TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3230260.2.1
(863 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AV918145.1|AV918145 AV918145 K. Sato unpublished cDNA li... 318 3e-086
gb|AV914084.1|AV914084 AV914084 K. Sato unpublished cDNA li... 303 6e-082
gb|BJ466412.1|BJ466412 BJ466412 K. Sato unpublished cDNA li... 297 5e-080
gb|BJ466618.1|BJ466618 BJ466618 K. Sato unpublished cDNA li... 297 5e-080
gb|AV918687.1|AV918687 AV918687 K. Sato unpublished cDNA li... 294 5e-079
gb|AV919693.1|AV919693 AV919693 K. Sato unpublished cDNA li... 294 5e-079
gb|AV920406.1|AV920406 AV920406 K. Sato unpublished cDNA li... 294 5e-079
gb|AV919125.1|AV919125 AV919125 K. Sato unpublished cDNA li... 285 3e-076
gb|CA013907.1|CA013907 HT09N23r HT Hordeum vulgare subsp. v... 273 8e-073
gb|CB876883.1|CB876883 HP02M04T HP Hordeum vulgare subsp. v... 245 2e-064
gb|CB879567.1|CB879567 HP02M04w HP Hordeum vulgare subsp. v... 245 2e-064
gb|BJ464456.1|BJ464456 BJ464456 K. Sato unpublished cDNA li... 244 5e-064
gb|BE195648.3|BE195648 HVSMEh0090A21f Hordeum vulgare 5-45 ... 205 3e-052
gb|BG367870.1|BG367870 HVSMEi0014B22f Hordeum vulgare 20 DA... 192 3e-048
gb|BU988879.1|BU988879 HF18P19r HF Hordeum vulgare subsp. v... 188 3e-047
gb|CA010479.1|CA010479 HT09N23u HT Hordeum vulgare subsp. v... 185 2e-046
gb|BU989165.1|BU989165 HF19P19r HF Hordeum vulgare subsp. v... 179 2e-044
gb|BJ457744.1|BJ457744 BJ457744 K. Sato unpublished cDNA li... 144 6e-042
gb|BE559021.2|BE559021 HV_CEb0022F12f Hordeum vulgare seedl... 168 3e-041
gb|BJ463463.1|BJ463463 BJ463463 K. Sato unpublished cDNA li... 162 3e-039
gb|AL506722.1|AL506722 AL506722 Hordeum vulgare Barke devel... 160 9e-039
gb|CB876594.1|CB876594 HX11M09w HX Hordeum vulgare subsp. v... 160 1e-038
gb|BJ464137.1|BJ464137 BJ464137 K. Sato unpublished cDNA li... 157 6e-038
gb|CB876200.1|CB876200 HX10J08w HX Hordeum vulgare subsp. v... 157 6e-038
gb|BJ450325.1|BJ450325 BJ450325 K. Sato unpublished cDNA li... 156 2e-037
gb|AV836830.1|AV836830 AV836830 K. Sato unpublished cDNA li... 127 1e-035
gb|BJ459873.1|BJ459873 BJ459873 K. Sato unpublished cDNA li... 149 2e-035
gb|CA013420.1|CA013420 HT08G10r HT Hordeum vulgare subsp. v... 144 5e-034
gb|BE454948.2|BE454948 HVSMEh0095J23f Hordeum vulgare 5-45 ... 142 3e-033
gb|BU989665.1|BU989665 HF22F21r HF Hordeum vulgare subsp. v... 137 1e-031
gb|CA027702.1|CA027702 HZ59M02r HZ Hordeum vulgare subsp. v... 136 2e-031
gb|BJ452324.1|BJ452324 BJ452324 K. Sato unpublished cDNA li... 130 9e-031
gb|BI960410.1|BI960410 HVSMEn0024I04f Hordeum vulgare rachi... 131 6e-030
gb|BU987846.1|BU987846 HF15O20r HF Hordeum vulgare subsp. v... 127 6e-029
gb|BI958488.1|BI958488 HVSMEn0015E11f Hordeum vulgare rachi... 124 7e-028
gb|AV936413.1|AV936413 AV936413 K. Sato unpublished cDNA li... 116 2e-027
gb|CA007077.1|CA007077 HU06K19r HU Hordeum vulgare subsp. v... 122 2e-027
gb|AV913397.1|AV913397 AV913397 K. Sato unpublished cDNA li... 120 9e-027
gb|AV931570.1|AV931570 AV931570 K. Sato unpublished cDNA li... 120 9e-027
gb|AV913390.1|AV913390 AV913390 K. Sato unpublished cDNA li... 120 1e-026
gb|AV915311.1|AV915311 AV915311 K. Sato unpublished cDNA li... 120 1e-026
gb|AV935958.1|AV935958 AV935958 K. Sato unpublished cDNA li... 118 5e-026
gb|BJ459644.1|BJ459644 BJ459644 K. Sato unpublished cDNA li... 118 5e-026
gb|AV936300.1|AV936300 AV936300 K. Sato unpublished cDNA li... 116 1e-025
gb|AV936403.1|AV936403 AV936403 K. Sato unpublished cDNA li... 116 1e-025
gb|BM098690.1|BM098690 EBem08_SQ003_M19_R embryo, 40 DPA, n... 116 2e-025
gb|AV911222.1|AV911222 AV911222 K. Sato unpublished cDNA li... 116 2e-025
gb|BG343982.1|BG343982 HVSMEg0007E19f Hordeum vulgare pre-a... 115 3e-025
gb|BM442085.2|BM442085 EBan01_SQ002_C10_R anther, yellow st... 114 8e-025
gb|BG365391.1|BG365391 HVSMEi0002I06f Hordeum vulgare 20 DA... 112 3e-024
gb|AV918067.1|AV918067 AV918067 K. Sato unpublished cDNA li... 111 7e-024
gb|BI958460.1|BI958460 HVSMEn0015C07f Hordeum vulgare rachi... 109 2e-023
gb|BG415622.2|BG415622 HVSMEk0007D09f Hordeum vulgare testa... 84 7e-023
gb|BE455566.2|BE455566 HVSMEg0017N13f Hordeum vulgare pre-a... 73 9e-023
gb|BG369084.2|BG369084 HVSMEi0021K17f Hordeum vulgare 20 DA... 106 2e-022
gb|BM816674.1|BM816674 HB01C06_T3.ab1 HB Hordeum vulgare su... 105 3e-022
gb|BU968989.1|BU968989 HB10D02r BC Hordeum vulgare subsp. v... 59 2e-021
gb|BJ474296.1|BJ474296 BJ474296 K. Sato unpublished cDNA li... 70 2e-021
gb|BG415627.1|BG415627 HVSMEk0007E01f Hordeum vulgare testa... 59 3e-021
gb|BU989611.1|BU989611 HF22D10r HF Hordeum vulgare subsp. v... 59 3e-021
gb|BQ467661.1|BQ467661 HS04H17r HS Hordeum vulgare subsp. v... 101 6e-021
gb|BQ763205.1|BQ763205 EBro02_SQ007_F14_R root, 3 week, hyd... 101 6e-021
>gb|AV918145.1|AV918145 AV918145 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags20a13 3', mRNA sequence
Length = 767
Score = 318 bits (688), Expect = 3e-086
Identities = 130/203 (64%), Positives = 155/203 (76%)
Frame = -2 / -3
Query: 844 KAKRXXXXXXXXXVFNNPDWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHEAFAYAA 665
K KR VFNNP+WPKG+ FTEDSWSD + CRK E+WY LSKT AE EAFAYAA
Sbjct: 723 KVKRVVIVSSCAAVFNNPNWPKGKVFTEDSWSDEDLCRKGEDWYLLSKTRAEREAFAYAA 544
Query: 664 KTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIKGDQEIVKDGPKNLVDVRDVAGALLL 485
KTG+D+V I PSLV+GPL+QP VN S K+ L Y+KG+ E V++ NLVDVRDVA ALLL
Sbjct: 543 KTGMDVVAILPSLVLGPLMQPTVNASSKILLKYLKGEHETVENRFWNLVDVRDVADALLL 364
Query: 484 AYENLQASGRYLCSSPAIRVSDIVNILKTEYPTYTYPQKFVEAEGSNTYNTEKLRKLGWT 305
AYEN +ASGRY+CS I+VSD++NILKT YPTYTYP+ F E E ++EKL+KLGWT
Sbjct: 363 AYENPEASGRYICSPVRIKVSDVINILKTLYPTYTYPKNFTEVEEGKVMSSEKLQKLGWT 184
Query: 304 SRPMEDTLRDSIECYRAMGILN* 236
RP+E TL DS+E Y+A GILN*
Sbjct: 183 FRPVEKTLGDSVESYKASGILN* 115
Score = 201 bits (434), Expect(3) = 2e-058
Identities = 104/188 (55%), Positives = 108/188 (57%)
Frame = +3 / +2
Query: 231 EAQFRMPIAL*HSMLSRRVSSMGLEVHPSFRSFSVLYVLLPSASTNF*G*VYVGYSVFSM 410
+AQFRMP AL* S LS RV S GL+VHPSF SFS L L S S F G*VYVGY VF M
Sbjct: 110 DAQFRMPDAL*DSTLSPRVFSTGLKVHPSF*SFSELITLPSSTSVKFLG*VYVGYKVFRM 289
Query: 411 FTISETLIAGELQRYRPDACRFXXXXXXXXXXXXXXXXFLGXXXXXXXXXXXXXRKTLTL 590
F SET I LQ YRPDA F F R+ L L
Sbjct: 290 FMTSETFIRTGLQMYRPDASGFSYARRRASATSRTSTRFQNLFSTVSCSPLRYLRRILLL 469
Query: 591 VFTAGCNKGPITNDGQIVTMSSPVLAA*AKASCSANVLERKYHSSFFLQYSPSDQLSSVK 770
FT GC KGP TNDG+I T S PV AA*AKAS SA VLE KY SS FL S SDQLSSV
Sbjct: 470 AFTVGCIKGPSTNDGRIATTSIPVFAA*AKASRSARVLESKYQSSPFLHRSSSDQLSSVN 649
Query: 771 ASPLGQSG 794
PLGQ G
Sbjct: 650 TLPLGQLG 673
Score = 194 bits (418), Expect = 6e-049
Identities = 103/200 (51%), Positives = 125/200 (62%)
Frame = -1 / -2
Query: 833 SCCGIFSGGCVQ*S*LA*GRGLY*G*LVRWGILQKK*GMVFPF*NIGRT*GFCLCSQNWA 654
SC +F CVQ S*LA G+ +Y* LVR G +QK *G+VF F N R *GFCLCS+NW
Sbjct: 712 SCHSVFMCCCVQQS*LAQGQSIY*RQLVRRGSVQKG*GLVFAFQNARRA*GFCLCSENWD 533
Query: 653 RHCNYLPIIGNWTFVATCSKYKC*SLPQLYQRRSGDS*RWTQKSCGCS*CRWCPSVGLRK 474
C+Y IIG W A S+ + *+ PQ+ QRR+ D + +S GC *C C S G+ K
Sbjct: 532 GCCSYSTIIGTWPLDAANSECEQ*NSPQISQRRT*DCRK*ILESSGCP*CCRCSSSGI*K 353
Query: 473 SAGIRTIPLQFTSNKSL*YCKHTEDRISNIHLPSKIR*SGR*QHIQHGEASEARVDL*AH 294
S GI T+ LQ ++NKS * KH+ED ISNIHL K+ GR + E SEARVDL A
Sbjct: 352 SRGIWTVHLQSSTNKSF*CHKHSEDLISNIHLSQKLYGGGRR*SYEF*ETSEARVDLQAC 173
Query: 293 GGHPPRQHRMLQSYGHPELS 234
P RQ R+LQS HPELS
Sbjct: 172 REDPRRQCRILQSIWHPELS 113
Score = 183 bits (395), Expect = 9e-046
Identities = 107/203 (52%), Positives = 126/203 (62%)
Frame = -3 / -1
Query: 843 KRRELLWYLQWRLCSIILTGLRARPLLRIAGQMGNIAEKMRNGISFLKHWQNMRLLLMQP 664
K EL L LCS ILTG RA+ LL+ AGQ AE++R GI F K Q++RLLLMQ
Sbjct: 722 KLSELS*CLHVLLCSTILTGPRAKYLLKTAGQTRICAERVRIGICFPKRAQSVRLLLMQR 543
Query: 663 KLG*TL*LFAHHW*LDLCCNLQ*IQVLKSSSVISKEIRR*LKMDPKILWMFVMSLVPFCW 484
KLG L*LF HHW L C+ Q*++ +K SS ISKE R K+D I WM VM + F W
Sbjct: 542 KLGWML*LFYHHWYLAP*CSQQ*MRAVKFSSNISKENMRL*KIDSGI*WMSVMLPMLFFW 363
Query: 483 LTKICRHQDDTSAVHQQ*ESLIL*TY*RPNIQHTLTLKNSLKRKVATHTTRRSFGS*GGP 304
KI RH D TSAV +*+ L+ *T+*RP IQHTL K + K R+F S*GGP
Sbjct: 362 HMKIQRHLDGTSAVQYE*KFLMS*TF*RPYIQHTLIPKTLRRWKKVKL*VLRNFRS*GGP 183
Query: 303 LGPWRTPSETASNATELWAS*TE 235
G R PSET SN T+ AS*TE
Sbjct: 182 SGL*RRPSETVSNPTKHLAS*TE 114
Score = 183 bits (394), Expect = 1e-045
Identities = 103/201 (51%), Positives = 120/201 (59%)
Frame = +1 / +3
Query: 235 LSSGCP*LCSIRCCLGGCPPWA*RSTLASEASPCCMCCYLPLQRIFEGKCMLDIRSSVCL 414
LSSGC LC IR CL G A*RSTLASE S LP F KCMLDIRSS CL
Sbjct: 114 LSSGCQMLCRIRHCLRGSSLQA*RSTLASEVSQNS*LYLLPPP*SFWDKCMLDIRSSECL 293
Query: 415 QYQRLLLLVNCRGIVLMPADFRKPTEGHQRHHEHPQDFWVHL*LSPDLL*YN*GRL*HLY 594
+Q+LL +++CR V MP DF P E H++HH HP D ++ S LL* *G +
Sbjct: 294 *HQKLLFVLDCRCTVQMPLDFHMPEEEHRQHHGHPLDSRIYFLQSHVLL*DI*GEFYCSH 473
Query: 595 LLQVATKVQLPMMGK*LQCLAQFWLHKQKPHVLPMF*KGNTIPHFFCNIPHLTSYPQ*RP 774
L A++ Q+PMM +*LQ +QF LHKQKPH L F K NT PH FC P LTS Q*
Sbjct: 474 SLLAASRGQVPMMVE*LQHPSQFSLHKQKPHALRAFWKANTNPHPFCTDPRLTSCLQ*IL 653
Query: 775 RP*ASQDY*TQPPLKIPQQLS 837
P AS D *TQ +K QL+
Sbjct: 654 CPWAS*DC*TQQHMKTL*QLA 716
Score = 141 bits (302), Expect(2) = 5e-034
Identities = 63/120 (52%), Positives = 80/120 (66%)
Frame = +2 / +1
Query: 353 FRFNEFLRVSVCWIFGLQYVYNIRDSYCW*TAEVSS*CLQIFVSQQKGTSDITNIHKIFG 532
F + +SVCWI GLQ VY+IR+ Y + TA+V S CL IF+ Q+K +IT+IH I
Sbjct: 232 FHLRKVFGISVCWI*GLQNVYDIRNFYSYWTADVPSRCLWIFICQKKSIGNITDIH*IPE 411
Query: 533 SIFNYLLISFDITEEDFNTCIYCRLQQRSNYQ*WANSYNV*PSFGCISKSLMFCQCFRKE 712
SIF L+ SF+I EE+F I+C L Q + YQ*W NSYN+ PSF CISKSL C F K+
Sbjct: 412 SIFYSLMFSFEIFEENFTARIHCWLHQGAKYQ*W*NSYNIHPSFRCISKSLTLCARFGKQ 591
Score = 37.7 bits (76), Expect(3) = 2e-058
Identities = 16/26 (61%), Positives = 20/26 (76%)
Frame = +2 / +1
Query: 767 KGLALRPVRIIEHSRH*RYHNNSLRF 844
K AL PVRI+EHS *R+++NSL F
Sbjct: 646 KYFALGPVRIVEHSST*RHYDNSLNF 723
Score = 25.8 bits (50), Expect(3) = 2e-058
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +3 / +3
Query: 150 FLIHCLHEEER 182
+L HCLHE ER
Sbjct: 45 YLFHCLHEPER 77
Score = 23.5 bits (45), Expect(2) = 5e-034
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +2 / +1
Query: 239 VQDAHSSVAFDAVSE 283
VQDA V FD VSE
Sbjct: 118 VQDARCFVGFDTVSE 162
>gb|AV914084.1|AV914084 AV914084 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags4k02 5', mRNA sequence
Length = 593
Score = 303 bits (657), Expect = 6e-082
Identities = 123/191 (64%), Positives = 146/191 (76%)
Frame = -2 / +3
Query: 862 KACYEAKAKRXXXXXXXXXVFNNPDWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHE 683
KAC EAK KR VFNNP+WPKG+ FTEDSWSD + CRK E+WY LSKT AE E
Sbjct: 21 KACNEAKVKRVVIVSSCAAVFNNPNWPKGKVFTEDSWSDEDLCRKGEDWYLLSKTRAERE 200
Query: 682 AFAYAAKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIKGDQEIVKDGPKNLVDVRDV 503
AFAYAAKTG+D+V I PSLV+GPL+QP VN S K+ L Y+KG+ E V++ NLVDVRDV
Sbjct: 201 AFAYAAKTGMDVVAILPSLVLGPLMQPTVNASSKILLKYLKGEHETVENRFWNLVDVRDV 380
Query: 502 AGALLLAYENLQASGRYLCSSPAIRVSDIVNILKTEYPTYTYPQKFVEAEGSNTYNTEKL 323
A ALLLAYEN +ASGRY+CS I+VSD++NILKT YPTYTYP+ F E E ++EKL
Sbjct: 381 ADALLLAYENPEASGRYICSPVRIKVSDVINILKTLYPTYTYPKNFTEVEEGKVMSSEKL 560
Query: 322 RKLGWTSRPME 290
+KLGWT RP+E
Sbjct: 561 QKLGWTFRPVE 593
Score = 178 bits (384), Expect = 3e-044
Identities = 94/191 (49%), Positives = 97/191 (50%)
Frame = +3 / -2
Query: 291 SMGLEVHPSFRSFSVLYVLLPSASTNF*G*VYVGYSVFSMFTISETLIAGELQRYRPDAC 470
S GL+VHPSF SFS L L S S F G*VYVGY VF MF SET I LQ YRPDA
Sbjct: 592 STGLKVHPSF*SFSELITLPSSTSVKFLG*VYVGYKVFRMFMTSETFIRTGLQMYRPDAS 413
Query: 471 RFXXXXXXXXXXXXXXXXFLGXXXXXXXXXXXXXRKTLTLVFTAGCNKGPITNDGQIVTM 650
F F R+ L L FT GC KGP TNDG+I T
Sbjct: 412 GFSYARRRASATSRTSTRFQNLFSTVSCSPLRYLRRILLLAFTVGCIKGPSTNDGRIATT 233
