TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3536697.2.1
(651 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BF627578.2|BF627578 HVSMEb0005D17f Hordeum vulgare seedl... 270 7e-072
gb|BF258204.2|BF258204 HVSMEf0015B12f Hordeum vulgare seedl... 270 7e-072
gb|BF253522.3|BF253522 HVSMEf0001C17f Hordeum vulgare seedl... 270 7e-072
gb|AV919157.1|AV919157 AV919157 K. Sato unpublished cDNA li... 270 7e-072
gb|AV921006.1|AV921006 AV921006 K. Sato unpublished cDNA li... 267 5e-071
gb|BJ546337.1|BJ546337 BJ546337 K. Sato unpublished cDNA li... 260 6e-069
gb|BU970828.1|BU970828 HB15M21r BC Hordeum vulgare subsp. v... 256 7e-068
gb|BI958920.1|BI958920 HVSMEn0017D23f Hordeum vulgare rachi... 252 1e-066
gb|BJ548879.1|BJ548879 BJ548879 K. Sato unpublished cDNA li... 244 2e-066
gb|BF620279.2|BF620279 HVSMEc0019E20f Hordeum vulgare seedl... 243 7e-064
gb|AV909217.1|AV909217 AV909217 K. Sato unpublished cDNA li... 240 5e-063
gb|AV911101.1|AV911101 AV911101 K. Sato unpublished cDNA li... 240 5e-063
gb|BJ477449.1|BJ477449 BJ477449 K. Sato unpublished cDNA li... 240 5e-063
gb|BU982278.1|BU982278 HA26A18r HA Hordeum vulgare subsp. v... 240 5e-063
gb|BQ757608.1|BQ757608 EBem10_SQ004_K13_R embryo, 2 Day ger... 238 2e-062
gb|CV062330.1|CV062330 BNEL78h1 Barley EST endosperm librar... 235 2e-061
gb|CV063225.1|CV063225 BNEL88a10 Barley EST endosperm libra... 235 2e-061
gb|BF256948.2|BF256948 HVSMEf0011H06f Hordeum vulgare seedl... 235 2e-061
gb|BJ546155.1|BJ546155 BJ546155 K. Sato unpublished cDNA li... 232 1e-060
gb|AV911559.1|AV911559 AV911559 K. Sato unpublished cDNA li... 230 5e-060
gb|BJ449493.1|BJ449493 BJ449493 K. Sato unpublished cDNA li... 230 7e-060
gb|BF260520.3|BF260520 HVSMEf0022D16f Hordeum vulgare seedl... 229 1e-059
gb|AL510717.1|AL510717 AL510717 Hordeum vulgare Barke devel... 210 2e-059
gb|CA002810.1|CA002810 HS08J14r HS Hordeum vulgare subsp. v... 224 4e-058
gb|BU972745.1|BU972745 HB22J12r BC Hordeum vulgare subsp. v... 217 5e-056
gb|BJ544684.1|BJ544684 BJ544684 K. Sato unpublished cDNA li... 217 5e-056
gb|BU996667.1|BU996667 HM14F14r HM Hordeum vulgare subsp. v... 215 3e-055
gb|BM816655.1|BM816655 HB01A07_T3.ab1 HB Hordeum vulgare su... 201 4e-055
gb|AV936421.1|AV936421 AV936421 K. Sato unpublished cDNA li... 197 2e-053
gb|BE455469.2|BE455469 HVSMEg0017F01f Hordeum vulgare pre-a... 204 5e-052
gb|AV920933.1|AV920933 AV920933 K. Sato unpublished cDNA li... 199 9e-051
gb|BM443008.2|BM443008 EBro02_SQ002_C21_R root, 3 week, hyd... 198 2e-050
gb|BG418221.1|BG418221 HVSMEk0021P03f Hordeum vulgare testa... 197 6e-050
gb|AJ463159.1|AJ463159 AJ463159 S00002 Hordeum vulgare subs... 196 8e-050
gb|BI960078.1|BI960078 HVSMEn0023C04f Hordeum vulgare rachi... 194 4e-049
gb|AJ463158.1|AJ463158 AJ463158 S00002 Hordeum vulgare subs... 189 1e-047
gb|BJ456934.1|BJ456934 BJ456934 K. Sato unpublished cDNA li... 179 1e-044
gb|BM370165.2|BM370165 EBro08_SQ003_D02_R root, 3 week, dro... 175 3e-043
gb|BF256552.2|BF256552 HVSMEf0010F04f Hordeum vulgare seedl... 173 7e-043
gb|AV917603.1|AV917603 AV917603 K. Sato unpublished cDNA li... 173 7e-043
gb|AV918649.1|AV918649 AV918649 K. Sato unpublished cDNA li... 173 7e-043
gb|AV918871.1|AV918871 AV918871 K. Sato unpublished cDNA li... 173 7e-043
gb|AV919156.1|AV919156 AV919156 K. Sato unpublished cDNA li... 173 7e-043
gb|AV919513.1|AV919513 AV919513 K. Sato unpublished cDNA li... 173 7e-043
gb|AV919679.1|AV919679 AV919679 K. Sato unpublished cDNA li... 173 7e-043
gb|AV921216.1|AV921216 AV921216 K. Sato unpublished cDNA li... 173 7e-043
gb|AV921346.1|AV921346 AV921346 K. Sato unpublished cDNA li... 173 7e-043
gb|AV921718.1|AV921718 AV921718 K. Sato unpublished cDNA li... 173 7e-043
gb|BJ457809.1|BJ457809 BJ457809 K. Sato unpublished cDNA li... 173 7e-043
gb|BJ462617.1|BJ462617 BJ462617 K. Sato unpublished cDNA li... 173 7e-043
gb|BJ463352.1|BJ463352 BJ463352 K. Sato unpublished cDNA li... 173 7e-043
gb|BJ463970.1|BJ463970 BJ463970 K. Sato unpublished cDNA li... 173 7e-043
gb|BJ466237.1|BJ466237 BJ466237 K. Sato unpublished cDNA li... 173 7e-043
gb|BJ466302.1|BJ466302 BJ466302 K. Sato unpublished cDNA li... 173 7e-043
gb|BJ467706.1|BJ467706 BJ467706 K. Sato unpublished cDNA li... 173 7e-043
gb|BJ467865.1|BJ467865 BJ467865 K. Sato unpublished cDNA li... 173 7e-043
gb|BQ658243.1|BQ658243 HB09P05w BC Hordeum vulgare subsp. v... 173 7e-043
gb|BQ658402.1|BQ658402 HB09E05w BC Hordeum vulgare subsp. v... 173 7e-043
gb|BQ660562.1|BQ660562 HI04D15u HI Hordeum vulgare subsp. v... 173 7e-043
gb|BQ763511.1|BQ763511 EBro02_SQ008_I15_R root, 3 week, hyd... 173 7e-043
gb|BQ763954.1|BQ763954 EBro03_SQ005_J20_R root, 3 week, wat... 173 7e-043
gb|BQ767952.1|BQ767952 EBro08_SQ010_E07_R root, 3 week, dro... 173 7e-043
gb|CA017402.1|CA017402 HV05B15r HV Hordeum vulgare subsp. v... 173 7e-043
gb|BJ549915.1|BJ549915 BJ549915 K. Sato unpublished cDNA li... 173 7e-043
gb|BF258305.2|BF258305 HVSMEf0015F24f Hordeum vulgare seedl... 171 2e-042
gb|BE215685.3|BE215685 HV_CEb0007P22f Hordeum vulgare seedl... 171 2e-042
gb|AV909659.1|AV909659 AV909659 K. Sato unpublished cDNA li... 119 3e-042
gb|BG301258.2|BG301258 HVSMEb0020E14f Hordeum vulgare seedl... 158 2e-041
gb|BE231175.2|BE231175 HVSMEg0017G06f Hordeum vulgare pre-a... 167 6e-041
gb|AV914847.1|AV914847 AV914847 K. Sato unpublished cDNA li... 167 6e-041
gb|BQ763370.1|BQ763370 EBro02_SQ008_K01_R root, 3 week, hyd... 111 7e-041
gb|BF254210.3|BF254210 HVSMEf0003F07f Hordeum vulgare seedl... 164 4e-040
gb|BJ454281.1|BJ454281 BJ454281 K. Sato unpublished cDNA li... 163 7e-040
gb|AV921342.1|AV921342 AV921342 K. Sato unpublished cDNA li... 162 2e-039
gb|BJ461814.1|BJ461814 BJ461814 K. Sato unpublished cDNA li... 162 2e-039
gb|BI959211.1|BI959211 HVSMEn0018K15f Hordeum vulgare rachi... 158 3e-038
gb|AV922111.1|AV922111 AV922111 K. Sato unpublished cDNA li... 158 3e-038
gb|AV930865.1|AV930865 AV930865 K. Sato unpublished cDNA li... 158 3e-038
gb|BQ664682.1|BQ664682 HV04G11u HV Hordeum vulgare subsp. v... 158 3e-038
gb|BU987625.1|BU987625 HF15E16r HF Hordeum vulgare subsp. v... 158 3e-038
gb|BF260651.2|BF260651 HVSMEf0022J07f Hordeum vulgare seedl... 157 4e-038
gb|BG416704.2|BG416704 HVSMEk0014D01f Hordeum vulgare testa... 144 1e-037
gb|AV913689.1|AV913689 AV913689 K. Sato unpublished cDNA li... 155 2e-037
gb|CB877081.1|CB877081 HP03I02T HP Hordeum vulgare subsp. v... 151 3e-036
gb|BF259502.2|BF259502 HVSMEf0019I02f Hordeum vulgare seedl... 151 4e-036
gb|AL510116.1|AL510116 AL510116 Hordeum vulgare Barke devel... 147 5e-035
gb|BE519855.1|BE519855 HV_CEb0021H15f Hordeum vulgare seedl... 147 5e-035
gb|BJ468273.1|BJ468273 BJ468273 K. Sato unpublished cDNA li... 147 5e-035
gb|CB858420.1|CB858420 HI06P03w HI Hordeum vulgare subsp. v... 142 2e-033
gb|CB874388.1|CB874388 HX05B24w HX Hordeum vulgare subsp. v... 142 2e-033
gb|AL509971.1|AL509971 AL509971 Hordeum vulgare Barke devel... 125 3e-033
gb|CB879741.1|CB879741 HP03I02w HP Hordeum vulgare subsp. v... 141 3e-033
gb|AL502423.1|AL502423 AL502423 Hordeum vulgare Barke roots... 141 4e-033
gb|AV918957.1|AV918957 AV918957 K. Sato unpublished cDNA li... 81 6e-033
gb|AV918391.1|AV918391 AV918391 K. Sato unpublished cDNA li... 81 1e-032
gb|AV912428.1|AV912428 AV912428 K. Sato unpublished cDNA li... 136 1e-031
gb|BU972342.1|BU972342 HB21G01r BC Hordeum vulgare subsp. v... 135 2e-031
gb|AJ436651.1|AJ436651 AJ436651 S00002 Hordeum vulgare subs... 133 9e-031
gb|BG417116.1|BG417116 HVSMEk0016F09f Hordeum vulgare testa... 132 2e-030
gb|AV913541.1|AV913541 AV913541 K. Sato unpublished cDNA li... 131 3e-030
gb|AV918994.1|AV918994 AV918994 K. Sato unpublished cDNA li... 81 4e-030
gb|BM372796.2|BM372796 EBpi05_SQ003_P06_R pistil, 8 DPA, no... 130 6e-030
gb|BM373174.2|BM373174 EBma04_SQ003_G07_R maternal, 10 DPA,... 128 2e-029
gb|BQ757060.1|BQ757060 EBem10_SQ002_K18_R embryo, 2 Day ger... 126 1e-028
gb|BJ544855.1|BJ544855 BJ544855 K. Sato unpublished cDNA li... 125 2e-028
gb|BI951009.1|BI951009 HVSMEl0024A04f Hordeum vulgare spike... 116 4e-028
gb|BQ471753.1|BQ471753 HV03F22r HV Hordeum vulgare subsp. v... 124 5e-028
gb|BI958082.1|BI958082 HVSMEn0013D12f Hordeum vulgare rachi... 123 7e-028
gb|CB880960.1|CB880960 HM08F16w HM Hordeum vulgare subsp. v... 123 7e-028
gb|CB877082.1|CB877082 HP03I03T HP Hordeum vulgare subsp. v... 123 1e-027
gb|BI947157.1|BI947157 HVSMEl0003P09f Hordeum vulgare spike... 120 7e-027
gb|AL502503.1|AL502503 AL502503 Hordeum vulgare Barke roots... 120 9e-027
gb|BJ466118.1|BJ466118 BJ466118 K. Sato unpublished cDNA li... 117 4e-026
gb|BJ467263.1|BJ467263 BJ467263 K. Sato unpublished cDNA li... 117 4e-026
gb|BM370094.2|BM370094 EBro08_SQ002_P14_R root, 3 week, dro... 117 4e-026
gb|BQ762329.1|BQ762329 EBro01_SQ005_C16_R root, 3 week, hyd... 117 4e-026
gb|AV930869.1|AV930869 AV930869 K. Sato unpublished cDNA li... 115 3e-025
gb|CA016125.1|CA016125 HV10D08u HV Hordeum vulgare subsp. v... 115 3e-025
gb|CA016785.1|CA016785 HV06E14u HV Hordeum vulgare subsp. v... 115 3e-025
gb|AV913736.1|AV913736 AV913736 K. Sato unpublished cDNA li... 114 6e-025
gb|AV920629.1|AV920629 AV920629 K. Sato unpublished cDNA li... 107 6e-025
gb|AV919076.1|AV919076 AV919076 K. Sato unpublished cDNA li... 107 6e-025
gb|AV914112.1|AV914112 AV914112 K. Sato unpublished cDNA li... 113 8e-025
gb|AL511382.1|AL511382 AL511382 Hordeum vulgare Barke devel... 112 1e-024
gb|BQ664074.1|BQ664074 HV01J15w HV Hordeum vulgare subsp. v... 112 2e-024
gb|BJ465749.1|BJ465749 BJ465749 K. Sato unpublished cDNA li... 107 7e-024
gb|BU969174.1|BU969174 HB10M08r BC Hordeum vulgare subsp. v... 75 4e-023
gb|BE060857.3|BE060857 HVSMEg0013J21f Hordeum vulgare pre-a... 105 2e-022
gb|BJ464957.1|BJ464957 BJ464957 K. Sato unpublished cDNA li... 102 2e-021
gb|AV915891.1|AV915891 AV915891 K. Sato unpublished cDNA li... 100 6e-021
>gb|BF627578.2|BF627578 HVSMEb0005D17f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0005D17f, mRNA sequence
Length = 771
Score = 270 bits (583), Expect = 7e-072
Identities = 110/131 (83%), Positives = 118/131 (90%)
Frame = +3 / +3
Query: 6 VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKV 185
VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLM+LMEG+HIGPFNLGNPGEF+MLELAKV
Sbjct: 264 VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMRLMEGDHIGPFNLGNPGEFTMLELAKV 443
Query: 186 VQDTIDPEAHIEFRPNTADDPHKRKPDISRAKELLGWEPKVPLREGLPRMVTDFRKRIFG 365
VQDTIDP A IEFR NT DDPHKRKPDI+RAKE LGWEPK+ LR+GLP MVTDFRKRIFG
Sbjct: 444 VQDTIDPNARIEFRENTQDDPHKRKPDITRAKEQLGWEPKIALRDGLPLMVTDFRKRIFG 623
Query: 366 DQEGSTESAGG 398
DQ+ + G
Sbjct: 624 DQDSAGTGTEG 656
Score = 226 bits (488), Expect = 9e-059
Identities = 100/123 (81%), Positives = 108/123 (87%)
Frame = -3 / -3
Query: 373 SWSPKIRLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMV 194
SWSP IRLRKSVT+RGRPSRR LGS P S A ++SGLRLCGSS VF RNS+ A GSMV
Sbjct: 631 SWSPNIRLRKSVTIRGRPSRRAILGSHPSCSLALVISGLRLCGSSWVFSRNSIRAFGSMV 452
Query: 193 SWTTLASSSMLNSPGLPRLNGPMCSPSMSFISPSTKSETY*KLLVCLPSP*TVKGSFLSA 14
SWTTLASSSM+NSPGLP+LNGPM SPS+S I+PSTKSETY KLLVCLPSP*TVKGSFLSA
Sbjct: 451 SWTTLASSSMVNSPGLPKLNGPM*SPSISLINPSTKSETYWKLLVCLPSP*TVKGSFLSA 272
Query: 13 *AT 5
*AT
Sbjct: 271 *AT 263
Score = 162 bits (348), Expect = 2e-039
Identities = 71/125 (56%), Positives = 92/125 (73%)
Frame = -2 / -2
Query: 380 GPFLVPEDTFAEVSDHAGKALTEGNLGLPAEELFRAADVRLALVRIICGVRTELDVRLWV 201
G LV E AEV +H G+A+TEG+LGLP + L + D+ LALVR++ GV TELD R+ V
Sbjct: 638 GAILVAEYPLAEVGNHKGEAVTEGDLGLPPKLLLGSGDIWLALVRVVLGVLTELDPRVRV 459
Query: 200 DGVLDHLSQLQHAEFSRVAEVERPNVLPFHELHQPFHQI*DILKAPSLLAITIDCQRLLP 21
DGVLD+L Q QH E + VA+VE PNV+ FH+ HQP +QI ++L+ P LLAI ++ QRLLP
Sbjct: 458 DGVLDNLGQFQHGELTGVAQVEWPNVITFHQPHQPLNQIRNVLETPGLLAIAVNRQRLLP 279
Query: 20 QRLSN 6
RLSN
Sbjct: 278 *RLSN 264
Score = 73.0 bits (153), Expect(2) = 2e-026
Identities = 36/86 (41%), Positives = 42/86 (48%)
Frame = +1 / +1
Query: 124 TLGRSTSATLENSACWSWLXXXXXXXXXXXXXXXXXXPQMIRTSASLTSAARKSSSAGSP 303
TLG ST AT +S CW+W P+ RTSAS S +S+ GSP
Sbjct: 382 TLGHSTWATPVSSPCWNWPRLSRTPSTRTRGSSSVRTPRTTRTSASQISPEPRSNLGGSP 561
