TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3204272.2.1
(739 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BJ447915.1|BJ447915 BJ447915 K. Sato unpublished cDNA li... 279 3e-084
gb|BM817330.1|BM817330 HC111G07_T3.ab1 HC Hordeum vulgare s... 277 7e-083
gb|AV917599.1|AV917599 AV917599 K. Sato unpublished cDNA li... 279 1e-074
gb|AV927973.1|AV927973 AV927973 K. Sato unpublished cDNA li... 279 1e-074
gb|AV930332.1|AV930332 AV930332 K. Sato unpublished cDNA li... 279 1e-074
gb|AV934949.1|AV934949 AV934949 K. Sato unpublished cDNA li... 279 1e-074
gb|BJ466672.1|BJ466672 BJ466672 K. Sato unpublished cDNA li... 279 1e-074
gb|BJ455660.1|BJ455660 BJ455660 K. Sato unpublished cDNA li... 279 1e-074
gb|BM368797.2|BM368797 EBem08_SQ004_K02_R embryo, 40 DPA, n... 218 6e-061
gb|AV930658.1|AV930658 AV930658 K. Sato unpublished cDNA li... 225 2e-058
gb|BU981962.1|BU981962 HA25B23r HA Hordeum vulgare subsp. v... 216 8e-056
gb|BI948632.1|BI948632 HVSMEl0010F06f Hordeum vulgare spike... 160 8e-054
gb|BI776606.2|BI776606 EBpi07_SQ001_B24_R pistil, 12 DPA, n... 204 4e-052
gb|BF631424.2|BF631424 HVSMEb0015O10f Hordeum vulgare seedl... 194 4e-049
gb|BU971681.1|BU971681 HB19F12r BC Hordeum vulgare subsp. v... 193 1e-048
gb|BF259719.2|BF259719 HVSMEf0020B07f Hordeum vulgare seedl... 122 4e-048
gb|CA028489.1|CA028489 HZ62C12r HZ Hordeum vulgare subsp. v... 149 8e-041
gb|BJ464212.1|BJ464212 BJ464212 K. Sato unpublished cDNA li... 123 9e-039
gb|AL500477.1|AL500477 AL500477 Hordeum vulgare Barke etiol... 153 2e-037
gb|BF267850.2|BF267850 HV_CEa0019B08f Hordeum vulgare seedl... 85 5e-036
gb|BM097298.1|BM097298 EBro01_SQ004_M09_R root, 3 week, hyd... 148 4e-035
gb|CA025468.1|CA025468 HZ52E03r HZ Hordeum vulgare subsp. v... 147 8e-035
gb|BE420972.1|BE420972 HWM004.E01 ITEC HWM Barley Leaf Libr... 93 3e-034
gb|AJ462649.1|AJ462649 AJ462649 S00002 Hordeum vulgare subs... 139 1e-032
gb|BU988298.1|BU988298 HF17D19r HF Hordeum vulgare subsp. v... 102 2e-032
gb|AL500044.1|AL500044 AL500044 Hordeum vulgare Barke etiol... 113 1e-030
gb|BI947203.1|BI947203 HVSMEl0004D16f Hordeum vulgare spike... 128 4e-029
gb|BI951143.1|BI951143 HVSMEl0024K06f Hordeum vulgare spike... 127 5e-029
gb|AV836811.1|AV836811 AV836811 K. Sato unpublished cDNA li... 111 2e-028
gb|CA024671.1|CA024671 HZ49P14r HZ Hordeum vulgare subsp. v... 101 4e-028
gb|CA028812.1|CA028812 HZ63F05r HZ Hordeum vulgare subsp. v... 96 2e-026
gb|AV925177.1|AV925177 AV925177 K. Sato unpublished cDNA li... 84 8e-026
gb|BE437755.1|BE437755 SFR007.B08F990617 ITEC SFR Barley Le... 111 4e-024
>gb|BJ447915.1|BJ447915 BJ447915 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak17l17 5', mRNA sequence
Length = 712
Score = 279 bits (604), Expect(2) = 3e-084
Identities = 120/154 (77%), Positives = 128/154 (83%)
Frame = -3 / +1
Query: 650 WNPDAIVFNSWQHYGTPSYWMQTLFRESSGAMFHPTTIXXXXXXXXXXXAITWQDSENSF 471
WNPDAIVFNSWQ YGTPSYWMQ FRESSGAM HP TI AITWQDS N+F
Sbjct: 178 WNPDAIVFNSWQQYGTPSYWMQKFFRESSGAMIHPITISSSYSGSLAASAITWQDSGNNF 357
Query: 470 LRVKVINFGSDAVTLTISTSGLQASINALGSTATVLTSADVMDENSFSNPTKVVPVKSDL 291
LRVK++NFGSD V+LTIS SGLQASINALGS ATVLTS++V DENSFSNPTKVVPV S L
Sbjct: 358 LRVKIVNFGSDTVSLTISVSGLQASINALGSNATVLTSSNVKDENSFSNPTKVVPVTSQL 537
Query: 290 SNAAEQMQVTLAPRSFSSFDLALAQSKLVAEM*A 189
NAAEQMQVTLA SFSSFDLALAQS+LVAEM*+
Sbjct: 538 HNAAEQMQVTLAAHSFSSFDLALAQSELVAEM*S 639
Score = 272 bits (588), Expect(2) = 4e-083
Identities = 125/157 (79%), Positives = 131/157 (83%)
Frame = +1 / -3
Query: 184 SLAHISATSLD*ARARSNELKERGASVTCICSAALLRSLFTGTTLVGLLKEFSSITSADV 363
SL HISATS D*A ARSNE KE ASVTCICSAAL L TGTTLVGLLKEFSS T DV
Sbjct: 644 SLLHISATSSD*ASARSNEEKEWAASVTCICSAALCN*LVTGTTLVGLLKEFSSFTLLDV 465
Query: 364 RTVAVDPRALILAWSPLVEIVRVTASDPKFMTFTLRKLFSESCQVIADAASEPE*LELIV 543
RTVA DP AL+LAWSP EIVR+T SDPKF FTLRKLF ESCQVIADAA EPE*LELIV
Sbjct: 464 RTVAFDPSALMLAWSPDTEIVRLTVSDPKFTIFTLRKLFPESCQVIADAAREPE*LELIV 285
Query: 544 VGWNIAPLDSRKSVCIQ*LGVP*CCQELKTIASGFHL 654
+G +APLDSRK+ CIQ*LGVP CCQELKTIASGFH+
Sbjct: 284 IG*IMAPLDSRKNFCIQ*LGVPYCCQELKTIASGFHV 174
Score = 208 bits (449), Expect(2) = 1e-058
Identities = 87/163 (53%), Positives = 112/163 (68%)
Frame = +3 / -2
Query: 189 SSHLRYKLGLSQGEIERAEGARSQRDLHLLCSIAQIALYRHNLGWVAEGVFIHHIC*CEN 368
+SHL KLGLS+ ++ER EG S+RDLHL + Q+ + H+LGWV E +FI +I EN
Sbjct: 639 ASHLCDKLGLSKRKVERGEGVGSERDLHLFRGVMQLTCHGHDLGWVTERIFILYIAGREN 460
Query: 369 SGG*SQSVDTGLEPTCGDCQGHSI*PEVYDLYS*EAVLGVLPGNRRRCK*T*VAGADCRW 548
S * Q VD LEP DC+ H + PEV++LYS E + G+LPG+ R C T VAG DC W
Sbjct: 459 SSV*PQRVDASLEPGHRDCEAHGVRPEVHNLYSQEVIPGILPGDSRCC*RTRVAGTDCNW 280
Query: 549 MEHSTTRLAEKRLHPVTGSAVMLPGVEDDCVWVPPILLQSSKE 677
M H TTR AEK LHPVT S+V+LPGVEDD +W+P +++ KE
Sbjct: 279 MNHGTTRFAEKLLHPVTRSSVLLPGVEDDSIWIPRLIVVVYKE 151
Score = 130 bits (279), Expect = 7e-030
Identities = 77/142 (54%), Positives = 88/142 (61%)
Frame = +2 / -1
Query: 194 TSPLQAWTEPGRDRTS*RSEEPA*PASALQHCSDRSLPAQPWLGC*RSFHPSHLLM*EQW 373
TS QA TE + RT RS + A*PAS + + A+PWLG *++FHP H *EQ
Sbjct: 634 TSLRQARTEQAQGRTRRRSGQRA*PASVPRRYATDLSRARPWLGY*KNFHPLHCWT*EQ* 455
Query: 374 RLIPER*YWPGAHLWRLSGSQHLTRSL*PLLLGSCSRSPAR*SQTLQVNLSSWS*LSLDG 553
RL P R* PGA RL GS+ TRS LL GS SR+PAR* Q L N SSW+*L LD
Sbjct: 454 RLTPAR*C*PGARTQRL*GSRCPTRSSQSLLSGSYSRNPAR**QMLLENQSSWN*L*LDE 275
Query: 554 T*HH*TRGKASASSNWECRNAA 619
+ HH* RGK SASSN E R A
Sbjct: 274 SWHH*IRGKTSASSN*EFRIVA 209
Score = 129 bits (276), Expect(2) = 2e-034
Identities = 77/138 (55%), Positives = 83/138 (60%)
Frame = -1 / +2
Query: 604 LPVTGCRRFSASLVVLCSIQRQSAPATQVHLQRLRLPGRTPRTAS*E*RS*TSGQML*P* 425
L VTGCR FSA+LVV IQ QS PAT V Q L PGR P S*E*R *TSG+ *
Sbjct: 224 LLVTGCRSFSANLVVP*FIQLQSVPATLVL*QHLLSPGRIPGITS*E*RL*TSGRTP*AS 403
Query: 424 QSPQVGSRPVSTLWDQPPLFSHQQM*WMKTPSATQPRLCR*RAI*AMLQSRCRSRWLLAP 245
QS GSR ST W Q LFS M* MK S TQPR C *+ ++RCRSR L P
Sbjct: 404 QSLCPGSRLASTRWGQTLLFSRPAM*RMKILSVTQPRSCP*QVSCITPRNRCRSRSLPTP 583
Query: 244 SARSISPWLSPSL*RRCE 191
S RS LSPSL +RCE
Sbjct: 584 SPRSTLRLLSPSLSQRCE 637
Score = 129 bits (276), Expect(3) = 3e-042
Identities = 56/100 (56%), Positives = 72/100 (72%)
Frame = -2 / +3
Query: 606 HSQLLDADAFPRV*WCYVPSNDNQLQLLRFTCSVCDYLAGLREQLPKSKGHKLRVRCCDP 427
+S LLDA+ FPR+*WC+ SN NQ QLL F+ S+C +LAG RE LP+SK +LRV +P
Sbjct: 222 NS*LLDAEVFPRI*WCHDSSNYNQFQLLWFSSSICYHLAGFRE*LPESKDCELRVGHREP 401
Query: 426 DNLHKWAPGQYQRSGINRHCSHISRCDG*KLLQQPNQGCA 307
NL APG +QR+G+ R+CSH+ +C G*K Q PNQG A
Sbjct: 402 HNLCVRAPG*HQRAGVKRYCSHVQQCKG*KFFQ*PNQGRA 521
Score = 56.5 bits (117), Expect(2) = 4e-083
Identities = 25/29 (86%), Positives = 26/29 (89%)
Frame = +1 / -3
Query: 652 LFFSSPVRKAASANEARRLPLPASPLQTA 738
LFFSSPVRKAASA+E RRLPLPAS L TA
Sbjct: 119 LFFSSPVRKAASASEPRRLPLPASVLHTA 33
Score = 52.8 bits (109), Expect(2) = 3e-084
Identities = 19/26 (73%), Positives = 23/26 (88%)
Frame = -1 / +2
Query: 733 FGEVMQVEEVFLLHWQKLLSLLDWRR 656
+GE+MQVEE FL+HWQ+L SLL WRR
Sbjct: 38 YGELMQVEEAFLVHWQRLPSLLGWRR 115
Score = 48.7 bits (100), Expect(3) = 3e-042
Identities = 18/26 (69%), Positives = 19/26 (73%)
Frame = -2 / +3
Query: 732 LER*CR*RKSSCFIGRSCFPYWTGEE 655
+E *CR*RK S F GR C PYW GEE
Sbjct: 39 MEN*CR*RKPSWFTGRGCLPYWAGEE 116
Score = 38.2 bits (77), Expect(2) = 1e-058
Identities = 15/23 (65%), Positives = 17/23 (73%)
Frame = +2 / -1
Query: 662 PVQ*GKQLLPMKQEDFLYLHHLS 730
P Q*G+Q LP+ QE FLYLH S
Sbjct: 109 PAQ*GRQPLPVNQEGFLYLHQFS 41
Score = 36.3 bits (73), Expect(2) = 2e-034
Identities = 16/28 (57%), Positives = 16/28 (57%)
Frame = -3 / +1
Query: 737 AVWRGDAGRGXXXXXXXXXXXLTGLEKN 654
AVWR DAGRG LTGLEKN
Sbjct: 34 AVWRTDAGRGSLLGSLAEAAFLTGLEKN 117
Score = 32.2 bits (64), Expect(3) = 3e-042
Identities = 16/27 (59%), Positives = 17/27 (62%)
Frame = -2 / +3
Query: 273 DAGHAGSSLLQLVRSRPGSVQACSGDV 193
DAGHA LL LVR SV+AC DV
Sbjct: 555 DAGHARCPLLLLVRPCACSVRACRRDV 635
>gb|BM817330.1|BM817330 HC111G07_T3.ab1 HC Hordeum vulgare subsp. vulgare cDNA clone
HC111G07_T3.ab1 similar to (AC011708) putative
alpha-L-arabinofuranosidase [Arabidopsis thaliana], mRNA
sequence
Length = 924
Score = 277 bits (600), Expect(2) = 7e-083
Identities = 119/154 (77%), Positives = 127/154 (82%)
Frame = -3 / +3
Query: 650 WNPDAIVFNSWQHYGTPSYWMQTLFRESSGAMFHPTTIXXXXXXXXXXXAITWQDSENSF 471
WNPDAIVFNSWQ YGTPSYWMQ FRESSGAM HP TI AITWQDS N+F
Sbjct: 324 WNPDAIVFNSWQQYGTPSYWMQKFFRESSGAMIHPITISSSYSGSLAASAITWQDSGNNF 503
Query: 470 LRVKVINFGSDAVTLTISTSGLQASINALGSTATVLTSADVMDENSFSNPTKVVPVKSDL 291
LRVK++NFGSD V+LTIS SGLQASINALGS ATVLTS++V DENSFSNPTKVVPV S L
Sbjct: 504 LRVKIVNFGSDTVSLTISVSGLQASINALGSNATVLTSSNVKDENSFSNPTKVVPVTSQL 683
Query: 290 SNAAEQMQVTLAPRSFSSFDLALAQSKLVAEM*A 189
NAAEQMQVTLA SF SFDLALAQS+LVAEM*+
Sbjct: 684 HNAAEQMQVTLAAHSFXSFDLALAQSELVAEM*S 785
Score = 273 bits (590), Expect(2) = 2e-082
Identities = 125/157 (79%), Positives = 131/157 (83%)
Frame = +1 / -3
Query: 184 SLAHISATSLD*ARARSNELKERGASVTCICSAALLRSLFTGTTLVGLLKEFSSITSADV 363
SL HISATS D*A ARSNE KE ASVTCICSAAL L TGTTLVGLLKEFSS T DV
Sbjct: 790 SLLHISATSSD*ASARSNEXKEWAASVTCICSAALCN*LVTGTTLVGLLKEFSSFTLLDV 611
Query: 364 RTVAVDPRALILAWSPLVEIVRVTASDPKFMTFTLRKLFSESCQVIADAASEPE*LELIV 543
RTVA DP AL+LAWSP EIVR+T SDPKF FTLRKLF ESCQVIADAA EPE*LELIV
Sbjct: 610 RTVAFDPSALMLAWSPDTEIVRLTVSDPKFTIFTLRKLFPESCQVIADAAREPE*LELIV 431
Query: 544 VGWNIAPLDSRKSVCIQ*LGVP*CCQELKTIASGFHL 654
+G +APLDSRK+ CIQ*LGVP CCQELKTIASGFH+
Sbjct: 430 IG*IMAPLDSRKNFCIQ*LGVPYCCQELKTIASGFHV 320
Score = 208 bits (449), Expect(2) = 2e-057
Identities = 87/163 (53%), Positives = 112/163 (68%)
Frame = +3 / -2
Query: 189 SSHLRYKLGLSQGEIERAEGARSQRDLHLLCSIAQIALYRHNLGWVAEGVFIHHIC*CEN 368
+SHL KLGLS+ ++ER EG S+RDLHL + Q+ + H+LGWV E +FI +I EN
Sbjct: 785 ASHLCDKLGLSKRKVERXEGVGSERDLHLFRGVMQLTCHGHDLGWVTERIFILYIAGREN 606
Query: 369 SGG*SQSVDTGLEPTCGDCQGHSI*PEVYDLYS*EAVLGVLPGNRRRCK*T*VAGADCRW 548
S * Q VD LEP DC+ H + PEV++LYS E + G+LPG+ R C T VAG DC W
Sbjct: 605 SSV*PQRVDASLEPGHRDCEAHGVRPEVHNLYSQEVIPGILPGDSRCC*RTRVAGTDCNW 426
Query: 549 MEHSTTRLAEKRLHPVTGSAVMLPGVEDDCVWVPPILLQSSKE 677
M H TTR AEK LHPVT S+V+LPGVEDD +W+P +++ KE
Sbjct: 425 MNHGTTRFAEKLLHPVTRSSVLLPGVEDDSIWIPRLIVVVYKE 297
Score = 131 bits (280), Expect = 5e-030
Identities = 77/142 (54%), Positives = 88/142 (61%)
Frame = +2 / -1