Query: 651 SSPVLAA*AKASCSANVLERKYHSSFFLQYSPSDQLSSVKASPLGQSGXXXXXXXXXXXX 830
S PV AA*AKAS SA VLE KY SS FL S SDQLSSV PLGQ G
Sbjct: 232 SIPVFAA*AKASRSARVLESKYQSSPFLHRSSSDQLSSVNTLPLGQLGLLNTAAHEDTMT 53
Query: 831 XXXXXXS*QAF 863
S QAF
Sbjct: 52 TRLTFASLQAF 20
Score = 176 bits (379), Expect = 1e-043
Identities = 94/187 (50%), Positives = 116/187 (62%)
Frame = -1 / +2
Query: 863 ESLL*GQSEESCCGIFSGGCVQ*S*LA*GRGLY*G*LVRWGILQKK*GMVFPF*NIGRT* 684
E L G+S SC +F CVQ S*LA G+ +Y* LVR G +QK *G+VF F N R *
Sbjct: 20 EGLQRGKS*ASCHSVFMCCCVQQS*LAQGQSIY*RQLVRRGSVQKG*GLVFAFQNARRA* 199
Query: 683 GFCLCSQNWARHCNYLPIIGNWTFVATCSKYKC*SLPQLYQRRSGDS*RWTQKSCGCS*C 504
GFCLCS+NW C+Y IIG W A S+ + *+ PQ+ QRR+ D + +S GC *C
Sbjct: 200 GFCLCSENWDGCCSYSTIIGTWPLDAANSECEQ*NSPQISQRRT*DCRK*ILESSGCP*C 379
Query: 503 RWCPSVGLRKSAGIRTIPLQFTSNKSL*YCKHTEDRISNIHLPSKIR*SGR*QHIQHGEA 324
C S G+ KS GI T+ LQ ++NKS * KH+ED ISNIHL K+ GR + E
Sbjct: 380 CRCSSSGI*KSRGIWTVHLQSSTNKSF*CHKHSEDLISNIHLSQKLYGGGRR*SYEF*ET 559
Query: 323 SEARVDL 303
SEARVDL
Sbjct: 560 SEARVDL 580
Score = 168 bits (361), Expect = 4e-041
Identities = 97/188 (51%), Positives = 116/188 (61%)
Frame = -3 / +1
Query: 861 KLAMRPKRRELLWYLQWRLCSIILTGLRARPLLRIAGQMGNIAEKMRNGISFLKHWQNMR 682
+LA R K EL L LCS ILTG RA+ LL+ AGQ AE++R GI F K Q++R
Sbjct: 22 RLATRQKLSELS*CLHVLLCSTILTGPRAKYLLKTAGQTRICAERVRIGICFPKRAQSVR 201
Query: 681 LLLMQPKLG*TL*LFAHHW*LDLCCNLQ*IQVLKSSSVISKEIRR*LKMDPKILWMFVMS 502
LLLMQ KLG L*LF HHW L C+ Q*++ +K SS ISKE R K+D I WM VM
Sbjct: 202 LLLMQRKLGWML*LFYHHWYLAP*CSQQ*MRAVKFSSNISKENMRL*KIDSGI*WMSVML 381
Query: 501 LVPFCWLTKICRHQDDTSAVHQQ*ESLIL*TY*RPNIQHTLTLKNSLKRKVATHTTRRSF 322
+ F W KI RH D TSAV +*+ L+ *T+*RP IQHTL K + K R+F
Sbjct: 382 PMLFFWHMKIQRHLDGTSAVQYE*KFLMS*TF*RPYIQHTLIPKTLRRWKKVKL*VLRNF 561
Query: 321 GS*GGPLG 298
S*GGP G
Sbjct: 562 RS*GGPSG 585
Score = 164 bits (353), Expect = 5e-040
Identities = 94/187 (50%), Positives = 111/187 (59%)
Frame = +1 / -3
Query: 298 A*RSTLASEASPCCMCCYLPLQRIFEGKCMLDIRSSVCLQYQRLLLLVNCRGIVLMPADF 477
A*RSTLASE S LP F KCMLDIRSS CL +Q+LL +++CR V MP DF
Sbjct: 585 A*RSTLASEVSQNS*LYLLPPP*SFWDKCMLDIRSSECL*HQKLLFVLDCRCTVQMPLDF 406
Query: 478 RKPTEGHQRHHEHPQDFWVHL*LSPDLL*YN*GRL*HLYLLQVATKVQLPMMGK*LQCLA 657
P E H++HH HP D ++ S LL* *G + L A++ Q+PMM +*LQ +
Sbjct: 405 HMPEEEHRQHHGHPLDSRIYFLQSHVLL*DI*GEFYCSHSLLAASRGQVPMMVE*LQHPS 226
Query: 658 QFWLHKQKPHVLPMF*KGNTIPHFFCNIPHLTSYPQ*RPRP*ASQDY*TQPPLKIPQQLS 837
QF LHKQKPH L F K NT PH FC P LTS Q* P AS D *TQ +K QL+
Sbjct: 225 QFSLHKQKPHALRAFWKANTNPHPFCTDPRLTSCLQ*ILCPWAS*DC*TQQHMKTL*QLA 46
Query: 838 SLWPHSK 858
L P K
Sbjct: 45 *LLPRCK 25
Score = 141 bits (302), Expect(2) = 6e-040
Identities = 63/120 (52%), Positives = 80/120 (66%)
Frame = +2 / -1
Query: 353 FRFNEFLRVSVCWIFGLQYVYNIRDSYCW*TAEVSS*CLQIFVSQQKGTSDITNIHKIFG 532
F + +SVCWI GLQ VY+IR+ Y + TA+V S CL IF+ Q+K +IT+IH I
Sbjct: 530 FHLRKVFGISVCWI*GLQNVYDIRNFYSYWTADVPSRCLWIFICQKKSIGNITDIH*IPE 351
Query: 533 SIFNYLLISFDITEEDFNTCIYCRLQQRSNYQ*WANSYNV*PSFGCISKSLMFCQCFRKE 712
SIF L+ SF+I EE+F I+C L Q + YQ*W NSYN+ PSF CISKSL C F K+
Sbjct: 350 SIFYSLMFSFEIFEENFTARIHCWLHQGAKYQ*W*NSYNIHPSFRCISKSLTLCARFGKQ 171
Score = 43.2 bits (88), Expect(2) = 6e-040
Identities = 19/31 (61%), Positives = 24/31 (77%)
Frame = +2 / -1
Query: 767 KGLALRPVRIIEHSRH*RYHNNSLRFGLIAS 859
K AL PVRI+EHS *R+++NSL F L+AS
Sbjct: 116 KYFALGPVRIVEHSST*RHYDNSLNFCLVAS 24
>gb|BJ466412.1|BJ466412 BJ466412 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags32a03 3', mRNA sequence
Length = 663
Score = 297 bits (643), Expect = 5e-080
Identities = 121/183 (66%), Positives = 145/183 (79%)
Frame = -2 / -1
Query: 784 PKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHEAFAYAAKTGLDIVTICPSLVIGPLLQ 605
PKG+ FTEDSWSD + CRK E+WY LSKT AE EAFAYAAKTG+D+V I PSLV+GPL+Q
Sbjct: 663 PKGKVFTEDSWSDEDLCRKGEDWYLLSKTRAEREAFAYAAKTGMDVVAILPSLVLGPLMQ 484
Query: 604 PAVNTSVKVFLSYIKGDQEIVKDGPKNLVDVRDVAGALLLAYENLQASGRYLCSSPAIRV 425
P VN S K+ L Y+KG+ E V++ NLVDVRDVA ALLLAYEN +ASGRY+CS I+V
Sbjct: 483 PTVNASSKILLKYLKGEHETVENRFWNLVDVRDVADALLLAYENPEASGRYICSPVRIKV 304
Query: 424 SDIVNILKTEYPTYTYPQKFVEAEGSNTYNTEKLRKLGWTSRPMEDTLRDSIECYRAMGI 245
SD++NILKT YPTYTYP+ F E E ++EKL+KLGWT RP+E TL DS+E Y+A GI
Sbjct: 303 SDVINILKTLYPTYTYPKNFTEVEEGKVMSSEKLQKLGWTFRPVEKTLGDSVESYKASGI 124
Query: 244 LN* 236
LN*
Sbjct: 123 LN* 115
Score = 194 bits (419), Expect = 4e-049
Identities = 101/184 (54%), Positives = 105/184 (57%)
Frame = +3 / +2
Query: 231 EAQFRMPIAL*HSMLSRRVSSMGLEVHPSFRSFSVLYVLLPSASTNF*G*VYVGYSVFSM 410
+AQFRMP AL* S LS RV S GL+VHPSF SFS L L S S F G*VYVGY VF M
Sbjct: 110 DAQFRMPDAL*DSTLSPRVFSTGLKVHPSF*SFSELITLPSSTSVKFLG*VYVGYKVFRM 289
Query: 411 FTISETLIAGELQRYRPDACRFXXXXXXXXXXXXXXXXFLGXXXXXXXXXXXXXRKTLTL 590
F SET I LQ YRPDA F F R+ L L
Sbjct: 290 FMTSETFIRTGLQMYRPDASGFSYARRRASATSRTSTRFQNLFSTVSCSPLRYLRRILLL 469
Query: 591 VFTAGCNKGPITNDGQIVTMSSPVLAA*AKASCSANVLERKYHSSFFLQYSPSDQLSSVK 770
FT GC KGP TNDG+I T S PV AA*AKAS SA VLE KY SS FL S SDQLSSV
Sbjct: 470 AFTVGCIKGPSTNDGRIATTSIPVFAA*AKASRSARVLESKYQSSPFLHRSSSDQLSSVN 649
Query: 771 ASPL 782
PL
Sbjct: 650 TLPL 661
Score = 178 bits (383), Expect = 4e-044
Identities = 93/182 (51%), Positives = 114/182 (62%)
Frame = -1 / -3
Query: 779 GRGLY*G*LVRWGILQKK*GMVFPF*NIGRT*GFCLCSQNWARHCNYLPIIGNWTFVATC 600
G+ +Y* LVR G +QK *G+VF F N R *GFCLCS+NW C+Y IIG W A
Sbjct: 658 GQSIY*RQLVRRGSVQKG*GLVFAFQNARRA*GFCLCSENWDGCCSYSTIIGTWPLDAAN 479
Query: 599 SKYKC*SLPQLYQRRSGDS*RWTQKSCGCS*CRWCPSVGLRKSAGIRTIPLQFTSNKSL* 420
S+ + *+ PQ+ QRR+ D + +S GC *C C S G+ KS GI T+ LQ ++NKS *
Sbjct: 478 SECEQ*NSPQISQRRT*DCRK*ILESSGCP*CCRCSSSGI*KSRGIWTVHLQSSTNKSF* 299
Query: 419 YCKHTEDRISNIHLPSKIR*SGR*QHIQHGEASEARVDL*AHGGHPPRQHRMLQSYGHPE 240
KH+ED ISNIHL K+ GR + E SEARVDL A P RQ R+LQS HPE
Sbjct: 298 CHKHSEDLISNIHLSQKLYGGGRR*SYEF*ETSEARVDLQACREDPRRQCRILQSIWHPE 119
Query: 239 LS 234
LS
Sbjct: 118 LS 113
Score = 174 bits (375), Expect = 5e-043
Identities = 93/178 (52%), Positives = 108/178 (60%)
Frame = +1 / +3
Query: 235 LSSGCP*LCSIRCCLGGCPPWA*RSTLASEASPCCMCCYLPLQRIFEGKCMLDIRSSVCL 414
LSSGC LC IR CL G A*RSTLASE S LP F KCMLDIRSS CL
Sbjct: 114 LSSGCQMLCRIRHCLRGSSLQA*RSTLASEVSQNS*LYLLPPP*SFWDKCMLDIRSSECL 293
Query: 415 QYQRLLLLVNCRGIVLMPADFRKPTEGHQRHHEHPQDFWVHL*LSPDLL*YN*GRL*HLY 594
+Q+LL +++CR V MP DF P E H++HH HP D ++ S LL* *G +
Sbjct: 294 *HQKLLFVLDCRCTVQMPLDFHMPEEEHRQHHGHPLDSRIYFLQSHVLL*DI*GEFYCSH 473
Query: 595 LLQVATKVQLPMMGK*LQCLAQFWLHKQKPHVLPMF*KGNTIPHFFCNIPHLTSYPQ* 768
L A++ Q+PMM +*LQ +QF LHKQKPH L F K NT PH FC P LTS Q*
Sbjct: 474 SLLAASRGQVPMMVE*LQHPSQFSLHKQKPHALRAFWKANTNPHPFCTDPRLTSCLQ* 647
Score = 168 bits (361), Expect = 4e-041
Identities = 96/182 (52%), Positives = 115/182 (63%)
Frame = -3 / -2
Query: 780 RARPLLRIAGQMGNIAEKMRNGISFLKHWQNMRLLLMQPKLG*TL*LFAHHW*LDLCCNL 601
RA+ LL+ AGQ AE++R GI F K Q++RLLLMQ KLG L*LF HHW L C+
Sbjct: 659 RAKYLLKTAGQTRICAERVRIGICFPKRAQSVRLLLMQRKLGWML*LFYHHWYLAP*CSQ 480
Query: 600 Q*IQVLKSSSVISKEIRR*LKMDPKILWMFVMSLVPFCWLTKICRHQDDTSAVHQQ*ESL 421
Q*++ +K SS ISKE R K+D I WM VM + F W KI RH D TSAV +*+ L
Sbjct: 479 Q*MRAVKFSSNISKENMRL*KIDSGI*WMSVMLPMLFFWHMKIQRHLDGTSAVQYE*KFL 300
Query: 420 IL*TY*RPNIQHTLTLKNSLKRKVATHTTRRSFGS*GGPLGPWRTPSETASNATELWAS* 241
+ *T+*RP IQHTL K + K R+F S*GGP G R PSET SN T+ AS*
Sbjct: 299 MS*TF*RPYIQHTLIPKTLRRWKKVKL*VLRNFRS*GGPSGL*RRPSETVSNPTKHLAS* 120
Query: 240 TE 235
TE
Sbjct: 119 TE 114
Score = 141 bits (302), Expect(2) = 5e-034
Identities = 63/120 (52%), Positives = 80/120 (66%)
Frame = +2 / +1
Query: 353 FRFNEFLRVSVCWIFGLQYVYNIRDSYCW*TAEVSS*CLQIFVSQQKGTSDITNIHKIFG 532
F + +SVCWI GLQ VY+IR+ Y + TA+V S CL IF+ Q+K +IT+IH I
Sbjct: 232 FHLRKVFGISVCWI*GLQNVYDIRNFYSYWTADVPSRCLWIFICQKKSIGNITDIH*IPE 411
Query: 533 SIFNYLLISFDITEEDFNTCIYCRLQQRSNYQ*WANSYNV*PSFGCISKSLMFCQCFRKE 712
SIF L+ SF+I EE+F I+C L Q + YQ*W NSYN+ PSF CISKSL C F K+
Sbjct: 412 SIFYSLMFSFEIFEENFTARIHCWLHQGAKYQ*W*NSYNIHPSFRCISKSLTLCARFGKQ 591
Score = 23.5 bits (45), Expect(2) = 5e-034
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +2 / +1
Query: 239 VQDAHSSVAFDAVSE 283
VQDA V FD VSE
Sbjct: 118 VQDARCFVGFDTVSE 162
>gb|BJ466618.1|BJ466618 BJ466618 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags33a09 3', mRNA sequence
Length = 681
Score = 297 bits (643), Expect = 5e-080
Identities = 121/183 (66%), Positives = 145/183 (79%)
Frame = -2 / -1
Query: 784 PKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHEAFAYAAKTGLDIVTICPSLVIGPLLQ 605
PKG+ FTEDSWSD + CRK E+WY LSKT AE EAFAYAAKTG+D+V I PSLV+GPL+Q
Sbjct: 681 PKGKVFTEDSWSDEDLCRKGEDWYLLSKTRAEREAFAYAAKTGMDVVAILPSLVLGPLMQ 502
Query: 604 PAVNTSVKVFLSYIKGDQEIVKDGPKNLVDVRDVAGALLLAYENLQASGRYLCSSPAIRV 425
P VN S K+ L Y+KG+ E V++ NLVDVRDVA ALLLAYEN +ASGRY+CS I+V
Sbjct: 501 PTVNASSKILLKYLKGEHETVENRFWNLVDVRDVADALLLAYENPEASGRYICSPVRIKV 322
Query: 424 SDIVNILKTEYPTYTYPQKFVEAEGSNTYNTEKLRKLGWTSRPMEDTLRDSIECYRAMGI 245
SD++NILKT YPTYTYP+ F E E ++EKL+KLGWT RP+E TL DS+E Y+A GI
Sbjct: 321 SDVINILKTLYPTYTYPKNFTEVEEGKVMSSEKLQKLGWTFRPVEKTLGDSVESYKASGI 142
Query: 244 LN* 236
LN*
Sbjct: 141 LN* 133
Score = 194 bits (419), Expect(2) = 1e-050
Identities = 101/184 (54%), Positives = 105/184 (57%)
Frame = +3 / +2
Query: 231 EAQFRMPIAL*HSMLSRRVSSMGLEVHPSFRSFSVLYVLLPSASTNF*G*VYVGYSVFSM 410
+AQFRMP AL* S LS RV S GL+VHPSF SFS L L S S F G*VYVGY VF M
Sbjct: 128 DAQFRMPDAL*DSTLSPRVFSTGLKVHPSF*SFSELITLPSSTSVKFLG*VYVGYKVFRM 307
Query: 411 FTISETLIAGELQRYRPDACRFXXXXXXXXXXXXXXXXFLGXXXXXXXXXXXXXRKTLTL 590
F SET I LQ YRPDA F F R+ L L
Sbjct: 308 FMTSETFIRTGLQMYRPDASGFSYARRRASATSRTSTRFQNLFSTVSCSPLRYLRRILLL 487
Query: 591 VFTAGCNKGPITNDGQIVTMSSPVLAA*AKASCSANVLERKYHSSFFLQYSPSDQLSSVK 770
FT GC KGP TNDG+I T S PV AA*AKAS SA VLE KY SS FL S SDQLSSV
Sbjct: 488 AFTVGCIKGPSTNDGRIATTSIPVFAA*AKASRSARVLESKYQSSPFLHRSSSDQLSSVN 667
Query: 771 ASPL 782
PL
Sbjct: 668 TLPL 679
Score = 178 bits (383), Expect = 4e-044
Identities = 93/182 (51%), Positives = 114/182 (62%)
Frame = -1 / -3
Query: 779 GRGLY*G*LVRWGILQKK*GMVFPF*NIGRT*GFCLCSQNWARHCNYLPIIGNWTFVATC 600
G+ +Y* LVR G +QK *G+VF F N R *GFCLCS+NW C+Y IIG W A
Sbjct: 676 GQSIY*RQLVRRGSVQKG*GLVFAFQNARRA*GFCLCSENWDGCCSYSTIIGTWPLDAAN 497
Query: 599 SKYKC*SLPQLYQRRSGDS*RWTQKSCGCS*CRWCPSVGLRKSAGIRTIPLQFTSNKSL* 420
S+ + *+ PQ+ QRR+ D + +S GC *C C S G+ KS GI T+ LQ ++NKS *
Sbjct: 496 SECEQ*NSPQISQRRT*DCRK*ILESSGCP*CCRCSSSGI*KSRGIWTVHLQSSTNKSF* 317
Query: 419 YCKHTEDRISNIHLPSKIR*SGR*QHIQHGEASEARVDL*AHGGHPPRQHRMLQSYGHPE 240
KH+ED ISNIHL K+ GR + E SEARVDL A P RQ R+LQS HPE
Sbjct: 316 CHKHSEDLISNIHLSQKLYGGGRR*SYEF*ETSEARVDLQACREDPRRQCRILQSIWHPE 137
Query: 239 LS 234
LS
Sbjct: 136 LS 131
Score = 174 bits (375), Expect = 5e-043
Identities = 93/178 (52%), Positives = 108/178 (60%)
Frame = +1 / +3
Query: 235 LSSGCP*LCSIRCCLGGCPPWA*RSTLASEASPCCMCCYLPLQRIFEGKCMLDIRSSVCL 414
LSSGC LC IR CL G A*RSTLASE S LP F KCMLDIRSS CL
Sbjct: 132 LSSGCQMLCRIRHCLRGSSLQA*RSTLASEVSQNS*LYLLPPP*SFWDKCMLDIRSSECL 311
Query: 415 QYQRLLLLVNCRGIVLMPADFRKPTEGHQRHHEHPQDFWVHL*LSPDLL*YN*GRL*HLY 594
+Q+LL +++CR V MP DF P E H++HH HP D ++ S LL* *G +
Sbjct: 312 *HQKLLFVLDCRCTVQMPLDFHMPEEEHRQHHGHPLDSRIYFLQSHVLL*DI*GEFYCSH 491
Query: 595 LLQVATKVQLPMMGK*LQCLAQFWLHKQKPHVLPMF*KGNTIPHFFCNIPHLTSYPQ* 768
L A++ Q+PMM +*LQ +QF LHKQKPH L F K NT PH FC P LTS Q*
Sbjct: 492 SLLAASRGQVPMMVE*LQHPSQFSLHKQKPHALRAFWKANTNPHPFCTDPRLTSCLQ* 665
Score = 168 bits (361), Expect = 4e-041
Identities = 96/182 (52%), Positives = 115/182 (63%)
Frame = -3 / -2
Query: 780 RARPLLRIAGQMGNIAEKMRNGISFLKHWQNMRLLLMQPKLG*TL*LFAHHW*LDLCCNL 601
RA+ LL+ AGQ AE++R GI F K Q++RLLLMQ KLG L*LF HHW L C+
Sbjct: 677 RAKYLLKTAGQTRICAERVRIGICFPKRAQSVRLLLMQRKLGWML*LFYHHWYLAP*CSQ 498
Query: 600 Q*IQVLKSSSVISKEIRR*LKMDPKILWMFVMSLVPFCWLTKICRHQDDTSAVHQQ*ESL 421
Q*++ +K SS ISKE R K+D I WM VM + F W KI RH D TSAV +*+ L