Query: 304 RFPSVRAFPAWSLTSANVSSGTRKGP 381
R PSV A P W TSA+ S TR P
Sbjct: 562 RSPSVTASPLWLPTSASGYSATRIAP 639
Score = 65.7 bits (137), Expect(2) = 2e-026
Identities = 29/48 (60%), Positives = 32/48 (66%)
Frame = +2 / +2
Query: 8 CSGAEEGAFDSLW*WQAD*ELSICLRFGGRADEAHGRGAHWAVQPRQP 151
CSGA+EGAFD L WQAD E I FG DEA GR +HWA+Q QP
Sbjct: 266 CSGAKEGAFDGLRRWQADQEFPIRF*FG*GVDEADGR*SHWAIQLGQP 409
>gb|BF258204.2|BF258204 HVSMEf0015B12f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0015B12f, mRNA sequence
Length = 749
Score = 270 bits (583), Expect = 7e-072
Identities = 109/131 (83%), Positives = 119/131 (90%)
Frame = +3 / +1
Query: 6 VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKV 185
VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLM+LMEG+HIGPFNLGNPGEF+MLELAKV
Sbjct: 40 VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMRLMEGDHIGPFNLGNPGEFTMLELAKV 219
Query: 186 VQDTIDPEAHIEFRPNTADDPHKRKPDISRAKELLGWEPKVPLREGLPRMVTDFRKRIFG 365
VQDTIDP A IEFR NT DDPHKRKPDI++AKE LGWEPK+ LR+GLP MVTDFRKRIFG
Sbjct: 220 VQDTIDPNARIEFRENTQDDPHKRKPDITKAKEQLGWEPKIALRDGLPLMVTDFRKRIFG 399
Query: 366 DQEGSTESAGG 398
DQ+ + + G
Sbjct: 400 DQDSAATATEG 432
Score = 228 bits (492), Expect = 3e-059
Identities = 101/123 (82%), Positives = 108/123 (87%)
Frame = -3 / -1
Query: 373 SWSPKIRLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMV 194
SWSP IRLRKSVTMRGRPSRR LGS P S A ++SGLRLCGSS VF RNS+ A GSMV
Sbjct: 407 SWSPNIRLRKSVTMRGRPSRRAILGSHPSCSLALVISGLRLCGSSWVFSRNSIRAFGSMV 228
Query: 193 SWTTLASSSMLNSPGLPRLNGPMCSPSMSFISPSTKSETY*KLLVCLPSP*TVKGSFLSA 14
SWTTLASSSM+NSPGLP+LNGPM SPS+S I+PSTKSETY KLLVCLPSP*TVKGSFLSA
Sbjct: 227 SWTTLASSSMVNSPGLPKLNGPM*SPSISLINPSTKSETYWKLLVCLPSP*TVKGSFLSA 48
Query: 13 *AT 5
*AT
Sbjct: 47 *AT 39
Score = 164 bits (352), Expect = 5e-040
Identities = 72/126 (57%), Positives = 92/126 (73%)
Frame = -2 / -3
Query: 383 GGPFLVPEDTFAEVSDHAGKALTEGNLGLPAEELFRAADVRLALVRIICGVRTELDVRLW 204
GG LV E AEV +H G+A+TEG+LGLP + L D+ LALVR++ GV TELD R+
Sbjct: 417 GGAILVAEYPLAEVGNHEGEAVTEGDLGLPPKLLLGLGDIWLALVRVVLGVLTELDPRVR 238
Query: 203 VDGVLDHLSQLQHAEFSRVAEVERPNVLPFHELHQPFHQI*DILKAPSLLAITIDCQRLL 24
VDGVLD+L Q QH E + VA+VE PNV+ FH+ HQP +QI ++L+ P LLAI ++ QRLL
Sbjct: 237 VDGVLDNLGQFQHGELTGVAQVEWPNVITFHQPHQPLNQIRNVLETPGLLAIAVNRQRLL 58
Query: 23 PQRLSN 6
P RLSN
Sbjct: 57 P*RLSN 40
Score = 77.1 bits (162), Expect(2) = 1e-027
Identities = 37/87 (42%), Positives = 44/87 (50%)
Frame = +1 / +2
Query: 124 TLGRSTSATLENSACWSWLXXXXXXXXXXXXXXXXXXPQMIRTSASLTSAARKSSSAGSP 303
TLG ST AT +S CW+W P+ RTSAS S +S+ GSP
Sbjct: 158 TLGHSTWATPVSSPCWNWPRLSRTPSTRTRGSSSVRTPRTTRTSASQISPRPRSNLGGSP 337
Query: 304 RFPSVRAFPAWSLTSANVSSGTRKGPP 384
R PSV A P+W TSA+ S TR PP
Sbjct: 338 RSPSVTASPSWLPTSASGYSATRIAPP 418
Score = 65.7 bits (137), Expect(2) = 1e-027
Identities = 29/48 (60%), Positives = 32/48 (66%)
Frame = +2 / +3
Query: 8 CSGAEEGAFDSLW*WQAD*ELSICLRFGGRADEAHGRGAHWAVQPRQP 151
CSGA+EGAFD L WQAD E I FG DEA GR +HWA+Q QP
Sbjct: 42 CSGAKEGAFDGLRRWQADQEFPIRF*FG*GVDEADGR*SHWAIQLGQP 185
>gb|BF253522.3|BF253522 HVSMEf0001C17f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0001C17f, mRNA sequence
Length = 850
Score = 270 bits (583), Expect = 7e-072
Identities = 109/131 (83%), Positives = 119/131 (90%)
Frame = +3 / +2
Query: 6 VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKV 185
VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLM+LMEG+HIGPFNLGNPGEF+MLELAKV
Sbjct: 8 VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMRLMEGDHIGPFNLGNPGEFTMLELAKV 187
Query: 186 VQDTIDPEAHIEFRPNTADDPHKRKPDISRAKELLGWEPKVPLREGLPRMVTDFRKRIFG 365
VQDTIDP A IEFR NT DDPHKRKPDI++AKE LGWEPK+ LR+GLP MVTDFRKRIFG
Sbjct: 188 VQDTIDPNARIEFRENTQDDPHKRKPDITKAKEQLGWEPKIALRDGLPLMVTDFRKRIFG 367
Query: 366 DQEGSTESAGG 398
DQ+ + + G
Sbjct: 368 DQDSAATATEG 400
Score = 228 bits (492), Expect = 3e-059
Identities = 101/123 (82%), Positives = 108/123 (87%)
Frame = -3 / -2
Query: 373 SWSPKIRLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMV 194
SWSP IRLRKSVTMRGRPSRR LGS P S A ++SGLRLCGSS VF RNS+ A GSMV
Sbjct: 375 SWSPNIRLRKSVTMRGRPSRRAILGSHPSCSLALVISGLRLCGSSWVFSRNSIRAFGSMV 196
Query: 193 SWTTLASSSMLNSPGLPRLNGPMCSPSMSFISPSTKSETY*KLLVCLPSP*TVKGSFLSA 14
SWTTLASSSM+NSPGLP+LNGPM SPS+S I+PSTKSETY KLLVCLPSP*TVKGSFLSA
Sbjct: 195 SWTTLASSSMVNSPGLPKLNGPM*SPSISLINPSTKSETYWKLLVCLPSP*TVKGSFLSA 16
Query: 13 *AT 5
*AT
Sbjct: 15 *AT 7
Score = 164 bits (352), Expect = 5e-040
Identities = 72/126 (57%), Positives = 92/126 (73%)
Frame = -2 / -1
Query: 383 GGPFLVPEDTFAEVSDHAGKALTEGNLGLPAEELFRAADVRLALVRIICGVRTELDVRLW 204
GG LV E AEV +H G+A+TEG+LGLP + L D+ LALVR++ GV TELD R+
Sbjct: 385 GGAILVAEYPLAEVGNHEGEAVTEGDLGLPPKLLLGLGDIWLALVRVVLGVLTELDPRVR 206
Query: 203 VDGVLDHLSQLQHAEFSRVAEVERPNVLPFHELHQPFHQI*DILKAPSLLAITIDCQRLL 24
VDGVLD+L Q QH E + VA+VE PNV+ FH+ HQP +QI ++L+ P LLAI ++ QRLL
Sbjct: 205 VDGVLDNLGQFQHGELTGVAQVEWPNVITFHQPHQPLNQIRNVLETPGLLAIAVNRQRLL 26
Query: 23 PQRLSN 6
P RLSN
Sbjct: 25 P*RLSN 8
>gb|AV919157.1|AV919157 AV919157 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags4m11 3', mRNA sequence
Length = 678
Score = 270 bits (583), Expect = 7e-072
Identities = 109/131 (83%), Positives = 119/131 (90%)
Frame = +3 / -3
Query: 6 VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKV 185
VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLM+LMEG+HIGPFNLGNPGEF+MLELAKV
Sbjct: 601 VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMRLMEGDHIGPFNLGNPGEFTMLELAKV 422
Query: 186 VQDTIDPEAHIEFRPNTADDPHKRKPDISRAKELLGWEPKVPLREGLPRMVTDFRKRIFG 365
VQDTIDP A IEFR NT DDPHKRKPDI++AKE LGWEPK+ LR+GLP MVTDFRKRIFG
Sbjct: 421 VQDTIDPNARIEFRENTQDDPHKRKPDITKAKEQLGWEPKIALRDGLPLMVTDFRKRIFG 242
Query: 366 DQEGSTESAGG 398
DQ+ + + G
Sbjct: 241 DQDSAATATEG 209
Score = 228 bits (492), Expect = 3e-059
Identities = 101/123 (82%), Positives = 108/123 (87%)
Frame = -3 / +3
Query: 373 SWSPKIRLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMV 194
SWSP IRLRKSVTMRGRPSRR LGS P S A ++SGLRLCGSS VF RNS+ A GSMV
Sbjct: 234 SWSPNIRLRKSVTMRGRPSRRAILGSHPSCSLALVISGLRLCGSSWVFSRNSIRAFGSMV 413
Query: 193 SWTTLASSSMLNSPGLPRLNGPMCSPSMSFISPSTKSETY*KLLVCLPSP*TVKGSFLSA 14
SWTTLASSSM+NSPGLP+LNGPM SPS+S I+PSTKSETY KLLVCLPSP*TVKGSFLSA
Sbjct: 414 SWTTLASSSMVNSPGLPKLNGPM*SPSISLINPSTKSETYWKLLVCLPSP*TVKGSFLSA 593
Query: 13 *AT 5
*AT
Sbjct: 594 *AT 602
Score = 164 bits (352), Expect = 5e-040
Identities = 72/126 (57%), Positives = 92/126 (73%)
Frame = -2 / +2
Query: 383 GGPFLVPEDTFAEVSDHAGKALTEGNLGLPAEELFRAADVRLALVRIICGVRTELDVRLW 204
GG LV E AEV +H G+A+TEG+LGLP + L D+ LALVR++ GV TELD R+
Sbjct: 224 GGAILVAEYPLAEVGNHEGEAVTEGDLGLPPKLLLGLGDIWLALVRVVLGVLTELDPRVR 403
Query: 203 VDGVLDHLSQLQHAEFSRVAEVERPNVLPFHELHQPFHQI*DILKAPSLLAITIDCQRLL 24
VDGVLD+L Q QH E + VA+VE PNV+ FH+ HQP +QI ++L+ P LLAI ++ QRLL
Sbjct: 404 VDGVLDNLGQFQHGELTGVAQVEWPNVITFHQPHQPLNQIRNVLETPGLLAIAVNRQRLL 583
Query: 23 PQRLSN 6
P RLSN
Sbjct: 584 P*RLSN 601
Score = 77.1 bits (162), Expect(2) = 1e-027
Identities = 37/87 (42%), Positives = 44/87 (50%)
Frame = +1 / -1
Query: 124 TLGRSTSATLENSACWSWLXXXXXXXXXXXXXXXXXXPQMIRTSASLTSAARKSSSAGSP 303
TLG ST AT +S CW+W P+ RTSAS S +S+ GSP
Sbjct: 483 TLGHSTWATPVSSPCWNWPRLSRTPSTRTRGSSSVRTPRTTRTSASQISPRPRSNLGGSP 304
Query: 304 RFPSVRAFPAWSLTSANVSSGTRKGPP 384
R PSV A P+W TSA+ S TR PP
Sbjct: 303 RSPSVTASPSWLPTSASGYSATRIAPP 223
Score = 65.7 bits (137), Expect(2) = 1e-027
Identities = 29/48 (60%), Positives = 32/48 (66%)
Frame = +2 / -2
Query: 8 CSGAEEGAFDSLW*WQAD*ELSICLRFGGRADEAHGRGAHWAVQPRQP 151
CSGA+EGAFD L WQAD E I FG DEA GR +HWA+Q QP
Sbjct: 599 CSGAKEGAFDGLRRWQADQEFPIRF*FG*GVDEADGR*SHWAIQLGQP 456
>gb|AV921006.1|AV921006 AV921006 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags16h19 3', mRNA sequence
Length = 705
Score = 267 bits (577), Expect = 5e-071
Identities = 108/131 (82%), Positives = 118/131 (90%)
Frame = +3 / -2
Query: 6 VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKV 185
VAQALRK PLTVYGDGKQTRSFQYVSDLVEGLM+LMEG+HIGPFNLGNPGEF+MLELAKV
Sbjct: 602 VAQALRKXPLTVYGDGKQTRSFQYVSDLVEGLMRLMEGDHIGPFNLGNPGEFTMLELAKV 423
Query: 186 VQDTIDPEAHIEFRPNTADDPHKRKPDISRAKELLGWEPKVPLREGLPRMVTDFRKRIFG 365
VQDTIDP A IEFR NT DDPHKRKPDI++AKE LGWEPK+ LR+GLP MVTDFRKRIFG
Sbjct: 422 VQDTIDPNARIEFRENTQDDPHKRKPDITKAKEQLGWEPKIALRDGLPLMVTDFRKRIFG 243
Query: 366 DQEGSTESAGG 398
DQ+ + + G
Sbjct: 242 DQDSAATATEG 210
Score = 226 bits (488), Expect = 9e-059
Identities = 100/123 (81%), Positives = 107/123 (86%)
Frame = -3 / +1
Query: 373 SWSPKIRLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMV 194
SWSP IRLRKSVTMRGRPSRR LGS P S A ++SGLRLCGSS VF RNS+ A GSMV
Sbjct: 235 SWSPNIRLRKSVTMRGRPSRRAILGSHPSCSLALVISGLRLCGSSWVFSRNSIRAFGSMV 414
Query: 193 SWTTLASSSMLNSPGLPRLNGPMCSPSMSFISPSTKSETY*KLLVCLPSP*TVKGSFLSA 14
SWTTLASSSM+NSPGLP+LNGPM SPS+S I+PSTKSETY KLLVCLPSP*TVKG FLSA
Sbjct: 415 SWTTLASSSMVNSPGLPKLNGPM*SPSISLINPSTKSETYWKLLVCLPSP*TVKGXFLSA 594
Query: 13 *AT 5
*AT
Sbjct: 595 *AT 603
Score = 164 bits (352), Expect = 5e-040
Identities = 72/126 (57%), Positives = 92/126 (73%)
Frame = -2 / +3
Query: 383 GGPFLVPEDTFAEVSDHAGKALTEGNLGLPAEELFRAADVRLALVRIICGVRTELDVRLW 204
GG LV E AEV +H G+A+TEG+LGLP + L D+ LALVR++ GV TELD R+
Sbjct: 225 GGAILVAEYPLAEVGNHEGEAVTEGDLGLPPKLLLGLGDIWLALVRVVLGVLTELDPRVR 404
Query: 203 VDGVLDHLSQLQHAEFSRVAEVERPNVLPFHELHQPFHQI*DILKAPSLLAITIDCQRLL 24
VDGVLD+L Q QH E + VA+VE PNV+ FH+ HQP +QI ++L+ P LLAI ++ QRLL
Sbjct: 405 VDGVLDNLGQFQHGELTGVAQVEWPNVITFHQPHQPLNQIRNVLETPGLLAIAVNRQRLL 584
Query: 23 PQRLSN 6
P RLSN
Sbjct: 585 P*RLSN 602
>gb|BJ546337.1|BJ546337 BJ546337 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak39a18 3', mRNA sequence
Length = 514
Score = 260 bits (562), Expect = 6e-069
Identities = 104/126 (82%), Positives = 114/126 (90%)
Frame = +3 / -3
Query: 21 RKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKVVQDTI 200
RKEPLTVYGDGKQTRSFQYVSDLVEGLM+LMEG+HIGPFNLGNPGEF+MLELAKVVQDTI
Sbjct: 512 RKEPLTVYGDGKQTRSFQYVSDLVEGLMRLMEGDHIGPFNLGNPGEFTMLELAKVVQDTI 333
Query: 201 DPEAHIEFRPNTADDPHKRKPDISRAKELLGWEPKVPLREGLPRMVTDFRKRIFGDQEGS 380
DP A IEFR NT DDPHKRKPDI++AKE LGWEPK+ LR+GLP MVTDFRKRIFGDQ+ +
Sbjct: 332 DPNARIEFRENTQDDPHKRKPDITKAKEQLGWEPKIALRDGLPLMVTDFRKRIFGDQDSA 153
Query: 381 TESAGG 398
+ G
Sbjct: 152 ATATEG 135
Score = 220 bits (474), Expect = 8e-057
Identities = 96/118 (81%), Positives = 103/118 (87%)
Frame = -3 / +1
Query: 373 SWSPKIRLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMV 194
SWSP IRLRKSVTMRGRPSRR LGS P S A ++SGLRLCGSS VF RNS+ A GSMV
Sbjct: 160 SWSPNIRLRKSVTMRGRPSRRAILGSHPSCSLALVISGLRLCGSSWVFSRNSIRAFGSMV 339
Query: 193 SWTTLASSSMLNSPGLPRLNGPMCSPSMSFISPSTKSETY*KLLVCLPSP*TVKGSFL 20
SWTTLASSSM+NSPGLP+LNGPM SPS+S I+PSTKSETY KLLVCLPSP*TVKGSFL
Sbjct: 340 SWTTLASSSMVNSPGLPKLNGPM*SPSISLINPSTKSETYWKLLVCLPSP*TVKGSFL 513
Score = 157 bits (337), Expect = 6e-038
Identities = 68/121 (56%), Positives = 88/121 (72%)
Frame = -2 / +3
Query: 383 GGPFLVPEDTFAEVSDHAGKALTEGNLGLPAEELFRAADVRLALVRIICGVRTELDVRLW 204
GG LV E AEV +H G+A+TEG+LGLP + L D+ LALVR++ GV TELD R+
Sbjct: 150 GGAILVAEYPLAEVGNHEGEAVTEGDLGLPPKLLLGLGDIWLALVRVVLGVLTELDPRVR 329
Query: 203 VDGVLDHLSQLQHAEFSRVAEVERPNVLPFHELHQPFHQI*DILKAPSLLAITIDCQRLL 24
VDGVLD+L Q QH E + VA+VE PNV+ FH+ HQP +QI ++L+ P LLAI ++ QRLL
Sbjct: 330 VDGVLDNLGQFQHGELTGVAQVEWPNVITFHQPHQPLNQIRNVLETPGLLAIAVNRQRLL 509
Query: 23 P 21
P
Sbjct: 510 P 512
Score = 77.1 bits (162), Expect(2) = 2e-024
Identities = 37/87 (42%), Positives = 44/87 (50%)
Frame = +1 / -1
Query: 124 TLGRSTSATLENSACWSWLXXXXXXXXXXXXXXXXXXPQMIRTSASLTSAARKSSSAGSP 303
TLG ST AT +S CW+W P+ RTSAS S +S+ GSP
Sbjct: 409 TLGHSTWATPVSSPCWNWPRLSRTPSTRTRGSSSVRTPRTTRTSASQISPRPRSNLGGSP 230
Query: 304 RFPSVRAFPAWSLTSANVSSGTRKGPP 384
R PSV A P+W TSA+ S TR PP
Sbjct: 229 RSPSVTASPSWLPTSASGYSATRIAPP 149
Score = 55.1 bits (114), Expect(2) = 2e-024
Identities = 25/44 (56%), Positives = 28/44 (63%)
Frame = +2 / -2
Query: 20 EEGAFDSLW*WQAD*ELSICLRFGGRADEAHGRGAHWAVQPRQP 151
+EGAFD L WQAD E I FG DEA GR +HWA+Q QP
Sbjct: 513 KEGAFDGLRRWQADQEFPIRF*FG*GVDEADGR*SHWAIQLGQP 382
