TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3198841.2.3
(792 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BU987196.1|BU987196 HF14B07r HF Hordeum vulgare subsp. v... 288 1e-095
gb|BU971843.1|BU971843 HB19N11r BC Hordeum vulgare subsp. v... 286 2e-079
gb|BF629044.2|BF629044 HVSMEb0009K16f Hordeum vulgare seedl... 267 6e-071
gb|BG343770.2|BG343770 HVSMEg0006L08f Hordeum vulgare pre-a... 267 6e-071
gb|AV923368.1|AV923368 AV923368 K. Sato unpublished cDNA li... 267 6e-071
gb|AV927080.1|AV927080 AV927080 K. Sato unpublished cDNA li... 267 6e-071
gb|BQ465500.1|BQ465500 HU03N03r HU Hordeum vulgare subsp. v... 267 6e-071
gb|CA007573.1|CA007573 HU08G03r HU Hordeum vulgare subsp. v... 267 6e-071
gb|CA008104.1|CA008104 HU09O15r HU Hordeum vulgare subsp. v... 267 6e-071
gb|BQ466698.1|BQ466698 HS01E20T HS Hordeum vulgare subsp. v... 265 2e-070
gb|BQ467017.1|BQ467017 HS02E20r HS Hordeum vulgare subsp. v... 265 2e-070
gb|CA002379.1|CA002379 HS07F02r HS Hordeum vulgare subsp. v... 265 2e-070
gb|CA008721.1|CA008721 HU11O06r HU Hordeum vulgare subsp. v... 264 3e-070
gb|BG342914.2|BG342914 HVSMEg0001E07f Hordeum vulgare pre-a... 263 8e-070
gb|BF619842.2|BF619842 HVSMEc0009G18f Hordeum vulgare seedl... 241 4e-063
gb|BG369930.2|BG369930 HVSMEi0026J11f Hordeum vulgare 20 DA... 239 2e-062
gb|CA008339.1|CA008339 HU10K10r HU Hordeum vulgare subsp. v... 236 1e-061
gb|CA008597.1|CA008597 HU11H12r HU Hordeum vulgare subsp. v... 176 5e-061
gb|AL505025.1|AL505025 AL505025 Hordeum vulgare Barke roots... 211 3e-054
gb|CA006612.1|CA006612 HU05D02r HU Hordeum vulgare subsp. v... 204 4e-052
gb|BJ464822.1|BJ464822 BJ464822 K. Sato unpublished cDNA li... 147 5e-051
gb|BG342949.2|BG342949 HVSMEg0001H04f Hordeum vulgare pre-a... 193 7e-051
gb|DW474945.1|DW474945 22-n221 Subtracted libraries from ep... 188 4e-050
gb|AV909143.1|AV909143 AV909143 K. Sato unpublished cDNA li... 186 2e-049
gb|AV923846.1|AV923846 AV923846 K. Sato unpublished cDNA li... 193 1e-048
gb|AV923246.1|AV923246 AV923246 K. Sato unpublished cDNA li... 144 6e-045
gb|CA012048.1|CA012048 HT04E17r HT Hordeum vulgare subsp. v... 169 3e-044
gb|BF616887.1|BF616887 HVSMEc0013G20f Hordeum vulgare seedl... 121 3e-044
gb|BI959212.1|BI959212 HVSMEn0018K16f Hordeum vulgare rachi... 109 1e-043
gb|BE216717.2|BE216717 HV_CEb0011F08f Hordeum vulgare seedl... 122 2e-043