Query: 194 TSPLQAWTEPGRDRTS*RSEEPA*PASALQHCSDRSLPAQPWLGC*RSFHPSHLLM*EQW 373
TS QA TE + RT RS + A*PAS + + A+PWLG *++FHP H *EQ
Sbjct: 780 TSLRQARTEQAQGRTXRRSGQRA*PASVPRRYATDLSRARPWLGY*KNFHPLHCWT*EQ* 601
Query: 374 RLIPER*YWPGAHLWRLSGSQHLTRSL*PLLLGSCSRSPAR*SQTLQVNLSSWS*LSLDG 553
RL P R* PGA RL GS+ TRS LL GS SR+PAR* Q L N SSW+*L LD
Sbjct: 600 RLTPAR*C*PGARTQRL*GSRCPTRSSQSLLSGSYSRNPAR**QMLLENQSSWN*L*LDE 421
Query: 554 T*HH*TRGKASASSNWECRNAA 619
+ HH* RGK SASSN E R A
Sbjct: 420 SWHH*IRGKTSASSN*EFRIVA 355
Score = 129 bits (277), Expect(2) = 1e-034
Identities = 77/138 (55%), Positives = 83/138 (60%)
Frame = -1 / +1
Query: 604 LPVTGCRRFSASLVVLCSIQRQSAPATQVHLQRLRLPGRTPRTAS*E*RS*TSGQML*P* 425
L VTGCR FSA+LVV IQ QS PAT V Q L PGR P S*E*R *TSG+ *
Sbjct: 370 LLVTGCRSFSANLVVP*FIQLQSVPATLVL*QHLLSPGRIPGITS*E*RL*TSGRTP*AS 549
Query: 424 QSPQVGSRPVSTLWDQPPLFSHQQM*WMKTPSATQPRLCR*RAI*AMLQSRCRSRWLLAP 245
QS GSR ST W Q LFS M* MK S TQPR C *+ ++RCRSR L P
Sbjct: 550 QSLCPGSRLASTRWGQTLLFSRPAM*RMKILSVTQPRSCP*QVSCITPRNRCRSRSLPTP 729
Query: 244 SARSISPWLSPSL*RRCE 191
S RS LSPSL +RCE
Sbjct: 730 SXRSTLRLLSPSLSQRCE 783
Score = 129 bits (276), Expect(3) = 2e-041
Identities = 56/100 (56%), Positives = 72/100 (72%)
Frame = -2 / +2
Query: 606 HSQLLDADAFPRV*WCYVPSNDNQLQLLRFTCSVCDYLAGLREQLPKSKGHKLRVRCCDP 427
+S LLDA+ FPR+*WC+ SN NQ QLL F+ S+C +LAG RE LP+SK +LRV +P
Sbjct: 368 NS*LLDAEVFPRI*WCHDSSNYNQFQLLWFSSSICYHLAGFRE*LPESKDCELRVGHREP 547
Query: 426 DNLHKWAPGQYQRSGINRHCSHISRCDG*KLLQQPNQGCA 307
NL APG +QR+G+ R+CSH+ +C G*K Q PNQG A
Sbjct: 548 HNLCVRAPG*HQRAGVKRYCSHVQQCKG*KFFQ*PNQGRA 667
Score = 52.8 bits (109), Expect(2) = 2e-082
Identities = 24/29 (82%), Positives = 25/29 (86%)
Frame = +1 / -3
Query: 652 LFFSSPVRKAASANEARRLPLPASPLQTA 738
LFFSSPVRKAASA+E RLPLPAS L TA
Sbjct: 265 LFFSSPVRKAASASEPIRLPLPASVLHTA 179
Score = 50.1 bits (103), Expect(2) = 7e-083
Identities = 18/26 (69%), Positives = 22/26 (84%)
Frame = -1 / +1
Query: 733 FGEVMQVEEVFLLHWQKLLSLLDWRR 656
+GE+MQVEE L+HWQ+L SLL WRR
Sbjct: 184 YGELMQVEEALLVHWQRLPSLLGWRR 261
Score = 46.0 bits (94), Expect(3) = 2e-041
Identities = 17/26 (65%), Positives = 18/26 (69%)
Frame = -2 / +2
Query: 732 LER*CR*RKSSCFIGRSCFPYWTGEE 655
+E *CR*RK F GR C PYW GEE
Sbjct: 185 MEN*CR*RKPYWFTGRGCLPYWAGEE 262
Score = 36.3 bits (73), Expect(2) = 1e-034
Identities = 16/28 (57%), Positives = 16/28 (57%)
Frame = -3 / +3
Query: 737 AVWRGDAGRGXXXXXXXXXXXLTGLEKN 654
AVWR DAGRG LTGLEKN
Sbjct: 180 AVWRTDAGRGSLIGSLAEAAFLTGLEKN 263
Score = 34.1 bits (68), Expect(2) = 2e-057
Identities = 14/23 (60%), Positives = 16/23 (69%)
Frame = +2 / -1
Query: 662 PVQ*GKQLLPMKQEDFLYLHHLS 730
P Q*G+Q LP+ Q FLYLH S
Sbjct: 255 PAQ*GRQPLPVNQ*GFLYLHQFS 187
Score = 32.2 bits (64), Expect(3) = 2e-041
Identities = 16/27 (59%), Positives = 17/27 (62%)
Frame = -2 / +2
Query: 273 DAGHAGSSLLQLVRSRPGSVQACSGDV 193
DAGHA LL LVR SV+AC DV
Sbjct: 701 DAGHARCPLLLLVRPCACSVRACRRDV 781
>gb|AV917599.1|AV917599 AV917599 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags10j19 3', mRNA sequence
Length = 656
Score = 279 bits (604), Expect = 1e-074
Identities = 120/154 (77%), Positives = 128/154 (83%)
Frame = -3 / -2
Query: 650 WNPDAIVFNSWQHYGTPSYWMQTLFRESSGAMFHPTTIXXXXXXXXXXXAITWQDSENSF 471
WNPDAIVFNSWQ YGTPSYWMQ FRESSGAM HP TI AITWQDS N+F
Sbjct: 637 WNPDAIVFNSWQQYGTPSYWMQKFFRESSGAMIHPITISSSYSGSLAASAITWQDSGNNF 458
Query: 470 LRVKVINFGSDAVTLTISTSGLQASINALGSTATVLTSADVMDENSFSNPTKVVPVKSDL 291
LRVK++NFGSD V+LTIS SGLQASINALGS ATVLTS++V DENSFSNPTKVVPV S L
Sbjct: 457 LRVKIVNFGSDTVSLTISVSGLQASINALGSNATVLTSSNVKDENSFSNPTKVVPVTSQL 278
Query: 290 SNAAEQMQVTLAPRSFSSFDLALAQSKLVAEM*A 189
NAAEQMQVTLA SFSSFDLALAQS+LVAEM*+
Sbjct: 277 HNAAEQMQVTLAAHSFSSFDLALAQSELVAEM*S 176
Score = 272 bits (588), Expect = 2e-072
Identities = 125/157 (79%), Positives = 131/157 (83%)
Frame = +1 / +3
Query: 184 SLAHISATSLD*ARARSNELKERGASVTCICSAALLRSLFTGTTLVGLLKEFSSITSADV 363
SL HISATS D*A ARSNE KE ASVTCICSAAL L TGTTLVGLLKEFSS T DV
Sbjct: 171 SLLHISATSSD*ASARSNEEKEWAASVTCICSAALCN*LVTGTTLVGLLKEFSSFTLLDV 350
Query: 364 RTVAVDPRALILAWSPLVEIVRVTASDPKFMTFTLRKLFSESCQVIADAASEPE*LELIV 543
RTVA DP AL+LAWSP EIVR+T SDPKF FTLRKLF ESCQVIADAA EPE*LELIV
Sbjct: 351 RTVAFDPSALMLAWSPDTEIVRLTVSDPKFTIFTLRKLFPESCQVIADAAREPE*LELIV 530
Query: 544 VGWNIAPLDSRKSVCIQ*LGVP*CCQELKTIASGFHL 654
+G +APLDSRK+ CIQ*LGVP CCQELKTIASGFH+
Sbjct: 531 IG*IMAPLDSRKNFCIQ*LGVPYCCQELKTIASGFHV 641
Score = 206 bits (445), Expect = 9e-053
Identities = 85/158 (53%), Positives = 110/158 (69%)
Frame = +3 / +2
Query: 189 SSHLRYKLGLSQGEIERAEGARSQRDLHLLCSIAQIALYRHNLGWVAEGVFIHHIC*CEN 368
+SHL KLGLS+ ++ER EG S+RDLHL + Q+ + H+LGWV E +FI +I EN
Sbjct: 176 ASHLCDKLGLSKRKVERGEGVGSERDLHLFRGVMQLTCHGHDLGWVTERIFILYIAGREN 355
Query: 369 SGG*SQSVDTGLEPTCGDCQGHSI*PEVYDLYS*EAVLGVLPGNRRRCK*T*VAGADCRW 548
S * Q VD LEP DC+ H + PEV++LYS E + G+LPG+ R C T VAG DC W
Sbjct: 356 SSV*PQRVDASLEPGHRDCEAHGVRPEVHNLYSQEVIPGILPGDSRCC*RTRVAGTDCNW 535
Query: 549 MEHSTTRLAEKRLHPVTGSAVMLPGVEDDCVWVPPILL 662
M H TTR AEK LHPVT S+V+LPGVEDD +W+P +++
Sbjct: 536 MNHGTTRFAEKLLHPVTRSSVLLPGVEDDSIWIPRLIV 649
Score = 130 bits (279), Expect = 7e-030
Identities = 77/142 (54%), Positives = 88/142 (61%)
Frame = +2 / +1
Query: 194 TSPLQAWTEPGRDRTS*RSEEPA*PASALQHCSDRSLPAQPWLGC*RSFHPSHLLM*EQW 373
TS QA TE + RT RS + A*PAS + + A+PWLG *++FHP H *EQ
Sbjct: 181 TSLRQARTEQAQGRTRRRSGQRA*PASVPRRYATDLSRARPWLGY*KNFHPLHCWT*EQ* 360
Query: 374 RLIPER*YWPGAHLWRLSGSQHLTRSL*PLLLGSCSRSPAR*SQTLQVNLSSWS*LSLDG 553
RL P R* PGA RL GS+ TRS LL GS SR+PAR* Q L N SSW+*L LD
Sbjct: 361 RLTPAR*C*PGARTQRL*GSRCPTRSSQSLLSGSYSRNPAR**QMLLENQSSWN*L*LDE 540
Query: 554 T*HH*TRGKASASSNWECRNAA 619
+ HH* RGK SASSN E R A
Sbjct: 541 SWHH*IRGKTSASSN*EFRIVA 606
Score = 129 bits (276), Expect = 2e-029
Identities = 77/138 (55%), Positives = 83/138 (60%)
Frame = -1 / -3
Query: 604 LPVTGCRRFSASLVVLCSIQRQSAPATQVHLQRLRLPGRTPRTAS*E*RS*TSGQML*P* 425
L VTGCR FSA+LVV IQ QS PAT V Q L PGR P S*E*R *TSG+ *
Sbjct: 591 LLVTGCRSFSANLVVP*FIQLQSVPATLVL*QHLLSPGRIPGITS*E*RL*TSGRTP*AS 412
Query: 424 QSPQVGSRPVSTLWDQPPLFSHQQM*WMKTPSATQPRLCR*RAI*AMLQSRCRSRWLLAP 245
QS GSR ST W Q LFS M* MK S TQPR C *+ ++RCRSR L P
Sbjct: 411 QSLCPGSRLASTRWGQTLLFSRPAM*RMKILSVTQPRSCP*QVSCITPRNRCRSRSLPTP 232
Query: 244 SARSISPWLSPSL*RRCE 191
S RS LSPSL +RCE
Sbjct: 231 SPRSTLRLLSPSLSQRCE 178
Score = 129 bits (276), Expect(2) = 3e-033
Identities = 56/100 (56%), Positives = 72/100 (72%)
Frame = -2 / -1
Query: 606 HSQLLDADAFPRV*WCYVPSNDNQLQLLRFTCSVCDYLAGLREQLPKSKGHKLRVRCCDP 427
+S LLDA+ FPR+*WC+ SN NQ QLL F+ S+C +LAG RE LP+SK +LRV +P
Sbjct: 593 NS*LLDAEVFPRI*WCHDSSNYNQFQLLWFSSSICYHLAGFRE*LPESKDCELRVGHREP 414
Query: 426 DNLHKWAPGQYQRSGINRHCSHISRCDG*KLLQQPNQGCA 307
NL APG +QR+G+ R+CSH+ +C G*K Q PNQG A
Sbjct: 413 HNLCVRAPG*HQRAGVKRYCSHVQQCKG*KFFQ*PNQGRA 294
Score = 32.2 bits (64), Expect(2) = 3e-033
Identities = 16/27 (59%), Positives = 17/27 (62%)
Frame = -2 / -1
Query: 273 DAGHAGSSLLQLVRSRPGSVQACSGDV 193
DAGHA LL LVR SV+AC DV
Sbjct: 260 DAGHARCPLLLLVRPCACSVRACRRDV 180
>gb|AV927973.1|AV927973 AV927973 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd13h16 3', mRNA sequence
Length = 642
Score = 279 bits (604), Expect = 1e-074
Identities = 120/154 (77%), Positives = 128/154 (83%)
Frame = -3 / -2
Query: 650 WNPDAIVFNSWQHYGTPSYWMQTLFRESSGAMFHPTTIXXXXXXXXXXXAITWQDSENSF 471
WNPDAIVFNSWQ YGTPSYWMQ FRESSGAM HP TI AITWQDS N+F
Sbjct: 623 WNPDAIVFNSWQQYGTPSYWMQKFFRESSGAMIHPITISSSYSGSLAASAITWQDSGNNF 444
Query: 470 LRVKVINFGSDAVTLTISTSGLQASINALGSTATVLTSADVMDENSFSNPTKVVPVKSDL 291
LRVK++NFGSD V+LTIS SGLQASINALGS ATVLTS++V DENSFSNPTKVVPV S L
Sbjct: 443 LRVKIVNFGSDTVSLTISVSGLQASINALGSNATVLTSSNVKDENSFSNPTKVVPVTSQL 264
Query: 290 SNAAEQMQVTLAPRSFSSFDLALAQSKLVAEM*A 189
NAAEQMQVTLA SFSSFDLALAQS+LVAEM*+
Sbjct: 263 HNAAEQMQVTLAAHSFSSFDLALAQSELVAEM*S 162
Score = 272 bits (588), Expect = 2e-072
Identities = 125/157 (79%), Positives = 131/157 (83%)
Frame = +1 / +1
Query: 184 SLAHISATSLD*ARARSNELKERGASVTCICSAALLRSLFTGTTLVGLLKEFSSITSADV 363
SL HISATS D*A ARSNE KE ASVTCICSAAL L TGTTLVGLLKEFSS T DV
Sbjct: 157 SLLHISATSSD*ASARSNEEKEWAASVTCICSAALCN*LVTGTTLVGLLKEFSSFTLLDV 336
Query: 364 RTVAVDPRALILAWSPLVEIVRVTASDPKFMTFTLRKLFSESCQVIADAASEPE*LELIV 543
RTVA DP AL+LAWSP EIVR+T SDPKF FTLRKLF ESCQVIADAA EPE*LELIV
Sbjct: 337 RTVAFDPSALMLAWSPDTEIVRLTVSDPKFTIFTLRKLFPESCQVIADAAREPE*LELIV 516
Query: 544 VGWNIAPLDSRKSVCIQ*LGVP*CCQELKTIASGFHL 654
+G +APLDSRK+ CIQ*LGVP CCQELKTIASGFH+
Sbjct: 517 IG*IMAPLDSRKNFCIQ*LGVPYCCQELKTIASGFHV 627
Score = 206 bits (445), Expect = 9e-053
Identities = 85/158 (53%), Positives = 110/158 (69%)
Frame = +3 / +3
Query: 189 SSHLRYKLGLSQGEIERAEGARSQRDLHLLCSIAQIALYRHNLGWVAEGVFIHHIC*CEN 368
+SHL KLGLS+ ++ER EG S+RDLHL + Q+ + H+LGWV E +FI +I EN
Sbjct: 162 ASHLCDKLGLSKRKVERGEGVGSERDLHLFRGVMQLTCHGHDLGWVTERIFILYIAGREN 341
Query: 369 SGG*SQSVDTGLEPTCGDCQGHSI*PEVYDLYS*EAVLGVLPGNRRRCK*T*VAGADCRW 548
S * Q VD LEP DC+ H + PEV++LYS E + G+LPG+ R C T VAG DC W
Sbjct: 342 SSV*PQRVDASLEPGHRDCEAHGVRPEVHNLYSQEVIPGILPGDSRCC*RTRVAGTDCNW 521
Query: 549 MEHSTTRLAEKRLHPVTGSAVMLPGVEDDCVWVPPILL 662
M H TTR AEK LHPVT S+V+LPGVEDD +W+P +++
Sbjct: 522 MNHGTTRFAEKLLHPVTRSSVLLPGVEDDSIWIPRLIV 635
Score = 130 bits (279), Expect = 7e-030
Identities = 77/142 (54%), Positives = 88/142 (61%)
Frame = +2 / +2
Query: 194 TSPLQAWTEPGRDRTS*RSEEPA*PASALQHCSDRSLPAQPWLGC*RSFHPSHLLM*EQW 373
TS QA TE + RT RS + A*PAS + + A+PWLG *++FHP H *EQ
Sbjct: 167 TSLRQARTEQAQGRTRRRSGQRA*PASVPRRYATDLSRARPWLGY*KNFHPLHCWT*EQ* 346
Query: 374 RLIPER*YWPGAHLWRLSGSQHLTRSL*PLLLGSCSRSPAR*SQTLQVNLSSWS*LSLDG 553
RL P R* PGA RL GS+ TRS LL GS SR+PAR* Q L N SSW+*L LD
Sbjct: 347 RLTPAR*C*PGARTQRL*GSRCPTRSSQSLLSGSYSRNPAR**QMLLENQSSWN*L*LDE 526
Query: 554 T*HH*TRGKASASSNWECRNAA 619
+ HH* RGK SASSN E R A
Sbjct: 527 SWHH*IRGKTSASSN*EFRIVA 592
Score = 129 bits (276), Expect = 2e-029
Identities = 77/138 (55%), Positives = 83/138 (60%)
Frame = -1 / -3
Query: 604 LPVTGCRRFSASLVVLCSIQRQSAPATQVHLQRLRLPGRTPRTAS*E*RS*TSGQML*P* 425
L VTGCR FSA+LVV IQ QS PAT V Q L PGR P S*E*R *TSG+ *
Sbjct: 577 LLVTGCRSFSANLVVP*FIQLQSVPATLVL*QHLLSPGRIPGITS*E*RL*TSGRTP*AS 398
Query: 424 QSPQVGSRPVSTLWDQPPLFSHQQM*WMKTPSATQPRLCR*RAI*AMLQSRCRSRWLLAP 245
QS GSR ST W Q LFS M* MK S TQPR C *+ ++RCRSR L P
