TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3199064.2.1
(589 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BU985429.1|BU985429 HF07C20r HF Hordeum vulgare subsp. v... 186 5e-050
gb|BG415831.1|BG415831 HVSMEk0007P05f Hordeum vulgare testa... 173 8e-043
gb|BF261110.2|BF261110 HVSMEf0023M14f Hordeum vulgare seedl... 172 1e-042
gb|BG365276.1|BG365276 HVSMEi0002B22f Hordeum vulgare 20 DA... 172 1e-042
gb|BG414847.1|BG414847 HVSMEk0003P09f Hordeum vulgare testa... 172 1e-042
gb|BE230866.2|BE230866 HVSMEg0001A18f Hordeum vulgare pre-a... 172 1e-042
gb|BG414333.2|BG414333 HVSMEk0001I07f Hordeum vulgare testa... 172 1e-042
gb|BU994515.1|BU994515 HM07F03r HM Hordeum vulgare subsp. v... 172 1e-042
gb|CA003640.1|CA003640 HS15B20r HS Hordeum vulgare subsp. v... 172 1e-042
gb|CA007362.1|CA007362 HU07L06r HU Hordeum vulgare subsp. v... 172 1e-042
gb|CA007705.1|CA007705 HU08M22r HU Hordeum vulgare subsp. v... 172 1e-042
gb|CA008009.1|CA008009 HU09K06r HU Hordeum vulgare subsp. v... 172 1e-042
gb|CA029890.1|CA029890 HX05I01r HX Hordeum vulgare subsp. v... 172 1e-042
gb|CA031028.1|CA031028 HX08M24r HX Hordeum vulgare subsp. v... 172 1e-042
gb|CK123581.1|CK123581 BES1824104i15 BES1824 Hordeum vulgar... 172 1e-042
emb|X65871.1|HVSSYNMR H.vulgare mRNA for sucrose synthase 172 1e-042
gb|BG345116.2|BG345116 HVSMEg0018M02f Hordeum vulgare pre-a... 171 2e-042
gb|BI957022.1|BI957022 HVSMEn0007A12f Hordeum vulgare rachi... 170 5e-042
gb|BG368222.2|BG368222 HVSMEi0016L23f Hordeum vulgare 20 DA... 170 5e-042
gb|AL511145.1|AL511145 AL511145 Hordeum vulgare Barke devel... 170 7e-042
gb|BQ472946.1|BQ472946 HB01A03r BC Hordeum vulgare subsp. v... 170 7e-042
gb|BU973917.1|BU973917 HB26G10r BC Hordeum vulgare subsp. v... 170 7e-042
gb|CK124965.1|CK124965 BES1824111A2d09 BES1824 Hordeum vulg... 170 7e-042
emb|X69931.1|HVRNASS H.vulgare mRNA for sucrose synthase 170 7e-042
gb|BI957023.1|BI957023 HVSMEn0007A14f Hordeum vulgare rachi... 168 3e-041
gb|AL510834.1|AL510834 AL510834 Hordeum vulgare Barke devel... 166 9e-041
gb|BG414980.2|BG414980 HVSMEk0004I12f Hordeum vulgare testa... 166 9e-041
gb|BG415200.1|BG415200 HVSMEk0005I13f Hordeum vulgare testa... 165 2e-040
gb|AL511239.1|AL511239 AL511239 Hordeum vulgare Barke devel... 164 3e-040
gb|BE195797.3|BE195797 HVSMEh0090H19f Hordeum vulgare 5-45 ... 160 6e-039
gb|BG415034.1|BG415034 HVSMEk0004M12f Hordeum vulgare testa... 159 1e-038
gb|AV922975.1|AV922975 AV922975 K. Sato unpublished cDNA li... 158 2e-038
gb|BU973029.1|BU973029 HB23I05r BC Hordeum vulgare subsp. v... 158 3e-038
emb|Y15802.1|HVSUCSYN2 Hordeum vulgare Ss2 gene 105 6e-038
gb|BG369184.1|BG369184 HVSMEi0023A09f Hordeum vulgare 20 DA... 154 4e-037
gb|BI950121.1|BI950121 HVSMEl0018N18f Hordeum vulgare spike... 154 4e-037
gb|CA032999.1|CA032999 HX14N04r HX Hordeum vulgare subsp. v... 140 5e-037
gb|BU972703.1|BU972703 HB22H15r BC Hordeum vulgare subsp. v... 140 5e-037
gb|CA009422.1|CA009422 HU14B07r HU Hordeum vulgare subsp. v... 140 5e-037
gb|BI958295.1|BI958295 HVSMEn0014E13f Hordeum vulgare rachi... 151 3e-036
gb|BG367939.2|BG367939 HVSMEi0014N22f Hordeum vulgare 20 DA... 149 9e-036
gb|AL506015.1|AL506015 AL506015 Hordeum vulgare Barke devel... 148 2e-035
gb|CK122773.1|CK122773 BES1824105l14 BES1824 Hordeum vulgar... 145 2e-034
gb|CV060973.1|CV060973 BNEL63e10 Barley EST endosperm libra... 145 2e-034
gb|CV062712.1|CV062712 BNEL82b2 Barley EST endosperm librar... 145 2e-034
gb|BQ458449.1|BQ458449 HA05C18r HA Hordeum vulgare subsp. v... 140 7e-033
gb|BU968909.1|BU968909 HB08P07r BC Hordeum vulgare subsp. v... 137 5e-032
gb|AW983411.2|AW983411 HVSMEg0010I18f Hordeum vulgare pre-a... 122 3e-031
gb|BE195904.3|BE195904 HVSMEh0090N12f Hordeum vulgare 5-45 ... 134 4e-031
gb|AV925318.1|AV925318 AV925318 K. Sato unpublished cDNA li... 132 2e-030
gb|BU967592.1|BU967592 HB04M10r BC Hordeum vulgare subsp. v... 131 4e-030
gb|BI949170.1|BI949170 HVSMEl0012K08f Hordeum vulgare spike... 125 7e-030
gb|BE060290.2|BE060290 HVSMEg0011O01f Hordeum vulgare pre-a... 82 7e-030
gb|BI950098.1|BI950098 HVSMEl0018J22f Hordeum vulgare spike... 130 7e-030
gb|BU984717.1|BU984717 HF04M17r HF Hordeum vulgare subsp. v... 111 1e-029
gb|BE193575.3|BE193575 HVSMEh0081M04f Hordeum vulgare 5-45 ... 80 3e-029
gb|CA012429.1|CA012429 HT05G13r HT Hordeum vulgare subsp. v... 109 7e-028
gb|AL508802.1|AL508802 AL508802 Hordeum vulgare Barke devel... 111 7e-028
gb|CV063594.1|CV063594 BNEL91a9 Barley EST endosperm librar... 121 3e-027
gb|BU970962.1|BU970962 HB16D07r BC Hordeum vulgare subsp. v... 119 2e-026
gb|BI953547.1|BI953547 HVSMEm0013C16f Hordeum vulgare green... 75 4e-025
gb|BJ470033.1|BJ470033 BJ470033 K. Sato unpublished cDNA li... 66 2e-023
gb|CA017364.1|CA017364 HV12M11u HV Hordeum vulgare subsp. v... 66 2e-023
gb|BQ460398.1|BQ460398 HA09M15r HA Hordeum vulgare subsp. v... 66 2e-023
gb|CB860106.1|CB860106 HI12K21w HI Hordeum vulgare subsp. v... 66 2e-023
gb|BU984632.1|BU984632 HF04I06r HF Hordeum vulgare subsp. v... 66 2e-023
gb|BQ657072.1|BQ657072 HA09M15u HA Hordeum vulgare subsp. v... 66 2e-023
gb|BG415722.2|BG415722 HVSMEk0007J09f Hordeum vulgare testa... 106 5e-023
gb|BQ459992.1|BQ459992 HA07I08r HA Hordeum vulgare subsp. v... 105 2e-022
gb|BQ754675.1|BQ754675 EBed01_SQ003_H22_R endosperm, 6 DPA,... 105 2e-022
gb|BU968793.1|BU968793 HB08J17r BC Hordeum vulgare subsp. v... 105 2e-022
gb|BU987212.1|BU987212 HF14B23r HF Hordeum vulgare subsp. v... 105 2e-022