gb|CB882449.1|CB882449 HL01O07w HL Hordeum vulgare subsp. v... 138 4e-032
gb|CA004832.1|CA004832 HS18N03r HS Hordeum vulgare subsp. v... 133 2e-030
gb|BG309299.2|BG309299 HVSMEc0007D18f Hordeum vulgare seedl... 126 1e-029
gb|BF625611.2|BF625611 HVSMEa0011O14f Hordeum vulgare seedl... 122 3e-027
gb|AV936335.1|AV936335 AV936335 K. Sato unpublished cDNA li... 109 3e-025
gb|BI950307.1|BI950307 HVSMEl0020C23f Hordeum vulgare spike... 104 6e-025
gb|CD663353.1|CD663353 UCRHV18_05ah10_b1 Drought-stressed D... 102 2e-021
>gb|BU987196.1|BU987196 HF14B07r HF Hordeum vulgare subsp. vulgare cDNA clone HF14B07
5-PRIME, mRNA sequence
Length = 613
Score = 288 bits (624), Expect(2) = 1e-095
Identities = 103/136 (75%), Positives = 119/136 (87%)
Frame = +3 / +1
Query: 294 NTDKINGSNPDDYEKFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDK 473
+T ++NGSN D+YE+FEKG+M YGC HYRRRCRIRAPCCN+IFDCRHCHNE+KNSI+ID
Sbjct: 10 DTARVNGSNSDEYERFEKGLMEYGCAHYRRRCRIRAPCCNDIFDCRHCHNESKNSIRIDT 189
Query: 474 MKRHELPRHEVQQVVCSLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHCNX 653
+RHELPRHE+QQV+CSLCGTEQEVRQ+CI+CGVCMGKYFC +CKLFDDDVSKQQYHC+
Sbjct: 190 PRRHELPRHELQQVICSLCGTEQEVRQICISCGVCMGKYFCEVCKLFDDDVSKQQYHCHG 369
Query: 654 XXXXXXXXXENFFHCS 701
ENFFHCS
Sbjct: 370 CGICRIGGRENFFHCS 417
Score = 217 bits (469), Expect(2) = 1e-068
Identities = 89/117 (76%), Positives = 95/117 (81%)
Frame = -3 / -3
Query: 646 Q*YCCLETSSSKSLHKPQKYFPMQTPQLIHTCRTSCSVPHNEHTTCCTSWRGSSCLFILS 467
Q*YCC ETSSSKSLH QKYFPM TPQL+H CRTSCSVPHNEH TCC+SWRGSSC +S
Sbjct: 362 Q*YCCFETSSSKSLHTSQKYFPMHTPQLMHICRTSCSVPHNEHMTCCSSWRGSSCRLGVS 183
Query: 466 ILMEFLVSLWQCRQSKISLQQGALMRHLLL*CGHP*CIIPFSNFS*SSGFEPLILSV 296
IL+EF SLWQCRQSK+SLQQGA MRHLL *C HP I PFSN S SS EPL L+V
Sbjct: 182 ILIEFFDSLWQCRQSKMSLQQGARMRHLLR*CAHPYSINPFSNLSYSSELEPLTLAV 12
Score = 191 bits (412), Expect(2) = 5e-059
Identities = 85/135 (62%), Positives = 95/135 (70%)
Frame = -1 / -1
Query: 702 LNSGRNSPSLRFYIFHIRCSDTAV*RHHRRRVCTNHRSISPCKHRN*YILVAPPVQCHTM 523
L+S RNSP +F IFH SDTAV RHH +R CT HR+ SPC H +* I V P VQCHTM
Sbjct: 418 LSSERNSPCHQFCIFHNHGSDTAVLRHHHQRACTLHRNTSPCIHHS*CIFVVPLVQCHTM 239
Query: 522 SIQPAALHGVEVHASSFYQF*WNS*FHCGSVGNQKFHCSKELLCGISFYNVDTHSALSLS 343
SI PAA+HGVEVH + YQF* NS HCGS GNQK HCSK L+CGI F NV H+ L S
Sbjct: 238 SI*PAAVHGVEVHVA*EYQF*SNSLIHCGSAGNQKCHCSKVLVCGIFFGNVHIHTPLIPS 59