Sbjct: 397 QSLCPGSRLASTRWGQTLLFSRPAM*RMKILSVTQPRSCP*QVSCITPRNRCRSRSLPTP 218
Query: 244 SARSISPWLSPSL*RRCE 191
S RS LSPSL +RCE
Sbjct: 217 SPRSTLRLLSPSLSQRCE 164
Score = 129 bits (276), Expect(2) = 3e-033
Identities = 56/100 (56%), Positives = 72/100 (72%)
Frame = -2 / -1
Query: 606 HSQLLDADAFPRV*WCYVPSNDNQLQLLRFTCSVCDYLAGLREQLPKSKGHKLRVRCCDP 427
+S LLDA+ FPR+*WC+ SN NQ QLL F+ S+C +LAG RE LP+SK +LRV +P
Sbjct: 579 NS*LLDAEVFPRI*WCHDSSNYNQFQLLWFSSSICYHLAGFRE*LPESKDCELRVGHREP 400
Query: 426 DNLHKWAPGQYQRSGINRHCSHISRCDG*KLLQQPNQGCA 307
NL APG +QR+G+ R+CSH+ +C G*K Q PNQG A
Sbjct: 399 HNLCVRAPG*HQRAGVKRYCSHVQQCKG*KFFQ*PNQGRA 280
Score = 32.2 bits (64), Expect(2) = 3e-033
Identities = 16/27 (59%), Positives = 17/27 (62%)
Frame = -2 / -1
Query: 273 DAGHAGSSLLQLVRSRPGSVQACSGDV 193
DAGHA LL LVR SV+AC DV
Sbjct: 246 DAGHARCPLLLLVRPCACSVRACRRDV 166
>gb|AV930332.1|AV930332 AV930332 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd22b16 3', mRNA sequence
Length = 646
Score = 279 bits (604), Expect = 1e-074
Identities = 120/154 (77%), Positives = 128/154 (83%)
Frame = -3 / -2
Query: 650 WNPDAIVFNSWQHYGTPSYWMQTLFRESSGAMFHPTTIXXXXXXXXXXXAITWQDSENSF 471
WNPDAIVFNSWQ YGTPSYWMQ FRESSGAM HP TI AITWQDS N+F
Sbjct: 627 WNPDAIVFNSWQQYGTPSYWMQKFFRESSGAMIHPITISSSYSGSLAASAITWQDSGNNF 448
Query: 470 LRVKVINFGSDAVTLTISTSGLQASINALGSTATVLTSADVMDENSFSNPTKVVPVKSDL 291
LRVK++NFGSD V+LTIS SGLQASINALGS ATVLTS++V DENSFSNPTKVVPV S L
Sbjct: 447 LRVKIVNFGSDTVSLTISVSGLQASINALGSNATVLTSSNVKDENSFSNPTKVVPVTSQL 268
Query: 290 SNAAEQMQVTLAPRSFSSFDLALAQSKLVAEM*A 189
NAAEQMQVTLA SFSSFDLALAQS+LVAEM*+
Sbjct: 267 HNAAEQMQVTLAAHSFSSFDLALAQSELVAEM*S 166
Score = 272 bits (588), Expect = 2e-072
Identities = 125/157 (79%), Positives = 131/157 (83%)
Frame = +1 / +2
Query: 184 SLAHISATSLD*ARARSNELKERGASVTCICSAALLRSLFTGTTLVGLLKEFSSITSADV 363
SL HISATS D*A ARSNE KE ASVTCICSAAL L TGTTLVGLLKEFSS T DV
Sbjct: 161 SLLHISATSSD*ASARSNEEKEWAASVTCICSAALCN*LVTGTTLVGLLKEFSSFTLLDV 340
Query: 364 RTVAVDPRALILAWSPLVEIVRVTASDPKFMTFTLRKLFSESCQVIADAASEPE*LELIV 543
RTVA DP AL+LAWSP EIVR+T SDPKF FTLRKLF ESCQVIADAA EPE*LELIV
Sbjct: 341 RTVAFDPSALMLAWSPDTEIVRLTVSDPKFTIFTLRKLFPESCQVIADAAREPE*LELIV 520
Query: 544 VGWNIAPLDSRKSVCIQ*LGVP*CCQELKTIASGFHL 654
+G +APLDSRK+ CIQ*LGVP CCQELKTIASGFH+
Sbjct: 521 IG*IMAPLDSRKNFCIQ*LGVPYCCQELKTIASGFHV 631
Score = 206 bits (445), Expect = 9e-053
Identities = 85/158 (53%), Positives = 110/158 (69%)
Frame = +3 / +1
Query: 189 SSHLRYKLGLSQGEIERAEGARSQRDLHLLCSIAQIALYRHNLGWVAEGVFIHHIC*CEN 368
+SHL KLGLS+ ++ER EG S+RDLHL + Q+ + H+LGWV E +FI +I EN
Sbjct: 166 ASHLCDKLGLSKRKVERGEGVGSERDLHLFRGVMQLTCHGHDLGWVTERIFILYIAGREN 345
Query: 369 SGG*SQSVDTGLEPTCGDCQGHSI*PEVYDLYS*EAVLGVLPGNRRRCK*T*VAGADCRW 548
S * Q VD LEP DC+ H + PEV++LYS E + G+LPG+ R C T VAG DC W
Sbjct: 346 SSV*PQRVDASLEPGHRDCEAHGVRPEVHNLYSQEVIPGILPGDSRCC*RTRVAGTDCNW 525
Query: 549 MEHSTTRLAEKRLHPVTGSAVMLPGVEDDCVWVPPILL 662
M H TTR AEK LHPVT S+V+LPGVEDD +W+P +++
Sbjct: 526 MNHGTTRFAEKLLHPVTRSSVLLPGVEDDSIWIPRLIV 639
Score = 130 bits (279), Expect = 7e-030
Identities = 77/142 (54%), Positives = 88/142 (61%)
Frame = +2 / +3
Query: 194 TSPLQAWTEPGRDRTS*RSEEPA*PASALQHCSDRSLPAQPWLGC*RSFHPSHLLM*EQW 373
TS QA TE + RT RS + A*PAS + + A+PWLG *++FHP H *EQ
Sbjct: 171 TSLRQARTEQAQGRTRRRSGQRA*PASVPRRYATDLSRARPWLGY*KNFHPLHCWT*EQ* 350
Query: 374 RLIPER*YWPGAHLWRLSGSQHLTRSL*PLLLGSCSRSPAR*SQTLQVNLSSWS*LSLDG 553
RL P R* PGA RL GS+ TRS LL GS SR+PAR* Q L N SSW+*L LD
Sbjct: 351 RLTPAR*C*PGARTQRL*GSRCPTRSSQSLLSGSYSRNPAR**QMLLENQSSWN*L*LDE 530
Query: 554 T*HH*TRGKASASSNWECRNAA 619
+ HH* RGK SASSN E R A
Sbjct: 531 SWHH*IRGKTSASSN*EFRIVA 596
Score = 129 bits (276), Expect = 2e-029
Identities = 77/138 (55%), Positives = 83/138 (60%)
Frame = -1 / -3
Query: 604 LPVTGCRRFSASLVVLCSIQRQSAPATQVHLQRLRLPGRTPRTAS*E*RS*TSGQML*P* 425
L VTGCR FSA+LVV IQ QS PAT V Q L PGR P S*E*R *TSG+ *
Sbjct: 581 LLVTGCRSFSANLVVP*FIQLQSVPATLVL*QHLLSPGRIPGITS*E*RL*TSGRTP*AS 402
Query: 424 QSPQVGSRPVSTLWDQPPLFSHQQM*WMKTPSATQPRLCR*RAI*AMLQSRCRSRWLLAP 245
QS GSR ST W Q LFS M* MK S TQPR C *+ ++RCRSR L P
Sbjct: 401 QSLCPGSRLASTRWGQTLLFSRPAM*RMKILSVTQPRSCP*QVSCITPRNRCRSRSLPTP 222
Query: 244 SARSISPWLSPSL*RRCE 191
S RS LSPSL +RCE
Sbjct: 221 SPRSTLRLLSPSLSQRCE 168
Score = 129 bits (276), Expect(2) = 3e-033
Identities = 56/100 (56%), Positives = 72/100 (72%)
Frame = -2 / -1
Query: 606 HSQLLDADAFPRV*WCYVPSNDNQLQLLRFTCSVCDYLAGLREQLPKSKGHKLRVRCCDP 427
+S LLDA+ FPR+*WC+ SN NQ QLL F+ S+C +LAG RE LP+SK +LRV +P
Sbjct: 583 NS*LLDAEVFPRI*WCHDSSNYNQFQLLWFSSSICYHLAGFRE*LPESKDCELRVGHREP 404
Query: 426 DNLHKWAPGQYQRSGINRHCSHISRCDG*KLLQQPNQGCA 307
NL APG +QR+G+ R+CSH+ +C G*K Q PNQG A
Sbjct: 403 HNLCVRAPG*HQRAGVKRYCSHVQQCKG*KFFQ*PNQGRA 284
Score = 32.2 bits (64), Expect(2) = 3e-033
Identities = 16/27 (59%), Positives = 17/27 (62%)
Frame = -2 / -1
Query: 273 DAGHAGSSLLQLVRSRPGSVQACSGDV 193
DAGHA LL LVR SV+AC DV
Sbjct: 250 DAGHARCPLLLLVRPCACSVRACRRDV 170
>gb|AV934949.1|AV934949 AV934949 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal2e14 3', mRNA sequence
Length = 654
Score = 279 bits (604), Expect = 1e-074
Identities = 120/154 (77%), Positives = 128/154 (83%)
Frame = -3 / -1
Query: 650 WNPDAIVFNSWQHYGTPSYWMQTLFRESSGAMFHPTTIXXXXXXXXXXXAITWQDSENSF 471
WNPDAIVFNSWQ YGTPSYWMQ FRESSGAM HP TI AITWQDS N+F
Sbjct: 636 WNPDAIVFNSWQQYGTPSYWMQKFFRESSGAMIHPITISSSYSGSLAASAITWQDSGNNF 457
Query: 470 LRVKVINFGSDAVTLTISTSGLQASINALGSTATVLTSADVMDENSFSNPTKVVPVKSDL 291
LRVK++NFGSD V+LTIS SGLQASINALGS ATVLTS++V DENSFSNPTKVVPV S L
Sbjct: 456 LRVKIVNFGSDTVSLTISVSGLQASINALGSNATVLTSSNVKDENSFSNPTKVVPVTSQL 277
Query: 290 SNAAEQMQVTLAPRSFSSFDLALAQSKLVAEM*A 189
NAAEQMQVTLA SFSSFDLALAQS+LVAEM*+
Sbjct: 276 HNAAEQMQVTLAAHSFSSFDLALAQSELVAEM*S 175
Score = 272 bits (588), Expect = 2e-072
Identities = 125/157 (79%), Positives = 131/157 (83%)
Frame = +1 / +2
Query: 184 SLAHISATSLD*ARARSNELKERGASVTCICSAALLRSLFTGTTLVGLLKEFSSITSADV 363
SL HISATS D*A ARSNE KE ASVTCICSAAL L TGTTLVGLLKEFSS T DV
Sbjct: 170 SLLHISATSSD*ASARSNEEKEWAASVTCICSAALCN*LVTGTTLVGLLKEFSSFTLLDV 349
Query: 364 RTVAVDPRALILAWSPLVEIVRVTASDPKFMTFTLRKLFSESCQVIADAASEPE*LELIV 543
RTVA DP AL+LAWSP EIVR+T SDPKF FTLRKLF ESCQVIADAA EPE*LELIV
Sbjct: 350 RTVAFDPSALMLAWSPDTEIVRLTVSDPKFTIFTLRKLFPESCQVIADAAREPE*LELIV 529
Query: 544 VGWNIAPLDSRKSVCIQ*LGVP*CCQELKTIASGFHL 654
+G +APLDSRK+ CIQ*LGVP CCQELKTIASGFH+
Sbjct: 530 IG*IMAPLDSRKNFCIQ*LGVPYCCQELKTIASGFHV 640
Score = 206 bits (445), Expect = 9e-053
Identities = 85/158 (53%), Positives = 110/158 (69%)
Frame = +3 / +1
Query: 189 SSHLRYKLGLSQGEIERAEGARSQRDLHLLCSIAQIALYRHNLGWVAEGVFIHHIC*CEN 368
+SHL KLGLS+ ++ER EG S+RDLHL + Q+ + H+LGWV E +FI +I EN
Sbjct: 175 ASHLCDKLGLSKRKVERGEGVGSERDLHLFRGVMQLTCHGHDLGWVTERIFILYIAGREN 354
Query: 369 SGG*SQSVDTGLEPTCGDCQGHSI*PEVYDLYS*EAVLGVLPGNRRRCK*T*VAGADCRW 548
S * Q VD LEP DC+ H + PEV++LYS E + G+LPG+ R C T VAG DC W
Sbjct: 355 SSV*PQRVDASLEPGHRDCEAHGVRPEVHNLYSQEVIPGILPGDSRCC*RTRVAGTDCNW 534
Query: 549 MEHSTTRLAEKRLHPVTGSAVMLPGVEDDCVWVPPILL 662
M H TTR AEK LHPVT S+V+LPGVEDD +W+P +++
Sbjct: 535 MNHGTTRFAEKLLHPVTRSSVLLPGVEDDSIWIPRLIV 648
Score = 130 bits (279), Expect = 7e-030
Identities = 77/142 (54%), Positives = 88/142 (61%)
Frame = +2 / +3
Query: 194 TSPLQAWTEPGRDRTS*RSEEPA*PASALQHCSDRSLPAQPWLGC*RSFHPSHLLM*EQW 373
TS QA TE + RT RS + A*PAS + + A+PWLG *++FHP H *EQ
Sbjct: 180 TSLRQARTEQAQGRTRRRSGQRA*PASVPRRYATDLSRARPWLGY*KNFHPLHCWT*EQ* 359
Query: 374 RLIPER*YWPGAHLWRLSGSQHLTRSL*PLLLGSCSRSPAR*SQTLQVNLSSWS*LSLDG 553
RL P R* PGA RL GS+ TRS LL GS SR+PAR* Q L N SSW+*L LD
Sbjct: 360 RLTPAR*C*PGARTQRL*GSRCPTRSSQSLLSGSYSRNPAR**QMLLENQSSWN*L*LDE 539
Query: 554 T*HH*TRGKASASSNWECRNAA 619
+ HH* RGK SASSN E R A
Sbjct: 540 SWHH*IRGKTSASSN*EFRIVA 605
Score = 129 bits (276), Expect = 2e-029
Identities = 77/138 (55%), Positives = 83/138 (60%)
Frame = -1 / -2
Query: 604 LPVTGCRRFSASLVVLCSIQRQSAPATQVHLQRLRLPGRTPRTAS*E*RS*TSGQML*P* 425
L VTGCR FSA+LVV IQ QS PAT V Q L PGR P S*E*R *TSG+ *
Sbjct: 590 LLVTGCRSFSANLVVP*FIQLQSVPATLVL*QHLLSPGRIPGITS*E*RL*TSGRTP*AS 411
Query: 424 QSPQVGSRPVSTLWDQPPLFSHQQM*WMKTPSATQPRLCR*RAI*AMLQSRCRSRWLLAP 245
QS GSR ST W Q LFS M* MK S TQPR C *+ ++RCRSR L P
Sbjct: 410 QSLCPGSRLASTRWGQTLLFSRPAM*RMKILSVTQPRSCP*QVSCITPRNRCRSRSLPTP 231
Query: 244 SARSISPWLSPSL*RRCE 191
S RS LSPSL +RCE
Sbjct: 230 SPRSTLRLLSPSLSQRCE 177
Score = 129 bits (276), Expect(2) = 3e-033
Identities = 56/100 (56%), Positives = 72/100 (72%)
Frame = -2 / -3
Query: 606 HSQLLDADAFPRV*WCYVPSNDNQLQLLRFTCSVCDYLAGLREQLPKSKGHKLRVRCCDP 427
+S LLDA+ FPR+*WC+ SN NQ QLL F+ S+C +LAG RE LP+SK +LRV +P
Sbjct: 592 NS*LLDAEVFPRI*WCHDSSNYNQFQLLWFSSSICYHLAGFRE*LPESKDCELRVGHREP 413
Query: 426 DNLHKWAPGQYQRSGINRHCSHISRCDG*KLLQQPNQGCA 307
NL APG +QR+G+ R+CSH+ +C G*K Q PNQG A
Sbjct: 412 HNLCVRAPG*HQRAGVKRYCSHVQQCKG*KFFQ*PNQGRA 293
Score = 32.2 bits (64), Expect(2) = 3e-033
Identities = 16/27 (59%), Positives = 17/27 (62%)
Frame = -2 / -3
Query: 273 DAGHAGSSLLQLVRSRPGSVQACSGDV 193
DAGHA LL LVR SV+AC DV
Sbjct: 259 DAGHARCPLLLLVRPCACSVRACRRDV 179
>gb|BJ466672.1|BJ466672 BJ466672 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags33f17 3', mRNA sequence
Length = 715
Score = 279 bits (604), Expect = 1e-074
Identities = 120/154 (77%), Positives = 128/154 (83%)
Frame = -3 / -3
Query: 650 WNPDAIVFNSWQHYGTPSYWMQTLFRESSGAMFHPTTIXXXXXXXXXXXAITWQDSENSF 471
WNPDAIVFNSWQ YGTPSYWMQ FRESSGAM HP TI AITWQDS N+F
Sbjct: 644 WNPDAIVFNSWQQYGTPSYWMQKFFRESSGAMIHPITISSSYSGSLAASAITWQDSGNNF 465
Query: 470 LRVKVINFGSDAVTLTISTSGLQASINALGSTATVLTSADVMDENSFSNPTKVVPVKSDL 291
LRVK++NFGSD V+LTIS SGLQASINALGS ATVLTS++V DENSFSNPTKVVPV S L
Sbjct: 464 LRVKIVNFGSDTVSLTISVSGLQASINALGSNATVLTSSNVKDENSFSNPTKVVPVTSQL 285
Query: 290 SNAAEQMQVTLAPRSFSSFDLALAQSKLVAEM*A 189
NAAEQMQVTLA SFSSFDLALAQS+LVAEM*+
Sbjct: 284 HNAAEQMQVTLAAHSFSSFDLALAQSELVAEM*S 183
Score = 272 bits (588), Expect = 2e-072
Identities = 125/157 (79%), Positives = 131/157 (83%)
Frame = +1 / +1
Query: 184 SLAHISATSLD*ARARSNELKERGASVTCICSAALLRSLFTGTTLVGLLKEFSSITSADV 363
SL HISATS D*A ARSNE KE ASVTCICSAAL L TGTTLVGLLKEFSS T DV
Sbjct: 178 SLLHISATSSD*ASARSNEEKEWAASVTCICSAALCN*LVTGTTLVGLLKEFSSFTLLDV 357
Query: 364 RTVAVDPRALILAWSPLVEIVRVTASDPKFMTFTLRKLFSESCQVIADAASEPE*LELIV 543