gb|AL507174.1|AL507174 AL507174 Hordeum vulgare Barke devel... 105 3e-022
gb|BQ465085.1|BQ465085 HU02J18r HU Hordeum vulgare subsp. v... 105 3e-022
gb|AL507949.1|AL507949 AL507949 Hordeum vulgare Barke devel... 104 5e-022
gb|BU985593.1|BU985593 HF08A21r HF Hordeum vulgare subsp. v... 102 2e-021
gb|AL505351.1|AL505351 AL505351 Hordeum vulgare Barke roots... 100 7e-021
gb|BQ460709.1|BQ460709 HA06C13r HA Hordeum vulgare subsp. v... 100 7e-021
gb|BU973694.1|BU973694 HB25K18r BC Hordeum vulgare subsp. v... 100 7e-021
gb|CB877276.1|CB877276 HP04D11T HP Hordeum vulgare subsp. v... 100 7e-021
>gb|BU985429.1|BU985429 HF07C20r HF Hordeum vulgare subsp. vulgare cDNA clone HF07C20
5-PRIME, mRNA sequence
Length = 432
Score = 186 bits (400), Expect(2) = 5e-050
Identities = 79/89 (88%), Positives = 85/89 (95%)
Frame = +3 / +1
Query: 42 NIVSPGADMSIYFPHTEKAKRLTSLHGSIENLIYDPEQNDEHIGHLDDRSKPILFSMARL 221
NIVSPGADMSIYFP TEKAKRLT+LHGSIE+LIYDPEQNDEHIGHLDD SKPILFSMARL
Sbjct: 85 NIVSPGADMSIYFPFTEKAKRLTALHGSIESLIYDPEQNDEHIGHLDDPSKPILFSMARL 264
Query: 222 DRVKNITGLVEAFAKCAKLRELVNLVVVA 308
DRVKN+TGLV+A++K AKLR LVNLVVVA
Sbjct: 265 DRVKNMTGLVKAYSKNAKLRSLVNLVVVA 351
Score = 146 bits (313), Expect(2) = 4e-038
Identities = 66/91 (72%), Positives = 71/91 (78%)
Frame = -1 / -2
Query: 307 ATTTRFTXXXXXXXXXXXXXSPVMFFTLSSLAMEKRMGFDRSSRCPMCSSFCSGS*IKFS 128
ATTTRFT SPVMF T SSLAMEKR+GFD SSRCPMCSSFCSGS*IK S
Sbjct: 350 ATTTRFTSDLSLAFLL*ALTSPVMFLTRSSLAMEKRIGFDGSSRCPMCSSFCSGS*IKLS 171
Query: 127 IEP*REVSRLAFSVCGKYMDMSAPGETILNF 35
IEP*R VSRLAFSV GKY+DMSAPG+T+L +
Sbjct: 170 IEP*RAVSRLAFSVNGKYIDMSAPGDTMLTW 78
Score = 121 bits (258), Expect(2) = 9e-030
Identities = 54/95 (56%), Positives = 66/95 (69%)
Frame = -3 / -1
Query: 320 VPVRCNDDKVYQLPQLSALSKSFDQPCYVLHPVESCHGEEDGL*PVIQMPNVFIVLLRVI 141
+ + + +KVYQ P LS + SFD C+V +PV+SCHGEE+ VIQM NVFIVLL VI
Sbjct: 363 IVIASDHNKVYQRP*LSVFTISFD*SCHVFNPVKSCHGEENWFRWVIQMSNVFIVLLWVI 184
Query: 140 NQIFD*TMKRGESLGLLGMWKVYGHVSSRRDYIEL 36
NQ +*TMK E LGL WK+Y HVSSRR Y+ L
Sbjct: 183 NQALN*TMKGSEPLGLFSEWKIYRHVSSRRYYVNL 79
Score = 118 bits (253), Expect(2) = 3e-028
Identities = 51/85 (60%), Positives = 64/85 (75%)
Frame = +2 / +3
Query: 44 YSLSWS*HVHILSTYREGQATHLSSWFNRKFDL*PGAKR*THWASG*PVKAHPLLHGKTR 223
+S+SWS*HV+I S + +GQA H SWFN + DL*P AKR*THW SG*P++ + LLHGKT
Sbjct: 87 HSISWS*HVYIFSIH*KGQAAHCPSWFN*ELDL*PRAKR*THWTSG*PIETNSLLHGKT* 266
Query: 224 QGEEHNRAGRSFC*VR*AEGAGKPC 298
G +H+R +S * R*A+ AGKPC
Sbjct: 267 PG*KHDRTSQSL**KR*AKVAGKPC 341
Score = 111 bits (237), Expect = 3e-024
Identities = 51/85 (60%), Positives = 59/85 (69%)
Frame = -2 / -3
Query: 300 RQGLPAPSA*RT*QKLRPALLCSSPCRVLPWRRGWALTGHPDAQCVHRFAPGHKSNFRLN 121
+QGLPA A*R KL L C P +VLPWRR GHPD QCVHRFA GHKS+ +LN
Sbjct: 343 QQGLPATLA*RFYYKL*LVLSCF*PGQVLPWRRELVSMGHPDVQCVHRFALGHKSSSQLN 164
Query: 120 HEER*VAWPSRYVESIWTCQLQERL 46
HE +* AWP + +E+I TCQLQE L
Sbjct: 163 HEGQ*AAWPFQ*MENI*TCQLQEIL 89
Score = 31.3 bits (62), Expect(2) = 4e-038
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = -1 / -3
Query: 52 ETILNFGSKTSIPWTTR 2
E + GSKTSIPWTTR
Sbjct: 97 EILC*LGSKTSIPWTTR 47
Score = 31.3 bits (62), Expect(2) = 5e-050
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = +3 / +3
Query: 3 RVVHGIDVFDPKFNIVS 53
RVVHGIDVFDP + +S
Sbjct: 48 RVVHGIDVFDPS*HSIS 98
Score = 28.6 bits (56), Expect(2) = 9e-030
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -2 / -1
Query: 51 RLY*TLDRRHRSHGQLG 1
R Y LD++H+SHGQ G
Sbjct: 96 RYYVNLDQKHQSHGQRG 46
Score = 25.8 bits (50), Expect(2) = 3e-028
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +2 / +2
Query: 2 PSCPWDRCLRSKV 40
P CPWD C SK+
Sbjct: 47 PRCPWD*CF*SKL 85
>gb|BG415831.1|BG415831 HVSMEk0007P05f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0007P05f, mRNA sequence
Length = 650
Score = 173 bits (372), Expect = 8e-043
Identities = 74/114 (64%), Positives = 87/114 (76%)
Frame = +3 / +3
Query: 3 RVVHGIDVFDPKFNIVSPGADMSIYFPHTEKAKRLTSLHGSIENLIYDPEQNDEHIGHLD 182
RVVHGIDVFDPKFNIVSPGADM++YFP+TE KRLT+ H IE L+Y +NDEH L
Sbjct: 150 RVVHGIDVFDPKFNIVSPGADMTVYFPYTETDKRLTAFHSEIEELLYSDVENDEHKFVLK 329
Query: 183 DRSKPILFSMARLDRVKNITGLVEAFAKCAKLRELVNLVVVATHGHSASGIYEE 344
DR+KPI+FSMARLDRVKN+TGLVE + K A L++L NLV+VA S EE
Sbjct: 330 DRNKPIIFSMARLDRVKNMTGLVEMYGKNAHLKDLANLVIVAGDHGKESNDREE 491
>gb|BF261110.2|BF261110 HVSMEf0023M14f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0023M14f, mRNA sequence
Length = 728
Score = 172 bits (371), Expect = 1e-042
Identities = 71/102 (69%), Positives = 84/102 (82%)
Frame = +3 / +2
Query: 3 RVVHGIDVFDPKFNIVSPGADMSIYFPHTEKAKRLTSLHGSIENLIYDPEQNDEHIGHLD 182
RVVHGIDVFDPKFNIVSPGADM++YFP+TE KRLT+ H IE L+Y +NDEH L
Sbjct: 62 RVVHGIDVFDPKFNIVSPGADMTVYFPYTETDKRLTAFHSEIEELLYSDVENDEHKFVLK 241
Query: 183 DRSKPILFSMARLDRVKNITGLVEAFAKCAKLRELVNLVVVA 308
DR+KPI+FSMARLDRVKN+TGLVE + K A L++L NLV+VA
Sbjct: 242 DRNKPIIFSMARLDRVKNMTGLVEMYGKNAHLKDLANLVIVA 367
>gb|BG365276.1|BG365276 HVSMEi0002B22f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0002B22f, mRNA sequence
Length = 818
Score = 172 bits (371), Expect = 1e-042
Identities = 71/102 (69%), Positives = 84/102 (82%)
Frame = +3 / +3
Query: 3 RVVHGIDVFDPKFNIVSPGADMSIYFPHTEKAKRLTSLHGSIENLIYDPEQNDEHIGHLD 182
RVVHGIDVFDPKFNIVSPGADM++YFP+TE KRLT+ H IE L+Y +NDEH L
Sbjct: 396 RVVHGIDVFDPKFNIVSPGADMTVYFPYTETDKRLTAFHSEIEELLYSDVENDEHKFVLK 575
Query: 183 DRSKPILFSMARLDRVKNITGLVEAFAKCAKLRELVNLVVVA 308
DR+KPI+FSMARLDRVKN+TGLVE + K A L++L NLV+VA