Sbjct: 497 Q*MRAVKFSSNISKENMRL*KIDSGI*WMSVMLPMLFFWHMKIQRHLDGTSAVQYE*KFL 318
Query: 420 IL*TY*RPNIQHTLTLKNSLKRKVATHTTRRSFGS*GGPLGPWRTPSETASNATELWAS* 241
+ *T+*RP IQHTL K + K R+F S*GGP G R PSET SN T+ AS*
Sbjct: 317 MS*TF*RPYIQHTLIPKTLRRWKKVKL*VLRNFRS*GGPSGL*RRPSETVSNPTKHLAS* 138
Query: 240 TE 235
TE
Sbjct: 137 TE 132
Score = 141 bits (302), Expect(2) = 5e-034
Identities = 63/120 (52%), Positives = 80/120 (66%)
Frame = +2 / +1
Query: 353 FRFNEFLRVSVCWIFGLQYVYNIRDSYCW*TAEVSS*CLQIFVSQQKGTSDITNIHKIFG 532
F + +SVCWI GLQ VY+IR+ Y + TA+V S CL IF+ Q+K +IT+IH I
Sbjct: 250 FHLRKVFGISVCWI*GLQNVYDIRNFYSYWTADVPSRCLWIFICQKKSIGNITDIH*IPE 429
Query: 533 SIFNYLLISFDITEEDFNTCIYCRLQQRSNYQ*WANSYNV*PSFGCISKSLMFCQCFRKE 712
SIF L+ SF+I EE+F I+C L Q + YQ*W NSYN+ PSF CISKSL C F K+
Sbjct: 430 SIFYSLMFSFEIFEENFTARIHCWLHQGAKYQ*W*NSYNIHPSFRCISKSLTLCARFGKQ 609
Score = 25.8 bits (50), Expect(2) = 1e-050
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +3 / +3
Query: 150 FLIHCLHEEER 182
+L HCLHE ER
Sbjct: 63 YLFHCLHEPER 95
Score = 23.5 bits (45), Expect(2) = 5e-034
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +2 / +1
Query: 239 VQDAHSSVAFDAVSE 283
VQDA V FD VSE
Sbjct: 136 VQDARCFVGFDTVSE 180
>gb|AV918687.1|AV918687 AV918687 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags21o04 3', mRNA sequence
Length = 630
Score = 294 bits (636), Expect = 5e-079
Identities = 120/182 (65%), Positives = 144/182 (79%)
Frame = -2 / -1
Query: 781 KGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHEAFAYAAKTGLDIVTICPSLVIGPLLQP 602
KG+ FTEDSWSD + CRK E+WY LSKT AE EAFAYAAKTG+D+V I PSLV+GPL+QP
Sbjct: 630 KGKVFTEDSWSDEDLCRKGEDWYLLSKTRAEREAFAYAAKTGMDVVAILPSLVLGPLMQP 451
Query: 601 AVNTSVKVFLSYIKGDQEIVKDGPKNLVDVRDVAGALLLAYENLQASGRYLCSSPAIRVS 422
VN S K+ L Y+KG+ E V++ NLVDVRDVA ALLLAYEN +ASGRY+CS I+VS
Sbjct: 450 TVNASSKILLKYLKGEHETVENRFWNLVDVRDVADALLLAYENPEASGRYICSPVRIKVS 271
Query: 421 DIVNILKTEYPTYTYPQKFVEAEGSNTYNTEKLRKLGWTSRPMEDTLRDSIECYRAMGIL 242
D++NILKT YPTYTYP+ F E E ++EKL+KLGWT RP+E TL DS+E Y+A GIL
Sbjct: 270 DVINILKTLYPTYTYPKNFTEVEEGKVMSSEKLQKLGWTFRPVEKTLGDSVESYKASGIL 91
Query: 241 N* 236
N*
Sbjct: 90 N* 85
Score = 193 bits (415), Expect = 2e-048
Identities = 100/183 (54%), Positives = 104/183 (56%)
Frame = +3 / +2
Query: 231 EAQFRMPIAL*HSMLSRRVSSMGLEVHPSFRSFSVLYVLLPSASTNF*G*VYVGYSVFSM 410
+AQFRMP AL* S LS RV S GL+VHPSF SFS L L S S F G*VYVGY VF M
Sbjct: 80 DAQFRMPDAL*DSTLSPRVFSTGLKVHPSF*SFSELITLPSSTSVKFLG*VYVGYKVFRM 259
Query: 411 FTISETLIAGELQRYRPDACRFXXXXXXXXXXXXXXXXFLGXXXXXXXXXXXXXRKTLTL 590
F SET I LQ YRPDA F F R+ L L
Sbjct: 260 FMTSETFIRTGLQMYRPDASGFSYARRRASATSRTSTRFQNLFSTVSCSPLRYLRRILLL 439
Query: 591 VFTAGCNKGPITNDGQIVTMSSPVLAA*AKASCSANVLERKYHSSFFLQYSPSDQLSSVK 770
FT GC KGP TNDG+I T S PV AA*AKAS SA VLE KY SS FL S SDQLSSV
Sbjct: 440 AFTVGCIKGPSTNDGRIATTSIPVFAA*AKASRSARVLESKYQSSPFLHRSSSDQLSSVN 619
Query: 771 ASP 779
P
Sbjct: 620 TLP 628
Score = 178 bits (383), Expect = 4e-044
Identities = 93/182 (51%), Positives = 114/182 (62%)
Frame = -1 / -3
Query: 779 GRGLY*G*LVRWGILQKK*GMVFPF*NIGRT*GFCLCSQNWARHCNYLPIIGNWTFVATC 600
G+ +Y* LVR G +QK *G+VF F N R *GFCLCS+NW C+Y IIG W A
Sbjct: 628 GQSIY*RQLVRRGSVQKG*GLVFAFQNARRA*GFCLCSENWDGCCSYSTIIGTWPLDAAN 449
Query: 599 SKYKC*SLPQLYQRRSGDS*RWTQKSCGCS*CRWCPSVGLRKSAGIRTIPLQFTSNKSL* 420
S+ + *+ PQ+ QRR+ D + +S GC *C C S G+ KS GI T+ LQ ++NKS *
Sbjct: 448 SECEQ*NSPQISQRRT*DCRK*ILESSGCP*CCRCSSSGI*KSRGIWTVHLQSSTNKSF* 269
Query: 419 YCKHTEDRISNIHLPSKIR*SGR*QHIQHGEASEARVDL*AHGGHPPRQHRMLQSYGHPE 240
KH+ED ISNIHL K+ GR + E SEARVDL A P RQ R+LQS HPE
Sbjct: 268 CHKHSEDLISNIHLSQKLYGGGRR*SYEF*ETSEARVDLQACREDPRRQCRILQSIWHPE 89
Query: 239 LS 234
LS
Sbjct: 88 LS 83
Score = 174 bits (375), Expect = 5e-043
Identities = 93/178 (52%), Positives = 108/178 (60%)
Frame = +1 / +3
Query: 235 LSSGCP*LCSIRCCLGGCPPWA*RSTLASEASPCCMCCYLPLQRIFEGKCMLDIRSSVCL 414
LSSGC LC IR CL G A*RSTLASE S LP F KCMLDIRSS CL
Sbjct: 84 LSSGCQMLCRIRHCLRGSSLQA*RSTLASEVSQNS*LYLLPPP*SFWDKCMLDIRSSECL 263
Query: 415 QYQRLLLLVNCRGIVLMPADFRKPTEGHQRHHEHPQDFWVHL*LSPDLL*YN*GRL*HLY 594
+Q+LL +++CR V MP DF P E H++HH HP D ++ S LL* *G +
Sbjct: 264 *HQKLLFVLDCRCTVQMPLDFHMPEEEHRQHHGHPLDSRIYFLQSHVLL*DI*GEFYCSH 443
Query: 595 LLQVATKVQLPMMGK*LQCLAQFWLHKQKPHVLPMF*KGNTIPHFFCNIPHLTSYPQ* 768
L A++ Q+PMM +*LQ +QF LHKQKPH L F K NT PH FC P LTS Q*
Sbjct: 444 SLLAASRGQVPMMVE*LQHPSQFSLHKQKPHALRAFWKANTNPHPFCTDPRLTSCLQ* 617
Score = 168 bits (361), Expect = 4e-041
Identities = 96/182 (52%), Positives = 115/182 (63%)
Frame = -3 / -2
Query: 780 RARPLLRIAGQMGNIAEKMRNGISFLKHWQNMRLLLMQPKLG*TL*LFAHHW*LDLCCNL 601
RA+ LL+ AGQ AE++R GI F K Q++RLLLMQ KLG L*LF HHW L C+
Sbjct: 629 RAKYLLKTAGQTRICAERVRIGICFPKRAQSVRLLLMQRKLGWML*LFYHHWYLAP*CSQ 450
Query: 600 Q*IQVLKSSSVISKEIRR*LKMDPKILWMFVMSLVPFCWLTKICRHQDDTSAVHQQ*ESL 421
Q*++ +K SS ISKE R K+D I WM VM + F W KI RH D TSAV +*+ L
Sbjct: 449 Q*MRAVKFSSNISKENMRL*KIDSGI*WMSVMLPMLFFWHMKIQRHLDGTSAVQYE*KFL 270
Query: 420 IL*TY*RPNIQHTLTLKNSLKRKVATHTTRRSFGS*GGPLGPWRTPSETASNATELWAS* 241
+ *T+*RP IQHTL K + K R+F S*GGP G R PSET SN T+ AS*
Sbjct: 269 MS*TF*RPYIQHTLIPKTLRRWKKVKL*VLRNFRS*GGPSGL*RRPSETVSNPTKHLAS* 90
Query: 240 TE 235
TE
Sbjct: 89 TE 84
Score = 141 bits (302), Expect(2) = 5e-034
Identities = 63/120 (52%), Positives = 80/120 (66%)
Frame = +2 / +1
Query: 353 FRFNEFLRVSVCWIFGLQYVYNIRDSYCW*TAEVSS*CLQIFVSQQKGTSDITNIHKIFG 532
F + +SVCWI GLQ VY+IR+ Y + TA+V S CL IF+ Q+K +IT+IH I
Sbjct: 202 FHLRKVFGISVCWI*GLQNVYDIRNFYSYWTADVPSRCLWIFICQKKSIGNITDIH*IPE 381
Query: 533 SIFNYLLISFDITEEDFNTCIYCRLQQRSNYQ*WANSYNV*PSFGCISKSLMFCQCFRKE 712
SIF L+ SF+I EE+F I+C L Q + YQ*W NSYN+ PSF CISKSL C F K+
Sbjct: 382 SIFYSLMFSFEIFEENFTARIHCWLHQGAKYQ*W*NSYNIHPSFRCISKSLTLCARFGKQ 561
Score = 23.5 bits (45), Expect(2) = 5e-034
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +2 / +1
Query: 239 VQDAHSSVAFDAVSE 283
VQDA V FD VSE
Sbjct: 88 VQDARCFVGFDTVSE 132
>gb|AV919693.1|AV919693 AV919693 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags7d04 3', mRNA sequence
Length = 661
Score = 294 bits (636), Expect = 5e-079
Identities = 120/182 (65%), Positives = 144/182 (79%)
Frame = -2 / -1
Query: 781 KGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHEAFAYAAKTGLDIVTICPSLVIGPLLQP 602
KG+ FTEDSWSD + CRK E+WY LSKT AE EAFAYAAKTG+D+V I PSLV+GPL+QP
Sbjct: 661 KGKVFTEDSWSDEDLCRKGEDWYLLSKTRAEREAFAYAAKTGMDVVAILPSLVLGPLMQP 482
Query: 601 AVNTSVKVFLSYIKGDQEIVKDGPKNLVDVRDVAGALLLAYENLQASGRYLCSSPAIRVS 422
VN S K+ L Y+KG+ E V++ NLVDVRDVA ALLLAYEN +ASGRY+CS I+VS
Sbjct: 481 TVNASSKILLKYLKGEHETVENRFWNLVDVRDVADALLLAYENPEASGRYICSPVRIKVS 302
Query: 421 DIVNILKTEYPTYTYPQKFVEAEGSNTYNTEKLRKLGWTSRPMEDTLRDSIECYRAMGIL 242
D++NILKT YPTYTYP+ F E E ++EKL+KLGWT RP+E TL DS+E Y+A GIL
Sbjct: 301 DVINILKTLYPTYTYPKNFTEVEEGKVMSSEKLQKLGWTFRPVEKTLGDSVESYKASGIL 122
Query: 241 N* 236
N*
Sbjct: 121 N* 116
Score = 193 bits (415), Expect(2) = 2e-050
Identities = 100/183 (54%), Positives = 104/183 (56%)
Frame = +3 / +3
Query: 231 EAQFRMPIAL*HSMLSRRVSSMGLEVHPSFRSFSVLYVLLPSASTNF*G*VYVGYSVFSM 410
+AQFRMP AL* S LS RV S GL+VHPSF SFS L L S S F G*VYVGY VF M
Sbjct: 111 DAQFRMPDAL*DSTLSPRVFSTGLKVHPSF*SFSELITLPSSTSVKFLG*VYVGYKVFRM 290
Query: 411 FTISETLIAGELQRYRPDACRFXXXXXXXXXXXXXXXXFLGXXXXXXXXXXXXXRKTLTL 590
F SET I LQ YRPDA F F R+ L L
Sbjct: 291 FMTSETFIRTGLQMYRPDASGFSYARRRASATSRTSTRFQNLFSTVSCSPLRYLRRILLL 470
Query: 591 VFTAGCNKGPITNDGQIVTMSSPVLAA*AKASCSANVLERKYHSSFFLQYSPSDQLSSVK 770
FT GC KGP TNDG+I T S PV AA*AKAS SA VLE KY SS FL S SDQLSSV
Sbjct: 471 AFTVGCIKGPSTNDGRIATTSIPVFAA*AKASRSARVLESKYQSSPFLHRSSSDQLSSVN 650
Query: 771 ASP 779
P
Sbjct: 651 TLP 659
Score = 178 bits (383), Expect = 4e-044
Identities = 93/182 (51%), Positives = 114/182 (62%)
Frame = -1 / -3
Query: 779 GRGLY*G*LVRWGILQKK*GMVFPF*NIGRT*GFCLCSQNWARHCNYLPIIGNWTFVATC 600
G+ +Y* LVR G +QK *G+VF F N R *GFCLCS+NW C+Y IIG W A
Sbjct: 659 GQSIY*RQLVRRGSVQKG*GLVFAFQNARRA*GFCLCSENWDGCCSYSTIIGTWPLDAAN 480
Query: 599 SKYKC*SLPQLYQRRSGDS*RWTQKSCGCS*CRWCPSVGLRKSAGIRTIPLQFTSNKSL* 420
S+ + *+ PQ+ QRR+ D + +S GC *C C S G+ KS GI T+ LQ ++NKS *
Sbjct: 479 SECEQ*NSPQISQRRT*DCRK*ILESSGCP*CCRCSSSGI*KSRGIWTVHLQSSTNKSF* 300
Query: 419 YCKHTEDRISNIHLPSKIR*SGR*QHIQHGEASEARVDL*AHGGHPPRQHRMLQSYGHPE 240
KH+ED ISNIHL K+ GR + E SEARVDL A P RQ R+LQS HPE
Sbjct: 299 CHKHSEDLISNIHLSQKLYGGGRR*SYEF*ETSEARVDLQACREDPRRQCRILQSIWHPE 120
Query: 239 LS 234
LS
Sbjct: 119 LS 114
Score = 174 bits (375), Expect = 5e-043
Identities = 93/178 (52%), Positives = 108/178 (60%)
Frame = +1 / +1
Query: 235 LSSGCP*LCSIRCCLGGCPPWA*RSTLASEASPCCMCCYLPLQRIFEGKCMLDIRSSVCL 414
LSSGC LC IR CL G A*RSTLASE S LP F KCMLDIRSS CL
Sbjct: 115 LSSGCQMLCRIRHCLRGSSLQA*RSTLASEVSQNS*LYLLPPP*SFWDKCMLDIRSSECL 294
Query: 415 QYQRLLLLVNCRGIVLMPADFRKPTEGHQRHHEHPQDFWVHL*LSPDLL*YN*GRL*HLY 594
+Q+LL +++CR V MP DF P E H++HH HP D ++ S LL* *G +
Sbjct: 295 *HQKLLFVLDCRCTVQMPLDFHMPEEEHRQHHGHPLDSRIYFLQSHVLL*DI*GEFYCSH 474
Query: 595 LLQVATKVQLPMMGK*LQCLAQFWLHKQKPHVLPMF*KGNTIPHFFCNIPHLTSYPQ* 768
L A++ Q+PMM +*LQ +QF LHKQKPH L F K NT PH FC P LTS Q*
Sbjct: 475 SLLAASRGQVPMMVE*LQHPSQFSLHKQKPHALRAFWKANTNPHPFCTDPRLTSCLQ* 648
Score = 168 bits (361), Expect = 4e-041
Identities = 96/182 (52%), Positives = 115/182 (63%)
Frame = -3 / -2
Query: 780 RARPLLRIAGQMGNIAEKMRNGISFLKHWQNMRLLLMQPKLG*TL*LFAHHW*LDLCCNL 601
RA+ LL+ AGQ AE++R GI F K Q++RLLLMQ KLG L*LF HHW L C+
Sbjct: 660 RAKYLLKTAGQTRICAERVRIGICFPKRAQSVRLLLMQRKLGWML*LFYHHWYLAP*CSQ 481
Query: 600 Q*IQVLKSSSVISKEIRR*LKMDPKILWMFVMSLVPFCWLTKICRHQDDTSAVHQQ*ESL 421
Q*++ +K SS ISKE R K+D I WM VM + F W KI RH D TSAV +*+ L
Sbjct: 480 Q*MRAVKFSSNISKENMRL*KIDSGI*WMSVMLPMLFFWHMKIQRHLDGTSAVQYE*KFL 301
Query: 420 IL*TY*RPNIQHTLTLKNSLKRKVATHTTRRSFGS*GGPLGPWRTPSETASNATELWAS* 241
+ *T+*RP IQHTL K + K R+F S*GGP G R PSET SN T+ AS*
Sbjct: 300 MS*TF*RPYIQHTLIPKTLRRWKKVKL*VLRNFRS*GGPSGL*RRPSETVSNPTKHLAS* 121
Query: 240 TE 235
TE
Sbjct: 120 TE 115
Score = 141 bits (302), Expect(2) = 5e-034
Identities = 63/120 (52%), Positives = 80/120 (66%)
Frame = +2 / +2
Query: 353 FRFNEFLRVSVCWIFGLQYVYNIRDSYCW*TAEVSS*CLQIFVSQQKGTSDITNIHKIFG 532
F + +SVCWI GLQ VY+IR+ Y + TA+V S CL IF+ Q+K +IT+IH I
Sbjct: 233 FHLRKVFGISVCWI*GLQNVYDIRNFYSYWTADVPSRCLWIFICQKKSIGNITDIH*IPE 412
Query: 533 SIFNYLLISFDITEEDFNTCIYCRLQQRSNYQ*WANSYNV*PSFGCISKSLMFCQCFRKE 712
SIF L+ SF+I EE+F I+C L Q + YQ*W NSYN+ PSF CISKSL C F K+
Sbjct: 413 SIFYSLMFSFEIFEENFTARIHCWLHQGAKYQ*W*NSYNIHPSFRCISKSLTLCARFGKQ 592
Score = 26.7 bits (52), Expect(2) = 2e-050
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = +3 / +1
Query: 129 PIPAYSEFLIHCLHEEER 182
P +L HCLHE ER
Sbjct: 25 PCDCVPAYLFHCLHEPER 78
Score = 23.5 bits (45), Expect(2) = 5e-034
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +2 / +2
Query: 239 VQDAHSSVAFDAVSE 283
VQDA V FD VSE
Sbjct: 119 VQDARCFVGFDTVSE 163
>gb|AV920406.1|AV920406 AV920406 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags13n08 3', mRNA sequence
Length = 662
Score = 294 bits (636), Expect = 5e-079
Identities = 120/182 (65%), Positives = 144/182 (79%)
Frame = -2 / -3
Query: 781 KGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHEAFAYAAKTGLDIVTICPSLVIGPLLQP 602
KG+ FTEDSWSD + CRK E+WY LSKT AE EAFAYAAKTG+D+V I PSLV+GPL+QP
Sbjct: 660 KGKVFTEDSWSDEDLCRKGEDWYLLSKTRAEREAFAYAAKTGMDVVAILPSLVLGPLMQP 481
Query: 601 AVNTSVKVFLSYIKGDQEIVKDGPKNLVDVRDVAGALLLAYENLQASGRYLCSSPAIRVS 422
VN S K+ L Y+KG+ E V++ NLVDVRDVA ALLLAYEN +ASGRY+CS I+VS
Sbjct: 480 TVNASSKILLKYLKGEHETVENRFWNLVDVRDVADALLLAYENPEASGRYICSPVRIKVS 301
Query: 421 DIVNILKTEYPTYTYPQKFVEAEGSNTYNTEKLRKLGWTSRPMEDTLRDSIECYRAMGIL 242
D++NILKT YPTYTYP+ F E E ++EKL+KLGWT RP+E TL DS+E Y+A GIL
Sbjct: 300 DVINILKTLYPTYTYPKNFTEVEEGKVMSSEKLQKLGWTFRPVEKTLGDSVESYKASGIL 121