RTVA DP AL+LAWSP EIVR+T SDPKF FTLRKLF ESCQVIADAA EPE*LELIV
Sbjct: 358 RTVAFDPSALMLAWSPDTEIVRLTVSDPKFTIFTLRKLFPESCQVIADAAREPE*LELIV 537
Query: 544 VGWNIAPLDSRKSVCIQ*LGVP*CCQELKTIASGFHL 654
+G +APLDSRK+ CIQ*LGVP CCQELKTIASGFH+
Sbjct: 538 IG*IMAPLDSRKNFCIQ*LGVPYCCQELKTIASGFHV 648
Score = 208 bits (449), Expect = 3e-053
Identities = 87/163 (53%), Positives = 112/163 (68%)
Frame = +3 / +3
Query: 189 SSHLRYKLGLSQGEIERAEGARSQRDLHLLCSIAQIALYRHNLGWVAEGVFIHHIC*CEN 368
+SHL KLGLS+ ++ER EG S+RDLHL + Q+ + H+LGWV E +FI +I EN
Sbjct: 183 ASHLCDKLGLSKRKVERGEGVGSERDLHLFRGVMQLTCHGHDLGWVTERIFILYIAGREN 362
Query: 369 SGG*SQSVDTGLEPTCGDCQGHSI*PEVYDLYS*EAVLGVLPGNRRRCK*T*VAGADCRW 548
S * Q VD LEP DC+ H + PEV++LYS E + G+LPG+ R C T VAG DC W
Sbjct: 363 SSV*PQRVDASLEPGHRDCEAHGVRPEVHNLYSQEVIPGILPGDSRCC*RTRVAGTDCNW 542
Query: 549 MEHSTTRLAEKRLHPVTGSAVMLPGVEDDCVWVPPILLQSSKE 677
M H TTR AEK LHPVT S+V+LPGVEDD +W+P +++ KE
Sbjct: 543 MNHGTTRFAEKLLHPVTRSSVLLPGVEDDSIWIPRLIVVVYKE 671
Score = 130 bits (279), Expect = 7e-030
Identities = 77/142 (54%), Positives = 88/142 (61%)
Frame = +2 / +2
Query: 194 TSPLQAWTEPGRDRTS*RSEEPA*PASALQHCSDRSLPAQPWLGC*RSFHPSHLLM*EQW 373
TS QA TE + RT RS + A*PAS + + A+PWLG *++FHP H *EQ
Sbjct: 188 TSLRQARTEQAQGRTRRRSGQRA*PASVPRRYATDLSRARPWLGY*KNFHPLHCWT*EQ* 367
Query: 374 RLIPER*YWPGAHLWRLSGSQHLTRSL*PLLLGSCSRSPAR*SQTLQVNLSSWS*LSLDG 553
RL P R* PGA RL GS+ TRS LL GS SR+PAR* Q L N SSW+*L LD
Sbjct: 368 RLTPAR*C*PGARTQRL*GSRCPTRSSQSLLSGSYSRNPAR**QMLLENQSSWN*L*LDE 547
Query: 554 T*HH*TRGKASASSNWECRNAA 619
+ HH* RGK SASSN E R A
Sbjct: 548 SWHH*IRGKTSASSN*EFRIVA 613
Score = 129 bits (276), Expect = 2e-029
Identities = 77/138 (55%), Positives = 83/138 (60%)
Frame = -1 / -1
Query: 604 LPVTGCRRFSASLVVLCSIQRQSAPATQVHLQRLRLPGRTPRTAS*E*RS*TSGQML*P* 425
L VTGCR FSA+LVV IQ QS PAT V Q L PGR P S*E*R *TSG+ *
Sbjct: 598 LLVTGCRSFSANLVVP*FIQLQSVPATLVL*QHLLSPGRIPGITS*E*RL*TSGRTP*AS 419
Query: 424 QSPQVGSRPVSTLWDQPPLFSHQQM*WMKTPSATQPRLCR*RAI*AMLQSRCRSRWLLAP 245
QS GSR ST W Q LFS M* MK S TQPR C *+ ++RCRSR L P
Sbjct: 418 QSLCPGSRLASTRWGQTLLFSRPAM*RMKILSVTQPRSCP*QVSCITPRNRCRSRSLPTP 239
Query: 244 SARSISPWLSPSL*RRCE 191
S RS LSPSL +RCE
Sbjct: 238 SPRSTLRLLSPSLSQRCE 185
Score = 129 bits (276), Expect(2) = 3e-033
Identities = 56/100 (56%), Positives = 72/100 (72%)
Frame = -2 / -2
Query: 606 HSQLLDADAFPRV*WCYVPSNDNQLQLLRFTCSVCDYLAGLREQLPKSKGHKLRVRCCDP 427
+S LLDA+ FPR+*WC+ SN NQ QLL F+ S+C +LAG RE LP+SK +LRV +P
Sbjct: 600 NS*LLDAEVFPRI*WCHDSSNYNQFQLLWFSSSICYHLAGFRE*LPESKDCELRVGHREP 421
Query: 426 DNLHKWAPGQYQRSGINRHCSHISRCDG*KLLQQPNQGCA 307
NL APG +QR+G+ R+CSH+ +C G*K Q PNQG A
Sbjct: 420 HNLCVRAPG*HQRAGVKRYCSHVQQCKG*KFFQ*PNQGRA 301
Score = 32.2 bits (64), Expect(2) = 3e-033
Identities = 16/27 (59%), Positives = 17/27 (62%)
Frame = -2 / -2
Query: 273 DAGHAGSSLLQLVRSRPGSVQACSGDV 193
DAGHA LL LVR SV+AC DV
Sbjct: 267 DAGHARCPLLLLVRPCACSVRACRRDV 187
>gb|BJ455660.1|BJ455660 BJ455660 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak17l17 3', mRNA sequence
Length = 704
Score = 279 bits (604), Expect = 1e-074
Identities = 120/154 (77%), Positives = 128/154 (83%)
Frame = -3 / -3
Query: 650 WNPDAIVFNSWQHYGTPSYWMQTLFRESSGAMFHPTTIXXXXXXXXXXXAITWQDSENSF 471
WNPDAIVFNSWQ YGTPSYWMQ FRESSGAM HP TI AITWQDS N+F
Sbjct: 618 WNPDAIVFNSWQQYGTPSYWMQKFFRESSGAMIHPITISSSYSGSLAASAITWQDSGNNF 439
Query: 470 LRVKVINFGSDAVTLTISTSGLQASINALGSTATVLTSADVMDENSFSNPTKVVPVKSDL 291
LRVK++NFGSD V+LTIS SGLQASINALGS ATVLTS++V DENSFSNPTKVVPV S L
Sbjct: 438 LRVKIVNFGSDTVSLTISVSGLQASINALGSNATVLTSSNVKDENSFSNPTKVVPVTSQL 259
Query: 290 SNAAEQMQVTLAPRSFSSFDLALAQSKLVAEM*A 189
NAAEQMQVTLA SFSSFDLALAQS+LVAEM*+
Sbjct: 258 HNAAEQMQVTLAAHSFSSFDLALAQSELVAEM*S 157
Score = 272 bits (588), Expect(2) = 3e-073
Identities = 125/157 (79%), Positives = 131/157 (83%)
Frame = +1 / +2
Query: 184 SLAHISATSLD*ARARSNELKERGASVTCICSAALLRSLFTGTTLVGLLKEFSSITSADV 363
SL HISATS D*A ARSNE KE ASVTCICSAAL L TGTTLVGLLKEFSS T DV
Sbjct: 152 SLLHISATSSD*ASARSNEEKEWAASVTCICSAALCN*LVTGTTLVGLLKEFSSFTLLDV 331
Query: 364 RTVAVDPRALILAWSPLVEIVRVTASDPKFMTFTLRKLFSESCQVIADAASEPE*LELIV 543
RTVA DP AL+LAWSP EIVR+T SDPKF FTLRKLF ESCQVIADAA EPE*LELIV
Sbjct: 332 RTVAFDPSALMLAWSPDTEIVRLTVSDPKFTIFTLRKLFPESCQVIADAAREPE*LELIV 511
Query: 544 VGWNIAPLDSRKSVCIQ*LGVP*CCQELKTIASGFHL 654
+G +APLDSRK+ CIQ*LGVP CCQELKTIASGFH+
Sbjct: 512 IG*IMAPLDSRKNFCIQ*LGVPYCCQELKTIASGFHV 622
Score = 208 bits (449), Expect = 3e-053
Identities = 87/163 (53%), Positives = 112/163 (68%)
Frame = +3 / +1
Query: 189 SSHLRYKLGLSQGEIERAEGARSQRDLHLLCSIAQIALYRHNLGWVAEGVFIHHIC*CEN 368
+SHL KLGLS+ ++ER EG S+RDLHL + Q+ + H+LGWV E +FI +I EN
Sbjct: 157 ASHLCDKLGLSKRKVERGEGVGSERDLHLFRGVMQLTCHGHDLGWVTERIFILYIAGREN 336
Query: 369 SGG*SQSVDTGLEPTCGDCQGHSI*PEVYDLYS*EAVLGVLPGNRRRCK*T*VAGADCRW 548
S * Q VD LEP DC+ H + PEV++LYS E + G+LPG+ R C T VAG DC W
Sbjct: 337 SSV*PQRVDASLEPGHRDCEAHGVRPEVHNLYSQEVIPGILPGDSRCC*RTRVAGTDCNW 516
Query: 549 MEHSTTRLAEKRLHPVTGSAVMLPGVEDDCVWVPPILLQSSKE 677
M H TTR AEK LHPVT S+V+LPGVEDD +W+P +++ KE
Sbjct: 517 MNHGTTRFAEKLLHPVTRSSVLLPGVEDDSIWIPRLIVVVYKE 645
Score = 130 bits (279), Expect = 7e-030
Identities = 77/142 (54%), Positives = 88/142 (61%)
Frame = +2 / +3
Query: 194 TSPLQAWTEPGRDRTS*RSEEPA*PASALQHCSDRSLPAQPWLGC*RSFHPSHLLM*EQW 373
TS QA TE + RT RS + A*PAS + + A+PWLG *++FHP H *EQ
Sbjct: 162 TSLRQARTEQAQGRTRRRSGQRA*PASVPRRYATDLSRARPWLGY*KNFHPLHCWT*EQ* 341
Query: 374 RLIPER*YWPGAHLWRLSGSQHLTRSL*PLLLGSCSRSPAR*SQTLQVNLSSWS*LSLDG 553
RL P R* PGA RL GS+ TRS LL GS SR+PAR* Q L N SSW+*L LD
Sbjct: 342 RLTPAR*C*PGARTQRL*GSRCPTRSSQSLLSGSYSRNPAR**QMLLENQSSWN*L*LDE 521
Query: 554 T*HH*TRGKASASSNWECRNAA 619
+ HH* RGK SASSN E R A
Sbjct: 522 SWHH*IRGKTSASSN*EFRIVA 587
Score = 129 bits (276), Expect = 2e-029
Identities = 77/138 (55%), Positives = 83/138 (60%)
Frame = -1 / -1
Query: 604 LPVTGCRRFSASLVVLCSIQRQSAPATQVHLQRLRLPGRTPRTAS*E*RS*TSGQML*P* 425
L VTGCR FSA+LVV IQ QS PAT V Q L PGR P S*E*R *TSG+ *
Sbjct: 572 LLVTGCRSFSANLVVP*FIQLQSVPATLVL*QHLLSPGRIPGITS*E*RL*TSGRTP*AS 393
Query: 424 QSPQVGSRPVSTLWDQPPLFSHQQM*WMKTPSATQPRLCR*RAI*AMLQSRCRSRWLLAP 245
QS GSR ST W Q LFS M* MK S TQPR C *+ ++RCRSR L P
Sbjct: 392 QSLCPGSRLASTRWGQTLLFSRPAM*RMKILSVTQPRSCP*QVSCITPRNRCRSRSLPTP 213
Query: 244 SARSISPWLSPSL*RRCE 191
S RS LSPSL +RCE
Sbjct: 212 SPRSTLRLLSPSLSQRCE 159
Score = 129 bits (276), Expect(3) = 2e-033
Identities = 56/100 (56%), Positives = 72/100 (72%)
Frame = -2 / -2
Query: 606 HSQLLDADAFPRV*WCYVPSNDNQLQLLRFTCSVCDYLAGLREQLPKSKGHKLRVRCCDP 427
+S LLDA+ FPR+*WC+ SN NQ QLL F+ S+C +LAG RE LP+SK +LRV +P
Sbjct: 574 NS*LLDAEVFPRI*WCHDSSNYNQFQLLWFSSSICYHLAGFRE*LPESKDCELRVGHREP 395
Query: 426 DNLHKWAPGQYQRSGINRHCSHISRCDG*KLLQQPNQGCA 307
NL APG +QR+G+ R+CSH+ +C G*K Q PNQG A
Sbjct: 394 HNLCVRAPG*HQRAGVKRYCSHVQQCKG*KFFQ*PNQGRA 275
Score = 32.2 bits (64), Expect(3) = 2e-033
Identities = 16/27 (59%), Positives = 17/27 (62%)
Frame = -2 / -2
Query: 273 DAGHAGSSLLQLVRSRPGSVQACSGDV 193
DAGHA LL LVR SV+AC DV
Sbjct: 241 DAGHARCPLLLLVRPCACSVRACRRDV 161
Score = 23.5 bits (45), Expect(2) = 3e-073
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +1 / +2
Query: 652 LFFSSPVRK 678
LFFSSPVRK
Sbjct: 677 LFFSSPVRK 703
Score = 21.7 bits (41), Expect(3) = 2e-033
Identities = 6/7 (85%), Positives = 6/7 (85%)
Frame = -2 / -2
Query: 675 PYWTGEE 655
PYW GEE
Sbjct: 700 PYWAGEE 680
>gb|BM368797.2|BM368797 EBem08_SQ004_K02_R embryo, 40 DPA, no treatment, cv Optic, EBem08
Hordeum vulgare subsp. vulgare cDNA clone
EBem08_SQ004_K02 5', mRNA sequence
Length = 479
Score = 218 bits (471), Expect(2) = 6e-061
Identities = 96/126 (76%), Positives = 104/126 (82%)
Frame = +1 / -2
Query: 277 SAALLRSLFTGTTLVGLLKEFSSITSADVRTVAVDPRALILAWSPLVEIVRVTASDPKFM 456
SAA S TGTTL GL KEFSSIT DVRTVAVDP AL+L WSP+ E+VR TAS PKF
Sbjct: 478 SAASRNSTVTGTTLFGLAKEFSSITPPDVRTVAVDPSALMLPWSPVAEMVRPTASGPKFT 299
Query: 457 TFTLRKLFSESCQVIADAASEPE*LELIVVGWNIAPLDSRKSVCIQ*LGVP*CCQELKTI 636
FTLRKLFS SC VIADAAS+PE LEL ++GW +APLDSRKSVCIQ*LGVP CCQELKTI
Sbjct: 298 IFTLRKLFSSSCHVIADAASKPEQLELRLMGWTVAPLDSRKSVCIQ*LGVPYCCQELKTI 119
Query: 637 ASGFHL 654
ASGFH+
Sbjct: 118 ASGFHV 101
Score = 217 bits (469), Expect(2) = 7e-060
Identities = 90/125 (72%), Positives = 98/125 (78%)
Frame = -3 / +3
Query: 650 WNPDAIVFNSWQHYGTPSYWMQTLFRESSGAMFHPTTIXXXXXXXXXXXAITWQDSENSF 471
WNPDAIVFNSWQ YGTPSYWMQTLFRESSGA HP ++ AITW D ENSF
Sbjct: 105 WNPDAIVFNSWQQYGTPSYWMQTLFRESSGATVHPISLSSSCSGLLAASAITWHDDENSF 284
Query: 470 LRVKVINFGSDAVTLTISTSGLQASINALGSTATVLTSADVMDENSFSNPTKVVPVKSDL 291
LRVK++NFG DAV LTIS +GLQ SINALGSTATVLTS VMDENSF+NP KVVPV +L
Sbjct: 285 LRVKIVNFGPDAVGLTISATGLQGSINALGSTATVLTSGGVMDENSFANPNKVVPVTVEL 464
Query: 290 SNAAE 276
+AAE
Sbjct: 465 RDAAE 479
Score = 150 bits (323), Expect(2) = 1e-036
Identities = 64/125 (51%), Positives = 87/125 (69%)
Frame = +3 / -1
Query: 276 LCSIAQIALYRHNLGWVAEGVFIHHIC*CENSGG*SQSVDTGLEPTCGDCQGHSI*PEVY 455
L S+AQ+ +RHNL WV+E V +H+ CEN G S+ +D LEP+ D + H I PE++
Sbjct: 479 LRSVAQLDRHRHNLVWVSERVLVHYTARCENGRGGSERIDAALEPSRRDGEAHGIWPEIH 300
Query: 456 DLYS*EAVLGVLPGNRRRCK*T*VAGADCRWMEHSTTRLAEKRLHPVTGSAVMLPGVEDD 635
+L+S EAVL ++P +RR C+ T A + M+ ST +EKRLHPVTGS+V+LPGVEDD
Sbjct: 299 NLHSQEAVLVIMPRDRRCCQQTRAA*TETDGMDRSTA*FSEKRLHPVTGSSVLLPGVEDD 120
Query: 636 CVWVP 650
VWVP
Sbjct: 119 SVWVP 105
Score = 134 bits (288), Expect(2) = 1e-034
Identities = 61/124 (49%), Positives = 80/124 (64%)
Frame = -2 / +2
Query: 651 VEPXXXXXXXXXXXRHSQLLDADAFPRV*WCYVPSNDNQLQLLRFTCSVCDYLAGLREQL 472
VEP R+SQLLDADAFPR+ CY PS+ +Q +LL F S+CD++A REQL
Sbjct: 104 VEPRRYRLQLLAAIRNSQLLDADAFPRIKRCYGPSHQSQFKLLWFAGSICDHVA**REQL 283
Query: 471 PKSKGHKLRVRCCDPDNLHKWAPGQYQRSGINRHCSHISRCDG*KLLQQPNQGCAGKERS 292
P+S+ + R RC P +L WAPGQ+Q + I+R SHI RC+G +L + P QGCAG R
Sbjct: 284 PESEDCEFRARCRGPHHLGDWAPGQHQCARIHRDRSHIWRCNGRELFR*PKQGCAGDGRV 463
Query: 291 EQCC 280
+ C
Sbjct: 464 ARRC 475
Score = 35.9 bits (72), Expect(2) = 6e-061
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +1 / -2
Query: 652 LFFSSPVRKAASANE 696
LFFSSPVRKAASANE
Sbjct: 46 LFFSSPVRKAASANE 2
Score = 33.1 bits (66), Expect(2) = 7e-060
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = -2 / +2
Query: 696 FIGRSCFPYWTGEE* 652
FIGR FPYW GEE*
