgare subsp. v... 167 1e-043
gb|BE193581.2|BE193581 HVSMEh0081M10f Hordeum vulgare 5-45 ... 121 2e-043
gb|BE195464.3|BE195464 HVSMEh0089L24f Hordeum vulgare 5-45 ... 167 3e-043
emb|AJ249145.1|HVU249145 Hordeum vulgare mRNA for MADS-box ... 116 2e-042
gb|BE456120.2|BE456120 HVSMEg0019N18f Hordeum vulgare pre-a... 116 2e-042
gb|BU984647.1|BU984647 HF04I23r HF Hordeum vulgare subsp. v... 109 2e-041
emb|AJ249146.1|HVU249146 Hordeum vulgare mRNA for MADS-box ... 113 3e-041
gb|BU982429.1|BU982429 HA26I11r HA Hordeum vulgare subsp. v... 167 6e-041
gb|BI957545.1|BI957545 HVSMEn0010B09f Hordeum vulgare rachi... 111 1e-040
gb|CA023749.1|CA023749 HZ47E18r HZ Hordeum vulgare subsp. v... 108 2e-040
gb|BM442374.2|BM442374 EBan01_SQ003_A06_R anther, yellow st... 165 6e-040
gb|CK125853.1|CK125853 BES1824111A1d09 BES1824 Hordeum vulg... 150 6e-040
gb|BG417111.1|BG417111 HVSMEk0016F04f Hordeum vulgare testa... 163 1e-039
gb|AY758235.1| Hordeum vulgare subsp. vulgare cultivar Igri... 107 2e-039
gb|AY785825.1| Hordeum vulgare subsp. vulgare cultivar More... 107 2e-039
gb|AY758236.1| Hordeum vulgare subsp. vulgare cultivar Triu... 107 2e-039
gb|AY785826.1| Hordeum vulgare subsp. vulgare cultivar More... 107 2e-039
gb|AY785829.1| Hordeum vulgare subsp. vulgare cultivar Harr... 107 2e-039
gb|AY785827.1| Hordeum vulgare subsp. vulgare cultivar 88Ab... 107 2e-039
gb|AY785828.1| Hordeum vulgare subsp. vulgare cultivar Dick... 107 2e-039
gb|AY785830.1| Hordeum vulgare subsp. vulgare cultivar Stri... 107 2e-039
gb|AY785831.1| Hordeum vulgare subsp. vulgare cultivar Trem... 107 2e-039
gb|AY785833.1| Hordeum vulgare subsp. vulgare cultivar Igri... 107 2e-039
gb|AY785834.1| Hordeum vulgare subsp. vulgare cultivar Nure... 107 2e-039
gb|AY785835.1| Hordeum vulgare subsp. vulgare cultivar Komp... 107 2e-039
gb|AY866486.1| Hordeum vulgare subsp. vulgare cultivar Triu... 107 2e-039
gb|BJ547898.1|BJ547898 BJ547898 K. Sato unpublished cDNA li... 107 2e-039
gb|CA029142.1|CA029142 HZ64F07r HZ Hordeum vulgare subsp. v... 161 5e-039
gb|BI958544.1|BI958544 HVSMEn0015I07f Hordeum vulgare rachi... 107 6e-039
gb|BU997618.1|BU997618 HI08I05r HI Hordeum vulgare subsp. v... 107 6e-039
gb|BJ547335.1|BJ547335 BJ547335 K. Sato unpublished cDNA li... 107 1e-038
gb|BJ547783.1|BJ547783 BJ547783 K. Sato unpublished cDNA li... 107 1e-038
gb|BU999147.1|BU999147 HI13G17r HI Hordeum vulgare subsp. v... 107 1e-038
gb|BJ547578.1|BJ547578 BJ547578 K. Sato unpublished cDNA li... 107 1e-038
gb|BJ547620.1|BJ547620 BJ547620 K. Sato unpublished cDNA li... 107 1e-038
gb|BU994410.1|BU994410 HM06P17r HM Hordeum vulgare subsp. v... 107 1e-038
gb|BJ547327.1|BJ547327 BJ547327 K. Sato unpublished cDNA li... 107 2e-038
gb|BU999601.1|BU999601 HI15A03r HI Hordeum vulgare subsp. v... 107 4e-038
gb|CA032046.1|CA032046 HX11N16r HX Hordeum vulgare subsp. v... 107 4e-038
emb|AJ249144.1|HVU249144 Hordeum vulgare mRNA for MADS-box ... 99 9e-037
gb|BF622888.3|BF622888 HVSMEa0009O05f Hordeum vulgare seedl... 107 2e-036
emb|AJ249143.1|HVU249143 Hordeum vulgare mRNA for MADS-box ... 108 8e-036
gb|BU981579.1|BU981579 HA24A15r HA Hordeum vulgare subsp. v... 91 8e-036
gb|AV933011.1|AV933011 AV933011 K. Sato unpublished cDNA li... 107 1e-035
gb|CA021403.1|CA021403 HZ39P24r HZ Hordeum vulgare subsp. v... 107 2e-035
gb|BQ462520.1|BQ462520 HI01C12T HI Hordeum vulgare subsp. v... 107 2e-035
gb|AV932867.1|AV932867 AV932867 K. Sato unpublished cDNA li... 107 2e-035
gb|BM376225.2|BM376225 EBma01_SQ002_L14_R maternal, 4 DPA, ... 107 2e-035
gb|BQ764751.1|BQ764751 EBca01_SQ004_E21_R carpel, pre-anthe... 106 3e-035
gb|BJ547364.1|BJ547364 BJ547364 K. Sato unpublished cDNA li... 107 3e-035
gb|BJ547239.1|BJ547239 BJ547239 K. Sato unpublished cDNA li... 107 3e-035
gb|BQ660301.1|BQ660301 HI01N16w HI Hordeum vulgare subsp. v... 129 7e-035
gb|BG418254.2|BG418254 HVSMEk0022B16f Hordeum vulgare testa... 107 2e-034
gb|CA025109.1|CA025109 HZ51D19r HZ Hordeum vulgare subsp. v... 107 3e-034
gb|BU979626.1|BU979626 HA16M02r HA Hordeum vulgare subsp. v... 106 5e-034
gb|BM097203.2|BM097203 EBpi07_SQ002_L16_R pistil, 12 DPA, n... 143 2e-033
gb|BE231150.2|BE231150 HVSMEg0017C04f Hordeum vulgare pre-a... 107 2e-033
gb|BJ547238.1|BJ547238 BJ547238 K. Sato unpublished cDNA li... 98 1e-032
gb|BJ547546.1|BJ547546 BJ547546 K. Sato unpublished cDNA li... 98 1e-032
gb|BJ547385.1|BJ547385 BJ547385 K. Sato unpublished cDNA li... 107 1e-032
gb|BU996011.1|BU996011 HM12B18r HM Hordeum vulgare subsp. v... 102 7e-032
gb|BM374839.1|BM374839 EBma05_SQ003_C14_R maternal, 12 DPA,... 107 2e-031
gb|BU981513.1|BU981513 HA23N18r HA Hordeum vulgare subsp. v... 106 2e-031
gb|AV934186.1|AV934186 AV934186 K. Sato unpublished cDNA li... 107 5e-031
gb|CA031703.1|CA031703 HX10O06r HX Hordeum vulgare subsp. v... 78 1e-030
gb|BG418830.2|BG418830 HVSMEk0024K11f Hordeum vulgare testa... 100 1e-029
gb|AV922660.2|AV922660 AV922660 K. Sato unpublished cDNA li... 98 2e-029
gb|AY758233.1| Hordeum vulgare subsp. vulgare cultivar More... 107 2e-029
gb|AY750995.1| Hordeum vulgare subsp. vulgare cultivar More... 107 2e-029
gb|BJ547237.1|BJ547237 BJ547237 K. Sato unpublished cDNA li... 85 7e-029
gb|AL508733.1|AL508733 AL508733 Hordeum vulgare Barke devel... 127 8e-029
gb|BG418810.1|BG418810 HVSMEk0024I17f Hordeum vulgare testa... 127 8e-029
gb|BU981382.1|BU981382 HA23H05r HA Hordeum vulgare subsp. v... 127 8e-029
gb|BU996042.1|BU996042 HM12D17r HM Hordeum vulgare subsp. v... 127 8e-029
gb|BU997970.1|BU997970 HI09J04r HI Hordeum vulgare subsp. v... 127 8e-029
gb|BU999207.1|BU999207 HI13L03r HI Hordeum vulgare subsp. v... 127 8e-029
gb|CA021239.1|CA021239 HZ39I09r HZ Hordeum vulgare subsp. v... 127 8e-029
gb|CA022102.1|CA022102 HZ42C18r HZ Hordeum vulgare subsp. v... 127 8e-029
gb|CA024361.1|CA024361 HZ49B13r HZ Hordeum vulgare subsp. v... 127 8e-029
gb|CA025884.1|CA025884 HZ53G19r HZ Hordeum vulgare subsp. v... 127 8e-029
gb|AY541068.1| Hordeum vulgare subsp. vulgare AGAMOUS LIKE9... 127 8e-029
emb|AJ249147.1|HVU249147 Hordeum vulgare mRNA for MADS-box ... 127 8e-029
gb|BI776462.2|BI776462 EBpi05_SQ001_H07_R pistil, 8 DPA, no... 127 1e-028
gb|BQ758398.1|BQ758398 EBma05_SQ001_L12_R maternal, 12 DPA,... 125 6e-028
gb|CA023726.1|CA023726 HZ47D14r HZ Hordeum vulgare subsp. v... 109 7e-028
gb|BU996044.1|BU996044 HM12D19r HM Hordeum vulgare subsp. v... 105 1e-026
gb|BF627446.2|BF627446 HVSMEb0004O03f Hordeum vulgare seedl... 117 9e-026
gb|BG367455.1|BG367455 HVSMEi0012F04f Hordeum vulgare 20 DA... 117 9e-026
gb|BU978508.1|BU978508 HA13H01r HA Hordeum vulgare subsp. v... 117 1e-025
gb|BU979387.1|BU979387 HA15P22r HA Hordeum vulgare subsp. v... 117 1e-025
gb|BU997161.1|BU997161 HI07B21r HI Hordeum vulgare subsp. v... 117 1e-025
gb|CA022702.1|CA022702 HZ44B21r HZ Hordeum vulgare subsp. v... 117 1e-025
gb|CA023382.1|CA023382 HZ46B02r HZ Hordeum vulgare subsp. v... 117 1e-025
gb|CA024068.1|CA024068 HZ48E09r HZ Hordeum vulgare subsp. v... 117 1e-025
gb|CA024560.1|CA024560 HZ49K11r HZ Hordeum vulgare subsp. v... 117 1e-025
gb|CA027865.1|CA027865 HZ60E08r HZ Hordeum vulgare subsp. v... 117 1e-025
gb|CA023514.1|CA023514 HZ46H17r HZ Hordeum vulgare subsp. v... 116 3e-025
gb|BU975559.1|BU975559 HB31I14r BC Hordeum vulgare subsp. v... 112 3e-024
gb|BG414778.2|BG414778 HVSMEk0003L01f Hordeum vulgare testa... 106 3e-024
gb|BG414398.1|BG414398 HVSMEk0002B05f Hordeum vulgare testa... 112 4e-024
gb|CA021814.1|CA021814 HZ41D07r HZ Hordeum vulgare subsp. v... 112 4e-024
gb|BE455888.2|BE455888 HVSMEg0017B20f Hordeum vulgare pre-a... 100 4e-024
gb|BI956235.1|BI956235 HVSMEn0001F21f Hordeum vulgare rachi... 111 6e-024
gb|BM373901.1|BM373901 EBma03_SQ003_B04_R maternal, 8 DPA, ... 111 6e-024
gb|BQ470743.1|BQ470743 HX03O10r HX Hordeum vulgare subsp. v... 111 6e-024
gb|AY541066.1| Hordeum vulgare subsp. vulgare PISTILLATA-li... 100 6e-024
gb|BG310152.1|BG310152 HVSMEc0016P20f Hordeum vulgare seedl... 100 6e-024
gb|CK125530.1|CK125530 BES1824108p02 BES1824 Hordeum vulgar... 100 6e-024
gb|CA022292.1|CA022292 HZ42L06r HZ Hordeum vulgare subsp. v... 100 6e-024
gb|BG365393.2|BG365393 HVSMEi0002I08f Hordeum vulgare 20 DA... 111 1e-023
gb|CA022365.1|CA022365 HZ42O13r HZ Hordeum vulgare subsp. v... 110 1e-023
gb|BG344343.1|BG344343 HVSMEg0008P19f Hordeum vulgare pre-a... 100 4e-023
gb|CK122890.1|CK122890 BES1824101b13 BES1824 Hordeum vulgar... 108 5e-023
gb|BG343946.2|BG343946 HVSMEg0007D05f Hordeum vulgare pre-a... 107 1e-022
gb|BG414969.2|BG414969 HVSMEk0004I01f Hordeum vulgare testa... 107 1e-022
gb|BQ463844.1|BQ463844 HG01J20r HG Hordeum vulgare subsp. v... 107 1e-022
gb|CA025481.1|CA025481 HZ52E16r HZ Hordeum vulgare subsp. v... 107 1e-022
gb|BE194007.3|BE194007 HVSMEh0083F13f Hordeum vulgare 5-45 ... 107 1e-022
gb|BF624256.3|BF624256 HVSMEa0013C13f Hordeum vulgare seedl... 106 2e-022
gb|BI957577.1|BI957577 HVSMEn0010D09f Hordeum vulgare rachi... 106 2e-022
gb|BF266152.2|BF266152 HV_CEa0014F03f Hordeum vulgare seedl... 106 2e-022
gb|BU994511.1|BU994511 HM07E21r HM Hordeum vulgare subsp. v... 106 2e-022
gb|BG301340.1|BG301340 HVSMEb0020P03f Hordeum vulgare seedl... 105 5e-022
gb|BM096825.2|BM096825 EBma07_SQ001_M14_R maternal, 21 DPA,... 105 5e-022
gb|BM097091.2|BM097091 EBpi07_SQ002_F23_R pistil, 12 DPA, n... 105 5e-022
gb|BQ753907.1|BQ753907 EBca01_SQ002_D17_R carpel, pre-anthe... 103 2e-021
gb|CA009157.1|CA009157 HU13F11r HU Hordeum vulgare subsp. v... 101 3e-021
gb|CA009054.1|CA009054 HU13A17r HU Hordeum vulgare subsp. v... 101 3e-021
gb|BJ543924.1|BJ543924 BJ543924 K. Sato unpublished cDNA li... 73 4e-021
gb|BF629182.3|BF629182 HVSMEb0010D12f Hordeum vulgare seedl... 101 6e-021
gb|BE194950.3|BE194950 HVSMEh0087M04f Hordeum vulgare 5-45 ... 101 6e-021
gb|BQ459169.1|BQ459169 HA02B21r HA Hordeum vulgare subsp. v... 101 6e-021
gb|BM442365.2|BM442365 EBan01_SQ002_P21_R anther, yellow st... 101 6e-021
gb|BU973061.1|BU973061 HB23K04r BC Hordeum vulgare subsp. v... 101 6e-021
gb|CK123208.1|CK123208 BES1824102i20 BES1824 Hordeum vulgar... 101 6e-021
>gb|BU979019.1|BU979019 HA14O21r HA Hordeum vulgare subsp. vulgare cDNA clone HA14O21
5-PRIME, mRNA sequence
Length = 633
Score = 362 bits (785), Expect = 2e-099
Identities = 154/181 (85%), Positives = 171/181 (94%)
Frame = +2 / +2
Query: 92 EISSMGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYE 271
E + MGRGRIEIKRIEN TSRQVTFCKRRNGLLKKAYELSVLCDAEVAL+VFSSRGRLYE
Sbjct: 59 EAAEMGRGRIEIKRIENTTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYE 238
Query: 272 YANNSVKATIERYKKAHAVGSSSGPPLLEHNAQQFYQQESAKLRNQIQMLQNTNRHLVGD 451
Y+NNSVKATIERYKKAHA GS+SG PL+E NAQQ+YQQE+AK+R+QIQMLQNTN+HLVGD
Sbjct: 239 YSNNSVKATIERYKKAHACGSTSGAPLIEVNAQQYYQQETAKMRHQIQMLQNTNKHLVGD 418
Query: 452 SVGNLSLKELKQLESRLEKGISKIRARKSELLAAEINYMAKRETELQNDHMNLRTKIEEG 631
SVGNLSLKELKQLESRLEKGI+KIRARK+ELL+ EINYM KRE ELQ+D+++LRTKI EG
Sbjct: 419 SVGNLSLKELKQLESRLEKGIAKIRARKNELLSCEINYMVKREIELQSDNIDLRTKIAEG 598
Query: 632 E 634
E
Sbjct: 599 E 601
Score = 196 bits (423), Expect = 2e-049
Identities = 88/121 (72%), Positives = 90/121 (74%)
Frame = -2 / -1
Query: 513 MPXXXXXXXXXXXXSDKFPTESPTKCLLVFCSIWIWLRSFADSCW*NCWALCSKSGGPEE 334
MP SD+FPTESPTKCLLVFCSIWIW R FA SCW* C AL S G PE
Sbjct: 480 MPFSRRLSSCFSSLSDRFPTESPTKCLLVFCSIWIWWRIFAVSCW*YC*ALTSMRGAPEV 301
Query: 333 EPTACAFLYLSIVAFTLLLAYS*RRPRLEKTTSATSASQRTESSYAFLRSPLRRLQKVTC 154
EP ACAFLYLSIVA TLLL YS*RRPRLEKT SATSAS RTESS AF +SP RRLQKVT
Sbjct: 300 EPQACAFLYLSIVALTLLLEYS*RRPRLEKTMSATSASHRTESS*AFFKSPFRRLQKVTW 121
Query: 153 R 151
R
Sbjct: 120 R 118
Score = 171 bits (369), Expect(3) = 3e-053
Identities = 79/114 (69%), Positives = 86/114 (75%)
Frame = +1 / +1
Query: 262 PLRVRQQQCEGYDREVQEGTRRWLFLWPPTLRAQCPAILPARIRKTAQPDPDAAKH*QAL 441
PL V QQQC+GY+ EVQEGT WL LW + R+QC AILPAR K A PDPDAAKH*QAL
Sbjct: 229 PL*VLQQQCQGYN*EVQEGTCLWLNLWGTSHRSQCSAILPARNCKDAPPDPDAAKH*QAL 408
Query: 442 GW*LCGKLVTQRAEAAGEPP*ERHL*DQGQEE*AAGCRDQLHGQKGD*ASE*PH 603
GW* C + +TQ AEAA +PP ERH DQGQEE*A DQLHGQKGD ASE* H
Sbjct: 409 GW*FCWEPITQGAEAARKPPRERHCKDQGQEE*APIL*DQLHGQKGDRASE*QH 570
Score = 171 bits (368), Expect = 7e-042
Identities = 81/124 (65%), Positives = 91/124 (73%)
Frame = +3 / +3
Query: 291 RLRSRGTRRHTPLALPLAPHS*STMPSNSTSKNPQNCATRSRCCKTLTGTWLVTLWETCH 470
RL+ RGTRRH +A PL S* +M SN+TSK Q CATRSRCCKTLT TWLV L T H
Sbjct: 258 RLQLRGTRRHMLVAQPLGHLS*KSMLSNTTSKKLQRCATRSRCCKTLTSTWLVILLGTYH 437
Query: 471 SKS*SSWRAALRKASLRSGPGRVSCWLPRSITWPKGRLSFRMTT*TSGPRLRRESNSCSR 650
S+S*SS +AA RKA RSGPGR+S +L RS TW KGR SFR+TT S PRLRR S+SC R
Sbjct: 438 SRS*SSSKAASRKALQRSGPGRMSSYLVRSTTWSKGR*SFRVTTLISEPRLRRGSSSCRR 617
Query: 651 *LWP 662
L P
Sbjct: 618 SLSP 629
Score = 170 bits (365), Expect = 2e-041
Identities = 79/124 (63%), Positives = 88/124 (70%)
Frame = -3 / -2
Query: 650 PAAAVALPPQSWS*GSCGHSEAQSPFWPCN*SRQPAAHSSWP*S*RCLSQGGSPAASAL* 471
P+A A PPQSW * C HSEA SPF PC+*S + AHSSWP*S +CLS+GG AASA *
Sbjct: 617 PSATAAPPPQSWF*DQCCHSEALSPF*PCS*SHKIGAHSSWP*SLQCLSRGGFRAASAP* 438
Query: 470 VTSFPQSHQPSAC*CFAASGSGCAVLRILAGRIAGHCALRVGGQRKSQRRVPSCTSRS*P 291
V Q+HQPSAC*CFAASGSG A L+ LAG IA H L QR S + VPSCTS+ *P
Sbjct: 437 VIGSQQNHQPSAC*CFAASGSGGASLQFLAGSIAEH*LL*EVPQRLSHKHVPSCTSQL*P 258
Query: 290 SHCC 279
HCC
Sbjct: 257 *HCC 246
Score = 139 bits (299), Expect(2) = 1e-052
Identities = 59/81 (72%), Positives = 69/81 (85%)
Frame = -1 / -3
Query: 340 RGRANGVCLLVPLDRSLHTVVGVLVEASAAGEDDERHLGVAEDGELVRLLEEPIAALAEG 161
RG A +CLLVPL+ SL TVVGVL+EA+AAG+DDERHLGVA+DGELV LL+EP+ ALAEG
Sbjct: 307 RG*ATSMCLLVPLNCSLDTVVGVLIEAAAAGKDDERHLGVAQDGELVGLLQEPVPALAEG 128
Query: 160 DLPARVVLDPLDLNPSPPHAG 98
L A +L+PLDLNPSPPH G
Sbjct: 127 HLAASGILNPLDLNPSPPHLG 65
Score = 87.7 bits (185), Expect(2) = 1e-052
Identities = 41/75 (54%), Positives = 48/75 (64%)
Frame = -1 / -3
Query: 610 EVHVVILKLSLPFGHVIDLGSQQLTLPGPDLRDXXXXXXXXXXXXFE*QVSHRVTNQVPV 431
E++VV LKL LPF HV+DL +L LPGPDL + E* V +R+TNQV V
Sbjct: 577 EINVVTLKLYLPFDHVVDLTR*ELILPGPDLCNAFLEAAFELLQLLE**VPNRITNQVLV 398
Query: 430 SVLQHLDLVAQFCGF 386
SVLQHLDLVA C F
Sbjct: 397 SVLQHLDLVAHLCSF 353
Score = 50.6 bits (104), Expect(3) = 3e-053
Identities = 22/32 (68%), Positives = 25/32 (78%)
Frame = +1 / +1
Query: 106 GEGKD*DQEDREQHEPAGHLLQAPQWAPQEGV 201
GEGKD*DQED E H P G LLQAP+ A +EG+
Sbjct: 73 GEGKD*DQED*EYH*PPGDLLQAPERALEEGL 168
Score = 25.8 bits (50), Expect(3) = 3e-053
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +3 / +3
Query: 72 LLERNKLRSPAWGGEGL 122
L N + P WGGEGL
Sbjct: 39 LARANTKKRPRWGGEGL 89
>gb|CA021258.1|CA021258 HZ39J06r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ39J06
5-PRIME, mRNA sequence
Length = 607
Score = 359 bits (779), Expect = 1e-098
Identities = 153/181 (84%), Positives = 170/181 (93%)
Frame = +2 / +2