Query: 241 N* 236
N*
Sbjct: 120 N* 115
Score = 194 bits (419), Expect(2) = 1e-050
Identities = 101/184 (54%), Positives = 105/184 (57%)
Frame = +3 / +2
Query: 231 EAQFRMPIAL*HSMLSRRVSSMGLEVHPSFRSFSVLYVLLPSASTNF*G*VYVGYSVFSM 410
+AQFRMP AL* S LS RV S GL+VHPSF SFS L L S S F G*VYVGY VF M
Sbjct: 110 DAQFRMPDAL*DSTLSPRVFSTGLKVHPSF*SFSELITLPSSTSVKFLG*VYVGYKVFRM 289
Query: 411 FTISETLIAGELQRYRPDACRFXXXXXXXXXXXXXXXXFLGXXXXXXXXXXXXXRKTLTL 590
F SET I LQ YRPDA F F R+ L L
Sbjct: 290 FMTSETFIRTGLQMYRPDASGFSYARRRASATSRTSTRFQNLFSTVSCSPLRYLRRILLL 469
Query: 591 VFTAGCNKGPITNDGQIVTMSSPVLAA*AKASCSANVLERKYHSSFFLQYSPSDQLSSVK 770
FT GC KGP TNDG+I T S PV AA*AKAS SA VLE KY SS FL S SDQLSSV
Sbjct: 470 AFTVGCIKGPSTNDGRIATTSIPVFAA*AKASRSARVLESKYQSSPFLHRSSSDQLSSVN 649
Query: 771 ASPL 782
PL
Sbjct: 650 TLPL 661
Score = 178 bits (383), Expect = 4e-044
Identities = 93/182 (51%), Positives = 114/182 (62%)
Frame = -1 / -2
Query: 779 GRGLY*G*LVRWGILQKK*GMVFPF*NIGRT*GFCLCSQNWARHCNYLPIIGNWTFVATC 600
G+ +Y* LVR G +QK *G+VF F N R *GFCLCS+NW C+Y IIG W A
Sbjct: 658 GQSIY*RQLVRRGSVQKG*GLVFAFQNARRA*GFCLCSENWDGCCSYSTIIGTWPLDAAN 479
Query: 599 SKYKC*SLPQLYQRRSGDS*RWTQKSCGCS*CRWCPSVGLRKSAGIRTIPLQFTSNKSL* 420
S+ + *+ PQ+ QRR+ D + +S GC *C C S G+ KS GI T+ LQ ++NKS *
Sbjct: 478 SECEQ*NSPQISQRRT*DCRK*ILESSGCP*CCRCSSSGI*KSRGIWTVHLQSSTNKSF* 299
Query: 419 YCKHTEDRISNIHLPSKIR*SGR*QHIQHGEASEARVDL*AHGGHPPRQHRMLQSYGHPE 240
KH+ED ISNIHL K+ GR + E SEARVDL A P RQ R+LQS HPE
Sbjct: 298 CHKHSEDLISNIHLSQKLYGGGRR*SYEF*ETSEARVDLQACREDPRRQCRILQSIWHPE 119
Query: 239 LS 234
LS
Sbjct: 118 LS 113
Score = 174 bits (375), Expect = 5e-043
Identities = 93/178 (52%), Positives = 108/178 (60%)
Frame = +1 / +3
Query: 235 LSSGCP*LCSIRCCLGGCPPWA*RSTLASEASPCCMCCYLPLQRIFEGKCMLDIRSSVCL 414
LSSGC LC IR CL G A*RSTLASE S LP F KCMLDIRSS CL
Sbjct: 114 LSSGCQMLCRIRHCLRGSSLQA*RSTLASEVSQNS*LYLLPPP*SFWDKCMLDIRSSECL 293
Query: 415 QYQRLLLLVNCRGIVLMPADFRKPTEGHQRHHEHPQDFWVHL*LSPDLL*YN*GRL*HLY 594
+Q+LL +++CR V MP DF P E H++HH HP D ++ S LL* *G +
Sbjct: 294 *HQKLLFVLDCRCTVQMPLDFHMPEEEHRQHHGHPLDSRIYFLQSHVLL*DI*GEFYCSH 473
Query: 595 LLQVATKVQLPMMGK*LQCLAQFWLHKQKPHVLPMF*KGNTIPHFFCNIPHLTSYPQ* 768
L A++ Q+PMM +*LQ +QF LHKQKPH L F K NT PH FC P LTS Q*
Sbjct: 474 SLLAASRGQVPMMVE*LQHPSQFSLHKQKPHALRAFWKANTNPHPFCTDPRLTSCLQ* 647
Score = 168 bits (361), Expect = 4e-041
Identities = 96/182 (52%), Positives = 115/182 (63%)
Frame = -3 / -1
Query: 780 RARPLLRIAGQMGNIAEKMRNGISFLKHWQNMRLLLMQPKLG*TL*LFAHHW*LDLCCNL 601
RA+ LL+ AGQ AE++R GI F K Q++RLLLMQ KLG L*LF HHW L C+
Sbjct: 659 RAKYLLKTAGQTRICAERVRIGICFPKRAQSVRLLLMQRKLGWML*LFYHHWYLAP*CSQ 480
Query: 600 Q*IQVLKSSSVISKEIRR*LKMDPKILWMFVMSLVPFCWLTKICRHQDDTSAVHQQ*ESL 421
Q*++ +K SS ISKE R K+D I WM VM + F W KI RH D TSAV +*+ L
Sbjct: 479 Q*MRAVKFSSNISKENMRL*KIDSGI*WMSVMLPMLFFWHMKIQRHLDGTSAVQYE*KFL 300
Query: 420 IL*TY*RPNIQHTLTLKNSLKRKVATHTTRRSFGS*GGPLGPWRTPSETASNATELWAS* 241
+ *T+*RP IQHTL K + K R+F S*GGP G R PSET SN T+ AS*
Sbjct: 299 MS*TF*RPYIQHTLIPKTLRRWKKVKL*VLRNFRS*GGPSGL*RRPSETVSNPTKHLAS* 120
Query: 240 TE 235
TE
Sbjct: 119 TE 114
Score = 141 bits (302), Expect(2) = 5e-034
Identities = 63/120 (52%), Positives = 80/120 (66%)
Frame = +2 / +1
Query: 353 FRFNEFLRVSVCWIFGLQYVYNIRDSYCW*TAEVSS*CLQIFVSQQKGTSDITNIHKIFG 532
F + +SVCWI GLQ VY+IR+ Y + TA+V S CL IF+ Q+K +IT+IH I
Sbjct: 232 FHLRKVFGISVCWI*GLQNVYDIRNFYSYWTADVPSRCLWIFICQKKSIGNITDIH*IPE 411
Query: 533 SIFNYLLISFDITEEDFNTCIYCRLQQRSNYQ*WANSYNV*PSFGCISKSLMFCQCFRKE 712
SIF L+ SF+I EE+F I+C L Q + YQ*W NSYN+ PSF CISKSL C F K+
Sbjct: 412 SIFYSLMFSFEIFEENFTARIHCWLHQGAKYQ*W*NSYNIHPSFRCISKSLTLCARFGKQ 591
Score = 25.8 bits (50), Expect(2) = 1e-050
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +3 / +3
Query: 150 FLIHCLHEEER 182
+L HCLHE ER
Sbjct: 45 YLFHCLHEPER 77
Score = 23.5 bits (45), Expect(2) = 5e-034
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +2 / +1
Query: 239 VQDAHSSVAFDAVSE 283
VQDA V FD VSE
Sbjct: 118 VQDARCFVGFDTVSE 162
>gb|AV919125.1|AV919125 AV919125 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags4k02 3', mRNA sequence
Length = 751
Score = 285 bits (616), Expect = 3e-076
Identities = 116/183 (63%), Positives = 142/183 (77%)
Frame = -2 / -2
Query: 784 PKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHEAFAYAAKTGLDIVTICPSLVIGPLLQ 605
P+ + +DSWSD + CRK E+WY LSKT AE EAFAYAAKTG+D+V I PSLV+GPL+Q
Sbjct: 666 PRAKYLLKDSWSDEDLCRKGEDWYLLSKTRAEREAFAYAAKTGMDVVAILPSLVLGPLMQ 487
Query: 604 PAVNTSVKVFLSYIKGDQEIVKDGPKNLVDVRDVAGALLLAYENLQASGRYLCSSPAIRV 425
P VN S K+ L Y+KG+ E V++ NLVDVRDVA ALLLAYEN +ASGRY+CS I+V
Sbjct: 486 PTVNASSKILLKYLKGEHETVENRFWNLVDVRDVADALLLAYENPEASGRYICSPVRIKV 307
Query: 424 SDIVNILKTEYPTYTYPQKFVEAEGSNTYNTEKLRKLGWTSRPMEDTLRDSIECYRAMGI 245
SD++NILKT YPTYTYP+ F E E ++EKL+KLGWT RP+E TL DS+E Y+A GI
Sbjct: 306 SDVINILKTLYPTYTYPKNFTEVEEGKVMSSEKLQKLGWTFRPVEKTLGDSVESYKASGI 127
Query: 244 LN* 236
LN*
Sbjct: 126 LN* 118
Score = 189 bits (408), Expect(3) = 4e-052
Identities = 100/185 (54%), Positives = 104/185 (56%)
Frame = +3 / +2
Query: 231 EAQFRMPIAL*HSMLSRRVSSMGLEVHPSFRSFSVLYVLLPSASTNF*G*VYVGYSVFSM 410
+AQFRMP AL* S LS RV S GL+VHPSF SFS L L S S F G*VYVGY VF M
Sbjct: 113 DAQFRMPDAL*DSTLSPRVFSTGLKVHPSF*SFSELITLPSSTSVKFLG*VYVGYKVFRM 292
Query: 411 FTISETLIAGELQRYRPDACRFXXXXXXXXXXXXXXXXFLGXXXXXXXXXXXXXRKTLTL 590
F SET I LQ YRPDA F F R+ L L
Sbjct: 293 FMTSETFIRTGLQMYRPDASGFSYARRRASATSRTSTRFQNLFSTVSCSPLRYLRRILLL 472
Query: 591 VFTAGCNKGPITNDGQIVTMSSPVLAA*AKASCSANVLERKYHSSFFLQYSPSDQLSSVK 770
FT GC KGP TNDG+I T S PV AA*AKAS SA VLE KY SS FL S SDQLS K
Sbjct: 473 AFTVGCIKGPSTNDGRIATTSIPVFAA*AKASRSARVLESKYQSSPFLHRSSSDQLSFSK 652
Query: 771 ASPLG 785
LG
Sbjct: 653 YFALG 667
Score = 174 bits (374), Expect = 7e-043
Identities = 91/174 (52%), Positives = 106/174 (60%)
Frame = +1 / +3
Query: 235 LSSGCP*LCSIRCCLGGCPPWA*RSTLASEASPCCMCCYLPLQRIFEGKCMLDIRSSVCL 414
LSSGC LC IR CL G A*RSTLASE S LP F KCMLDIRSS CL
Sbjct: 117 LSSGCQMLCRIRHCLRGSSLQA*RSTLASEVSQNS*LYLLPPP*SFWDKCMLDIRSSECL 296
Query: 415 QYQRLLLLVNCRGIVLMPADFRKPTEGHQRHHEHPQDFWVHL*LSPDLL*YN*GRL*HLY 594
+Q+LL +++CR V MP DF P E H++HH HP D ++ S LL* *G +
Sbjct: 297 *HQKLLFVLDCRCTVQMPLDFHMPEEEHRQHHGHPLDSRIYFLQSHVLL*DI*GEFYCSH 476
Query: 595 LLQVATKVQLPMMGK*LQCLAQFWLHKQKPHVLPMF*KGNTIPHFFCNIPHLTS 756
L A++ Q+PMM +*LQ +QF LHKQKPH L F K NT PH FC P LTS
Sbjct: 477 SLLAASRGQVPMMVE*LQHPSQFSLHKQKPHALRAFWKANTNPHPFCTDPRLTS 638
Score = 173 bits (372), Expect(2) = 7e-045
Identities = 90/174 (51%), Positives = 109/174 (62%)
Frame = -1 / -1
Query: 755 LVRWGILQKK*GMVFPF*NIGRT*GFCLCSQNWARHCNYLPIIGNWTFVATCSKYKC*SL 576
LVR G +QK *G+VF F N R *GFCLCS+NW C+Y IIG W A S+ + *+
Sbjct: 637 LVRRGSVQKG*GLVFAFQNARRA*GFCLCSENWDGCCSYSTIIGTWPLDAANSECEQ*NS 458
Query: 575 PQLYQRRSGDS*RWTQKSCGCS*CRWCPSVGLRKSAGIRTIPLQFTSNKSL*YCKHTEDR 396
PQ+ QRR+ D + +S GC *C C S G+ KS GI T+ LQ ++NKS * KH+ED
Sbjct: 457 PQISQRRT*DCRK*ILESSGCP*CCRCSSSGI*KSRGIWTVHLQSSTNKSF*CHKHSEDL 278
Query: 395 ISNIHLPSKIR*SGR*QHIQHGEASEARVDL*AHGGHPPRQHRMLQSYGHPELS 234
ISNIHL K+ GR + E SEARVDL A P RQ R+LQS HPELS
Sbjct: 277 ISNIHLSQKLYGGGRR*SYEF*ETSEARVDLQACREDPRRQCRILQSIWHPELS 116
Score = 160 bits (345), Expect = 7e-039
Identities = 92/176 (52%), Positives = 110/176 (62%)
Frame = -3 / -3
Query: 762 RIAGQMGNIAEKMRNGISFLKHWQNMRLLLMQPKLG*TL*LFAHHW*LDLCCNLQ*IQVL 583
+ AGQ AE++R GI F K Q++RLLLMQ KLG L*LF HHW L C+ Q*++ +
Sbjct: 644 KTAGQTRICAERVRIGICFPKRAQSVRLLLMQRKLGWML*LFYHHWYLAP*CSQQ*MRAV 465
Query: 582 KSSSVISKEIRR*LKMDPKILWMFVMSLVPFCWLTKICRHQDDTSAVHQQ*ESLIL*TY* 403
K SS ISKE R K+D I WM VM + F W KI RH D TSAV +*+ L+ *T+*
Sbjct: 464 KFSSNISKENMRL*KIDSGI*WMSVMLPMLFFWHMKIQRHLDGTSAVQYE*KFLMS*TF* 285
Query: 402 RPNIQHTLTLKNSLKRKVATHTTRRSFGS*GGPLGPWRTPSETASNATELWAS*TE 235
RP IQHTL K + K R+F S*GGP G R PSET SN T+ AS*TE
Sbjct: 284 RPYIQHTLIPKTLRRWKKVKL*VLRNFRS*GGPSGL*RRPSETVSNPTKHLAS*TE 117
Score = 141 bits (302), Expect(2) = 5e-034
Identities = 63/120 (52%), Positives = 80/120 (66%)
Frame = +2 / +1
Query: 353 FRFNEFLRVSVCWIFGLQYVYNIRDSYCW*TAEVSS*CLQIFVSQQKGTSDITNIHKIFG 532
F + +SVCWI GLQ VY+IR+ Y + TA+V S CL IF+ Q+K +IT+IH I
Sbjct: 235 FHLRKVFGISVCWI*GLQNVYDIRNFYSYWTADVPSRCLWIFICQKKSIGNITDIH*IPE 414
Query: 533 SIFNYLLISFDITEEDFNTCIYCRLQQRSNYQ*WANSYNV*PSFGCISKSLMFCQCFRKE 712
SIF L+ SF+I EE+F I+C L Q + YQ*W NSYN+ PSF CISKSL C F K+
Sbjct: 415 SIFYSLMFSFEIFEENFTARIHCWLHQGAKYQ*W*NSYNIHPSFRCISKSLTLCARFGKQ 594
Score = 28.1 bits (55), Expect(3) = 4e-052
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +2 / +3
Query: 773 LALRPVRIIEHSRH*RYHNNSLRF 844
L L + I+EHS *R+++NSL F
Sbjct: 657 LPLGQLGIVEHSST*RHYDNSLNF 728
Score = 27.6 bits (54), Expect(2) = 7e-045
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = -2 / -1
Query: 793 PDWPKGEAFTE 761
P+WPKG+ FTE
Sbjct: 676 PNWPKGKVFTE 644
Score = 25.8 bits (50), Expect(3) = 4e-052
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +3 / +3
Query: 150 FLIHCLHEEER 182
+L HCLHE ER
Sbjct: 48 YLFHCLHEPER 80
Score = 23.5 bits (45), Expect(2) = 5e-034
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +2 / +1
Query: 239 VQDAHSSVAFDAVSE 283
VQDA V FD VSE
Sbjct: 121 VQDARCFVGFDTVSE 165
>gb|CA013907.1|CA013907 HT09N23r HT Hordeum vulgare subsp. vulgare cDNA clone HT09N23
5-PRIME, mRNA sequence
Length = 636
Score = 273 bits (591), Expect = 8e-073
Identities = 108/166 (65%), Positives = 133/166 (80%)
Frame = -2 / +3
Query: 862 KACYEAKAKRXXXXXXXXXVFNNPDWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHE 683
KACYEAK KR V NNP+WPKG+ F EDSWSD + CRK E+WYFLSKTLAE E
Sbjct: 114 KACYEAKVKRVVMVSSVAAVSNNPNWPKGKFFDEDSWSDEDLCRKGEDWYFLSKTLAERE 293
Query: 682 AFAYAAKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIKGDQEIVKDGPKNLVDVRDV 503
AFAYA KTGLD+VTICPSLVIGPL+Q VNTS + ++Y+KG+++ V++ +NLVDVRDV
Sbjct: 294 AFAYAEKTGLDVVTICPSLVIGPLMQSTVNTSSNILINYLKGERDTVENKLRNLVDVRDV 473
Query: 502 AGALLLAYENLQASGRYLCSSPAIRVSDIVNILKTEYPTYTYPQKF 365
A ALLLAYE +ASGRY+CSS ++VSD++++LKT YPTYTYP+ F
Sbjct: 474 ADALLLAYEKPEASGRYICSSVPVKVSDMISVLKTLYPTYTYPKNF 611
Score = 192 bits (413), Expect = 3e-048
Identities = 96/166 (57%), Positives = 116/166 (69%)
Frame = -1 / +2
Query: 863 ESLL*GQSEESCCGIFSGGCVQ*S*LA*GRGLY*G*LVRWGILQKK*GMVFPF*NIGRT* 684
ESLL G+S SC GIFS CVQ*S*LA*G+ L * LVR G LQK *G+VFPF N R *
Sbjct: 113 ESLLRGES*ASCHGIFSCCCVQ*S*LA*GQILR*RQLVRRGSLQKG*GLVFPFQNARRA* 292
Query: 683 GFCLCSQNWARHCNYLPIIGNWTFVATCSKYKC*SLPQLYQRRSGDS*RWTQKSCGCS*C 504
GFCLC +NW CNY+PI+GNW A SKY+ * L QRR+ + TQ+S GCS*C
Sbjct: 293 GFCLCRKNWVGCCNYMPIVGNWPLDAVYSKYEQ*YSH*LSQRRT*YCRK*TQESSGCS*C 472
Query: 503 RWCPSVGLRKSAGIRTIPLQFTSNKSL*YCKHTEDRISNIHLPSKI 366
C S+G+ K+ G+ T+ LQF+++KSL*Y K TED IS+IHL K+
Sbjct: 473 CRCSSIGI*KTRGVWTVHLQFSTSKSL*YDKRTEDLISDIHLSQKL 610
Score = 172 bits (371), Expect = 2e-042
Identities = 93/164 (56%), Positives = 102/164 (62%)
Frame = +1 / -1
Query: 370 FEGKCMLDIRSSVCLQYQRLLLLVNCRGIVLMPADFRKPTEGHQRHHEHPQDFWVHL*LS 549
F KCM DIRSSV L YQRLLL++NCR V P F P E H++HHEHP D V+
Sbjct: 606 FWDKCMSDIRSSVRLSYQRLLLVLNCRCTVQTPLVFHMPIEEHRQHHEHPLDS*VYFLQY 427
Query: 550 PDLL*YN*GRL*HLYLLQVATKVQLPMMGK*LQCLAQFWLHKQKPHVLPMF*KGNTIPHF 729
LL* N* YLL A++ QLP MG *LQ QF+LHKQKPH L F KGNT PH
Sbjct: 426 HVLL*DN**EYYCSYLL*TASRGQLPTMGI*LQHPTQFFLHKQKPHALRAFWKGNTNPHP 247
Query: 730 FCNIPHLTSYPQ*RPRP*ASQDY*TQPPLKIPQQLSSLWPHSKL 861
FC P LTS R P*AS DY TQ LKIP QL+ L P SKL
Sbjct: 246 FCRDPRLTSCLHRRICP*AS*DYWTQQQLKIP*QLA*LSPRSKL 115
Score = 159 bits (342), Expect = 2e-038
Identities = 83/165 (50%), Positives = 87/165 (52%)
Frame = +3 / -3
Query: 369 F*G*VYVGYSVFSMFTISETLIAGELQRYRPDACRFXXXXXXXXXXXXXXXXFLGXXXXX 548
F G*VYVGY VFS ISET ELQ YRPDA F FL
Sbjct: 607 FLG*VYVGYKVFSTLIISETFTGTELQMYRPDASGFSYANRRASATSRTSTRFLSLFSTV 428