Sbjct: 576 DRNKPIIFSMARLDRVKNMTGLVEMYGKNAHLKDLANLVIVA 701
>gb|BG414847.1|BG414847 HVSMEk0003P09f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0003P09f, mRNA sequence
Length = 624
Score = 172 bits (371), Expect = 1e-042
Identities = 71/102 (69%), Positives = 84/102 (82%)
Frame = +3 / +1
Query: 3 RVVHGIDVFDPKFNIVSPGADMSIYFPHTEKAKRLTSLHGSIENLIYDPEQNDEHIGHLD 182
RVVHGIDVFDPKFNIVSPGADM++YFP+TE KRLT+ H IE L+Y +NDEH L
Sbjct: 112 RVVHGIDVFDPKFNIVSPGADMTVYFPYTETDKRLTAFHSEIEELLYSDVENDEHKFVLK 291
Query: 183 DRSKPILFSMARLDRVKNITGLVEAFAKCAKLRELVNLVVVA 308
DR+KPI+FSMARLDRVKN+TGLVE + K A L++L NLV+VA
Sbjct: 292 DRNKPIIFSMARLDRVKNMTGLVEMYGKNAHLKDLANLVIVA 417
>gb|BE230866.2|BE230866 HVSMEg0001A18f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0001A18f, mRNA sequence
Length = 603
Score = 172 bits (371), Expect = 1e-042
Identities = 71/102 (69%), Positives = 84/102 (82%)
Frame = +3 / +1
Query: 3 RVVHGIDVFDPKFNIVSPGADMSIYFPHTEKAKRLTSLHGSIENLIYDPEQNDEHIGHLD 182
RVVHGIDVFDPKFNIVSPGADM++YFP+TE KRLT+ H IE L+Y +NDEH L
Sbjct: 223 RVVHGIDVFDPKFNIVSPGADMTVYFPYTETDKRLTAFHSEIEELLYSDVENDEHKFVLK 402
Query: 183 DRSKPILFSMARLDRVKNITGLVEAFAKCAKLRELVNLVVVA 308
DR+KPI+FSMARLDRVKN+TGLVE + K A L++L NLV+VA
Sbjct: 403 DRNKPIIFSMARLDRVKNMTGLVEMYGKNAHLKDLANLVIVA 528
>gb|BG414333.2|BG414333 HVSMEk0001I07f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0001I07f, mRNA sequence
Length = 570
Score = 172 bits (371), Expect = 1e-042
Identities = 71/102 (69%), Positives = 84/102 (82%)
Frame = +3 / +3
Query: 3 RVVHGIDVFDPKFNIVSPGADMSIYFPHTEKAKRLTSLHGSIENLIYDPEQNDEHIGHLD 182
RVVHGIDVFDPKFNIVSPGADM++YFP+TE KRLT+ H IE L+Y +NDEH L
Sbjct: 246 RVVHGIDVFDPKFNIVSPGADMTVYFPYTETDKRLTAFHSEIEELLYSDVENDEHKFVLK 425
Query: 183 DRSKPILFSMARLDRVKNITGLVEAFAKCAKLRELVNLVVVA 308
DR+KPI+FSMARLDRVKN+TGLVE + K A L++L NLV+VA
Sbjct: 426 DRNKPIIFSMARLDRVKNMTGLVEMYGKNAHLKDLANLVIVA 551
>gb|BU994515.1|BU994515 HM07F03r HM Hordeum vulgare subsp. vulgare cDNA clone HM07F03
5-PRIME, mRNA sequence
Length = 605
Score = 172 bits (371), Expect = 1e-042
Identities = 71/102 (69%), Positives = 84/102 (82%)
Frame = +3 / +2
Query: 3 RVVHGIDVFDPKFNIVSPGADMSIYFPHTEKAKRLTSLHGSIENLIYDPEQNDEHIGHLD 182
RVVHGIDVFDPKFNIVSPGADM++YFP+TE KRLT+ H IE L+Y +NDEH L
Sbjct: 83 RVVHGIDVFDPKFNIVSPGADMTVYFPYTETDKRLTAFHSEIEELLYSDVENDEHKFVLK 262
Query: 183 DRSKPILFSMARLDRVKNITGLVEAFAKCAKLRELVNLVVVA 308
DR+KPI+FSMARLDRVKN+TGLVE + K A L++L NLV+VA
Sbjct: 263 DRNKPIIFSMARLDRVKNMTGLVEMYGKNAHLKDLANLVIVA 388
>gb|CA003640.1|CA003640 HS15B20r HS Hordeum vulgare subsp. vulgare cDNA clone HS15B20
5-PRIME, mRNA sequence
Length = 432
Score = 172 bits (371), Expect = 1e-042
Identities = 71/102 (69%), Positives = 84/102 (82%)
Frame = +3 / +1
Query: 3 RVVHGIDVFDPKFNIVSPGADMSIYFPHTEKAKRLTSLHGSIENLIYDPEQNDEHIGHLD 182
RVVHGIDVFDPKFNIVSPGADM++YFP+TE KRLT+ H IE L+Y +NDEH L
Sbjct: 70 RVVHGIDVFDPKFNIVSPGADMTVYFPYTETDKRLTAFHSEIEELLYSDVENDEHKFVLK 249
Query: 183 DRSKPILFSMARLDRVKNITGLVEAFAKCAKLRELVNLVVVA 308
DR+KPI+FSMARLDRVKN+TGLVE + K A L++L NLV+VA
Sbjct: 250 DRNKPIIFSMARLDRVKNMTGLVEMYGKNAHLKDLANLVIVA 375
>gb|CA007362.1|CA007362 HU07L06r HU Hordeum vulgare subsp. vulgare cDNA clone HU07L06
5-PRIME, mRNA sequence
Length = 663
Score = 172 bits (371), Expect = 1e-042
Identities = 71/102 (69%), Positives = 84/102 (82%)
Frame = +3 / +2
Query: 3 RVVHGIDVFDPKFNIVSPGADMSIYFPHTEKAKRLTSLHGSIENLIYDPEQNDEHIGHLD 182
RVVHGIDVFDPKFNIVSPGADM++YFP+TE KRLT+ H IE L+Y +NDEH L
Sbjct: 185 RVVHGIDVFDPKFNIVSPGADMTVYFPYTETDKRLTAFHSEIEELLYSDVENDEHKFVLK 364
Query: 183 DRSKPILFSMARLDRVKNITGLVEAFAKCAKLRELVNLVVVA 308
DR+KPI+FSMARLDRVKN+TGLVE + K A L++L NLV+VA
Sbjct: 365 DRNKPIIFSMARLDRVKNMTGLVEMYGKNAHLKDLANLVIVA 490
>gb|CA007705.1|CA007705 HU08M22r HU Hordeum vulgare subsp. vulgare cDNA clone HU08M22
5-PRIME, mRNA sequence
Length = 583
Score = 172 bits (371), Expect = 1e-042
Identities = 71/102 (69%), Positives = 84/102 (82%)
Frame = +3 / +2
Query: 3 RVVHGIDVFDPKFNIVSPGADMSIYFPHTEKAKRLTSLHGSIENLIYDPEQNDEHIGHLD 182
RVVHGIDVFDPKFNIVSPGADM++YFP+TE KRLT+ H IE L+Y +NDEH L
Sbjct: 185 RVVHGIDVFDPKFNIVSPGADMTVYFPYTETDKRLTAFHSEIEELLYSDVENDEHKFVLK 364
Query: 183 DRSKPILFSMARLDRVKNITGLVEAFAKCAKLRELVNLVVVA 308
DR+KPI+FSMARLDRVKN+TGLVE + K A L++L NLV+VA
Sbjct: 365 DRNKPIIFSMARLDRVKNMTGLVEMYGKNAHLKDLANLVIVA 490
>gb|CA008009.1|CA008009 HU09K06r HU Hordeum vulgare subsp. vulgare cDNA clone HU09K06
5-PRIME, mRNA sequence
Length = 646
Score = 172 bits (371), Expect = 1e-042
Identities = 71/102 (69%), Positives = 84/102 (82%)
Frame = +3 / +3
Query: 3 RVVHGIDVFDPKFNIVSPGADMSIYFPHTEKAKRLTSLHGSIENLIYDPEQNDEHIGHLD 182
RVVHGIDVFDPKFNIVSPGADM++YFP+TE KRLT+ H IE L+Y +NDEH L
Sbjct: 132 RVVHGIDVFDPKFNIVSPGADMTVYFPYTETDKRLTAFHSEIEELLYSDVENDEHKFVLK 311
Query: 183 DRSKPILFSMARLDRVKNITGLVEAFAKCAKLRELVNLVVVA 308
DR+KPI+FSMARLDRVKN+TGLVE + K A L++L NLV+VA
Sbjct: 312 DRNKPIIFSMARLDRVKNMTGLVEMYGKNAHLKDLANLVIVA 437
>gb|CA029890.1|CA029890 HX05I01r HX Hordeum vulgare subsp. vulgare cDNA clone HX05I01
5-PRIME, mRNA sequence
Length = 609
Score = 172 bits (371), Expect = 1e-042
Identities = 71/102 (69%), Positives = 84/102 (82%)
Frame = +3 / +3
Query: 3 RVVHGIDVFDPKFNIVSPGADMSIYFPHTEKAKRLTSLHGSIENLIYDPEQNDEHIGHLD 182
RVVHGIDVFDPKFNIVSPGADM++YFP+TE KRLT+ H IE L+Y +NDEH L
Sbjct: 234 RVVHGIDVFDPKFNIVSPGADMTVYFPYTETDKRLTAFHSEIEELLYSDVENDEHKFVLK 413
Query: 183 DRSKPILFSMARLDRVKNITGLVEAFAKCAKLRELVNLVVVA 308
DR+KPI+FSMARLDRVKN+TGLVE + K A L++L NLV+VA