Query: 92 EISSMGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYE 271
E + MGRGRIEIKRIEN TSRQVTFCKRRNGLLKKAYEL VLCDAEVAL+VFSSRGRLYE
Sbjct: 56 EAAEMGRGRIEIKRIENTTSRQVTFCKRRNGLLKKAYELYVLCDAEVALIVFSSRGRLYE 235
Query: 272 YANNSVKATIERYKKAHAVGSSSGPPLLEHNAQQFYQQESAKLRNQIQMLQNTNRHLVGD 451
Y+NNSVKATIERYKKAHA GS+SG PL+E NAQQ+YQQE+AK+R+QIQMLQNTN+HLVGD
Sbjct: 236 YSNNSVKATIERYKKAHACGSTSGAPLIEVNAQQYYQQETAKMRHQIQMLQNTNKHLVGD 415
Query: 452 SVGNLSLKELKQLESRLEKGISKIRARKSELLAAEINYMAKRETELQNDHMNLRTKIEEG 631
SVGNLSLKELKQLESRLEKGI+KIRARK+ELL+ EINYM KRE ELQ+D+++LRTKI EG
Sbjct: 416 SVGNLSLKELKQLESRLEKGIAKIRARKNELLSCEINYMVKREIELQSDNIDLRTKIAEG 595
Query: 632 E 634
E
Sbjct: 596 E 598
Score = 192 bits (414), Expect = 3e-048
Identities = 87/121 (71%), Positives = 89/121 (73%)
Frame = -2 / -2
Query: 513 MPXXXXXXXXXXXXSDKFPTESPTKCLLVFCSIWIWLRSFADSCW*NCWALCSKSGGPEE 334
MP SD+FPTESPTKCLLVFCSIWIW R FA SCW* C AL S G PE
Sbjct: 477 MPFSRRLSSCFSSLSDRFPTESPTKCLLVFCSIWIWWRIFAVSCW*YC*ALTSMRGAPEV 298
Query: 333 EPTACAFLYLSIVAFTLLLAYS*RRPRLEKTTSATSASQRTESSYAFLRSPLRRLQKVTC 154
EP ACAFLYLSIVA TLLL YS*RRPRLEKT SATSAS RT SS AF +SP RRLQKVT
Sbjct: 297 EPQACAFLYLSIVALTLLLEYS*RRPRLEKTMSATSASHRT*SS*AFFKSPFRRLQKVTW 118
Query: 153 R 151
R
Sbjct: 117 R 115
Score = 171 bits (369), Expect(3) = 3e-053
Identities = 79/114 (69%), Positives = 86/114 (75%)
Frame = +1 / +1
Query: 262 PLRVRQQQCEGYDREVQEGTRRWLFLWPPTLRAQCPAILPARIRKTAQPDPDAAKH*QAL 441
PL V QQQC+GY+ EVQEGT WL LW + R+QC AILPAR K A PDPDAAKH*QAL
Sbjct: 226 PL*VLQQQCQGYN*EVQEGTCLWLNLWGTSHRSQCSAILPARNCKDAPPDPDAAKH*QAL 405
Query: 442 GW*LCGKLVTQRAEAAGEPP*ERHL*DQGQEE*AAGCRDQLHGQKGD*ASE*PH 603
GW* C + +TQ AEAA +PP ERH DQGQEE*A DQLHGQKGD ASE* H
Sbjct: 406 GW*FCWEPITQGAEAARKPPRERHCKDQGQEE*APIL*DQLHGQKGDRASE*QH 567
Score = 164 bits (353), Expect = 8e-040
Identities = 77/119 (64%), Positives = 85/119 (71%)
Frame = -3 / -3
Query: 635 ALPPQSWS*GSCGHSEAQSPFWPCN*SRQPAAHSSWP*S*RCLSQGGSPAASAL*VTSFP 456
A PPQSW * C HSEA SPF PC+*S + AHSSWP*S +CLS+GG AASA *V
Sbjct: 599 APPPQSWF*DQCCHSEALSPF*PCS*SHKIGAHSSWP*SLQCLSRGGFRAASAP*VIGSQ 420
Query: 455 QSHQPSAC*CFAASGSGCAVLRILAGRIAGHCALRVGGQRKSQRRVPSCTSRS*PSHCC 279
Q+HQPSAC*CFAASGSG A L+ LAG IA H L QR S + VPSCTS+ *P HCC
Sbjct: 419 QNHQPSAC*CFAASGSGGASLQFLAGSIAEH*LL*EVPQRLSHKHVPSCTSQL*P*HCC 243
Score = 163 bits (351), Expect = 1e-039
Identities = 77/117 (65%), Positives = 87/117 (74%)
Frame = +3 / +3
Query: 291 RLRSRGTRRHTPLALPLAPHS*STMPSNSTSKNPQNCATRSRCCKTLTGTWLVTLWETCH 470
RL+ RGTRRH +A PL S* +M SN+TSK Q CATRSRCCKTLT TWLV L T H
Sbjct: 255 RLQLRGTRRHMLVAQPLGHLS*KSMLSNTTSKKLQRCATRSRCCKTLTSTWLVILLGTYH 434
Query: 471 SKS*SSWRAALRKASLRSGPGRVSCWLPRSITWPKGRLSFRMTT*TSGPRLRRESNS 641
S+S*SS +AA RKA RSGPGR+S +L RS TW KGR SFR+TT S PRLRR S+S
Sbjct: 435 SRS*SSSKAASRKALQRSGPGRMSSYLVRSTTWSKGR*SFRVTTLISEPRLRRGSSS 605
Score = 135 bits (290), Expect(2) = 2e-051
Identities = 58/81 (71%), Positives = 68/81 (83%)
Frame = -1 / -1
Query: 340 RGRANGVCLLVPLDRSLHTVVGVLVEASAAGEDDERHLGVAEDGELVRLLEEPIAALAEG 161
RG A +CLLVPL+ SL TVVGVL+EA+AAG+DDERHLGVA+D ELV LL+EP+ ALAEG
Sbjct: 304 RG*ATSMCLLVPLNCSLDTVVGVLIEAAAAGKDDERHLGVAQDVELVGLLQEPVPALAEG 125
Query: 160 DLPARVVLDPLDLNPSPPHAG 98
L A +L+PLDLNPSPPH G
Sbjct: 124 HLAASGILNPLDLNPSPPHLG 62
Score = 87.7 bits (185), Expect(2) = 2e-051
Identities = 41/75 (54%), Positives = 48/75 (64%)
Frame = -1 / -1
Query: 610 EVHVVILKLSLPFGHVIDLGSQQLTLPGPDLRDXXXXXXXXXXXXFE*QVSHRVTNQVPV 431
E++VV LKL LPF HV+DL +L LPGPDL + E* V +R+TNQV V
Sbjct: 574 EINVVTLKLYLPFDHVVDLTR*ELILPGPDLCNAFLEAAFELLQLLE**VPNRITNQVLV 395
Query: 430 SVLQHLDLVAQFCGF 386
SVLQHLDLVA C F
Sbjct: 394 SVLQHLDLVAHLCSF 350
Score = 50.6 bits (104), Expect(3) = 3e-053
Identities = 22/32 (68%), Positives = 25/32 (78%)
Frame = +1 / +1
Query: 106 GEGKD*DQEDREQHEPAGHLLQAPQWAPQEGV 201
GEGKD*DQED E H P G LLQAP+ A +EG+
Sbjct: 70 GEGKD*DQED*EYH*PPGDLLQAPERALEEGL 165
Score = 25.8 bits (50), Expect(3) = 3e-053
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +3 / +3
Query: 72 LLERNKLRSPAWGGEGL 122
L N + P WGGEGL
Sbjct: 36 LARANTKKRPRWGGEGL 86
>gb|BQ458971.1|BQ458971 HA02K21r HA Hordeum vulgare subsp. vulgare cDNA clone HA02K21
5-PRIME, mRNA sequence
Length = 606
Score = 347 bits (751), Expect = 1e-094
Identities = 147/173 (84%), Positives = 164/173 (94%)
Frame = +2 / +1
Query: 92 EISSMGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYE 271
E + MGRGRIEIKRIEN TSRQVTFCKRRNGLLKKAYELSVLCDAEVAL+VFSSRGRLYE
Sbjct: 88 EAAEMGRGRIEIKRIENTTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYE 267
Query: 272 YANNSVKATIERYKKAHAVGSSSGPPLLEHNAQQFYQQESAKLRNQIQMLQNTNRHLVGD 451
Y+NNSVKATIERYKKAHA GS+SG PL+E NAQQ+YQQE+AK+R+QIQMLQNTN+HLVGD
Sbjct: 268 YSNNSVKATIERYKKAHACGSTSGAPLIEVNAQQYYQQETAKMRHQIQMLQNTNKHLVGD 447
Query: 452 SVGNLSLKELKQLESRLEKGISKIRARKSELLAAEINYMAKRETELQNDHMNL 610
SVGNLSLKELKQLESRLEKGI+KIRARK+ELL+ EINYM KRE ELQ+D+++L
Sbjct: 448 SVGNLSLKELKQLESRLEKGIAKIRARKNELLSCEINYMVKREIELQSDNIDL 606
Score = 196 bits (423), Expect = 2e-049
Identities = 88/121 (72%), Positives = 90/121 (74%)
Frame = -2 / -2
Query: 513 MPXXXXXXXXXXXXSDKFPTESPTKCLLVFCSIWIWLRSFADSCW*NCWALCSKSGGPEE 334
MP SD+FPTESPTKCLLVFCSIWIW R FA SCW* C AL S G PE
Sbjct: 509 MPFSRRLSSCFSSLSDRFPTESPTKCLLVFCSIWIWWRIFAVSCW*YC*ALTSMRGAPEV 330
Query: 333 EPTACAFLYLSIVAFTLLLAYS*RRPRLEKTTSATSASQRTESSYAFLRSPLRRLQKVTC 154
EP ACAFLYLSIVA TLLL YS*RRPRLEKT SATSAS RTESS AF +SP RRLQKVT
Sbjct: 329 EPQACAFLYLSIVALTLLLEYS*RRPRLEKTMSATSASHRTESS*AFFKSPFRRLQKVTW 150
Query: 153 R 151
R
Sbjct: 149 R 147
Score = 171 bits (369), Expect(3) = 3e-053
Identities = 79/114 (69%), Positives = 86/114 (75%)
Frame = +1 / +3
Query: 262 PLRVRQQQCEGYDREVQEGTRRWLFLWPPTLRAQCPAILPARIRKTAQPDPDAAKH*QAL 441
PL V QQQC+GY+ EVQEGT WL LW + R+QC AILPAR K A PDPDAAKH*QAL
Sbjct: 258 PL*VLQQQCQGYN*EVQEGTCLWLNLWGTSHRSQCSAILPARNCKDAPPDPDAAKH*QAL 437
Query: 442 GW*LCGKLVTQRAEAAGEPP*ERHL*DQGQEE*AAGCRDQLHGQKGD*ASE*PH 603
GW* C + +TQ AEAA +PP ERH DQGQEE*A DQLHGQKGD ASE* H
Sbjct: 438 GW*FCWEPITQGAEAARKPPRERHCKDQGQEE*APIL*DQLHGQKGDRASE*QH 599
Score = 149 bits (321), Expect = 2e-035
Identities = 69/104 (66%), Positives = 78/104 (75%)
Frame = +3 / +2
Query: 291 RLRSRGTRRHTPLALPLAPHS*STMPSNSTSKNPQNCATRSRCCKTLTGTWLVTLWETCH 470
RL+ RGTRRH +A PL S* +M SN+TSK Q CATRSRCCKTLT TWLV L T H
Sbjct: 287 RLQLRGTRRHMLVAQPLGHLS*KSMLSNTTSKKLQRCATRSRCCKTLTSTWLVILLGTYH 466
Query: 471 SKS*SSWRAALRKASLRSGPGRVSCWLPRSITWPKGRLSFRMTT 602
S+S*SS +AA RKA RSGPGR+S +L RS TW KGR SFR+TT
Sbjct: 467 SRS*SSSKAASRKALQRSGPGRMSSYLVRSTTWSKGR*SFRVTT 598
Score = 149 bits (320), Expect = 3e-035
Identities = 70/108 (64%), Positives = 78/108 (72%)
Frame = -3 / -3
Query: 602 CGHSEAQSPFWPCN*SRQPAAHSSWP*S*RCLSQGGSPAASAL*VTSFPQSHQPSAC*CF 423
C HSEA SPF PC+*S + AHSSWP*S +CLS+GG AASA *V Q+HQPSAC*CF
Sbjct: 598 CCHSEALSPF*PCS*SHKIGAHSSWP*SLQCLSRGGFRAASAP*VIGSQQNHQPSAC*CF 419
Query: 422 AASGSGCAVLRILAGRIAGHCALRVGGQRKSQRRVPSCTSRS*PSHCC 279
AASGSG A L+ LAG IA H L QR S + VPSCTS+ *P HCC
Sbjct: 418 AASGSGGASLQFLAGSIAEH*LL*EVPQRLSHKHVPSCTSQL*P*HCC 275
Score = 139 bits (299), Expect(2) = 1e-052
Identities = 59/81 (72%), Positives = 69/81 (85%)
Frame = -1 / -1
Query: 340 RGRANGVCLLVPLDRSLHTVVGVLVEASAAGEDDERHLGVAEDGELVRLLEEPIAALAEG 161
RG A +CLLVPL+ SL TVVGVL+EA+AAG+DDERHLGVA+DGELV LL+EP+ ALAEG
Sbjct: 336 RG*ATSMCLLVPLNCSLDTVVGVLIEAAAAGKDDERHLGVAQDGELVGLLQEPVPALAEG 157
Query: 160 DLPARVVLDPLDLNPSPPHAG 98
L A +L+PLDLNPSPPH G
Sbjct: 156 HLAASGILNPLDLNPSPPHLG 94
Score = 87.7 bits (185), Expect(2) = 1e-052
Identities = 41/75 (54%), Positives = 48/75 (64%)
Frame = -1 / -1
Query: 610 EVHVVILKLSLPFGHVIDLGSQQLTLPGPDLRDXXXXXXXXXXXXFE*QVSHRVTNQVPV 431
E++VV LKL LPF HV+DL +L LPGPDL + E* V +R+TNQV V
Sbjct: 606 EINVVTLKLYLPFDHVVDLTR*ELILPGPDLCNAFLEAAFELLQLLE**VPNRITNQVLV 427
Query: 430 SVLQHLDLVAQFCGF 386
SVLQHLDLVA C F
Sbjct: 426 SVLQHLDLVAHLCSF 382
Score = 50.6 bits (104), Expect(3) = 3e-053
Identities = 22/32 (68%), Positives = 25/32 (78%)
Frame = +1 / +3
Query: 106 GEGKD*DQEDREQHEPAGHLLQAPQWAPQEGV 201
GEGKD*DQED E H P G LLQAP+ A +EG+
Sbjct: 102 GEGKD*DQED*EYH*PPGDLLQAPERALEEGL 197
Score = 25.8 bits (50), Expect(3) = 3e-053
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +3 / +2
Query: 72 LLERNKLRSPAWGGEGL 122
L N + P WGGEGL
Sbjct: 68 LARANTKKRPRWGGEGL 118
>gb|BU979487.1|BU979487 HA16F04r HA Hordeum vulgare subsp. vulgare cDNA clone HA16F04
5-PRIME, mRNA sequence
Length = 629
Score = 347 bits (751), Expect = 1e-094
Identities = 147/173 (84%), Positives = 164/173 (94%)
Frame = +2 / +3
Query: 92 EISSMGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYE 271
E + MGRGRIEIKRIEN TSRQVTFCKRRNGLLKKAYELSVLCDAEVAL+VFSSRGRLYE
Sbjct: 111 EAAEMGRGRIEIKRIENTTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYE 290
Query: 272 YANNSVKATIERYKKAHAVGSSSGPPLLEHNAQQFYQQESAKLRNQIQMLQNTNRHLVGD 451
Y+NNSVKATIERYKKAHA GS+SG PL+E NAQQ+YQQE+AK+R+QIQMLQNTN+HLVGD
Sbjct: 291 YSNNSVKATIERYKKAHACGSTSGAPLIEVNAQQYYQQETAKMRHQIQMLQNTNKHLVGD 470
Query: 452 SVGNLSLKELKQLESRLEKGISKIRARKSELLAAEINYMAKRETELQNDHMNL 610
SVGNLSLKELKQLESRLEKGI+KIRARK+ELL+ EINYM KRE ELQ+D+++L
Sbjct: 471 SVGNLSLKELKQLESRLEKGIAKIRARKNELLSCEINYMVKREIELQSDNIDL 629
Score = 196 bits (423), Expect = 2e-049
Identities = 88/121 (72%), Positives = 90/121 (74%)
Frame = -2 / -2
Query: 513 MPXXXXXXXXXXXXSDKFPTESPTKCLLVFCSIWIWLRSFADSCW*NCWALCSKSGGPEE 334
MP SD+FPTESPTKCLLVFCSIWIW R FA SCW* C AL S G PE
Sbjct: 532 MPFSRRLSSCFSSLSDRFPTESPTKCLLVFCSIWIWWRIFAVSCW*YC*ALTSMRGAPEV 353
Query: 333 EPTACAFLYLSIVAFTLLLAYS*RRPRLEKTTSATSASQRTESSYAFLRSPLRRLQKVTC 154
EP ACAFLYLSIVA TLLL YS*RRPRLEKT SATSAS RTESS AF +SP RRLQKVT
Sbjct: 352 EPQACAFLYLSIVALTLLLEYS*RRPRLEKTMSATSASHRTESS*AFFKSPFRRLQKVTW 173
Query: 153 R 151
R
Sbjct: 172 R 170
Score = 171 bits (369), Expect(3) = 3e-053
Identities = 79/114 (69%), Positives = 86/114 (75%)
Frame = +1 / +2
Query: 262 PLRVRQQQCEGYDREVQEGTRRWLFLWPPTLRAQCPAILPARIRKTAQPDPDAAKH*QAL 441
PL V QQQC+GY+ EVQEGT WL LW + R+QC AILPAR K A PDPDAAKH*QAL
Sbjct: 281 PL*VLQQQCQGYN*EVQEGTCLWLNLWGTSHRSQCSAILPARNCKDAPPDPDAAKH*QAL 460
Query: 442 GW*LCGKLVTQRAEAAGEPP*ERHL*DQGQEE*AAGCRDQLHGQKGD*ASE*PH 603
GW* C + +TQ AEAA +PP ERH DQGQEE*A DQLHGQKGD ASE* H
Sbjct: 461 GW*FCWEPITQGAEAARKPPRERHCKDQGQEE*APIL*DQLHGQKGDRASE*QH 622
Score = 149 bits (321), Expect = 2e-035
Identities = 69/104 (66%), Positives = 78/104 (75%)
Frame = +3 / +1
Query: 291 RLRSRGTRRHTPLALPLAPHS*STMPSNSTSKNPQNCATRSRCCKTLTGTWLVTLWETCH 470
RL+ RGTRRH +A PL S* +M SN+TSK Q CATRSRCCKTLT TWLV L T H
Sbjct: 310 RLQLRGTRRHMLVAQPLGHLS*KSMLSNTTSKKLQRCATRSRCCKTLTSTWLVILLGTYH 489
Query: 471 SKS*SSWRAALRKASLRSGPGRVSCWLPRSITWPKGRLSFRMTT 602
S+S*SS +AA RKA RSGPGR+S +L RS TW KGR SFR+TT
Sbjct: 490 SRS*SSSKAASRKALQRSGPGRMSSYLVRSTTWSKGR*SFRVTT 621
Score = 149 bits (320), Expect = 3e-035
Identities = 70/108 (64%), Positives = 78/108 (72%)
Frame = -3 / -3
Query: 602 CGHSEAQSPFWPCN*SRQPAAHSSWP*S*RCLSQGGSPAASAL*VTSFPQSHQPSAC*CF 423
C HSEA SPF PC+*S + AHSSWP*S +CLS+GG AASA *V Q+HQPSAC*CF
Sbjct: 621 CCHSEALSPF*PCS*SHKIGAHSSWP*SLQCLSRGGFRAASAP*VIGSQQNHQPSAC*CF 442
Query: 422 AASGSGCAVLRILAGRIAGHCALRVGGQRKSQRRVPSCTSRS*PSHCC 279
AASGSG A L+ LAG IA H L QR S + VPSCTS+ *P HCC
Sbjct: 441 AASGSGGASLQFLAGSIAEH*LL*EVPQRLSHKHVPSCTSQL*P*HCC 298
Score = 139 bits (299), Expect(2) = 1e-052
Identities = 59/81 (72%), Positives = 69/81 (85%)
Frame = -1 / -1
Query: 340 RGRANGVCLLVPLDRSLHTVVGVLVEASAAGEDDERHLGVAEDGELVRLLEEPIAALAEG 161
RG A +CLLVPL+ SL TVVGVL+EA+AAG+DDERHLGVA+DGELV LL+EP+ ALAEG
Sbjct: 359 RG*ATSMCLLVPLNCSLDTVVGVLIEAAAAGKDDERHLGVAQDGELVGLLQEPVPALAEG 180
Query: 160 DLPARVVLDPLDLNPSPPHAG 98
L A +L+PLDLNPSPPH G
Sbjct: 179 HLAASGILNPLDLNPSPPHLG 117
Score = 87.7 bits (185), Expect(2) = 1e-052
Identities = 41/75 (54%), Positives = 48/75 (64%)
Frame = -1 / -1
Query: 610 EVHVVILKLSLPFGHVIDLGSQQLTLPGPDLRDXXXXXXXXXXXXFE*QVSHRVTNQVPV 431
E++VV LKL LPF HV+DL +L LPGPDL + E* V +R+TNQV V
Sbjct: 629 EINVVTLKLYLPFDHVVDLTR*ELILPGPDLCNAFLEAAFELLQLLE**VPNRITNQVLV 450
Query: 430 SVLQHLDLVAQFCGF 386
SVLQHLDLVA C F
Sbjct: 449 SVLQHLDLVAHLCSF 405
Score = 50.6 bits (104), Expect(3) = 3e-053
Identities = 22/32 (68%), Positives = 25/32 (78%)
Frame = +1 / +2
Query: 106 GEGKD*DQEDREQHEPAGHLLQAPQWAPQEGV 201
GEGKD*DQED E H P G LLQAP+ A +EG+
Sbjct: 125 GEGKD*DQED*EYH*PPGDLLQAPERALEEGL 220
Score = 25.8 bits (50), Expect(3) = 3e-053
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +3 / +1
Query: 72 LLERNKLRSPAWGGEGL 122
L N + P WGGEGL
Sbjct: 91 LARANTKKRPRWGGEGL 141
>gb|CA025113.1|CA025113 HZ51D24r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ51D24
5-PRIME, mRNA sequence
Length = 490
Score = 277 bits (600), Expect = 7e-074
Identities = 117/133 (87%), Positives = 127/133 (95%)
Frame = +2 / +1
Query: 92 EISSMGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYE 271
E + MGRGRIEIKRIEN TSRQVTFCKRRNGLLKKAYELSVLCDAEVAL+VFSSRGRLYE
Sbjct: 91 EAAEMGRGRIEIKRIENTTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYE 270
Query: 272 YANNSVKATIERYKKAHAVGSSSGPPLLEHNAQQFYQQESAKLRNQIQMLQNTNRHLVGD 451
Y+NNSVKATIERYKKAHA GS+SG PL+E NAQQ+YQQE+AK+R+QIQMLQNTN+HLVGD
Sbjct: 271 YSNNSVKATIERYKKAHACGSTSGAPLIEVNAQQYYQQETAKMRHQIQMLQNTNKHLVGD 450
Query: 452 SVGNLSLKELKQL 490
SVGNLSLKELKQL
Sbjct: 451 SVGNLSLKELKQL 489
Score = 194 bits (419), Expect = 6e-049
Identities = 85/106 (80%), Positives = 87/106 (82%)
Frame = -2 / -3
Query: 468 DKFPTESPTKCLLVFCSIWIWLRSFADSCW*NCWALCSKSGGPEEEPTACAFLYLSIVAF 289
D+FPTESPTKCLLVFCSIWIW R FA SCW* C AL S G PE EP ACAFLYLSIVA
Sbjct: 467 DRFPTESPTKCLLVFCSIWIWWRIFAVSCW*YC*ALTSMRGAPEVEPQACAFLYLSIVAL 288
Query: 288 TLLLAYS*RRPRLEKTTSATSASQRTESSYAFLRSPLRRLQKVTCR 151
TLLL YS*RRPRLEKT SATSAS RTESS AF +SP RRLQKVT R
Sbjct: 287 TLLLEYS*RRPRLEKTMSATSASHRTESS*AFFKSPFRRLQKVTWR 150
Score = 139 bits (299), Expect(2) = 1e-040
Identities = 59/81 (72%), Positives = 69/81 (85%)
Frame = -1 / -2
Query: 340 RGRANGVCLLVPLDRSLHTVVGVLVEASAAGEDDERHLGVAEDGELVRLLEEPIAALAEG 161
RG A +CLLVPL+ SL TVVGVL+EA+AAG+DDERHLGVA+DGELV LL+EP+ ALAEG
Sbjct: 339 RG*ATSMCLLVPLNCSLDTVVGVLIEAAAAGKDDERHLGVAQDGELVGLLQEPVPALAEG 160
Query: 160 DLPARVVLDPLDLNPSPPHAG 98
L A +L+PLDLNPSPPH G
Sbjct: 159 HLAASGILNPLDLNPSPPHLG 97
Score = 118 bits (252), Expect(3) = 2e-037
Identities = 52/76 (68%), Positives = 58/76 (76%)
Frame = +1 / +3
Query: 262 PLRVRQQQCEGYDREVQEGTRRWLFLWPPTLRAQCPAILPARIRKTAQPDPDAAKH*QAL 441
PL V QQQC+GY+ EVQEGT WL LW + R+QC AILPAR K A PDPDAAKH*QAL
Sbjct: 261 PL*VLQQQCQGYN*EVQEGTCLWLNLWGTSHRSQCSAILPARNCKDAPPDPDAAKH*QAL 440
Query: 442 GW*LCGKLVTQRAEAA 489
GW* C + +TQ AEAA
Sbjct: 441 GW*FCWEPITQGAEAA 488
Score = 50.6 bits (104), Expect(3) = 2e-037
Identities = 22/32 (68%), Positives = 25/32 (78%)
Frame = +1 / +3
Query: 106 GEGKD*DQEDREQHEPAGHLLQAPQWAPQEGV 201
GEGKD*DQED E H P G LLQAP+ A +EG+
Sbjct: 105 GEGKD*DQED*EYH*PPGDLLQAPERALEEGL 200
Score = 47.3 bits (97), Expect(2) = 1e-040