Sbjct: 2 FIGRGRFPYWAGEE* 46
Score = 31.8 bits (63), Expect(2) = 1e-034
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -1 / +1
Query: 697 LHWQKLLSLLDWRR 656
LHWQ+ LSLL WRR
Sbjct: 1 LHWQRPLSLLGWRR 42
Score = 22.6 bits (43), Expect(2) = 1e-036
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +2 / -3
Query: 662 PVQ*GKQLLPMK 697
P Q*GK+ LPMK
Sbjct: 36 PAQ*GKRPLPMK 1
>gb|AV930658.1|AV930658 AV930658 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd24j13 3', mRNA sequence
Length = 561
Score = 225 bits (486), Expect = 2e-058
Identities = 105/135 (77%), Positives = 110/135 (81%)
Frame = +1 / +2
Query: 184 SLAHISATSLD*ARARSNELKERGASVTCICSAALLRSLFTGTTLVGLLKEFSSITSADV 363
SL HISATS D*A ARSNE KE ASVTCICSAAL L TGTTLVGLLKEFSS T DV
Sbjct: 152 SLLHISATSSD*ASARSNEEKEWAASVTCICSAALCN*LVTGTTLVGLLKEFSSFTLLDV 331
Query: 364 RTVAVDPRALILAWSPLVEIVRVTASDPKFMTFTLRKLFSESCQVIADAASEPE*LELIV 543
RTVA DP AL+LAWSP EIVR+T SDPKF FTLRKLF ESCQVIADAA EPE*LELIV
Sbjct: 332 RTVAFDPSALMLAWSPDTEIVRLTVSDPKFTIFTLRKLFPESCQVIADAAREPE*LELIV 511
Query: 544 VGWNIAPLDSRKSVC 588
+G +APLDSRK+ C
Sbjct: 512 IG*IMAPLDSRKNFC 556
Score = 224 bits (483), Expect = 5e-058
Identities = 101/134 (75%), Positives = 109/134 (81%)
Frame = -3 / -1
Query: 590 MQTLFRESSGAMFHPTTIXXXXXXXXXXXAITWQDSENSFLRVKVINFGSDAVTLTISTS 411
MQ FRESSGAM HP TI AITWQDS N+FLRVK++NFGSD V+LTIS S
Sbjct: 558 MQKFFRESSGAMIHPITISSSYSGSLAASAITWQDSGNNFLRVKIVNFGSDTVSLTISVS 379
Query: 410 GLQASINALGSTATVLTSADVMDENSFSNPTKVVPVKSDLSNAAEQMQVTLAPRSFSSFD 231
GLQASINALGS ATVLTS++V DENSFSNPTKVVPV S L NAAEQMQVTLA SFSSFD
Sbjct: 378 GLQASINALGSNATVLTSSNVKDENSFSNPTKVVPVTSQLHNAAEQMQVTLAAHSFSSFD 199
Query: 230 LALAQSKLVAEM*A 189
LALAQS+LVAEM*+
Sbjct: 198 LALAQSELVAEM*S 157
Score = 166 bits (356), Expect = 2e-040
Identities = 71/134 (52%), Positives = 89/134 (66%)
Frame = +3 / +1
Query: 189 SSHLRYKLGLSQGEIERAEGARSQRDLHLLCSIAQIALYRHNLGWVAEGVFIHHIC*CEN 368
+SHL KLGLS+ ++ER EG S+RDLHL + Q+ + H+LGWV E +FI +I EN
Sbjct: 157 ASHLCDKLGLSKRKVERGEGVGSERDLHLFRGVMQLTCHGHDLGWVTERIFILYIAGREN 336
Query: 369 SGG*SQSVDTGLEPTCGDCQGHSI*PEVYDLYS*EAVLGVLPGNRRRCK*T*VAGADCRW 548
S * Q VD LEP DC+ H + PEV++LYS E + G+LPG+ R C T VAG DC W
Sbjct: 337 SSV*PQRVDASLEPGHRDCEAHGVRPEVHNLYSQEVIPGILPGDSRCC*RTRVAGTDCNW 516
Query: 549 MEHSTTRLAEKRLH 590
M H TTR AEK LH
Sbjct: 517 MNHGTTRFAEKLLH 558
Score = 122 bits (261), Expect(2) = 4e-031
Identities = 52/94 (55%), Positives = 67/94 (71%)
Frame = -2 / -3
Query: 588 ADAFPRV*WCYVPSNDNQLQLLRFTCSVCDYLAGLREQLPKSKGHKLRVRCCDPDNLHKW 409
A+ FPR+*WC+ SN NQ QLL F+ S+C +LAG RE LP+SK +LRV +P NL
Sbjct: 556 AEVFPRI*WCHDSSNYNQFQLLWFSSSICYHLAGFRE*LPESKDCELRVGHREPHNLCVR 377
Query: 408 APGQYQRSGINRHCSHISRCDG*KLLQQPNQGCA 307
APG +QR+G+ R+CSH+ +C G*K Q PNQG A
Sbjct: 376 APG*HQRAGVKRYCSHVQQCKG*KFFQ*PNQGRA 275
Score = 122 bits (260), Expect = 3e-027
Identities = 71/132 (53%), Positives = 82/132 (62%)
Frame = +2 / +3
Query: 194 TSPLQAWTEPGRDRTS*RSEEPA*PASALQHCSDRSLPAQPWLGC*RSFHPSHLLM*EQW 373
TS QA TE + RT RS + A*PAS + + A+PWLG *++FHP H *EQ
Sbjct: 162 TSLRQARTEQAQGRTRRRSGQRA*PASVPRRYATDLSRARPWLGY*KNFHPLHCWT*EQ* 341
Query: 374 RLIPER*YWPGAHLWRLSGSQHLTRSL*PLLLGSCSRSPAR*SQTLQVNLSSWS*LSLDG 553
RL P R* PGA RL GS+ TRS LL GS SR+PAR* Q L N SSW+*L LD
Sbjct: 342 RLTPAR*C*PGARTQRL*GSRCPTRSSQSLLSGSYSRNPAR**QMLLENQSSWN*L*LDE 521
Query: 554 T*HH*TRGKASA 589
+ HH* RGK SA
Sbjct: 522 SWHH*IRGKTSA 557
Score = 122 bits (260), Expect = 3e-027
Identities = 73/133 (54%), Positives = 79/133 (59%)
Frame = -1 / -2
Query: 589 CRRFSASLVVLCSIQRQSAPATQVHLQRLRLPGRTPRTAS*E*RS*TSGQML*P*QSPQV 410
CR FSA+LVV IQ QS PAT V Q L PGR P S*E*R *TSG+ * QS
Sbjct: 557 CRSFSANLVVP*FIQLQSVPATLVL*QHLLSPGRIPGITS*E*RL*TSGRTP*ASQSLCP 378
Query: 409 GSRPVSTLWDQPPLFSHQQM*WMKTPSATQPRLCR*RAI*AMLQSRCRSRWLLAPSARSI 230
GSR ST W Q LFS M* MK S TQPR C *+ ++RCRSR L PS RS
Sbjct: 377 GSRLASTRWGQTLLFSRPAM*RMKILSVTQPRSCP*QVSCITPRNRCRSRSLPTPSPRST 198
Query: 229 SPWLSPSL*RRCE 191
LSPSL +RCE
Sbjct: 197 LRLLSPSLSQRCE 159
Score = 32.2 bits (64), Expect(2) = 4e-031
Identities = 16/27 (59%), Positives = 17/27 (62%)
Frame = -2 / -3
Query: 273 DAGHAGSSLLQLVRSRPGSVQACSGDV 193
DAGHA LL LVR SV+AC DV
Sbjct: 241 DAGHARCPLLLLVRPCACSVRACRRDV 161
>gb|BU981962.1|BU981962 HA25B23r HA Hordeum vulgare subsp. vulgare cDNA clone HA25B23
5-PRIME, mRNA sequence
Length = 558
Score = 216 bits (467), Expect = 8e-056
Identities = 89/146 (60%), Positives = 106/146 (72%)
Frame = -3 / +1
Query: 653 RWNPDAIVFNSWQHYGTPSYWMQTLFRESSGAMFHPTTIXXXXXXXXXXXAITWQDSENS 474
R PDAIVFNSWQ YGTPSYWMQT FRESSGA+ HP + AITW D+E+
Sbjct: 1 RTRPDAIVFNSWQQYGTPSYWMQTFFRESSGAVIHPMRLNSSYSGSLAASAITWGDNEDI 180
Query: 473 FLRVKVINFGSDAVTLTISTSGLQASINALGSTATVLTSADVMDENSFSNPTKVVPVKSD 294
FLR+K++NFGS+AV LT+S GLQA +N S TVLTS +V+DEN+F +P VVP +SD
Sbjct: 181 FLRIKIVNFGSNAVNLTLSAIGLQAGVNTSRSAVTVLTSDNVLDENTFDDPRNVVPERSD 360
Query: 293 LSNAAEQMQVTLAPRSFSSFDLALAQ 216
L NAAE+MQ L P SF+SFDLAL Q
Sbjct: 361 LPNAAEEMQAMLVPHSFTSFDLALDQ 438
Score = 198 bits (427), Expect = 3e-050
Identities = 95/143 (66%), Positives = 108/143 (75%)
Frame = +1 / -2
Query: 217 *ARARSNELKERGASVTCICSAALLRSLFTGTTLVGLLKEFSSITSADVRTVAVDPRALI 396
*+RARSNE+KE G S+ CI SAAL RSL +GTTL G FSS T +DVRTV + L
Sbjct: 437 *SRARSNEVKE*GTSMACISSAALGRSLLSGTTLRGSSNVFSSNTLSDVRTVTAERDVLT 258
Query: 397 LAWSPLVEIVRVTASDPKFMTFTLRKLFSESCQVIADAASEPE*LELIVVGWNIAPLDSR 576
A SP+ + VR TA DPKF F LRK+ S S QVIADAA+EPE*LEL ++GW APLDSR
Sbjct: 257 PACSPIADKVRFTAFDPKFTIFILRKISSLSPQVIADAANEPE*LELSLIGWITAPLDSR 78
Query: 577 KSVCIQ*LGVP*CCQELKTIASG 645
K+VCIQ*LGVP CCQELKTIASG
Sbjct: 77 KNVCIQ*LGVPYCCQELKTIASG 9
Score = 155 bits (333), Expect = 3e-037
Identities = 70/146 (47%), Positives = 93/146 (63%)
Frame = +3 / -1
Query: 216 LSQGEIERAEGARSQRDLHLLCSIAQIALYRHNLGWVAEGVFIHHIC*CENSGG*SQSVD 395
L Q +I+ +E R++ LHL CSI + + HN+ WV E V I HI CEN *+ +D
Sbjct: 438 LIQSQIK*SERVRNKHGLHLFCSIG*VTSFWHNVTWVIERVLIQHIVGCENGDS*A*RID 259
Query: 396 TGLEPTCGDCQGHSI*PEVYDLYS*EAVLGVLPGNRRRCK*T*VAGADCRWMEHSTTRLA 575
T L+ C + HSI*P+V++LY E +L V PGN R C+*T VAG + M+HSTT
Sbjct: 258 TSLQSDCR*GEVHSI*PKVHNLYPQEDILIVSPGNCRCCQ*TRVAGIESHRMDHSTT*FT 79
Query: 576 EKRLHPVTGSAVMLPGVEDDCVWVPP 653
EK LHPV S+++LPGVED C+W P
Sbjct: 78 EKCLHPVARSSILLPGVEDYCIWPRP 1
Score = 113 bits (241), Expect = 1e-024
Identities = 56/132 (42%), Positives = 75/132 (56%)
Frame = -2 / +3
Query: 606 HSQLLDADAFPRV*WCYVPSNDNQLQLLRFTCSVCDYLAGLREQLPKSKGHKLRVRCCDP 427
+S LLDAD FP + WC PS + Q QLL F S+C+YL LP+ K +L V+CC+P
Sbjct: 48 NS*LLDADIFP*IKWCCDPSYETQFQLLWFIGSICNYLGRQ*GYLPEDKDCELWVKCCEP 227
Query: 426 DNLHKWAPGQYQRSGINRHCSHISRCDG*KLLQQPNQGCAGKERSEQCCRADAGHAGSSL 247
+ Q ++ H SHI +C G*+ ++ P CA K+ QCCR DA HA SSL
Sbjct: 228 HLICNRTASWCQYVTLSCHRSHIRQCVG*EHVR*PT*RCARKK*PTQCCRRDASHACSSL 407
Query: 246 LQLVRSRPGSVQ 211
+ S GSV+
Sbjct: 408 FHFI*SGSGSVR 443
Score = 101 bits (215), Expect = 5e-021
Identities = 61/130 (46%), Positives = 69/130 (53%)
Frame = -1 / +2
Query: 604 LPVTGCRRFSASLVVLCSIQRQSAPATQVHLQRLRLPGRTPRTAS*E*RS*TSGQML*P* 425
L TGCR FS + VVL SI S PAT VH Q L+LPG T R +S* *R *T GQML*
Sbjct: 50 LLATGCRHFSVNQVVL*SIL*DSIPATLVHWQHLQLPGETMRISS*G*RL*TLGQML*TS 229
Query: 424 QSPQVGSRPVSTLWDQPPLFSHQQM*WMKTPSATQPRLCR*RAI*AMLQSRCRSRWLLAP 245
Q + VS Q FSH M WM+T S T LC+ MLQ RC+ L
Sbjct: 230 PYLQSDCKLVSIRHAQLSPFSHPTMCWMRTRSMTHVTLCQKEVTYPMLQKRCKPCLFLTL 409
Query: 244 SARSISPWLS 215
S I W+S
Sbjct: 410 SLHLIWLWIS 439
>gb|BI948632.1|BI948632 HVSMEl0010F06f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0010F06f, mRNA sequence
Length = 817
Score = 160 bits (345), Expect(3) = 8e-054
Identities = 71/91 (78%), Positives = 78/91 (85%)
Frame = +1 / -3
Query: 382 PRALILAWSPLVEIVRVTASDPKFMTFTLRKLFSESCQVIADAASEPE*LELIVVGWNIA 561
P L+LA SP EIVR+T SDPKF +FTLRKLF ESCQVIADAA EPE*LELIV+G +A
Sbjct: 575 PARLMLAGSPDTEIVRLTVSDPKFTSFTLRKLFPESCQVIADAAREPE*LELIVIG*IMA 396
Query: 562 PLDSRKSVCIQ*LGVP*CCQELKTIASGFHL 654
PLDSRK+ CIQ*LGVP CCQELKTIASGFH+
Sbjct: 395 PLDSRKNFCIQ*LGVPYCCQELKTIASGFHV 303
Score = 155 bits (332), Expect(4) = 8e-054
Identities = 63/90 (70%), Positives = 66/90 (73%)
Frame = -3 / +1
Query: 650 WNPDAIVFNSWQHYGTPSYWMQTLFRESSGAMFHPTTIXXXXXXXXXXXAITWQDSENSF 471
WNPDAIVFNSWQ YGTPSYWMQ FRESSGAM HP TI AITWQDS N+F
Sbjct: 307 WNPDAIVFNSWQQYGTPSYWMQKFFRESSGAMIHPITISSSYSGSLAASAITWQDSGNNF 486
Query: 470 LRVKVINFGSDAVTLTISTSGLQASINALG 381
LRVK +NFGSD V+LTIS SGL ASI G
Sbjct: 487 LRVKDVNFGSDTVSLTISVSGLPASIKRAG 576
Score = 130 bits (279), Expect(3) = 5e-042
Identities = 52/95 (54%), Positives = 65/95 (68%)
Frame = +3 / -2
Query: 393 DTGLEPTCGDCQGHSI*PEVYDLYS*EAVLGVLPGNRRRCK*T*VAGADCRWMEHSTTRL 572
D EP DC+ H + PEV+ LYS E + G+LPG+ R C T VAG DC WM H TTR
Sbjct: 564 DASWEPGHRDCEAHGVRPEVHILYSQEVIPGILPGDSRCC*RTRVAGTDCNWMNHGTTRF 385
Query: 573 AEKRLHPVTGSAVMLPGVEDDCVWVPPILLQSSKE 677
AEK LHPVT S+V+LPGVEDD +W+P +++ KE
Sbjct: 384 AEKLLHPVTRSSVLLPGVEDDSIWIPRLIVVVYKE 280
Score = 87.2 bits (184), Expect(3) = 1e-032
Identities = 40/72 (55%), Positives = 51/72 (70%)
Frame = -2 / +3
Query: 606 HSQLLDADAFPRV*WCYVPSNDNQLQLLRFTCSVCDYLAGLREQLPKSKGHKLRVRCCDP 427
+S LLDA+ FPR+*WC+ SN NQ QLL F+ S+C +LAG RE LP+SKG +LRV +P
Sbjct: 351 NS*LLDAEVFPRI*WCHDSSNYNQFQLLWFSSSICYHLAGFRE*LPESKGCELRVGHREP 530
Query: 426 DNLHKWAPGQYQ 391
NL AP +Q
Sbjct: 531 HNLCVRAPS*HQ 566
Score = 56.5 bits (117), Expect(3) = 8e-054
Identities = 25/29 (86%), Positives = 26/29 (89%)
Frame = +1 / -3
Query: 652 LFFSSPVRKAASANEARRLPLPASPLQTA 738
LFFSSPVRKAASA+E RRLPLPAS L TA
Sbjct: 248 LFFSSPVRKAASASEPRRLPLPASVLHTA 162
Score = 51.5 bits (106), Expect(4) = 8e-054
Identities = 19/25 (76%), Positives = 22/25 (88%)
Frame = -1 / +2
Query: 730 GEVMQVEEVFLLHWQKLLSLLDWRR 656
GE+MQVEE FL+HWQ+L SLL WRR
Sbjct: 170 GELMQVEEAFLVHWQRLPSLLGWRR 244
Score = 48.3 bits (99), Expect(3) = 1e-032
Identities = 18/26 (69%), Positives = 19/26 (73%)
Frame = -2 / +3
Query: 732 LER*CR*RKSSCFIGRSCFPYWTGEE 655
+E *CR*RK S F GR C PYW GEE
Sbjct: 168 VEN*CR*RKPSWFTGRGCLPYWAGEE 245
Score = 42.3 bits (86), Expect(3) = 1e-032
Identities = 19/35 (54%), Positives = 21/35 (60%)
Frame = -3 / +2
Query: 410 GLQASINALGSTATVLTSADVMDENSFSNPTKVVP 306
G Q + NALGS AT LT V DEN FS P + P
Sbjct: 548 GSQLASNALGSNATGLTXQHVKDENFFSTPPRACP 652
Score = 40.5 bits (82), Expect(3) = 5e-042