Query: 549 XXXXXXXXRKTLTLVFTAGCNKGPITNDGQIVTMSSPVLAA*AKASCSANVLERKYHSSF 728
+ L LVFT C KGPITNDG IVT S+PV +A*AKAS SA+VLERKY SS
Sbjct: 427 SRSPLR*LMRILLLVFTVDCIKGPITNDGHIVTTSNPVFSA*AKASRSASVLERKYQSSP 248
Query: 729 FLQYSPSDQLSSVKASPLGQSGXXXXXXXXXXXXXXXXXXS*QAF 863
FLQ S SDQLSS K PLGQ G S*QAF
Sbjct: 247 FLQRSSSDQLSSSKNLPLGQLGLLDTAATEDTMTTRLTFAS*QAF 113
Score = 131 bits (280), Expect(2) = 1e-039
Identities = 61/112 (54%), Positives = 73/112 (65%)
Frame = +2 / -2
Query: 377 VSVCWIFGLQYVYNIRDSYCW*TAEVSS*CLQIFVSQQKGTSDITNIHKIFGSIFNYLLI 556
+SVC I GLQY Y+IRD Y +*TA+V S L F+ Q K +ITNIH I IF +
Sbjct: 599 ISVCRI*GLQYAYHIRDFYWY*TADVPSRRLWFFICQ*KSIGNITNIH*IPEFIFYSITF 420
Query: 557 SFDITEEDFNTCIYCRLQQRSNYQ*WANSYNV*PSFGCISKSLMFCQCFRKE 712
SF+I E+ IYCRL Q +NYQ WA SYN+ PSF CISKSL C+ F KE
Sbjct: 419 SFEIINENITARIYCRLHQGANYQRWAYSYNIQPSFFCISKSLTLCERFGKE 264
Score = 118 bits (253), Expect(2) = 2e-037
Identities = 60/102 (58%), Positives = 71/102 (69%)
Frame = -3 / +1
Query: 861 KLAMRPKRRELLWYLQWRLCSIILTGLRARPLLRIAGQMGNIAEKMRNGISFLKHWQNMR 682
KLA R K EL WYLQ LC IILTGLRA ++ AGQ AE++R GISF K Q++R
Sbjct: 115 KLATRRKLSELSWYLQLLLCPIILTGLRANSSMKTAGQTRISAERVRIGISFPKRSQSVR 294
Query: 681 LLLMQPKLG*TL*LFAHHW*LDLCCNLQ*IQVLKSSSVISKE 556
LLLMQ KLG L*L+AH W*L C+LQ*I+ + S +ISKE
Sbjct: 295 LLLMQKKLGWML*LYAHRW*LAP*CSLQ*IRAVIFSLIISKE 420
Score = 57.4 bits (119), Expect(2) = 2e-037
Identities = 31/57 (54%), Positives = 36/57 (63%)
Frame = -3 / +1
Query: 540 KMDPKILWMFVMSLVPFCWLTKICRHQDDTSAVHQQ*ESLIL*TY*RPNIQHTLTLK 370
K++ I WMFVM + F W K R D TSAV Q*+SLI * Y*RP I+HTL K
Sbjct: 436 KINSGI*WMFVMLPMLFYWHMKNQRRLDGTSAVQYQ*KSLI**AY*RPYIRHTLIPK 606
Score = 52.4 bits (108), Expect(2) = 1e-039
Identities = 22/29 (75%), Positives = 25/29 (86%)
Frame = +2 / -2
Query: 776 ALRPVRIIEHSRH*RYHNNSLRFGLIASF 862
ALRPVRII HS +*RYH+NSL F L+ASF
Sbjct: 200 ALRPVRIIGHSSN*RYHDNSLNFRLVASF 114
>gb|CB876883.1|CB876883 HP02M04T HP Hordeum vulgare subsp. vulgare cDNA clone HP02M04
5-PRIME, mRNA sequence
Length = 633
Score = 245 bits (530), Expect = 2e-064
Identities = 98/152 (64%), Positives = 126/152 (82%)
Frame = -2 / +3
Query: 691 EHEAFAYAAKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIKGDQEIVKDGPKNLVDV 512
E EAFAYA KTGLD+VTICPSLVIGPL+Q VNTS + ++Y+KG+++ V++ +NLVDV
Sbjct: 12 EREAFAYAEKTGLDVVTICPSLVIGPLMQSTVNTSSNILINYLKGERDTVENKLRNLVDV 191
Query: 511 RDVAGALLLAYENLQASGRYLCSSPAIRVSDIVNILKTEYPTYTYPQKFVEAEGSNTYNT 332
RDVA ALLLAYE +ASGRY+CSS ++VSD++++LKT YPTYTYP+ FVE EG+ Y++
Sbjct: 192 RDVADALLLAYEKPEASGRYICSSVPVKVSDMISVLKTLYPTYTYPKNFVEVEGNTIYSS 371
Query: 331 EKLRKLGWTSRPMEDTLRDSIECYRAMGILN* 236
EKL+KLGW RP+E TL DS+E YRA G+LN*
Sbjct: 372 EKLQKLGWIFRPLEKTLGDSVESYRASGVLN* 467
Score = 161 bits (347), Expect = 4e-039
Identities = 81/154 (52%), Positives = 89/154 (57%)
Frame = +3 / -3
Query: 231 EAQFRMPIAL*HSMLSRRVSSMGLEVHPSFRSFSVLYVLLPSASTNF*G*VYVGYSVFSM 410
+AQFR P AL* S LS RV S GL++HPSF SFS L ++ PS ST F G*VYVGY VFS
Sbjct: 472 DAQFRTPDAL*DSTLSPRVFSKGLKIHPSF*SFSEL*IVFPSTSTKFLG*VYVGYKVFST 293
Query: 411 FTISETLIAGELQRYRPDACRFXXXXXXXXXXXXXXXXFLGXXXXXXXXXXXXXRKTLTL 590
ISET ELQ YRPDA F FL + L L
Sbjct: 292 LIISETFTGTELQMYRPDASGFSYANRRASATSRTSTRFLSLFSTVSRSPLR*LMRILLL 113
Query: 591 VFTAGCNKGPITNDGQIVTMSSPVLAA*AKASCS 692
VFT C KGPITNDG IVT S+PV +A*AKAS S
Sbjct: 112 VFTVDCIKGPITNDGHIVTTSNPVFSA*AKASRS 11
Score = 160 bits (343), Expect = 1e-038
Identities = 79/153 (51%), Positives = 99/153 (64%)
Frame = -1 / +2
Query: 692 RT*GFCLCSQNWARHCNYLPIIGNWTFVATCSKYKC*SLPQLYQRRSGDS*RWTQKSCGC 513
R *GFCLC +NW CNY+PI+GNW A SKY+ * L QRR+ + TQ+S GC
Sbjct: 11 RA*GFCLCRKNWVGCCNYMPIVGNWPLDAVYSKYEQ*YSH*LSQRRT*YCRK*TQESSGC 190
Query: 512 S*CRWCPSVGLRKSAGIRTIPLQFTSNKSL*YCKHTEDRISNIHLPSKIR*SGR*QHIQH 333
S*C C S+G+ K+ G+ T+ LQF+++KSL*Y K TED IS+IHL K+ S R ++
Sbjct: 191 S*CCRCSSIGI*KTRGVWTVHLQFSTSKSL*YDKRTEDLISDIHLSQKLCRSRRKYYL*L 370
Query: 332 GEASEARVDL*AHGGHPPRQHRMLQSYGHPELS 234
GE SEARVDL A P R +LQS PELS
Sbjct: 371 GETSEARVDLQAFREDPRR*RGILQSIWRPELS 469
Score = 144 bits (310), Expect = 5e-034
Identities = 82/153 (53%), Positives = 92/153 (60%)
Frame = +1 / -1
Query: 235 LSSGCP*LCSIRCCLGGCPPWA*RSTLASEASPCCMCCYLPLQRIFEGKCMLDIRSSVCL 414
LSSG LC I L G A*RSTLASE SP +L L + F KCM DIRSSV L
Sbjct: 468 LSSGRQMLCRIPRYLRGSSLKA*RSTLASEVSPSYK*YFLRLLQSFWDKCMSDIRSSVRL 289
Query: 415 QYQRLLLLVNCRGIVLMPADFRKPTEGHQRHHEHPQDFWVHL*LSPDLL*YN*GRL*HLY 594
YQRLLL++NCR V P F P E H++HHEHP D V+ LL* N* Y
Sbjct: 288 SYQRLLLVLNCRCTVQTPLVFHMPIEEHRQHHEHPLDS*VYFLQYHVLL*DN**EYYCSY 109
Query: 595 LLQVATKVQLPMMGK*LQCLAQFWLHKQKPHVL 693
LL A++ QLP MG *LQ QF+LHKQKPH L
Sbjct: 108 LL*TASRGQLPTMGI*LQHPTQFFLHKQKPHAL 10
Score = 127 bits (273), Expect = 6e-029
Identities = 60/117 (51%), Positives = 73/117 (62%)
Frame = +2 / -2
Query: 350 TFRFNEFLRVSVCWIFGLQYVYNIRDSYCW*TAEVSS*CLQIFVSQQKGTSDITNIHKIF 529
+F F + +SVC I GLQY Y+IRD Y +*TA+V S L F+ Q K +ITNIH I
Sbjct: 353 SFDFYKVFGISVCRI*GLQYAYHIRDFYWY*TADVPSRRLWFFICQ*KSIGNITNIH*IP 174
Query: 530 GSIFNYLLISFDITEEDFNTCIYCRLQQRSNYQ*WANSYNV*PSFGCISKSLMFCQC 700
IF + SF+I E+ IYCRL Q +NYQ WA SYN+ PSF CISKSL C
Sbjct: 173 EFIFYSITFSFEIINENITARIYCRLHQGANYQRWAYSYNIQPSFFCISKSLTLSSC 3
Score = 91.3 bits (193), Expect(2) = 1e-029
Identities = 54/102 (52%), Positives = 60/102 (58%)
Frame = -3 / +1
Query: 540 KMDPKILWMFVMSLVPFCWLTKICRHQDDTSAVHQQ*ESLIL*TY*RPNIQHTLTLKNSL 361
K++ I WMFVM + F W K R D TSAV Q*+SLI * Y*RP I+HTL K
Sbjct: 163 KINSGI*WMFVMLPMLFYWHMKNQRRLDGTSAVQYQ*KSLI**AY*RPYIRHTLIPKTL* 342
Query: 360 KRKVATHTTRRSFGS*GGPLGPWRTPSETASNATELWAS*TE 235
K K RR+F S*GG G R PSE A N TE AS*TE
Sbjct: 343 KSKEILFIARRNFRS*GGSSGL*RRPSEIAWNPTEHLAS*TE 468
Score = 58.8 bits (122), Expect(2) = 1e-029
Identities = 28/49 (57%), Positives = 37/49 (75%)
Frame = -3 / +1
Query: 702 KHWQNMRLLLMQPKLG*TL*LFAHHW*LDLCCNLQ*IQVLKSSSVISKE 556
+H +++RLLLMQ KLG L*L+AH W*L C+LQ*I+ + S +ISKE
Sbjct: 1 RHEESVRLLLMQKKLGWML*LYAHRW*LAP*CSLQ*IRAVIFSLIISKE 147
>gb|CB879567.1|CB879567 HP02M04w HP Hordeum vulgare subsp. vulgare cDNA clone HP02M04
3-PRIME, mRNA sequence
Length = 665
Score = 245 bits (530), Expect = 2e-064
Identities = 98/152 (64%), Positives = 126/152 (82%)
Frame = -2 / -3
Query: 691 EHEAFAYAAKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIKGDQEIVKDGPKNLVDV 512
E EAFAYA KTGLD+VTICPSLVIGPL+Q VNTS + ++Y+KG+++ V++ +NLVDV
Sbjct: 654 EREAFAYAEKTGLDVVTICPSLVIGPLMQSTVNTSSNILINYLKGERDTVENKLRNLVDV 475
Query: 511 RDVAGALLLAYENLQASGRYLCSSPAIRVSDIVNILKTEYPTYTYPQKFVEAEGSNTYNT 332
RDVA ALLLAYE +ASGRY+CSS ++VSD++++LKT YPTYTYP+ FVE EG+ Y++
Sbjct: 474 RDVADALLLAYEKPEASGRYICSSVPVKVSDMISVLKTLYPTYTYPKNFVEVEGNTIYSS 295
Query: 331 EKLRKLGWTSRPMEDTLRDSIECYRAMGILN* 236
EKL+KLGW RP+E TL DS+E YRA G+LN*
Sbjct: 294 EKLQKLGWIFRPLEKTLGDSVESYRASGVLN* 199
Score = 161 bits (347), Expect = 4e-039
Identities = 81/154 (52%), Positives = 89/154 (57%)
Frame = +3 / +2
Query: 231 EAQFRMPIAL*HSMLSRRVSSMGLEVHPSFRSFSVLYVLLPSASTNF*G*VYVGYSVFSM 410
+AQFR P AL* S LS RV S GL++HPSF SFS L ++ PS ST F G*VYVGY VFS
Sbjct: 194 DAQFRTPDAL*DSTLSPRVFSKGLKIHPSF*SFSEL*IVFPSTSTKFLG*VYVGYKVFST 373
Query: 411 FTISETLIAGELQRYRPDACRFXXXXXXXXXXXXXXXXFLGXXXXXXXXXXXXXRKTLTL 590
ISET ELQ YRPDA F FL + L L
Sbjct: 374 LIISETFTGTELQMYRPDASGFSYANRRASATSRTSTRFLSLFSTVSRSPLR*LMRILLL 553
Query: 591 VFTAGCNKGPITNDGQIVTMSSPVLAA*AKASCS 692
VFT C KGPITNDG IVT S+PV +A*AKAS S
Sbjct: 554 VFTVDCIKGPITNDGHIVTTSNPVFSA*AKASRS 655
Score = 160 bits (343), Expect = 1e-038
Identities = 79/153 (51%), Positives = 99/153 (64%)
Frame = -1 / -2
Query: 692 RT*GFCLCSQNWARHCNYLPIIGNWTFVATCSKYKC*SLPQLYQRRSGDS*RWTQKSCGC 513
R *GFCLC +NW CNY+PI+GNW A SKY+ * L QRR+ + TQ+S GC
Sbjct: 655 RA*GFCLCRKNWVGCCNYMPIVGNWPLDAVYSKYEQ*YSH*LSQRRT*YCRK*TQESSGC 476
Query: 512 S*CRWCPSVGLRKSAGIRTIPLQFTSNKSL*YCKHTEDRISNIHLPSKIR*SGR*QHIQH 333
S*C C S+G+ K+ G+ T+ LQF+++KSL*Y K TED IS+IHL K+ S R ++
Sbjct: 475 S*CCRCSSIGI*KTRGVWTVHLQFSTSKSL*YDKRTEDLISDIHLSQKLCRSRRKYYL*L 296
Query: 332 GEASEARVDL*AHGGHPPRQHRMLQSYGHPELS 234
GE SEARVDL A P R +LQS PELS
Sbjct: 295 GETSEARVDLQAFREDPRR*RGILQSIWRPELS 197
Score = 144 bits (310), Expect = 5e-034
Identities = 82/153 (53%), Positives = 92/153 (60%)
Frame = +1 / +3
Query: 235 LSSGCP*LCSIRCCLGGCPPWA*RSTLASEASPCCMCCYLPLQRIFEGKCMLDIRSSVCL 414
LSSG LC I L G A*RSTLASE SP +L L + F KCM DIRSSV L
Sbjct: 198 LSSGRQMLCRIPRYLRGSSLKA*RSTLASEVSPSYK*YFLRLLQSFWDKCMSDIRSSVRL 377
Query: 415 QYQRLLLLVNCRGIVLMPADFRKPTEGHQRHHEHPQDFWVHL*LSPDLL*YN*GRL*HLY 594
YQRLLL++NCR V P F P E H++HHEHP D V+ LL* N* Y
Sbjct: 378 SYQRLLLVLNCRCTVQTPLVFHMPIEEHRQHHEHPLDS*VYFLQYHVLL*DN**EYYCSY 557
Query: 595 LLQVATKVQLPMMGK*LQCLAQFWLHKQKPHVL 693
LL A++ QLP MG *LQ QF+LHKQKPH L
Sbjct: 558 LL*TASRGQLPTMGI*LQHPTQFFLHKQKPHAL 656
Score = 127 bits (273), Expect = 6e-029
Identities = 60/117 (51%), Positives = 73/117 (62%)
Frame = +2 / +1
Query: 350 TFRFNEFLRVSVCWIFGLQYVYNIRDSYCW*TAEVSS*CLQIFVSQQKGTSDITNIHKIF 529
+F F + +SVC I GLQY Y+IRD Y +*TA+V S L F+ Q K +ITNIH I
Sbjct: 313 SFDFYKVFGISVCRI*GLQYAYHIRDFYWY*TADVPSRRLWFFICQ*KSIGNITNIH*IP 492
Query: 530 GSIFNYLLISFDITEEDFNTCIYCRLQQRSNYQ*WANSYNV*PSFGCISKSLMFCQC 700
IF + SF+I E+ IYCRL Q +NYQ WA SYN+ PSF CISKSL C
Sbjct: 493 EFIFYSITFSFEIINENITARIYCRLHQGANYQRWAYSYNIQPSFFCISKSLTLSSC 663
Score = 91.3 bits (193), Expect(2) = 1e-029
Identities = 54/102 (52%), Positives = 60/102 (58%)
Frame = -3 / -1
Query: 540 KMDPKILWMFVMSLVPFCWLTKICRHQDDTSAVHQQ*ESLIL*TY*RPNIQHTLTLKNSL 361
K++ I WMFVM + F W K R D TSAV Q*+SLI * Y*RP I+HTL K
Sbjct: 503 KINSGI*WMFVMLPMLFYWHMKNQRRLDGTSAVQYQ*KSLI**AY*RPYIRHTLIPKTL* 324
Query: 360 KRKVATHTTRRSFGS*GGPLGPWRTPSETASNATELWAS*TE 235
K K RR+F S*GG G R PSE A N TE AS*TE
Sbjct: 323 KSKEILFIARRNFRS*GGSSGL*RRPSEIAWNPTEHLAS*TE 198
Score = 58.8 bits (122), Expect(2) = 1e-029
Identities = 28/49 (57%), Positives = 37/49 (75%)
Frame = -3 / -1
Query: 702 KHWQNMRLLLMQPKLG*TL*LFAHHW*LDLCCNLQ*IQVLKSSSVISKE 556
+H +++RLLLMQ KLG L*L+AH W*L C+LQ*I+ + S +ISKE
Sbjct: 665 RHEESVRLLLMQKKLGWML*LYAHRW*LAP*CSLQ*IRAVIFSLIISKE 519
>gb|BJ464456.1|BJ464456 BJ464456 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags34g17 5', mRNA sequence
Length = 647
Score = 244 bits (527), Expect = 5e-064
Identities = 100/153 (65%), Positives = 118/153 (77%)
Frame = -2 / +2
Query: 862 KACYEAKAKRXXXXXXXXXVFNNPDWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHE 683
KAC EAK KR VFNNP+WPKG+ FTEDSWSD + CRK E+WY LSKT AE E
Sbjct: 188 KACNEAKVKRVVIVSSCAAVFNNPNWPKGKVFTEDSWSDEDLCRKGEDWYLLSKTRAERE 367
Query: 682 AFAYAAKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIKGDQEIVKDGPKNLVDVRDV 503
AFAYAAKTG+D+V I PSLV+GPL+QP VN S K+ L Y+KG+ E V++ NLVDVRDV
Sbjct: 368 AFAYAAKTGMDVVAILPSLVLGPLMQPTVNASSKILLKYLKGEHETVENRFWNLVDVRDV 547
Query: 502 AGALLLAYENLQASGRYLCSSPAIRVSDIVNIL 404
A ALLLAYEN +ASGRY+CS I+VSD++NIL
Sbjct: 548 ADALLLAYENPEASGRYICSPVRIKVSDVINIL 646
Score = 142 bits (305), Expect = 2e-033
Identities = 75/153 (49%), Positives = 95/153 (62%)
Frame = -1 / +1
Query: 863 ESLL*GQSEESCCGIFSGGCVQ*S*LA*GRGLY*G*LVRWGILQKK*GMVFPF*NIGRT* 684
E L G+S SC +F CVQ S*LA G+ +Y* LVR G +QK *G+VF F N R *
Sbjct: 187 EGLQRGKS*ASCHSVFMCCCVQQS*LAQGQSIY*RQLVRRGSVQKG*GLVFAFQNARRA* 366
Query: 683 GFCLCSQNWARHCNYLPIIGNWTFVATCSKYKC*SLPQLYQRRSGDS*RWTQKSCGCS*C 504
GFCLCS+NW C+Y IIG W A S+ + *+ PQ+ QRR+ D + +S GC *C
Sbjct: 367 GFCLCSENWDGCCSYSTIIGTWPLDAANSECEQ*NSPQISQRRT*DCRK*ILESSGCP*C 546
Query: 503 RWCPSVGLRKSAGIRTIPLQFTSNKSL*YCKHT 405
C S G+ KS GI T+ LQ ++NKS * KH+
Sbjct: 547 CRCSSSGI*KSRGIWTVHLQSSTNKSF*CHKHS 645
Score = 139 bits (298), Expect = 2e-032
Identities = 80/153 (52%), Positives = 97/153 (63%)
Frame = -3 / +3
Query: 861 KLAMRPKRRELLWYLQWRLCSIILTGLRARPLLRIAGQMGNIAEKMRNGISFLKHWQNMR 682
+LA R K EL L LCS ILTG RA+ LL+ AGQ AE++R GI F K Q++R