Query: 342 QISHSHQGLNH*SCL 298
QI H+HQ NH* L
Sbjct: 58 QIFHTHQS*NH*PWL 14
Score = 187 bits (402), Expect(2) = 6e-057
Identities = 88/137 (64%), Positives = 103/137 (75%)
Frame = -2 / -2
Query: 701 *TVEEILPPSDSTYSTSVAVILLFRDIIVEEFAQTTEVFPHANTAIDTYLSHLLFSATQ* 522
* V+EILP ++S YST++AVILLF DII++E A TE+ PHA T D YLS+LLFSATQ*
Sbjct: 417 *AVKEILPATNSAYSTTMAVILLF*DIIIKELAHFTEILPHAYTTADAYLSYLLFSATQ* 238
Query: 521 AYNLLHFMAWKFMPLHFINFNGILSFIVAVSAIKNFIAARSSYAASPSIMWTPIVHYPFL 342
AY+LL FMAWKFM IN N IL FIVAV AIKN IAAR SYAAS S+M T I+H L
Sbjct: 237 AYDLLQFMAWKFMSPRSINSNRIL*FIVAVPAIKNVIAARCSYAASSSVMCTSILH*SLL 58
Query: 341 KFLIVIRV*TIDLVCIV 291
K I+IRV TID C++
Sbjct: 57 KSFILIRVRTIDPGCVI 7
Score = 182 bits (391), Expect(2) = 1e-055
Identities = 87/135 (64%), Positives = 97/135 (71%)
Frame = +1 / +2
Query: 298 QTRSMVQTLMTMRNLRKG*CTMGVHIIEGDAA*ELLAAMKFLIADTATMKLRIPLKLIK* 477
Q SMV TLM+M++LR+ * +M VHI E DAA E LAAM FLIA TATM RI L+LI
Sbjct: 14 QPGSMVLTLMSMKDLRRD*WSMDVHITEEDAAYEHLAAMTFLIAGTATMNQRIRLELILL 193
Query: 478 RGMNFHAMKCSRLYAHCVALNRRCDKYVSIAVFAWGNTSVVCANSSTMMSLNSSITATDV 657
MNFHAM CSR YAHCVALN+R DKY S V+AWG+ SV CA+S MMS NSSITA V
Sbjct: 194 GDMNFHAMNCSRSYAHCVALNKRYDKYASAVVYAWGSISVKCASSLMMMSQNSSITAMVV 373
Query: 658 EYVESEGGRISSTVQ 702
EY E GRIS T Q
Sbjct: 374 EYAELVAGRISFTAQ 418
Score = 163 bits (350), Expect(2) = 1e-048
Identities = 84/136 (61%), Positives = 100/136 (73%)
Frame = +2 / +3
Query: 296 YRQDQWFKP**L*EI*ERDNALWVSTL*KEMPHKSSLLQ*NF*LPTLPQ*N*EFH*N**N 475
+ Q QWF **+*+I*E N +W+ TL K+MPH S+LLQ*+F*LP LPQ* EF *N* +
Sbjct: 12 HSQGQWF*L**V*KI*EGINGVWMCTLPKKMPHTSTLLQ*HF*LPALPQ*IKEFD*N*YS 191
Query: 476 EEA*TSTP*SAAGCMLIVWH*TGGATSMYQLRCLHGEILLWFVQTLRR*CL*TAVSLQRM 655
*TSTP*+AAG MLIVWH*T G T+M+QL C+HGE+ L VQ L *CL TAVSL +
Sbjct: 192 *AT*TSTP*TAAGHMLIVWH*TRGTTNMHQLWCMHGEVFL*SVQAL***CLKTAVSLPWL 371
Query: 656 WNM*NRREGEFLPLFK 703
WNM N +GEFL L K
Sbjct: 372 WNMQNWWQGEFLSLLK 419
Score = 81.7 bits (172), Expect(2) = 1e-095
Identities = 28/34 (82%), Positives = 28/34 (82%)
Frame = +3 / +2
Query: 690 FHCSKCGCCYSIALKNSHACVEGAMHHDCPICFE 791
F CGCCYS LKNSHACVEGAMHHDCPICFE
Sbjct: 407 FTAQXCGCCYSTVLKNSHACVEGAMHHDCPICFE 508
Score = 62.5 bits (130), Expect(2) = 1e-068
Identities = 25/29 (86%), Positives = 27/29 (93%)
Frame = -3 / -2
Query: 790 SKQIGQS*CIAPSTHA*LFFSAIE*QHPH 704