Sbjct: 414 DRNKPIIFSMARLDRVKNMTGLVEMYGKNAHLKDLANLVIVA 539
>gb|CA031028.1|CA031028 HX08M24r HX Hordeum vulgare subsp. vulgare cDNA clone HX08M24
5-PRIME, mRNA sequence
Length = 616
Score = 172 bits (371), Expect = 1e-042
Identities = 71/102 (69%), Positives = 84/102 (82%)
Frame = +3 / +1
Query: 3 RVVHGIDVFDPKFNIVSPGADMSIYFPHTEKAKRLTSLHGSIENLIYDPEQNDEHIGHLD 182
RVVHGIDVFDPKFNIVSPGADM++YFP+TE KRLT+ H IE L+Y +NDEH L
Sbjct: 268 RVVHGIDVFDPKFNIVSPGADMTVYFPYTETDKRLTAFHSEIEELLYSDVENDEHKFVLK 447
Query: 183 DRSKPILFSMARLDRVKNITGLVEAFAKCAKLRELVNLVVVA 308
DR+KPI+FSMARLDRVKN+TGLVE + K A L++L NLV+VA
Sbjct: 448 DRNKPIIFSMARLDRVKNMTGLVEMYGKNAHLKDLANLVIVA 573
>gb|CK123581.1|CK123581 BES1824104i15 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010I154 5-PRIME, mRNA sequence
Length = 657
Score = 172 bits (371), Expect = 1e-042
Identities = 71/102 (69%), Positives = 84/102 (82%)
Frame = +3 / +1
Query: 3 RVVHGIDVFDPKFNIVSPGADMSIYFPHTEKAKRLTSLHGSIENLIYDPEQNDEHIGHLD 182
RVVHGIDVFDPKFNIVSPGADM++YFP+TE KRLT+ H IE L+Y +NDEH L
Sbjct: 262 RVVHGIDVFDPKFNIVSPGADMTVYFPYTETDKRLTAFHSEIEELLYSDVENDEHKFVLK 441
Query: 183 DRSKPILFSMARLDRVKNITGLVEAFAKCAKLRELVNLVVVA 308
DR+KPI+FSMARLDRVKN+TGLVE + K A L++L NLV+VA
Sbjct: 442 DRNKPIIFSMARLDRVKNMTGLVEMYGKNAHLKDLANLVIVA 567
>emb|X65871.1|HVSSYNMR H.vulgare mRNA for sucrose synthase
Length = 2667
Score = 172 bits (371), Expect = 1e-042
Identities = 71/102 (69%), Positives = 84/102 (82%)
Frame = +3 / +1
Query: 3 RVVHGIDVFDPKFNIVSPGADMSIYFPHTEKAKRLTSLHGSIENLIYDPEQNDEHIGHLD 182
RVVHGIDVFDPKFNIVSPGADM++YFP+TE KRLT+ H IE L+Y +NDEH L
Sbjct: 1507 RVVHGIDVFDPKFNIVSPGADMTVYFPYTETDKRLTAFHSEIEELLYSDVENDEHKFVLK 1686
Query: 183 DRSKPILFSMARLDRVKNITGLVEAFAKCAKLRELVNLVVVA 308
DR+KPI+FSMARLDRVKN+TGLVE + K A L++L NLV+VA
Sbjct: 1687 DRNKPIIFSMARLDRVKNMTGLVEMYGKNAHLKDLANLVIVA 1812
>gb|BG345116.2|BG345116 HVSMEg0018M02f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0018M02f, mRNA sequence
Length = 873
Score = 171 bits (369), Expect = 2e-042
Identities = 73/101 (72%), Positives = 84/101 (83%)
Frame = +3 / +3
Query: 3 RVVHGIDVFDPKFNIVSPGADMSIYFPHTEKAKRLTSLHGSIENLIYDPEQNDEHIGHLD 182
RVVHGIDVFDPKFNIVSPGADMSIYFP++E +RLTSLH IE L+Y N+EH L
Sbjct: 228 RVVHGIDVFDPKFNIVSPGADMSIYFPYSESQRRLTSLHPEIEELLYSNVDNNEHKYVLK 407
Query: 183 DRSKPILFSMARLDRVKNITGLVEAFAKCAKLRELVNLVVV 305
DR+KPI+FSMARLDRVKN+TGLVE + K +L+ELVNLVVV
Sbjct: 408 DRNKPIIFSMARLDRVKNLTGLVELYGKNPRLQELVNLVVV 530
>gb|BI957022.1|BI957022 HVSMEn0007A12f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0007A12f, mRNA sequence
Length = 1132
Score = 170 bits (366), Expect = 5e-042
Identities = 70/102 (68%), Positives = 83/102 (81%)
Frame = +3 / +1
Query: 3 RVVHGIDVFDPKFNIVSPGADMSIYFPHTEKAKRLTSLHGSIENLIYDPEQNDEHIGHLD 182
RVVHGIDVFDPKFNIVSPGADM++YFP+TE KRLT+ H IE L+Y +NDEH L
Sbjct: 142 RVVHGIDVFDPKFNIVSPGADMTVYFPYTETDKRLTAFHSEIEELLYSDVENDEHKFVLK 321
Query: 183 DRSKPILFSMARLDRVKNITGLVEAFAKCAKLRELVNLVVVA 308
DR+KPI+FSMARLDRVKN+TG VE + K A L++L NLV+VA
Sbjct: 322 DRNKPIIFSMARLDRVKNMTGXVEMYGKNAHLKDLANLVIVA 447
>gb|BG368222.2|BG368222 HVSMEi0016L23f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0016L23f, mRNA sequence
Length = 523
Score = 170 bits (366), Expect = 5e-042
Identities = 70/102 (68%), Positives = 83/102 (81%)
Frame = +3 / +3
Query: 3 RVVHGIDVFDPKFNIVSPGADMSIYFPHTEKAKRLTSLHGSIENLIYDPEQNDEHIGHLD 182
RVVHGIDVFDPKFNIVSPGADM++YFP+TE KRLT+ H IE L+Y NDEH L
Sbjct: 189 RVVHGIDVFDPKFNIVSPGADMTVYFPYTETDKRLTAFHSEIEELLYSDVDNDEHKFVLK 368
Query: 183 DRSKPILFSMARLDRVKNITGLVEAFAKCAKLRELVNLVVVA 308
DR+KPI+FSMAR+DRVKN+TGLVE + K A L++L NLV+VA
Sbjct: 369 DRNKPIIFSMARVDRVKNMTGLVEMYGKNAHLKDLANLVIVA 494
>gb|AL511145.1|AL511145 AL511145 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY07C09u 3',
mRNA sequence
Length = 576
Score = 170 bits (365), Expect = 7e-042
Identities = 72/101 (71%), Positives = 84/101 (83%)
Frame = +3 / +1
Query: 3 RVVHGIDVFDPKFNIVSPGADMSIYFPHTEKAKRLTSLHGSIENLIYDPEQNDEHIGHLD 182
RVVHGIDVFDPKFNIVSPGADMSIYFP+TE+ KRLTSLH IE L++ +N EH L
Sbjct: 202 RVVHGIDVFDPKFNIVSPGADMSIYFPYTEQQKRLTSLHTEIEELLFSDVENAEHKFVLK 381
Query: 183 DRSKPILFSMARLDRVKNITGLVEAFAKCAKLRELVNLVVV 305
D+ KPI+FSMARLDRVKN+TGLVE + + +L+ELVNLVVV
Sbjct: 382 DKKKPIIFSMARLDRVKNMTGLVEMYGRNPRLQELVNLVVV 504
Score = 108 bits (230), Expect = 3e-023
Identities = 53/101 (52%), Positives = 61/101 (60%)
Frame = -1 / -2
Query: 304 TTTRFTXXXXXXXXXXXXXSPVMFFTLSSLAMEKRMGFDRSSRCPMCSSFCSGS*IKFSI 125
TTTRFT PV+F T SSLA+EK +GF S +CS+F + SI
Sbjct: 503 TTTRFTSSCRRGFRPYISTRPVIFLTRSSLAIEKMIGFFLSFNTNLCSAFSTSLNSSSSI 324
Query: 124 EP*REVSRLAFSVCGKYMDMSAPGETILNFGSKTSIPWTTR 2
REVS SV GK MDMSAPG+T+LN GSKTSIPWTTR
Sbjct: 323 SVWREVSLFCCSVYGK*MDMSAPGDTMLNLGSKTSIPWTTR 201
>gb|BQ472946.1|BQ472946 HB01A03r BC Hordeum vulgare subsp. vulgare cDNA clone HB01A03
5-PRIME, mRNA sequence
Length = 622
Score = 170 bits (365), Expect = 7e-042
Identities = 72/101 (71%), Positives = 84/101 (83%)
Frame = +3 / +1
Query: 3 RVVHGIDVFDPKFNIVSPGADMSIYFPHTEKAKRLTSLHGSIENLIYDPEQNDEHIGHLD 182
RVVHGIDVFDPKFNIVSPGADMSIYFP+TE+ KRLTSLH IE L++ +N EH L
Sbjct: 241 RVVHGIDVFDPKFNIVSPGADMSIYFPYTEQQKRLTSLHTEIEELLFSDVENAEHKFVLK 420
Query: 183 DRSKPILFSMARLDRVKNITGLVEAFAKCAKLRELVNLVVV 305
D+ KPI+FSMARLDRVKN+TGLVE + + +L+ELVNLVVV
Sbjct: 421 DKKKPIIFSMARLDRVKNMTGLVEMYGRNPRLQELVNLVVV 543
Score = 108 bits (230), Expect = 3e-023
Identities = 53/101 (52%), Positives = 61/101 (60%)
Frame = -1 / -3
Query: 304 TTTRFTXXXXXXXXXXXXXSPVMFFTLSSLAMEKRMGFDRSSRCPMCSSFCSGS*IKFSI 125