Sbjct: 189 RLATRQKLSELS*CLHVLLCSTILTGPRAKYLLKTAGQTRICAERVRIGICFPKRAQSVR 368
Query: 681 LLLMQPKLG*TL*LFAHHW*LDLCCNLQ*IQVLKSSSVISKEIRR*LKMDPKILWMFVMS 502
LLLMQ KLG L*LF HHW L C+ Q*++ +K SS ISKE R K+D I WM VM
Sbjct: 369 LLLMQRKLGWML*LFYHHWYLAP*CSQQ*MRAVKFSSNISKENMRL*KIDSGI*WMSVML 548
Query: 501 LVPFCWLTKICRHQDDTSAVHQQ*ESLIL*TY* 403
+ F W KI RH D TSAV +*+ L+ *T+*
Sbjct: 549 PMLFFWHMKIQRHLDGTSAVQYE*KFLMS*TF* 647
Score = 131 bits (281), Expect = 5e-030
Identities = 73/152 (48%), Positives = 90/152 (59%)
Frame = +1 / -1
Query: 403 SVCLQYQRLLLLVNCRGIVLMPADFRKPTEGHQRHHEHPQDFWVHL*LSPDLL*YN*GRL 582
S CL +Q+LL +++CR V MP DF P E H++HH HP D ++ S LL* *G
Sbjct: 647 SECL*HQKLLFVLDCRCTVQMPLDFHMPEEEHRQHHGHPLDSRIYFLQSHVLL*DI*GEF 468
Query: 583 *HLYLLQVATKVQLPMMGK*LQCLAQFWLHKQKPHVLPMF*KGNTIPHFFCNIPHLTSYP 762
+ L A++ Q+PMM +*LQ +QF LHKQKPH L F K NT PH FC P LTS
Sbjct: 467 YCSHSLLAASRGQVPMMVE*LQHPSQFSLHKQKPHALRAFWKANTNPHPFCTDPRLTSCL 288
Query: 763 Q*RPRP*ASQDY*TQPPLKIPQQLSSLWPHSK 858
Q* P AS D *TQ +K QL+ L P K
Sbjct: 287 Q*ILCPWAS*DC*TQQHMKTL*QLA*LLPRCK 192
Score = 129 bits (276), Expect = 2e-029
Identities = 69/152 (45%), Positives = 71/152 (46%)
Frame = +3 / -3
Query: 408 MFTISETLIAGELQRYRPDACRFXXXXXXXXXXXXXXXXFLGXXXXXXXXXXXXXRKTLT 587
MF SET I LQ YRPDA F F R+ L
Sbjct: 642 MFMTSETFIRTGLQMYRPDASGFSYARRRASATSRTSTRFQNLFSTVSCSPLRYLRRILL 463
Query: 588 LVFTAGCNKGPITNDGQIVTMSSPVLAA*AKASCSANVLERKYHSSFFLQYSPSDQLSSV 767
L FT GC KGP TNDG+I T S PV AA*AKAS SA VLE KY SS FL S SDQLSSV
Sbjct: 462 LAFTVGCIKGPSTNDGRIATTSIPVFAA*AKASRSARVLESKYQSSPFLHRSSSDQLSSV 283
Query: 768 KASPLGQSGXXXXXXXXXXXXXXXXXXS*QAF 863
PLGQ G S QAF
Sbjct: 282 NTLPLGQLGLLNTAAHEDTMTTRLTFASLQAF 187
Score = 120 bits (257), Expect(2) = 9e-034
Identities = 55/103 (53%), Positives = 70/103 (67%)
Frame = +2 / -2
Query: 404 QYVYNIRDSYCW*TAEVSS*CLQIFVSQQKGTSDITNIHKIFGSIFNYLLISFDITEEDF 583
Q VY+IR+ Y + TA+V S CL IF+ Q+K +IT+IH I SIF L+ SF+I EE+F
Sbjct: 646 QNVYDIRNFYSYWTADVPSRCLWIFICQKKSIGNITDIH*IPESIFYSLMFSFEIFEENF 467
Query: 584 NTCIYCRLQQRSNYQ*WANSYNV*PSFGCISKSLMFCQCFRKE 712
I+C L Q + YQ*W NSYN+ PSF CISKSL C F K+
Sbjct: 466 TARIHCWLHQGAKYQ*W*NSYNIHPSFRCISKSLTLCARFGKQ 338
Score = 43.2 bits (88), Expect(2) = 9e-034
Identities = 19/31 (61%), Positives = 24/31 (77%)
Frame = +2 / -2
Query: 767 KGLALRPVRIIEHSRH*RYHNNSLRFGLIAS 859
K AL PVRI+EHS *R+++NSL F L+AS
Sbjct: 283 KYFALGPVRIVEHSST*RHYDNSLNFCLVAS 191
>gb|BE195648.3|BE195648 HVSMEh0090A21f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0090A21f, mRNA sequence
Length = 919
Score = 205 bits (442), Expect = 3e-052
Identities = 82/207 (39%), Positives = 126/207 (60%)
Frame = -2 / +2
Query: 862 KACYEAKAKRXXXXXXXXXVFNNPDWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHE 683
KAC K ++ V NP+WP+ + E WSD ++C+KNE+WY ++K +AE
Sbjct: 98 KACSAMKVQKVIVLSSTAAVDFNPNWPQDKLKDESCWSDKDFCQKNEDWYSVAKIVAEQA 277
Query: 682 AFAYAAKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIKGDQEIVKDGPKNLVDVRDV 503
+F Y+ K GL++VT+CP LV GPLLQP VNTS K + G +++ + ++VDVRDV
Sbjct: 278 SFEYSEKNGLNVVTVCPPLVFGPLLQPTVNTSSKFLIYVTNGGPDVMSNKLWHIVDVRDV 457
Query: 502 AGALLLAYENLQASGRYLCSSPAIRVSDIVNILKTEYPTYTYPQKFVEAEGSNTYNTEKL 323
A ALLL YE ++ GRY+C+ I +D+V++LK +P Y+Y V+ + +++KL
Sbjct: 458 ADALLLVYEKAESYGRYICTPNNICTTDLVDLLKKMHPQYSYVNNIVDVDRKAPISSQKL 637
Query: 322 RKLGWTSRPMEDTLRDSIECYRAMGIL 242
+ LGW +TL DS++ Y +L
Sbjct: 638 KDLGWKPPKAGETLSDSVDWYEKAXLL 718
>gb|BG367870.1|BG367870 HVSMEi0014B22f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0014B22f, mRNA sequence
Length = 867
Score = 192 bits (413), Expect = 3e-048
Identities = 74/174 (42%), Positives = 114/174 (65%)
Frame = -2 / +1
Query: 763 EDSWSDGEYCRKNEEWYFLSKTLAEHEAFAYAAKTGLDIVTICPSLVIGPLLQPAVNTSV 584
E WSD ++C+KNE+WY ++K +AE +F Y+ K GL++VT+CP LV GPLLQP VNTS
Sbjct: 1 ESCWSDKDFCQKNEDWYSVAKIVAEQASFEYSEKNGLNVVTVCPPLVFGPLLQPTVNTSS 180
Query: 583 KVFLSYIKGDQEIVKDGPKNLVDVRDVAGALLLAYENLQASGRYLCSSPAIRVSDIVNIL 404
K + G +++ + ++VDVRDVA ALLL YE ++ GRY+C+ I +D+V++L
Sbjct: 181 KFLIYVTNGGPDVMSNKLWHIVDVRDVADALLLVYEKAESYGRYICTPNNICTTDLVDLL 360
Query: 403 KTEYPTYTYPQKFVEAEGSNTYNTEKLRKLGWTSRPMEDTLRDSIECYRAMGIL 242
K +P Y+Y V+ + +++KL+ LGW R +E+T D ++C+ G L
Sbjct: 361 KKMHPQYSYVNNIVDVDRKAPISSQKLKDLGWKPRKLEETPLDIVDCFDKAGPL 522
>gb|BU988879.1|BU988879 HF18P19r HF Hordeum vulgare subsp. vulgare cDNA clone HF18P19
5-PRIME, mRNA sequence
Length = 529
Score = 188 bits (406), Expect = 3e-047
Identities = 71/163 (43%), Positives = 109/163 (66%)
Frame = -2 / +2
Query: 796 NPDWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHEAFAYAAKTGLDIVTICPSLVIG 617
NP+WP+ + E WSD ++C+KNE+WY ++K +AE +F Y+ K GL++VT+CP LV G
Sbjct: 41 NPNWPQDKLKDESCWSDKDFCQKNEDWYSVAKIVAEQASFEYSEKNGLNVVTVCPPLVFG 220
Query: 616 PLLQPAVNTSVKVFLSYIKGDQEIVKDGPKNLVDVRDVAGALLLAYENLQASGRYLCSSP 437
PLLQP VNTS K + G +++ + ++VDVRDVA ALLL YE ++ GRY+C+
Sbjct: 221 PLLQPTVNTSSKFLIYVTNGGPDVMSNKLWHIVDVRDVADALLLVYEKAESYGRYICTPN 400
Query: 436 AIRVSDIVNILKTEYPTYTYPQKFVEAEGSNTYNTEKLRKLGW 308
I +D+V++LK +P Y+Y V+ + +++KL+ LGW
Sbjct: 401 NICTTDLVDLLKKMHPQYSYVNNIVDVDRKAPISSQKLKDLGW 529
>gb|CA010479.1|CA010479 HT09N23u HT Hordeum vulgare subsp. vulgare cDNA clone HT09N23
3-PRIME, mRNA sequence
Length = 505
Score = 185 bits (399), Expect = 2e-046
Identities = 73/121 (60%), Positives = 99/121 (81%)
Frame = -2 / -1
Query: 598 VNTSVKVFLSYIKGDQEIVKDGPKNLVDVRDVAGALLLAYENLQASGRYLCSSPAIRVSD 419
VNTS + ++Y+KG+++ V++ +NLVDVRDVA ALLLAYE +ASGRY+CSS ++VSD
Sbjct: 505 VNTSSNILINYLKGERDTVENKLRNLVDVRDVADALLLAYEKPEASGRYICSSVPVKVSD 326
Query: 418 IVNILKTEYPTYTYPQKFVEAEGSNTYNTEKLRKLGWTSRPMEDTLRDSIECYRAMGILN 239
++++LKT YPTYTYP+ FVE EG+ Y++EKL+KLGW RP+E TL DS+E YRA G+LN
Sbjct: 325 MISVLKTLYPTYTYPKNFVEVEGNTIYSSEKLQKLGWIFRPLEKTLGDSVESYRASGVLN 146
Query: 238 * 236
*
Sbjct: 145 * 143
Score = 112 bits (240), Expect = 2e-024
Identities = 58/122 (47%), Positives = 64/122 (52%)
Frame = +3 / +3
Query: 231 EAQFRMPIAL*HSMLSRRVSSMGLEVHPSFRSFSVLYVLLPSASTNF*G*VYVGYSVFSM 410
+AQFR P AL* S LS RV S GL++HPSF SFS L ++ PS ST F G*VYVGY VFS
Sbjct: 138 DAQFRTPDAL*DSTLSPRVFSKGLKIHPSF*SFSEL*IVFPSTSTKFLG*VYVGYKVFST 317
Query: 411 FTISETLIAGELQRYRPDACRFXXXXXXXXXXXXXXXXFLGXXXXXXXXXXXXXRKTLTL 590
ISET ELQ YRPDA F FL + L L
Sbjct: 318 LIISETFTGTELQMYRPDASGFSYANRRASATSRTSTRFLSLFSTVSRSPLR*LMRILLL 497
Query: 591 VF 596
VF
Sbjct: 498 VF 503
Score = 107 bits (228), Expect = 9e-023
Identities = 60/121 (49%), Positives = 77/121 (63%)
Frame = -1 / -3
Query: 596 KYKC*SLPQLYQRRSGDS*RWTQKSCGCS*CRWCPSVGLRKSAGIRTIPLQFTSNKSL*Y 417
KY+ * L QRR+ + TQ+S GCS*C C S+G+ K+ G+ T+ LQF+++KSL*Y
Sbjct: 503 KYEQ*YSH*LSQRRT*YCRK*TQESSGCS*CCRCSSIGI*KTRGVWTVHLQFSTSKSL*Y 324
Query: 416 CKHTEDRISNIHLPSKIR*SGR*QHIQHGEASEARVDL*AHGGHPPRQHRMLQSYGHPEL 237
K TED IS+IHL K+ S R ++ GE SEARVDL A P R +LQS PEL
Sbjct: 323 DKRTEDLISDIHLSQKLCRSRRKYYL*LGETSEARVDLQAFREDPRR*RGILQSIWRPEL 144
Query: 236 S 234
S
Sbjct: 143 S 141
Score = 105 bits (224), Expect = 3e-022
Identities = 54/97 (55%), Positives = 60/97 (61%)
Frame = +1 / +1
Query: 235 LSSGCP*LCSIRCCLGGCPPWA*RSTLASEASPCCMCCYLPLQRIFEGKCMLDIRSSVCL 414
LSSG LC I L G A*RSTLASE SP +L L + F KCM DIRSSV L
Sbjct: 142 LSSGRQMLCRIPRYLRGSSLKA*RSTLASEVSPSYK*YFLRLLQSFWDKCMSDIRSSVRL 321
Query: 415 QYQRLLLLVNCRGIVLMPADFRKPTEGHQRHHEHPQD 525
YQRLLL++NCR V P F P E H++HHEHP D
Sbjct: 322 SYQRLLLVLNCRCTVQTPLVFHMPIEEHRQHHEHPLD 432
>gb|BU989165.1|BU989165 HF19P19r HF Hordeum vulgare subsp. vulgare cDNA clone HF19P19
5-PRIME, mRNA sequence
Length = 518
Score = 179 bits (386), Expect = 2e-044
Identities = 68/159 (42%), Positives = 106/159 (66%)
Frame = -2 / +2
Query: 796 NPDWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHEAFAYAAKTGLDIVTICPSLVIG 617
NP+WP+ + E WSD ++C+KNE+WY ++K +AE +F Y+ K GL++VT+CP LV G
Sbjct: 41 NPNWPQDKLKDESCWSDKDFCQKNEDWYSVAKIVAEQASFEYSEKNGLNVVTVCPPLVFG 220
Query: 616 PLLQPAVNTSVKVFLSYIKGDQEIVKDGPKNLVDVRDVAGALLLAYENLQASGRYLCSSP 437
PLLQP VNTS K + G +++ + ++VDVRDVA ALLL YE ++ GRY+C+
Sbjct: 221 PLLQPTVNTSSKFLIYVTNGGPDVMSNKLWHIVDVRDVADALLLVYEKAESYGRYICTPN 400
Query: 436 AIRVSDIVNILKTEYPTYTYPQKFVEAEGSNTYNTEKLR 320
I +D+V++LK +P Y+Y V+ + +++KL+
Sbjct: 401 NICTTDLVDLLKKMHPQYSYVNNIVDVDRKAPISSQKLK 517
>gb|BJ457744.1|BJ457744 BJ457744 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak29b22 3', mRNA sequence
Length = 633
Score = 144 bits (308), Expect(2) = 6e-042
Identities = 57/127 (44%), Positives = 85/127 (66%)
Frame = -2 / -3
Query: 763 EDSWSDGEYCRKNEEWYFLSKTLAEHEAFAYAAKTGLDIVTICPSLVIGPLLQPAVNTSV 584
E WSD E+CR N+ WY ++K AE A Y +TGL +VT+ P+LV GPLLQP +NTS
Sbjct: 628 ESCWSDKEFCRSNQSWYPVAKIAAEAAALEYGRETGLGVVTLNPALVFGPLLQPTINTSS 449
Query: 583 KVFLSYIKGDQEIVKDGPKNLVDVRDVAGALLLAYENLQASGRYLCSSPAIRVSDIVNIL 404
+ + +++G + +D ++VDVRDVA ALLL YE +A+GR++C+ I +++ +L
Sbjct: 448 QFLIYFLRGGPDETRDKLWHIVDVRDVADALLLLYEAPEATGRHICAPHFITARELLGLL 269
Query: 403 KTEYPTY 383
K+ YP Y
Sbjct: 268 KSMYPGY 248
Score = 47.3 bits (97), Expect(2) = 6e-042
Identities = 16/29 (55%), Positives = 22/29 (75%)
Frame = -2 / -3
Query: 328 KLRKLGWTSRPMEDTLRDSIECYRAMGIL 242
KL KLGW+SRP+ +T+ D++EC R G L
Sbjct: 187 KLEKLGWSSRPLRETITDTVECCREAGFL 101
>gb|BE559021.2|BE559021 HV_CEb0022F12f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0022F12f, mRNA sequence
Length = 697
Score = 168 bits (362), Expect = 3e-041
Identities = 66/101 (65%), Positives = 76/101 (75%)
Frame = -2 / +1
Query: 862 KACYEAKAKRXXXXXXXXXVFNNPDWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHE 683
KAC EAK KR VFNNP+WPKG+ FTEDSWSD + CRK E+WY LSKT AE E
Sbjct: 394 KACNEAKVKRVVIVSSCAAVFNNPNWPKGKVFTEDSWSDEDLCRKGEDWYLLSKTRAERE 573
Query: 682 AFAYAAKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIK 560
AFAYAAKTG+D+V I PSLV+GPL+QP VN S K+ L Y+K
Sbjct: 574 AFAYAAKTGMDVVAILPSLVLGPLMQPTVNASSKILLKYLK 696
Score = 106 bits (227), Expect = 1e-022
Identities = 54/97 (55%), Positives = 56/97 (57%)
Frame = +3 / -3
Query: 573 RKTLTLVFTAGCNKGPITNDGQIVTMSSPVLAA*AKASCSANVLERKYHSSFFLQYSPSD 752
R+ L L FT GC KGP TNDG+I T S PV AA*AKAS SA VLE KY SS FL S SD
Sbjct: 683 RRILLLAFTVGCIKGPSTNDGRIATTSIPVFAA*AKASRSARVLESKYQSSPFLHRSSSD 504
Query: 753 QLSSVKASPLGQSGXXXXXXXXXXXXXXXXXXS*QAF 863
QLSSV PLGQ G S QAF
Sbjct: 503 QLSSVNTLPLGQLGLLNTAAHEDTMTTRLTFASLQAF 393
>gb|BJ463463.1|BJ463463 BJ463463 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags32a03 5', mRNA sequence
Length = 662
Score = 162 bits (348), Expect = 3e-039
Identities = 64/97 (65%), Positives = 73/97 (75%)
Frame = -2 / +1
Query: 862 KACYEAKAKRXXXXXXXXXVFNNPDWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHE 683
KAC EAK KR VFNNP+WPKG+ FTEDSWSD + CRK E+WY LSKT AE E
Sbjct: 367 KACNEAKVKRVVIVSSCAAVFNNPNWPKGKVFTEDSWSDEDLCRKGEDWYLLSKTRAERE 546
Query: 682 AFAYAAKTGLDIVTICPSLVIGPLLQPAVNTSVKVFL 572
AFAYAAKTG+D+V I PSLV+GPL+QP VN S K+ L
Sbjct: 547 AFAYAAKTGMDVVAILPSLVLGPLMQPTVNASSKILL 657
Score = 106 bits (227), Expect = 1e-022
Identities = 54/97 (55%), Positives = 56/97 (57%)
Frame = +3 / -1
Query: 573 RKTLTLVFTAGCNKGPITNDGQIVTMSSPVLAA*AKASCSANVLERKYHSSFFLQYSPSD 752
R+ L L FT GC KGP TNDG+I T S PV AA*AKAS SA VLE KY SS FL S SD
Sbjct: 656 RRILLLAFTVGCIKGPSTNDGRIATTSIPVFAA*AKASRSARVLESKYQSSPFLHRSSSD 477
Query: 753 QLSSVKASPLGQSGXXXXXXXXXXXXXXXXXXS*QAF 863
QLSSV PLGQ G S QAF
Sbjct: 476 QLSSVNTLPLGQLGLLNTAAHEDTMTTRLTFASLQAF 366
>gb|AL506722.1|AL506722 AL506722 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY04A23T 5',
mRNA sequence
Length = 619
Score = 160 bits (344), Expect = 9e-039
Identities = 63/95 (66%), Positives = 72/95 (75%)
Frame = -2 / +2
Query: 862 KACYEAKAKRXXXXXXXXXVFNNPDWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHE 683
KAC EAK KR VFNNP+WPKG+ FTEDSWSD + CRK E+WY LSKT AE E
Sbjct: 332 KACNEAKVKRVVIVSSCAAVFNNPNWPKGKVFTEDSWSDEDLCRKGEDWYLLSKTRAERE 511