Identities = 21/29 (72%), Positives = 23/29 (79%)
Frame = -1 / -2
Query: 472 E*QVSHRVTNQVPVSVLQHLDLVAQFCGF 386
E* V +R+TNQV VSVLQHLDLVA C F
Sbjct: 471 E**VPNRITNQVLVSVLQHLDLVAHLCSF 385
Score = 25.8 bits (50), Expect(3) = 2e-037
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +3 / +2
Query: 72 LLERNKLRSPAWGGEGL 122
L N + P WGGEGL
Sbjct: 71 LARANTKKRPRWGGEGL 121
>gb|AF486649.1| Hordeum vulgare subsp. vulgare AGAMOUS-like protein 2 HvAG2 (AG2)
mRNA, complete cds
Length = 1068
Score = 166 bits (357), Expect(2) = 5e-073
Identities = 72/85 (84%), Positives = 77/85 (90%)
Frame = +2 / +3
Query: 89 AEISSMGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLY 268
A MGRGRIEIKRIEN T+RQ+TFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLY
Sbjct: 75 AAAEKMGRGRIEIKRIENTTNRQLTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLY 254
Query: 269 EYANNSVKATIERYKKAHAVGSSSG 343
EY+NNSVKATIERYKKA + SS+G
Sbjct: 255 EYSNNSVKATIERYKKATSDTSSAG 329
Score = 129 bits (276), Expect(2) = 5e-073
Identities = 55/88 (62%), Positives = 70/88 (79%)
Frame = +2 / +3
Query: 371 QFYQQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKGISKIRARKSELLA 550
Q YQQESAKLR QI LQN+NR L+GD++ +S ++LKQLE RL+KG+ KIRARK+ELL+
Sbjct: 351 QHYQQESAKLRQQITTLQNSNRTLIGDTMATMSHRDLKQLEGRLDKGLGKIRARKNELLS 530
Query: 551 AEINYMAKRETELQNDHMNLRTKIEEGE 634
AEI YM +RE ELQN++ LR K+ E E
Sbjct: 531 AEIEYMQRREMELQNNNFYLREKVAETE 614
Score = 114 bits (244), Expect(3) = 1e-032
Identities = 52/64 (81%), Positives = 55/64 (85%)
Frame = -2 / -3
Query: 342 PEEEPTACAFLYLSIVAFTLLLAYS*RRPRLEKTTSATSASQRTESSYAFLRSPLRRLQK 163
P E + AFLYLS+VA TLLL YS*RRPRLEKTTSATSASQ TESSYAF RSPLRRLQK
Sbjct: 328 PALEVSLVAFLYLSMVALTLLLEYS*RRPRLEKTTSATSASQSTESSYAFFRSPLRRLQK 149
Query: 162 VTCR 151
V+CR
Sbjct: 148 VSCR 137
Score = 109 bits (233), Expect(2) = 4e-024
Identities = 49/72 (68%), Positives = 56/72 (77%)
Frame = -1 / -2
Query: 319 CLLVPLDRSLHTVVGVLVEASAAGEDDERHLGVAEDGELVRLLEEPIAALAEGDLPARVV 140
CLLV L+ L VVGVL+EA AAG+DDER L VAE ELVRLL+E +AALAEG+LP R V
Sbjct: 305 CLLVSLNGCLDAVVGVLIEAPAAGKDDERDLSVAEHRELVRLLQESVAALAEGELPVRRV 126
Query: 139 LDPLDLNPSPPH 104
LD LDL+P PH
Sbjct: 125 LDALDLDPPSPH 90
Score = 37.7 bits (76), Expect(3) = 1e-032
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = -2 / -3
Query: 450 SPTKCLLVFCSIWIWLRSFADSCW* 376
SP + LL FC + I SFADSCW*
Sbjct: 430 SPIRVLLEFCKVVICCLSFADSCW* 356
Score = 25.8 bits (50), Expect(3) = 1e-032
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = -1 / -2
Query: 613 PEVHVVILKLSLPFGHVIDLGS 548
P+V VVIL+L P HV++ +
Sbjct: 593 PQVEVVILQLHFPSLHVLNFSA 528
Score = 22.1 bits (42), Expect(2) = 4e-024
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = -1 / -2
Query: 460 SHRVTNQVPVSVLQHLDLVAQFCGF 386
SH + PV VLQ L+ Q C F
Sbjct: 440 SHGIAY*SPVGVLQGGYLLPQLCRF 366
>gb|AL509053.1|AL509053 AL509053 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY10J07V 5',
mRNA sequence
Length = 700
Score = 167 bits (360), Expect(2) = 5e-073
Identities = 73/85 (85%), Positives = 77/85 (90%)
Frame = +2 / +2
Query: 89 AEISSMGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLY 268
A MGRGRIEIKRIEN T+RQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLY
Sbjct: 122 AAAEKMGRGRIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLY 301
Query: 269 EYANNSVKATIERYKKAHAVGSSSG 343
EY+NNSVKATIERYKKA + SS+G
Sbjct: 302 EYSNNSVKATIERYKKATSDTSSAG 376
Score = 127 bits (273), Expect(2) = 5e-073
Identities = 54/86 (62%), Positives = 69/86 (80%)
Frame = +2 / +2
Query: 371 QFYQQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKGISKIRARKSELLA 550
Q YQQESAKLR QI LQN+NR L+GD++ +S ++LKQLE RL+KG+ KIRARK+ELL+
Sbjct: 398 QHYQQESAKLRQQITTLQNSNRTLIGDTMATMSHRDLKQLEGRLDKGLGKIRARKNELLS 577
Query: 551 AEINYMAKRETELQNDHMNLRTKIEE 628
AEI YM +RE ELQN++ LR K+ E
Sbjct: 578 AEIEYMQRREMELQNNNFYLREKVAE 655
Score = 116 bits (248), Expect(3) = 4e-033
Identities = 53/64 (82%), Positives = 55/64 (85%)
Frame = -2 / -2
Query: 342 PEEEPTACAFLYLSIVAFTLLLAYS*RRPRLEKTTSATSASQRTESSYAFLRSPLRRLQK 163
P E + AFLYLS+VA TLLL YS*RRPRLEKTTSATSASQ TESSYAF RSPLRRLQK
Sbjct: 375 PALEVSLVAFLYLSMVALTLLLEYS*RRPRLEKTTSATSASQSTESSYAFFRSPLRRLQK 196
Query: 162 VTCR 151
VTCR
Sbjct: 195 VTCR 184
Score = 111 bits (237), Expect(2) = 1e-024
Identities = 50/72 (69%), Positives = 56/72 (77%)
Frame = -1 / -1
Query: 319 CLLVPLDRSLHTVVGVLVEASAAGEDDERHLGVAEDGELVRLLEEPIAALAEGDLPARVV 140
CLLV L+ L VVGVL+EA AAG+DDER L VAE ELVRLL+E +AALAEGDLP R V
Sbjct: 352 CLLVSLNGCLDAVVGVLIEAPAAGKDDERDLSVAEHRELVRLLQESVAALAEGDLPVRRV 173
Query: 139 LDPLDLNPSPPH 104
LD LDL+P PH
Sbjct: 172 LDALDLDPPSPH 137
Score = 37.7 bits (76), Expect(3) = 4e-033
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = -2 / -2
Query: 450 SPTKCLLVFCSIWIWLRSFADSCW* 376
SP + LL FC + I SFADSCW*
Sbjct: 477 SPIRVLLEFCKVVICCLSFADSCW* 403
Score = 25.8 bits (50), Expect(3) = 4e-033
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = -1 / -1
Query: 613 PEVHVVILKLSLPFGHVIDLGS 548
P+V VVIL+L P HV++ +
Sbjct: 640 PQVEVVILQLHFPSLHVLNFSA 575
Score = 22.1 bits (42), Expect(2) = 1e-024
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = -1 / -1
Query: 460 SHRVTNQVPVSVLQHLDLVAQFCGF 386
SH + PV VLQ L+ Q C F
Sbjct: 487 SHGIAY*SPVGVLQGGYLLPQLCRF 413
>gb|BQ764786.1|BQ764786 EBca01_SQ004_L21_R carpel, pre-anthesis, no treatment, cv Optic,
EBca01 Hordeum vulgare subsp. vulgare cDNA clone
EBca01_SQ004_L21 5', mRNA sequence
Length = 719
Score = 167 bits (360), Expect(2) = 1e-072
Identities = 73/85 (85%), Positives = 77/85 (90%)
Frame = +2 / +3
Query: 89 AEISSMGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLY 268
A MGRGRIEIKRIEN T+RQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLY
Sbjct: 99 AAAEKMGRGRIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLY 278
Query: 269 EYANNSVKATIERYKKAHAVGSSSG 343
EY+NNSVKATIERYKKA + SS+G
Sbjct: 279 EYSNNSVKATIERYKKATSDTSSAG 353
Score = 126 bits (270), Expect(2) = 1e-072
Identities = 54/88 (61%), Positives = 69/88 (78%)
Frame = +2 / +3
Query: 371 QFYQQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKGISKIRARKSELLA 550
Q YQQESAKLR QI LQN+NR L+GD++ +S ++LKQLE RL+KG+ KI ARK+ELL+
Sbjct: 375 QHYQQESAKLRQQITTLQNSNRTLIGDTMATMSHRDLKQLEGRLDKGLGKIXARKNELLS 554
Query: 551 AEINYMAKRETELQNDHMNLRTKIEEGE 634
AEI YM +RE ELQN++ LR K+ E E
Sbjct: 555 AEIEYMQRREMELQNNNFYLREKVAETE 638
Score = 116 bits (248), Expect(3) = 4e-033
Identities = 53/64 (82%), Positives = 55/64 (85%)
Frame = -2 / -2
Query: 342 PEEEPTACAFLYLSIVAFTLLLAYS*RRPRLEKTTSATSASQRTESSYAFLRSPLRRLQK 163
P E + AFLYLS+VA TLLL YS*RRPRLEKTTSATSASQ TESSYAF RSPLRRLQK
Sbjct: 352 PALEVSLVAFLYLSMVALTLLLEYS*RRPRLEKTTSATSASQSTESSYAFFRSPLRRLQK 173
Query: 162 VTCR 151
VTCR
Sbjct: 172 VTCR 161
Score = 111 bits (237), Expect(2) = 1e-024
Identities = 50/72 (69%), Positives = 56/72 (77%)
Frame = -1 / -1
Query: 319 CLLVPLDRSLHTVVGVLVEASAAGEDDERHLGVAEDGELVRLLEEPIAALAEGDLPARVV 140
CLLV L+ L VVGVL+EA AAG+DDER L VAE ELVRLL+E +AALAEGDLP R V
Sbjct: 329 CLLVSLNGCLDAVVGVLIEAPAAGKDDERDLSVAEHRELVRLLQESVAALAEGDLPVRRV 150
Query: 139 LDPLDLNPSPPH 104
LD LDL+P PH
Sbjct: 149 LDALDLDPPSPH 114
Score = 37.7 bits (76), Expect(3) = 4e-033
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = -2 / -2
Query: 450 SPTKCLLVFCSIWIWLRSFADSCW* 376
SP + LL FC + I SFADSCW*
Sbjct: 454 SPIRVLLEFCKVVICCLSFADSCW* 380
Score = 25.8 bits (50), Expect(3) = 4e-033
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = -1 / -1
Query: 613 PEVHVVILKLSLPFGHVIDLGS 548
P+V VVIL+L P HV++ +
Sbjct: 617 PQVEVVILQLHFPSLHVLNFSA 552
Score = 22.1 bits (42), Expect(2) = 1e-024
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = -1 / -1
Query: 460 SHRVTNQVPVSVLQHLDLVAQFCGF 386
SH + PV VLQ L+ Q C F
Sbjct: 464 SHGIAY*SPVGVLQGGYLLPQLCRF 390
>gb|BG414586.2|BG414586 HVSMEk0002P16f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0002P16f, mRNA sequence
Length = 804
Score = 167 bits (360), Expect(2) = 2e-072
Identities = 73/85 (85%), Positives = 77/85 (90%)
Frame = +2 / +3
Query: 89 AEISSMGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLY 268
A MGRGRIEIKRIEN T+RQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLY
Sbjct: 117 AAAEKMGRGRIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLY 296
Query: 269 EYANNSVKATIERYKKAHAVGSSSG 343
EY+NNSVKATIERYKKA + SS+G
Sbjct: 297 EYSNNSVKATIERYKKATSDTSSAG 371
Score = 125 bits (268), Expect(2) = 2e-072
Identities = 53/88 (60%), Positives = 69/88 (78%)
Frame = +2 / +3
Query: 371 QFYQQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKGISKIRARKSELLA 550
Q YQQESAKLR QI LQN+NR L+GD++ +S ++LK LE RL+KG+ KIRARK+ELL+
Sbjct: 393 QHYQQESAKLRQQITTLQNSNRTLIGDTMATMSHRDLKHLEGRLDKGLXKIRARKNELLS 572
Query: 551 AEINYMAKRETELQNDHMNLRTKIEEGE 634
AEI YM ++E ELQN++ LR K+ E E
Sbjct: 573 AEIEYMQRKEMELQNNNFYLREKVAETE 656
Score = 116 bits (248), Expect(2) = 9e-031
Identities = 53/64 (82%), Positives = 55/64 (85%)
Frame = -2 / -3
Query: 342 PEEEPTACAFLYLSIVAFTLLLAYS*RRPRLEKTTSATSASQRTESSYAFLRSPLRRLQK 163
P E + AFLYLS+VA TLLL YS*RRPRLEKTTSATSASQ TESSYAF RSPLRRLQK
Sbjct: 370 PALEVSLVAFLYLSMVALTLLLEYS*RRPRLEKTTSATSASQSTESSYAFFRSPLRRLQK 191
Query: 162 VTCR 151
VTCR
Sbjct: 190 VTCR 179
Score = 111 bits (237), Expect(2) = 1e-024
Identities = 50/72 (69%), Positives = 56/72 (77%)
Frame = -1 / -2
Query: 319 CLLVPLDRSLHTVVGVLVEASAAGEDDERHLGVAEDGELVRLLEEPIAALAEGDLPARVV 140
CLLV L+ L VVGVL+EA AAG+DDER L VAE ELVRLL+E +AALAEGDLP R V
Sbjct: 347 CLLVSLNGCLDAVVGVLIEAPAAGKDDERDLSVAEHRELVRLLQESVAALAEGDLPVRRV 168
Query: 139 LDPLDLNPSPPH 104
LD LDL+P PH
Sbjct: 167 LDALDLDPPSPH 132
Score = 37.7 bits (76), Expect(2) = 9e-031
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = -2 / -3
Query: 450 SPTKCLLVFCSIWIWLRSFADSCW* 376
SP + LL FC + I SFADSCW*
Sbjct: 472 SPIRVLLEFCKVVICCLSFADSCW* 398
Score = 22.1 bits (42), Expect(2) = 1e-024
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = -1 / -2
Query: 460 SHRVTNQVPVSVLQHLDLVAQFCGF 386
SH + PV VLQ L+ Q C F
Sbjct: 482 SHGIAY*SPVGVLQGGYLLPQLCRF 408
>gb|BE454695.2|BE454695 HVSMEh0095C18f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0095C18f, mRNA sequence
Length = 880
Score = 167 bits (360), Expect(2) = 4e-072
Identities = 73/85 (85%), Positives = 77/85 (90%)
Frame = +2 / +3
Query: 89 AEISSMGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLY 268
A MGRGRIEIKRIEN T+RQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLY
Sbjct: 117 AAAEKMGRGRIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLY 296
Query: 269 EYANNSVKATIERYKKAHAVGSSSG 343
EY+NNSVKATIERYKKA + SS+G
Sbjct: 297 EYSNNSVKATIERYKKATSDTSSAG 371
Score = 124 bits (266), Expect(2) = 4e-072
Identities = 53/84 (63%), Positives = 67/84 (79%)
Frame = +2 / +3
Query: 371 QFYQQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKGISKIRARKSELLA 550
Q YQQESAKLR QI LQN+NR L+GD++ +S ++LKQLE RL+KG+ KIRARK+ELL+
Sbjct: 393 QHYQQESAKLRQQITTLQNSNRTLIGDTMATMSHRDLKQLEGRLDKGLGKIRARKNELLS 572
Query: 551 AEINYMAKRETELQNDHMNLRTKI 622
AEI YM KRE EL N++ LR K+
Sbjct: 573 AEIEYMQKREMELANNNFYLREKV 644
Score = 116 bits (248), Expect(3) = 5e-034
Identities = 53/64 (82%), Positives = 55/64 (85%)
Frame = -2 / -1
Query: 342 PEEEPTACAFLYLSIVAFTLLLAYS*RRPRLEKTTSATSASQRTESSYAFLRSPLRRLQK 163
P E + AFLYLS+VA TLLL YS*RRPRLEKTTSATSASQ TESSYAF RSPLRRLQK
Sbjct: 370 PALEVSLVAFLYLSMVALTLLLEYS*RRPRLEKTTSATSASQSTESSYAFFRSPLRRLQK 191
Query: 162 VTCR 151
VTCR
Sbjct: 190 VTCR 179
Score = 111 bits (237), Expect(2) = 1e-024
Identities = 50/72 (69%), Positives = 56/72 (77%)
Frame = -1 / -3
Query: 319 CLLVPLDRSLHTVVGVLVEASAAGEDDERHLGVAEDGELVRLLEEPIAALAEGDLPARVV 140
CLLV L+ L VVGVL+EA AAG+DDER L VAE ELVRLL+E +AALAEGDLP R V
Sbjct: 347 CLLVSLNGCLDAVVGVLIEAPAAGKDDERDLSVAEHRELVRLLQESVAALAEGDLPVRRV 168
Query: 139 LDPLDLNPSPPH 104
LD LDL+P PH
Sbjct: 167 LDALDLDPPSPH 132
Score = 37.7 bits (76), Expect(3) = 5e-034
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = -2 / -1
Query: 450 SPTKCLLVFCSIWIWLRSFADSCW* 376
SP + LL FC + I SFADSCW*
Sbjct: 472 SPIRVLLEFCKVVICCLSFADSCW* 398
Score = 29.0 bits (57), Expect(3) = 5e-034
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -1 / -3
Query: 613 PEVHVVILKLSLPFGHVIDLGS 548
P+V VVI KL PF HV++ +
Sbjct: 635 PQVEVVICKLHFPFLHVLNFSA 570
Score = 22.1 bits (42), Expect(2) = 1e-024
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = -1 / -3
Query: 460 SHRVTNQVPVSVLQHLDLVAQFCGF 386
SH + PV VLQ L+ Q C F
Sbjct: 482 SHGIAY*SPVGVLQGGYLLPQLCRF 408
>gb|BU996265.1|BU996265 HM13B01r HM Hordeum vulgare subsp. vulgare cDNA clone HM13B01
5-PRIME, mRNA sequence
Length = 637
Score = 167 bits (360), Expect(2) = 1e-070
Identities = 73/85 (85%), Positives = 77/85 (90%)
Frame = +2 / +2
Query: 89 AEISSMGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLY 268
A MGRGRIEIKRIEN T+RQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLY
Sbjct: 125 AAAEKMGRGRIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLY 304
Query: 269 EYANNSVKATIERYKKAHAVGSSSG 343
EY+NNSVKATIERYKKA + SS+G
Sbjct: 305 EYSNNSVKATIERYKKATSDTSSAG 379
Score = 119 bits (255), Expect(2) = 1e-070
Identities = 50/77 (64%), Positives = 64/77 (83%)
Frame = +2 / +2
Query: 371 QFYQQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKGISKIRARKSELLA 550
Q YQQESAKLR QI LQN+NR L+GD++ +S ++LKQLE RL+KG+ KIRARK+ELL+
Sbjct: 401 QHYQQESAKLRQQITTLQNSNRTLIGDTMATMSHRDLKQLEGRLDKGLGKIRARKNELLS 580
Query: 551 AEINYMAKRETELQNDH 601
AEI YM +RE ELQN++
Sbjct: 581 AEIEYMQRREMELQNNN 631
Score = 116 bits (248), Expect(2) = 9e-031
Identities = 53/64 (82%), Positives = 55/64 (85%)
Frame = -2 / -2
Query: 342 PEEEPTACAFLYLSIVAFTLLLAYS*RRPRLEKTTSATSASQRTESSYAFLRSPLRRLQK 163
P E + AFLYLS+VA TLLL YS*RRPRLEKTTSATSASQ TESSYAF RSPLRRLQK
Sbjct: 378 PALEVSLVAFLYLSMVALTLLLEYS*RRPRLEKTTSATSASQSTESSYAFFRSPLRRLQK 199
Query: 162 VTCR 151
VTCR
Sbjct: 198 VTCR 187
Score = 111 bits (237), Expect(2) = 1e-024
Identities = 50/72 (69%), Positives = 56/72 (77%)
Frame = -1 / -1
Query: 319 CLLVPLDRSLHTVVGVLVEASAAGEDDERHLGVAEDGELVRLLEEPIAALAEGDLPARVV 140
CLLV L+ L VVGVL+EA AAG+DDER L VAE ELVRLL+E +AALAEGDLP R V
Sbjct: 355 CLLVSLNGCLDAVVGVLIEAPAAGKDDERDLSVAEHRELVRLLQESVAALAEGDLPVRRV 176
Query: 139 LDPLDLNPSPPH 104
LD LDL+P PH
Sbjct: 175 LDALDLDPPSPH 140
Score = 37.7 bits (76), Expect(2) = 9e-031
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = -2 / -2
Query: 450 SPTKCLLVFCSIWIWLRSFADSCW* 376
SP + LL FC + I SFADSCW*
Sbjct: 480 SPIRVLLEFCKVVICCLSFADSCW* 406
Score = 22.1 bits (42), Expect(2) = 1e-024
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = -1 / -1
Query: 460 SHRVTNQVPVSVLQHLDLVAQFCGF 386
SH + PV VLQ L+ Q C F
Sbjct: 490 SHGIAY*SPVGVLQGGYLLPQLCRF 416
>gb|BG367358.1|BG367358 HVSMEi0011P20f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0011P20f, mRNA sequence
Length = 512
Score = 167 bits (360), Expect(2) = 2e-070