>gb|BU970828.1|BU970828 HB15M21r BC Hordeum vulgare subsp. vulgare cDNA clone HB15M21
5-PRIME, mRNA sequence
Length = 492
Score = 256 bits (554), Expect = 7e-068
Identities = 102/125 (81%), Positives = 113/125 (90%)
Frame = +3 / +2
Query: 24 KEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKVVQDTID 203
+EPLTVYGDGKQTRSFQYVSDLVEGLM+LMEG+HIGPFNLGNPGEF+MLELAKVVQDTID
Sbjct: 8 REPLTVYGDGKQTRSFQYVSDLVEGLMRLMEGDHIGPFNLGNPGEFTMLELAKVVQDTID 187
Query: 204 PEAHIEFRPNTADDPHKRKPDISRAKELLGWEPKVPLREGLPRMVTDFRKRIFGDQEGST 383
P A IEFR NT DDPHKRKPDI++AKE LGWEPK+ LR+GLP MVTDFRKRIFGDQ+ +
Sbjct: 188 PNARIEFRENTQDDPHKRKPDITKAKEQLGWEPKIALRDGLPLMVTDFRKRIFGDQDSAA 367
Query: 384 ESAGG 398
+ G
Sbjct: 368 TATEG 382
Score = 215 bits (465), Expect = 1e-055
Identities = 94/118 (79%), Positives = 102/118 (86%)
Frame = -3 / -1
Query: 373 SWSPKIRLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMV 194
SWSP IRLRKSVTMRGRPSRR LGS P S A ++SGLRLCGSS VF RNS+ A GSMV
Sbjct: 357 SWSPNIRLRKSVTMRGRPSRRAILGSHPSCSLALVISGLRLCGSSWVFSRNSIRAFGSMV 178
Query: 193 SWTTLASSSMLNSPGLPRLNGPMCSPSMSFISPSTKSETY*KLLVCLPSP*TVKGSFL 20
SWTTLASSSM+NSPGLP+LNGPM SPS+S I+PSTKSETY KLLVCLPSP*TVKGS +
Sbjct: 177 SWTTLASSSMVNSPGLPKLNGPM*SPSISLINPSTKSETYWKLLVCLPSP*TVKGSLV 4
Score = 154 bits (330), Expect = 6e-037
Identities = 67/119 (56%), Positives = 86/119 (72%)
Frame = -2 / -3
Query: 383 GGPFLVPEDTFAEVSDHAGKALTEGNLGLPAEELFRAADVRLALVRIICGVRTELDVRLW 204
GG LV E AEV +H G+A+TEG+LGLP E L D+ LALVR++ GV TELD R+
Sbjct: 367 GGAILVAEYPLAEVGNHEGEAVTEGDLGLPPELLLGLGDIWLALVRVVLGVLTELDPRVR 188
Query: 203 VDGVLDHLSQLQHAEFSRVAEVERPNVLPFHELHQPFHQI*DILKAPSLLAITIDCQRL 27
VDGVLD+L Q QH E + VA+VE PNV+ FH+ HQP +QI ++L+ P LLAI ++ QRL
Sbjct: 187 VDGVLDNLGQFQHGELTGVAQVEWPNVITFHQPHQPLNQIRNVLETPGLLAIAVNRQRL 11
>gb|BI958920.1|BI958920 HVSMEn0017D23f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0017D23f, mRNA sequence
Length = 648
Score = 252 bits (545), Expect = 1e-066
Identities = 103/127 (81%), Positives = 113/127 (88%)
Frame = +3 / -1
Query: 18 LRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKVVQDT 197
LRKE LTV GDGKQTRSFQYVSDLVEGLM+LMEG+HIGPFNLGNPGEF+MLELAKVVQDT
Sbjct: 645 LRKELLTV*GDGKQTRSFQYVSDLVEGLMRLMEGDHIGPFNLGNPGEFTMLELAKVVQDT 466
Query: 198 IDPEAHIEFRPNTADDPHKRKPDISRAKELLGWEPKVPLREGLPRMVTDFRKRIFGDQEG 377
IDP A IEFR NT DDPHKRKPDI++AKE LGWEPK+ LR+GLP MVTDFRKRIFGDQ+
Sbjct: 465 IDPNARIEFRENTQDDPHKRKPDITKAKEQLGWEPKIALRDGLPLMVTDFRKRIFGDQDS 286
Query: 378 STESAGG 398
+ + G
Sbjct: 285 AATATEG 265
Score = 217 bits (469), Expect = 4e-056
Identities = 95/119 (79%), Positives = 103/119 (86%)
Frame = -3 / +2
Query: 373 SWSPKIRLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMV 194
SWSP IRLRKSVTMRGRPSRR LGS P S A ++SGLRLCGSS VF RNS+ A GSMV
Sbjct: 290 SWSPNIRLRKSVTMRGRPSRRAILGSHPSCSLALVISGLRLCGSSWVFSRNSIRAFGSMV 469
Query: 193 SWTTLASSSMLNSPGLPRLNGPMCSPSMSFISPSTKSETY*KLLVCLPSP*TVKGSFLS 17
SWTTLASSSM+NSPGLP+LNGPM SPS+S I+PSTKSETY KLLVCLPSP*TVK SFL+
Sbjct: 470 SWTTLASSSMVNSPGLPKLNGPM*SPSISLINPSTKSETYWKLLVCLPSP*TVKSSFLN 646
Score = 155 bits (333), Expect = 2e-037
Identities = 67/121 (55%), Positives = 88/121 (72%)
Frame = -2 / +1
Query: 383 GGPFLVPEDTFAEVSDHAGKALTEGNLGLPAEELFRAADVRLALVRIICGVRTELDVRLW 204
GG LV E AEV +H G+A+TEG+LGLP + L D+ LALVR++ GV TELD R+
Sbjct: 280 GGAILVAEYPLAEVGNHEGEAVTEGDLGLPPKLLLGLGDIWLALVRVVLGVLTELDPRVR 459
Query: 203 VDGVLDHLSQLQHAEFSRVAEVERPNVLPFHELHQPFHQI*DILKAPSLLAITIDCQRLL 24
VDGVLD+L Q QH E + VA+VE PNV+ FH+ HQP +QI ++L+ P LLAI ++ Q+LL
Sbjct: 460 VDGVLDNLGQFQHGELTGVAQVEWPNVITFHQPHQPLNQIRNVLETPGLLAIALNRQKLL 639
Query: 23 P 21
P
Sbjct: 640 P 642
Score = 77.1 bits (162), Expect(2) = 1e-024
Identities = 37/87 (42%), Positives = 44/87 (50%)
Frame = +1 / -2
Query: 124 TLGRSTSATLENSACWSWLXXXXXXXXXXXXXXXXXXPQMIRTSASLTSAARKSSSAGSP 303
TLG ST AT +S CW+W P+ RTSAS S +S+ GSP
Sbjct: 539 TLGHSTWATPVSSPCWNWPRLSRTPSTRTRGSSSVRTPRTTRTSASQISPRPRSNLGGSP 360
Query: 304 RFPSVRAFPAWSLTSANVSSGTRKGPP 384
R PSV A P+W TSA+ S TR PP
Sbjct: 359 RSPSVTASPSWLPTSASGYSATRIAPP 279
Score = 55.6 bits (115), Expect(2) = 1e-024
Identities = 25/44 (56%), Positives = 28/44 (63%)
Frame = +2 / -3
Query: 20 EEGAFDSLW*WQAD*ELSICLRFGGRADEAHGRGAHWAVQPRQP 151
+EGAFD L WQAD E I FG DEA GR +HWA+Q QP
Sbjct: 643 KEGAFDGLGRWQADQEFPIRF*FG*GVDEADGR*SHWAIQLGQP 512
>gb|BJ548879.1|BJ548879 BJ548879 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal37k14 3', mRNA sequence
Length = 618
Score = 244 bits (527), Expect(2) = 2e-066
Identities = 97/119 (81%), Positives = 107/119 (89%)
Frame = +3 / -2
Query: 42 YGDGKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKVVQDTIDPEAHIE 221
YGDGKQTRSFQYVSDLVEGLM+LMEG+HIGPFNLGNPGEF+MLELAKVVQDTIDP A IE
Sbjct: 563 YGDGKQTRSFQYVSDLVEGLMRLMEGDHIGPFNLGNPGEFTMLELAKVVQDTIDPNARIE 384
Query: 222 FRPNTADDPHKRKPDISRAKELLGWEPKVPLREGLPRMVTDFRKRIFGDQEGSTESAGG 398
FR NT DDPHKRKPDI++AKE LGWEPK+ LR+GLP MVTDFRKRIFGDQ+ + + G
Sbjct: 383 FRENTQDDPHKRKPDITKAKEQLGWEPKIALRDGLPLMVTDFRKRIFGDQDSAATATEG 207
Score = 204 bits (440), Expect(2) = 5e-054
Identities = 89/111 (80%), Positives = 96/111 (86%)
Frame = -3 / +1
Query: 373 SWSPKIRLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMV 194
SWSP IRLRKSVTMRGRPSRR LGS P S A ++SGLRLCGSS VF RNS+ A GSMV
Sbjct: 232 SWSPNIRLRKSVTMRGRPSRRAILGSHPSCSLALVISGLRLCGSSWVFSRNSIRAFGSMV 411
Query: 193 SWTTLASSSMLNSPGLPRLNGPMCSPSMSFISPSTKSETY*KLLVCLPSP* 41
SWTTLASSSM+NSPGLP+LNGPM SPS+S I+PSTKSETY KLLVCLPSP*
Sbjct: 412 SWTTLASSSMVNSPGLPKLNGPM*SPSISLINPSTKSETYWKLLVCLPSP* 564
Score = 146 bits (314), Expect(2) = 1e-035
Identities = 63/114 (55%), Positives = 82/114 (71%)
Frame = -2 / +3
Query: 383 GGPFLVPEDTFAEVSDHAGKALTEGNLGLPAEELFRAADVRLALVRIICGVRTELDVRLW 204
GG LV E AEV +H G+A+TEG+LGLP + L D+ LALVR++ GV TELD R+
Sbjct: 222 GGAILVAEYPLAEVGNHEGEAVTEGDLGLPPKLLLGLGDIWLALVRVVLGVLTELDPRVR 401
Query: 203 VDGVLDHLSQLQHAEFSRVAEVERPNVLPFHELHQPFHQI*DILKAPSLLAITI 42
VDGVLD+L Q QH E + VA+VE PNV+ FH+ HQP +QI ++L+ P LLAI +
Sbjct: 402 VDGVLDNLGQFQHGELTGVAQVEWPNVITFHQPHQPLNQIRNVLETPGLLAIAV 563
Score = 28.6 bits (56), Expect(2) = 2e-066
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +3 / -1
Query: 6 VAQALRKEPLTV 41
VAQALRKEPLTV
Sbjct: 600 VAQALRKEPLTV 565
Score = 26.7 bits (52), Expect(2) = 5e-054
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = -3 / +2
Query: 40 TVKGSFLSA*AT 5
TVKGSFLSA*AT
Sbjct: 566 TVKGSFLSA*AT 601
Score = 22.6 bits (43), Expect(2) = 1e-035
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -1 / +3
Query: 36 SKAPSSAPEQ 7
SKAPS APEQ
Sbjct: 570 SKAPSLAPEQ 599
>gb|BF620279.2|BF620279 HVSMEc0019E20f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0019E20f, mRNA sequence
Length = 677
Score = 243 bits (525), Expect = 7e-064
Identities = 101/123 (82%), Positives = 109/123 (88%)
Frame = +3 / -3
Query: 6 VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKV 185
VAQALRKEPLTVYGDGKQTRSFQYVSDLVE L+KLME EH+GPFNLGNPGEF+MLELAKV
Sbjct: 525 VAQALRKEPLTVYGDGKQTRSFQYVSDLVERLIKLMEEEHVGPFNLGNPGEFTMLELAKV 346
Query: 186 VQDTIDPEAHIEFRPNTADDPHKRKPDISRAKELLGWEPKVPLREGLPRMVTDFRKRIFG 365
VQDTIDP A IEFR +T PHKR+PDI++AKELLGWEPKV LR GLP MV DF RIFG
Sbjct: 345 VQDTIDPNARIEFRADTTYSPHKREPDITKAKELLGWEPKVALRTGLPLMVQDFSTRIFG 166
Query: 366 DQE 374
DQ+
Sbjct: 165 DQK 157
Score = 188 bits (406), Expect = 2e-047
Identities = 86/122 (70%), Positives = 95/122 (77%)
Frame = -3 / +2
Query: 370 WSPKIRLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMVS 191
WSPK+R+ KS TM GRP R TLGS P SS A +MSG RLCG V RNS+ A GSMVS
Sbjct: 161 WSPKMRVLKSWTMSGRPVRSATLGSHPSSSLALVMSGSRLCGL*VVSARNSILALGSMVS 340
Query: 190 WTTLASSSMLNSPGLPRLNGPMCSPSMSFISPSTKSETY*KLLVCLPSP*TVKGSFLSA* 11
TTLASSS++NSPG PRLNGP CS S+S IS ST+SETY KLLVCLPSP TV+GSFLSA
Sbjct: 341 CTTLASSSIVNSPGFPRLNGPTCSSSISLISRSTRSETYWKLLVCLPSPYTVRGSFLSAW 520
Query: 10 AT 5
AT
Sbjct: 521 AT 526
Score = 133 bits (284), Expect = 1e-030
Identities = 64/122 (52%), Positives = 81/122 (66%)
Frame = -2 / +1
Query: 371 LVPEDTFAEVSDHAGKALTEGNLGLPAEELFRAADVRLALVRIICGVRTELDVRLWVDGV 192
LV ++ AEV DH +A E +LGLP E+L DVRLALVR + GV ELD + VDGV
Sbjct: 160 LVAKNAGAEVLDHEREACPERHLGLPPEQLLGLGDVRLALVRAVGGVGPELDPCVGVDGV 339
Query: 191 LDHLSQLQHAEFSRVAEVERPNVLPFHELHQPFHQI*DILKAPSLLAITIDCQRLLPQRL 12
L HL QLQH E RV +VER +VL H+L QP +QI D+L+AP LLA+ + LLP+ L
Sbjct: 340 LHHLGQLQHRELPRVPQVERAHVLLLHQLDQPLNQIGDVLEAPRLLAVAVHR*GLLPKCL 519
Query: 11 SN 6
+
Sbjct: 520 GD 525
>gb|AV909217.1|AV909217 AV909217 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak12a20 5', mRNA sequence
Length = 630
Score = 240 bits (519), Expect = 5e-063
Identities = 96/121 (79%), Positives = 110/121 (90%)
Frame = +3 / +2
Query: 6 VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKV 185
VAQALRK P+TVYGDGKQTRSFQYVSDLV GLM LME +HIGPFNLGNPGEF+MLELA+V
Sbjct: 29 VAQALRKHPMTVYGDGKQTRSFQYVSDLVAGLMALMESDHIGPFNLGNPGEFTMLELAEV 208
Query: 186 VQDTIDPEAHIEFRPNTADDPHKRKPDISRAKELLGWEPKVPLREGLPRMVTDFRKRIFG 365
V++TIDP + IEF+PNTADDPH RKPDI++AK++LGWEPKV L+EGLP MVTDFRKRI
Sbjct: 209 VKETIDPMSTIEFKPNTADDPHMRKPDITKAKQMLGWEPKVSLKEGLPLMVTDFRKRILD 388
Query: 366 D 368
+
Sbjct: 389 E 391
Score = 156 bits (336), Expect = 8e-038
Identities = 74/122 (60%), Positives = 90/122 (73%)
Frame = -3 / -1
Query: 370 WSPKIRLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMVS 191
+S KI LRKSVT++GRPS R T GSQP FA ++SG + GSSAV G NS+ GS+VS
Sbjct: 393 YSSKILLRKSVTIKGRPSLRDTFGSQPSICFALVISGFLIWGSSAVLGLNSIVDIGSIVS 214
Query: 190 WTTLASSSMLNSPGLPRLNGPMCSPSMSFISPSTKSETY*KLLVCLPSP*TVKGSFLSA* 11
+TT ASS+M+NSPG PRL GP+ S S+ I+P+T+SETY*KL VC PSP TV G SA
Sbjct: 213 FTTSASSNMVNSPGFPRLKGPI*SLSIRAINPATRSETY*KLRVCFPSPYTVIGCLRSAC 34
Query: 10 AT 5
AT
Sbjct: 33 AT 28
Score = 101 bits (216), Expect = 3e-021
Identities = 51/124 (41%), Positives = 71/124 (57%)
Frame = -2 / -3
Query: 377 PFLVPEDTFAEVSDHAGKALTEGNLGLPAEELFRAADVRLALVRIICGVRTELDVRLWVD 198
P L+ +D FAE+ H GKA + L LP L R ++ L+ + II V E + WVD
Sbjct: 400 P*LLIQDPFAEICHHQGKAFLKRYLWLPT*HLLRLGNIGLSHMGIISCVGLEFNC*HWVD 221
Query: 197 GVLDHLSQLQHAEFSRVAEVERPNVLPFHELHQPFHQI*DILKAPSLLAITIDCQRLLPQ 18
L +L + QH E SRV+ +ER N++ H+ HQ +QI +ILK SL +ITI C + Q
Sbjct: 220 CFLHNLCKFQHGELSRVS*IERANMITLHQSHQSSNQIRNILKTSSLFSITIYCHWMFAQ 41
Query: 17 RLSN 6
L N
Sbjct: 40 CLCN 29
>gb|AV911101.1|AV911101 AV911101 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak12a20 3', mRNA sequence
Length = 680
Score = 240 bits (519), Expect = 5e-063
Identities = 96/121 (79%), Positives = 110/121 (90%)
Frame = +3 / -2
Query: 6 VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKV 185
VAQALRK P+TVYGDGKQTRSFQYVSDLV GLM LME +HIGPFNLGNPGEF+MLELA+V
Sbjct: 661 VAQALRKHPMTVYGDGKQTRSFQYVSDLVAGLMALMESDHIGPFNLGNPGEFTMLELAEV 482
Query: 186 VQDTIDPEAHIEFRPNTADDPHKRKPDISRAKELLGWEPKVPLREGLPRMVTDFRKRIFG 365
V++TIDP + IEF+PNTADDPH RKPDI++AK++LGWEPKV L+EGLP MVTDFRKRI
Sbjct: 481 VKETIDPMSTIEFKPNTADDPHMRKPDITKAKQMLGWEPKVSLKEGLPLMVTDFRKRILD 302
Query: 366 D 368
+
Sbjct: 301 E 299
Score = 156 bits (336), Expect = 8e-038
Identities = 74/122 (60%), Positives = 90/122 (73%)
Frame = -3 / +3
Query: 370 WSPKIRLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMVS 191
+S KI LRKSVT++GRPS R T GSQP FA ++SG + GSSAV G NS+ GS+VS
Sbjct: 297 YSSKILLRKSVTIKGRPSLRDTFGSQPSICFALVISGFLIWGSSAVLGLNSIVDIGSIVS 476
Query: 190 WTTLASSSMLNSPGLPRLNGPMCSPSMSFISPSTKSETY*KLLVCLPSP*TVKGSFLSA* 11
+TT ASS+M+NSPG PRL GP+ S S+ I+P+T+SETY*KL VC PSP TV G SA
Sbjct: 477 FTTSASSNMVNSPGFPRLKGPI*SLSIRAINPATRSETY*KLRVCFPSPYTVIGCLRSAC 656
Query: 10 AT 5
AT
Sbjct: 657 AT 662
Score = 101 bits (216), Expect = 3e-021
Identities = 51/124 (41%), Positives = 71/124 (57%)
Frame = -2 / +2
Query: 377 PFLVPEDTFAEVSDHAGKALTEGNLGLPAEELFRAADVRLALVRIICGVRTELDVRLWVD 198
P L+ +D FAE+ H GKA + L LP L R ++ L+ + II V E + WVD
Sbjct: 290 P*LLIQDPFAEICHHQGKAFLKRYLWLPT*HLLRLGNIGLSHMGIISCVGLEFNC*HWVD 469
Query: 197 GVLDHLSQLQHAEFSRVAEVERPNVLPFHELHQPFHQI*DILKAPSLLAITIDCQRLLPQ 18
L +L + QH E SRV+ +ER N++ H+ HQ +QI +ILK SL +ITI C + Q
Sbjct: 470 CFLHNLCKFQHGELSRVS*IERANMITLHQSHQSSNQIRNILKTSSLFSITIYCHWMFAQ 649
Query: 17 RLSN 6
L N
Sbjct: 650 CLCN 661
>gb|BJ477449.1|BJ477449 BJ477449 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal41g23 3', mRNA sequence