Query: 682 AFAYAAKTGLDIVTICPSLVIGPLLQPAVNTSVKV 578
AFAYAAKTG+D+V I PSLV+GPL+QP VN S K+
Sbjct: 512 AFAYAAKTGMDVVAILPSLVLGPLMQPTVNASSKI 616
Score = 104 bits (222), Expect = 6e-022
Identities = 53/96 (55%), Positives = 55/96 (57%)
Frame = +3 / -2
Query: 576 KTLTLVFTAGCNKGPITNDGQIVTMSSPVLAA*AKASCSANVLERKYHSSFFLQYSPSDQ 755
+ L L FT GC KGP TNDG+I T S PV AA*AKAS SA VLE KY SS FL S SDQ
Sbjct: 618 RILLLAFTVGCIKGPSTNDGRIATTSIPVFAA*AKASRSARVLESKYQSSPFLHRSSSDQ 439
Query: 756 LSSVKASPLGQSGXXXXXXXXXXXXXXXXXXS*QAF 863
LSSV PLGQ G S QAF
Sbjct: 438 LSSVNTLPLGQLGLLNTAAHEDTMTTRLTFASLQAF 331
>gb|CB876594.1|CB876594 HX11M09w HX Hordeum vulgare subsp. vulgare cDNA clone HX11M09
3-PRIME, mRNA sequence
Length = 565
Score = 160 bits (343), Expect = 1e-038
Identities = 64/96 (66%), Positives = 80/96 (83%)
Frame = -2 / -1
Query: 523 LVDVRDVAGALLLAYENLQASGRYLCSSPAIRVSDIVNILKTEYPTYTYPQKFVEAEGSN 344
LVDVRDVA ALLLAYE +ASGRY+CSS ++VSD++++LKT YPTYTYP+ FVE EG+
Sbjct: 565 LVDVRDVADALLLAYEKPEASGRYICSSVPVKVSDMISVLKTLYPTYTYPKNFVEVEGNT 386
Query: 343 TYNTEKLRKLGWTSRPMEDTLRDSIECYRAMGILN* 236
Y++EKL+KLGW RP+E TL DS+E YRA G+LN*
Sbjct: 385 IYSSEKLQKLGWIFRPLEKTLGDSVESYRASGVLN* 278
Score = 109 bits (232), Expect = 3e-023
Identities = 52/82 (63%), Positives = 57/82 (69%)
Frame = +3 / +3
Query: 231 EAQFRMPIAL*HSMLSRRVSSMGLEVHPSFRSFSVLYVLLPSASTNF*G*VYVGYSVFSM 410
+AQFR P AL* S LS RV S GL++HPSF SFS L ++ PS ST F G*VYVGY VFS
Sbjct: 273 DAQFRTPDAL*DSTLSPRVFSKGLKIHPSF*SFSEL*IVFPSTSTKFLG*VYVGYKVFST 452
Query: 411 FTISETLIAGELQRYRPDACRF 476
ISET ELQ YRPDA F
Sbjct: 453 LIISETFTGTELQMYRPDASGF 518
Score = 103 bits (220), Expect = 1e-021
Identities = 53/95 (55%), Positives = 59/95 (62%)
Frame = +1 / +1
Query: 235 LSSGCP*LCSIRCCLGGCPPWA*RSTLASEASPCCMCCYLPLQRIFEGKCMLDIRSSVCL 414
LSSG LC I L G A*RSTLASE SP +L L + F KCM DIRSSV L
Sbjct: 277 LSSGRQMLCRIPRYLRGSSLKA*RSTLASEVSPSYK*YFLRLLQSFWDKCMSDIRSSVRL 456
Query: 415 QYQRLLLLVNCRGIVLMPADFRKPTEGHQRHHEHP 519
YQRLLL++NCR V P F P E H++HHEHP
Sbjct: 457 SYQRLLLVLNCRCTVQTPLVFHMPIEEHRQHHEHP 561
>gb|BJ464137.1|BJ464137 BJ464137 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags33a09 5', mRNA sequence
Length = 663
Score = 157 bits (338), Expect = 6e-038
Identities = 62/92 (67%), Positives = 70/92 (76%)
Frame = -2 / +1
Query: 862 KACYEAKAKRXXXXXXXXXVFNNPDWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHE 683
KAC EAK KR VFNNP+WPKG+ FTEDSWSD + CRK E+WY LSKT AE E
Sbjct: 385 KACNEAKVKRVVIVSSCAAVFNNPNWPKGKVFTEDSWSDEDLCRKGEDWYLLSKTRAERE 564
Query: 682 AFAYAAKTGLDIVTICPSLVIGPLLQPAVNTS 587
AFAYAAKTG+D+V I PSLV+GPL+QP VN S
Sbjct: 565 AFAYAAKTGMDVVAILPSLVLGPLMQPTVNAS 660
Score = 102 bits (218), Expect = 2e-021
Identities = 52/92 (56%), Positives = 53/92 (57%)
Frame = +3 / -2
Query: 588 LVFTAGCNKGPITNDGQIVTMSSPVLAA*AKASCSANVLERKYHSSFFLQYSPSDQLSSV 767
L FT GC KGP TNDG+I T S PV AA*AKAS SA VLE KY SS FL S SDQLSSV
Sbjct: 659 LAFTVGCIKGPSTNDGRIATTSIPVFAA*AKASRSARVLESKYQSSPFLHRSSSDQLSSV 480
Query: 768 KASPLGQSGXXXXXXXXXXXXXXXXXXS*QAF 863
PLGQ G S QAF
Sbjct: 479 NTLPLGQLGLLNTAAHEDTMTTRLTFASLQAF 384
>gb|CB876200.1|CB876200 HX10J08w HX Hordeum vulgare subsp. vulgare cDNA clone HX10J08
3-PRIME, mRNA sequence
Length = 562
Score = 157 bits (338), Expect = 6e-038
Identities = 63/95 (66%), Positives = 79/95 (83%)
Frame = -2 / -1
Query: 520 VDVRDVAGALLLAYENLQASGRYLCSSPAIRVSDIVNILKTEYPTYTYPQKFVEAEGSNT 341
VDVRDVA ALLLAYE +ASGRY+CSS ++VSD++++LKT YPTYTYP+ FVE EG+
Sbjct: 562 VDVRDVADALLLAYEXPEASGRYICSSVPVKVSDMISVLKTLYPTYTYPKNFVEVEGNTI 383
Query: 340 YNTEKLRKLGWTSRPMEDTLRDSIECYRAMGILN* 236
Y++EKL+KLGW RP+E TL DS+E YRA G+LN*
Sbjct: 382 YSSEKLQKLGWIFRPLEKTLGDSVESYRASGVLN* 278
Score = 107 bits (229), Expect = 7e-023
Identities = 51/79 (64%), Positives = 56/79 (70%)
Frame = +3 / +3
Query: 231 EAQFRMPIAL*HSMLSRRVSSMGLEVHPSFRSFSVLYVLLPSASTNF*G*VYVGYSVFSM 410
+AQFR P AL* S LS RV S GL++HPSF SFS L ++ PS ST F G*VYVGY VFS
Sbjct: 273 DAQFRTPDAL*DSTLSPRVFSKGLKIHPSF*SFSEL*IVFPSTSTKFLG*VYVGYKVFST 452
Query: 411 FTISETLIAGELQRYRPDA 467
ISET ELQ YRPDA
Sbjct: 453 LIISETFTGTELQMYRPDA 509
Score = 103 bits (220), Expect = 1e-021
Identities = 53/95 (55%), Positives = 59/95 (62%)
Frame = +1 / +1
Query: 235 LSSGCP*LCSIRCCLGGCPPWA*RSTLASEASPCCMCCYLPLQRIFEGKCMLDIRSSVCL 414
LSSG LC I L G A*RSTLASE SP +L L + F KCM DIRSSV L
Sbjct: 277 LSSGRQMLCRIPRYLRGSSLKA*RSTLASEVSPSYK*YFLRLLQSFWDKCMSDIRSSVRL 456
Query: 415 QYQRLLLLVNCRGIVLMPADFRKPTEGHQRHHEHP 519
YQRLLL++NCR V P F P E H++HHEHP
Sbjct: 457 SYQRLLLVLNCRCTVQTPLVFHMPIEEHRQHHEHP 561
>gb|BJ450325.1|BJ450325 BJ450325 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak29b22 5', mRNA sequence
Length = 548
Score = 156 bits (335), Expect = 2e-037
Identities = 61/136 (44%), Positives = 91/136 (66%)
Frame = -2 / +1
Query: 790 DWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHEAFAYAAKTGLDIVTICPSLVIGPL 611
DWP+G+ E WSD E+CR N+ WY ++K AE A Y +TGL +VT+ P+LV GPL
Sbjct: 52 DWPQGKIRDESCWSDKEFCRSNQSWYPVAKIAAEAAALEYGRETGLGVVTLNPALVFGPL 231
Query: 610 LQPAVNTSVKVFLSYIKGDQEIVKDGPKNLVDVRDVAGALLLAYENLQASGRYLCSSPAI 431
LQP +NTS + + +++G + +D ++VDVRDVA ALLL YE +A+GR++C+ I
Sbjct: 232 LQPTINTSSQFLIYFLRGGPDETRDKLWHIVDVRDVADALLLLYEAPEATGRHICAPHFI 411
Query: 430 RVSDIVNILKTEYPTY 383
+++ +LK+ YP Y
Sbjct: 412 TARELLGLLKSMYPGY 459
>gb|AV836830.1|AV836830 AV836830 K. Sato unpublished cDNA library: Hordeum vulgare subsp.
vulgare seedling leaves second leaf stage Hordeum
vulgare subsp. vulgare cDNA clone basd27a15, mRNA
sequence
Length = 735
Score = 127 bits (273), Expect(2) = 1e-035
Identities = 53/114 (46%), Positives = 75/114 (65%)
Frame = -2 / -1
Query: 718 WYFLSKTLAEHEAFAYAAKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIKGDQEIVK 539
WY L+KT+AE + YA K L+ VT+CP +V+GP LQ VNT+ ++ L IKG ++
Sbjct: 732 WYCLAKTVAEQTVWEYAEKNELNAVTVCPCIVLGPQLQRVVNTTSELLLYVIKGGPNVLN 553
Query: 538 DGPKNLVDVRDVAGALLLAYENLQASGRYLCSSPAIRVSDIVNILKTEYPTYTY 377
D ++VDVRDVA ALLL YE ++SGRY+C+ I + ++ +LK YP Y Y
Sbjct: 552 DMLWHIVDVRDVADALLLVYEKPESSGRYICAPNYISTNAMLELLKKTYPDYNY 391
Score = 41.8 bits (85), Expect(2) = 1e-035
Identities = 17/29 (58%), Positives = 20/29 (68%)
Frame = -2 / -1
Query: 328 KLRKLGWTSRPMEDTLRDSIECYRAMGIL 242
KL LGW R +E+TL DSI+ YR GIL
Sbjct: 333 KLNDLGWKPRALEETLLDSIDYYRKTGIL 247
>gb|BJ459873.1|BJ459873 BJ459873 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak38j13 3', mRNA sequence
Length = 411
Score = 149 bits (320), Expect = 2e-035
Identities = 59/91 (64%), Positives = 75/91 (82%)
Frame = -2 / -1
Query: 508 DVAGALLLAYENLQASGRYLCSSPAIRVSDIVNILKTEYPTYTYPQKFVEAEGSNTYNTE 329
DVA ALLLAYE +ASGRY+CSS ++VSD++++LKT YPTYTYP+ FVE EG+ Y++E
Sbjct: 408 DVADALLLAYEKPEASGRYICSSVPVKVSDMISVLKTLYPTYTYPKNFVEVEGNTIYSSE 229
Query: 328 KLRKLGWTSRPMEDTLRDSIECYRAMGILN* 236
KL+KLGW RP+E TL DS+E YRA G+LN*
Sbjct: 228 KLQKLGWIFRPLEKTLGDSVESYRASGVLN* 136
Score = 109 bits (232), Expect = 3e-023
Identities = 52/82 (63%), Positives = 57/82 (69%)
Frame = +3 / +2
Query: 231 EAQFRMPIAL*HSMLSRRVSSMGLEVHPSFRSFSVLYVLLPSASTNF*G*VYVGYSVFSM 410
+AQFR P AL* S LS RV S GL++HPSF SFS L ++ PS ST F G*VYVGY VFS
Sbjct: 131 DAQFRTPDAL*DSTLSPRVFSKGLKIHPSF*SFSEL*IVFPSTSTKFLG*VYVGYKVFST 310
Query: 411 FTISETLIAGELQRYRPDACRF 476
ISET ELQ YRPDA F
Sbjct: 311 LIISETFTGTELQMYRPDASGF 376
>gb|CA013420.1|CA013420 HT08G10r HT Hordeum vulgare subsp. vulgare cDNA clone HT08G10
5-PRIME, mRNA sequence
Length = 535
Score = 144 bits (310), Expect = 5e-034
Identities = 57/100 (57%), Positives = 68/100 (68%)
Frame = -2 / +2
Query: 862 KACYEAKAKRXXXXXXXXXVFNNPDWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHE 683
KAC EAK KR V NP WP+G+ ED WSD +YCR E WY LSKTLAE +
Sbjct: 236 KACSEAKVKRVVMVSSVAAVMTNPSWPEGKPMDEDCWSDVDYCRTTENWYNLSKTLAELQ 415
Query: 682 AFAYAAKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYI 563
AF YA ++GLD+VT+CPSLVIGPLLQP VN S V + ++
Sbjct: 416 AFDYAKRSGLDVVTVCPSLVIGPLLQPTVNASSSVIVDFL 535
>gb|BE454948.2|BE454948 HVSMEh0095J23f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0095J23f, mRNA sequence
Length = 500
Score = 142 bits (304), Expect = 3e-033
Identities = 57/134 (42%), Positives = 86/134 (64%)
Frame = -2 / +2
Query: 643 TICPSLVIGPLLQPAVNTSVKVFLSYIKGDQEIVKDGPKNLVDVRDVAGALLLAYENLQA 464
T CP LV GPLLQP VNTS K + G +++ + ++V+VRDVA ALLL YE ++
Sbjct: 2 TGCPPLVFGPLLQPTVNTSSKFLIYVTNGGPDVMSNKLGHIVNVRDVADALLLVYEKAES 181
Query: 463 SGRYLCSSPAIRVSDIVNILKTEYPTYTYPQKFVEAEGSNTYNTEKLRKLGWTSRPMEDT 284
GRY+C+ I +D+V++LK +P Y+Y V+ + +++KL+ LGW R +E+T
Sbjct: 182 YGRYICTPNNICTTDLVDLLKKMHPQYSYVNNIVDVDRKAPISSQKLKDLGWKPRKLEET 361
Query: 283 LRDSIECYRAMGIL 242
L DS++CY G+L
Sbjct: 362 LSDSVDCYEKAGLL 403
>gb|BU989665.1|BU989665 HF22F21r HF Hordeum vulgare subsp. vulgare cDNA clone HF22F21
5-PRIME, mRNA sequence
Length = 537
Score = 137 bits (293), Expect = 1e-031
Identities = 59/142 (41%), Positives = 81/142 (57%)
Frame = -2 / +3
Query: 796 NPDWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHEAFAYAAKTGLDIVTICPSLVIG 617
+P WP GE E W+D +YC KN WY SKTLAE A+ +A + GLD+V + P V+G
Sbjct: 66 SPGWPAGEVLDERCWTDIDYCDKNGVWYPASKTLAEKAAWKFAEENGLDVVVVNPGTVLG 245
Query: 616 PLLQPAVNTSVKVFLSYIKGDQEIVKDGPKNLVDVRDVAGALLLAYENLQASGRYLCSSP 437
P++ P +N S+ +FL ++G E KD V V DVA A + +E ASGR+LC P
Sbjct: 246 PMIPPRINASMAMFLRLLEGCTEEYKDFFIGPVHVEDVALAHITLFEKPSASGRHLCVEP 425
Query: 436 AIRVSDIVNILKTEYPTYTYPQ 371
SD + + YP Y P+
Sbjct: 426 ICHWSDFASKVAELYPNYKVPK 491
>gb|CA027702.1|CA027702 HZ59M02r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ59M02
5-PRIME, mRNA sequence
Length = 464
Score = 136 bits (291), Expect = 2e-031
Identities = 60/132 (45%), Positives = 81/132 (61%)
Frame = -2 / +2
Query: 763 EDSWSDGEYCRKNEEWYFLSKTLAEHEAFAYAAKTGLDIVTICPSLVIGPLLQPAVNTSV 584
E +S E C KN++WY LSKTLAE A+ +A GL+I+TI P++VIGPLLQP +NTS
Sbjct: 56 ETWFSSAEVCEKNQQWYVLSKTLAEEAAWKFAKDNGLEIITINPTMVIGPLLQPTLNTSA 235
Query: 583 KVFLSYIKGDQEIVKDGPKNLVDVRDVAGALLLAYENLQASGRYLCSSPAIRVSDIVNIL 404
+ L +I G + V+V+DVA A +LAYE+ A+GRY I SD+V I+
Sbjct: 236 EAILKFINGSSSTYANFCFGWVNVKDVALAHILAYEDPSANGRYCMVERVIHHSDLVKII 415
Query: 403 KTEYPTYTYPQK 368
YP + P K
Sbjct: 416 HEMYPEFPVPDK 451
>gb|BJ452324.1|BJ452324 BJ452324 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak38j13 5', mRNA sequence
Length = 430
Score = 130 bits (278), Expect(2) = 9e-031
Identities = 49/78 (62%), Positives = 65/78 (83%)
Frame = -2 / +3
Query: 469 QASGRYLCSSPAIRVSDIVNILKTEYPTYTYPQKFVEAEGSNTYNTEKLRKLGWTSRPME 290
+ASGRY+CSS ++VSD++++LKT YPTYTYP+ FVE EG+ Y++EKL+KLGW RP+E
Sbjct: 42 EASGRYICSSVPVKVSDMISVLKTLYPTYTYPKNFVEVEGNTIYSSEKLQKLGWIFRPLE 221
Query: 289 DTLRDSIECYRAMGILN* 236
TL DS+E YRA G+LN*
Sbjct: 222 KTLGDSVESYRASGVLN* 275
Score = 108 bits (231), Expect = 4e-023
Identities = 52/82 (63%), Positives = 57/82 (69%)
Frame = +3 / -1
Query: 231 EAQFRMPIAL*HSMLSRRVSSMGLEVHPSFRSFSVLYVLLPSASTNF*G*VYVGYSVFSM 410
+AQFR P AL* S LS RV S GL++HPSF SFS L ++ PS ST F G*VYVGY VFS
Sbjct: 280 DAQFRTPDAL*DSTLSPRVFSKGLKIHPSF*SFSEL*IVFPSTSTKFLG*VYVGYKVFST 101
Query: 411 FTISETLIAGELQRYRPDACRF 476
ISET ELQ YRPDA F
Sbjct: 100 LIISETFTGTELQMYRPDASVF 35
Score = 23.5 bits (45), Expect(2) = 9e-031
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = -2 / +1
Query: 508 DVAGALLLAYE 476
DVA ALLLAYE
Sbjct: 4 DVADALLLAYE 36
>gb|BI960410.1|BI960410 HVSMEn0024I04f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0024I04f, mRNA sequence
Length = 675
Score = 131 bits (280), Expect = 6e-030
Identities = 57/123 (46%), Positives = 77/123 (62%)
Frame = -2 / +2
Query: 736 CRKNEEWYFLSKTLAEHEAFAYAAKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIKG 557
C KN++WY LSKTLAE A+ +A GL+I+TI P++VIGPLLQP +NTS + L +I G
Sbjct: 38 CEKNKQWYVLSKTLAEEAAWKFAKDNGLEIITINPTMVIGPLLQPTLNTSAEAILKFING 217