TTTRFT PV+F T SSLA+EK +GF S +CS+F + SI
Sbjct: 542 TTTRFTSSCRRGFRPYISTRPVIFLTRSSLAIEKMIGFFLSFNTNLCSAFSTSLNSSSSI 363
Query: 124 EP*REVSRLAFSVCGKYMDMSAPGETILNFGSKTSIPWTTR 2
REVS SV GK MDMSAPG+T+LN GSKTSIPWTTR
Sbjct: 362 SVWREVSLFCCSVYGK*MDMSAPGDTMLNLGSKTSIPWTTR 240
>gb|BU973917.1|BU973917 HB26G10r BC Hordeum vulgare subsp. vulgare cDNA clone HB26G10
5-PRIME, mRNA sequence
Length = 509
Score = 170 bits (365), Expect = 7e-042
Identities = 72/101 (71%), Positives = 84/101 (83%)
Frame = +3 / +3
Query: 3 RVVHGIDVFDPKFNIVSPGADMSIYFPHTEKAKRLTSLHGSIENLIYDPEQNDEHIGHLD 182
RVVHGIDVFDPKFNIVSPGADMSIYFP+TE+ KRLTSLH IE L++ +N EH L
Sbjct: 207 RVVHGIDVFDPKFNIVSPGADMSIYFPYTEQQKRLTSLHTEIEELLFSDVENAEHKFVLK 386
Query: 183 DRSKPILFSMARLDRVKNITGLVEAFAKCAKLRELVNLVVV 305
D+ KPI+FSMARLDRVKN+TGLVE + + +L+ELVNLVVV
Sbjct: 387 DKKKPIIFSMARLDRVKNMTGLVEMYGRNPRLQELVNLVVV 509
Score = 108 bits (230), Expect = 3e-023
Identities = 53/101 (52%), Positives = 61/101 (60%)
Frame = -1 / -2
Query: 304 TTTRFTXXXXXXXXXXXXXSPVMFFTLSSLAMEKRMGFDRSSRCPMCSSFCSGS*IKFSI 125
TTTRFT PV+F T SSLA+EK +GF S +CS+F + SI
Sbjct: 508 TTTRFTSSCRRGFRPYISTRPVIFLTRSSLAIEKMIGFFLSFNTNLCSAFSTSLNSSSSI 329
Query: 124 EP*REVSRLAFSVCGKYMDMSAPGETILNFGSKTSIPWTTR 2
REVS SV GK MDMSAPG+T+LN GSKTSIPWTTR
Sbjct: 328 SVWREVSLFCCSVYGK*MDMSAPGDTMLNLGSKTSIPWTTR 206
>gb|CK124965.1|CK124965 BES1824111A2d09 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010D0911 5-PRIME, mRNA sequence
Length = 928
Score = 170 bits (365), Expect = 7e-042
Identities = 72/101 (71%), Positives = 84/101 (83%)
Frame = +3 / +1
Query: 3 RVVHGIDVFDPKFNIVSPGADMSIYFPHTEKAKRLTSLHGSIENLIYDPEQNDEHIGHLD 182
RVVHGIDVFDPKFNIVSPGADMSIYFP+TE+ KRLTSLH IE L++ +N EH L
Sbjct: 454 RVVHGIDVFDPKFNIVSPGADMSIYFPYTEQQKRLTSLHTEIEELLFSDVENAEHKFVLK 633
Query: 183 DRSKPILFSMARLDRVKNITGLVEAFAKCAKLRELVNLVVV 305
D+ KPI+FSMARLDRVKN+TGLVE + + +L+ELVNLVVV
Sbjct: 634 DKKKPIIFSMARLDRVKNMTGLVEMYGRNPRLQELVNLVVV 756
Score = 108 bits (230), Expect = 3e-023
Identities = 53/101 (52%), Positives = 61/101 (60%)
Frame = -1 / -3
Query: 304 TTTRFTXXXXXXXXXXXXXSPVMFFTLSSLAMEKRMGFDRSSRCPMCSSFCSGS*IKFSI 125
TTTRFT PV+F T SSLA+EK +GF S +CS+F + SI
Sbjct: 755 TTTRFTSSCRRGFRPYISTRPVIFLTRSSLAIEKMIGFFLSFNTNLCSAFSTSLNSSSSI 576
Query: 124 EP*REVSRLAFSVCGKYMDMSAPGETILNFGSKTSIPWTTR 2
REVS SV GK MDMSAPG+T+LN GSKTSIPWTTR
Sbjct: 575 SVWREVSLFCCSVYGK*MDMSAPGDTMLNLGSKTSIPWTTR 453
>emb|X69931.1|HVRNASS H.vulgare mRNA for sucrose synthase
Length = 2708
Score = 170 bits (365), Expect = 7e-042
Identities = 72/101 (71%), Positives = 84/101 (83%)
Frame = +3 / +2
Query: 3 RVVHGIDVFDPKFNIVSPGADMSIYFPHTEKAKRLTSLHGSIENLIYDPEQNDEHIGHLD 182
RVVHGIDVFDPKFNIVSPGADMSIYFP+TE+ KRLTSLH IE L++ +N EH L
Sbjct: 1547 RVVHGIDVFDPKFNIVSPGADMSIYFPYTEQQKRLTSLHTEIEELLFSDVENAEHKFVLK 1726
Query: 183 DRSKPILFSMARLDRVKNITGLVEAFAKCAKLRELVNLVVV 305
D+ KPI+FSMARLDRVKN+TGLVE + + +L+ELVNLVVV
Sbjct: 1727 DKKKPIIFSMARLDRVKNMTGLVEMYGRNPRLQELVNLVVV 1849
Score = 108 bits (230), Expect = 3e-023
Identities = 53/101 (52%), Positives = 61/101 (60%)
Frame = -1 / -3
Query: 304 TTTRFTXXXXXXXXXXXXXSPVMFFTLSSLAMEKRMGFDRSSRCPMCSSFCSGS*IKFSI 125
TTTRFT PV+F T SSLA+EK +GF S +CS+F + SI
Sbjct: 1848 TTTRFTSSCRRGFRPYISTRPVIFLTRSSLAIEKMIGFFLSFNTNLCSAFSTSLNSSSSI 1669
Query: 124 EP*REVSRLAFSVCGKYMDMSAPGETILNFGSKTSIPWTTR 2
REVS SV GK MDMSAPG+T+LN GSKTSIPWTTR
Sbjct: 1668 SVWREVSLFCCSVYGK*MDMSAPGDTMLNLGSKTSIPWTTR 1546
>gb|BI957023.1|BI957023 HVSMEn0007A14f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0007A14f, mRNA sequence
Length = 1125
Score = 168 bits (361), Expect = 3e-041
Identities = 70/102 (68%), Positives = 82/102 (80%)
Frame = +3 / +1
Query: 3 RVVHGIDVFDPKFNIVSPGADMSIYFPHTEKAKRLTSLHGSIENLIYDPEQNDEHIGHLD 182
RVVHGIDVFDPKFNIVSPGADM++YFP+TE KRLT+ H IE L+Y +NDEH L
Sbjct: 142 RVVHGIDVFDPKFNIVSPGADMTVYFPYTETDKRLTAFHSEIEELLYSDVENDEHKFVLK 321
Query: 183 DRSKPILFSMARLDRVKNITGLVEAFAKCAKLRELVNLVVVA 308
DR+KPI+FSMARLDR+KN+TGLVE F K L +L NLV+VA
Sbjct: 322 DRNKPIIFSMARLDRLKNMTGLVEMFGKNPHLIDLANLVIVA 447
>gb|AL510834.1|AL510834 AL510834 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY06C06u 3',
mRNA sequence
Length = 595
Score = 166 bits (357), Expect = 9e-041
Identities = 70/99 (70%), Positives = 82/99 (82%)
Frame = +3 / +1
Query: 3 RVVHGIDVFDPKFNIVSPGADMSIYFPHTEKAKRLTSLHGSIENLIYDPEQNDEHIGHLD 182
RVVHGIDVFDPKFNIVSPGADMSIYFP+TE+ KRLTSLH IE L++ +N EH L
Sbjct: 202 RVVHGIDVFDPKFNIVSPGADMSIYFPYTEQQKRLTSLHTEIEELLFSDVENAEHKFVLK 381
Query: 183 DRSKPILFSMARLDRVKNITGLVEAFAKCAKLRELVNLV 299
D+ KPI+FSMARLDRVKN+TGLVE + + +L+ELVNLV
Sbjct: 382 DKKKPIIFSMARLDRVKNMTGLVEMYGRNPRLQELVNLV 498
Score = 103 bits (220), Expect = 7e-022
Identities = 51/99 (51%), Positives = 59/99 (59%)
Frame = -1 / -3
Query: 298 TRFTXXXXXXXXXXXXXSPVMFFTLSSLAMEKRMGFDRSSRCPMCSSFCSGS*IKFSIEP 119
TRFT PV+F T SSLA+EK +GF S +CS+F + SI
Sbjct: 497 TRFTSSCRRGFRPYISTRPVIFLTRSSLAIEKMIGFFLSFNTNLCSAFSTSLNSSSSISV 318
Query: 118 *REVSRLAFSVCGKYMDMSAPGETILNFGSKTSIPWTTR 2
REVS SV GK MDMSAPG+T+LN GSKTSIPWTTR
Sbjct: 317 WREVSLFCCSVYGK*MDMSAPGDTMLNLGSKTSIPWTTR 201
>gb|BG414980.2|BG414980 HVSMEk0004I12f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0004I12f, mRNA sequence
Length = 895
Score = 166 bits (357), Expect = 9e-041
Identities = 70/99 (70%), Positives = 82/99 (82%)
Frame = +3 / +3
Query: 3 RVVHGIDVFDPKFNIVSPGADMSIYFPHTEKAKRLTSLHGSIENLIYDPEQNDEHIGHLD 182
RVVHGIDVFDPKFNIVSPGADMSIYFP+TE+ KRLTSLH IE L++ +N EH L