SKQIGQS*C+APSTHA*LFF +E*QHPH
Sbjct: 507 SKQIGQS*CMAPSTHA*LFFKTVE*QHPH 421
Score = 56.5 bits (117), Expect(2) = 5e-059
Identities = 22/29 (75%), Positives = 24/29 (82%)
Frame = -2 / -1
Query: 791 LEADWTVMMHRPFNTCMTILQRN*IATST 705
LEADWTVMMH FNTCMT+LQ + I TST
Sbjct: 508 LEADWTVMMHGSFNTCMTVLQNSRITTST 422
Score = 55.1 bits (114), Expect(2) = 1e-055
Identities = 25/35 (71%), Positives = 25/35 (71%)
Frame = +2 / +1
Query: 686 FLPLFKMWMLLFNCAEE*SCMC*RGDAS*LSNLLR 790
F MWMLLF C EE SCMC*R AS*LSNLLR
Sbjct: 403 FFHCSXMWMLLFYCFEEQSCMC*RSHAS*LSNLLR 507
Score = 54.2 bits (112), Expect(2) = 6e-057
Identities = 23/29 (79%), Positives = 24/29 (82%)
Frame = -1 / -3
Query: 792 TRSRLDSHDASPLQHMHDYSSAQLNSNIH 706
TRSRLDSHDA LQHMHD SS Q N+NIH
Sbjct: 509 TRSRLDSHDAWLLQHMHDCSSKQ*NNNIH 423
Score = 50.6 bits (104), Expect(2) = 1e-048
Identities = 25/38 (65%), Positives = 27/38 (71%)
Frame = +1 / +3
Query: 679 GRISSTVQNVDVAIQLR*RIVMHVLKGRCIMTVQSASS 792
G S ++ VDV I L *R VMHVLK CIMTVQSASS
Sbjct: 396 GEFLSLLKXVDVVILLF*RTVMHVLKEPCIMTVQSASS 509
>gb|BU971843.1|BU971843 HB19N11r BC Hordeum vulgare subsp. vulgare cDNA clone HB19N11
5-PRIME, mRNA sequence
Length = 633
Score = 286 bits (620), Expect(2) = 2e-079
Identities = 102/135 (75%), Positives = 118/135 (87%)
Frame = +3 / +2
Query: 294 NTDKINGSNPDDYEKFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDK 473
+T ++NGSN D+YE+FEKG+M YGC HYRRRCRIRAPCCN+IFDCRHCHNE+KNSI+ID
Sbjct: 227 DTARVNGSNSDEYERFEKGLMEYGCAHYRRRCRIRAPCCNDIFDCRHCHNESKNSIRIDT 406
Query: 474 MKRHELPRHEVQQVVCSLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHCNX 653
+RHELPRHE+QQV+CSLCGTEQEVRQ+CI+CGVCMGKYFC +CKLFDDDVSKQQYHC+
Sbjct: 407 PRRHELPRHELQQVICSLCGTEQEVRQICISCGVCMGKYFCEVCKLFDDDVSKQQYHCHG 586
Query: 654 XXXXXXXXXENFFHC 698
ENFFHC
Sbjct: 587 CGICRIGGRENFFHC 631
Score = 217 bits (469), Expect(2) = 1e-061
Identities = 89/117 (76%), Positives = 95/117 (81%)
Frame = -3 / -1
Query: 646 Q*YCCLETSSSKSLHKPQKYFPMQTPQLIHTCRTSCSVPHNEHTTCCTSWRGSSCLFILS 467
Q*YCC ETSSSKSLH QKYFPM TPQL+H CRTSCSVPHNEH TCC+SWRGSSC +S
Sbjct: 579 Q*YCCFETSSSKSLHTSQKYFPMHTPQLMHICRTSCSVPHNEHMTCCSSWRGSSCRLGVS 400
Query: 466 ILMEFLVSLWQCRQSKISLQQGALMRHLLL*CGHP*CIIPFSNFS*SSGFEPLILSV 296
IL+EF SLWQCRQSK+SLQQGA MRHLL *C HP I PFSN S SS EPL L+V
Sbjct: 399 ILIEFFDSLWQCRQSKMSLQQGARMRHLLR*CAHPYSINPFSNLSYSSELEPLTLAV 229