Length = 679
Score = 240 bits (519), Expect = 5e-063
Identities = 96/121 (79%), Positives = 110/121 (90%)
Frame = +3 / -1
Query: 6 VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKV 185
VAQALRK P+TVYGDGKQTRSFQYVSDLV GLM LME +HIGPFNLGNPGEF+MLELA+V
Sbjct: 661 VAQALRKHPMTVYGDGKQTRSFQYVSDLVAGLMALMESDHIGPFNLGNPGEFTMLELAEV 482
Query: 186 VQDTIDPEAHIEFRPNTADDPHKRKPDISRAKELLGWEPKVPLREGLPRMVTDFRKRIFG 365
V++TIDP + IEF+PNTADDPH RKPDI++AK++LGWEPKV L+EGLP MVTDFRKRI
Sbjct: 481 VKETIDPMSTIEFKPNTADDPHMRKPDITKAKQMLGWEPKVSLKEGLPLMVTDFRKRILD 302
Query: 366 D 368
+
Sbjct: 301 E 299
Score = 156 bits (336), Expect = 8e-038
Identities = 74/122 (60%), Positives = 90/122 (73%)
Frame = -3 / +3
Query: 370 WSPKIRLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMVS 191
+S KI LRKSVT++GRPS R T GSQP FA ++SG + GSSAV G NS+ GS+VS
Sbjct: 297 YSSKILLRKSVTIKGRPSLRDTFGSQPSICFALVISGFLIWGSSAVLGLNSIVDIGSIVS 476
Query: 190 WTTLASSSMLNSPGLPRLNGPMCSPSMSFISPSTKSETY*KLLVCLPSP*TVKGSFLSA* 11
+TT ASS+M+NSPG PRL GP+ S S+ I+P+T+SETY*KL VC PSP TV G SA
Sbjct: 477 FTTSASSNMVNSPGFPRLKGPI*SLSIRAINPATRSETY*KLRVCFPSPYTVIGCLRSAC 656
Query: 10 AT 5
AT
Sbjct: 657 AT 662
Score = 101 bits (216), Expect = 3e-021
Identities = 51/124 (41%), Positives = 71/124 (57%)
Frame = -2 / +2
Query: 377 PFLVPEDTFAEVSDHAGKALTEGNLGLPAEELFRAADVRLALVRIICGVRTELDVRLWVD 198
P L+ +D FAE+ H GKA + L LP L R ++ L+ + II V E + WVD
Sbjct: 290 P*LLIQDPFAEICHHQGKAFLKRYLWLPT*HLLRLGNIGLSHMGIISCVGLEFNC*HWVD 469
Query: 197 GVLDHLSQLQHAEFSRVAEVERPNVLPFHELHQPFHQI*DILKAPSLLAITIDCQRLLPQ 18
L +L + QH E SRV+ +ER N++ H+ HQ +QI +ILK SL +ITI C + Q
Sbjct: 470 CFLHNLCKFQHGELSRVS*IERANMITLHQSHQSSNQIRNILKTSSLFSITIYCHWMFAQ 649
Query: 17 RLSN 6
L N
Sbjct: 650 CLCN 661
>gb|BU982278.1|BU982278 HA26A18r HA Hordeum vulgare subsp. vulgare cDNA clone HA26A18
5-PRIME, mRNA sequence
Length = 565
Score = 240 bits (519), Expect = 5e-063
Identities = 96/121 (79%), Positives = 110/121 (90%)
Frame = +3 / +3
Query: 6 VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKV 185
VAQALRK P+TVYGDGKQTRSFQYVSDLV GLM LME +HIGPFNLGNPGEF+MLELA+V
Sbjct: 117 VAQALRKHPMTVYGDGKQTRSFQYVSDLVAGLMALMESDHIGPFNLGNPGEFTMLELAEV 296
Query: 186 VQDTIDPEAHIEFRPNTADDPHKRKPDISRAKELLGWEPKVPLREGLPRMVTDFRKRIFG 365
V++TIDP + IEF+PNTADDPH RKPDI++AK++LGWEPKV L+EGLP MVTDFRKRI
Sbjct: 297 VKETIDPMSTIEFKPNTADDPHMRKPDITKAKQMLGWEPKVSLKEGLPLMVTDFRKRILD 476
Query: 366 D 368
+
Sbjct: 477 E 479
Score = 156 bits (336), Expect = 8e-038
Identities = 74/122 (60%), Positives = 90/122 (73%)
Frame = -3 / -1
Query: 370 WSPKIRLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMVS 191
+S KI LRKSVT++GRPS R T GSQP FA ++SG + GSSAV G NS+ GS+VS
Sbjct: 481 YSSKILLRKSVTIKGRPSLRDTFGSQPSICFALVISGFLIWGSSAVLGLNSIVDIGSIVS 302
Query: 190 WTTLASSSMLNSPGLPRLNGPMCSPSMSFISPSTKSETY*KLLVCLPSP*TVKGSFLSA* 11
+TT ASS+M+NSPG PRL GP+ S S+ I+P+T+SETY*KL VC PSP TV G SA
Sbjct: 301 FTTSASSNMVNSPGFPRLKGPI*SLSIRAINPATRSETY*KLRVCFPSPYTVIGCLRSAC 122
Query: 10 AT 5
AT
Sbjct: 121 AT 116
Score = 101 bits (216), Expect = 3e-021
Identities = 51/124 (41%), Positives = 71/124 (57%)
Frame = -2 / -3
Query: 377 PFLVPEDTFAEVSDHAGKALTEGNLGLPAEELFRAADVRLALVRIICGVRTELDVRLWVD 198
P L+ +D FAE+ H GKA + L LP L R ++ L+ + II V E + WVD
Sbjct: 488 P*LLIQDPFAEICHHQGKAFLKRYLWLPT*HLLRLGNIGLSHMGIISCVGLEFNC*HWVD 309
Query: 197 GVLDHLSQLQHAEFSRVAEVERPNVLPFHELHQPFHQI*DILKAPSLLAITIDCQRLLPQ 18
L +L + QH E SRV+ +ER N++ H+ HQ +QI +ILK SL +ITI C + Q
Sbjct: 308 CFLHNLCKFQHGELSRVS*IERANMITLHQSHQSSNQIRNILKTSSLFSITIYCHWMFAQ 129
Query: 17 RLSN 6
L N
Sbjct: 128 CLCN 117
>gb|BQ757608.1|BQ757608 EBem10_SQ004_K13_R embryo, 2 Day germination, no treatment, cv
Optic, EBem10 Hordeum vulgare subsp. vulgare cDNA clone
EBem10_SQ004_K13 5', mRNA sequence
Length = 479
Score = 238 bits (514), Expect = 2e-062
Identities = 95/117 (81%), Positives = 105/117 (89%)
Frame = +3 / +3
Query: 48 DGKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKVVQDTIDPEAHIEFR 227
DGKQTRSFQYVSDLVEGLM+LMEG+HIGPFNLGNPGEF+MLELAKVVQDTIDP A IEFR
Sbjct: 3 DGKQTRSFQYVSDLVEGLMRLMEGDHIGPFNLGNPGEFTMLELAKVVQDTIDPNARIEFR 182
Query: 228 PNTADDPHKRKPDISRAKELLGWEPKVPLREGLPRMVTDFRKRIFGDQEGSTESAGG 398
NT DDPHKRKPDI++AKE LGWEPK+ LR+GLP MVTDFRKRIFGDQ+ + + G
Sbjct: 183 ENTQDDPHKRKPDITKAKEQLGWEPKIALRDGLPLMVTDFRKRIFGDQDSAATATEG 353
Score = 200 bits (432), Expect = 5e-051
Identities = 87/109 (79%), Positives = 94/109 (86%)
Frame = -3 / -2
Query: 373 SWSPKIRLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMV 194
SWSP IRLRKSVTMRGRPSRR LGS P S A ++SGLRLCGSS VF RNS+ A GSMV
Sbjct: 328 SWSPNIRLRKSVTMRGRPSRRAILGSHPSCSLALVISGLRLCGSSWVFSRNSIRAFGSMV 149
Query: 193 SWTTLASSSMLNSPGLPRLNGPMCSPSMSFISPSTKSETY*KLLVCLPS 47
SWTTLASSSM+NSPGLP+LNGPM SPS+S I+PSTKSETY KLLVCLPS
Sbjct: 148 SWTTLASSSMVNSPGLPKLNGPM*SPSISLINPSTKSETYWKLLVCLPS 2
Score = 147 bits (315), Expect = 7e-035
Identities = 64/112 (57%), Positives = 81/112 (72%)
Frame = -2 / -1
Query: 383 GGPFLVPEDTFAEVSDHAGKALTEGNLGLPAEELFRAADVRLALVRIICGVRTELDVRLW 204
GG LV E AEV +H G+A+TEG+LGLP E L D+ LALVR++ GV TELD R+
Sbjct: 338 GGAILVAEYPLAEVGNHEGEAVTEGDLGLPPELLLGLGDIWLALVRVVLGVLTELDPRVR 159
Query: 203 VDGVLDHLSQLQHAEFSRVAEVERPNVLPFHELHQPFHQI*DILKAPSLLAI 48
VDGVLD+L Q QH E + VA+VE PNV+ FH+ HQP +QI ++L+ P LLAI
Sbjct: 158 VDGVLDNLGQFQHGELTGVAQVEWPNVITFHQPHQPLNQIGNVLETPGLLAI 3
Score = 79.9 bits (168), Expect(2) = 4e-023
Identities = 38/87 (43%), Positives = 45/87 (51%)
Frame = +1 / +1
Query: 124 TLGRSTSATLENSACWSWLXXXXXXXXXXXXXXXXXXPQMIRTSASLTSAARKSSSAGSP 303
TLG ST AT +S CW+W P+ RTSAS S +S+S GSP
Sbjct: 79 TLGHSTWATPVSSPCWNWPRLSRTPSTRTRGSSSVRTPRTTRTSASQISPRPRSNSGGSP 258
Query: 304 RFPSVRAFPAWSLTSANVSSGTRKGPP 384
R PSV A P+W TSA+ S TR PP
Sbjct: 259 RSPSVTASPSWLPTSASGYSATRIAPP 339
Score = 47.8 bits (98), Expect(2) = 4e-023
Identities = 20/34 (58%), Positives = 22/34 (64%)
Frame = +2 / +2
Query: 50 WQAD*ELSICLRFGGRADEAHGRGAHWAVQPRQP 151
WQAD E I RFG DEA GR +HWA+Q QP
Sbjct: 5 WQADQEFPIRFRFG*GVDEADGR*SHWAIQLGQP 106
>gb|CV062330.1|CV062330 BNEL78h1 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL78h1 5' similar to UDP-glucuronic
acid decarboxylase, mRNA sequence
Length = 563
Score = 235 bits (508), Expect = 2e-061
Identities = 94/116 (81%), Positives = 104/116 (89%)
Frame = +3 / +1
Query: 51 GKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKVVQDTIDPEAHIEFRP 230
GKQTRSFQYVSDLVEGLM+LMEG+HIGPFNLGNPGEF+MLELAKVVQDTIDP A IEFR
Sbjct: 1 GKQTRSFQYVSDLVEGLMRLMEGDHIGPFNLGNPGEFTMLELAKVVQDTIDPNARIEFRE 180
Query: 231 NTADDPHKRKPDISRAKELLGWEPKVPLREGLPRMVTDFRKRIFGDQEGSTESAGG 398
NT DDPHKRKPDI++AKE LGWEPK+ LR+GLP MVTDFRKRIFGDQ+ + + G
Sbjct: 181 NTQDDPHKRKPDITKAKEQLGWEPKIALRDGLPLMVTDFRKRIFGDQDSAATATEG 348
Score = 198 bits (427), Expect = 2e-050
Identities = 86/107 (80%), Positives = 93/107 (86%)
Frame = -3 / -1
Query: 373 SWSPKIRLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMV 194
SWSP IRLRKSVTMRGRPSRR LGS P SFA ++SGLRLCGSS VF RNS+ A GSMV
Sbjct: 323 SWSPNIRLRKSVTMRGRPSRRAILGSHPSCSFALVISGLRLCGSSWVFSRNSIRAFGSMV 144
Query: 193 SWTTLASSSMLNSPGLPRLNGPMCSPSMSFISPSTKSETY*KLLVCL 53
SWTTLASSSM+NSPGLP+LNGPM SPS+S I+PSTKSETY KLLVCL
Sbjct: 143 SWTTLASSSMVNSPGLPKLNGPM*SPSISLINPSTKSETYWKLLVCL 3
Score = 144 bits (310), Expect = 3e-034
Identities = 63/111 (56%), Positives = 80/111 (72%)
Frame = -2 / -3
Query: 383 GGPFLVPEDTFAEVSDHAGKALTEGNLGLPAEELFRAADVRLALVRIICGVRTELDVRLW 204
GG LV E AEV +H G+A+TEG+LGLP E L D+ LALVR++ GV TELD R+
Sbjct: 333 GGAILVAEYPLAEVGNHEGEAVTEGDLGLPPELLLCLGDIWLALVRVVLGVLTELDPRVR 154
Query: 203 VDGVLDHLSQLQHAEFSRVAEVERPNVLPFHELHQPFHQI*DILKAPSLLA 51
VDGVLD+L Q QH E + VA+VE PNV+ FH+ HQP +QI ++L+ P LLA
Sbjct: 153 VDGVLDNLGQFQHGELTGVAQVEWPNVITFHQPHQPLNQIRNVLETPGLLA 1
Score = 81.3 bits (171), Expect(2) = 7e-021
Identities = 38/87 (43%), Positives = 46/87 (52%)
Frame = +1 / +2
Query: 124 TLGRSTSATLENSACWSWLXXXXXXXXXXXXXXXXXXPQMIRTSASLTSAARKSSSAGSP 303
TLG ST AT +S CW+W P+ RTSAS S ++S+S GSP
Sbjct: 74 TLGHSTWATPVSSPCWNWPRLSRTPSTRTRGSSSVRTPRTTRTSASQISPRQRSNSGGSP 253
Query: 304 RFPSVRAFPAWSLTSANVSSGTRKGPP 384
R PSV A P+W TSA+ S TR PP
Sbjct: 254 RSPSVTASPSWLPTSASGYSATRIAPP 334
Score = 38.6 bits (78), Expect(2) = 7e-021
Identities = 18/33 (54%), Positives = 20/33 (60%)
Frame = +2 / +3
Query: 53 QAD*ELSICLRFGGRADEAHGRGAHWAVQPRQP 151
QAD E I FG DEA GR +HWA+Q QP
Sbjct: 3 QADQEFPIRF*FG*GVDEADGR*SHWAIQLGQP 101
>gb|CV063225.1|CV063225 BNEL88a10 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL88a10 5' similar to dTDP-glucose
4-6-dehydratase-like protein, mRNA sequence
Length = 622
Score = 235 bits (508), Expect = 2e-061
Identities = 94/116 (81%), Positives = 104/116 (89%)
Frame = +3 / +1
Query: 51 GKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKVVQDTIDPEAHIEFRP 230
GKQTRSFQYVSDLVEGLM+LMEG+HIGPFNLGNPGEF+MLELAKVVQDTIDP A IEFR
Sbjct: 1 GKQTRSFQYVSDLVEGLMRLMEGDHIGPFNLGNPGEFTMLELAKVVQDTIDPNARIEFRE 180
Query: 231 NTADDPHKRKPDISRAKELLGWEPKVPLREGLPRMVTDFRKRIFGDQEGSTESAGG 398
NT DDPHKRKPDI++AKE LGWEPK+ LR+GLP MVTDFRKRIFGDQ+ + + G
Sbjct: 181 NTQDDPHKRKPDITKAKEQLGWEPKIALRDGLPLMVTDFRKRIFGDQDSAATATEG 348
Score = 198 bits (427), Expect = 2e-050
Identities = 86/107 (80%), Positives = 93/107 (86%)
Frame = -3 / -3
Query: 373 SWSPKIRLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMV 194
SWSP IRLRKSVTMRGRPSRR LGS P SFA ++SGLRLCGSS VF RNS+ A GSMV
Sbjct: 323 SWSPNIRLRKSVTMRGRPSRRAILGSHPSCSFALVISGLRLCGSSWVFSRNSIRAFGSMV 144
Query: 193 SWTTLASSSMLNSPGLPRLNGPMCSPSMSFISPSTKSETY*KLLVCL 53
SWTTLASSSM+NSPGLP+LNGPM SPS+S I+PSTKSETY KLLVCL
Sbjct: 143 SWTTLASSSMVNSPGLPKLNGPM*SPSISLINPSTKSETYWKLLVCL 3
Score = 144 bits (310), Expect = 3e-034
Identities = 63/111 (56%), Positives = 80/111 (72%)
Frame = -2 / -2
Query: 383 GGPFLVPEDTFAEVSDHAGKALTEGNLGLPAEELFRAADVRLALVRIICGVRTELDVRLW 204
GG LV E AEV +H G+A+TEG+LGLP E L D+ LALVR++ GV TELD R+
Sbjct: 333 GGAILVAEYPLAEVGNHEGEAVTEGDLGLPPELLLCLGDIWLALVRVVLGVLTELDPRVR 154
Query: 203 VDGVLDHLSQLQHAEFSRVAEVERPNVLPFHELHQPFHQI*DILKAPSLLA 51
VDGVLD+L Q QH E + VA+VE PNV+ FH+ HQP +QI ++L+ P LLA
Sbjct: 153 VDGVLDNLGQFQHGELTGVAQVEWPNVITFHQPHQPLNQIRNVLETPGLLA 1
Score = 81.3 bits (171), Expect(2) = 7e-021
Identities = 38/87 (43%), Positives = 46/87 (52%)
Frame = +1 / +2
Query: 124 TLGRSTSATLENSACWSWLXXXXXXXXXXXXXXXXXXPQMIRTSASLTSAARKSSSAGSP 303
TLG ST AT +S CW+W P+ RTSAS S ++S+S GSP
Sbjct: 74 TLGHSTWATPVSSPCWNWPRLSRTPSTRTRGSSSVRTPRTTRTSASQISPRQRSNSGGSP 253
Query: 304 RFPSVRAFPAWSLTSANVSSGTRKGPP 384
R PSV A P+W TSA+ S TR PP
Sbjct: 254 RSPSVTASPSWLPTSASGYSATRIAPP 334
Score = 38.6 bits (78), Expect(2) = 7e-021
Identities = 18/33 (54%), Positives = 20/33 (60%)
Frame = +2 / +3
Query: 53 QAD*ELSICLRFGGRADEAHGRGAHWAVQPRQP 151
QAD E I FG DEA GR +HWA+Q QP
Sbjct: 3 QADQEFPIRF*FG*GVDEADGR*SHWAIQLGQP 101
>gb|BF256948.2|BF256948 HVSMEf0011H06f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0011H06f, mRNA sequence
Length = 538
Score = 235 bits (507), Expect = 2e-061
Identities = 99/131 (75%), Positives = 108/131 (82%)
Frame = +3 / +1
Query: 6 VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKV 185
VAQALRKEP+TVY DG QTRSFQYVSDLVEGLMKLME +HI PFNLG PGEF+MLEL KV
Sbjct: 40 VAQALRKEPMTVYCDG*QTRSFQYVSDLVEGLMKLMECDHIEPFNLGYPGEFTMLELDKV 219
Query: 186 VQDTIDPEAHIEFRPNTADDPHKRKPDISRAKELLGWEPKVPLREGLPRMVTDFRKRIFG 365
VQDTIDP A IEFR NT DDPH RKPDI++ E LGWEPK+ LR+GLP M TDFRKRIFG
Sbjct: 220 VQDTIDPNALIEFRENTQDDPHNRKPDITKDMEQLGWEPKIALRDGLPLMDTDFRKRIFG 399
Query: 366 DQEGSTESAGG 398
DQ+ + G
Sbjct: 400 DQDSAATDTEG 432
Score = 193 bits (416), Expect = 8e-049
Identities = 94/136 (69%), Positives = 104/136 (76%)
Frame = -3 / -3
Query: 412 ST*ERPPADSVDPSWSPKIRLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAV 233
ST P SWSP IRLRKSV+MRGRPSRR LGS P S + ++SGLRL GSS V
Sbjct: 446 STLHWPSVSVAALSWSPNIRLRKSVSMRGRPSRRAILGSHPSCSMSLVISGLRL*GSSWV 267
Query: 232 FGRNSMCASGSMVSWTTLASSSMLNSPGLPRLNGPMCSPSMSFISPSTKSETY*KLLVCL 53
F RNS+ A GSMVS TTL+SSSM+NSPG P+LNG M S S+SFI+PSTKSETY KLLVC
Sbjct: 266 FSRNSISAFGSMVSCTTLSSSSMVNSPG*PKLNGSM*SHSISFINPSTKSETYWKLLVC* 87
Query: 52 PSP*TVKGSFLSA*AT 5
PS *TV GSFLSA*AT
Sbjct: 86 PSQ*TVIGSFLSA*AT 39
Score = 156 bits (335), Expect = 1e-037