Identities = 73/85 (85%), Positives = 77/85 (90%)
Frame = +2 / +2
Query: 89 AEISSMGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLY 268
A MGRGRIEIKRIEN T+RQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLY
Sbjct: 8 AAAEKMGRGRIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLY 187
Query: 269 EYANNSVKATIERYKKAHAVGSSSG 343
EY+NNSVKATIERYKKA + SS+G
Sbjct: 188 EYSNNSVKATIERYKKATSDTSSAG 262
Score = 119 bits (254), Expect(2) = 2e-070
Identities = 50/76 (65%), Positives = 63/76 (82%)
Frame = +2 / +2
Query: 371 QFYQQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKGISKIRARKSELLA 550
Q YQQESAKLR QI LQN+NR L+GD++ +S ++LKQLE RL+KG+ KIRARK+ELL+
Sbjct: 284 QHYQQESAKLRQQITTLQNSNRTLIGDTMATMSHRDLKQLEGRLDKGLXKIRARKNELLS 463
Query: 551 AEINYMAKRETELQND 598
AEI YM +RE ELQN+
Sbjct: 464 AEIEYMQRREMELQNN 511
Score = 116 bits (248), Expect(2) = 9e-031
Identities = 53/64 (82%), Positives = 55/64 (85%)
Frame = -2 / -3
Query: 342 PEEEPTACAFLYLSIVAFTLLLAYS*RRPRLEKTTSATSASQRTESSYAFLRSPLRRLQK 163
P E + AFLYLS+VA TLLL YS*RRPRLEKTTSATSASQ TESSYAF RSPLRRLQK
Sbjct: 261 PALEVSLVAFLYLSMVALTLLLEYS*RRPRLEKTTSATSASQSTESSYAFFRSPLRRLQK 82
Query: 162 VTCR 151
VTCR
Sbjct: 81 VTCR 70
Score = 111 bits (237), Expect(2) = 1e-024
Identities = 50/72 (69%), Positives = 56/72 (77%)
Frame = -1 / -2
Query: 319 CLLVPLDRSLHTVVGVLVEASAAGEDDERHLGVAEDGELVRLLEEPIAALAEGDLPARVV 140
CLLV L+ L VVGVL+EA AAG+DDER L VAE ELVRLL+E +AALAEGDLP R V
Sbjct: 238 CLLVSLNGCLDAVVGVLIEAPAAGKDDERDLSVAEHRELVRLLQESVAALAEGDLPVRRV 59
Query: 139 LDPLDLNPSPPH 104
LD LDL+P PH
Sbjct: 58 LDALDLDPPSPH 23
Score = 37.7 bits (76), Expect(2) = 9e-031
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = -2 / -3
Query: 450 SPTKCLLVFCSIWIWLRSFADSCW* 376
SP + LL FC + I SFADSCW*
Sbjct: 363 SPIRVLLEFCKVVICCLSFADSCW* 289
Score = 22.1 bits (42), Expect(2) = 1e-024
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = -1 / -2
Query: 460 SHRVTNQVPVSVLQHLDLVAQFCGF 386
SH + PV VLQ L+ Q C F
Sbjct: 373 SHGIAY*SPVGVLQGGYLLPQLCRF 299
>gb|CA024629.1|CA024629 HZ49N15r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ49N15
5-PRIME, mRNA sequence
Length = 633
Score = 167 bits (360), Expect(2) = 8e-069
Identities = 73/85 (85%), Positives = 77/85 (90%)
Frame = +2 / +1
Query: 89 AEISSMGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLY 268
A MGRGRIEIKRIEN T+RQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLY
Sbjct: 139 AAAEKMGRGRIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLY 318
Query: 269 EYANNSVKATIERYKKAHAVGSSSG 343
EY+NNSVKATIERYKKA + SS+G
Sbjct: 319 EYSNNSVKATIERYKKATSDTSSAG 393
Score = 116 bits (248), Expect(2) = 9e-031
Identities = 53/64 (82%), Positives = 55/64 (85%)
Frame = -2 / -2
Query: 342 PEEEPTACAFLYLSIVAFTLLLAYS*RRPRLEKTTSATSASQRTESSYAFLRSPLRRLQK 163
P E + AFLYLS+VA TLLL YS*RRPRLEKTTSATSASQ TESSYAF RSPLRRLQK
Sbjct: 392 PALEVSLVAFLYLSMVALTLLLEYS*RRPRLEKTTSATSASQSTESSYAFFRSPLRRLQK 213
Query: 162 VTCR 151
VTCR
Sbjct: 212 VTCR 201
Score = 113 bits (242), Expect(2) = 8e-069
Identities = 48/73 (65%), Positives = 60/73 (82%)
Frame = +2 / +1
Query: 371 QFYQQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKGISKIRARKSELLA 550
Q YQQESAKLR QI LQN+NR L+GD++ +S ++LKQLE RL+KG+ KIRARK+ELL+
Sbjct: 415 QHYQQESAKLRQQITTLQNSNRTLIGDTMATMSHRDLKQLEGRLDKGLGKIRARKNELLS 594
Query: 551 AEINYMAKRETEL 589
AEI YM +RE EL
Sbjct: 595 AEIEYMQRREMEL 633
Score = 111 bits (237), Expect(2) = 1e-024
Identities = 50/72 (69%), Positives = 56/72 (77%)
Frame = -1 / -1
Query: 319 CLLVPLDRSLHTVVGVLVEASAAGEDDERHLGVAEDGELVRLLEEPIAALAEGDLPARVV 140
CLLV L+ L VVGVL+EA AAG+DDER L VAE ELVRLL+E +AALAEGDLP R V
Sbjct: 369 CLLVSLNGCLDAVVGVLIEAPAAGKDDERDLSVAEHRELVRLLQESVAALAEGDLPVRRV 190
Query: 139 LDPLDLNPSPPH 104
LD LDL+P PH
Sbjct: 189 LDALDLDPPSPH 154
Score = 37.7 bits (76), Expect(2) = 9e-031
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = -2 / -2
Query: 450 SPTKCLLVFCSIWIWLRSFADSCW* 376
SP + LL FC + I SFADSCW*
Sbjct: 494 SPIRVLLEFCKVVICCLSFADSCW* 420
Score = 22.1 bits (42), Expect(2) = 1e-024
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = -1 / -1
Query: 460 SHRVTNQVPVSVLQHLDLVAQFCGF 386
SH + PV VLQ L+ Q C F
Sbjct: 504 SHGIAY*SPVGVLQGGYLLPQLCRF 430
>gb|AF486648.1| Hordeum vulgare subsp. vulgare AGAMOUS-like protein 1 HvAG1 (AG1)
mRNA, complete cds
Length = 1163
Score = 168 bits (361), Expect(2) = 3e-068
Identities = 72/80 (90%), Positives = 77/80 (96%)
Frame = +2 / +1
Query: 104 MGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYANN 283
MGRGRIEIKRIEN T+RQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEY+NN
Sbjct: 139 MGRGRIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYSNN 318
Query: 284 SVKATIERYKKAHAVGSSSG 343
SVKATIERYKKA++ S+SG
Sbjct: 319 SVKATIERYKKANSDTSNSG 378
Score = 116 bits (247), Expect(3) = 1e-030
Identities = 52/64 (81%), Positives = 55/64 (85%)
Frame = -2 / -1
Query: 342 PEEEPTACAFLYLSIVAFTLLLAYS*RRPRLEKTTSATSASQRTESSYAFLRSPLRRLQK 163
PE + + AFLYLS+VAFTLL YS*RRPRLEKTT ATSASQ TESSYAFLR PLRRLQK
Sbjct: 377 PELDVSLLAFLYLSMVAFTLLFEYS*RRPRLEKTTRATSASQSTESSYAFLRRPLRRLQK 198
Query: 162 VTCR 151
VTCR
Sbjct: 197 VTCR 186
Score = 111 bits (237), Expect(2) = 3e-068
Identities = 49/101 (48%), Positives = 70/101 (69%)
Frame = +2 / +1
Query: 332 SSSGPPLLEHNAQQFYQQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKG 511
+S+ + E NAQ + Q+ S + + + +R LV DSV ++L++LKQLE RLEKG
Sbjct: 364 TSNSGTVAEVNAQYYQQESSKLRQQISSLQNSNSRSLVRDSVSTMTLRDLKQLEGRLEKG 543
Query: 512 ISKIRARKSELLAAEINYMAKRETELQNDHMNLRTKIEEGE 634
I+KIRARK+EL+ AE+ YM KRE EL ND++ LR+K+ E E
Sbjct: 544 IAKIRARKNELMYAEVEYMQKREMELHNDNIYLRSKVSENE 666
Score = 111 bits (236), Expect = 1e-023
Identities = 51/73 (69%), Positives = 55/73 (75%)
Frame = -1 / -3
Query: 322 VCLLVPLDRSLHTVVGVLVEASAAGEDDERHLGVAEDGELVRLLEEPIAALAEGDLPARV 143
V L VPL+ HTVV V VEA AAGEDDE LGV E ELVRLLEE +AALAEGDLP
Sbjct: 357 VGLFVPLNGGFHTVV*VFVEAPAAGEDDEGDLGVTEHRELVRLLEEAVAALAEGDLPVGG 178
Query: 142 VLDPLDLNPSPPH 104
VLD LDL+P+PPH
Sbjct: 177 VLDALDLDPAPPH 139
Score = 28.6 bits (56), Expect(3) = 1e-030
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = -2 / -1
Query: 435 LLVFCSIWIWLRSFADSCW* 376
L FC + I RS DSCW*
Sbjct: 464 LFEFCKLLICWRSLEDSCW* 405
Score = 26.7 bits (52), Expect(3) = 1e-030
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = -1 / -3
Query: 613 PEVHVVILKLSLPFGHVIDLGSQQLTL 533
P+V+V+++ L P H+++ QL L
Sbjct: 645 PQVNVIVM*LHFPLLHILNFSIHQLIL 565
>gb|AL506480.1|AL506480 AL506480 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY03E14T 5',
mRNA sequence
Length = 700
Score = 167 bits (360), Expect(2) = 5e-067
Identities = 73/85 (85%), Positives = 77/85 (90%)
Frame = +2 / +1
Query: 89 AEISSMGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLY 268
A MGRGRIEIKRIEN T+RQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLY
Sbjct: 94 AAAEKMGRGRIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLY 273
Query: 269 EYANNSVKATIERYKKAHAVGSSSG 343
EY+NNSVKATIERYKKA + SS+G
Sbjct: 274 EYSNNSVKATIERYKKATSDTSSAG 348
Score = 116 bits (248), Expect(2) = 9e-031
Identities = 53/64 (82%), Positives = 55/64 (85%)
Frame = -2 / -3
Query: 342 PEEEPTACAFLYLSIVAFTLLLAYS*RRPRLEKTTSATSASQRTESSYAFLRSPLRRLQK 163
P E + AFLYLS+VA TLLL YS*RRPRLEKTTSATSASQ TESSYAF RSPLRRLQK
Sbjct: 347 PALEVSLVAFLYLSMVALTLLLEYS*RRPRLEKTTSATSASQSTESSYAFFRSPLRRLQK 168
Query: 162 VTCR 151
VTCR
Sbjct: 167 VTCR 156
Score = 111 bits (237), Expect(2) = 1e-024
Identities = 50/72 (69%), Positives = 56/72 (77%)
Frame = -1 / -2
Query: 319 CLLVPLDRSLHTVVGVLVEASAAGEDDERHLGVAEDGELVRLLEEPIAALAEGDLPARVV 140
CLLV L+ L VVGVL+EA AAG+DDER L VAE ELVRLL+E +AALAEGDLP R V
Sbjct: 324 CLLVSLNGCLDAVVGVLIEAPAAGKDDERDLSVAEHRELVRLLQESVAALAEGDLPVRRV 145
Query: 139 LDPLDLNPSPPH 104
LD LDL+P PH
Sbjct: 144 LDALDLDPPSPH 109
Score = 107 bits (229), Expect(2) = 5e-067
Identities = 45/69 (65%), Positives = 57/69 (82%)
Frame = +2 / +1
Query: 371 QFYQQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKGISKIRARKSELLA 550
Q YQQESAKLR QI LQN+NR L+GD++ +S ++LKQLE RL+KG+ KIRARK+ELL+
Sbjct: 370 QHYQQESAKLRQQITTLQNSNRTLIGDTMATMSHRDLKQLEGRLDKGLGKIRARKNELLS 549
Query: 551 AEINYMAKR 577
AEI YM +R
Sbjct: 550 AEIEYMQRR 576
Score = 37.7 bits (76), Expect(2) = 9e-031
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = -2 / -3
Query: 450 SPTKCLLVFCSIWIWLRSFADSCW* 376
SP + LL FC + I SFADSCW*
Sbjct: 449 SPIRVLLEFCKVVICCLSFADSCW* 375
Score = 22.1 bits (42), Expect(2) = 1e-024
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = -1 / -2
Query: 460 SHRVTNQVPVSVLQHLDLVAQFCGF 386
SH + PV VLQ L+ Q C F
Sbjct: 459 SHGIAY*SPVGVLQGGYLLPQLCRF 385
>gb|BU975486.1|BU975486 HB31F02r BC Hordeum vulgare subsp. vulgare cDNA clone HB31F02
5-PRIME, mRNA sequence
Length = 501
Score = 146 bits (314), Expect(2) = 3e-066
Identities = 63/72 (87%), Positives = 68/72 (94%)
Frame = +2 / +1
Query: 128 KRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYANNSVKATIER 307
+RIEN T+RQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEY+NNSVKATIER
Sbjct: 10 ERIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYSNNSVKATIER 189
Query: 308 YKKAHAVGSSSG 343
YKKA + SS+G
Sbjct: 190 YKKATSDTSSAG 225
Score = 126 bits (269), Expect(2) = 3e-066
Identities = 53/84 (63%), Positives = 68/84 (80%)
Frame = +2 / +1
Query: 371 QFYQQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKGISKIRARKSELLA 550
Q YQQESAKLR QI LQN+NR L+GD++ +S ++LKQLE RL+KG+ KIRARK+ELL+
Sbjct: 247 QHYQQESAKLRQQITTLQNSNRTLIGDTMATMSHRDLKQLEGRLDKGLGKIRARKNELLS 426
Query: 551 AEINYMAKRETELQNDHMNLRTKI 622
AEI YM +RE ELQN++ LR K+
Sbjct: 427 AEIEYMQRREMELQNNNFYLREKV 498
Score = 116 bits (248), Expect(3) = 4e-033
Identities = 53/64 (82%), Positives = 55/64 (85%)
Frame = -2 / -2
Query: 342 PEEEPTACAFLYLSIVAFTLLLAYS*RRPRLEKTTSATSASQRTESSYAFLRSPLRRLQK 163
P E + AFLYLS+VA TLLL YS*RRPRLEKTTSATSASQ TESSYAF RSPLRRLQK
Sbjct: 224 PALEVSLVAFLYLSMVALTLLLEYS*RRPRLEKTTSATSASQSTESSYAFFRSPLRRLQK 45
Query: 162 VTCR 151
VTCR
Sbjct: 44 VTCR 33
Score = 37.7 bits (76), Expect(3) = 4e-033
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = -2 / -2
Query: 450 SPTKCLLVFCSIWIWLRSFADSCW* 376
SP + LL FC + I SFADSCW*
Sbjct: 326 SPIRVLLEFCKVVICCLSFADSCW* 252
Score = 25.8 bits (50), Expect(3) = 4e-033
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = -1 / -1
Query: 613 PEVHVVILKLSLPFGHVIDLGS 548
P+V VVIL+L P HV++ +
Sbjct: 489 PQVEVVILQLHFPSLHVLNFSA 424
>gb|CA025584.1|CA025584 HZ52J05r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ52J05
5-PRIME, mRNA sequence
Length = 574
Score = 167 bits (360), Expect(2) = 1e-064
Identities = 73/85 (85%), Positives = 77/85 (90%)
Frame = +2 / +1
Query: 89 AEISSMGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLY 268
A MGRGRIEIKRIEN T+RQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLY
Sbjct: 109 AAAEKMGRGRIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLY 288
Query: 269 EYANNSVKATIERYKKAHAVGSSSG 343
EY+NNSVKATIERYKKA + SS+G
Sbjct: 289 EYSNNSVKATIERYKKATSDTSSAG 363
Score = 116 bits (248), Expect(2) = 9e-031
Identities = 53/64 (82%), Positives = 55/64 (85%)
Frame = -2 / -3
Query: 342 PEEEPTACAFLYLSIVAFTLLLAYS*RRPRLEKTTSATSASQRTESSYAFLRSPLRRLQK 163
P E + AFLYLS+VA TLLL YS*RRPRLEKTTSATSASQ TESSYAF RSPLRRLQK
Sbjct: 362 PALEVSLVAFLYLSMVALTLLLEYS*RRPRLEKTTSATSASQSTESSYAFFRSPLRRLQK 183
Query: 162 VTCR 151
VTCR
Sbjct: 182 VTCR 171
Score = 111 bits (237), Expect(2) = 1e-024
Identities = 50/72 (69%), Positives = 56/72 (77%)
Frame = -1 / -2
Query: 319 CLLVPLDRSLHTVVGVLVEASAAGEDDERHLGVAEDGELVRLLEEPIAALAEGDLPARVV 140
CLLV L+ L VVGVL+EA AAG+DDER L VAE ELVRLL+E +AALAEGDLP R V
Sbjct: 339 CLLVSLNGCLDAVVGVLIEAPAAGKDDERDLSVAEHRELVRLLQESVAALAEGDLPVRRV 160
Query: 139 LDPLDLNPSPPH 104
LD LDL+P PH
Sbjct: 159 LDALDLDPPSPH 124
Score = 99.6 bits (211), Expect(2) = 1e-064
Identities = 42/63 (66%), Positives = 53/63 (84%)
Frame = +2 / +1
Query: 371 QFYQQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKGISKIRARKSELLA 550
Q YQQESAKLR QI LQN+NR L+GD++ +S ++LKQLE RL+KG+ KIRARK+ELL+
Sbjct: 385 QHYQQESAKLRQQITTLQNSNRTLIGDTMATMSHRDLKQLEGRLDKGLGKIRARKNELLS 564
Query: 551 AEI 559
AEI
Sbjct: 565 AEI 573
Score = 37.7 bits (76), Expect(2) = 9e-031
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = -2 / -3
Query: 450 SPTKCLLVFCSIWIWLRSFADSCW* 376
SP + LL FC + I SFADSCW*
Sbjct: 464 SPIRVLLEFCKVVICCLSFADSCW* 390
Score = 22.1 bits (42), Expect(2) = 1e-024
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = -1 / -2
Query: 460 SHRVTNQVPVSVLQHLDLVAQFCGF 386
SH + PV VLQ L+ Q C F
Sbjct: 474 SHGIAY*SPVGVLQGGYLLPQLCRF 400
>gb|CA025405.1|CA025405 HZ52B05r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ52B05
5-PRIME, mRNA sequence
Length = 553
Score = 167 bits (360), Expect(2) = 1e-064
Identities = 73/85 (85%), Positives = 77/85 (90%)
Frame = +2 / +2
Query: 89 AEISSMGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLY 268
A MGRGRIEIKRIEN T+RQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLY
Sbjct: 89 AAAEKMGRGRIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLY 268
Query: 269 EYANNSVKATIERYKKAHAVGSSSG 343
EY+NNSVKATIERYKKA + SS+G
Sbjct: 269 EYSNNSVKATIERYKKATSDTSSAG 343
Score = 116 bits (248), Expect(2) = 9e-031
Identities = 53/64 (82%), Positives = 55/64 (85%)
Frame = -2 / -2
Query: 342 PEEEPTACAFLYLSIVAFTLLLAYS*RRPRLEKTTSATSASQRTESSYAFLRSPLRRLQK 163
P E + AFLYLS+VA TLLL YS*RRPRLEKTTSATSASQ TESSYAF RSPLRRLQK
Sbjct: 342 PALEVSLVAFLYLSMVALTLLLEYS*RRPRLEKTTSATSASQSTESSYAFFRSPLRRLQK 163
Query: 162 VTCR 151
VTCR
Sbjct: 162 VTCR 151
Score = 111 bits (237), Expect(2) = 1e-024
Identities = 50/72 (69%), Positives = 56/72 (77%)
Frame = -1 / -1
Query: 319 CLLVPLDRSLHTVVGVLVEASAAGEDDERHLGVAEDGELVRLLEEPIAALAEGDLPARVV 140
CLLV L+ L VVGVL+EA AAG+DDER L VAE ELVRLL+E +AALAEGDLP R V
Sbjct: 319 CLLVSLNGCLDAVVGVLIEAPAAGKDDERDLSVAEHRELVRLLQESVAALAEGDLPVRRV 140
Query: 139 LDPLDLNPSPPH 104
LD LDL+P PH
Sbjct: 139 LDALDLDPPSPH 104
Score = 99.6 bits (211), Expect(2) = 1e-064
Identities = 42/63 (66%), Positives = 53/63 (84%)
Frame = +2 / +2
Query: 371 QFYQQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKGISKIRARKSELLA 550
Q YQQESAKLR QI LQN+NR L+GD++ +S ++LKQLE RL+KG+ KIRARK+ELL+
Sbjct: 365 QHYQQESAKLRQQITTLQNSNRTLIGDTMATMSHRDLKQLEGRLDKGLGKIRARKNELLS 544
Query: 551 AEI 559
AEI
Sbjct: 545 AEI 553
Score = 37.7 bits (76), Expect(2) = 9e-031
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = -2 / -2
Query: 450 SPTKCLLVFCSIWIWLRSFADSCW* 376
SP + LL FC + I SFADSCW*
Sbjct: 444 SPIRVLLEFCKVVICCLSFADSCW* 370
Score = 22.1 bits (42), Expect(2) = 1e-024
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = -1 / -1
Query: 460 SHRVTNQVPVSVLQHLDLVAQFCGF 386
SH + PV VLQ L+ Q C F
Sbjct: 454 SHGIAY*SPVGVLQGGYLLPQLCRF 380
>gb|CA025534.1|CA025534 HZ52G24r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ52G24