Sbjct: 438 RVVHGIDVFDPKFNIVSPGADMSIYFPYTEQQKRLTSLHTEIEELLFSDVENAEHKFVLK 617
Query: 183 DRSKPILFSMARLDRVKNITGLVEAFAKCAKLRELVNLV 299
D+ KPI+FSMARLDRVKN+TGLVE + + +L+ELVNLV
Sbjct: 618 DKKKPIIFSMARLDRVKNMTGLVEMYGRNPRLQELVNLV 734
Score = 103 bits (220), Expect = 7e-022
Identities = 51/99 (51%), Positives = 59/99 (59%)
Frame = -1 / -1
Query: 298 TRFTXXXXXXXXXXXXXSPVMFFTLSSLAMEKRMGFDRSSRCPMCSSFCSGS*IKFSIEP 119
TRFT PV+F T SSLA+EK +GF S +CS+F + SI
Sbjct: 733 TRFTSSCRRGFRPYISTRPVIFLTRSSLAIEKMIGFFLSFNTNLCSAFSTSLNSSSSISV 554
Query: 118 *REVSRLAFSVCGKYMDMSAPGETILNFGSKTSIPWTTR 2
REVS SV GK MDMSAPG+T+LN GSKTSIPWTTR
Sbjct: 553 WREVSLFCCSVYGK*MDMSAPGDTMLNLGSKTSIPWTTR 437
>gb|BG415200.1|BG415200 HVSMEk0005I13f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0005I13f, mRNA sequence
Length = 928
Score = 165 bits (354), Expect = 2e-040
Identities = 70/100 (70%), Positives = 83/100 (83%)
Frame = +3 / +2
Query: 3 RVVHGIDVFDPKFNIVSPGADMSIYFPHTEKAKRLTSLHGSIENLIYDPEQNDEHIGHLD 182
RVVHGIDVFDPKFNIVSPGADMSIYFP+TE+ KRLTSLH IE L++ +N EH L
Sbjct: 434 RVVHGIDVFDPKFNIVSPGADMSIYFPYTEQHKRLTSLHTEIEELLFSDVENAEHKFVLK 613
Query: 183 DRSKPILFSMARLDRVKNITGLVEAFAKCAKLRELVNLVV 302
DR+KPI+FSMARLDRVKN+TGL+E + + +L+ELVNL V
Sbjct: 614 DRTKPIIFSMARLDRVKNMTGLLEMYGRNPRLQELVNLWV 733
Score = 104 bits (222), Expect = 4e-022
Identities = 52/100 (52%), Positives = 60/100 (60%)
Frame = -1 / -2
Query: 301 TTRFTXXXXXXXXXXXXXSPVMFFTLSSLAMEKRMGFDRSSRCPMCSSFCSGS*IKFSIE 122
T RFT PV+F T SSLA+EK +GF S +CS+F + SI
Sbjct: 732 THRFTSSCRRGFRPYISSRPVIFLTRSSLAIEKMIGFVLSFNTNLCSAFSTSLNSSSSIS 553
Query: 121 P*REVSRLAFSVCGKYMDMSAPGETILNFGSKTSIPWTTR 2
REVS L SV GK MDMSAPG+T+LN GSKTSIPWTTR
Sbjct: 552 VWREVSLLCCSVYGK*MDMSAPGDTMLNLGSKTSIPWTTR 433
>gb|AL511239.1|AL511239 AL511239 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY07H01u 3',
mRNA sequence
Length = 586
Score = 164 bits (353), Expect = 3e-040
Identities = 70/99 (70%), Positives = 81/99 (81%)
Frame = +3 / +2
Query: 3 RVVHGIDVFDPKFNIVSPGADMSIYFPHTEKAKRLTSLHGSIENLIYDPEQNDEHIGHLD 182
RVVHGIDVFDPKFNIVSPGADMSIYFP+TE+ KRLTSLH IE L+ +N EH L
Sbjct: 203 RVVHGIDVFDPKFNIVSPGADMSIYFPYTEQXKRLTSLHTEIEELLXSDVKNAEHKFVLK 382
Query: 183 DRSKPILFSMARLDRVKNITGLVEAFAKCAKLRELVNLV 299
D+ KPI+FSMARLDRVKN+TGLVE + + +L+ELVNLV
Sbjct: 383 DKKKPIIFSMARLDRVKNMTGLVEMYGRNPRLQELVNLV 499
Score = 103 bits (219), Expect = 1e-021
Identities = 51/99 (51%), Positives = 59/99 (59%)
Frame = -1 / -2
Query: 298 TRFTXXXXXXXXXXXXXSPVMFFTLSSLAMEKRMGFDRSSRCPMCSSFCSGS*IKFSIEP 119
TRFT PV+F T SSLA+EK +GF S +CS+F + SI
Sbjct: 498 TRFTSSCRRGFRPYISTRPVIFLTRSSLAIEKMIGFFLSFNTNLCSAFLTSLXSSSSISV 319
Query: 118 *REVSRLAFSVCGKYMDMSAPGETILNFGSKTSIPWTTR 2
REVS SV GK MDMSAPG+T+LN GSKTSIPWTTR
Sbjct: 318 WREVSLXCCSVYGK*MDMSAPGDTMLNLGSKTSIPWTTR 202
>gb|BE195797.3|BE195797 HVSMEh0090H19f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0090H19f, mRNA sequence
Length = 630
Score = 160 bits (344), Expect = 6e-039
Identities = 68/99 (68%), Positives = 80/99 (80%)
Frame = +3 / +1
Query: 3 RVVHGIDVFDPKFNIVSPGADMSIYFPHTEKAKRLTSLHGSIENLIYDPEQNDEHIGHLD 182
RVVHGIDVFDPKFNIVSPGADMSIYFP+TE+ KRLTSLH IE L++ +N EH L
Sbjct: 298 RVVHGIDVFDPKFNIVSPGADMSIYFPYTEQQKRLTSLHTEIEELLFSDVENAEHKFVLK 477
Query: 183 DRSKPILFSMARLDRVKNITGLVEAFAKCAKLRELVNLV 299
D+ KPI+FSMARLDRVKN+TGLVE + + + L+ELV V
Sbjct: 478 DKKKPIIFSMARLDRVKNMTGLVEMYGRKSSLQELVKPV 594
Score = 100 bits (214), Expect = 5e-021
Identities = 50/99 (50%), Positives = 58/99 (58%)
Frame = -1 / -2
Query: 298 TRFTXXXXXXXXXXXXXSPVMFFTLSSLAMEKRMGFDRSSRCPMCSSFCSGS*IKFSIEP 119
T FT PV+F T SSLA+EK +GF S +CS+F + SI
Sbjct: 593 TGFTSSCSEDFRPYISTRPVIFLTRSSLAIEKMIGFFLSFNTNLCSAFSTSLNSSSSISV 414
Query: 118 *REVSRLAFSVCGKYMDMSAPGETILNFGSKTSIPWTTR 2
REVS SV GK MDMSAPG+T+LN GSKTSIPWTTR
Sbjct: 413 WREVSLFCCSVYGK*MDMSAPGDTMLNLGSKTSIPWTTR 297
>gb|BG415034.1|BG415034 HVSMEk0004M12f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0004M12f, mRNA sequence
Length = 907
Score = 159 bits (342), Expect = 1e-038
Identities = 68/102 (66%), Positives = 80/102 (78%)
Frame = +3 / +3
Query: 3 RVVHGIDVFDPKFNIVSPGADMSIYFPHTEKAKRLTSLHGSIENLIYDPEQNDEHIGHLD 182
RVVHGIDVFDPKFNIVSPGADM++YFP+TE KRLT+ H IE L+Y +NDEH L
Sbjct: 585 RVVHGIDVFDPKFNIVSPGADMTVYFPYTETDKRLTAFHSEIEELLYSDVENDEHKFVLK 764
Query: 183 DRSKPILFSMARLDRVKNITGLVEAFAKCAKLRELVNLVVVA 308
DR+KPI+FSMARLDRVKN+TGLVE + L+ L LV+VA
Sbjct: 765 DRNKPIIFSMARLDRVKNMTGLVEMDGQEPTLKGLGKLVIVA 890
>gb|AV922975.1|AV922975 AV922975 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd3d07 5', mRNA sequence
Length = 617
Score = 158 bits (340), Expect = 2e-038
Identities = 65/93 (69%), Positives = 76/93 (81%)
Frame = +3 / +1
Query: 3 RVVHGIDVFDPKFNIVSPGADMSIYFPHTEKAKRLTSLHGSIENLIYDPEQNDEHIGHLD 182
RVVHGIDVFDPKFNIVSPGADM++YFP+TE KRLT+ H IE L+Y +NDEH L
Sbjct: 337 RVVHGIDVFDPKFNIVSPGADMTVYFPYTETDKRLTAFHSEIEELLYSDVENDEHKFVLK 516
Query: 183 DRSKPILFSMARLDRVKNITGLVEAFAKCAKLR 281
DR+KPI+FSMARLDRVKN+TGLVE + K A L+
Sbjct: 517 DRNKPIIFSMARLDRVKNMTGLVEMYGKNAHLK 615
>gb|BU973029.1|BU973029 HB23I05r BC Hordeum vulgare subsp. vulgare cDNA clone HB23I05
5-PRIME, mRNA sequence
Length = 601
Score = 158 bits (339), Expect = 3e-038
Identities = 66/95 (69%), Positives = 78/95 (82%)
Frame = +3 / +3
Query: 3 RVVHGIDVFDPKFNIVSPGADMSIYFPHTEKAKRLTSLHGSIENLIYDPEQNDEHIGHLD 182
RVVHGIDVFDPKFNIVSPGADMSIYFP+TE+ KRLTSLH IE L++ +N EH L
Sbjct: 315 RVVHGIDVFDPKFNIVSPGADMSIYFPYTEQQKRLTSLHTEIEELLFSDVENAEHKFVLK 494
Query: 183 DRSKPILFSMARLDRVKNITGLVEAFAKCAKLREL 287