Identities = 71/126 (56%), Positives = 90/126 (71%)
Frame = -2 / -2
Query: 383 GGPFLVPEDTFAEVSDHAGKALTEGNLGLPAEELFRAADVRLALVRIICGVRTELDVRLW 204
GG LV E AEV H G+A+TEG+LGLP + L D+ LA+VR++ GV TELD R+
Sbjct: 417 GGAILVAEYPLAEVGIHEGEAVTEGDLGLPPKLLHVLGDIWLAIVRVVLGVLTELDQRVR 238
Query: 203 VDGVLDHLSQLQHAEFSRVAEVERPNVLPFHELHQPFHQI*DILKAPSLLAITIDCQRLL 24
VDGVL +L Q QH E S VA+VE NV+ FH+LHQP +QI ++L+ P LLAIT++ RLL
Sbjct: 237 VDGVLHNLVQFQHGELSGVAQVEWLNVITFHQLHQPLNQIRNVLETPGLLAITVNRHRLL 58
Query: 23 PQRLSN 6
P RLSN
Sbjct: 57 P*RLSN 40
>gb|BJ546155.1|BJ546155 BJ546155 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak34f15 3', mRNA sequence
Length = 555
Score = 232 bits (502), Expect = 1e-060
Identities = 93/115 (80%), Positives = 103/115 (89%)
Frame = +3 / -3
Query: 54 KQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKVVQDTIDPEAHIEFRPN 233
KQTRSFQYVSDLVEGLM+LMEG+HIGPFNLGNPGEF+MLELAKVVQDTIDP A IEFR N
Sbjct: 553 KQTRSFQYVSDLVEGLMRLMEGDHIGPFNLGNPGEFTMLELAKVVQDTIDPNARIEFREN 374
Query: 234 TADDPHKRKPDISRAKELLGWEPKVPLREGLPRMVTDFRKRIFGDQEGSTESAGG 398
T DDPHKRKPDI++AKE LGWEPK+ LR+GLP MVTDFRKRIFGDQ+ + + G
Sbjct: 373 TQDDPHKRKPDITKAKEQLGWEPKIALRDGLPLMVTDFRKRIFGDQDSAATATEG 209
Score = 195 bits (421), Expect = 2e-049
Identities = 85/107 (79%), Positives = 92/107 (85%)
Frame = -3 / +3
Query: 373 SWSPKIRLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMV 194
SWSP IRLRKSVTMRGRPSRR LGS P S A ++SGLRLCGSS VF RNS+ A GSMV
Sbjct: 234 SWSPNIRLRKSVTMRGRPSRRAILGSHPSCSLALVISGLRLCGSSWVFSRNSIRAFGSMV 413
Query: 193 SWTTLASSSMLNSPGLPRLNGPMCSPSMSFISPSTKSETY*KLLVCL 53
SWTTLASSSM+NSPGLP+LNGPM SPS+S I+PSTKSETY KLLVCL
Sbjct: 414 SWTTLASSSMVNSPGLPKLNGPM*SPSISLINPSTKSETYWKLLVCL 554
Score = 141 bits (303), Expect = 3e-033
Identities = 61/110 (55%), Positives = 79/110 (71%)
Frame = -2 / +2
Query: 383 GGPFLVPEDTFAEVSDHAGKALTEGNLGLPAEELFRAADVRLALVRIICGVRTELDVRLW 204
GG LV E AEV +H G+A+TEG+LGLP + L D+ LALVR++ GV TELD R+
Sbjct: 224 GGAILVAEYPLAEVGNHEGEAVTEGDLGLPPKLLLGLGDIWLALVRVVLGVLTELDPRVR 403
Query: 203 VDGVLDHLSQLQHAEFSRVAEVERPNVLPFHELHQPFHQI*DILKAPSLL 54
VDGVLD+L Q QH E + VA+VE PNV+ FH+ HQP +QI ++L+ P LL
Sbjct: 404 VDGVLDNLGQFQHGELTGVAQVEWPNVITFHQPHQPLNQIRNVLETPGLL 553
>gb|AV911559.1|AV911559 AV911559 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak13i23 3', mRNA sequence
Length = 551
Score = 230 bits (497), Expect = 5e-060
Identities = 92/114 (80%), Positives = 102/114 (89%)
Frame = +3 / -2
Query: 57 QTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKVVQDTIDPEAHIEFRPNT 236
QTRSFQYVSDLVEGLM+LMEG+HIGPFNLGNPGEF+MLELAKVVQDTIDP A IEFR NT
Sbjct: 550 QTRSFQYVSDLVEGLMRLMEGDHIGPFNLGNPGEFTMLELAKVVQDTIDPNARIEFRENT 371
Query: 237 ADDPHKRKPDISRAKELLGWEPKVPLREGLPRMVTDFRKRIFGDQEGSTESAGG 398
DDPHKRKPDI++AKE LGWEPK+ LR+GLP MVTDFRKRIFGDQ+ + + G
Sbjct: 370 QDDPHKRKPDITKAKEQLGWEPKIALRDGLPLMVTDFRKRIFGDQDSAATATEG 209
Score = 193 bits (417), Expect = 6e-049
Identities = 84/106 (79%), Positives = 91/106 (85%)
Frame = -3 / +3
Query: 373 SWSPKIRLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMV 194
SWSP IRLRKSVTMRGRPSRR LGS P S A ++SGLRLCGSS VF RNS+ A GSMV
Sbjct: 234 SWSPNIRLRKSVTMRGRPSRRAILGSHPSCSLALVISGLRLCGSSWVFSRNSIRAFGSMV 413
Query: 193 SWTTLASSSMLNSPGLPRLNGPMCSPSMSFISPSTKSETY*KLLVC 56
SWTTLASSSM+NSPGLP+LNGPM SPS+S I+PSTKSETY KLLVC
Sbjct: 414 SWTTLASSSMVNSPGLPKLNGPM*SPSISLINPSTKSETYWKLLVC 551
Score = 139 bits (299), Expect = 1e-032
Identities = 60/109 (55%), Positives = 78/109 (71%)
Frame = -2 / +2
Query: 383 GGPFLVPEDTFAEVSDHAGKALTEGNLGLPAEELFRAADVRLALVRIICGVRTELDVRLW 204
GG LV E AEV +H G+A+TEG+LGLP + L D+ LALVR++ GV TELD R+
Sbjct: 224 GGAILVAEYPLAEVGNHEGEAVTEGDLGLPPKLLLGLGDIWLALVRVVLGVLTELDPRVR 403
Query: 203 VDGVLDHLSQLQHAEFSRVAEVERPNVLPFHELHQPFHQI*DILKAPSL 57
VDGVLD+L Q QH E + VA+VE PNV+ FH+ HQP +QI ++L+ P L
Sbjct: 404 VDGVLDNLGQFQHGELTGVAQVEWPNVITFHQPHQPLNQIRNVLETPGL 550
>gb|BJ449493.1|BJ449493 BJ449493 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak25e05 5', mRNA sequence
Length = 398
Score = 230 bits (496), Expect = 7e-060
Identities = 93/100 (93%), Positives = 97/100 (97%)
Frame = +3 / +1
Query: 6 VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKV 185
VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEH+GPFNLGNPGEF+MLELAKV
Sbjct: 97 VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAKV 276
Query: 186 VQDTIDPEAHIEFRPNTADDPHKRKPDISRAKELLGWEPK 305
VQDTIDP A IEFR NTADDPHKRKPDI++AKELLGWEPK
Sbjct: 277 VQDTIDPNARIEFRANTADDPHKRKPDITKAKELLGWEPK 396
Score = 180 bits (388), Expect = 6e-045
Identities = 80/101 (79%), Positives = 87/101 (86%)
Frame = -3 / -1
Query: 307 TLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMVSWTTLASSSMLNSPGLPRLNGP 128
TLGS P SS A +MSGLRLCGSSAV RNS+ A GSMVS TTLASSS++NSPG PRLNGP
Sbjct: 398 TLGSHPSSSLALVMSGLRLCGSSAVLARNSILALGSMVSCTTLASSSIVNSPGFPRLNGP 219
Query: 127 MCSPSMSFISPSTKSETY*KLLVCLPSP*TVKGSFLSA*AT 5
CSPS+SFISPST+SETY KLLVCLPSP TV+GSFLSA AT
Sbjct: 218 TCSPSISFISPSTRSETYWKLLVCLPSPYTVRGSFLSAWAT 96
Score = 137 bits (293), Expect = 7e-032
Identities = 60/100 (60%), Positives = 73/100 (73%)
Frame = -2 / -3
Query: 305 LGLPAEELFRAADVRLALVRIICGVRTELDVRLWVDGVLDHLSQLQHAEFSRVAEVERPN 126
LGLP E+L DVRLALVR++ GV ELD + VDGVL HL QLQH E RV +VERP+
Sbjct: 396 LGLPPEQLLGLGDVRLALVRVVGGVGPELDPCVGVDGVLHHLGQLQHRELPRVPQVERPH 217
Query: 125 VLPFHELHQPFHQI*DILKAPSLLAITIDCQRLLPQRLSN 6
VLP H+LHQP +QI D+L+AP LLA+ + Q LLPQ L +
Sbjct: 216 VLPLHQLHQPLNQIGDVLEAPRLLAVAVHRQGLLPQCLGD 97
>gb|BF260520.3|BF260520 HVSMEf0022D16f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0022D16f, mRNA sequence
Length = 691
Score = 229 bits (495), Expect = 1e-059
Identities = 94/130 (72%), Positives = 105/130 (80%)
Frame = +3 / +2
Query: 9 AQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKVV 188
A AL KEPLT YGDGK TRS QY+SDLVEG M+LMEG+HI PFN GNPGEF+MLELA VV
Sbjct: 14 AHALTKEPLTAYGDGKHTRSLQYLSDLVEGAMRLMEGDHIVPFNSGNPGEFTMLELANVV 193
Query: 189 QDTIDPEAHIEFRPNTADDPHKRKPDISRAKELLGWEPKVPLREGLPRMVTDFRKRIFGD 368
QDTI P A IEFR NT DDP+KR PDI++AKE LGWEPK+ LR+GLP MVTDFRKRIFGD
Sbjct: 194 QDTIYPNARIEFRENTHDDPYKRMPDITKAKEQLGWEPKIALRDGLPLMVTDFRKRIFGD 373
Query: 369 QEGSTESAGG 398
+ + G
Sbjct: 374 HDSAATVTEG 403
Score = 199 bits (430), Expect = 9e-051
Identities = 92/123 (74%), Positives = 101/123 (82%)
Frame = -3 / -2
Query: 373 SWSPKIRLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMV 194
SWSP IRLRKSVTMRGRPSRR LGS P S A ++SG+RL GSS VF RNS+ A G MV
Sbjct: 378 SWSPNIRLRKSVTMRGRPSRRAILGSHPSCSLALVISGMRLYGSSWVFSRNSIRALG*MV 199
Query: 193 SWTTLASSSMLNSPGLPRLNGPMCSPSMSFISPSTKSETY*KLLVCLPSP*TVKGSFLSA 14
S TTLASSSM+NSPGLP LNG M SPS+S I+PSTKSE Y KLLVCLPSP* VKGSF+SA
Sbjct: 198 SCTTLASSSMVNSPGLPELNGTM*SPSISLIAPSTKSERYCKLLVCLPSP*AVKGSFVSA 19
Query: 13 *AT 5
*A+
Sbjct: 18 *AS 10
Score = 135 bits (290), Expect = 2e-031
Identities = 62/125 (49%), Positives = 83/125 (66%)
Frame = -2 / -1
Query: 383 GGPFLVPEDTFAEVSDHAGKALTEGNLGLPAEELFRAADVRLALVRIICGVRTELDVRLW 204
GG +V E AEV +H G+A+TEG+LGLP + L D+ ALVR++ GV TELD R+
Sbjct: 388 GGAIMVAEYPLAEVGNHEGQAVTEGDLGLPPKLLLGLGDIWHALVRVVMGVLTELDPRVG 209
Query: 203 VDGVLDHLSQLQHAEFSRVAEVERPNVLPFHELHQPFHQI*DILKAPSLLAITIDCQRLL 24
VDGVL ++ Q QH E + VA VE NV+ FH+ H+P +QI +L P +LAI + QRLL
Sbjct: 208 VDGVLHNVGQFQHGELTGVARVEWHNVIAFHQPHRPLNQIRKVL*TPGVLAIAVSRQRLL 29
Query: 23 PQRLS 9
R+S
Sbjct: 28 R*RVS 14
>gb|AL510717.1|AL510717 AL510717 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY05M18u 3',
mRNA sequence
Length = 580
Score = 210 bits (452), Expect(2) = 2e-059
Identities = 83/105 (79%), Positives = 93/105 (88%)
Frame = +3 / -1
Query: 84 DLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKVVQDTIDPEAHIEFRPNTADDPHKRKP 263
DLVEGLM+LMEG+HIGPFNLGNPGEF+MLELAKVVQDTIDP A IEFR NT DDPHKRKP
Sbjct: 511 DLVEGLMRLMEGDHIGPFNLGNPGEFTMLELAKVVQDTIDPNARIEFRENTQDDPHKRKP 332
Query: 264 DISRAKELLGWEPKVPLREGLPRMVTDFRKRIFGDQEGSTESAGG 398
DI++AKE LGWEPK+ LR+GLP MVTDFRKRIFGDQ+ + + G
Sbjct: 331 DITKAKEQLGWEPKIALRDGLPLMVTDFRKRIFGDQDSAATATEG 197
Score = 176 bits (378), Expect(2) = 1e-048
Identities = 76/97 (78%), Positives = 83/97 (85%)
Frame = -3 / +3
Query: 373 SWSPKIRLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMV 194
SWSP IRLRKSVTMRGRPSRR LGS P S A ++SGLRLCGSS VF RNS+ A GSMV
Sbjct: 222 SWSPNIRLRKSVTMRGRPSRRAILGSHPSCSLALVISGLRLCGSSWVFSRNSIRAFGSMV 401
Query: 193 SWTTLASSSMLNSPGLPRLNGPMCSPSMSFISPSTKS 83
SWTTLASSSM+NSPGLP+LNGPM SPS+S I+PSTKS
Sbjct: 402 SWTTLASSSMVNSPGLPKLNGPM*SPSISLINPSTKS 512
Score = 134 bits (287), Expect = 5e-031
Identities = 58/100 (58%), Positives = 72/100 (72%)
Frame = -2 / +2
Query: 383 GGPFLVPEDTFAEVSDHAGKALTEGNLGLPAEELFRAADVRLALVRIICGVRTELDVRLW 204
GG LV E AEV +H G+A+TEG+LGLP E L D+ LALVR++ GV TELD R+
Sbjct: 212 GGAILVAEYPLAEVGNHEGEAVTEGDLGLPPELLLGLGDIWLALVRVVLGVLTELDPRVR 391
Query: 203 VDGVLDHLSQLQHAEFSRVAEVERPNVLPFHELHQPFHQI 84
VDGVLD+L Q QH E + VA+VE PNV+ FH+ HQP +QI
Sbjct: 392 VDGVLDNLGQFQHGELTGVAQVEWPNVITFHQPHQPLNQI 511
Score = 39.1 bits (79), Expect(2) = 2e-059
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3 / -3
Query: 39 VYGDGKQTRSFQYVS 83
VYGDGKQTRSFQYVS
Sbjct: 557 VYGDGKQTRSFQYVS 513
Score = 36.8 bits (74), Expect(2) = 1e-048
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = -3 / +1
Query: 100 SPSTKSETY*KLLVCLPSP*T 38
+P ETY KLLVCLPSP*T
Sbjct: 496 TPQPNQETYWKLLVCLPSP*T 558
>gb|CA002810.1|CA002810 HS08J14r HS Hordeum vulgare subsp. vulgare cDNA clone HS08J14
5-PRIME, mRNA sequence
Length = 466
Score = 224 bits (483), Expect = 4e-058
Identities = 90/101 (89%), Positives = 96/101 (95%)
Frame = +3 / +2
Query: 6 VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKV 185
VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLM+LMEG+HIGPFNLGNPGEF+MLELAKV
Sbjct: 164 VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMRLMEGDHIGPFNLGNPGEFTMLELAKV 343
Query: 186 VQDTIDPEAHIEFRPNTADDPHKRKPDISRAKELLGWEPKV 308
VQDTIDP A IEFR NT DDPHKRKPDI++AKE LGWEPK+
Sbjct: 344 VQDTIDPNARIEFRENTQDDPHKRKPDITKAKEQLGWEPKI 466
Score = 181 bits (389), Expect = 4e-045
Identities = 81/100 (81%), Positives = 88/100 (88%)
Frame = -3 / -2
Query: 304 LGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMVSWTTLASSSMLNSPGLPRLNGPM 125
LGS P S A ++SGLRLCGSS VF RNS+ A GSMVSWTTLASSSM+NSPGLP+LNGPM
Sbjct: 462 LGSHPSCSLALVISGLRLCGSSWVFSRNSIRAFGSMVSWTTLASSSMVNSPGLPKLNGPM 283
Query: 124 CSPSMSFISPSTKSETY*KLLVCLPSP*TVKGSFLSA*AT 5
SPS+S I+PSTKSETY KLLVCLPSP*TVKGSFLSA*AT
Sbjct: 282 *SPSISLINPSTKSETYWKLLVCLPSP*TVKGSFLSA*AT 163
Score = 134 bits (288), Expect = 4e-031
Identities = 59/101 (58%), Positives = 75/101 (74%)
Frame = -2 / -1
Query: 308 NLGLPAEELFRAADVRLALVRIICGVRTELDVRLWVDGVLDHLSQLQHAEFSRVAEVERP 129
+LGLP E L D+ LALVR++ GV TELD R+ VDGVLD+L Q QH E + VA+VE P
Sbjct: 466 DLGLPPELLLGLGDIWLALVRVVLGVLTELDPRVRVDGVLDNLGQFQHGELTGVAQVEWP 287
Query: 128 NVLPFHELHQPFHQI*DILKAPSLLAITIDCQRLLPQRLSN 6
NV+ FH+ HQP +QI ++L+ P LLAI ++ QRLLP RLSN
Sbjct: 286 NVITFHQPHQPLNQIRNVLETPGLLAIAVNRQRLLP*RLSN 164
>gb|BU972745.1|BU972745 HB22J12r BC Hordeum vulgare subsp. vulgare cDNA clone HB22J12
5-PRIME, mRNA sequence
Length = 619
Score = 217 bits (468), Expect = 5e-056
Identities = 88/98 (89%), Positives = 93/98 (94%)
Frame = +3 / +3
Query: 6 VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKV 185
VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLM+LMEG+HIGPFNLGNPGEF+MLELAKV
Sbjct: 324 VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMRLMEGDHIGPFNLGNPGEFTMLELAKV 503
Query: 186 VQDTIDPEAHIEFRPNTADDPHKRKPDISRAKELLGWE 299
VQDTIDP A IEFR NT DDPHKRKPDI++AKE LGWE
Sbjct: 504 VQDTIDPNARIEFRENTQDDPHKRKPDITKAKEQLGWE 617
Score = 179 bits (385), Expect = 1e-044
Identities = 80/99 (80%), Positives = 87/99 (87%)
Frame = -3 / -1
Query: 301 GSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMVSWTTLASSSMLNSPGLPRLNGPMC 122
GS P S A ++SGLRLCGSS VF RNS+ A GSMVSWTTLASSSM+NSPGLP+LNGPM
Sbjct: 619 GSHPSCSLALVISGLRLCGSSWVFSRNSIRAFGSMVSWTTLASSSMVNSPGLPKLNGPM* 440
Query: 121 SPSMSFISPSTKSETY*KLLVCLPSP*TVKGSFLSA*AT 5
SPS+S I+PSTKSETY KLLVCLPSP*TVKGSFLSA*AT
Sbjct: 439 SPSISLINPSTKSETYWKLLVCLPSP*TVKGSFLSA*AT 323