5-PRIME, mRNA sequence
Length = 542
Score = 167 bits (360), Expect(2) = 1e-064
Identities = 73/85 (85%), Positives = 77/85 (90%)
Frame = +2 / +2
Query: 89 AEISSMGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLY 268
A MGRGRIEIKRIEN T+RQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLY
Sbjct: 77 AAAEKMGRGRIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLY 256
Query: 269 EYANNSVKATIERYKKAHAVGSSSG 343
EY+NNSVKATIERYKKA + SS+G
Sbjct: 257 EYSNNSVKATIERYKKATSDTSSAG 331
Score = 116 bits (248), Expect(2) = 9e-031
Identities = 53/64 (82%), Positives = 55/64 (85%)
Frame = -2 / -3
Query: 342 PEEEPTACAFLYLSIVAFTLLLAYS*RRPRLEKTTSATSASQRTESSYAFLRSPLRRLQK 163
P E + AFLYLS+VA TLLL YS*RRPRLEKTTSATSASQ TESSYAF RSPLRRLQK
Sbjct: 330 PALEVSLVAFLYLSMVALTLLLEYS*RRPRLEKTTSATSASQSTESSYAFFRSPLRRLQK 151
Query: 162 VTCR 151
VTCR
Sbjct: 150 VTCR 139
Score = 111 bits (237), Expect(2) = 1e-024
Identities = 50/72 (69%), Positives = 56/72 (77%)
Frame = -1 / -2
Query: 319 CLLVPLDRSLHTVVGVLVEASAAGEDDERHLGVAEDGELVRLLEEPIAALAEGDLPARVV 140
CLLV L+ L VVGVL+EA AAG+DDER L VAE ELVRLL+E +AALAEGDLP R V
Sbjct: 307 CLLVSLNGCLDAVVGVLIEAPAAGKDDERDLSVAEHRELVRLLQESVAALAEGDLPVRRV 128
Query: 139 LDPLDLNPSPPH 104
LD LDL+P PH
Sbjct: 127 LDALDLDPPSPH 92
Score = 99.6 bits (211), Expect(2) = 1e-064
Identities = 42/63 (66%), Positives = 53/63 (84%)
Frame = +2 / +2
Query: 371 QFYQQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKGISKIRARKSELLA 550
Q YQQESAKLR QI LQN+NR L+GD++ +S ++LKQLE RL+KG+ KIRARK+ELL+
Sbjct: 353 QHYQQESAKLRQQITTLQNSNRTLIGDTMATMSHRDLKQLEGRLDKGLGKIRARKNELLS 532
Query: 551 AEI 559
AEI
Sbjct: 533 AEI 541
Score = 37.7 bits (76), Expect(2) = 9e-031
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = -2 / -3
Query: 450 SPTKCLLVFCSIWIWLRSFADSCW* 376
SP + LL FC + I SFADSCW*
Sbjct: 432 SPIRVLLEFCKVVICCLSFADSCW* 358
Score = 22.1 bits (42), Expect(2) = 1e-024
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = -1 / -2
Query: 460 SHRVTNQVPVSVLQHLDLVAQFCGF 386
SH + PV VLQ L+ Q C F
Sbjct: 442 SHGIAY*SPVGVLQGGYLLPQLCRF 368
>gb|BI948755.1|BI948755 HVSMEl0010L12f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0010L12f, mRNA sequence
Length = 854
Score = 164 bits (352), Expect(3) = 8e-064
Identities = 71/85 (83%), Positives = 76/85 (89%)
Frame = +2 / +3
Query: 89 AEISSMGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLY 268
A MGRGRIEI R+EN T+RQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLY
Sbjct: 123 AAAEKMGRGRIEIGRVENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLY 302
Query: 269 EYANNSVKATIERYKKAHAVGSSSG 343
EY+NNSVKATIERYKKA + SS+G
Sbjct: 303 EYSNNSVKATIERYKKATSDTSSAG 377
Score = 116 bits (248), Expect(3) = 5e-032
Identities = 53/64 (82%), Positives = 55/64 (85%)
Frame = -2 / -2
Query: 342 PEEEPTACAFLYLSIVAFTLLLAYS*RRPRLEKTTSATSASQRTESSYAFLRSPLRRLQK 163
P E + AFLYLS+VA TLLL YS*RRPRLEKTTSATSASQ TESSYAF RSPLRRLQK
Sbjct: 376 PALEVSLVAFLYLSMVALTLLLEYS*RRPRLEKTTSATSASQSTESSYAFFRSPLRRLQK 197
Query: 162 VTCR 151
VTCR
Sbjct: 196 VTCR 185
Score = 105 bits (223), Expect(2) = 1e-022
Identities = 48/72 (66%), Positives = 54/72 (75%)
Frame = -1 / -1
Query: 319 CLLVPLDRSLHTVVGVLVEASAAGEDDERHLGVAEDGELVRLLEEPIAALAEGDLPARVV 140
CLLV L+ L VVGVL+EA AAG+DDER L VAE ELVRLL+E +AALAEGDLP R V
Sbjct: 353 CLLVSLNGCLDAVVGVLIEAPAAGKDDERDLSVAEHRELVRLLQESVAALAEGDLPVRRV 174
Query: 139 LDPLDLNPSPPH 104
L DL+P PH
Sbjct: 173 LHAPDLDPPSPH 138
Score = 79.9 bits (168), Expect(3) = 8e-064
Identities = 34/56 (60%), Positives = 45/56 (80%)
Frame = +2 / +3
Query: 371 QFYQQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKGISKIRARKS 538
Q YQQESAKLR QI LQN+NR L+GD++ +S ++LKQLE RL+KG+ KI AR++
Sbjct: 399 QHYQQESAKLRQQITTLQNSNRTLIGDTMATMSHRDLKQLEGRLDKGL*KIIAREN 566
Score = 39.6 bits (80), Expect(3) = 8e-064
Identities = 16/36 (44%), Positives = 25/36 (69%)
Frame = +2 / +2
Query: 527 ARKSELLAAEINYMAKRETELQNDHMNLRTKIEEGE 634
+++ +L+AEI YM +RE LQN++ LR K+ E E
Sbjct: 554 SKREWILSAEIEYMQRRERGLQNNNFYLREKVAETE 661
Score = 37.7 bits (76), Expect(3) = 5e-032
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = -2 / -2
Query: 450 SPTKCLLVFCSIWIWLRSFADSCW* 376
SP + LL FC + I SFADSCW*
Sbjct: 478 SPIRVLLEFCKVVICCLSFADSCW* 404
Score = 22.1 bits (42), Expect(2) = 1e-022
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = -1 / -1
Query: 460 SHRVTNQVPVSVLQHLDLVAQFCGF 386
SH + PV VLQ L+ Q C F
Sbjct: 488 SHGIAY*SPVGVLQGGYLLPQLCRF 414
Score = 22.1 bits (42), Expect(3) = 5e-032
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = -1 / -2
Query: 613 PEVHVVILKLSLPFGHVIDLGS 548
P+V VVIL+ P HV++ +
Sbjct: 640 PQVKVVILQPPFPSLHVLNFSA 575
>gb|CA026169.1|CA026169 HZ55C06r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ55C06
5-PRIME, mRNA sequence
Length = 505
Score = 135 bits (289), Expect(2) = 1e-063
Identities = 58/68 (85%), Positives = 63/68 (92%)
Frame = +2 / +1
Query: 140 NNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYANNSVKATIERYKKA 319
+ +RQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEY+NNSVKATIERYKKA
Sbjct: 4 HEANRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYSNNSVKATIERYKKA 183
Query: 320 HAVGSSSG 343
+ SS+G
Sbjct: 184 TSDTSSAG 207
Score = 129 bits (276), Expect(2) = 1e-063
Identities = 55/88 (62%), Positives = 70/88 (79%)
Frame = +2 / +1
Query: 371 QFYQQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKGISKIRARKSELLA 550
Q YQQESAKLR QI LQN+NR L+GD++ +S ++LKQLE RL+KG+ KIRARK+ELL+
Sbjct: 229 QHYQQESAKLRQQITTLQNSNRTLIGDTMATMSHRDLKQLEGRLDKGLGKIRARKNELLS 408
Query: 551 AEINYMAKRETELQNDHMNLRTKIEEGE 634
AEI YM +RE ELQN++ LR K+ E E
Sbjct: 409 AEIEYMQRREMELQNNNFYLREKVAETE 492
Score = 116 bits (248), Expect(3) = 4e-033
Identities = 53/64 (82%), Positives = 55/64 (85%)
Frame = -2 / -3
Query: 342 PEEEPTACAFLYLSIVAFTLLLAYS*RRPRLEKTTSATSASQRTESSYAFLRSPLRRLQK 163
P E + AFLYLS+VA TLLL YS*RRPRLEKTTSATSASQ TESSYAF RSPLRRLQK
Sbjct: 206 PALEVSLVAFLYLSMVALTLLLEYS*RRPRLEKTTSATSASQSTESSYAFFRSPLRRLQK 27
Query: 162 VTCR 151
VTCR
Sbjct: 26 VTCR 15
Score = 37.7 bits (76), Expect(3) = 4e-033
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = -2 / -3
Query: 450 SPTKCLLVFCSIWIWLRSFADSCW* 376
SP + LL FC + I SFADSCW*
Sbjct: 308 SPIRVLLEFCKVVICCLSFADSCW* 234
Score = 25.8 bits (50), Expect(3) = 4e-033
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = -1 / -2
Query: 613 PEVHVVILKLSLPFGHVIDLGS 548
P+V VVIL+L P HV++ +
Sbjct: 471 PQVEVVILQLHFPSLHVLNFSA 406
>gb|BI948062.1|BI948062 HVSMEl0008A23f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0008A23f, mRNA sequence
Length = 825
Score = 155 bits (334), Expect(2) = 3e-063
Identities = 69/85 (81%), Positives = 74/85 (87%)
Frame = +2 / +2
Query: 89 AEISSMGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLY 268
A MGRGRIEIKRI +RQVTFC+RRNGLLKKAYELSVLCDAEVALVVFSSRGRLY
Sbjct: 98 AAAEKMGRGRIEIKRIGGAGNRQVTFCERRNGLLKKAYELSVLCDAEVALVVFSSRGRLY 277
Query: 269 EYANNSVKATIERYKKAHAVGSSSG 343
EY+NNSVKATIERYKKA + SS+G
Sbjct: 278 EYSNNSVKATIERYKKATSDTSSAG 352
Score = 113 bits (242), Expect(2) = 6e-030
Identities = 52/64 (81%), Positives = 54/64 (84%)
Frame = -2 / -1
Query: 342 PEEEPTACAFLYLSIVAFTLLLAYS*RRPRLEKTTSATSASQRTESSYAFLRSPLRRLQK 163
P E + AFLYLS+VA TLLL YS*RRPRLEKTTSATSASQ TESSYAF RSPLRR QK
Sbjct: 351 PALEVSLVAFLYLSMVALTLLLEYS*RRPRLEKTTSATSASQSTESSYAFFRSPLRRSQK 172
Query: 162 VTCR 151
VTCR
Sbjct: 171 VTCR 160
Score = 106 bits (227), Expect(2) = 3e-063
Identities = 45/70 (64%), Positives = 57/70 (81%)
Frame = +2 / +2
Query: 371 QFYQQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKGISKIRARKSELLA 550
Q YQQESAKLR QI LQN+NR L+GD++ +S ++LKQLE RL+KG+ KIRARK+ELL+
Sbjct: 374 QHYQQESAKLRQQITTLQNSNRTLIGDTMATMSHRDLKQLEGRLDKGLGKIRARKNELLS 553
Query: 551 AEINYMAKRE 580
AEI YM + E
Sbjct: 554 AEIEYMQRGE 583
Score = 102 bits (217), Expect(2) = 6e-022
Identities = 47/72 (65%), Positives = 53/72 (73%)
Frame = -1 / -3
Query: 319 CLLVPLDRSLHTVVGVLVEASAAGEDDERHLGVAEDGELVRLLEEPIAALAEGDLPARVV 140
CLLV L+ L VVGVL+EA AAG+DDER L VAE ELVRLL+E +AALAEGDLP
Sbjct: 328 CLLVSLNGCLDAVVGVLIEAPAAGKDDERDLSVAEHRELVRLLQESVAALAEGDLPVPRP 149
Query: 139 LDPLDLNPSPPH 104
D LDL+P PH
Sbjct: 148 PDALDLDPPSPH 113
Score = 37.7 bits (76), Expect(2) = 6e-030
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = -2 / -1
Query: 450 SPTKCLLVFCSIWIWLRSFADSCW* 376
SP + LL FC + I SFADSCW*
Sbjct: 453 SPIRVLLEFCKVVICCLSFADSCW* 379
Score = 22.1 bits (42), Expect(2) = 6e-022
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = -1 / -3
Query: 460 SHRVTNQVPVSVLQHLDLVAQFCGF 386
SH + PV VLQ L+ Q C F
Sbjct: 463 SHGIAY*SPVGVLQGGYLLPQLCRF 389
>gb|BE454527.3|BE454527 HVSMEh0094C05f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0094C05f, mRNA sequence
Length = 916
Score = 167 bits (360), Expect(2) = 5e-063
Identities = 73/85 (85%), Positives = 77/85 (90%)
Frame = +2 / +1
Query: 89 AEISSMGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLY 268
A MGRGRIEIKRIEN T+RQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLY
Sbjct: 76 AAAEKMGRGRIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLY 255
Query: 269 EYANNSVKATIERYKKAHAVGSSSG 343
EY+NNSVKATIERYKKA + SS+G
Sbjct: 256 EYSNNSVKATIERYKKATSDTSSAG 330
Score = 116 bits (248), Expect(2) = 9e-031
Identities = 53/64 (82%), Positives = 55/64 (85%)
Frame = -2 / -3
Query: 342 PEEEPTACAFLYLSIVAFTLLLAYS*RRPRLEKTTSATSASQRTESSYAFLRSPLRRLQK 163
P E + AFLYLS+VA TLLL YS*RRPRLEKTTSATSASQ TESSYAF RSPLRRLQK
Sbjct: 329 PALEVSLVAFLYLSMVALTLLLEYS*RRPRLEKTTSATSASQSTESSYAFFRSPLRRLQK 150
Query: 162 VTCR 151
VTCR
Sbjct: 149 VTCR 138
Score = 111 bits (237), Expect(2) = 1e-024
Identities = 50/72 (69%), Positives = 56/72 (77%)
Frame = -1 / -2
Query: 319 CLLVPLDRSLHTVVGVLVEASAAGEDDERHLGVAEDGELVRLLEEPIAALAEGDLPARVV 140
CLLV L+ L VVGVL+EA AAG+DDER L VAE ELVRLL+E +AALAEGDLP R V
Sbjct: 306 CLLVSLNGCLDAVVGVLIEAPAAGKDDERDLSVAEHRELVRLLQESVAALAEGDLPVRRV 127
Query: 139 LDPLDLNPSPPH 104
LD LDL+P PH
Sbjct: 126 LDALDLDPPSPH 91
Score = 94.5 bits (200), Expect(2) = 5e-063
Identities = 40/68 (58%), Positives = 52/68 (76%)
Frame = +2 / +1
Query: 371 QFYQQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKGISKIRARKSELLA 550
Q YQQESAKLR QI LQN+NR L+GD++ +S ++L QLE RL+ G+ KI A K+ELL+
Sbjct: 352 QHYQQESAKLRQQITTLQNSNRTLIGDTMATMSHRDLXQLEGRLDXGLXKIXAXKNELLS 531
Query: 551 AEINYMAK 574
AEI YM +
Sbjct: 532 AEIEYMQR 555
Score = 37.7 bits (76), Expect(2) = 9e-031
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = -2 / -3
Query: 450 SPTKCLLVFCSIWIWLRSFADSCW* 376
SP + LL FC + I SFADSCW*
Sbjct: 431 SPIRVLLEFCKVVICCLSFADSCW* 357
Score = 22.1 bits (42), Expect(2) = 1e-024
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = -1 / -2
Query: 460 SHRVTNQVPVSVLQHLDLVAQFCGF 386
SH + PV VLQ L+ Q C F
Sbjct: 441 SHGIAY*SPVGVLQGGYLLPQLCRF 367
>gb|BU995356.1|BU995356 HM09P23r HM Hordeum vulgare subsp. vulgare cDNA clone HM09P23
5-PRIME, mRNA sequence
Length = 628
Score = 168 bits (361), Expect(2) = 9e-063
Identities = 72/80 (90%), Positives = 77/80 (96%)
Frame = +2 / +1
Query: 104 MGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYANN 283
MGRGRIEIKRIEN T+RQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEY+NN
Sbjct: 145 MGRGRIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYSNN 324
Query: 284 SVKATIERYKKAHAVGSSSG 343
SVKATIERYKKA++ S+SG
Sbjct: 325 SVKATIERYKKANSDTSNSG 384
Score = 116 bits (247), Expect(2) = 7e-028
Identities = 52/64 (81%), Positives = 55/64 (85%)
Frame = -2 / -3
Query: 342 PEEEPTACAFLYLSIVAFTLLLAYS*RRPRLEKTTSATSASQRTESSYAFLRSPLRRLQK 163
PE + + AFLYLS+VAFTLL YS*RRPRLEKTT ATSASQ TESSYAFLR PLRRLQK
Sbjct: 383 PELDVSLLAFLYLSMVAFTLLFEYS*RRPRLEKTTRATSASQSTESSYAFLRRPLRRLQK 204
Query: 162 VTCR 151
VTCR
Sbjct: 203 VTCR 192
Score = 113 bits (242), Expect = 2e-024
Identities = 52/73 (71%), Positives = 57/73 (78%)
Frame = -1 / -2
Query: 322 VCLLVPLDRSLHTVVGVLVEASAAGEDDERHLGVAEDGELVRLLEEPIAALAEGDLPARV 143
V L VPL+ HTVV VLVEA+AAGEDDE LGV E ELVRLLEE +AALAEGDLP
Sbjct: 363 VGLFVPLNGGFHTVV*VLVEAAAAGEDDEGDLGVTEHRELVRLLEEAVAALAEGDLPVGG 184
Query: 142 VLDPLDLNPSPPH 104
VLD LDL+P+PPH
Sbjct: 183 VLDALDLDPAPPH 145
Score = 93.2 bits (197), Expect(2) = 9e-063
Identities = 42/86 (48%), Positives = 59/86 (68%)
Frame = +2 / +1
Query: 332 SSSGPPLLEHNAQQFYQQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKG 511
+S+ + E NAQ + Q+ S + + + +R LV DSV ++L++LKQLE RLEKG
Sbjct: 370 TSNSGTVAEVNAQYYQQESSKLRQQISSLQNSNSRSLVRDSVSTMTLRDLKQLEGRLEKG 549
Query: 512 ISKIRARKSELLAAEINYMAKRETEL 589
I+KIRARK+EL+ AE+ YM KRE EL
Sbjct: 550 IAKIRARKNELMYAEVEYMQKREMEL 627
Score = 28.6 bits (56), Expect(2) = 7e-028
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = -2 / -3
Query: 435 LLVFCSIWIWLRSFADSCW* 376
L FC + I RS DSCW*
Sbjct: 470 LFEFCKLLICWRSLEDSCW* 411
>gb|BU973813.1|BU973813 HB26A20r BC Hordeum vulgare subsp. vulgare cDNA clone HB26A20
5-PRIME, mRNA sequence
Length = 554
Score = 167 bits (360), Expect(2) = 7e-061
Identities = 73/85 (85%), Positives = 77/85 (90%)
Frame = +2 / +2
Query: 89 AEISSMGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLY 268
A MGRGRIEIKRIEN T+RQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLY
Sbjct: 110 AAAEKMGRGRIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLY 289
Query: 269 EYANNSVKATIERYKKAHAVGSSSG 343
EY+NNSVKATIERYKKA + SS+G
Sbjct: 290 EYSNNSVKATIERYKKATSDTSSAG 364
Score = 116 bits (248), Expect(2) = 9e-031
Identities = 53/64 (82%), Positives = 55/64 (85%)
Frame = -2 / -3
Query: 342 PEEEPTACAFLYLSIVAFTLLLAYS*RRPRLEKTTSATSASQRTESSYAFLRSPLRRLQK 163
P E + AFLYLS+VA TLLL YS*RRPRLEKTTSATSASQ TESSYAF RSPLRRLQK
Sbjct: 363 PALEVSLVAFLYLSMVALTLLLEYS*RRPRLEKTTSATSASQSTESSYAFFRSPLRRLQK 184
Query: 162 VTCR 151
VTCR
Sbjct: 183 VTCR 172
Score = 111 bits (237), Expect(2) = 1e-024
Identities = 50/72 (69%), Positives = 56/72 (77%)
Frame = -1 / -2
Query: 319 CLLVPLDRSLHTVVGVLVEASAAGEDDERHLGVAEDGELVRLLEEPIAALAEGDLPARVV 140
CLLV L+ L VVGVL+EA AAG+DDER L VAE ELVRLL+E +AALAEGDLP R V
Sbjct: 340 CLLVSLNGCLDAVVGVLIEAPAAGKDDERDLSVAEHRELVRLLQESVAALAEGDLPVRRV 161
Query: 139 LDPLDLNPSPPH 104
LD LDL+P PH
Sbjct: 160 LDALDLDPPSPH 125
Score = 87.2 bits (184), Expect(2) = 7e-061
Identities = 36/56 (64%), Positives = 46/56 (82%)
Frame = +2 / +2
Query: 371 QFYQQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKGISKIRARKS 538
Q YQQESAKLR QI LQN+NR L+GD++ +S ++LKQLE RL+KG+ KIRARK+
Sbjct: 386 QHYQQESAKLRQQITTLQNSNRTLIGDTMATMSHRDLKQLEGRLDKGLGKIRARKN 553
Score = 37.7 bits (76), Expect(2) = 9e-031
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = -2 / -3
Query: 450 SPTKCLLVFCSIWIWLRSFADSCW* 376
SP + LL FC + I SFADSCW*
Sbjct: 465 SPIRVLLEFCKVVICCLSFADSCW* 391
Score = 22.1 bits (42), Expect(2) = 1e-024
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = -1 / -2
Query: 460 SHRVTNQVPVSVLQHLDLVAQFCGF 386
SH + PV VLQ L+ Q C F