Identities = 18/35 (51%), Positives = 21/35 (60%)
Frame = +1 / -2
Query: 307 GTTLVGLLKEFSSITSADVRTVAVDPRALILAWSP 411
G L G+LK+FSS T VR VA DP A +W P
Sbjct: 651 GHALGGVLKKFSSFTCWXVRPVAFDPSAFDASWEP 547
Score = 38.6 bits (78), Expect(4) = 8e-054
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -2 / +1
Query: 405 PGQYQRSGINRHCSHISRCDG*KLLQQPNQG 313
P +R+G+ R+ SH+ C G*+ Q P QG
Sbjct: 553 PASIKRAGVKRYWSHVPACKG*EFFQYPTQG 645
Score = 38.2 bits (77), Expect(3) = 5e-042
Identities = 15/23 (65%), Positives = 17/23 (73%)
Frame = +2 / -1
Query: 662 PVQ*GKQLLPMKQEDFLYLHHLS 730
P Q*G+Q LP+ QE FLYLH S
Sbjct: 238 PAQ*GRQPLPVNQEGFLYLHQFS 170
Score = 31.8 bits (63), Expect(3) = 8e-054
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +2 / -3
Query: 314 PWLGC*RSFHPSHLLM*EQWRLIPER 391
PW+G *++ HP H *+Q RL P R
Sbjct: 644 PWVGY*KNSHPLHAGT*DQ*RLTPAR 567
Score = 22.1 bits (42), Expect(4) = 8e-054
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = -3 / +1
Query: 332 FSNPTKVVPVKSDLSNAAEQMQVTLA 255
F PT+ VPV S L A + LA
Sbjct: 625 FQYPTQGVPVTSQLLTARNKAGTLLA 702
>gb|BI776606.2|BI776606 EBpi07_SQ001_B24_R pistil, 12 DPA, no treatment, cv Optic, EBpi07
Hordeum vulgare subsp. vulgare cDNA clone
EBpi07_SQ001_B24 5', mRNA sequence
Length = 453
Score = 204 bits (440), Expect = 4e-052
Identities = 82/137 (59%), Positives = 98/137 (71%)
Frame = -3 / +2
Query: 653 RWNPDAIVFNSWQHYGTPSYWMQTLFRESSGAMFHPTTIXXXXXXXXXXXAITWQDSENS 474
+W PDAIVFNSWQ YGTPSYWM T FRESSGA+ HP + AITW DSE+
Sbjct: 41 QWTPDAIVFNSWQQYGTPSYWMHTFFRESSGAVIHPMRLNSSYSGSLAASAITWGDSEDI 220
Query: 473 FLRVKVINFGSDAVTLTISTSGLQASINALGSTATVLTSADVMDENSFSNPTKVVPVKSD 294
FLR+K++NFGS+AV LT+S GLQA +N S TVLTS +V+DEN+F +P VVP +SD
Sbjct: 221 FLRIKIVNFGSNAVNLTLSAIGLQAGVNT*RSAVTVLTSDNVLDENTFDDPRNVVPERSD 400
Query: 293 LSNAAEQMQVTLAPRSF 243
L NAAE+MQ L P SF
Sbjct: 401 LPNAAEEMQAMLVPHSF 451
Score = 188 bits (405), Expect = 3e-047
Identities = 89/137 (64%), Positives = 101/137 (73%)
Frame = +1 / -1
Query: 241 LKERGASVTCICSAALLRSLFTGTTLVGLLKEFSSITSADVRTVAVDPRALILAWSPLVE 420
+KE G S+ CI SAAL RSL +GTTL G FSS T +DVRTV + L A SP+ +
Sbjct: 453 VKE*GTSMACISSAALGRSLLSGTTLRGSSNVFSSNTLSDVRTVTAERHVLTPACSPIAD 274
Query: 421 IVRVTASDPKFMTFTLRKLFSESCQVIADAASEPE*LELIVVGWNIAPLDSRKSVCIQ*L 600
VR TA DPKF F LRK+ S S QVIADAA+EPE*LEL ++GW APLDSRK+VCIQ*L
Sbjct: 273 KVRFTAFDPKFTIFILRKISSLSPQVIADAANEPE*LELSLIGWITAPLDSRKNVCIQ*L 94
Query: 601 GVP*CCQELKTIASGFH 651
GVP CCQELKTIASG H
Sbjct: 93 GVPYCCQELKTIASGVH 43
Score = 154 bits (331), Expect = 5e-037
Identities = 67/136 (49%), Positives = 88/136 (64%)
Frame = +3 / -3
Query: 243 EGARSQRDLHLLCSIAQIALYRHNLGWVAEGVFIHHIC*CENSGG*SQSVDTGLEPTCGD 422
E R++ LHL CSI +A + HN+ WV E V I HI CEN *+ +DT L+ C
Sbjct: 451 ERVRNKHGLHLFCSIG*VASFWHNVTWVIERVLIQHIVGCENGDS*ASRIDTSLQSDCR* 272
Query: 423 CQGHSI*PEVYDLYS*EAVLGVLPGNRRRCK*T*VAGADCRWMEHSTTRLAEKRLHPVTG 602
+ HSI*P+V++LY E +L V PGN R C+*T VAG + M+HSTT EK +HPV
Sbjct: 271 GEVHSI*PKVHNLYPQEDILTVSPGNCRCCQ*TRVAGIESHRMDHSTT*FTEKCMHPVAR 92
Query: 603 SAVMLPGVEDDCVWVP 650
S+++LPGVED C+W P
Sbjct: 91 SSILLPGVEDYCIWGP 44
Score = 107 bits (228), Expect = 8e-023
Identities = 54/135 (40%), Positives = 72/135 (53%)
Frame = -2 / +1
Query: 651 VEPXXXXXXXXXXXRHSQLLDADAFPRV*WCYVPSNDNQLQLLRFTCSVCDYLAGLREQL 472
V+P +S LLDA FP + WC PS + Q QLL F S+C+YL L
Sbjct: 43 VDPRCNSLQLLATVWNS*LLDAYIFP*IKWCCDPSYETQFQLLWFIGSICNYLGRQ*GYL 222
Query: 471 PKSKGHKLRVRCCDPDNLHKWAPGQYQRSGINRHCSHISRCDG*KLLQQPNQGCAGKERS 292
P+ K +L V+CC+P + Q ++ H SHI +C G*+ ++ P CA K+R
Sbjct: 223 PEDKDCELWVKCCEPHLICNRTASWCQYVTLSCHRSHIRQCVG*EHVR*PT*RCARKKRP 402
Query: 291 EQCCRADAGHAGSSL 247
QCCR DA HA SSL
Sbjct: 403 TQCCRRDASHACSSL 447
>gb|BF631424.2|BF631424 HVSMEb0015O10f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0015O10f, mRNA sequence
Length = 762
Score = 194 bits (419), Expect = 4e-049
Identities = 85/147 (57%), Positives = 98/147 (66%)
Frame = -3 / +2
Query: 650 WNPDAIVFNSWQHYGTPSYWMQTLFRESSGAMFHPTTIXXXXXXXXXXXAITWQDSENSF 471
WNPDA+VFNSWQ YGTPSYWMQ FRESSGAM HP I A+TWQDS N+
Sbjct: 110 WNPDAVVFNSWQQYGTPSYWMQKFFRESSGAMIHPIAISSSYSGSLTASAVTWQDSGNN* 289
Query: 470 LRVKVINFGSDAVTLTISTSGLQASINALGSTATVLTSADVMDENSFSNPTKVVPVKSDL 291
LRVK+ N GSD +LTI +GLQ INALGS ATVLT DENS +PTK +P S +
Sbjct: 290 LRVKIEN*GSDTESLTICVTGLQTDINALGSNATVLTCNSEEDENSLKDPTKDMPGTSQV 469
Query: 290 SNAAEQMQVTLAPRSFSSFDLALAQSK 210
+A +QM VTLA SF +L LAQ +
Sbjct: 470 HSARKQMHVTLATHSFC*KNLRLAQEQ 550
Score = 186 bits (401), Expect = 1e-046
Identities = 87/137 (63%), Positives = 98/137 (71%)
Frame = +1 / -1
Query: 244 KERGASVTCICSAALLRSLFTGTTLVGLLKEFSSITSADVRTVAVDPRALILAWSPLVEI 423
KE ASVTCIC AL L G +LVG K FSS + V TVA DP AL+ WSP+ +I
Sbjct: 516 KEWVASVTCICFLALCT*LVPGMSLVGSFKLFSSSSLLHVSTVAFDPSALMSVWSPVTQI 337
Query: 424 VRVTASDPKFMTFTLRKLFSESCQVIADAASEPE*LELIVVGWNIAPLDSRKSVCIQ*LG 603
VR++ SDP F FTL LF ESCQV ADA EPE*LELI +G +APLDSRK+ CIQ*LG
Sbjct: 336 VRLSVSDP*FSIFTLS*LFPESCQVTADAVREPE*LELIAIG*IMAPLDSRKNFCIQ*LG 157
Query: 604 VP*CCQELKTIASGFHL 654
VP CCQELKT ASGFH+
Sbjct: 156 VPYCCQELKTTASGFHV 106
Score = 159 bits (342), Expect = 1e-038
Identities = 72/158 (45%), Positives = 93/158 (58%)
Frame = +3 / -3
Query: 189 SSHLRYKLGLSQGEIERAEGARSQRDLHLLCSIAQIALYRHNLGWVAEGVFIHHIC*CEN 368
SS L L + ++ AEG S+RD+HL + H GWV + +FI CE
Sbjct: 571 SSIFLLSLLLCKPKVLLAEGVGSERDMHLFSGAMYLTCPGHVFGWVFQTIFILFTVACEY 392
Query: 369 SGG*SQSVDTGLEPTCGDCQGHSI*PEVYDLYS*EAVLGVLPGNRRRCK*T*VAGADCRW 548
S * Q VD LEP DC+ + P V +LYS + G+LPG+ R C T VAG DC W
Sbjct: 391 SSV*PQCVDVSLEPGHTDCEALGVRPLVLNLYSQLVIPGILPGDSRCC*RTRVAGTDCNW 212
Query: 549 MEHSTTRLAEKRLHPVTGSAVMLPGVEDDCVWVPPILL 662
M H TTR AEK LHPVT S+V+LPGVEDD +W+P +++
Sbjct: 211 MNHGTTRFAEKLLHPVTRSSVLLPGVEDDSIWIPRLIV 98
Score = 108 bits (231), Expect = 3e-023
Identities = 56/123 (45%), Positives = 77/123 (62%)
Frame = -2 / +1
Query: 606 HSQLLDADAFPRV*WCYVPSNDNQLQLLRFTCSVCDYLAGLREQLPKSKGHKLRVRCCDP 427
+S LLDA FPR+*WC+ SN NQ QLL F+ S+C +LAG RE L +SK +L V +P
Sbjct: 154 NS*LLDAKVFPRI*WCHDSSNCNQFQLLWFSNSICCHLAGFRE*LAESKD*ELGVGHREP 333
Query: 426 DNLHKWAPGQYQRSGINRHCSHISRCDG*KLLQQPNQGCAGKERSEQCCRADAGHAGSSL 247
NL AP +QR+G+ R+C+H+ + G*K ++PNQ A + S + +A HA L
Sbjct: 334 HNLCDRAPD*HQRTGVKRYCTHMQQ*RG*K*FERPNQRHARDKSST*RQKTNACHARYPL 513
Query: 246 LQL 238
L L
Sbjct: 514 LLL 522
>gb|BU971681.1|BU971681 HB19F12r BC Hordeum vulgare subsp. vulgare cDNA clone HB19F12
5-PRIME, mRNA sequence
Length = 556
Score = 193 bits (415), Expect = 1e-048
Identities = 86/104 (82%), Positives = 94/104 (90%)
Frame = -3 / +2
Query: 500 ITWQDSENSFLRVKVINFGSDAVTLTISTSGLQASINALGSTATVLTSADVMDENSFSNP 321
ITWQDS N+FLRVK++NFGSD V+LTIS SGLQASINALGS ATVLTS++V DENSFSNP
Sbjct: 62 ITWQDSGNNFLRVKIVNFGSDTVSLTISVSGLQASINALGSNATVLTSSNVKDENSFSNP 241
Query: 320 TKVVPVKSDLSNAAEQMQVTLAPRSFSSFDLALAQSKLVAEM*A 189
TKVVPV S L NAAEQMQVTLA SFSSFDLALAQS+LVAEM*+
Sbjct: 242 TKVVPVTSQLHNAAEQMQVTLAAHSFSSFDLALAQSELVAEM*S 373
Score = 188 bits (406), Expect = 2e-047
Identities = 90/118 (76%), Positives = 92/118 (77%)
Frame = +1 / -2
Query: 184 SLAHISATSLD*ARARSNELKERGASVTCICSAALLRSLFTGTTLVGLLKEFSSITSADV 363
SL HISATS D*A ARSNE KE ASVTCICSAAL L TGTTLVGLLKEFSS T DV
Sbjct: 378 SLLHISATSSD*ASARSNEEKEWAASVTCICSAALCN*LVTGTTLVGLLKEFSSFTLLDV 199
Query: 364 RTVAVDPRALILAWSPLVEIVRVTASDPKFMTFTLRKLFSESCQVIADAASEPE*LEL 537
RTVA DP AL+LAWSP EIVR+T SDPKF FTLRKLF ESCQVIADAA P L L
Sbjct: 198 RTVAFDPSALMLAWSPDTEIVRLTVSDPKFTIFTLRKLFPESCQVIADAARVPATLVL 25
Score = 127 bits (271), Expect = 9e-029
Identities = 54/108 (50%), Positives = 72/108 (66%)
Frame = +3 / -1
Query: 189 SSHLRYKLGLSQGEIERAEGARSQRDLHLLCSIAQIALYRHNLGWVAEGVFIHHIC*CEN 368
+SHL KLGLS+ ++ER EG S+RDLHL + Q+ + H+LGWV E +FI +I EN
Sbjct: 373 ASHLCDKLGLSKRKVERGEGVGSERDLHLFRGVMQLTCHGHDLGWVTERIFILYIAGREN 194
Query: 369 SGG*SQSVDTGLEPTCGDCQGHSI*PEVYDLYS*EAVLGVLPGNRRRC 512
S * Q VD LEP DC+ H + PEV++LYS E + G+LPG+ R C
Sbjct: 193 SSV*PQRVDASLEPGHRDCEAHGVRPEVHNLYSQEVIPGILPGDSRCC 50
>gb|BF259719.2|BF259719 HVSMEf0020B07f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0020B07f, mRNA sequence
Length = 832
Score = 122 bits (262), Expect(3) = 4e-048
Identities = 53/70 (75%), Positives = 59/70 (84%)
Frame = +1 / -2
Query: 445 PKFMTFTLRKLFSESCQVIADAASEPE*LELIVVGWNIAPLDSRKSVCIQ*LGVP*CCQE 624
PK F LRKLF +SCQVIA+ A EPE*LELIV+G +APLDSRK+ CIQ*LGVP CCQE
Sbjct: 576 PKVPIFILRKLFPDSCQVIAEVAKEPE*LELIVIG*IMAPLDSRKNFCIQ*LGVPYCCQE 397
Query: 625 LKTIASGFHL 654
LKTIASGFH+
Sbjct: 396 LKTIASGFHV 367
Score = 118 bits (252), Expect(3) = 8e-046
Identities = 45/69 (65%), Positives = 49/69 (71%)
Frame = -3 / +2
Query: 650 WNPDAIVFNSWQHYGTPSYWMQTLFRESSGAMFHPTTIXXXXXXXXXXXAITWQDSENSF 471
WNPDAIVFNSWQ YGTPSYWMQ FRES GAM HP TI AITWQ+S N+F
Sbjct: 371 WNPDAIVFNSWQQYGTPSYWMQKFFRESRGAMIHPITISSSYSGSLATSAITWQESGNNF 550
Query: 470 LRVKVINFG 444
LR+K+ FG
Sbjct: 551 LRIKMGTFG 577
Score = 102 bits (217), Expect(2) = 6e-027
Identities = 41/73 (56%), Positives = 50/73 (68%)
Frame = +3 / -1
Query: 459 LYS*EAVLGVLPGNRRRCK*T*VAGADCRWMEHSTTRLAEKRLHPVTGSAVMLPGVEDDC 638
LYS E + G LPG+ R C T VAG DC WM H R AEK LHPVT S+V+LPGVEDD
Sbjct: 562 LYSQEVIPGFLPGDSRSC*RTRVAGTDCNWMNHGPPRFAEKLLHPVTRSSVLLPGVEDDS 383
Query: 639 VWVPPILLQSSKE 677
+W+P +++ KE
Sbjct: 382 IWIPRLIVVVYKE 344
Score = 56.5 bits (117), Expect(3) = 4e-048
Identities = 25/29 (86%), Positives = 26/29 (89%)
Frame = +1 / -2
Query: 652 LFFSSPVRKAASANEARRLPLPASPLQTA 738
LFFSSPVRKAASA+E RRLPLPAS L TA
Sbjct: 312 LFFSSPVRKAASASEPRRLPLPASVLHTA 226
Score = 52.8 bits (109), Expect(3) = 8e-046
Identities = 19/26 (73%), Positives = 23/26 (88%)
Frame = -1 / +3
Query: 733 FGEVMQVEEVFLLHWQKLLSLLDWRR 656
+GE+MQVEE FL+HWQ+L SLL WRR
Sbjct: 231 YGELMQVEEAFLVHWQRLPSLLGWRR 308
Score = 51.0 bits (105), Expect(3) = 8e-046
Identities = 25/41 (60%), Positives = 26/41 (63%)
Frame = -3 / +2
Query: 422 ISTSGLQASINALGSTATVLTSADVMDENSFSNPTKVVPVK 300
I SGLQASINALG T L S V EN F NPT+V P K
Sbjct: 596 IFVSGLQASINALGFNPTGLKSPHVKGENFFLNPTQVCPYK 718
Score = 50.6 bits (104), Expect(3) = 4e-048
Identities = 21/35 (60%), Positives = 25/35 (71%)
Frame = +1 / -2
Query: 307 GTTLVGLLKEFSSITSADVRTVAVDPRALILAWSP 411
G T VGL K+FS T D R V ++PRAL+LAWSP
Sbjct: 711 GHTWVGLRKKFSPFTCGDFRPVGLNPRALMLAWSP 607