Score = 129 bits (277), Expect = 1e-029
Identities = 57/98 (58%), Positives = 72/98 (73%)
Frame = -2 / -3
Query: 299 LPAEELFRAADVRLALVRIICGVRTELDVRLWVDGVLDHLSQLQHAEFSRVAEVERPNVL 120
LP E L D+ LALVR++ GV TELD R+ VDGVLD+L Q QH E + VA+VE PNV+
Sbjct: 617 LPPELLLGLGDIWLALVRVVLGVLTELDPRVRVDGVLDNLGQFQHGELTGVAQVEWPNVI 438
Query: 119 PFHELHQPFHQI*DILKAPSLLAITIDCQRLLPQRLSN 6
FH+ HQP +QI ++L+ P LLAI ++ QRLLP RLSN
Sbjct: 437 TFHQPHQPLNQIRNVLETPGLLAIAVNRQRLLP*RLSN 324
>gb|BJ544684.1|BJ544684 BJ544684 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak34f15 5', mRNA sequence
Length = 540
Score = 217 bits (468), Expect = 5e-056
Identities = 88/98 (89%), Positives = 93/98 (94%)
Frame = +3 / +1
Query: 6 VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKV 185
VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLM+LMEG+HIGPFNLGNPGEF+MLELAKV
Sbjct: 247 VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMRLMEGDHIGPFNLGNPGEFTMLELAKV 426
Query: 186 VQDTIDPEAHIEFRPNTADDPHKRKPDISRAKELLGWE 299
VQDTIDP A IEFR NT DDPHKRKPDI++AKE LGWE
Sbjct: 427 VQDTIDPNARIEFRENTQDDPHKRKPDITKAKEQLGWE 540
Score = 176 bits (379), Expect = 1e-043
Identities = 79/98 (80%), Positives = 86/98 (87%)
Frame = -3 / -2
Query: 298 SQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMVSWTTLASSSMLNSPGLPRLNGPMCS 119
S P S A ++SGLRLCGSS VF RNS+ A GSMVSWTTLASSSM+NSPGLP+LNGPM S
Sbjct: 539 SHPSCSLALVISGLRLCGSSWVFSRNSIRAFGSMVSWTTLASSSMVNSPGLPKLNGPM*S 360
Query: 118 PSMSFISPSTKSETY*KLLVCLPSP*TVKGSFLSA*AT 5
PS+S I+PSTKSETY KLLVCLPSP*TVKGSFLSA*AT
Sbjct: 359 PSISLINPSTKSETYWKLLVCLPSP*TVKGSFLSA*AT 246
Score = 127 bits (273), Expect = 4e-029
Identities = 56/98 (57%), Positives = 72/98 (73%)
Frame = -2 / -1
Query: 299 LPAEELFRAADVRLALVRIICGVRTELDVRLWVDGVLDHLSQLQHAEFSRVAEVERPNVL 120
LP + L D+ LALVR++ GV TELD R+ VDGVLD+L Q QH E + VA+VE PNV+
Sbjct: 540 LPPKLLLGLGDIWLALVRVVLGVLTELDPRVRVDGVLDNLGQFQHGELTGVAQVEWPNVI 361
Query: 119 PFHELHQPFHQI*DILKAPSLLAITIDCQRLLPQRLSN 6
FH+ HQP +QI ++L+ P LLAI ++ QRLLP RLSN
Sbjct: 360 TFHQPHQPLNQIRNVLETPGLLAIAVNRQRLLP*RLSN 247
>gb|BU996667.1|BU996667 HM14F14r HM Hordeum vulgare subsp. vulgare cDNA clone HM14F14
5-PRIME, mRNA sequence
Length = 604
Score = 215 bits (463), Expect = 3e-055
Identities = 87/97 (89%), Positives = 92/97 (94%)
Frame = +3 / +1
Query: 6 VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKV 185
VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLM+LMEG+HIGPFNLGNPGEF+MLELAKV
Sbjct: 313 VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMRLMEGDHIGPFNLGNPGEFTMLELAKV 492
Query: 186 VQDTIDPEAHIEFRPNTADDPHKRKPDISRAKELLGW 296
VQDTIDP A IEFR NT DDPHKRKPDI++AKE LGW
Sbjct: 493 VQDTIDPNARIEFRENTQDDPHKRKPDITKAKEQLGW 603
Score = 174 bits (375), Expect = 4e-043
Identities = 78/96 (81%), Positives = 85/96 (88%)
Frame = -3 / -3
Query: 292 PRSSFARLMSGLRLCGSSAVFGRNSMCASGSMVSWTTLASSSMLNSPGLPRLNGPMCSPS 113
P S A ++SGLRLCGSS VF RNS+ A GSMVSWTTLASSSM+NSPGLP+LNGPM SPS
Sbjct: 599 PSCSLALVISGLRLCGSSWVFSRNSIRAFGSMVSWTTLASSSMVNSPGLPKLNGPM*SPS 420
Query: 112 MSFISPSTKSETY*KLLVCLPSP*TVKGSFLSA*AT 5
+S I+PSTKSETY KLLVCLPSP*TVKGSFLSA*AT
Sbjct: 419 ISLINPSTKSETYWKLLVCLPSP*TVKGSFLSA*AT 312
Score = 127 bits (273), Expect = 4e-029
Identities = 56/97 (57%), Positives = 71/97 (73%)
Frame = -2 / -2
Query: 296 PAEELFRAADVRLALVRIICGVRTELDVRLWVDGVLDHLSQLQHAEFSRVAEVERPNVLP 117
P E L D+ LALVR++ GV TELD R+ VDGVLD+L Q QH E + VA+VE PNV+
Sbjct: 603 PPELLLGLGDIWLALVRVVLGVLTELDPRVRVDGVLDNLGQFQHGELTGVAQVEWPNVIT 424
Query: 116 FHELHQPFHQI*DILKAPSLLAITIDCQRLLPQRLSN 6
FH+ HQP +QI ++L+ P LLAI ++ QRLLP RLSN
Sbjct: 423 FHQPHQPLNQIRNVLETPGLLAIAVNRQRLLP*RLSN 313
>gb|BM816655.1|BM816655 HB01A07_T3.ab1 HB Hordeum vulgare subsp. vulgare cDNA clone
HB01A07_T3.ab1 similar to dTDP-glucose 4,6-dehydratase,,
mRNA sequence
Length = 859
Score = 201 bits (433), Expect(2) = 4e-055
Identities = 83/95 (87%), Positives = 88/95 (92%)
Frame = +3 / +3
Query: 6 VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKV 185
VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLM+LMEG+HI PFNLGNPGEF+MLELAKV
Sbjct: 372 VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMRLMEGDHIXPFNLGNPGEFTMLELAKV 551
Query: 186 VQDTIDPEAHIEFRPNTADDPHKRKPDISRAKELL 290
VQDTIDP A IEFR NT DDPHKRKPDI++AK L
Sbjct: 552 VQDTIDPNARIEFRENTQDDPHKRKPDITKAKGAL 656
Score = 166 bits (357), Expect(2) = 4e-046
Identities = 75/91 (82%), Positives = 82/91 (90%)
Frame = -3 / -1
Query: 277 ARLMSGLRLCGSSAVFGRNSMCASGSMVSWTTLASSSMLNSPGLPRLNGPMCSPSMSFIS 98
A ++SGLRLCGSS VF RNS+ A GSMVSWTTLASSSM+NSPGLP+LNG M SPS+S I+
Sbjct: 643 ALVISGLRLCGSSWVFSRNSIRAFGSMVSWTTLASSSMVNSPGLPKLNGXM*SPSISLIN 464
Query: 97 PSTKSETY*KLLVCLPSP*TVKGSFLSA*AT 5
PSTKSETY KLLVCLPSP*TVKGSFLSA*AT
Sbjct: 463 PSTKSETYWKLLVCLPSP*TVKGSFLSA*AT 371
Score = 121 bits (258), Expect(2) = 9e-029
Identities = 53/92 (57%), Positives = 68/92 (73%)
Frame = -2 / -3
Query: 281 FRAADVRLALVRIICGVRTELDVRLWVDGVLDHLSQLQHAEFSRVAEVERPNVLPFHELH 102
F D+ LALVR++ GV TELD R+ VDGVLD+L Q QH E + VA+VE NV+ FH+ H
Sbjct: 647 FGLGDIWLALVRVVLGVLTELDPRVRVDGVLDNLGQFQHGELTGVAQVEWXNVITFHQPH 468
Query: 101 QPFHQI*DILKAPSLLAITIDCQRLLPQRLSN 6
QP +QI ++L+ P LLAI ++ QRLLP RLSN
Sbjct: 467 QPLNQIRNVLETPGLLAIAVNRQRLLP*RLSN 372
Score = 38.2 bits (77), Expect(2) = 4e-046
Identities = 16/21 (76%), Positives = 16/21 (76%)
Frame = -3 / -2
Query: 352 LRKSVTMRGRPSRRGTLGSQP 290
LRKSV MRGRPSR G LG P
Sbjct: 720 LRKSVPMRGRPSREGDLGLPP 658
Score = 33.6 bits (67), Expect(2) = 4e-055
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +3 / +2
Query: 291 GWEPKVPLREGLPRMVTDFRK 353
G P+ P R+GLP M TDFRK
Sbjct: 659 GGSPRSPSRDGLPLMGTDFRK 721
Score = 25.4 bits (49), Expect(2) = 9e-029
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = -2 / -1
Query: 365 PEDTFAEVSDHAGKALTEGNLGLP 294
P AEV H GKA+T G P
Sbjct: 733 PNIRLAEVGTHEGKAVTGGRSWAP 662
>gb|AV936421.1|AV936421 AV936421 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal11e02 3', mRNA sequence
Length = 647
Score = 197 bits (425), Expect(2) = 2e-053
Identities = 78/101 (77%), Positives = 91/101 (90%)
Frame = +3 / -2
Query: 66 SFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKVVQDTIDPEAHIEFRPNTADD 245
SFQYVSDLV GLM LME +HIGPFNLGNPGEF+MLELA+VV++TIDP + IEF+PNTADD
Sbjct: 601 SFQYVSDLVAGLMALMESDHIGPFNLGNPGEFTMLELAEVVKETIDPMSTIEFKPNTADD 422
Query: 246 PHKRKPDISRAKELLGWEPKVPLREGLPRMVTDFRKRIFGD 368
PH RKPDI++AK++LGWEPKV L+EGLP MVTDFRKRI +
Sbjct: 421 PHMRKPDITKAKQMLGWEPKVSLKEGLPLMVTDFRKRILDE 299
Score = 135 bits (289), Expect = 3e-031
Identities = 62/102 (60%), Positives = 78/102 (76%)
Frame = -3 / +3
Query: 370 WSPKIRLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMVS 191
+S KI LRKSVT++GRPS R T GSQP FA ++SG + GSSAV G NS+ GS+VS
Sbjct: 297 YSSKILLRKSVTIKGRPSLRDTFGSQPSICFALVISGFLIWGSSAVLGLNSIVDIGSIVS 476
Query: 190 WTTLASSSMLNSPGLPRLNGPMCSPSMSFISPSTKSETY*KL 65
+TT ASS+M+NSPG PRL GP+ S S+ I+P+T+SETY*KL
Sbjct: 477 FTTSASSNMVNSPGFPRLKGPI*SLSIRAINPATRSETY*KL 602
Score = 31.3 bits (62), Expect(2) = 2e-053
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = +3 / -1
Query: 33 LTVYGDGKQTRSF 71
+TVYGDGKQTR F
Sbjct: 635 MTVYGDGKQTRKF 597
>gb|BE455469.2|BE455469 HVSMEg0017F01f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0017F01f, mRNA sequence
Length = 588
Score = 204 bits (439), Expect = 5e-052
Identities = 82/95 (86%), Positives = 87/95 (91%)
Frame = +3 / +2
Query: 90 VEGLMKLMEGEHIGPFNLGNPGEFSMLELAKVVQDTIDPEAHIEFRPNTADDPHKRKPDI 269
VEGLMKLMEGEH+GPFNLGNPGEF+MLELAKVVQDTIDP A IEFR NTADDPHKRKPDI
Sbjct: 257 VEGLMKLMEGEHVGPFNLGNPGEFTMLELAKVVQDTIDPNARIEFRANTADDPHKRKPDI 436
Query: 270 SRAKELLGWEPKVPLREGLPRMVTDFRKRIFGDQE 374
++AKELLGWEPKV LR GLP MV DFR RIFGDQ+
Sbjct: 437 TKAKELLGWEPKVALRNGLPLMVQDFRTRIFGDQK 541
Score = 165 bits (355), Expect = 2e-040
Identities = 71/94 (75%), Positives = 78/94 (82%)
Frame = -3 / -1
Query: 370 WSPKIRLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMVS 191
WSPK+R+RKS TM GRP R TLGS P SS A +MSGLRLCGSSAV RNS+ A GSMVS
Sbjct: 537 WSPKMRVRKSWTMSGRPFRSATLGSHPSSSLALVMSGLRLCGSSAVLARNSILALGSMVS 358
Query: 190 WTTLASSSMLNSPGLPRLNGPMCSPSMSFISPST 89
TTLASSS++NSPG PRLNGP CSPS+SFISPST
Sbjct: 357 CTTLASSSIVNSPGFPRLNGPTCSPSISFISPST 256
Score = 127 bits (271), Expect = 8e-029
Identities = 56/94 (59%), Positives = 67/94 (71%)
Frame = -2 / -3
Query: 371 LVPEDTFAEVSDHAGKALTEGNLGLPAEELFRAADVRLALVRIICGVRTELDVRLWVDGV 192
LV ED AEV DH +A+ E +LGLP E+L DVRLALVR++ GV ELD + VDGV
Sbjct: 538 LVAEDAGAEVLDHEREAVPERHLGLPPEQLLGLGDVRLALVRVVGGVGPELDPCVGVDGV 359
Query: 191 LDHLSQLQHAEFSRVAEVERPNVLPFHELHQPFH 90
L HL QLQH E RV +VERP+VLP H+LHQP +
Sbjct: 358 LHHLGQLQHRELPRVPQVERPHVLPLHQLHQPLN 257
>gb|AV920933.1|AV920933 AV920933 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags16c09 3', mRNA sequence
Length = 606
Score = 199 bits (430), Expect = 9e-051
Identities = 79/102 (77%), Positives = 92/102 (90%)
Frame = +3 / -2
Query: 63 RSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKVVQDTIDPEAHIEFRPNTAD 242
RSFQYVSDLV GLM LME +HIGPFNLGNPGEF+MLELA+VV++TIDP + IEF+PNTAD
Sbjct: 605 RSFQYVSDLVAGLMALMESDHIGPFNLGNPGEFTMLELAEVVKETIDPMSTIEFKPNTAD 426
Query: 243 DPHKRKPDISRAKELLGWEPKVPLREGLPRMVTDFRKRIFGD 368
DPH RKPDI++AK++LGWEPKV L+EGLP MVTDFRKRI +
Sbjct: 425 DPHMRKPDITKAKQMLGWEPKVSLKEGLPLMVTDFRKRILDE 300
Score = 135 bits (289), Expect = 3e-031
Identities = 62/102 (60%), Positives = 78/102 (76%)
Frame = -3 / +1
Query: 370 WSPKIRLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMVS 191
+S KI LRKSVT++GRPS R T GSQP FA ++SG + GSSAV G NS+ GS+VS
Sbjct: 298 YSSKILLRKSVTIKGRPSLRDTFGSQPSICFALVISGFLIWGSSAVLGLNSIVDIGSIVS 477
Query: 190 WTTLASSSMLNSPGLPRLNGPMCSPSMSFISPSTKSETY*KL 65
+TT ASS+M+NSPG PRL GP+ S S+ I+P+T+SETY*KL
Sbjct: 478 FTTSASSNMVNSPGFPRLKGPI*SLSIRAINPATRSETY*KL 603
>gb|BM443008.2|BM443008 EBro02_SQ002_C21_R root, 3 week, hydroponic grown, low nitrogen, cv
Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone
EBro02_SQ002_C21 5', mRNA sequence
Length = 465
Score = 198 bits (427), Expect = 2e-050
Identities = 81/88 (92%), Positives = 84/88 (95%)
Frame = +3 / +2
Query: 6 VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKV 185
VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLM+LMEG+HIGPFNLGNPGEF+MLELAKV
Sbjct: 200 VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMRLMEGDHIGPFNLGNPGEFTMLELAKV 379
Query: 186 VQDTIDPEAHIEFRPNTADDPHKRKPDI 269
VQDTIDP A IEFR NT DDPHKRKPDI
Sbjct: 380 VQDTIDPNARIEFRENTQDDPHKRKPDI 463
Score = 169 bits (364), Expect = 1e-041
Identities = 75/89 (84%), Positives = 82/89 (92%)
Frame = -3 / -1
Query: 271 LMSGLRLCGSSAVFGRNSMCASGSMVSWTTLASSSMLNSPGLPRLNGPMCSPSMSFISPS 92
++SGLRLCGSS VF RNS+ A GSMVSWTTLASSSM+NSPGLP+LNGPM SPS+S I+PS
Sbjct: 465 VISGLRLCGSSWVFSRNSIRAFGSMVSWTTLASSSMVNSPGLPKLNGPM*SPSISLINPS 286
Query: 91 TKSETY*KLLVCLPSP*TVKGSFLSA*AT 5
TKSETY KLLVCLPSP*TVKGSFLSA*AT
Sbjct: 285 TKSETYWKLLVCLPSP*TVKGSFLSA*AT 199
Score = 123 bits (264), Expect = 7e-028
Identities = 53/88 (60%), Positives = 68/88 (77%)
Frame = -2 / -3
Query: 269 DVRLALVRIICGVRTELDVRLWVDGVLDHLSQLQHAEFSRVAEVERPNVLPFHELHQPFH 90
D+ LALVR++ GV TELD R+ VDGVLD+L Q QH E + VA+VE PNV+ FH+ HQP +
Sbjct: 463 DIWLALVRVVLGVLTELDPRVRVDGVLDNLGQFQHGELTGVAQVEWPNVITFHQPHQPLN 284
Query: 89 QI*DILKAPSLLAITIDCQRLLPQRLSN 6
QI ++L+ P LLAI ++ QRLLP RLSN
Sbjct: 283 QIRNVLETPGLLAIAVNRQRLLP*RLSN 200
>gb|BG418221.1|BG418221 HVSMEk0021P03f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0021P03f, mRNA sequence
Length = 491
Score = 197 bits (424), Expect = 6e-050
Identities = 79/92 (85%), Positives = 84/92 (91%)
Frame = +3 / -2
Query: 99 LMKLMEGEHIGPFNLGNPGEFSMLELAKVVQDTIDPEAHIEFRPNTADDPHKRKPDISRA 278
LMKLMEGEH+GPFNLGNPGEF+MLELAKVVQDTIDP A IEFR NTADDPHKRKPDI++A
Sbjct: 490 LMKLMEGEHVGPFNLGNPGEFTMLELAKVVQDTIDPNARIEFRANTADDPHKRKPDITKA 311
Query: 279 KELLGWEPKVPLREGLPRMVTDFRKRIFGDQE 374
KELLGWEPKV LR GLP MV DFR RIFGDQ+
Sbjct: 310 KELLGWEPKVALRNGLPLMVQDFRTRIFGDQK 215
Score = 158 bits (339), Expect = 3e-038
Identities = 68/91 (74%), Positives = 75/91 (82%)
Frame = -3 / +3
Query: 370 WSPKIRLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMVS 191
WSPK+R+RKS TM GRP R TLGS P SS A +MSGLRLCGSSAV RNS+ A GSMVS