Sbjct: 475 SHGIAY*SPVGVLQGGYLLPQLCRF 401
>gb|AL506894.1|AL506894 AL506894 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY04I23T 5',
mRNA sequence
Length = 700
Score = 167 bits (360), Expect(2) = 1e-060
Identities = 73/85 (85%), Positives = 77/85 (90%)
Frame = +2 / +2
Query: 89 AEISSMGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLY 268
A MGRGRIEIKRIEN T+RQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLY
Sbjct: 173 AAAEKMGRGRIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLY 352
Query: 269 EYANNSVKATIERYKKAHAVGSSSG 343
EY+NNSVKATIERYKKA + SS+G
Sbjct: 353 EYSNNSVKATIERYKKATSDTSSAG 427
Score = 116 bits (248), Expect(3) = 5e-032
Identities = 53/64 (82%), Positives = 55/64 (85%)
Frame = -2 / -2
Query: 342 PEEEPTACAFLYLSIVAFTLLLAYS*RRPRLEKTTSATSASQRTESSYAFLRSPLRRLQK 163
P E + AFLYLS+VA TLLL YS*RRPRLEKTTSATSASQ TESSYAF RSPLRRLQK
Sbjct: 426 PALEVSLVAFLYLSMVALTLLLEYS*RRPRLEKTTSATSASQSTESSYAFFRSPLRRLQK 247
Query: 162 VTCR 151
VTCR
Sbjct: 246 VTCR 235
Score = 111 bits (237), Expect(2) = 1e-024
Identities = 50/72 (69%), Positives = 56/72 (77%)
Frame = -1 / -1
Query: 319 CLLVPLDRSLHTVVGVLVEASAAGEDDERHLGVAEDGELVRLLEEPIAALAEGDLPARVV 140
CLLV L+ L VVGVL+EA AAG+DDER L VAE ELVRLL+E +AALAEGDLP R V
Sbjct: 403 CLLVSLNGCLDAVVGVLIEAPAAGKDDERDLSVAEHRELVRLLQESVAALAEGDLPVRRV 224
Query: 139 LDPLDLNPSPPH 104
LD LDL+P PH
Sbjct: 223 LDALDLDPPSPH 188
Score = 86.8 bits (183), Expect(2) = 1e-060
Identities = 36/55 (65%), Positives = 45/55 (81%)
Frame = +2 / +2
Query: 371 QFYQQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKGISKIRARK 535
Q YQQESAKLR QI LQN+NR L+GD++ +S ++LKQLE RL+KG+ KIRARK
Sbjct: 449 QHYQQESAKLRQQITTLQNSNRTLIGDTMATMSHRDLKQLEGRLDKGLGKIRARK 613
Score = 37.7 bits (76), Expect(3) = 5e-032
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = -2 / -2
Query: 450 SPTKCLLVFCSIWIWLRSFADSCW* 376
SP + LL FC + I SFADSCW*
Sbjct: 528 SPIRVLLEFCKVVICCLSFADSCW* 454
Score = 22.1 bits (42), Expect(2) = 1e-024
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = -1 / -1
Query: 460 SHRVTNQVPVSVLQHLDLVAQFCGF 386
SH + PV VLQ L+ Q C F
Sbjct: 538 SHGIAY*SPVGVLQGGYLLPQLCRF 464
Score = 22.1 bits (42), Expect(3) = 5e-032
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = -1 / -3
Query: 610 EVHVVILKLSLPFGHVIDLGS 548
+V VVIL+L P HV++ +
Sbjct: 689 KVEVVILQLHFPSLHVLNFSA 627
>gb|AL508019.1|AL508019 AL508019 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY07I15V 5',
mRNA sequence
Length = 700
Score = 167 bits (360), Expect(2) = 3e-060
Identities = 73/85 (85%), Positives = 77/85 (90%)
Frame = +2 / +1
Query: 89 AEISSMGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLY 268
A MGRGRIEIKRIEN T+RQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLY
Sbjct: 121 AAAEKMGRGRIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLY 300
Query: 269 EYANNSVKATIERYKKAHAVGSSSG 343
EY+NNSVKATIERYKKA + SS+G
Sbjct: 301 EYSNNSVKATIERYKKATSDTSSAG 375
Score = 116 bits (248), Expect(2) = 9e-031
Identities = 53/64 (82%), Positives = 55/64 (85%)
Frame = -2 / -3
Query: 342 PEEEPTACAFLYLSIVAFTLLLAYS*RRPRLEKTTSATSASQRTESSYAFLRSPLRRLQK 163
P E + AFLYLS+VA TLLL YS*RRPRLEKTTSATSASQ TESSYAF RSPLRRLQK
Sbjct: 374 PALEVSLVAFLYLSMVALTLLLEYS*RRPRLEKTTSATSASQSTESSYAFFRSPLRRLQK 195
Query: 162 VTCR 151
VTCR
Sbjct: 194 VTCR 183
Score = 111 bits (237), Expect(2) = 1e-024
Identities = 50/72 (69%), Positives = 56/72 (77%)
Frame = -1 / -2
Query: 319 CLLVPLDRSLHTVVGVLVEASAAGEDDERHLGVAEDGELVRLLEEPIAALAEGDLPARVV 140
CLLV L+ L VVGVL+EA AAG+DDER L VAE ELVRLL+E +AALAEGDLP R V
Sbjct: 351 CLLVSLNGCLDAVVGVLIEAPAAGKDDERDLSVAEHRELVRLLQESVAALAEGDLPVRRV 172
Query: 139 LDPLDLNPSPPH 104
LD LDL+P PH
Sbjct: 171 LDALDLDPPSPH 136
Score = 85.4 bits (180), Expect(2) = 3e-060
Identities = 35/55 (63%), Positives = 45/55 (81%)
Frame = +2 / +1
Query: 371 QFYQQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKGISKIRARK 535
Q YQQESAKLR QI LQN+NR L+GD++ +S ++LKQLE RL+KG+ KIRA+K
Sbjct: 397 QHYQQESAKLRQQITTLQNSNRTLIGDTMATMSHRDLKQLEGRLDKGLGKIRAKK 561
Score = 37.7 bits (76), Expect(2) = 9e-031
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = -2 / -3
Query: 450 SPTKCLLVFCSIWIWLRSFADSCW* 376
SP + LL FC + I SFADSCW*
Sbjct: 476 SPIRVLLEFCKVVICCLSFADSCW* 402
Score = 22.1 bits (42), Expect(2) = 1e-024
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = -1 / -2
Query: 460 SHRVTNQVPVSVLQHLDLVAQFCGF 386
SH + PV VLQ L+ Q C F
Sbjct: 486 SHGIAY*SPVGVLQGGYLLPQLCRF 412
>gb|AL507763.1|AL507763 AL507763 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY06M13V 5',
mRNA sequence
Length = 700
Score = 167 bits (360), Expect(3) = 3e-058
Identities = 73/85 (85%), Positives = 77/85 (90%)
Frame = +2 / +1
Query: 89 AEISSMGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLY 268
A MGRGRIEIKRIEN T+RQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLY
Sbjct: 193 AAAEKMGRGRIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLY 372
Query: 269 EYANNSVKATIERYKKAHAVGSSSG 343
EY+NNSVKATIERYKKA + SS+G
Sbjct: 373 EYSNNSVKATIERYKKATSDTSSAG 447
Score = 116 bits (248), Expect(2) = 9e-031
Identities = 53/64 (82%), Positives = 55/64 (85%)
Frame = -2 / -3
Query: 342 PEEEPTACAFLYLSIVAFTLLLAYS*RRPRLEKTTSATSASQRTESSYAFLRSPLRRLQK 163
P E + AFLYLS+VA TLLL YS*RRPRLEKTTSATSASQ TESSYAF RSPLRRLQK
Sbjct: 446 PALEVSLVAFLYLSMVALTLLLEYS*RRPRLEKTTSATSASQSTESSYAFFRSPLRRLQK 267
Query: 162 VTCR 151
VTCR
Sbjct: 266 VTCR 255
Score = 111 bits (237), Expect(2) = 1e-024
Identities = 50/72 (69%), Positives = 56/72 (77%)
Frame = -1 / -2
Query: 319 CLLVPLDRSLHTVVGVLVEASAAGEDDERHLGVAEDGELVRLLEEPIAALAEGDLPARVV 140
CLLV L+ L VVGVL+EA AAG+DDER L VAE ELVRLL+E +AALAEGDLP R V
Sbjct: 423 CLLVSLNGCLDAVVGVLIEAPAAGKDDERDLSVAEHRELVRLLQESVAALAEGDLPVRRV 244
Query: 139 LDPLDLNPSPPH 104
LD LDL+P PH
Sbjct: 243 LDALDLDPPSPH 208
Score = 63.8 bits (133), Expect(3) = 3e-058
Identities = 26/43 (60%), Positives = 34/43 (79%)
Frame = +2 / +1
Query: 371 QFYQQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESR 499
Q YQQESAKLR QI LQN+NR L+GD++ +S ++LKQLE +
Sbjct: 469 QHYQQESAKLRQQITTLQNSNRTLIGDTMATMSHRDLKQLEGK 597
Score = 37.7 bits (76), Expect(2) = 9e-031
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = -2 / -3
Query: 450 SPTKCLLVFCSIWIWLRSFADSCW* 376
SP + LL FC + I SFADSCW*
Sbjct: 548 SPIRVLLEFCKVVICCLSFADSCW* 474
Score = 33.1 bits (66), Expect(3) = 3e-058
Identities = 13/17 (76%), Positives = 16/17 (94%)
Frame = +2 / +2
Query: 497 RLEKGISKIRARKSELL 547
RL+KG+ KIRARK+ELL
Sbjct: 596 RLDKGLGKIRARKNELL 646
Score = 22.1 bits (42), Expect(2) = 1e-024
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = -1 / -2
Query: 460 SHRVTNQVPVSVLQHLDLVAQFCGF 386
SH + PV VLQ L+ Q C F
Sbjct: 558 SHGIAY*SPVGVLQGGYLLPQLCRF 484
>gb|BQ462735.1|BQ462735 HI01N16T HI Hordeum vulgare subsp. vulgare cDNA clone HI01N16
5-PRIME, mRNA sequence
Length = 547
Score = 167 bits (360), Expect(2) = 1e-056
Identities = 73/85 (85%), Positives = 77/85 (90%)
Frame = +2 / +1
Query: 89 AEISSMGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLY 268
A MGRGRIEIKRIEN T+RQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLY
Sbjct: 130 AAAEKMGRGRIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLY 309
Query: 269 EYANNSVKATIERYKKAHAVGSSSG 343
EY+NNSVKATIERYKKA + SS+G
Sbjct: 310 EYSNNSVKATIERYKKATSDTSSAG 384
Score = 116 bits (248), Expect(2) = 9e-031
Identities = 53/64 (82%), Positives = 55/64 (85%)
Frame = -2 / -3
Query: 342 PEEEPTACAFLYLSIVAFTLLLAYS*RRPRLEKTTSATSASQRTESSYAFLRSPLRRLQK 163
P E + AFLYLS+VA TLLL YS*RRPRLEKTTSATSASQ TESSYAF RSPLRRLQK
Sbjct: 383 PALEVSLVAFLYLSMVALTLLLEYS*RRPRLEKTTSATSASQSTESSYAFFRSPLRRLQK 204
Query: 162 VTCR 151
VTCR
Sbjct: 203 VTCR 192
Score = 111 bits (237), Expect(2) = 1e-024
Identities = 50/72 (69%), Positives = 56/72 (77%)
Frame = -1 / -2
Query: 319 CLLVPLDRSLHTVVGVLVEASAAGEDDERHLGVAEDGELVRLLEEPIAALAEGDLPARVV 140
CLLV L+ L VVGVL+EA AAG+DDER L VAE ELVRLL+E +AALAEGDLP R V
Sbjct: 360 CLLVSLNGCLDAVVGVLIEAPAAGKDDERDLSVAEHRELVRLLQESVAALAEGDLPVRRV 181
Query: 139 LDPLDLNPSPPH 104
LD LDL+P PH
Sbjct: 180 LDALDLDPPSPH 145
Score = 73.0 bits (153), Expect(2) = 1e-056
Identities = 30/47 (63%), Positives = 38/47 (80%)
Frame = +2 / +1
Query: 371 QFYQQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKG 511
Q YQQESAKLR QI LQN+NR L+GD++ +S ++LKQLE RL+KG
Sbjct: 406 QHYQQESAKLRQQITTLQNSNRTLIGDTMATMSHRDLKQLEGRLDKG 546
Score = 37.7 bits (76), Expect(2) = 9e-031
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = -2 / -3
Query: 450 SPTKCLLVFCSIWIWLRSFADSCW* 376
SP + LL FC + I SFADSCW*
Sbjct: 485 SPIRVLLEFCKVVICCLSFADSCW* 411
Score = 22.1 bits (42), Expect(2) = 1e-024
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = -1 / -2
Query: 460 SHRVTNQVPVSVLQHLDLVAQFCGF 386
SH + PV VLQ L+ Q C F
Sbjct: 495 SHGIAY*SPVGVLQGGYLLPQLCRF 421
>gb|CA028663.1|CA028663 HZ62N08r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ62N08
5-PRIME, mRNA sequence
Length = 546
Score = 167 bits (360), Expect(2) = 1e-056
Identities = 73/85 (85%), Positives = 77/85 (90%)
Frame = +2 / +1
Query: 89 AEISSMGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLY 268
A MGRGRIEIKRIEN T+RQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLY
Sbjct: 130 AAAEKMGRGRIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLY 309
Query: 269 EYANNSVKATIERYKKAHAVGSSSG 343
EY+NNSVKATIERYKKA + SS+G
Sbjct: 310 EYSNNSVKATIERYKKATSDTSSAG 384
Score = 116 bits (248), Expect(2) = 9e-031
Identities = 53/64 (82%), Positives = 55/64 (85%)
Frame = -2 / -2
Query: 342 PEEEPTACAFLYLSIVAFTLLLAYS*RRPRLEKTTSATSASQRTESSYAFLRSPLRRLQK 163
P E + AFLYLS+VA TLLL YS*RRPRLEKTTSATSASQ TESSYAF RSPLRRLQK
Sbjct: 383 PALEVSLVAFLYLSMVALTLLLEYS*RRPRLEKTTSATSASQSTESSYAFFRSPLRRLQK 204
Query: 162 VTCR 151
VTCR
Sbjct: 203 VTCR 192
Score = 111 bits (237), Expect(2) = 1e-024
Identities = 50/72 (69%), Positives = 56/72 (77%)
Frame = -1 / -1
Query: 319 CLLVPLDRSLHTVVGVLVEASAAGEDDERHLGVAEDGELVRLLEEPIAALAEGDLPARVV 140
CLLV L+ L VVGVL+EA AAG+DDER L VAE ELVRLL+E +AALAEGDLP R V
Sbjct: 360 CLLVSLNGCLDAVVGVLIEAPAAGKDDERDLSVAEHRELVRLLQESVAALAEGDLPVRRV 181
Query: 139 LDPLDLNPSPPH 104
LD LDL+P PH
Sbjct: 180 LDALDLDPPSPH 145
Score = 73.0 bits (153), Expect(2) = 1e-056
Identities = 30/47 (63%), Positives = 38/47 (80%)
Frame = +2 / +1
Query: 371 QFYQQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKG 511
Q YQQESAKLR QI LQN+NR L+GD++ +S ++LKQLE RL+KG
Sbjct: 406 QHYQQESAKLRQQITTLQNSNRTLIGDTMATMSHRDLKQLEGRLDKG 546
Score = 37.7 bits (76), Expect(2) = 9e-031
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = -2 / -2
Query: 450 SPTKCLLVFCSIWIWLRSFADSCW* 376
SP + LL FC + I SFADSCW*
Sbjct: 485 SPIRVLLEFCKVVICCLSFADSCW* 411
Score = 22.1 bits (42), Expect(2) = 1e-024
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = -1 / -1
Query: 460 SHRVTNQVPVSVLQHLDLVAQFCGF 386
SH + PV VLQ L+ Q C F
Sbjct: 495 SHGIAY*SPVGVLQGGYLLPQLCRF 421
>gb|BF258470.2|BF258470 HVSMEf0015M23f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0015M23f, mRNA sequence
Length = 891
Score = 143 bits (306), Expect(2) = 5e-056
Identities = 58/72 (80%), Positives = 68/72 (94%)
Frame = +2 / +3
Query: 104 MGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYANN 283
MGRG+IEIKRIEN T+R+VTFC R NGLLKKAYELSVLCDAEVAL+ FSSRGRLYEY+NN
Sbjct: 198 MGRGKIEIKRIENTTNRKVTFC*RMNGLLKKAYELSVLCDAEVALIDFSSRGRLYEYSNN 377
Query: 284 SVKATIERYKKA 319
++++TI+RYKKA
Sbjct: 378 NIRSTIDRYKKA 413
Score = 95.9 bits (203), Expect(2) = 5e-056
Identities = 38/62 (61%), Positives = 55/62 (88%)
Frame = +2 / +3
Query: 374 FYQQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKGISKIRARKSELLAA 553
+YQQESAKL QIQMLQN+NRHL+GDS+ +L++KELK ++++LE+GI++IR++K +L A
Sbjct: 462 YYQQESAKLIQQIQMLQNSNRHLMGDSLSSLTVKELKHVDNKLERGITRIRSKKHYMLLA 641
Query: 554 EI 559
EI
Sbjct: 642 EI 647
>gb|BG344090.1|BG344090 HVSMEg0007K02f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0007K02f, mRNA sequence
Length = 832
Score = 154 bits (331), Expect(2) = 5e-056
Identities = 67/75 (89%), Positives = 71/75 (94%)
Frame = +2 / +3
Query: 119 IEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYANNSVKAT 298
IEIKRIEN T+RQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEY+NNSVKAT
Sbjct: 3 IEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYSNNSVKAT 182
Query: 299 IERYKKAHAVGSSSG 343
IERYKKA + SS+G
Sbjct: 183 IERYKKATSDTSSAG 227
Score = 116 bits (248), Expect(2) = 9e-031
Identities = 53/64 (82%), Positives = 55/64 (85%)
Frame = -2 / -1
Query: 342 PEEEPTACAFLYLSIVAFTLLLAYS*RRPRLEKTTSATSASQRTESSYAFLRSPLRRLQK 163
P E + AFLYLS+VA TLLL YS*RRPRLEKTTSATSASQ TESSYAF RSPLRRLQK
Sbjct: 226 PALEVSLVAFLYLSMVALTLLLEYS*RRPRLEKTTSATSASQSTESSYAFFRSPLRRLQK 47
Query: 162 VTCR 151
VTCR
Sbjct: 46 VTCR 35
Score = 102 bits (217), Expect(2) = 6e-022
Identities = 47/67 (70%), Positives = 53/67 (79%)
Frame = -1 / -3
Query: 319 CLLVPLDRSLHTVVGVLVEASAAGEDDERHLGVAEDGELVRLLEEPIAALAEGDLPARVV 140
CLLV L+ L VVGVL+EA AAG+DDER L VAE ELVRLL+E +AALAEGDLP R V
Sbjct: 203 CLLVSLNGCLDAVVGVLIEAPAAGKDDERDLSVAEHRELVRLLQESVAALAEGDLPVRRV 24
Query: 139 LDPLDLN 119
LD LDL+
Sbjct: 23 LDALDLD 3
Score = 84.5 bits (178), Expect(2) = 5e-056
Identities = 36/64 (56%), Positives = 48/64 (75%)
Frame = +2 / +3
Query: 371 QFYQQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKGISKIRARKSELLA 550
Q YQQESAKLR QI LQN+NR L+GD++ +S ++LKQLE +L+ G+ KIRARK E A
Sbjct: 249 QHYQQESAKLRQQITTLQNSNRTLIGDTMATMSHRDLKQLEGKLDXGLGKIRARKIEY*A 428
Query: 551 AEIN 562
++
Sbjct: 429 LNLS 440
Score = 37.7 bits (76), Expect(2) = 9e-031
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = -2 / -1
Query: 450 SPTKCLLVFCSIWIWLRSFADSCW* 376
SP + LL FC + I SFADSCW*
Sbjct: 328 SPIRVLLEFCKVVICCLSFADSCW* 254
Score = 22.1 bits (42), Expect(2) = 6e-022
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = -1 / -3
Query: 460 SHRVTNQVPVSVLQHLDLVAQFCGF 386
SH + PV VLQ L+ Q C F
Sbjct: 338 SHGIAY*SPVGVLQGGYLLPQLCRF 264
>gb|BG417142.1|BG417142 HVSMEk0016H10f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0016H10f, mRNA sequence
Length = 471
Score = 155 bits (333), Expect(2) = 6e-053
Identities = 68/85 (80%), Positives = 73/85 (85%)
Frame = +2 / +1
Query: 89 AEISSMGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLY 268
A MGRGRI+IKRIEN T+RQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLY
Sbjct: 52 AAAEKMGRGRIDIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLY 231
Query: 269 EYANNSVKATIERYKKAHAVGSSSG 343
EY+NNS ATIERYKK + S+G
Sbjct: 232 EYSNNSG*ATIERYKKGTSDTXSAG 306
Score = 107 bits (229), Expect(2) = 9e-028
Identities = 49/55 (89%), Positives = 50/55 (90%)
Frame = -2 / -2
Query: 315 FLYLSIVAFTLLLAYS*RRPRLEKTTSATSASQRTESSYAFLRSPLRRLQKVTCR 151
FLYLS+VA LLL YS*RRPRLEKTTSATSASQ TESSYAF RSPLRRLQKVTCR
Sbjct: 278 FLYLSMVA*PLLLEYS*RRPRLEKTTSATSASQSTESSYAFFRSPLRRLQKVTCR 114