Score = 189 bits (408), Expect(3) = 6e-050
Identities = 84/134 (62%), Positives = 94/134 (70%)
Frame = -1 / -2
Query: 699 NSGRNSPSLRFYIFHIRCSDTAV*RHHRRRVCTNHRSISPCKHRN*YILVAPPVQCHTMS 520
+S RNSP +F IFH SDTAV RHH +R CT HR+ SPC H +* I V P VQCHTMS
Sbjct: 632 SSERNSPCHQFCIFHNHGSDTAVLRHHHQRACTLHRNTSPCIHHS*CIFVVPLVQCHTMS 453
Query: 519 IQPAALHGVEVHASSFYQF*WNS*FHCGSVGNQKFHCSKELLCGISFYNVDTHSALSLSQ 340
I PAA+HGVEVH + YQF* NS HCGS GNQK HCSK L+CGI F NV H+ L SQ
Sbjct: 452 I*PAAVHGVEVHVA*EYQF*SNSLIHCGSAGNQKCHCSKVLVCGIFFGNVHIHTPLIPSQ 273
Query: 339 ISHSHQGLNH*SCL 298
I H+HQ NH* L
Sbjct: 272 IFHTHQS*NH*PWL 231
Score = 186 bits (401), Expect = 1e-046
Identities = 87/135 (64%), Positives = 102/135 (75%)
Frame = -2 / -3
Query: 695 VEEILPPSDSTYSTSVAVILLFRDIIVEEFAQTTEVFPHANTAIDTYLSHLLFSATQ*AY 516
V+EILP ++S YST++AVILLF DII++E A TE+ PHA T D YLS+LLFSATQ*AY
Sbjct: 628 VKEILPATNSAYSTTMAVILLF*DIIIKELAHFTEILPHAYTTADAYLSYLLFSATQ*AY 449
Query: 515 NLLHFMAWKFMPLHFINFNGILSFIVAVSAIKNFIAARSSYAASPSIMWTPIVHYPFLKF 336
+LL FMAWKFM IN N IL FIVAV AIKN IAAR SYAAS S+M T I+H LK
Sbjct: 448 DLLQFMAWKFMSPRSINSNRIL*FIVAVPAIKNVIAARCSYAASSSVMCTSILH*SLLKS 269
Query: 335 LIVIRV*TIDLVCIV 291
I+IRV TID C++
Sbjct: 268 FILIRVRTIDPGCVI 224
Score = 179 bits (386), Expect(2) = 2e-046
Identities = 86/133 (64%), Positives = 96/133 (72%)
Frame = +1 / +3
Query: 298 QTRSMVQTLMTMRNLRKG*CTMGVHIIEGDAA*ELLAAMKFLIADTATMKLRIPLKLIK* 477
Q SMV TLM+M++LR+ * +M VHI E DAA E LAAM FLIA TATM RI L+LI
Sbjct: 231 QPGSMVLTLMSMKDLRRD*WSMDVHITEEDAAYEHLAAMTFLIAGTATMNQRIRLELILL 410
Query: 478 RGMNFHAMKCSRLYAHCVALNRRCDKYVSIAVFAWGNTSVVCANSSTMMSLNSSITATDV 657
MNFHAM CSR YAHCVALN+R DKY S V+AWG+ SV CA+S MMS NSSITA V
Sbjct: 411 GDMNFHAMNCSRSYAHCVALNKRYDKYASAVVYAWGSISVKCASSLMMMSQNSSITAMVV 590
Query: 658 EYVESEGGRISST 696
EY E GRIS T
Sbjct: 591 EYAELVAGRISFT 629
Score = 160 bits (345), Expect = 6e-039
Identities = 83/134 (61%), Positives = 99/134 (73%)
Frame = +2 / +1
Query: 296 YRQDQWFKP**L*EI*ERDNALWVSTL*KEMPHKSSLLQ*NF*LPTLPQ*N*EFH*N**N 475
+ Q QWF **+*+I*E N +W+ TL K+MPH S+LLQ*+F*LP LPQ* EF *N* +
Sbjct: 229 HSQGQWF*L**V*KI*EGINGVWMCTLPKKMPHTSTLLQ*HF*LPALPQ*IKEFD*N*YS 408
Query: 476 EEA*TSTP*SAAGCMLIVWH*TGGATSMYQLRCLHGEILLWFVQTLRR*CL*TAVSLQRM 655
*TSTP*+AAG MLIVWH*T G T+M+QL C+HGE+ L VQ L *CL TAVSL +
Sbjct: 409 *AT*TSTP*TAAGHMLIVWH*TRGTTNMHQLWCMHGEVFL*SVQAL***CLKTAVSLPWL 588