Sbjct: 219 WSPKMRVRKSWTMSGRPFRSATLGSHPSSSLALVMSGLRLCGSSAVLARNSILALGSMVS 398
Query: 190 WTTLASSSMLNSPGLPRLNGPMCSPSMSFIS 98
TTLASSS++NSPG PRLNGP CSPS+SFIS
Sbjct: 399 CTTLASSSIVNSPGFPRLNGPTCSPSISFIS 491
Score = 121 bits (258), Expect = 5e-027
Identities = 54/91 (59%), Positives = 65/91 (71%)
Frame = -2 / +2
Query: 371 LVPEDTFAEVSDHAGKALTEGNLGLPAEELFRAADVRLALVRIICGVRTELDVRLWVDGV 192
LV E+ AEV DH +A+ E +LGLP E+L DVRLALVR++ GV ELD + VDGV
Sbjct: 218 LVAENAGAEVLDHEREAVPERHLGLPPEQLLGLGDVRLALVRVVGGVGPELDPCVGVDGV 397
Query: 191 LDHLSQLQHAEFSRVAEVERPNVLPFHELHQ 99
L HL QLQH E RV +VERP+VLP H+LHQ
Sbjct: 398 LHHLGQLQHRELPRVPQVERPHVLPLHQLHQ 490
>gb|AJ463159.1|AJ463159 AJ463159 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200085A08F1, mRNA sequence
Length = 420
Score = 196 bits (423), Expect = 8e-050
Identities = 77/99 (77%), Positives = 87/99 (87%)
Frame = +3 / +1
Query: 102 MKLMEGEHIGPFNLGNPGEFSMLELAKVVQDTIDPEAHIEFRPNTADDPHKRKPDISRAK 281
M+LMEG+HIGPFNLGNPGEF+MLELAKVVQDTIDP A IEFR NT DDPHKRKPDI++AK
Sbjct: 1 MRLMEGDHIGPFNLGNPGEFTMLELAKVVQDTIDPNARIEFRENTQDDPHKRKPDITKAK 180
Query: 282 ELLGWEPKVPLREGLPRMVTDFRKRIFGDQEGSTESAGG 398
E LGWEPK+ LR+GLP MVTDFRKRIFGDQ+ + + G
Sbjct: 181 EQLGWEPKIALRDGLPLMVTDFRKRIFGDQDSAATATEG 297
Score = 165 bits (354), Expect = 3e-040
Identities = 71/89 (79%), Positives = 77/89 (86%)
Frame = -3 / -2
Query: 373 SWSPKIRLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMV 194
SWSP IRLRKSVTMRGRPSRR LGS P SFA ++SGLRLCGSS VF RNS+ A GSMV
Sbjct: 272 SWSPNIRLRKSVTMRGRPSRRAILGSHPSCSFALVISGLRLCGSSWVFSRNSIRAFGSMV 93
Query: 193 SWTTLASSSMLNSPGLPRLNGPMCSPSMS 107
SWTTLASSSM+NSPGLP+LNGPM SPS+S
Sbjct: 92 SWTTLASSSMVNSPGLPKLNGPM*SPSIS 6
Score = 123 bits (264), Expect = 7e-028
Identities = 54/94 (57%), Positives = 67/94 (71%)
Frame = -2 / -1
Query: 383 GGPFLVPEDTFAEVSDHAGKALTEGNLGLPAEELFRAADVRLALVRIICGVRTELDVRLW 204
GG LV E AEV +H G+A+TEG+LGLP E L D+ LALVR++ GV TELD R+
Sbjct: 282 GGAILVAEYPLAEVGNHEGEAVTEGDLGLPPELLLCLGDIWLALVRVVLGVLTELDPRVR 103
Query: 203 VDGVLDHLSQLQHAEFSRVAEVERPNVLPFHELH 102
VDGVLD+L Q QH E + VA+VE PNV+ FH+ H
Sbjct: 102 VDGVLDNLGQFQHGELTGVAQVEWPNVITFHQPH 1
>gb|BI960078.1|BI960078 HVSMEn0023C04f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0023C04f, mRNA sequence
Length = 617
Score = 194 bits (418), Expect = 4e-049
Identities = 78/95 (82%), Positives = 84/95 (88%)
Frame = +3 / +3
Query: 90 VEGLMKLMEGEHIGPFNLGNPGEFSMLELAKVVQDTIDPEAHIEFRPNTADDPHKRKPDI 269
+ G KLMEGEH+GPFNLGNPGEF+MLELAKVVQDTIDP A IEFR NTADDPHKRKPDI
Sbjct: 150 LRG*XKLMEGEHVGPFNLGNPGEFTMLELAKVVQDTIDPNARIEFRANTADDPHKRKPDI 329
Query: 270 SRAKELLGWEPKVPLREGLPRMVTDFRKRIFGDQE 374
++AKELLGWEPKV LR GLP MV DFR RIFGDQ+
Sbjct: 330 TKAKELLGWEPKVALRNGLPLMVXDFRTRIFGDQK 434
Score = 153 bits (328), Expect(2) = 5e-038
Identities = 66/92 (71%), Positives = 73/92 (79%)
Frame = -3 / -2
Query: 370 WSPKIRLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMVS 191
WSPK+R+RKS TM GRP R TLGS P SS A +MSGLRLCGSSAV RNS+ A GSMVS
Sbjct: 430 WSPKMRVRKSWTMSGRPFRSATLGSHPSSSLALVMSGLRLCGSSAVLARNSILALGSMVS 251
Query: 190 WTTLASSSMLNSPGLPRLNGPMCSPSMSFISP 95
TTLASSS++NSPG PRLNGP CSPS+S P
Sbjct: 250 CTTLASSSIVNSPGFPRLNGPTCSPSISXHQP 155
Score = 118 bits (252), Expect(2) = 4e-034
Identities = 53/89 (59%), Positives = 63/89 (70%)
Frame = -2 / -1
Query: 371 LVPEDTFAEVSDHAGKALTEGNLGLPAEELFRAADVRLALVRIICGVRTELDVRLWVDGV 192
LV ED AEV DH +A+ E +LGLP E+L DVRLALVR++ GV ELD + VDGV
Sbjct: 431 LVAEDAGAEVXDHEREAVPERHLGLPPEQLLGLGDVRLALVRVVGGVGPELDPCVGVDGV 252
Query: 191 LDHLSQLQHAEFSRVAEVERPNVLPFHEL 105
L HL QLQH E RV +VERP+VLP H+L
Sbjct: 251 LHHLGQLQHRELPRVPQVERPHVLPLHQL 165
Score = 84.0 bits (177), Expect(2) = 4e-025
Identities = 38/50 (76%), Positives = 38/50 (76%)
Frame = +3 / +2
Query: 6 VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPG 155
VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLM G G G PG
Sbjct: 65 VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMXADGGGARGAVQPGEPG 214
Score = 73.0 bits (153), Expect(2) = 5e-023
Identities = 33/50 (66%), Positives = 36/50 (72%)
Frame = -3 / -3
Query: 154 PGLPRLNGPMCSPSMSFISPSTKSETY*KLLVCLPSP*TVKGSFLSA*AT 5
PG P P P + ISPST+SETY KLLVCLPSP TV+GSFLSA AT
Sbjct: 213 PGSPG*TAPRAPPPSAXISPSTRSETYWKLLVCLPSPYTVRGSFLSAWAT 64
Score = 54.2 bits (112), Expect(2) = 5e-023
Identities = 27/58 (46%), Positives = 28/58 (48%)
Frame = -1 / -3
Query: 369 GPRRYVCGSQXXXXXXXXXXXPWAPSRGALSRG*CQACACADHLRCSDGTRCAPLGRW 196
G RR CGS PWAP+R A *C ACACA RC GTR GRW
Sbjct: 429 GRRRCGCGSXGP*AGGRSGAPPWAPTRAAPWPW*CPACACAGRRRCWPGTRSLRWGRW 256
Score = 50.1 bits (103), Expect(2) = 4e-025
Identities = 25/46 (54%), Positives = 28/46 (60%)
Frame = +1 / +1
Query: 235 PQMIRTSASLTSAARKSSSAGSPRFPSVRAFPAWSLTSANVSSGTR 372
P RTSAS TS +S S GSPR+ S A +WS TSA SS TR
Sbjct: 295 PPTTRTSASRTSPRPRSCSGGSPRWRSGTASRSWSXTSAPASSATR 432
Score = 46.0 bits (94), Expect(2) = 4e-034
Identities = 20/42 (47%), Positives = 26/42 (61%)
Frame = -2 / -2
Query: 131 PNVLPFHELHQPFHQI*DILKAPSLLAITIDCQRLLPQRLSN 6
P P HQP +QI D+L+AP LLA+ + Q LLPQ L +
Sbjct: 190 PTCSPSISXHQPLNQIGDVLEAPRLLAVAVHRQGLLPQCLGD 65
Score = 24.4 bits (47), Expect(2) = 5e-038
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -1 / -1
Query: 81 RHIESS*SACHHHRLSKAPSSAP 13
R SS SAC S APSS P
Sbjct: 140 RRTGSSSSACRRRTPSGAPSSVP 72
>gb|AJ463158.1|AJ463158 AJ463158 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200037F02F1, mRNA sequence
Length = 360
Score = 189 bits (407), Expect = 1e-047
Identities = 74/95 (77%), Positives = 83/95 (87%)
Frame = +3 / +3
Query: 114 EGEHIGPFNLGNPGEFSMLELAKVVQDTIDPEAHIEFRPNTADDPHKRKPDISRAKELLG 293
EG+HIGPFNLGNPGEF+MLELAKVVQDTIDP A IEFR NT DDPHKRKPDI++AKE LG
Sbjct: 3 EGDHIGPFNLGNPGEFTMLELAKVVQDTIDPNARIEFRENTQDDPHKRKPDITKAKEQLG 182
Query: 294 WEPKVPLREGLPRMVTDFRKRIFGDQEGSTESAGG 398
WEPK+ LR+GLP MVTDFRKRIFGDQ+ + + G
Sbjct: 183 WEPKIALRDGLPLMVTDFRKRIFGDQDSAATATEG 287
Score = 162 bits (349), Expect = 1e-039
Identities = 70/87 (80%), Positives = 75/87 (86%)
Frame = -3 / -3
Query: 373 SWSPKIRLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMV 194
SWSP IRLRKSVTMRGRPSRR LGS P SFA ++SGLRLCGSS VF RNS+ A GSMV
Sbjct: 262 SWSPNIRLRKSVTMRGRPSRRAILGSHPSCSFALVISGLRLCGSSWVFSRNSIRAFGSMV 83
Query: 193 SWTTLASSSMLNSPGLPRLNGPMCSPS 113
SWTTLASSSM+NSPGLP+LNGPM SPS
Sbjct: 82 SWTTLASSSMVNSPGLPKLNGPM*SPS 2
Score = 116 bits (249), Expect = 8e-026
Identities = 52/90 (57%), Positives = 64/90 (71%)
Frame = -2 / -2
Query: 383 GGPFLVPEDTFAEVSDHAGKALTEGNLGLPAEELFRAADVRLALVRIICGVRTELDVRLW 204
GG LV E AEV +H G+A+TEG+LGLP E L D+ LALVR++ GV TELD R+
Sbjct: 272 GGAILVAEYPLAEVGNHEGEAVTEGDLGLPPELLLCLGDIWLALVRVVLGVLTELDPRVR 93
Query: 203 VDGVLDHLSQLQHAEFSRVAEVERPNVLPF 114
VDGVLD+L Q QH E + VA+VE PNV+ F
Sbjct: 92 VDGVLDNLGQFQHGELTGVAQVEWPNVITF 3
>gb|BJ456934.1|BJ456934 BJ456934 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak25e05 3', mRNA sequence
Length = 434
Score = 179 bits (385), Expect = 1e-044
Identities = 71/84 (84%), Positives = 76/84 (90%)
Frame = +3 / -3
Query: 123 HIGPFNLGNPGEFSMLELAKVVQDTIDPEAHIEFRPNTADDPHKRKPDISRAKELLGWEP 302
H+GPFNLGNPGEF+MLELAKVVQDTIDP A IEFR NTADDPHKRKPDI++AKELLGWEP
Sbjct: 432 HVGPFNLGNPGEFTMLELAKVVQDTIDPNARIEFRANTADDPHKRKPDITKAKELLGWEP 253
Query: 303 KVPLREGLPRMVTDFRKRIFGDQE 374
KV LR GLP MV DFR RIFGDQ+
Sbjct: 252 KVALRNGLPLMVQDFRTRIFGDQK 181
Score = 142 bits (305), Expect = 2e-033
Identities = 61/83 (73%), Positives = 67/83 (80%)
Frame = -3 / +2
Query: 370 WSPKIRLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMVS 191
WSPK+R+RKS TM GRP R TLGS P SS A +MSGLRLCGSSAV RNS+ A GSMVS
Sbjct: 185 WSPKMRVRKSWTMSGRPFRSATLGSHPSSSLALVMSGLRLCGSSAVLARNSILALGSMVS 364
Query: 190 WTTLASSSMLNSPGLPRLNGPMC 122
TTLASSS++NSPG PRLNGP C
Sbjct: 365 CTTLASSSIVNSPGFPRLNGPTC 433
Score = 105 bits (225), Expect = 2e-022
Identities = 49/83 (59%), Positives = 58/83 (69%)
Frame = -2 / +1
Query: 371 LVPEDTFAEVSDHAGKALTEGNLGLPAEELFRAADVRLALVRIICGVRTELDVRLWVDGV 192
LV ED AEV DH +A+ E +LGLP E+L DVRLALVR++ GV ELD + VDGV
Sbjct: 184 LVAEDAGAEVLDHEREAVPERHLGLPPEQLLGLGDVRLALVRVVGGVGPELDPCVGVDGV 363
Query: 191 LDHLSQLQHAEFSRVAEVERPNV 123
L HL QLQH E RV +VERP+V
Sbjct: 364 LHHLGQLQHRELPRVPQVERPHV 432
>gb|BM370165.2|BM370165 EBro08_SQ003_D02_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ003_D02 5', mRNA sequence
Length = 242
Score = 175 bits (376), Expect = 3e-043
Identities = 70/80 (87%), Positives = 74/80 (92%)
Frame = +3 / +3
Query: 99 LMKLMEGEHIGPFNLGNPGEFSMLELAKVVQDTIDPEAHIEFRPNTADDPHKRKPDISRA 278
LMKLMEGEH+GPFNLGNPGEF+MLELAKVVQDTIDP A IEFR NTADDPHKRKPDI++A
Sbjct: 3 LMKLMEGEHVGPFNLGNPGEFTMLELAKVVQDTIDPNARIEFRANTADDPHKRKPDITKA 182
Query: 279 KELLGWEPKVPLREGLPRMV 338
KELLGWEPKV LR GLP MV
Sbjct: 183 KELLGWEPKVALRNGLPLMV 242
Score = 137 bits (294), Expect = 5e-032
Identities = 60/80 (75%), Positives = 65/80 (81%)
Frame = -3 / -2
Query: 337 TMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMVSWTTLASSSMLN 158
TM GRP R TLGS P SS A +MSGLRLCGSSAV RNS+ A GSMVS TTLASSS++N
Sbjct: 241 TMSGRPFRSATLGSHPSSSLALVMSGLRLCGSSAVLARNSILALGSMVSCTTLASSSIVN 62
Query: 157 SPGLPRLNGPMCSPSMSFIS 98
SPG PRLNGP CSPS+SFIS
Sbjct: 61 SPGFPRLNGPTCSPSISFIS 2
Score = 109 bits (233), Expect = 1e-023
Identities = 47/80 (58%), Positives = 57/80 (71%)
Frame = -2 / -1
Query: 338 DHAGKALTEGNLGLPAEELFRAADVRLALVRIICGVRTELDVRLWVDGVLDHLSQLQHAE 159
DH + + E +LGLP E+L DVRLALVR++ GV ELD + VDGVL HL QLQH E
Sbjct: 242 DHERETVPERHLGLPPEQLLGLGDVRLALVRVVGGVGPELDPCVGVDGVLHHLGQLQHRE 63
Query: 158 FSRVAEVERPNVLPFHELHQ 99
RV +VERP+VLP H+LHQ
Sbjct: 62 LPRVPQVERPHVLPLHQLHQ 3
>gb|BF256552.2|BF256552 HVSMEf0010F04f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0010F04f, mRNA sequence
Length = 840
Score = 173 bits (373), Expect = 7e-043
Identities = 71/118 (60%), Positives = 91/118 (77%)
Frame = +3 / +3
Query: 6 VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKV 185
+AQA+R E LTV G QTRSF YV+D+V GLMKLM G++ GP N+GNPGEF+MLELA+
Sbjct: 207 IAQAIRGEALTVQKPGTQTRSFCYVADMVNGLMKLMNGDNTGPINIGNPGEFTMLELAEN 386
Query: 186 VQDTIDPEAHIEFRPNTADDPHKRKPDISRAKELLGWEPKVPLREGLPRMVTDFRKRI 359
V++ I+PE + NT DDP +RKPDI++AKE+L WEPKV LR+GL M DFR+R+
Sbjct: 387 VKELINPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPKVVLRDGLVLMEDDFRERL 560
Score = 118 bits (253), Expect = 2e-026
Identities = 64/116 (55%), Positives = 75/116 (64%)
Frame = -3 / -3
Query: 355 RLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMVSWTTLA 176
R RKS +M +PSRR TLGSQ R+SFA +MSG GSS VF SG + S+T A
Sbjct: 556 RSRKSSSMSTKPSRRTTLGSQSRTSFAFVMSGFLWRGSSGVFSVIVTVTSGLINSFTFSA 377
Query: 175 SSSMLNSPGLPRLNGPMCSPSMSFISPSTKSETY*KLLVCLPSP*TVKGSFLSA*A 8
SSSM+NSPG P L GP+ SP +SFI P T S T KLLVC+P TV+ S A*A
Sbjct: 376 SSSMVNSPGFPMLMGPVLSPFISFIRPLTISAT*QKLLVCVPGFWTVRASPRMA*A 209
>gb|AV917603.1|AV917603 AV917603 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags10j24 3', mRNA sequence
Length = 682
Score = 173 bits (373), Expect = 7e-043
Identities = 71/118 (60%), Positives = 91/118 (77%)
Frame = +3 / -1
Query: 6 VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKV 185
+AQA+R E LTV G QTRSF YV+D+V GLMKLM G++ GP N+GNPGEF+MLELA+
Sbjct: 646 IAQAIRGEALTVQKPGTQTRSFCYVADMVNGLMKLMNGDNTGPINIGNPGEFTMLELAEN 467
Query: 186 VQDTIDPEAHIEFRPNTADDPHKRKPDISRAKELLGWEPKVPLREGLPRMVTDFRKRI 359
V++ I+PE + NT DDP +RKPDI++AKE+L WEPKV LR+GL M DFR+R+
Sbjct: 466 VKELINPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPKVVLRDGLVLMEDDFRERL 293
Score = 118 bits (253), Expect = 2e-026
Identities = 64/116 (55%), Positives = 75/116 (64%)
Frame = -3 / +3
Query: 355 RLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMVSWTTLA 176
R RKS +M +PSRR TLGSQ R+SFA +MSG GSS VF SG + S+T A
Sbjct: 297 RSRKSSSMSTKPSRRTTLGSQSRTSFAFVMSGFLWRGSSGVFSVIVTVTSGLINSFTFSA 476
Query: 175 SSSMLNSPGLPRLNGPMCSPSMSFISPSTKSETY*KLLVCLPSP*TVKGSFLSA*A 8
SSSM+NSPG P L GP+ SP +SFI P T S T KLLVC+P TV+ S A*A
Sbjct: 477 SSSMVNSPGFPMLMGPVLSPFISFIRPLTISAT*QKLLVCVPGFWTVRASPRMA*A 644
>gb|AV918649.1|AV918649 AV918649 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags21m04 3', mRNA sequence
Length = 620
Score = 173 bits (373), Expect = 7e-043