Score = 38.2 bits (77), Expect(2) = 6e-027
Identities = 15/23 (65%), Positives = 17/23 (73%)
Frame = +2 / -3
Query: 662 PVQ*GKQLLPMKQEDFLYLHHLS 730
P Q*G+Q LP+ QE FLYLH S
Sbjct: 302 PAQ*GRQPLPVNQEGFLYLHQFS 234
>gb|CA028489.1|CA028489 HZ62C12r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ62C12
5-PRIME, mRNA sequence
Length = 557
Score = 149 bits (320), Expect(2) = 1e-038
Identities = 58/97 (59%), Positives = 69/97 (71%)
Frame = -3 / +1
Query: 653 RWNPDAIVFNSWQHYGTPSYWMQTLFRESSGAMFHPTTIXXXXXXXXXXXAITWQDSENS 474
+W PDAIVFNSWQ YGTPSYWMQT FRESSGA+ HP + AITW D+E+
Sbjct: 265 QWTPDAIVFNSWQQYGTPSYWMQTFFRESSGAVIHPMRLNSSYSGSLAASAITWGDNEDI 444
Query: 473 FLRVKVINFGSDAVTLTISTSGLQASINALGSTATVL 363
FLR+K++NFGS+AV LT+S GLQA +N S TVL
Sbjct: 445 FLRIKIVNFGSNAVNLTLSAIGLQAGVNTSRSAVTVL 555
Score = 144 bits (309), Expect(2) = 8e-041
Identities = 66/97 (68%), Positives = 74/97 (76%)
Frame = +1 / -1
Query: 361 VRTVAVDPRALILAWSPLVEIVRVTASDPKFMTFTLRKLFSESCQVIADAASEPE*LELI 540
VRTV + L A SP+ + VR TA DPKF F LRK+ S S QVIADAA+EPE*LEL
Sbjct: 557 VRTVTAERDVLTPACSPIADKVRFTAFDPKFTIFILRKISSLSPQVIADAANEPE*LELS 378
Query: 541 VVGWNIAPLDSRKSVCIQ*LGVP*CCQELKTIASGFH 651
++GW APLDSRK+VCIQ*LGVP CCQELKTIASG H
Sbjct: 377 LIGWITAPLDSRKNVCIQ*LGVPYCCQELKTIASGVH 267
Score = 108 bits (230), Expect(2) = 3e-025
Identities = 49/96 (51%), Positives = 64/96 (66%)
Frame = +3 / -3
Query: 363 ENSGG*SQSVDTGLEPTCGDCQGHSI*PEVYDLYS*EAVLGVLPGNRRRCK*T*VAGADC 542
EN *+ +DT L+ C + HSI*P+V++LY E +L V PGN R C+*T VAG +
Sbjct: 555 ENGDS*A*RIDTSLQSDCR*GEVHSI*PKVHNLYPQEDILIVSPGNCRCCQ*TRVAGIES 376
Query: 543 RWMEHSTTRLAEKRLHPVTGSAVMLPGVEDDCVWVP 650
M+HSTT EK LHPV S+++LPGVED C+W P
Sbjct: 375 HRMDHSTT*FTEKCLHPVARSSILLPGVEDYCIWGP 268
Score = 42.8 bits (87), Expect(2) = 8e-041
Identities = 18/25 (72%), Positives = 21/25 (84%)
Frame = +1 / -1
Query: 652 LFFSSPVRKAASANEARRLPLPASP 726
LF S+P+R AASANEARR+PL SP
Sbjct: 209 LFTSNPMRNAASANEARRVPLLVSP 135
Score = 30.4 bits (60), Expect(2) = 1e-038
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = -2 / +3
Query: 702 SCFIGRSCFPYWTGEE* 652
S FIGRSC P+W E*
Sbjct: 159 SSFIGRSCIPHWIRSE* 209
Score = 26.7 bits (52), Expect(2) = 3e-025
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = +2 / -2
Query: 665 VQ*GKQLLPMKQEDF 709
+Q*G QLLPMK E F
Sbjct: 196 IQ*GMQLLPMKLEGF 152
>gb|BJ464212.1|BJ464212 BJ464212 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags33f17 5', mRNA sequence
Length = 591
Score = 123 bits (264), Expect(2) = 9e-039
Identities = 54/64 (84%), Positives = 58/64 (90%)
Frame = +1 / -2
Query: 463 TLRKLFSESCQVIADAASEPE*LELIVVGWNIAPLDSRKSVCIQ*LGVP*CCQELKTIAS 642
TLRKLF ESCQVIADAA EPE*LELIV+G +APLDSRK+ CIQ*LGVP CCQELKTIAS
Sbjct: 590 TLRKLFPESCQVIADAAREPE*LELIVIG*IMAPLDSRKNFCIQ*LGVPYCCQELKTIAS 411
Query: 643 GFHL 654
GFH+
Sbjct: 410 GFHV 399
Score = 116 bits (248), Expect(2) = 2e-035
Identities = 45/63 (71%), Positives = 46/63 (73%)
Frame = -3 / +1
Query: 650 WNPDAIVFNSWQHYGTPSYWMQTLFRESSGAMFHPTTIXXXXXXXXXXXAITWQDSENSF 471
WNPDAIVFNSWQ YGTPSYWMQ FRESSGAM HP TI AITWQDS N+F
Sbjct: 403 WNPDAIVFNSWQQYGTPSYWMQKFFRESSGAMIHPITISSSYSGSLAASAITWQDSGNNF 582
Query: 470 LRV 462
LRV
Sbjct: 583 LRV 591
Score = 106 bits (227), Expect(2) = 3e-028
Identities = 42/72 (58%), Positives = 52/72 (72%)
Frame = +3 / -1
Query: 462 YS*EAVLGVLPGNRRRCK*T*VAGADCRWMEHSTTRLAEKRLHPVTGSAVMLPGVEDDCV 641
YS E + G+LPG+ R C T VAG DC WM H TTR AEK LHPVT S+V+LPGVEDD +
Sbjct: 591 YSQEVIPGILPGDSRCC*RTRVAGTDCNWMNHGTTRFAEKLLHPVTRSSVLLPGVEDDSI 412
Query: 642 WVPPILLQSSKE 677
W+P +++ KE
Sbjct: 411 WIPRLIVVVYKE 376
Score = 56.5 bits (117), Expect(2) = 9e-039
Identities = 25/29 (86%), Positives = 26/29 (89%)
Frame = +1 / -2
Query: 652 LFFSSPVRKAASANEARRLPLPASPLQTA 738
LFFSSPVRKAASA+E RRLPLPAS L TA
Sbjct: 344 LFFSSPVRKAASASEPRRLPLPASVLHTA 258
Score = 52.8 bits (109), Expect(2) = 2e-035
Identities = 19/26 (73%), Positives = 23/26 (88%)
Frame = -1 / +2
Query: 733 FGEVMQVEEVFLLHWQKLLSLLDWRR 656
+GE+MQVEE FL+HWQ+L SLL WRR
Sbjct: 263 YGELMQVEEAFLVHWQRLPSLLGWRR 340
Score = 38.2 bits (77), Expect(2) = 3e-028
Identities = 15/23 (65%), Positives = 17/23 (73%)
Frame = +2 / -3
Query: 662 PVQ*GKQLLPMKQEDFLYLHHLS 730
P Q*G+Q LP+ QE FLYLH S
Sbjct: 334 PAQ*GRQPLPVNQEGFLYLHQFS 266
>gb|AL500477.1|AL500477 AL500477 Hordeum vulgare Barke etiolated leaves Hordeum vulgare
subsp. vulgare cDNA clone HK06M19r 3', mRNA sequence
Length = 514
Score = 153 bits (328), Expect(2) = 2e-037
Identities = 71/87 (81%), Positives = 76/87 (87%)
Frame = -3 / -3
Query: 449 FGSDAVTLTISTSGLQASINALGSTATVLTSADVMDENSFSNPTKVVPVKSDLSNAAEQM 270
FGSD V+LTI SGLQASINALGS ATVLTS++V DENSFSNPTKVVPV S L NAAEQM
Sbjct: 479 FGSDTVSLTIXVSGLQASINALGSNATVLTSSNVKDENSFSNPTKVVPVTSQLHNAAEQM 300
Query: 269 QVTLAPRSFSSFDLALAQSKLVAEM*A 189
QVTLA SFSS DLALAQS+LVAEM*+
Sbjct: 299 QVTLAAHSFSSXDLALAQSELVAEM*S 219
Score = 144 bits (308), Expect = 7e-034
Identities = 68/89 (76%), Positives = 70/89 (78%)
Frame = +1 / +1
Query: 184 SLAHISATSLD*ARARSNELKERGASVTCICSAALLRSLFTGTTLVGLLKEFSSITSADV 363
SL HISATS D*A ARSNE KE ASVTCICSAAL L TGTTLVGLLKEFSS T DV
Sbjct: 214 SLLHISATSSD*ASARSNEEKEWAASVTCICSAALCN*LVTGTTLVGLLKEFSSFTLLDV 393
Query: 364 RTVAVDPRALILAWSPLVEIVRVTASDPK 450
RTVA DP AL+LAWSP IVR+T SDPK
Sbjct: 394 RTVAFDPSALMLAWSPDTXIVRLTVSDPK 480
Score = 22.6 bits (43), Expect(2) = 2e-037
Identities = 7/10 (70%), Positives = 10/10 (100%)
Frame = -3 / -2
Query: 476 SFLRVKVINF 447
+FLRVK++NF
Sbjct: 507 TFLRVKIVNF 478
>gb|BF267850.2|BF267850 HV_CEa0019B08f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0019B08f, mRNA sequence
Length = 769
Score = 85.4 bits (180), Expect(3) = 1e-034
Identities = 34/61 (55%), Positives = 36/61 (59%)
Frame = -3 / +2
Query: 650 WNPDAIVFNSWQHYGTPSYWMQTLFRESSGAMFHPTTIXXXXXXXXXXXAITWQDSENSF 471
WN DAI N WQ YGTPS WM+ RESSGAM HP TI AITW DS N+
Sbjct: 371 WNTDAIRLNYWQRYGTPSTWMRRFLRESSGAMIHPITISFSYSGAVAAFAITWHDSGNNL 550
Query: 470 L 468
L
Sbjct: 551 L 553
Score = 83.5 bits (176), Expect(4) = 5e-036
Identities = 39/61 (63%), Positives = 49/61 (80%)
Frame = +1 / -2
Query: 472 KLFSESCQVIADAASEPE*LELIVVGWNIAPLDSRKSVCIQ*LGVP*CCQELKTIASGFH 651
KLF ESCQVIA+AA+ PE*L+L+V+G +APLDSR+++ IQ LGVP* CQ IAS FH
Sbjct: 549 KLFPESCQVIANAATAPE*LKLMVIG*IMAPLDSRRNLRIQVLGVP*RCQ*FNRIASVFH 370
Query: 652 L 654
+
Sbjct: 369 V 367
Score = 52.4 bits (108), Expect(4) = 5e-036
Identities = 23/29 (79%), Positives = 25/29 (86%)
Frame = +1 / -2
Query: 652 LFFSSPVRKAASANEARRLPLPASPLQTA 738
LF SSPVRK+ASA+E RRLPLPAS L TA
Sbjct: 312 LFLSSPVRKSASASEPRRLPLPASVLHTA 226
Score = 50.1 bits (103), Expect(3) = 1e-034
Identities = 18/26 (69%), Positives = 22/26 (84%)
Frame = -1 / +3
Query: 733 FGEVMQVEEVFLLHWQKLLSLLDWRR 656
+GE+MQVEE FL+HWQ+L SLL W R
Sbjct: 231 YGELMQVEEAFLVHWQRLTSLLGWIR 308
Score = 48.7 bits (100), Expect(3) = 1e-034
Identities = 22/34 (64%), Positives = 27/34 (79%)
Frame = -3 / +1
Query: 461 KVINFGSDAVTLTISTSGLQASINALGSTATVLT 360
K+ NF S V+LT+S GLQA+I+ALGS ATVLT
Sbjct: 559 KIGNFESGTVSLTVSACGLQATISALGSHATVLT 660
Score = 48.7 bits (100), Expect(4) = 5e-036
Identities = 20/34 (58%), Positives = 24/34 (70%)
Frame = +1 / -3
Query: 361 VRTVAVDPRALILAWSPLVEIVRVTASDPKFMTF 462
VRTVA DP AL++AWSP + VR+T D KF F
Sbjct: 659 VRTVACDPSALMVAWSPHADTVRLTVPDSKFPIF 558
Score = 22.1 bits (42), Expect(4) = 5e-036
Identities = 7/15 (46%), Positives = 12/15 (80%)
Frame = +2 / -2
Query: 308 AQPWLGC*RSFHPSH 352
AQP +G ++FHP++
Sbjct: 711 AQPLVGILKNFHPTN 667
>gb|BM097298.1|BM097298 EBro01_SQ004_M09_R root, 3 week, hydroponic grown, no treatment, cv
Optic, EBro01 Hordeum vulgare subsp. vulgare cDNA clone
EBro01_SQ004_M09 5', mRNA sequence
Length = 429
Score = 148 bits (317), Expect = 4e-035
Identities = 69/82 (84%), Positives = 74/82 (90%)
Frame = -3 / +2
Query: 434 VTLTISTSGLQASINALGSTATVLTSADVMDENSFSNPTKVVPVKSDLSNAAEQMQVTLA 255
V+LTIS SGLQASINALGS ATVLTS++V DENSFSNPTKVVPV S L NAAEQMQVTLA
Sbjct: 2 VSLTISVSGLQASINALGSNATVLTSSNVKDENSFSNPTKVVPVTSQLHNAAEQMQVTLA 181
Query: 254 PRSFSSFDLALAQSKLVAEM*A 189
SFSSFDLALAQS+LVAEM*+
Sbjct: 182 AHSFSSFDLALAQSELVAEM*S 247
Score = 136 bits (292), Expect = 1e-031
Identities = 65/84 (77%), Positives = 67/84 (79%)
Frame = +1 / -1
Query: 184 SLAHISATSLD*ARARSNELKERGASVTCICSAALLRSLFTGTTLVGLLKEFSSITSADV 363
SL HISATS D*A ARSNE KE ASVTCICSAAL L TGTTLVGLLKEFSS T DV
Sbjct: 252 SLLHISATSSD*ASARSNEEKEWAASVTCICSAALCN*LVTGTTLVGLLKEFSSFTLLDV 73
Query: 364 RTVAVDPRALILAWSPLVEIVRVT 435
RTVA DP AL+LAWSP EIVR+T
Sbjct: 72 RTVAFDPSALMLAWSPDTEIVRLT 1
>gb|CA025468.1|CA025468 HZ52E03r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ52E03
5-PRIME, mRNA sequence
Length = 462
Score = 147 bits (315), Expect = 8e-035
Identities = 62/115 (53%), Positives = 79/115 (68%)
Frame = -3 / +1
Query: 560 AMFHPTTIXXXXXXXXXXXAITWQDSENSFLRVKVINFGSDAVTLTISTSGLQASINALG 381
A+ HP + AITW D+E+ FLR+K++NFGS+AV LT+S GLQA +N
Sbjct: 10 AVIHPMRLNSSYSGSLAASAITWGDNEDIFLRIKIVNFGSNAVNLTLSAIGLQAGVNTSR 189
Query: 380 STATVLTSADVMDENSFSNPTKVVPVKSDLSNAAEQMQVTLAPRSFSSFDLALAQ 216
S TVLTS +V+DEN+F +P VVP +SDL NAAE+MQ L P SF+SFDLAL Q
Sbjct: 190 SAVTVLTSDNVLDENTFDDPRNVVPERSDLPNAAEEMQAMLVPHSFTSFDLALDQ 354
Score = 138 bits (295), Expect = 4e-032
Identities = 68/112 (60%), Positives = 80/112 (71%)
Frame = +1 / -2
Query: 217 *ARARSNELKERGASVTCICSAALLRSLFTGTTLVGLLKEFSSITSADVRTVAVDPRALI 396
*+RARSNE+KE G S+ CI SAAL RSL +GTTL G FSS T +DVRTV + L
Sbjct: 353 *SRARSNEVKE*GTSMACISSAALGRSLLSGTTLRGSSNVFSSNTLSDVRTVTAERDVLT 174
Query: 397 LAWSPLVEIVRVTASDPKFMTFTLRKLFSESCQVIADAASEPE*LELIVVGW 552
A SP+ + VR TA DPKF F LRK+ S S QVIADAA+EPE*LEL ++GW
Sbjct: 173 PACSPIADKVRFTAFDPKFTIFILRKISSLSPQVIADAANEPE*LELSLIGW 18
Score = 110 bits (234), Expect = 1e-023
Identities = 52/115 (45%), Positives = 71/115 (61%)
Frame = +3 / -1
Query: 216 LSQGEIERAEGARSQRDLHLLCSIAQIALYRHNLGWVAEGVFIHHIC*CENSGG*SQSVD 395
L Q +I+ +E R++ LHL CSI + + HN+ WV E V I HI CEN *+ +D
Sbjct: 354 LIQSQIK*SERVRNKHGLHLFCSIG*VTSFWHNVTWVIERVLIQHIVGCENGDS*A*RID 175
Query: 396 TGLEPTCGDCQGHSI*PEVYDLYS*EAVLGVLPGNRRRCK*T*VAGADCRWMEHS 560
T L+ C + HSI*P+V++LY E +L V PGN R C+*T VAG + M+HS
Sbjct: 174 TSLQSDCR*GEVHSI*PKVHNLYPQEDILIVSPGNCRCCQ*TRVAGIESHRMDHS 10
>gb|BE420972.1|BE420972 HWM004.E01 ITEC HWM Barley Leaf Library Hordeum vulgare subsp.