D+ KPI+FSMARLDRVKN+TGLVE + + +L+EL
Sbjct: 495 DKKKPIIFSMARLDRVKNMTGLVEMYGRNPRLQEL 599
>emb|Y15802.1|HVSUCSYN2 Hordeum vulgare Ss2 gene
Length = 5785
Score = 105 bits (224), Expect(2) = 6e-038
Identities = 42/55 (76%), Positives = 47/55 (85%)
Frame = +3 / +2
Query: 3 RVVHGIDVFDPKFNIVSPGADMSIYFPHTEKAKRLTSLHGSIENLIYDPEQNDEH 167
RVVHGIDVFDPKFNIVSPGADMSIYFP+TE+ KRLTSLH IE L++ +N EH
Sbjct: 4361 RVVHGIDVFDPKFNIVSPGADMSIYFPYTEQQKRLTSLHTEIEELLFSDVENAEH 4525
Score = 71.6 bits (150), Expect(2) = 6e-038
Identities = 30/43 (69%), Positives = 37/43 (86%)
Frame = +3 / +1
Query: 177 LDDRSKPILFSMARLDRVKNITGLVEAFAKCAKLRELVNLVVV 305
L D+ KPI+FSMARLDRVKN+TGLVE + + +L+ELVNLVVV
Sbjct: 4615 LKDKKKPIIFSMARLDRVKNMTGLVEMYGRNPRLQELVNLVVV 4743
>gb|BG369184.1|BG369184 HVSMEi0023A09f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0023A09f, mRNA sequence
Length = 806
Score = 154 bits (331), Expect = 4e-037
Identities = 63/102 (61%), Positives = 80/102 (78%)
Frame = +3 / +2
Query: 3 RVVHGIDVFDPKFNIVSPGADMSIYFPHTEKAKRLTSLHGSIENLIYDPEQNDEHIGHLD 182
RVVHGIDVFDPKFNIVSPGADM++YFP+TE KRLT+ H IE L+Y +NDEH L
Sbjct: 272 RVVHGIDVFDPKFNIVSPGADMTVYFPYTETDKRLTAFHSEIEELLYSDVENDEHKFGLK 451
Query: 183 DRSKPILFSMARLDRVKNITGLVEAFAKCAKLRELVNLVVVA 308
DR+KP++F+MAR+DRVKN+TGL + + K A L + +L +VA
Sbjct: 452 DRNKPMIFAMARVDRVKNMTGLRDMYGKNAHLED*ADLGIVA 577
>gb|BI950121.1|BI950121 HVSMEl0018N18f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0018N18f, mRNA sequence
Length = 881
Score = 154 bits (331), Expect = 4e-037
Identities = 65/97 (67%), Positives = 78/97 (80%)
Frame = +3 / +3
Query: 3 RVVHGIDVFDPKFNIVSPGADMSIYFPHTEKAKRLTSLHGSIENLIYDPEQNDEHIGHLD 182
RVVHGIDVFDPKFNIVSPGADMSIY P+TE+ KRLTSLH IE L++ +N EH L
Sbjct: 447 RVVHGIDVFDPKFNIVSPGADMSIYXPYTEQQKRLTSLHTEIEELLFSDVENAEHKFVLK 626
Query: 183 DRSKPILFSMARLDRVKNITGLVEAFAKCAKLRELVN 293
D+ KPI+FSMARLDRVKN+TGLV+ + + +L+EL N
Sbjct: 627 DKKKPIIFSMARLDRVKNMTGLVKMYGRDPRLQELGN 737
>gb|CA032999.1|CA032999 HX14N04r HX Hordeum vulgare subsp. vulgare cDNA clone HX14N04
5-PRIME, mRNA sequence
Length = 645
Score = 140 bits (300), Expect(2) = 5e-037
Identities = 58/89 (65%), Positives = 71/89 (79%)
Frame = +3 / +3
Query: 42 NIVSPGADMSIYFPHTEKAKRLTSLHGSIENLIYDPEQNDEHIGHLDDRSKPILFSMARL 221
NIVSPGADM++YFP+TE KRLT+ H IE L+Y +NDEH L DR+KPI+FSMARL
Sbjct: 63 NIVSPGADMTVYFPYTETDKRLTAFHSEIEELLYSDVENDEHKFVLKDRNKPIIFSMARL 242
Query: 222 DRVKNITGLVEAFAKCAKLRELVNLVVVA 308
DRVKN+TGLVE + K A L++L NLV+VA
Sbjct: 243 DRVKNMTGLVEMYGKNAHLKDLANLVIVA 329
Score = 33.6 bits (67), Expect(2) = 5e-037
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = +3 / +1
Query: 3 RVVHGIDVFDPKFNI 47
RVVHGIDVFDPK +
Sbjct: 25 RVVHGIDVFDPKLTL 69
>gb|BU972703.1|BU972703 HB22H15r BC Hordeum vulgare subsp. vulgare cDNA clone HB22H15
5-PRIME, mRNA sequence
Length = 570
Score = 140 bits (300), Expect(2) = 5e-037
Identities = 58/89 (65%), Positives = 71/89 (79%)
Frame = +3 / +1
Query: 42 NIVSPGADMSIYFPHTEKAKRLTSLHGSIENLIYDPEQNDEHIGHLDDRSKPILFSMARL 221
NIVSPGADM++YFP+TE KRLT+ H IE L+Y +NDEH L DR+KPI+FSMARL
Sbjct: 46 NIVSPGADMTVYFPYTETDKRLTAFHSEIEELLYSDVENDEHKFVLKDRNKPIIFSMARL 225
Query: 222 DRVKNITGLVEAFAKCAKLRELVNLVVVA 308
DRVKN+TGLVE + K A L++L NLV+VA
Sbjct: 226 DRVKNMTGLVEMYGKNAHLKDLANLVIVA 312
Score = 33.6 bits (67), Expect(2) = 5e-037
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = +3 / +2
Query: 3 RVVHGIDVFDPKFNI 47
RVVHGIDVFDPK +
Sbjct: 8 RVVHGIDVFDPKLTL 52
>gb|CA009422.1|CA009422 HU14B07r HU Hordeum vulgare subsp. vulgare cDNA clone HU14B07
5-PRIME, mRNA sequence
Length = 565
Score = 140 bits (300), Expect(2) = 5e-037
Identities = 58/89 (65%), Positives = 71/89 (79%)
Frame = +3 / +3
Query: 42 NIVSPGADMSIYFPHTEKAKRLTSLHGSIENLIYDPEQNDEHIGHLDDRSKPILFSMARL 221
NIVSPGADM++YFP+TE KRLT+ H IE L+Y +NDEH L DR+KPI+FSMARL
Sbjct: 72 NIVSPGADMTVYFPYTETDKRLTAFHSEIEELLYSDVENDEHKFVLKDRNKPIIFSMARL 251
Query: 222 DRVKNITGLVEAFAKCAKLRELVNLVVVA 308
DRVKN+TGLVE + K A L++L NLV+VA
Sbjct: 252 DRVKNMTGLVEMYGKNAHLKDLANLVIVA 338
Score = 33.6 bits (67), Expect(2) = 5e-037
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = +3 / +1
Query: 3 RVVHGIDVFDPKFNI 47
RVVHGIDVFDPK +
Sbjct: 34 RVVHGIDVFDPKLTL 78
>gb|BI958295.1|BI958295 HVSMEn0014E13f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0014E13f, mRNA sequence
Length = 646
Score = 151 bits (324), Expect = 3e-036
Identities = 63/84 (75%), Positives = 71/84 (84%)
Frame = +3 / +2
Query: 3 RVVHGIDVFDPKFNIVSPGADMSIYFPHTEKAKRLTSLHGSIENLIYDPEQNDEHIGHLD 182
RVVHGIDVFDPKFNIVSPGADMSIYFP++E +RLTSLH IE L+Y N+EH L
Sbjct: 392 RVVHGIDVFDPKFNIVSPGADMSIYFPYSESQRRLTSLHPEIEELLYSNVDNNEHKYVLK 571
Query: 183 DRSKPILFSMARLDRVKNITGLVE 254
DR+KPI+FSMARLDRVKN+TGLVE
Sbjct: 572 DRNKPIIFSMARLDRVKNLTGLVE 643
>gb|BG367939.2|BG367939 HVSMEi0014N22f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0014N22f, mRNA sequence
Length = 830
Score = 149 bits (321), Expect = 9e-036
Identities = 62/98 (63%), Positives = 76/98 (77%)
Frame = +3 / +1
Query: 3 RVVHGIDVFDPKFNIVSPGADMSIYFPHTEKAKRLTSLHGSIENLIYDPEQNDEHIGHLD 182
RVVHGIDVFDPKFNIVSPGADM++YFP+TE KRLT+ H IE L+Y +NDEH L
Sbjct: 439 RVVHGIDVFDPKFNIVSPGADMTVYFPYTETDKRLTAFHSEIEELLYSDVENDEHKFVLK 618
Query: 183 DRSKPILFSMARLDRVKNITGLVEAFAKCAKLRELVNL 296
D++KPI+FS ARLDRV+++ GLVE K A L++L L
Sbjct: 619 DKNKPIIFSRARLDRVEDMNGLVEMTGKNALLKDLATL 732
>gb|AL506015.1|AL506015 AL506015 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY01H24T 5',
mRNA sequence
Length = 574
Score = 148 bits (318), Expect = 2e-035