Identities = 71/118 (60%), Positives = 91/118 (77%)
Frame = +3 / -3
Query: 6 VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKV 185
+AQA+R E LTV G QTRSF YV+D+V GLMKLM G++ GP N+GNPGEF+MLELA+
Sbjct: 600 IAQAIRGEALTVQKPGTQTRSFCYVADMVNGLMKLMNGDNTGPINIGNPGEFTMLELAEN 421
Query: 186 VQDTIDPEAHIEFRPNTADDPHKRKPDISRAKELLGWEPKVPLREGLPRMVTDFRKRI 359
V++ I+PE + NT DDP +RKPDI++AKE+L WEPKV LR+GL M DFR+R+
Sbjct: 420 VKELINPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPKVVLRDGLVLMEDDFRERL 247
Score = 118 bits (253), Expect = 2e-026
Identities = 64/116 (55%), Positives = 75/116 (64%)
Frame = -3 / +2
Query: 355 RLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMVSWTTLA 176
R RKS +M +PSRR TLGSQ R+SFA +MSG GSS VF SG + S+T A
Sbjct: 251 RSRKSSSMSTKPSRRTTLGSQSRTSFAFVMSGFLWRGSSGVFSVIVTVTSGLINSFTFSA 430
Query: 175 SSSMLNSPGLPRLNGPMCSPSMSFISPSTKSETY*KLLVCLPSP*TVKGSFLSA*A 8
SSSM+NSPG P L GP+ SP +SFI P T S T KLLVC+P TV+ S A*A
Sbjct: 431 SSSMVNSPGFPMLMGPVLSPFISFIRPLTISAT*QKLLVCVPGFWTVRASPRMA*A 598
>gb|AV918871.1|AV918871 AV918871 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags22i15 3', mRNA sequence
Length = 630
Score = 173 bits (373), Expect = 7e-043
Identities = 71/118 (60%), Positives = 91/118 (77%)
Frame = +3 / -2
Query: 6 VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKV 185
+AQA+R E LTV G QTRSF YV+D+V GLMKLM G++ GP N+GNPGEF+MLELA+
Sbjct: 593 IAQAIRGEALTVQKPGTQTRSFCYVADMVNGLMKLMNGDNTGPINIGNPGEFTMLELAEN 414
Query: 186 VQDTIDPEAHIEFRPNTADDPHKRKPDISRAKELLGWEPKVPLREGLPRMVTDFRKRI 359
V++ I+PE + NT DDP +RKPDI++AKE+L WEPKV LR+GL M DFR+R+
Sbjct: 413 VKELINPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPKVVLRDGLVLMEDDFRERL 240
Score = 118 bits (253), Expect = 2e-026
Identities = 64/116 (55%), Positives = 75/116 (64%)
Frame = -3 / +1
Query: 355 RLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMVSWTTLA 176
R RKS +M +PSRR TLGSQ R+SFA +MSG GSS VF SG + S+T A
Sbjct: 244 RSRKSSSMSTKPSRRTTLGSQSRTSFAFVMSGFLWRGSSGVFSVIVTVTSGLINSFTFSA 423
Query: 175 SSSMLNSPGLPRLNGPMCSPSMSFISPSTKSETY*KLLVCLPSP*TVKGSFLSA*A 8
SSSM+NSPG P L GP+ SP +SFI P T S T KLLVC+P TV+ S A*A
Sbjct: 424 SSSMVNSPGFPMLMGPVLSPFISFIRPLTISAT*QKLLVCVPGFWTVRASPRMA*A 591
>gb|AV919156.1|AV919156 AV919156 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags4m06 3', mRNA sequence
Length = 721
Score = 173 bits (373), Expect = 7e-043
Identities = 71/118 (60%), Positives = 91/118 (77%)
Frame = +3 / -1
Query: 6 VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKV 185
+AQA+R E LTV G QTRSF YV+D+V GLMKLM G++ GP N+GNPGEF+MLELA+
Sbjct: 556 IAQAIRGEALTVQKPGTQTRSFCYVADMVNGLMKLMNGDNTGPINIGNPGEFTMLELAEN 377
Query: 186 VQDTIDPEAHIEFRPNTADDPHKRKPDISRAKELLGWEPKVPLREGLPRMVTDFRKRI 359
V++ I+PE + NT DDP +RKPDI++AKE+L WEPKV LR+GL M DFR+R+
Sbjct: 376 VKELINPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPKVVLRDGLVLMEDDFRERL 203
Score = 118 bits (253), Expect = 2e-026
Identities = 64/116 (55%), Positives = 75/116 (64%)
Frame = -3 / +3
Query: 355 RLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMVSWTTLA 176
R RKS +M +PSRR TLGSQ R+SFA +MSG GSS VF SG + S+T A
Sbjct: 207 RSRKSSSMSTKPSRRTTLGSQSRTSFAFVMSGFLWRGSSGVFSVIVTVTSGLINSFTFSA 386
Query: 175 SSSMLNSPGLPRLNGPMCSPSMSFISPSTKSETY*KLLVCLPSP*TVKGSFLSA*A 8
SSSM+NSPG P L GP+ SP +SFI P T S T KLLVC+P TV+ S A*A
Sbjct: 387 SSSMVNSPGFPMLMGPVLSPFISFIRPLTISAT*QKLLVCVPGFWTVRASPRMA*A 554
>gb|AV919513.1|AV919513 AV919513 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags6f24 3', mRNA sequence
Length = 658
Score = 173 bits (373), Expect = 7e-043
Identities = 71/118 (60%), Positives = 91/118 (77%)
Frame = +3 / -2
Query: 6 VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKV 185
+AQA+R E LTV G QTRSF YV+D+V GLMKLM G++ GP N+GNPGEF+MLELA+
Sbjct: 621 IAQAIRGEALTVQKPGTQTRSFCYVADMVNGLMKLMNGDNTGPINIGNPGEFTMLELAEN 442
Query: 186 VQDTIDPEAHIEFRPNTADDPHKRKPDISRAKELLGWEPKVPLREGLPRMVTDFRKRI 359
V++ I+PE + NT DDP +RKPDI++AKE+L WEPKV LR+GL M DFR+R+
Sbjct: 441 VKELINPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPKVVLRDGLVLMEDDFRERL 268
Score = 118 bits (253), Expect = 2e-026
Identities = 64/116 (55%), Positives = 75/116 (64%)
Frame = -3 / +2
Query: 355 RLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMVSWTTLA 176
R RKS +M +PSRR TLGSQ R+SFA +MSG GSS VF SG + S+T A
Sbjct: 272 RSRKSSSMSTKPSRRTTLGSQSRTSFAFVMSGFLWRGSSGVFSVIVTVTSGLINSFTFSA 451
Query: 175 SSSMLNSPGLPRLNGPMCSPSMSFISPSTKSETY*KLLVCLPSP*TVKGSFLSA*A 8
SSSM+NSPG P L GP+ SP +SFI P T S T KLLVC+P TV+ S A*A
Sbjct: 452 SSSMVNSPGFPMLMGPVLSPFISFIRPLTISAT*QKLLVCVPGFWTVRASPRMA*A 619
>gb|AV919679.1|AV919679 AV919679 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags7b24 3', mRNA sequence
Length = 628
Score = 173 bits (373), Expect = 7e-043
Identities = 71/118 (60%), Positives = 91/118 (77%)
Frame = +3 / -2
Query: 6 VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKV 185
+AQA+R E LTV G QTRSF YV+D+V GLMKLM G++ GP N+GNPGEF+MLELA+
Sbjct: 594 IAQAIRGEALTVQKPGTQTRSFCYVADMVNGLMKLMNGDNTGPINIGNPGEFTMLELAEN 415
Query: 186 VQDTIDPEAHIEFRPNTADDPHKRKPDISRAKELLGWEPKVPLREGLPRMVTDFRKRI 359
V++ I+PE + NT DDP +RKPDI++AKE+L WEPKV LR+GL M DFR+R+
Sbjct: 414 VKELINPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPKVVLRDGLVLMEDDFRERL 241
Score = 118 bits (253), Expect = 2e-026
Identities = 64/116 (55%), Positives = 75/116 (64%)
Frame = -3 / +2
Query: 355 RLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMVSWTTLA 176
R RKS +M +PSRR TLGSQ R+SFA +MSG GSS VF SG + S+T A
Sbjct: 245 RSRKSSSMSTKPSRRTTLGSQSRTSFAFVMSGFLWRGSSGVFSVIVTVTSGLINSFTFSA 424
Query: 175 SSSMLNSPGLPRLNGPMCSPSMSFISPSTKSETY*KLLVCLPSP*TVKGSFLSA*A 8
SSSM+NSPG P L GP+ SP +SFI P T S T KLLVC+P TV+ S A*A
Sbjct: 425 SSSMVNSPGFPMLMGPVLSPFISFIRPLTISAT*QKLLVCVPGFWTVRASPRMA*A 592
>gb|AV921216.1|AV921216 AV921216 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags1h02 3', mRNA sequence
Length = 628
Score = 173 bits (373), Expect = 7e-043
Identities = 71/118 (60%), Positives = 91/118 (77%)
Frame = +3 / -1
Query: 6 VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKV 185
+AQA+R E LTV G QTRSF YV+D+V GLMKLM G++ GP N+GNPGEF+MLELA+
Sbjct: 592 IAQAIRGEALTVQKPGTQTRSFCYVADMVNGLMKLMNGDNTGPINIGNPGEFTMLELAEN 413
Query: 186 VQDTIDPEAHIEFRPNTADDPHKRKPDISRAKELLGWEPKVPLREGLPRMVTDFRKRI 359
V++ I+PE + NT DDP +RKPDI++AKE+L WEPKV LR+GL M DFR+R+
Sbjct: 412 VKELINPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPKVVLRDGLVLMEDDFRERL 239
Score = 118 bits (253), Expect = 2e-026
Identities = 64/116 (55%), Positives = 75/116 (64%)
Frame = -3 / +3
Query: 355 RLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMVSWTTLA 176
R RKS +M +PSRR TLGSQ R+SFA +MSG GSS VF SG + S+T A
Sbjct: 243 RSRKSSSMSTKPSRRTTLGSQSRTSFAFVMSGFLWRGSSGVFSVIVTVTSGLINSFTFSA 422
Query: 175 SSSMLNSPGLPRLNGPMCSPSMSFISPSTKSETY*KLLVCLPSP*TVKGSFLSA*A 8
SSSM+NSPG P L GP+ SP +SFI P T S T KLLVC+P TV+ S A*A
Sbjct: 423 SSSMVNSPGFPMLMGPVLSPFISFIRPLTISAT*QKLLVCVPGFWTVRASPRMA*A 590
>gb|AV921346.1|AV921346 AV921346 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags23b23 3', mRNA sequence
Length = 613
Score = 173 bits (373), Expect = 7e-043
Identities = 71/118 (60%), Positives = 91/118 (77%)
Frame = +3 / -2
Query: 6 VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKV 185
+AQA+R E LTV G QTRSF YV+D+V GLMKLM G++ GP N+GNPGEF+MLELA+
Sbjct: 594 IAQAIRGEALTVQKPGTQTRSFCYVADMVNGLMKLMNGDNTGPINIGNPGEFTMLELAEN 415
Query: 186 VQDTIDPEAHIEFRPNTADDPHKRKPDISRAKELLGWEPKVPLREGLPRMVTDFRKRI 359
V++ I+PE + NT DDP +RKPDI++AKE+L WEPKV LR+GL M DFR+R+
Sbjct: 414 VKELINPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPKVVLRDGLVLMEDDFRERL 241
Score = 118 bits (253), Expect = 2e-026
Identities = 64/116 (55%), Positives = 75/116 (64%)
Frame = -3 / +2
Query: 355 RLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMVSWTTLA 176
R RKS +M +PSRR TLGSQ R+SFA +MSG GSS VF SG + S+T A
Sbjct: 245 RSRKSSSMSTKPSRRTTLGSQSRTSFAFVMSGFLWRGSSGVFSVIVTVTSGLINSFTFSA 424
Query: 175 SSSMLNSPGLPRLNGPMCSPSMSFISPSTKSETY*KLLVCLPSP*TVKGSFLSA*A 8
SSSM+NSPG P L GP+ SP +SFI P T S T KLLVC+P TV+ S A*A
Sbjct: 425 SSSMVNSPGFPMLMGPVLSPFISFIRPLTISAT*QKLLVCVPGFWTVRASPRMA*A 592
>gb|AV921718.1|AV921718 AV921718 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags12h18 3', mRNA sequence
Length = 626
Score = 173 bits (373), Expect = 7e-043
Identities = 71/118 (60%), Positives = 91/118 (77%)
Frame = +3 / -3
Query: 6 VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKV 185
+AQA+R E LTV G QTRSF YV+D+V GLMKLM G++ GP N+GNPGEF+MLELA+
Sbjct: 498 IAQAIRGEALTVQKPGTQTRSFCYVADMVNGLMKLMNGDNTGPINIGNPGEFTMLELAEN 319
Query: 186 VQDTIDPEAHIEFRPNTADDPHKRKPDISRAKELLGWEPKVPLREGLPRMVTDFRKRI 359
V++ I+PE + NT DDP +RKPDI++AKE+L WEPKV LR+GL M DFR+R+
Sbjct: 318 VKELINPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPKVVLRDGLVLMEDDFRERL 145
Score = 118 bits (253), Expect = 2e-026
Identities = 64/116 (55%), Positives = 75/116 (64%)
Frame = -3 / +2
Query: 355 RLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMVSWTTLA 176
R RKS +M +PSRR TLGSQ R+SFA +MSG GSS VF SG + S+T A
Sbjct: 149 RSRKSSSMSTKPSRRTTLGSQSRTSFAFVMSGFLWRGSSGVFSVIVTVTSGLINSFTFSA 328
Query: 175 SSSMLNSPGLPRLNGPMCSPSMSFISPSTKSETY*KLLVCLPSP*TVKGSFLSA*A 8
SSSM+NSPG P L GP+ SP +SFI P T S T KLLVC+P TV+ S A*A
Sbjct: 329 SSSMVNSPGFPMLMGPVLSPFISFIRPLTISAT*QKLLVCVPGFWTVRASPRMA*A 496
>gb|BJ457809.1|BJ457809 BJ457809 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak29f24 3', mRNA sequence
Length = 605
Score = 173 bits (373), Expect = 7e-043
Identities = 71/118 (60%), Positives = 91/118 (77%)
Frame = +3 / -1
Query: 6 VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKV 185
+AQA+R E LTV G QTRSF YV+D+V GLMKLM G++ GP N+GNPGEF+MLELA+
Sbjct: 596 IAQAIRGEALTVQKPGTQTRSFCYVADMVNGLMKLMNGDNTGPINIGNPGEFTMLELAEN 417
Query: 186 VQDTIDPEAHIEFRPNTADDPHKRKPDISRAKELLGWEPKVPLREGLPRMVTDFRKRI 359
V++ I+PE + NT DDP +RKPDI++AKE+L WEPKV LR+GL M DFR+R+
Sbjct: 416 VKELINPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPKVVLRDGLVLMEDDFRERL 243
Score = 118 bits (253), Expect = 2e-026
Identities = 64/116 (55%), Positives = 75/116 (64%)
Frame = -3 / +1
Query: 355 RLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMVSWTTLA 176
R RKS +M +PSRR TLGSQ R+SFA +MSG GSS VF SG + S+T A
Sbjct: 247 RSRKSSSMSTKPSRRTTLGSQSRTSFAFVMSGFLWRGSSGVFSVIVTVTSGLINSFTFSA 426
Query: 175 SSSMLNSPGLPRLNGPMCSPSMSFISPSTKSETY*KLLVCLPSP*TVKGSFLSA*A 8
SSSM+NSPG P L GP+ SP +SFI P T S T KLLVC+P TV+ S A*A
Sbjct: 427 SSSMVNSPGFPMLMGPVLSPFISFIRPLTISAT*QKLLVCVPGFWTVRASPRMA*A 594
>gb|BJ462617.1|BJ462617 BJ462617 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags29i05 5', mRNA sequence
Length = 604
Score = 173 bits (373), Expect = 7e-043
Identities = 71/118 (60%), Positives = 91/118 (77%)
Frame = +3 / +2
Query: 6 VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKV 185
+AQA+R E LTV G QTRSF YV+D+V GLMKLM G++ GP N+GNPGEF+MLELA+
Sbjct: 239 IAQAIRGEALTVQKPGTQTRSFCYVADMVNGLMKLMNGDNTGPINIGNPGEFTMLELAEN 418
Query: 186 VQDTIDPEAHIEFRPNTADDPHKRKPDISRAKELLGWEPKVPLREGLPRMVTDFRKRI 359
V++ I+PE + NT DDP +RKPDI++AKE+L WEPKV LR+GL M DFR+R+
Sbjct: 419 VKELINPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPKVVLRDGLVLMEDDFRERL 592
Score = 118 bits (253), Expect = 2e-026
Identities = 64/116 (55%), Positives = 75/116 (64%)
Frame = -3 / -2
Query: 355 RLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMVSWTTLA 176
R RKS +M +PSRR TLGSQ R+SFA +MSG GSS VF SG + S+T A
Sbjct: 588 RSRKSSSMSTKPSRRTTLGSQSRTSFAFVMSGFLWRGSSGVFSVIVTVTSGLINSFTFSA 409
Query: 175 SSSMLNSPGLPRLNGPMCSPSMSFISPSTKSETY*KLLVCLPSP*TVKGSFLSA*A 8
SSSM+NSPG P L GP+ SP +SFI P T S T KLLVC+P TV+ S A*A
Sbjct: 408 SSSMVNSPGFPMLMGPVLSPFISFIRPLTISAT*QKLLVCVPGFWTVRASPRMA*A 241
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 269,542,468
Number of Sequences: 312970
Number of extensions: 4118141
Number of successful extensions: 56635
Number of sequences better than 1.0e-020: 177
length of database: 58,378,179
effective HSP length: 51
effective length of database: 42,416,709
effective search space used: 6998756985
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)