Score = 105 bits (225), Expect = 3e-022
Identities = 48/71 (67%), Positives = 55/71 (77%)
Frame = -1 / -1
Query: 316 LLVPLDRSLHTVVGVLVEASAAGEDDERHLGVAEDGELVRLLEEPIAALAEGDLPARVVL 137
LLV L+ L VVGVL+EA AAG+DDER L VAE ELVRLL+E +AALAEGDLP R VL
Sbjct: 279 LLVSLNGCLTAVVGVLIEAPAAGKDDERDLSVAEHRELVRLLQESVAALAEGDLPVRRVL 100
Query: 136 DPLDLNPSPPH 104
D LD++P PH
Sbjct: 99 DALDIDPPSPH 67
Score = 73.0 bits (153), Expect(2) = 6e-053
Identities = 30/48 (62%), Positives = 39/48 (81%)
Frame = +2 / +1
Query: 371 QFYQQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKGI 514
Q YQQESAKLR QI LQN+NR L+GD++ +S ++LKQLE RL+KG+
Sbjct: 328 QHYQQESAKLRPQITTLQNSNRTLIGDTMATMSHRDLKQLEGRLDKGL 471
Score = 36.3 bits (73), Expect(2) = 9e-028
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = -2 / -2
Query: 450 SPTKCLLVFCSIWIWLRSFADSCW* 376
SP + LL FC + I SFADSCW*
Sbjct: 407 SPIRVLLEFCKVVICGLSFADSCW* 333
>gb|BU979781.1|BU979781 HA17E15r HA Hordeum vulgare subsp. vulgare cDNA clone HA17E15
5-PRIME, mRNA sequence
Length = 514
Score = 129 bits (276), Expect(2) = 1e-052
Identities = 55/88 (62%), Positives = 70/88 (79%)
Frame = +2 / +3
Query: 371 QFYQQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKGISKIRARKSELLA 550
Q YQQESAKLR QI LQN+NR L+GD++ +S ++LKQLE RL+KG+ KIRARK+ELL+
Sbjct: 180 QHYQQESAKLRQQITTLQNSNRTLIGDTMATMSHRDLKQLEGRLDKGLGKIRARKNELLS 359
Query: 551 AEINYMAKRETELQNDHMNLRTKIEEGE 634
AEI YM +RE ELQN++ LR K+ E E
Sbjct: 360 AEIEYMQRREMELQNNNFYLREKVAETE 443
Score = 98.2 bits (208), Expect(2) = 1e-052
Identities = 43/49 (87%), Positives = 46/49 (93%)
Frame = +2 / +3
Query: 197 AYELSVLCDAEVALVVFSSRGRLYEYANNSVKATIERYKKAHAVGSSSG 343
AYELSVLCDAEVALVVFSSRGRLYEY+NNSVKATIERYKKA + SS+G
Sbjct: 12 AYELSVLCDAEVALVVFSSRGRLYEYSNNSVKATIERYKKATSDTSSAG 158
Score = 83.1 bits (175), Expect(3) = 3e-023
Identities = 39/49 (79%), Positives = 41/49 (83%)
Frame = -2 / -1
Query: 342 PEEEPTACAFLYLSIVAFTLLLAYS*RRPRLEKTTSATSASQRTESSYA 196
P E + AFLYLS+VA TLLL YS*RRPRLEKTTSATSASQ TESSYA
Sbjct: 157 PALEVSLVAFLYLSMVALTLLLEYS*RRPRLEKTTSATSASQSTESSYA 11
Score = 37.7 bits (76), Expect(3) = 3e-023
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = -2 / -1
Query: 450 SPTKCLLVFCSIWIWLRSFADSCW* 376
SP + LL FC + I SFADSCW*
Sbjct: 259 SPIRVLLEFCKVVICCLSFADSCW* 185
Score = 25.8 bits (50), Expect(3) = 3e-023
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = -1 / -3
Query: 613 PEVHVVILKLSLPFGHVIDLGS 548
P+V VVIL+L P HV++ +
Sbjct: 422 PQVEVVILQLHFPSLHVLNFSA 357
>gb|BU995744.1|BU995744 HM11D17r HM Hordeum vulgare subsp. vulgare cDNA clone HM11D17
5-PRIME, mRNA sequence
Length = 624
Score = 168 bits (361), Expect(2) = 6e-052
Identities = 72/80 (90%), Positives = 77/80 (96%)
Frame = +2 / +2
Query: 104 MGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYANN 283
MGRGRIEIKRIEN T+RQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEY+NN
Sbjct: 209 MGRGRIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYSNN 388
Query: 284 SVKATIERYKKAHAVGSSSG 343
SVKATIERYKKA++ S+SG
Sbjct: 389 SVKATIERYKKANSDTSNSG 448
Score = 116 bits (247), Expect(2) = 7e-028
Identities = 52/64 (81%), Positives = 55/64 (85%)
Frame = -2 / -1
Query: 342 PEEEPTACAFLYLSIVAFTLLLAYS*RRPRLEKTTSATSASQRTESSYAFLRSPLRRLQK 163
PE + + AFLYLS+VAFTLL YS*RRPRLEKTT ATSASQ TESSYAFLR PLRRLQK
Sbjct: 447 PELDVSLLAFLYLSMVAFTLLFEYS*RRPRLEKTTRATSASQSTESSYAFLRRPLRRLQK 268
Query: 162 VTCR 151
VTCR
Sbjct: 267 VTCR 256
Score = 113 bits (242), Expect = 2e-024
Identities = 52/73 (71%), Positives = 57/73 (78%)
Frame = -1 / -3
Query: 322 VCLLVPLDRSLHTVVGVLVEASAAGEDDERHLGVAEDGELVRLLEEPIAALAEGDLPARV 143
V L VPL+ HTVV VLVEA+AAGEDDE LGV E ELVRLLEE +AALAEGDLP
Sbjct: 427 VGLFVPLNGGFHTVV*VLVEAAAAGEDDEGDLGVTEHRELVRLLEEAVAALAEGDLPVGG 248
Query: 142 VLDPLDLNPSPPH 104
VLD LDL+P+PPH
Sbjct: 247 VLDALDLDPAPPH 209
Score = 57.0 bits (118), Expect(2) = 6e-052
Identities = 26/63 (41%), Positives = 40/63 (63%)
Frame = +2 / +2
Query: 332 SSSGPPLLEHNAQQFYQQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKG 511
+S+ + E NAQ + Q+ S + + + +R LV DSV ++L++LKQLE RLEKG
Sbjct: 434 TSNSGTVAEVNAQYYQQESSKLRQQISSLQNSNSRSLVRDSVSTMTLRDLKQLEGRLEKG 613
Query: 512 ISK 520
I+K
Sbjct: 614 IAK 622
Score = 28.6 bits (56), Expect(2) = 7e-028
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = -2 / -1
Query: 435 LLVFCSIWIWLRSFADSCW* 376
L FC + I RS DSCW*
Sbjct: 534 LFEFCKLLICWRSLEDSCW* 475
>gb|BU998535.1|BU998535 HI11F23r HI Hordeum vulgare subsp. vulgare cDNA clone HI11F23
5-PRIME, mRNA sequence
Length = 580
Score = 168 bits (361), Expect(2) = 6e-052
Identities = 72/80 (90%), Positives = 77/80 (96%)
Frame = +2 / +2
Query: 104 MGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYANN 283
MGRGRIEIKRIEN T+RQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEY+NN
Sbjct: 209 MGRGRIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYSNN 388
Query: 284 SVKATIERYKKAHAVGSSSG 343
SVKATIERYKKA++ S+SG
Sbjct: 389 SVKATIERYKKANSDTSNSG 448
Score = 116 bits (247), Expect(2) = 1e-029
Identities = 52/64 (81%), Positives = 55/64 (85%)
Frame = -2 / -2
Query: 342 PEEEPTACAFLYLSIVAFTLLLAYS*RRPRLEKTTSATSASQRTESSYAFLRSPLRRLQK 163
PE + + AFLYLS+VAFTLL YS*RRPRLEKTT ATSASQ TESSYAFLR PLRRLQK
Sbjct: 447 PELDVSLLAFLYLSMVAFTLLFEYS*RRPRLEKTTRATSASQSTESSYAFLRRPLRRLQK 268
Query: 162 VTCR 151
VTCR
Sbjct: 267 VTCR 256
Score = 113 bits (242), Expect = 2e-024
Identities = 52/73 (71%), Positives = 57/73 (78%)
Frame = -1 / -1
Query: 322 VCLLVPLDRSLHTVVGVLVEASAAGEDDERHLGVAEDGELVRLLEEPIAALAEGDLPARV 143
V L VPL+ HTVV VLVEA+AAGEDDE LGV E ELVRLLEE +AALAEGDLP
Sbjct: 427 VGLFVPLNGGFHTVV*VLVEAAAAGEDDEGDLGVTEHRELVRLLEEAVAALAEGDLPVGG 248
Query: 142 VLDPLDLNPSPPH 104
VLD LDL+P+PPH
Sbjct: 247 VLDALDLDPAPPH 209
Score = 57.0 bits (118), Expect(2) = 6e-052
Identities = 23/37 (62%), Positives = 30/37 (81%)
Frame = +2 / +2
Query: 371 QFYQQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKEL 481
Q+YQQES+KLR QI LQN+NR LV DSV ++L++L
Sbjct: 470 QYYQQESSKLRQQISSLQNSNRSLVRDSVSTMTLRDL 580
Score = 34.5 bits (69), Expect(2) = 1e-029
Identities = 15/27 (55%), Positives = 16/27 (59%)
Frame = -2 / -2
Query: 456 TESPTKCLLVFCSIWIWLRSFADSCW* 376
TES T L FC + I RS DSCW*
Sbjct: 555 TESLTSDLFEFCKLLICWRSLEDSCW* 475
>gb|CA028005.1|CA028005 HZ60L09r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ60L09
5-PRIME, mRNA sequence
Length = 479
Score = 167 bits (360), Expect(2) = 2e-049
Identities = 73/85 (85%), Positives = 77/85 (90%)
Frame = +2 / +1
Query: 89 AEISSMGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLY 268
A MGRGRIEIKRIEN T+RQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLY
Sbjct: 118 AAAEKMGRGRIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLY 297
Query: 269 EYANNSVKATIERYKKAHAVGSSSG 343
EY+NNSVKATIERYKKA + SS+G
Sbjct: 298 EYSNNSVKATIERYKKATSDTSSAG 372
Score = 116 bits (248), Expect(2) = 9e-031
Identities = 53/64 (82%), Positives = 55/64 (85%)
Frame = -2 / -1
Query: 342 PEEEPTACAFLYLSIVAFTLLLAYS*RRPRLEKTTSATSASQRTESSYAFLRSPLRRLQK 163
P E + AFLYLS+VA TLLL YS*RRPRLEKTTSATSASQ TESSYAF RSPLRRLQK
Sbjct: 371 PALEVSLVAFLYLSMVALTLLLEYS*RRPRLEKTTSATSASQSTESSYAFFRSPLRRLQK 192
Query: 162 VTCR 151
VTCR
Sbjct: 191 VTCR 180
Score = 111 bits (237), Expect = 8e-024
Identities = 50/72 (69%), Positives = 56/72 (77%)
Frame = -1 / -3
Query: 319 CLLVPLDRSLHTVVGVLVEASAAGEDDERHLGVAEDGELVRLLEEPIAALAEGDLPARVV 140
CLLV L+ L VVGVL+EA AAG+DDER L VAE ELVRLL+E +AALAEGDLP R V
Sbjct: 348 CLLVSLNGCLDAVVGVLIEAPAAGKDDERDLSVAEHRELVRLLQESVAALAEGDLPVRRV 169
Query: 139 LDPLDLNPSPPH 104
LD LDL+P PH
Sbjct: 168 LDALDLDPPSPH 133
Score = 48.7 bits (100), Expect(2) = 2e-049
Identities = 20/28 (71%), Positives = 23/28 (82%)
Frame = +2 / +1
Query: 371 QFYQQESAKLRNQIQMLQNTNRHLVGDS 454
Q YQQESAKLR QI LQN+NR L+GD+
Sbjct: 394 QHYQQESAKLRQQITTLQNSNRTLIGDT 477
Score = 37.7 bits (76), Expect(2) = 9e-031
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = -2 / -1
Query: 450 SPTKCLLVFCSIWIWLRSFADSCW* 376
SP + LL FC + I SFADSCW*
Sbjct: 473 SPIRVLLEFCKVVICCLSFADSCW* 399
>gb|AY541067.1| Hordeum vulgare subsp. vulgare AGAMOUS LIKE6-like protein mRNA,
complete cds
Length = 1464
Score = 133 bits (285), Expect(2) = 2e-048
Identities = 55/80 (68%), Positives = 66/80 (82%)
Frame = +2 / +3
Query: 74 AREEQAEISSMGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSS 253
A EE+ E MGRGR+E+KRIEN +RQVTF KRRNGLLKKAYELSVLCDAEVAL++FSS
Sbjct: 357 AWEEEEEEEIMGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSS 536
Query: 254 RGRLYEYANNSVKATIERYK 313
RG+LYE+ + T+ERY+
Sbjct: 537 RGKLYEFGSAGTTKTLERYQ 596
Score = 102 bits (217), Expect = 4e-021
Identities = 46/71 (64%), Positives = 51/71 (71%)
Frame = -1 / -2
Query: 316 LLVPLDRSLHTVVGVLVEASAAGEDDERHLGVAEDGELVRLLEEPIAALAEGDLPARVVL 137
+LVPL LVE +AAGEDDERHLGVAE GELV LLEE +AAL EGDLP +VL
Sbjct: 599 VLVPLQCFCCAGAAELVELAAAGEDDERHLGVAEHGELVGLLEEAVAALGEGDLPVDLVL 420
Query: 136 DPLDLNPSPPH 104
D L +PSPPH
Sbjct: 419 DALQFDPSPPH 387
Score = 80.3 bits (169), Expect(2) = 2e-048
Identities = 32/85 (37%), Positives = 59/85 (69%)
Frame = +2 / +3
Query: 371 QFYQQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKGISKIRARKSELLA 550
Q + QE +KL+ + + LQ T RHL+G+ +G LS+KEL+QLE +LE +S+ R RK++L+
Sbjct: 645 QSWYQEMSKLKAKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLECSLSQARQRKTQLMM 824
Query: 551 AEINYMAKRETELQNDHMNLRTKIE 625
++ + ++E +L + + L+ K++
Sbjct: 825 EQVEELRRKERQLGDINRQLKHKLD 899
>gb|AL506475.1|AL506475 AL506475 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY03E09T 5',
mRNA sequence
Length = 673
Score = 168 bits (361), Expect(2) = 1e-046
Identities = 72/80 (90%), Positives = 77/80 (96%)
Frame = +2 / +1
Query: 104 MGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYANN 283
MGRGRIEIKRIEN T+RQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEY+NN
Sbjct: 196 MGRGRIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYSNN 375
Query: 284 SVKATIERYKKAHAVGSSSG 343
SVKATIERYKKA++ S+SG
Sbjct: 376 SVKATIERYKKANSDTSNSG 435
Score = 116 bits (247), Expect(2) = 7e-028
Identities = 52/64 (81%), Positives = 55/64 (85%)
Frame = -2 / -3
Query: 342 PEEEPTACAFLYLSIVAFTLLLAYS*RRPRLEKTTSATSASQRTESSYAFLRSPLRRLQK 163
PE + + AFLYLS+VAFTLL YS*RRPRLEKTT ATSASQ TESSYAFLR PLRRLQK
Sbjct: 434 PELDVSLLAFLYLSMVAFTLLFEYS*RRPRLEKTTRATSASQSTESSYAFLRRPLRRLQK 255
Query: 162 VTCR 151
VTCR
Sbjct: 254 VTCR 243
Score = 113 bits (242), Expect = 2e-024
Identities = 52/73 (71%), Positives = 57/73 (78%)
Frame = -1 / -2
Query: 322 VCLLVPLDRSLHTVVGVLVEASAAGEDDERHLGVAEDGELVRLLEEPIAALAEGDLPARV 143
V L VPL+ HTVV VLVEA+AAGEDDE LGV E ELVRLLEE +AALAEGDLP
Sbjct: 414 VGLFVPLNGGFHTVV*VLVEAAAAGEDDEGDLGVTEHRELVRLLEEAVAALAEGDLPVGG 235
Query: 142 VLDPLDLNPSPPH 104
VLD LDL+P+PPH
Sbjct: 234 VLDALDLDPAPPH 196
Score = 39.1 bits (79), Expect(2) = 1e-046
Identities = 15/21 (71%), Positives = 18/21 (85%)
Frame = +2 / +1
Query: 371 QFYQQESAKLRNQIQMLQNTN 433
Q+YQQES+KLR QI LQN+N
Sbjct: 457 QYYQQESSKLRQQISSLQNSN 519
Score = 28.6 bits (56), Expect(2) = 7e-028
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = -2 / -3
Query: 435 LLVFCSIWIWLRSFADSCW* 376
L FC + I RS DSCW*
Sbjct: 521 LFEFCKLLICWRSLEDSCW* 462
>gb|BU995877.1|BU995877 HM11K13r HM Hordeum vulgare subsp. vulgare cDNA clone HM11K13
5-PRIME, mRNA sequence
Length = 568
Score = 168 bits (361), Expect(2) = 1e-046
Identities = 72/80 (90%), Positives = 77/80 (96%)
Frame = +2 / +2
Query: 104 MGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYANN 283
MGRGRIEIKRIEN T+RQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEY+NN
Sbjct: 209 MGRGRIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYSNN 388
Query: 284 SVKATIERYKKAHAVGSSSG 343
SVKATIERYKKA++ S+SG
Sbjct: 389 SVKATIERYKKANSDTSNSG 448
Score = 116 bits (247), Expect(2) = 7e-028
Identities = 52/64 (81%), Positives = 55/64 (85%)
Frame = -2 / -2
Query: 342 PEEEPTACAFLYLSIVAFTLLLAYS*RRPRLEKTTSATSASQRTESSYAFLRSPLRRLQK 163
PE + + AFLYLS+VAFTLL YS*RRPRLEKTT ATSASQ TESSYAFLR PLRRLQK
Sbjct: 447 PELDVSLLAFLYLSMVAFTLLFEYS*RRPRLEKTTRATSASQSTESSYAFLRRPLRRLQK 268
Query: 162 VTCR 151
VTCR
Sbjct: 267 VTCR 256
Score = 113 bits (242), Expect = 2e-024
Identities = 52/73 (71%), Positives = 57/73 (78%)
Frame = -1 / -1
Query: 322 VCLLVPLDRSLHTVVGVLVEASAAGEDDERHLGVAEDGELVRLLEEPIAALAEGDLPARV 143
V L VPL+ HTVV VLVEA+AAGEDDE LGV E ELVRLLEE +AALAEGDLP
Sbjct: 427 VGLFVPLNGGFHTVV*VLVEAAAAGEDDEGDLGVTEHRELVRLLEEAVAALAEGDLPVGG 248
Query: 142 VLDPLDLNPSPPH 104
VLD LDL+P+PPH
Sbjct: 247 VLDALDLDPAPPH 209
Score = 39.1 bits (79), Expect(2) = 1e-046
Identities = 15/21 (71%), Positives = 18/21 (85%)
Frame = +2 / +2
Query: 371 QFYQQESAKLRNQIQMLQNTN 433
Q+YQQES+KLR QI LQN+N
Sbjct: 470 QYYQQESSKLRQQISSLQNSN 532
Score = 28.6 bits (56), Expect(2) = 7e-028
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = -2 / -2
Query: 435 LLVFCSIWIWLRSFADSCW* 376
L FC + I RS DSCW*
Sbjct: 534 LFEFCKLLICWRSLEDSCW* 475
>gb|BG415259.2|BG415259 HVSMEk0005M04f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0005M04f, mRNA sequence
Length = 892
Score = 167 bits (360), Expect(2) = 1e-041
Identities = 69/99 (69%), Positives = 84/99 (84%)
Frame = +2 / +2
Query: 95 ISSMGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEY 274
+++MGRGRIEIKRIEN TSRQVTFCKRRNGLLKKAYELSVLC+AE+AL+VFS+RGRLYEY
Sbjct: 95 LATMGRGRIEIKRIENTTSRQVTFCKRRNGLLKKAYELSVLCEAEIALIVFSARGRLYEY 274
Query: 275 ANNSVKATIERYKKAHAVGSSSGPPLLEHNAQQFYQQES 391
A+NS + TI+RYKKA A S S P + ++ Q F Q+ +
Sbjct: 275 ASNSTRTTIDRYKKASASSSGSAPAIDVNSQQYFQQESA 391
Score = 148 bits (318), Expect(2) = 4e-044
Identities = 62/107 (57%), Positives = 82/107 (76%)
Frame = +2 / +2
Query: 314 KAHAVGSSSGPPLLEHNAQQFYQQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLE 493
K + SS P ++ N+QQ++QQESAKLR QI LQN NRHL+GDSVGNL++KELK LE
Sbjct: 311 KKASASSSGSAPAIDVNSQQYFQQESAKLRQQILSLQNANRHLMGDSVGNLTVKELKTLE 490
Query: 494 SRLEKGISKIRARKSELLAAEINYMAKRETELQNDHMNLRTKIEEGE 634
+RL+K I +IR++K ELL+AEI YM K E +LQN++M LR K+ + E
Sbjct: 491 NRLDKSIGRIRSKKHELLSAEIEYMQKLEADLQNENMYLRAKVADAE 631
Score = 108 bits (230), Expect(2) = 3e-037
Identities = 47/71 (66%), Positives = 54/71 (76%)
Frame = -1 / -1
Query: 316 LLVPLDRSLHTVVGVLVEASAAGEDDERHLGVAEDGELVRLLEEPIAALAEGDLPARVVL 137
LLVP+DR V +LVEA+A GEDD+ L AEDGELV LLE+P+ ALAEG L AR VL
Sbjct: 316 LLVPVDRRPRAVTSILVEAAAGGEDDQGDLRFAEDGELVGLLEQPVPALAEGHLAARRVL 137
Query: 136 DPLDLNPSPPH 104
DPLDL+P PPH
Sbjct: 136 DPLDLDPPPPH 104
Score = 96.4 bits (204), Expect(2) = 4e-030
Identities = 48/65 (73%), Positives = 48/65 (73%)
Frame = -2 / -2
Query: 345 GPEEEPTACAFLYLSIVAFTLLLAYS*RRPRLEKTTSATSASQRTESSYAFLRSPLRRLQ 166
G E E A AFLYLSIV LLLAYS*RRPR EKT A SASQRTESS AFL SP RLQ
Sbjct: 345 GAEPEELAEAFLYLSIVVLVLLLAYS*RRPRAEKTIKAISASQRTESS*AFLSSPFLRLQ 166
Query: 165 KVTCR 151
KVT R
Sbjct: 165 KVTWR 151
Score = 68.0 bits (142), Expect(2) = 3e-037