vulgare cDNA clone HWM004.E01, mRNA sequence
Length = 1149
Score = 92.7 bits (196), Expect(3) = 3e-034
Identities = 34/65 (52%), Positives = 43/65 (66%)
Frame = -3 / +1
Query: 653 RWNPDAIVFNSWQHYGTPSYWMQTLFRESSGAMFHPTTIXXXXXXXXXXXAITWQDSENS 474
+W+PDAIVFNSWQHYG P+YWM F++SSGA FHPTT+ AITWQ ++
Sbjct: 700 KWSPDAIVFNSWQHYGCPNYWMLHFFKDSSGATFHPTTMQISNYDQMVASAITWQSPKDK 879
Query: 473 FLRVK 459
+K
Sbjct: 880 STYLK 894
Score = 65.7 bits (137), Expect(3) = 3e-034
Identities = 29/62 (46%), Positives = 42/62 (67%)
Frame = -3 / +1
Query: 482 ENSFLRVKVINFGSDAVTLTISTSGLQASINALGSTATVLTSADVMDENSFSNPTKVVPV 303
++++L+ KV+NF AV L I+ +GL + I + GST TVLT ++ENS S+P KV PV
Sbjct: 877 KSTYLKNKVVNFRXQAVDLNITVTGLXSGIKSSGSTKTVLTFXAPVEENSSSHPQKVAPV 1056
Query: 302 KS 297
S
Sbjct: 1057 XS 1062
Score = 56.1 bits (116), Expect(3) = 7e-023
Identities = 24/39 (61%), Positives = 28/39 (71%)
Frame = +1 / -2
Query: 538 IVVGWNIAPLDSRKSVCIQ*LGVP*CCQELKTIASGFHL 654
+VVG +APL+S K IQ* G P*CC EL T+ASG HL
Sbjct: 815 MVVG*KVAPLESLKKCSIQ*FGHP*CCHELNTMASGLHL 699
Score = 49.6 bits (102), Expect(3) = 7e-023
Identities = 25/58 (43%), Positives = 33/58 (56%)
Frame = +1 / -2
Query: 298 LFTGTTLVGLLKEFSSITSADVRTVAVDPRALILAWSPLVEIVRVTASDPKFMTFTLR 471
L TG T G L+EFSS + +V TV V+P L+ SP+ ++R TA KF T R
Sbjct: 1061 LXTGATFWGWLEEFSSTGAXNVSTVFVEPELLMPLXSPVTVMLRSTACXRKFTTLFFR 888
Score = 38.6 bits (78), Expect(3) = 7e-023
Identities = 16/24 (66%), Positives = 19/24 (79%)
Frame = +1 / -2
Query: 652 LFFSSPVRKAASANEARRLPLPAS 723
LFFS+P R AASA+ A +PLPAS
Sbjct: 644 LFFSNPTRNAASASAATSVPLPAS 573
Score = 24.9 bits (48), Expect(3) = 3e-034
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -3 / +1
Query: 737 AVWRGDAGRGXXXXXXXXXXXLTGLEKN 654
AV DAG+G L GLEKN
Sbjct: 559 AVTGNDAGKGTLVAALAEAAFLVGLEKN 642
>gb|AJ462649.1|AJ462649 AJ462649 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200082D06F1, mRNA sequence
Length = 240
Score = 139 bits (299), Expect = 1e-032
Identities = 65/77 (84%), Positives = 69/77 (89%)
Frame = -3 / +2
Query: 419 STSGLQASINALGSTATVLTSADVMDENSFSNPTKVVPVKSDLSNAAEQMQVTLAPRSFS 240
S SGLQASINALGS ATVLTS++V DENSFSNPTKVVPV S L NAAEQMQVTLA SFS
Sbjct: 2 SVSGLQASINALGSNATVLTSSNVKDENSFSNPTKVVPVTSQLHNAAEQMQVTLAAHSFS 181
Query: 239 SFDLALAQSKLVAEM*A 189
SFDLALAQS+LVAEM*+
Sbjct: 182 SFDLALAQSELVAEM*S 232
Score = 127 bits (273), Expect = 5e-029
Identities = 61/79 (77%), Positives = 62/79 (78%)
Frame = +1 / -1
Query: 184 SLAHISATSLD*ARARSNELKERGASVTCICSAALLRSLFTGTTLVGLLKEFSSITSADV 363
SL HISATS D*A ARSNE KE ASVTCICSAAL L TGTTLVGLLKEFSS T DV
Sbjct: 237 SLLHISATSSD*ASARSNEEKEWAASVTCICSAALCN*LVTGTTLVGLLKEFSSFTLLDV 58
Query: 364 RTVAVDPRALILAWSPLVE 420
RTVA DP AL+LAWSP E
Sbjct: 57 RTVAFDPSALMLAWSPDTE 1
>gb|BU988298.1|BU988298 HF17D19r HF Hordeum vulgare subsp. vulgare cDNA clone HF17D19
5-PRIME, mRNA sequence
Length = 638
Score = 102 bits (218), Expect(2) = 2e-032
Identities = 45/54 (83%), Positives = 49/54 (90%)
Frame = +1 / -1
Query: 493 QVIADAASEPE*LELIVVGWNIAPLDSRKSVCIQ*LGVP*CCQELKTIASGFHL 654
QVIADAA EPE*LELIV+G +APLDSRK+ CIQ*LGVP CCQELKTIASGFH+
Sbjct: 638 QVIADAAREPE*LELIVIG*IMAPLDSRKNFCIQ*LGVPYCCQELKTIASGFHV 477
Score = 93.6 bits (198), Expect(2) = 1e-028
Identities = 36/52 (69%), Positives = 36/52 (69%)
Frame = -3 / +1
Query: 650 WNPDAIVFNSWQHYGTPSYWMQTLFRESSGAMFHPTTIXXXXXXXXXXXAIT 495
WNPDAIVFNSWQ YGTPSYWMQ FRESSGAM HP TI AIT
Sbjct: 481 WNPDAIVFNSWQQYGTPSYWMQKFFRESSGAMIHPITISSSYSGSLAASAIT 636
Score = 92.3 bits (195), Expect(2) = 6e-024
Identities = 36/61 (59%), Positives = 44/61 (72%)
Frame = +3 / -3
Query: 495 GNRRRCK*T*VAGADCRWMEHSTTRLAEKRLHPVTGSAVMLPGVEDDCVWVPPILLQSSK 674
G+ R C T VAG DC WM H TTR AEK LHPVT S+V+LPGVEDD +W+P +++ K
Sbjct: 636 GDSRCC*RTRVAGTDCNWMNHGTTRFAEKLLHPVTRSSVLLPGVEDDSIWIPRLIVVVYK 457
Query: 675 E 677
E
Sbjct: 456 E 454
Score = 56.5 bits (117), Expect(2) = 2e-032
Identities = 25/29 (86%), Positives = 26/29 (89%)
Frame = +1 / -1
Query: 652 LFFSSPVRKAASANEARRLPLPASPLQTA 738
LFFSSPVRKAASA+E RRLPLPAS L TA
Sbjct: 422 LFFSSPVRKAASASEPRRLPLPASVLHTA 336
Score = 52.8 bits (109), Expect(2) = 1e-028
Identities = 19/26 (73%), Positives = 23/26 (88%)
Frame = -1 / +2
Query: 733 FGEVMQVEEVFLLHWQKLLSLLDWRR 656
+GE+MQVEE FL+HWQ+L SLL WRR
Sbjct: 341 YGELMQVEEAFLVHWQRLPSLLGWRR 418
Score = 38.2 bits (77), Expect(2) = 6e-024
Identities = 15/23 (65%), Positives = 17/23 (73%)
Frame = +2 / -2
Query: 662 PVQ*GKQLLPMKQEDFLYLHHLS 730
P Q*G+Q LP+ QE FLYLH S
Sbjct: 412 PAQ*GRQPLPVNQEGFLYLHQFS 344
>gb|AL500044.1|AL500044 AL500044 Hordeum vulgare Barke etiolated leaves Hordeum vulgare
subsp. vulgare cDNA clone HK04K11r 3', mRNA sequence
Length = 499
Score = 113 bits (242), Expect(2) = 1e-030
Identities = 51/68 (75%), Positives = 57/68 (83%)
Frame = -3 / -1
Query: 461 KVINFGSDAVTLTISTSGLQASINALGSTATVLTSADVMDENSFSNPTKVVPVKSDLSNA 282
++ GSD ++ TIS SGLQASINALGS ATVLTS++V DENSFSNPTKVVPV S L NA
Sbjct: 484 RLXTSGSDTLSXTISVSGLQASINALGSNATVLTSSNVKDENSFSNPTKVVPVTSQLHNA 305
Query: 281 AEQMQVTL 258
AEQMQVTL
Sbjct: 304 AEQMQVTL 281
Score = 104 bits (222), Expect(2) = 3e-027
Identities = 47/64 (73%), Positives = 50/64 (78%)
Frame = +1 / +3
Query: 259 SVTCICSAALLRSLFTGTTLVGLLKEFSSITSADVRTVAVDPRALILAWSPLVEIVRVTA 438
SVTCICSAAL L TGTTLVGLLKEFSS T DVRTVA DP AL+LAWSP EIV +
Sbjct: 282 SVTCICSAALCN*LVTGTTLVGLLKEFSSFTLLDVRTVAFDPSALMLAWSPDTEIVXLKV 461
Query: 439 SDPK 450
SDP+
Sbjct: 462 SDPE 473
Score = 39.6 bits (80), Expect(2) = 1e-030
Identities = 18/20 (90%), Positives = 20/20 (100%)
Frame = -3 / -2
Query: 248 SFSSFDLALAQSKLVAEM*A 189
SFSSFDLALAQS+LVAEM*+
Sbjct: 270 SFSSFDLALAQSELVAEM*S 211
Score = 37.3 bits (75), Expect(2) = 3e-027
Identities = 18/22 (81%), Positives = 18/22 (81%)
Frame = +1 / +2
Query: 184 SLAHISATSLD*ARARSNELKE 249
SL HISATS D*A ARSNE KE
Sbjct: 206 SLLHISATSSD*ASARSNEEKE 271
>gb|BI947203.1|BI947203 HVSMEl0004D16f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0004D16f, mRNA sequence
Length = 845
Score = 128 bits (274), Expect = 4e-029
Identities = 58/121 (47%), Positives = 76/121 (62%)
Frame = -3 / +1
Query: 578 FRESSGAMFHPTTIXXXXXXXXXXXAITWQDSENSFLRVKVINFGSDAVTLTISTSGLQA 399
F +SSGA H + AIT D+E+ F+R+ ++NFG +AV LT+S GLQA
Sbjct: 127 FPDSSGAEIHAMRLTSCYSGSLPESAIT*GDNEDIFMRINIVNFGPNAVNLTLSAIGLQA 306
Query: 398 SINALGSTATVLTSADVMDENSFSNPTKVVPVKSDLSNAAEQMQVTLAPRSFSSFDLALA 219
+N S TV+T +V+DEN+F +P VVP SDL NA E+MQ L P SF+SFDLAL
Sbjct: 307 GVNTSRSAVTVVTFDNVLDENTFDDPPNVVPE*SDLPNAGEEMQAMLVPHSFTSFDLALD 486
Query: 218 Q 216
Q
Sbjct: 487 Q 489
Score = 116 bits (249), Expect = 1e-025
Identities = 60/121 (49%), Positives = 77/121 (63%)
Frame = +1 / -1
Query: 217 *ARARSNELKERGASVTCICSAALLRSLFTGTTLVGLLKEFSSITSADVRTVAVDPRALI 396
*+RARSNE+KE G S+ CI S AL RSL +GTTL G FSS T ++V TV +
Sbjct: 488 *SRARSNEVKE*GTSMACISSPALGRSLHSGTTLGGSSNVFSSNTLSNVTTVTAERDVFT 309
Query: 397 LAWSPLVEIVRVTASDPKFMTFTLRKLFSESCQVIADAASEPE*LELIVVGWNIAPLDSR 576
A SP+ + VR TA PK F L K+ S S QV+AD+ +EPE* E+ ++ W APL+S
Sbjct: 308 PACSPIADKVRFTAFGPKLTMFILMKISSLSPQVMADSGNEPE*QEVSLIAWISAPLESG 129
Query: 577 K 579
K
Sbjct: 128 K 126
>gb|BI951143.1|BI951143 HVSMEl0024K06f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0024K06f, mRNA sequence
Length = 866
Score = 127 bits (273), Expect = 5e-029
Identities = 69/132 (52%), Positives = 74/132 (56%)
Frame = +1 / -3
Query: 184 SLAHISATSLD*ARARSNELKERGASVTCICSAALLRSLFTGTTLVGLLKEFSSITSADV 363
SL HISA S D*A ARS KE V CICSA L SL G LVGLLKEFS V
Sbjct: 405 SLLHISAXSSD*ASARSTXEKEWPXRVPCICSAPLCXSLVPGPPLVGLLKEFSPFPLLYV 226
Query: 364 RTVAVDPRALILAWSPLVEIVRVTASDPKFMTFTLRKLFSESCQVIADAASEPE*LELIV 543
V P L+ P EIVR+ DPKF FTLRKL ESCQVI D + E* E IV
Sbjct: 225 FLVXFHPXXLMXXSPPPPEIVRLPVPDPKFTIFTLRKLSPESCQVIXDXXRDXE*XEXIV 46
Query: 544 VGWNIAPLDSRK 579
+ + I P RK
Sbjct: 45 IVFXIPPPPPRK 10
Score = 127 bits (272), Expect = 7e-029
Identities = 71/130 (54%), Positives = 79/130 (60%)
Frame = -3 / +2
Query: 578 FRESSGAMFHPTTIXXXXXXXXXXXAITWQDSENSFLRVKVINFGSDAVTLTISTSGLQA 399
FR G TI ITWQDS ++FLRVK++NFGS +LTIS G
Sbjct: 11 FRGGGGGXKKTITIXSXYSXSLXXSXITWQDSGDNFLRVKIVNFGSGTGSLTISGGGGXX 190
Query: 398 SINALGSTATVLTSADVMDENSFSNPTKVVPVKSDLSNAAEQMQVTLAPRSFSSFDLALA 219
IN LG T T + ENSFSNPTK P S L N AEQMQ TL SFS DLALA
Sbjct: 191 XINXLG*NXTKKTYNNGKGENSFSNPTKGGPGTSXLHNGAEQMQGTLXGHSFSXVDLALA 370
Query: 218 QSKLVAEM*A 189
QS+L AEM*+
Sbjct: 371 QSELXAEM*S 400
>gb|AV836811.1|AV836811 AV836811 K. Sato unpublished cDNA library: Hordeum vulgare subsp.
vulgare seedling leaves second leaf stage Hordeum
vulgare subsp. vulgare cDNA clone basd3o13, mRNA
sequence
Length = 556
Score = 111 bits (237), Expect(2) = 2e-028
Identities = 47/89 (52%), Positives = 64/89 (71%)
Frame = -3 / -1
Query: 479 NSFLRVKVINFGSDAVTLTISTSGLQASINALGSTATVLTSADVMDENSFSNPTKVVPVK 300
N++L++KV+NFG+ AV L+IS +GL+ I GS TVLTS + DENSF P KVVPV+
Sbjct: 451 NAYLKIKVLNFGNKAVDLSISITGLENGIQTFGSIKTVLTSGSLWDENSFQQPDKVVPVE 272
Query: 299 SDLSNAAEQMQVTLAPRSFSSFDLALAQS 213
S ++NA E+M + L P + +SFDL L QS
Sbjct: 271 SPITNAREEMSLVLDPYALTSFDLLLDQS 185
Score = 34.5 bits (69), Expect(2) = 2e-028
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = -3 / -1
Query: 575 RESSGAMFHPTTIXXXXXXXXXXXAITWQDSENSFLRVKV 456
R SGA HP+TI AITWQ+S++ +K+
Sbjct: 553 RTQSGAALHPSTIQVSNYNQLVASAITWQNSKDGNAYLKI 434
>gb|CA024671.1|CA024671 HZ49P14r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ49P14
5-PRIME, mRNA sequence
Length = 597
Score = 101 bits (216), Expect(2) = 4e-028
Identities = 43/52 (82%), Positives = 47/52 (90%)
Frame = +1 / -2
Query: 496 VIADAASEPE*LELIVVGWNIAPLDSRKSVCIQ*LGVP*CCQELKTIASGFH 651
VIADAA+EPE*LEL ++GW APLDSRK+VCIQ*LGVP CCQELKTIASG H
Sbjct: 596 VIADAANEPE*LELSLIGWITAPLDSRKNVCIQ*LGVPYCCQELKTIASGVH 441
Score = 42.8 bits (87), Expect(2) = 4e-028
Identities = 18/25 (72%), Positives = 21/25 (84%)
Frame = +1 / -2
Query: 652 LFFSSPVRKAASANEARRLPLPASP 726
LF S+P+R AASANEARR+PL SP
Sbjct: 383 LFTSNPMRNAASANEARRVPLLVSP 309
>gb|CA028812.1|CA028812 HZ63F05r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ63F05
5-PRIME, mRNA sequence
Length = 415
Score = 96.4 bits (204), Expect(2) = 2e-026
Identities = 40/49 (81%), Positives = 44/49 (89%)
Frame = +1 / -3
Query: 505 DAASEPE*LELIVVGWNIAPLDSRKSVCIQ*LGVP*CCQELKTIASGFH 651
DAA+EPE*LEL ++GW APLDSRK+VCIQ*LGVP CCQELKTIASG H
Sbjct: 413 DAANEPE*LELSLIGWITAPLDSRKNVCIQ*LGVPYCCQELKTIASGVH 267
Score = 42.8 bits (87), Expect(2) = 2e-026
Identities = 18/25 (72%), Positives = 21/25 (84%)
Frame = +1 / -3
Query: 652 LFFSSPVRKAASANEARRLPLPASP 726
LF S+P+R AASANEARR+PL SP
Sbjct: 209 LFTSNPMRNAASANEARRVPLLVSP 135
>gb|AV925177.1|AV925177 AV925177 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd22b16 5', mRNA sequence
Length = 639
Score = 84.0 bits (177), Expect(2) = 8e-026
Identities = 30/34 (88%), Positives = 30/34 (88%)
Frame = -3 / +1
Query: 650 WNPDAIVFNSWQHYGTPSYWMQTLFRESSGAMFH 549
WNPDAIVFNSWQ YGTPSYWMQ FRESSGAM H
Sbjct: 538 WNPDAIVFNSWQQYGTPSYWMQKFFRESSGAMIH 639
Score = 70.3 bits (147), Expect(2) = 8e-023
Identities = 28/33 (84%), Positives = 31/33 (93%)
Frame = +1 / -2
Query: 556 IAPLDSRKSVCIQ*LGVP*CCQELKTIASGFHL 654
+APLDSRK+ CIQ*LGVP CCQELKTIASGFH+
Sbjct: 632 MAPLDSRKNFCIQ*LGVPYCCQELKTIASGFHV 534
Score = 56.5 bits (117), Expect(2) = 8e-023
Identities = 25/29 (86%), Positives = 26/29 (89%)
Frame = +1 / -2
Query: 652 LFFSSPVRKAASANEARRLPLPASPLQTA 738
LFFSSPVRKAASA+E RRLPLPAS L TA
Sbjct: 479 LFFSSPVRKAASASEPRRLPLPASVLHTA 393
Score = 52.8 bits (109), Expect(2) = 8e-026
Identities = 19/26 (73%), Positives = 23/26 (88%)
Frame = -1 / +2
Query: 733 FGEVMQVEEVFLLHWQKLLSLLDWRR 656
+GE+MQVEE FL+HWQ+L SLL WRR
Sbjct: 398 YGELMQVEEAFLVHWQRLPSLLGWRR 475
>gb|BE437755.1|BE437755 SFR007.B08F990617 ITEC SFR Barley Leaf Epidermis Library Hordeum
vulgare subsp. vulgare cDNA clone SF, mRNA sequence
Length = 522
Score = 111 bits (237), Expect = 4e-024
Identities = 47/89 (52%), Positives = 64/89 (71%)
Frame = -3 / +1
Query: 479 NSFLRVKVINFGSDAVTLTISTSGLQASINALGSTATVLTSADVMDENSFSNPTKVVPVK 300
N++L++KV+NFG+ AV L+IS +GL+ I GS TVLTS + DENSF P KVVPV+
Sbjct: 58 NAYLKIKVLNFGNKAVDLSISITGLENGIQTFGSIKTVLTSGSLWDENSFQQPDKVVPVE 237
Query: 299 SDLSNAAEQMQVTLAPRSFSSFDLALAQS 213
S ++NA E+M + L P + +SFDL L QS
Sbjct: 238 SPITNAREEMSLVLDPYALTSFDLLLDQS 324
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 360,932,832
Number of Sequences: 312970
Number of extensions: 6056887
Number of successful extensions: 44077
Number of sequences better than 1.0e-020: 43
length of database: 58,378,179
effective HSP length: 51
effective length of database: 42,416,709
effective search space used: 8228841546
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)