Query: 556 DQEIVKDGPKNLVDVRDVAGALLLAYENLQASGRYLCSSPAIRVSDIVNILKTEYPTYTY 377
+ V+V+DVA A +LAYE+ A+GRY I SD+V I+ YP +
Sbjct: 218 SSSTYANFCFGWVNVKDVALAHILAYEDPSANGRYCMVERVIHHSDLVKIIHEMYPEFPV 397
Query: 376 PQK 368
P K
Sbjct: 398 PDK 406
>gb|BU987846.1|BU987846 HF15O20r HF Hordeum vulgare subsp. vulgare cDNA clone HF15O20
5-PRIME, mRNA sequence
Length = 493
Score = 127 bits (273), Expect = 6e-029
Identities = 55/129 (42%), Positives = 75/129 (58%)
Frame = -2 / +3
Query: 796 NPDWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHEAFAYAAKTGLDIVTICPSLVIG 617
+P WP GE E W+D +YC KN WY SKTLAE A+ +A + GLD+V + P V+G
Sbjct: 93 SPGWPAGEVLDERCWTDIDYCDKNGVWYPASKTLAEKAAWKFAEENGLDVVVVNPGTVLG 272
Query: 616 PLLQPAVNTSVKVFLSYIKGDQEIVKDGPKNLVDVRDVAGALLLAYENLQASGRYLCSSP 437
P++ P +N S+ +FL ++G E KD V V DVA A + +E ASGR+LC P
Sbjct: 273 PMIPPRINASMAMFLRLLEGCTEEYKDFFIGPVHVEDVALAHITLFEKPSASGRHLCVEP 452
Query: 436 AIRVSDIVN 410
SD +
Sbjct: 453 ICHWSDFAS 479
>gb|BI958488.1|BI958488 HVSMEn0015E11f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0015E11f, mRNA sequence
Length = 620
Score = 124 bits (265), Expect = 7e-028
Identities = 54/127 (42%), Positives = 73/127 (57%)
Frame = -2 / +1
Query: 748 DGEYCRKNEEWYFLSKTLAEHEAFAYAAKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLS 569
D E+C+K + WY K +AE A+ A G+D+V + P LV+GPLLQP VN S L
Sbjct: 1 DLEFCKKTKNWYCYGKAVAEQAAWEKARARGVDLVVVNPVLVVGPLLQPTVNASAAHILK 180
Query: 568 YIKGDQEIVKDGPKNLVDVRDVAGALLLAYENLQASGRYLCSSPAIRVSDIVNILKTEYP 389
Y+ G + + VDVRDVAGA L +E QASGRYLC+ + D+ +IL +P
Sbjct: 181 YLDGSARKYANAVQAYVDVRDVAGAHLRVFEAPQASGRYLCAERVLHRQDVFHILSKLFP 360
Query: 388 TYTYPQK 368
Y P +
Sbjct: 361 *YPVPTR 381
>gb|AV936413.1|AV936413 AV936413 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal11d16 3', mRNA sequence
Length = 606
Score = 116 bits (249), Expect(2) = 2e-027
Identities = 53/130 (40%), Positives = 75/130 (57%)
Frame = -2 / -3
Query: 742 EYCRKNEEWYFLSKTLAEHEAFAYAAKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYI 563
E C+KN++WY LSKTLAE A+ ++ +I+ + P++VIGPLLQP +N SV+ L+ I
Sbjct: 517 ELCKKNQQWYTLSKTLAEEAAWKFSKDNEQEIIVMNPTMVIGPLLQPTLNASVEAVLNLI 338
Query: 562 KGDQEIVKDGPKNLVDVRDVAGALLLAYENLQASGRYLCSSPAIRVSDIVNILKTEYPTY 383
G + V+VRDVA A +LAYE A+GRY S++V I+ YP
Sbjct: 337 NGSSPTCPNYAHGWVNVRDVALAHILAYEVPSANGRYCIVERVAHYSELVKIICKMYPNI 158
Query: 382 TYPQKFVEAE 353
P K + E
Sbjct: 157 PLPDKCADDE 128
Score = 25.8 bits (50), Expect(2) = 2e-027
Identities = 7/23 (30%), Positives = 16/23 (69%)
Frame = -2 / -1
Query: 310 WTSRPMEDTLRDSIECYRAMGIL 242
WT P+E +++++IE ++ G +
Sbjct: 75 WTLIPLETSIKETIESFKEKGFV 7
>gb|CA007077.1|CA007077 HU06K19r HU Hordeum vulgare subsp. vulgare cDNA clone HU06K19
5-PRIME, mRNA sequence
Length = 459
Score = 122 bits (262), Expect = 2e-027
Identities = 48/71 (67%), Positives = 53/71 (74%)
Frame = -2 / +1
Query: 862 KACYEAKAKRXXXXXXXXXVFNNPDWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHE 683
KAC EAK KR VFNNP+WPKG+ FTEDSWSD + CRK E+WY LSKT AE E
Sbjct: 247 KACNEAKVKRVVIVSSCAAVFNNPNWPKGKVFTEDSWSDEDLCRKGEDWYLLSKTRAERE 426
Query: 682 AFAYAAKTGLD 650
AFAYAAKTG+D
Sbjct: 427 AFAYAAKTGMD 459
>gb|AV913397.1|AV913397 AV913397 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags21o15 5', mRNA sequence
Length = 521
Score = 120 bits (257), Expect = 9e-027
Identities = 49/71 (69%), Positives = 54/71 (76%)
Frame = -2 / +1
Query: 862 KACYEAKAKRXXXXXXXXXVFNNPDWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHE 683
KAC EAK KR VFNNP+WPKG+ FTEDSW D + CRK E+WY LSKT AE E
Sbjct: 307 KACNEAKVKRVXIVXSCAAVFNNPNWPKGKVFTEDSWXDEDLCRKGEDWYLLSKTRAERE 486
Query: 682 AFAYAAKTGLD 650
AFAYAAKTG+D
Sbjct: 487 AFAYAAKTGMD 519
>gb|AV931570.1|AV931570 AV931570 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd23e18 3', mRNA sequence
Length = 605
Score = 120 bits (257), Expect = 9e-027
Identities = 54/117 (46%), Positives = 72/117 (61%)
Frame = -2 / -2
Query: 718 WYFLSKTLAEHEAFAYAAKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIKGDQEIVK 539
WY LSKTLAE A+ +A GL+I+TI P++VIGPLLQP +NTS + L +I G
Sbjct: 604 WYVLSKTLAEEAAWKFAKDNGLEIITINPTMVIGPLLQPTLNTSAEAILKFINGSSSTYA 425
Query: 538 DGPKNLVDVRDVAGALLLAYENLQASGRYLCSSPAIRVSDIVNILKTEYPTYTYPQK 368
+ V+V+DVA A +LAYE+ A+GRY I SD+V I+ YP + P K
Sbjct: 424 NFCFGWVNVKDVALAHILAYEDPSANGRYCMVERVIHHSDLVKIIHEMYPEFPVPDK 254
>gb|AV913390.1|AV913390 AV913390 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags21o04 5', mRNA sequence
Length = 518
Score = 120 bits (256), Expect = 1e-026
Identities = 47/70 (67%), Positives = 52/70 (74%)
Frame = -2 / +2
Query: 862 KACYEAKAKRXXXXXXXXXVFNNPDWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHE 683
KAC EAK KR VFNNP+WPKG+ FTEDSWSD + CRK E+WY LSKT AE E
Sbjct: 308 KACNEAKVKRVVIVSSCAAVFNNPNWPKGKVFTEDSWSDEDLCRKGEDWYLLSKTRAERE 487
Query: 682 AFAYAAKTGL 653
AFAYAAKTG+
Sbjct: 488 AFAYAAKTGM 517
>gb|AV915311.1|AV915311 AV915311 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags13n08 5', mRNA sequence
Length = 578
Score = 120 bits (256), Expect = 1e-026
Identities = 47/70 (67%), Positives = 52/70 (74%)
Frame = -2 / +2
Query: 862 KACYEAKAKRXXXXXXXXXVFNNPDWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHE 683
KAC EAK KR VFNNP+WPKG+ FTEDSWSD + CRK E+WY LSKT AE E
Sbjct: 368 KACNEAKVKRVVIVSSCAAVFNNPNWPKGKVFTEDSWSDEDLCRKGEDWYLLSKTRAERE 547
Query: 682 AFAYAAKTGL 653
AFAYAAKTG+
Sbjct: 548 AFAYAAKTGM 577
>gb|AV935958.1|AV935958 AV935958 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal7d16 3', mRNA sequence
Length = 643
Score = 118 bits (252), Expect = 5e-026
Identities = 53/120 (44%), Positives = 75/120 (62%)
Frame = -2 / -3
Query: 601 AVNTSVKVFLSYIKGDQEIVKDGPKNLVDVRDVAGALLLAYENLQASGRYLCSSPAIRVS 422
AVNTS KV + IKG + + + +VDVRDVA ALLL Y S RY+CS + +
Sbjct: 629 AVNTSSKVLVYMIKGGPDTMNNKFFPIVDVRDVADALLLLYNKAGPSERYICSLEQMDLK 450
Query: 421 DIVNILKTEYPTYTYPQKFVEAEGSNTYNTEKLRKLGWTSRPMEDTLRDSIECYRAMGIL 242
D++ I+K+ YP Y+Y K V+ + + +EKL+ LGW R +E+TL DSIE Y+ G+L
Sbjct: 449 DLLAIMKSMYPNYSYVDKMVDVDFNVGVTSEKLKNLGWKPRKIEETLADSIESYKKAGLL 270
>gb|BJ459644.1|BJ459644 BJ459644 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak37l05 3', mRNA sequence
Length = 534
Score = 118 bits (252), Expect = 5e-026
Identities = 53/120 (44%), Positives = 75/120 (62%)
Frame = -2 / -3
Query: 601 AVNTSVKVFLSYIKGDQEIVKDGPKNLVDVRDVAGALLLAYENLQASGRYLCSSPAIRVS 422
AVNTS KV + IKG + + + +VDVRDVA ALLL Y S RY+CS + +
Sbjct: 484 AVNTSSKVLVYMIKGGPDTMNNKFFPIVDVRDVADALLLLYNKAGPSERYICSLEQMDLK 305
Query: 421 DIVNILKTEYPTYTYPQKFVEAEGSNTYNTEKLRKLGWTSRPMEDTLRDSIECYRAMGIL 242
D++ I+K+ YP Y+Y K V+ + + +EKL+ LGW R +E+TL DSIE Y+ G+L
Sbjct: 304 DLLAIMKSMYPNYSYVDKMVDVDFNVGVTSEKLKNLGWKPRKIEETLADSIESYKKAGLL 125
>gb|AV936300.1|AV936300 AV936300 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal10n14 3', mRNA sequence
Length = 604
Score = 116 bits (249), Expect = 1e-025
Identities = 53/130 (40%), Positives = 75/130 (57%)
Frame = -2 / -3
Query: 742 EYCRKNEEWYFLSKTLAEHEAFAYAAKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYI 563
E C+KN++WY LSKTLAE A+ ++ +I+ + P++VIGPLLQP +N SV+ L+ I
Sbjct: 512 ELCKKNQQWYTLSKTLAEEAAWKFSKDNEQEIIVMNPTMVIGPLLQPTLNASVEAVLNLI 333
Query: 562 KGDQEIVKDGPKNLVDVRDVAGALLLAYENLQASGRYLCSSPAIRVSDIVNILKTEYPTY 383
G + V+VRDVA A +LAYE A+GRY S++V I+ YP
Sbjct: 332 NGSSPTCPNYAHGWVNVRDVALAHILAYEVPSANGRYCIVERVAHYSELVKIICKMYPNI 153
Query: 382 TYPQKFVEAE 353
P K + E
Sbjct: 152 PLPDKCADDE 123
>gb|AV936403.1|AV936403 AV936403 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal11d04 3', mRNA sequence
Length = 647
Score = 116 bits (249), Expect = 1e-025
Identities = 53/130 (40%), Positives = 75/130 (57%)
Frame = -2 / -2
Query: 742 EYCRKNEEWYFLSKTLAEHEAFAYAAKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYI 563
E C+KN++WY LSKTLAE A+ ++ +I+ + P++VIGPLLQP +N SV+ L+ I
Sbjct: 544 ELCKKNQQWYTLSKTLAEEAAWKFSKDNEQEIIVMNPTMVIGPLLQPTLNASVEAVLNLI 365
Query: 562 KGDQEIVKDGPKNLVDVRDVAGALLLAYENLQASGRYLCSSPAIRVSDIVNILKTEYPTY 383
G + V+VRDVA A +LAYE A+GRY S++V I+ YP
Sbjct: 364 NGSSPTCPNYAHGWVNVRDVALAHILAYEVPSANGRYCIVERVAHYSELVKIICKMYPNI 185
Query: 382 TYPQKFVEAE 353
P K + E
Sbjct: 184 PLPDKCADDE 155
>gb|BM098690.1|BM098690 EBem08_SQ003_M19_R embryo, 40 DPA, no treatment, cv Optic, EBem08
Hordeum vulgare subsp. vulgare cDNA clone
EBem08_SQ003_M19 5', mRNA sequence
Length = 387
Score = 116 bits (247), Expect = 2e-025
Identities = 47/84 (55%), Positives = 60/84 (71%)
Frame = -2 / +2
Query: 742 EYCRKNEEWYFLSKTLAEHEAFAYAAKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYI 563
+ CRK E+WY LSKT AE EAFAYAAKTG+D+V I PSLV+GPL+QP VN S K+ L Y+
Sbjct: 5 DLCRKGEDWYLLSKTRAEREAFAYAAKTGMDVVAILPSLVLGPLMQPTVNASSKILLKYL 184
Query: 562 KGDQEIVKDGPKNLVDVRDVAGAL 491
KG+ E V+ + V+ +G L
Sbjct: 185 KGEHETVEKTLGDSVESYKASGIL 256
>gb|AV911222.1|AV911222 AV911222 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak12h02 3', mRNA sequence
Length = 652
Score = 116 bits (247), Expect = 2e-025
Identities = 53/130 (40%), Positives = 75/130 (57%)
Frame = -2 / -2
Query: 742 EYCRKNEEWYFLSKTLAEHEAFAYAAKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYI 563
E C+KN++WY LSKTLAE A+ ++ +I+ + P++VIGPLLQP +N SV+ L+ I
Sbjct: 615 ELCKKNQQWYTLSKTLAEEAAWKFSKDNEQEIIVMNPTMVIGPLLQPTLNASVEAVLNLI 436
Query: 562 KGDQEIVKDGPKNLVDVRDVAGALLLAYENLQASGRYLCSSPAIRVSDIVNILKTEYPTY 383
G + V+VRDVA A +LAYE A+GRY S++V I+ YP
Sbjct: 435 NGSSPTCPNYAHGWVNVRDVALAHILAYEIPSANGRYCIVERVAHYSELVKIICKMYPNI 256
Query: 382 TYPQKFVEAE 353
P K + E
Sbjct: 255 PLPDKCEDDE 226
>gb|BG343982.1|BG343982 HVSMEg0007E19f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0007E19f, mRNA sequence
Length = 799
Score = 115 bits (246), Expect = 3e-025
Identities = 49/104 (47%), Positives = 68/104 (65%)
Frame = -2 / +2
Query: 763 EDSWSDGEYCRKNEEWYFLSKTLAEHEAFAYAAKTGLDIVTICPSLVIGPLLQPAVNTSV 584
E +S E C KN++WY LSKTLAE A+ +A GL+I+TI P++VIGPLLQP +NTS
Sbjct: 53 ETWFSSAEVCEKNKQWYVLSKTLAEEAAWKFAKDNGLEIITINPTMVIGPLLQPTLNTSA 232
Query: 583 KVFLSYIKGDQEIVKDGPKNLVDVRDVAGALLLAYENLQASGRY 452
+ L +I G + V+V+DVA +LAYEN ++G+Y
Sbjct: 233 EAILKFINGSSSTYTNFCFGWVNVKDVALTHMLAYENPSSNGKY 364
>gb|BM442085.2|BM442085 EBan01_SQ002_C10_R anther, yellow stage, no treatment, cv Optic,
EBan01 Hordeum vulgare subsp. vulgare cDNA clone
EBan01_SQ002_C10 5', mRNA sequence
Length = 213
Score = 114 bits (243), Expect = 8e-025
Identities = 45/68 (66%), Positives = 57/68 (83%)
Frame = -2 / +2
Query: 529 KNLVDVRDVAGALLLAYENLQASGRYLCSSPAIRVSDIVNILKTEYPTYTYPQKFVEAEG 350
KNL DVRDVA ALLLAYE +ASGRY+CSS ++VSD++++LKT YPTYTYP+ FVE EG
Sbjct: 8 KNLEDVRDVADALLLAYEKPEASGRYICSSVPVKVSDMISVLKTLYPTYTYPKNFVEVEG 187
Query: 349 SNTYNTEK 326
+ Y++EK
Sbjct: 188 NTIYSSEK 211
>gb|BG365391.1|BG365391 HVSMEi0002I06f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0002I06f, mRNA sequence
Length = 757
Score = 112 bits (239), Expect = 3e-024
Identities = 43/102 (42%), Positives = 62/102 (60%)
Frame = -2 / +1
Query: 862 KACYEAKAKRXXXXXXXXXVFNNPDWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHE 683
KAC K ++ V NP+WP+ + E WSD ++C+KNE+W ++K +AE
Sbjct: 391 KACSAMKVQKVIGLSSTAAVDFNPNWPQDKLKDESCWSDKDFCQKNEDWCSVAKIVAEQA 570
Query: 682 AFAYAAKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIKG 557
+F Y+ K GL++VT+CP LV GPL+QP VNTS K + G
Sbjct: 571 SFRYSEKNGLNVVTVCPPLVFGPLVQPTVNTSSKFLIYVTNG 696
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 362,130,877
Number of Sequences: 312970
Number of extensions: 5416288
Number of successful extensions: 53244
Number of sequences better than 1.0e-020: 90
length of database: 58,378,179
effective HSP length: 52
effective length of database: 42,103,739
effective search space used: 9894378665
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)