Identities = 36/100 (36%), Positives = 49/100 (49%)
Frame = -1 / -1
Query: 610 EVHVVILKLSLPFGHVIDLGSQQLTLPGPDLRDXXXXXXXXXXXXFE*QVSHRVTNQVPV 431
++HV++L++SL HV DLG QQL L D D + QV+ + +QVPV
Sbjct: 607 KIHVLVLQISLQLLHVFDLGGQQLVLL*SDPSDALVEPILEGLEFLDGQVADGIAHQVPV 428
Query: 430 SVLQHLDLVAQFCGFXXXXXXXXXXXEWGARGRANGVCLL 311
S+LQ L+AQFC F W RA G L+
Sbjct: 427 SILQGQYLLAQFCRFLLKVLLRIDVYGWSRARRACGGLLV 308
Score = 55.6 bits (115), Expect(2) = 4e-030
Identities = 26/45 (57%), Positives = 27/45 (60%)
Frame = -2 / -2
Query: 465 KFPTESPTKCLLVFCSIWIWLRSFADSCW*NCWALCSKSGGPEEE 331
K PTESP KCLL FC I RSFADSC C L S +G EE
Sbjct: 462 KLPTESPIKCLLAFCRDSICWRSFADSC*KYC*ELTSMAGAEPEE 328
Score = 50.6 bits (104), Expect(2) = 4e-044
Identities = 21/33 (63%), Positives = 24/33 (72%)
Frame = +1 / +1
Query: 103 HGEGKD*DQEDREQHEPAGHLLQAPQWAPQEGV 201
HGEG+D DQEDRE EP LLQA + A QEG+
Sbjct: 103 HGEGEDRDQEDREHDEPPSDLLQAQERAAQEGL 201
Score = 22.6 bits (43), Expect(2) = 1e-041
Identities = 18/53 (33%), Positives = 21/53 (39%)
Frame = +3 / +3
Query: 492 RAALRKASLRSGPGRVSCWLPRSITWPKGRLSFRMTT*TSGPRLRRESNSCSR 650
R +AS S SC PRS T RL R T P+ R + SR
Sbjct: 489 RIGSTRASDGSDQRSTSCCPPRSNTCRSWRLICRTRTCIFEPKWRTRNGWPSR 647
>gb|CK124663.1|CK124663 BES1824109o14 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010O149 5-PRIME, mRNA sequence
Length = 778
Score = 117 bits (251), Expect(2) = 7e-044
Identities = 47/66 (71%), Positives = 57/66 (86%)
Frame = +2 / +2
Query: 116 RIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYANNSVKA 295
R+E+KRIEN +RQVTF KRRNGLLKKAYELSVLCDAEVAL++FSSRG+LYE+ +
Sbjct: 2 RVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSAGTTK 181
Query: 296 TIERYK 313
T+ERY+
Sbjct: 182 TLERYQ 199
Score = 80.3 bits (169), Expect(2) = 7e-044
Identities = 32/85 (37%), Positives = 59/85 (69%)
Frame = +2 / +2
Query: 371 QFYQQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKGISKIRARKSELLA 550
Q + QE +KL+ + + LQ T RHL+G+ +G LS+KEL+QLE +LE +S+ R RK++L+
Sbjct: 248 QSWYQEMSKLKAKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLECSLSQARQRKTQLMM 427
Query: 551 AEINYMAKRETELQNDHMNLRTKIE 625
++ + ++E +L + + L+ K++
Sbjct: 428 EQVEELRRKERQLGDINRQLKHKLD 502
>gb|BU969355.1|BU969355 HB11E16r BC Hordeum vulgare subsp. vulgare cDNA clone HB11E16
5-PRIME, mRNA sequence
Length = 463
Score = 167 bits (360), Expect(2) = 1e-043
Identities = 73/85 (85%), Positives = 77/85 (90%)
Frame = +2 / +1
Query: 89 AEISSMGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLY 268
A MGRGRIEIKRIEN T+RQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLY
Sbjct: 136 AAAEKMGRGRIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLY 315
Query: 269 EYANNSVKATIERYKKAHAVGSSSG 343
EY+NNSVKATIERYKKA + SS+G
Sbjct: 316 EYSNNSVKATIERYKKATSDTSSAG 390
Score = 116 bits (248), Expect(2) = 2e-026
Identities = 53/64 (82%), Positives = 55/64 (85%)
Frame = -2 / -3
Query: 342 PEEEPTACAFLYLSIVAFTLLLAYS*RRPRLEKTTSATSASQRTESSYAFLRSPLRRLQK 163
P E + AFLYLS+VA TLLL YS*RRPRLEKTTSATSASQ TESSYAF RSPLRRLQK
Sbjct: 389 PALEVSLVAFLYLSMVALTLLLEYS*RRPRLEKTTSATSASQSTESSYAFFRSPLRRLQK 210
Query: 162 VTCR 151
VTCR
Sbjct: 209 VTCR 198
Score = 111 bits (237), Expect = 8e-024
Identities = 50/72 (69%), Positives = 56/72 (77%)
Frame = -1 / -2
Query: 319 CLLVPLDRSLHTVVGVLVEASAAGEDDERHLGVAEDGELVRLLEEPIAALAEGDLPARVV 140
CLLV L+ L VVGVL+EA AAG+DDER L VAE ELVRLL+E +AALAEGDLP R V
Sbjct: 366 CLLVSLNGCLDAVVGVLIEAPAAGKDDERDLSVAEHRELVRLLQESVAALAEGDLPVRRV 187
Query: 139 LDPLDLNPSPPH 104
LD LDL+P PH
Sbjct: 186 LDALDLDPPSPH 151
Score = 29.9 bits (59), Expect(2) = 1e-043
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = +2 / +1
Query: 371 QFYQQESAKLRNQIQML 421
Q YQQESAKLR QI L
Sbjct: 412 QHYQQESAKLRQQITTL 462
Score = 23.5 bits (45), Expect(2) = 2e-026
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -2 / -3
Query: 399 SFADSCW* 376
SFADSCW*
Sbjct: 440 SFADSCW* 417
>gb|BE193581.2|BE193581 HVSMEh0081M10f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0081M10f, mRNA sequence
Length = 750
Score = 121 bits (259), Expect(2) = 2e-043
Identities = 49/73 (67%), Positives = 63/73 (86%)
Frame = +2 / +2
Query: 68 ETAREEQAEISSMGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALVVF 247
E +++ + E MGRG++E+KRI+N SRQVTF KRRNGLLKKAYELSVLCDAEVAL++F
Sbjct: 77 EGSKQARKEGGRMGRGKVELKRIDNKISRQVTFAKRRNGLLKKAYELSVLCDAEVALLIF 256
Query: 248 SSRGRLYEYANNS 286
SSRGRL+E++ +S
Sbjct: 257 SSRGRLFEFSTSS 295
Score = 75.3 bits (158), Expect(2) = 2e-043
Identities = 31/82 (37%), Positives = 56/82 (68%)
Frame = +2 / +2
Query: 383 QESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKGISKIRARKSELLAAEIN 562
QE KL+ +++ LQ T R+L+G+ +G LS+KEL+QLE+++E + +IR KS+ ++
Sbjct: 383 QEFLKLKTRVEFLQTTQRNLLGEDLGPLSMKELEQLENQIEVSLKQIRGAKSQQSLDQLF 562
Query: 563 YMAKRETELQNDHMNLRTKIEE 628
+ +RE +L + + + R KI+E
Sbjct: 563 ELKRREQQLPDVNKDFRKKIQE 628
>gb|BE195464.3|BE195464 HVSMEh0089L24f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0089L24f, mRNA sequence
Length = 786
Score = 167 bits (360), Expect = 8e-041
Identities = 69/99 (69%), Positives = 84/99 (84%)
Frame = +2 / +2
Query: 95 ISSMGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEY 274
+++MGRGRIEIKRIEN TSRQVTFCKRRNGLLKKAYELSVLC+AE+AL+VFS+RGRLYEY
Sbjct: 95 LATMGRGRIEIKRIENTTSRQVTFCKRRNGLLKKAYELSVLCEAEIALIVFSARGRLYEY 274
Query: 275 ANNSVKATIERYKKAHAVGSSSGPPLLEHNAQQFYQQES 391
A+NS + TI+RYKKA A S S P + ++ Q F Q+ +
Sbjct: 275 ASNSTRTTIDRYKKASASSSGSAPAIDVNSQQYFQQESA 391
Score = 145 bits (311), Expect(2) = 3e-043
Identities = 61/107 (57%), Positives = 82/107 (76%)
Frame = +2 / +2
Query: 314 KAHAVGSSSGPPLLEHNAQQFYQQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLE 493
K + SS P ++ N+QQ++QQESAKLR QI LQN NRHL+GDSVGNL++KELK LE
Sbjct: 311 KKASASSSGSAPAIDVNSQQYFQQESAKLRQQILSLQNANRHLMGDSVGNLTVKELKTLE 490
Query: 494 SRLEKGISKIRARKSELLAAEINYMAKRETELQNDHMNLRTKIEEGE 634
+RL+K I +IR++K ELL+AEI YM K E +LQN++M L T++ + E
Sbjct: 491 NRLDKSIGRIRSKKHELLSAEIEYMQKLEADLQNENMFLLTQVADAE 631
Score = 108 bits (230), Expect(2) = 9e-037
Identities = 47/71 (66%), Positives = 54/71 (76%)
Frame = -1 / -3
Query: 316 LLVPLDRSLHTVVGVLVEASAAGEDDERHLGVAEDGELVRLLEEPIAALAEGDLPARVVL 137
LLVP+DR V +LVEA+A GEDD+ L AEDGELV LLE+P+ ALAEG L AR VL
Sbjct: 316 LLVPVDRRPRAVTSILVEAAAGGEDDQGDLRFAEDGELVGLLEQPVPALAEGHLAARRVL 137
Query: 136 DPLDLNPSPPH 104
DPLDL+P PPH
Sbjct: 136 DPLDLDPPPPH 104
Score = 96.4 bits (204), Expect(2) = 4e-030
Identities = 48/65 (73%), Positives = 48/65 (73%)
Frame = -2 / -1
Query: 345 GPEEEPTACAFLYLSIVAFTLLLAYS*RRPRLEKTTSATSASQRTESSYAFLRSPLRRLQ 166
G E E A AFLYLSIV LLLAYS*RRPR EKT A SASQRTESS AFL SP RLQ
Sbjct: 345 GAEPEELAEAFLYLSIVVLVLLLAYS*RRPRAEKTIKAISASQRTESS*AFLSSPFLRLQ 166
Query: 165 KVTCR 151
KVT R
Sbjct: 165 KVTWR 151
Score = 66.1 bits (138), Expect(2) = 9e-037
Identities = 36/98 (36%), Positives = 47/98 (47%)
Frame = -1 / -3
Query: 604 HVVILKLSLPFGHVIDLGSQQLTLPGPDLRDXXXXXXXXXXXXFE*QVSHRVTNQVPVSV 425
HV++L++SL HV DLG QQL L D D + QV+ + +QVPVS+
Sbjct: 601 HVLVLQISLQLLHVFDLGGQQLVLL*SDPSDALVEPILEGLEFLDGQVADGIAHQVPVSI 422
Query: 424 LQHLDLVAQFCGFXXXXXXXXXXXEWGARGRANGVCLL 311
LQ L+AQFC F W RA G L+
Sbjct: 421 LQGQYLLAQFCRFLLKVLLRIDVYGWSRARRACGGLLV 308
Score = 55.6 bits (115), Expect(2) = 4e-030
Identities = 26/45 (57%), Positives = 27/45 (60%)
Frame = -2 / -1
Query: 465 KFPTESPTKCLLVFCSIWIWLRSFADSCW*NCWALCSKSGGPEEE 331
K PTESP KCLL FC I RSFADSC C L S +G EE
Sbjct: 462 KLPTESPIKCLLAFCRDSICWRSFADSC*KYC*ELTSMAGAEPEE 328
Score = 50.6 bits (104), Expect(2) = 3e-043
Identities = 21/33 (63%), Positives = 24/33 (72%)
Frame = +1 / +1
Query: 103 HGEGKD*DQEDREQHEPAGHLLQAPQWAPQEGV 201
HGEG+D DQEDRE EP LLQA + A QEG+
Sbjct: 103 HGEGEDRDQEDREHDEPPSDLLQAQERAAQEGL 201
>emb|AJ249145.1|HVU249145 Hordeum vulgare mRNA for MADS-box protein 7 (m7 gene)
Length = 984
Score = 116 bits (247), Expect(2) = 2e-042
Identities = 45/61 (73%), Positives = 57/61 (93%)
Frame = +2 / +2
Query: 104 MGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYANN 283
MGRG++E++RIEN SRQVTF KRRNGLLKKAYELS+LCDAEVAL++FS RGRL+E++++
Sbjct: 68 MGRGKVEMRRIENKISRQVTFAKRRNGLLKKAYELSLLCDAEVALIIFSGRGRLFEFSSS 247
Query: 284 S 286
S
Sbjct: 248 S 250
Score = 77.6 bits (163), Expect(2) = 2e-042
Identities = 27/82 (32%), Positives = 61/82 (74%)
Frame = +2 / +2
Query: 383 QESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKGISKIRARKSELLAAEIN 562
QE KL+ +++ LQ++ R+++G+ +G LS+KEL Q+E++++ + IR++K+++L ++
Sbjct: 338 QEYLKLKTRVEFLQSSQRNILGEDLGPLSMKELDQIENQIDASLQHIRSKKNQVLLDQLF 517
Query: 563 YMAKRETELQNDHMNLRTKIEE 628
+ +E ELQ+++ +LR K+++
Sbjct: 518 ELKSKEQELQDENKDLRKKLQD 583
>gb|BE456120.2|BE456120 HVSMEg0019N18f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0019N18f, mRNA sequence
Length = 872
Score = 116 bits (247), Expect(2) = 2e-042
Identities = 45/61 (73%), Positives = 57/61 (93%)
Frame = +2 / +3
Query: 104 MGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYANN 283
MGRG++E++RIEN SRQVTF KRRNGLLKKAYELS+LCDAEVAL++FS RGRL+E++++
Sbjct: 6 MGRGKVEMRRIENKISRQVTFAKRRNGLLKKAYELSLLCDAEVALIIFSGRGRLFEFSSS 185
Query: 284 S 286
S
Sbjct: 186 S 188
Score = 77.6 bits (163), Expect(2) = 2e-042
Identities = 27/82 (32%), Positives = 61/82 (74%)
Frame = +2 / +3
Query: 383 QESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKGISKIRARKSELLAAEIN 562
QE KL+ +++ LQ++ R+++G+ +G LS+KEL Q+E++++ + IR++K+++L ++
Sbjct: 276 QEYLKLKTRVEFLQSSQRNILGEDLGPLSMKELDQIENQIDASLQHIRSKKNQVLLDQLF 455
Query: 563 YMAKRETELQNDHMNLRTKIEE 628
+ +E ELQ+++ +LR K+++
Sbjct: 456 ELKSKEQELQDENKDLRKKLQD 521
>gb|BU984647.1|BU984647 HF04I23r HF Hordeum vulgare subsp. vulgare cDNA clone HF04I23
5-PRIME, mRNA sequence
Length = 649
Score = 109 bits (233), Expect(2) = 2e-041
Identities = 44/62 (70%), Positives = 53/62 (85%)
Frame = +2 / +2
Query: 128 KRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYANNSVKATIER 307
+RIEN +RQVTF KRRNGLLKKAYELSVLCDAEVAL++FSSRG+LYE+ + T+ER
Sbjct: 8 RRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSAGTTKTLER 187
Query: 308 YK 313
Y+
Sbjct: 188 YQ 193
Score = 80.3 bits (169), Expect(2) = 2e-041
Identities = 32/85 (37%), Positives = 59/85 (69%)
Frame = +2 / +2
Query: 371 QFYQQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKGISKIRARKSELLA 550
Q + QE +KL+ + + LQ T RHL+G+ +G LS+KEL+QLE +LE +S+ R RK++L+
Sbjct: 242 QSWYQEMSKLKAKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLECSLSQARQRKTQLMM 421
Query: 551 AEINYMAKRETELQNDHMNLRTKIE 625
++ + ++E +L + + L+ K++
Sbjct: 422 EQVEELRRKERQLGDINRQLKHKLD 496
>emb|AJ249146.1|HVU249146 Hordeum vulgare mRNA for MADS-box protein 8 (m8 gene)
Length = 1203
Score = 113 bits (241), Expect(2) = 3e-041
Identities = 44/61 (72%), Positives = 56/61 (91%)
Frame = +2 / +1
Query: 104 MGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYANN 283
MGRG++++KRIEN +RQVTF KRRNGLLKKA+E+SVLCDAEVA++VFS +G+LYEYA +
Sbjct: 43 MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYEYATD 222
Query: 284 S 286
S
Sbjct: 223 S 225
Score = 76.2 bits (160), Expect(2) = 3e-041
Identities = 32/91 (35%), Positives = 59/91 (64%)
Frame = +2 / +1
Query: 356 EHNAQQFYQQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKGISKIRARK 535
E ++ + E KL+ +I+ +Q ++HL+G+ + +L+LKEL+QLE +LE + IR+RK
Sbjct: 292 ESESEGNWCHEYRKLKAKIETIQKCHKHLMGEDLDSLNLKELQQLEQQLESSLKHIRSRK 471
Query: 536 SELLAAEINYMAKRETELQNDHMNLRTKIEE 628
S L+ I+ + K+E LQ ++ L+ ++ E
Sbjct: 472 SHLMMESISELQKKERSLQEENKALQKELVE 564
>gb|BU982429.1|BU982429 HA26I11r HA Hordeum vulgare subsp. vulgare cDNA clone HA26I11
5-PRIME, mRNA sequence
Length = 584
Score = 167 bits (360), Expect = 8e-041
Identities = 69/99 (69%), Positives = 84/99 (84%)
Frame = +2 / +1
Query: 95 ISSMGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEY 274
+++MGRGRIEIKRIEN TSRQVTFCKRRNGLLKKAYELSVLC+AE+AL+VFS+RGRLYEY
Sbjct: 94 LATMGRGRIEIKRIENTTSRQVTFCKRRNGLLKKAYELSVLCEAEIALIVFSARGRLYEY 273
Query: 275 ANNSVKATIERYKKAHAVGSSSGPPLLEHNAQQFYQQES 391
A+NS + TI+RYKKA A S S P + ++ Q F Q+ +
Sbjct: 274 ASNSTRTTIDRYKKASASSSGSAPAIDVNSQQYFQQESA 390
Score = 128 bits (274), Expect(3) = 6e-041
Identities = 54/91 (59%), Positives = 70/91 (76%)
Frame = +2 / +1
Query: 314 KAHAVGSSSGPPLLEHNAQQFYQQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLE 493
K + SS P ++ N+QQ++QQESAKLR QI LQN NRHL+GDSVGNL++KELK LE
Sbjct: 310 KKASASSSGSAPAIDVNSQQYFQQESAKLRQQILSLQNANRHLMGDSVGNLTVKELKTLE 489
Query: 494 SRLEKGISKIRARKSELLAAEINYMAKRETE 586
+RL+K I +IR++K ELL+AEI YM K E +
Sbjct: 490 NRLDKSIGRIRSKKHELLSAEIEYMQKLEAD 582
Score = 111 bits (238), Expect(2) = 1e-034
Identities = 48/71 (67%), Positives = 55/71 (77%)
Frame = -1 / -3
Query: 316 LLVPLDRSLHTVVGVLVEASAAGEDDERHLGVAEDGELVRLLEEPIAALAEGDLPARVVL 137
LLVP+DR V +LVEA+A GEDD+ LG AEDGELV LLE+P+ ALAEG L AR VL
Sbjct: 315 LLVPVDRRPRAVTSILVEAAAGGEDDQGDLGFAEDGELVGLLEQPVPALAEGHLAARRVL 136
Query: 136 DPLDLNPSPPH 104
DPLDL+P PPH
Sbjct: 135 DPLDLDPPPPH 103
Score = 96.4 bits (204), Expect(2) = 9e-025
Identities = 48/65 (73%), Positives = 48/65 (73%)
Frame = -2 / -1
Query: 345 GPEEEPTACAFLYLSIVAFTLLLAYS*RRPRLEKTTSATSASQRTESSYAFLRSPLRRLQ 166
G E E A AFLYLSIV LLLAYS*RRPR EKT A SASQRTESS AFL SP RLQ
Sbjct: 344 GAEPEELAEAFLYLSIVVLVLLLAYS*RRPRAEKTIKAISASQRTESS*AFLSSPFLRLQ 165
Query: 165 KVTCR 151
KVT R
Sbjct: 164 KVTWR 150
Score = 55.6 bits (115), Expect(2) = 1e-034
Identities = 26/45 (57%), Positives = 27/45 (60%)
Frame = -2 / -1
Query: 465 KFPTESPTKCLLVFCSIWIWLRSFADSCW*NCWALCSKSGGPEEE 331
K PTESP KCLL FC I RSFADSC C L S +G EE
Sbjct: 461 KLPTESPIKCLLAFCRDSICWRSFADSC*KYC*ELTSMAGAEPEE 327
Score = 50.6 bits (104), Expect(3) = 6e-041
Identities = 21/33 (63%), Positives = 24/33 (72%)
Frame = +1 / +3
Query: 103 HGEGKD*DQEDREQHEPAGHLLQAPQWAPQEGV 201
HGEG+D DQEDRE EP LLQA + A QEG+
Sbjct: 102 HGEGEDRDQEDREHDEPPSDLLQAQERAAQEGL 200
Score = 37.7 bits (76), Expect(2) = 9e-025
Identities = 32/88 (36%), Positives = 44/88 (50%)
Frame = -3 / -2
Query: 584 QSPFWPCN*SRQPAAHSSWP*S*RCLSQGGSPAASAL*VTSFPQSHQPSAC*CFAASGSG 405
Q P C S + AA +S S RC + S + * +S ++ SAC* FA + S
Sbjct: 580 QPPASACIRSPRTAARASLIGSARCSCRADSRGS*VP*RSSCRRNRPSSAC*HFAGTVSA 401
Query: 404 CAVLRILAGRIAGHCALRVGGQRKSQRR 321
AVL+I A IA + L + +KS RR
Sbjct: 400 GAVLQIPAESIAEN*RLWLEQSQKSLRR 317
Score = 27.6 bits (54), Expect(3) = 6e-041
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = +1 / +3
Query: 262 PLRVRQQQCEGYDREVQEGTRRWLFL 339
PLRV Q E DR+VQEG R+ +L
Sbjct: 261 PLRVC**QHEDDDRQVQEGLRKLFWL 338
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 557,520,193
Number of Sequences: 312970
Number of extensions: 10471353
Number of successful extensions: 96862
Number of sequences better than 1.0e-020: 213
length of database: 58,378,179
effective HSP length: 53
effective length of database: 41,790,769
effective search space used: 13999907615
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)