Identities = 63/95 (66%), Positives = 72/95 (75%)
Frame = +3 / +1
Query: 3 RVVHGIDVFDPKFNIVSPGADMSIYFPHTEKAKRLTSLHGSIENLIYDPEQNDEHIGHLD 182
RV HGIDVFDPKFNIVSPGA M++YFP+TE KRLT+ H IE L+Y +NDEH L
Sbjct: 274 RVXHGIDVFDPKFNIVSPGAXMTVYFPYTETDKRLTAFHSEIEELLYSDVENDEHKFVLK 453
Query: 183 DRSKPILFSMARLDRVKNITGLVEAFAKCAKLREL 287
DR+KPI+FSMAR DRVKN+TGLVE K A L L
Sbjct: 454 DRNKPIIFSMARXDRVKNMTGLVEMSGKNAHLEGL 558
>gb|CK122773.1|CK122773 BES1824105l14 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010L145 5-PRIME, mRNA sequence
Length = 720
Score = 145 bits (312), Expect = 2e-034
Identities = 61/93 (65%), Positives = 73/93 (78%)
Frame = +3 / +3
Query: 3 RVVHGIDVFDPKFNIVSPGADMSIYFPHTEKAKRLTSLHGSIENLIYDPEQNDEHIGHLD 182
RVVHGIDVFDPKFNIVSPGADMSIYFP+TE+ KRLTSLH IE L++ +N EH L
Sbjct: 441 RVVHGIDVFDPKFNIVSPGADMSIYFPYTEQQKRLTSLHTEIEELLFSDVENAEHKFVLK 620
Query: 183 DRSKPILFSMARLDRVKNITGLVEAFAKCAKLR 281
D+ KPI+FSMA LDRV N+TGLV + + +L+
Sbjct: 621 DKKKPIIFSMAXLDRVXNMTGLVXMYGRNPRLQ 719
>gb|CV060973.1|CV060973 BNEL63e10 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL63e10 5' similar to Sucrose
synthase 1, mRNA sequence
Length = 621
Score = 145 bits (311), Expect = 2e-034
Identities = 60/91 (65%), Positives = 73/91 (80%)
Frame = +3 / +3
Query: 36 KFNIVSPGADMSIYFPHTEKAKRLTSLHGSIENLIYDPEQNDEHIGHLDDRSKPILFSMA 215
KFNIVSPGADM++YFP+TE KRLT+ H IE L+Y +NDEH L DR+KPI+FSMA
Sbjct: 3 KFNIVSPGADMTVYFPYTETDKRLTAFHSEIEELLYSDVENDEHKFVLKDRNKPIIFSMA 182
Query: 216 RLDRVKNITGLVEAFAKCAKLRELVNLVVVA 308
RLDRVKN+TGLVE + K A L++L NLV+VA
Sbjct: 183 RLDRVKNMTGLVEMYGKNAHLKDLANLVIVA 275
>gb|CV062712.1|CV062712 BNEL82b2 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL82b2 5' similar to sucrose
synthase, mRNA sequence
Length = 579
Score = 145 bits (311), Expect = 2e-034
Identities = 60/91 (65%), Positives = 73/91 (80%)
Frame = +3 / +3
Query: 36 KFNIVSPGADMSIYFPHTEKAKRLTSLHGSIENLIYDPEQNDEHIGHLDDRSKPILFSMA 215
KFNIVSPGADM++YFP+TE KRLT+ H IE L+Y +NDEH L DR+KPI+FSMA
Sbjct: 3 KFNIVSPGADMTVYFPYTETDKRLTAFHSEIEELLYSDVENDEHKFVLKDRNKPIIFSMA 182
Query: 216 RLDRVKNITGLVEAFAKCAKLRELVNLVVVA 308
RLDRVKN+TGLVE + K A L++L NLV+VA
Sbjct: 183 RLDRVKNMTGLVEMYGKNAHLKDLANLVIVA 275
>gb|BQ458449.1|BQ458449 HA05C18r HA Hordeum vulgare subsp. vulgare cDNA clone HA05C18
5-PRIME, mRNA sequence
Length = 619
Score = 140 bits (300), Expect = 7e-033
Identities = 58/89 (65%), Positives = 71/89 (79%)
Frame = +3 / +2
Query: 42 NIVSPGADMSIYFPHTEKAKRLTSLHGSIENLIYDPEQNDEHIGHLDDRSKPILFSMARL 221
NIVSPGADM++YFP+TE KRLT+ H IE L+Y +NDEH L DR+KPI+FSMARL
Sbjct: 26 NIVSPGADMTVYFPYTETDKRLTAFHSEIEELLYSDVENDEHKFVLKDRNKPIIFSMARL 205
Query: 222 DRVKNITGLVEAFAKCAKLRELVNLVVVA 308
DRVKN+TGLVE + K A L++L NLV+VA
Sbjct: 206 DRVKNMTGLVEMYGKNAHLKDLANLVIVA 292
>gb|BU968909.1|BU968909 HB08P07r BC Hordeum vulgare subsp. vulgare cDNA clone HB08P07
5-PRIME, mRNA sequence
Length = 515
Score = 137 bits (294), Expect = 5e-032
Identities = 59/88 (67%), Positives = 71/88 (80%)
Frame = +3 / +1
Query: 42 NIVSPGADMSIYFPHTEKAKRLTSLHGSIENLIYDPEQNDEHIGHLDDRSKPILFSMARL 221
NIVSPGADMSIYFP+TE+ KRLTSLH IE L++ +N EH L D+ KPI+FSMARL
Sbjct: 76 NIVSPGADMSIYFPYTEQQKRLTSLHTEIEELLFSDVENAEHKFVLKDKKKPIIFSMARL 255
Query: 222 DRVKNITGLVEAFAKCAKLRELVNLVVV 305
DRVKN+TGLVE + + +L+ELVNLVVV
Sbjct: 256 DRVKNMTGLVEMYGRNPRLQELVNLVVV 339
>gb|AW983411.2|AW983411 HVSMEg0010I18f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0010I18f, mRNA sequence
Length = 799
Score = 122 bits (260), Expect(2) = 3e-031
Identities = 50/71 (70%), Positives = 58/71 (81%)
Frame = +3 / +1
Query: 3 RVVHGIDVFDPKFNIVSPGADMSIYFPHTEKAKRLTSLHGSIENLIYDPEQNDEHIGHLD 182
RVVHGIDVFDPKFNIVSPGADMSIYFP++E +RLTSLH IE L+Y N+EH L
Sbjct: 370 RVVHGIDVFDPKFNIVSPGADMSIYFPYSESQRRLTSLHPEIEELLYSNVDNNEHKYVLK 549
Query: 183 DRSKPILFSMA 215
DR+KPI+FS+A
Sbjct: 550 DRNKPIIFSLA 582
Score = 32.7 bits (65), Expect(2) = 3e-031
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = +3 / +2
Query: 216 RLDRVKNITGLVEAFAK 266
RLDRVKN+TGLV+ + K
Sbjct: 584 RLDRVKNLTGLVDLYGK 634
>gb|BE195904.3|BE195904 HVSMEh0090N12f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0090N12f, mRNA sequence
Length = 501
Score = 134 bits (287), Expect = 4e-031
Identities = 54/75 (72%), Positives = 62/75 (82%)
Frame = +3 / +3
Query: 3 RVVHGIDVFDPKFNIVSPGADMSIYFPHTEKAKRLTSLHGSIENLIYDPEQNDEHIGHLD 182
RVVHGIDVFDPKFNIVSPGADM++YFP+TE KRLT+ H IE L+Y +NDEH L
Sbjct: 30 RVVHGIDVFDPKFNIVSPGADMTVYFPYTETDKRLTAFHSEIEELLYSDVENDEHKFVLK 209
Query: 183 DRSKPILFSMARLDR 227
DR+KPI+FSMARLDR
Sbjct: 210 DRNKPIIFSMARLDR 254
>gb|AV925318.1|AV925318 AV925318 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd22k18 5', mRNA sequence
Length = 651
Score = 132 bits (282), Expect = 2e-030
Identities = 53/74 (71%), Positives = 61/74 (82%)
Frame = +3 / +3
Query: 3 RVVHGIDVFDPKFNIVSPGADMSIYFPHTEKAKRLTSLHGSIENLIYDPEQNDEHIGHLD 182
RVVHGIDVFDPKFNIVSPGADM++YFP+TE KRLT+ H IE L+Y +NDEH L
Sbjct: 429 RVVHGIDVFDPKFNIVSPGADMTVYFPYTETDKRLTAFHSEIEELLYSDVENDEHKFVLK 608
Query: 183 DRSKPILFSMARLD 224
DR+KPI+FSMARLD
Sbjct: 609 DRNKPIIFSMARLD 650
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 306,440,690
Number of Sequences: 312970
Number of extensions: 4909624
Number of successful extensions: 75578
Number of sequences better than 1.0e-020: 101
length of database: 58,378,179
effective HSP length: 51
effective length of database: 42,416,709
effective search space used: 6108006096
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)