Query: 656 WNM*NRREGEFLPL 697
WNM N +GEFL L
Sbjct: 589 WNMQNWWQGEFLSL 630
Score = 39.6 bits (80), Expect(2) = 1e-061
Identities = 20/50 (40%), Positives = 30/50 (60%)
Frame = -2 / -3
Query: 293 VVSIRQQRALGIFL*LGLSMLSRSKVKV*VQGAHLDLCSQYKLSRCKHNT 144
V+SI+Q+RAL + + LS+ S ++ + G H+ KLS CKHNT
Sbjct: 229 VISIKQRRALRK*IHI*LSVCMLSSNRLKLHGTHVGCLVVQKLSPCKHNT 80
Score = 29.5 bits (58), Expect(2) = 2e-079
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +1 / +3
Query: 145 VLCLQRDSLYWEQRSRWAPWTYTLTLLLLN 234
VLCLQ DS ++ W P + +L LL ++
Sbjct: 81 VLCLQGDSFCTTKQPTWVPCSLSLLLLSMH 170
Score = 26.7 bits (52), Expect(2) = 2e-046
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = +3 / +2
Query: 144 CVVFAT**LVLGTKVKMGALDLHLDFASAQHGQAKLKEYAKSSLLSDGN 290
CVV A *L+ MGA+ L A H + + + L DGN
Sbjct: 80 CVVLARR*LLHYQTADMGAVQLESVAAQHAHAKLNMDSLPQGPSLFDGN 226
Score = 24.4 bits (47), Expect(3) = 6e-050
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -3 / -1
Query: 253 FNLACPC*AEAKSRC 209
F+LAC C*A S C
Sbjct: 183 FSLACAC*AATDSSC 139
Score = 22.1 bits (42), Expect(3) = 6e-050
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -1 / -2
Query: 294 CSFHQTTK 271
C FHQTTK
Sbjct: 230 CHFHQTTK 207
>gb|BF629044.2|BF629044 HVSMEb0009K16f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0009K16f, mRNA sequence
Length = 852
Score = 267 bits (577), Expect = 6e-071
Identities = 88/152 (57%), Positives = 112/152 (73%)
Frame = +3 / +3
Query: 336 KFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDKMKRHELPRHEVQQV 515
+ + G +GC HY RRCRIRAPCC E+F CRHCHN+ KNS+++D + RH++PRHE+ +V
Sbjct: 150 QMDLGAEQHGCEHYTRRCRIRAPCCGEVFGCRHCHNQAKNSLEVDVLDRHDIPRHEISKV 329
Query: 516 VCSLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHCNXXXXXXXXXXENFFH 695
+CSLC EQ+V++ C CG CMGKYFC C FDDD+SK QYHC+ +NFFH
Sbjct: 330 ICSLCNKEQDVQKNCSGCGACMGKYFCEKCNFFDDDISKNQYHCDGCGICRTGGMDNFFH 509
Query: 696 CSKCGCCYSIALKNSHACVEGAMHHDCPICFE 791
C KCGCCYS LK+SH CVE AMH +CP+C+E
Sbjct: 510 CEKCGCCYSNVLKDSHHCVERAMHQNCPVCYE 605
Score = 153 bits (329), Expect = 1e-036
Identities = 77/148 (52%), Positives = 81/148 (54%)
Frame = -3 / -3
Query: 784 QIGQS*CIAPSTHA*LFFSAIE*QHPHFEQWKKFSXXXXXXXXXXLQ*YCCLETSSSKSL 605
Q GQ *CIA ST * F + *QHPHF QWKK S Q*Y E SSSK L
Sbjct: 598 QTGQF*CIALSTQ**ESFKTLL*QHPHFSQWKKLSMPPVLQMPHPSQ*YWFFEISSSKKL 419
Query: 604 HKPQKYFPMQTPQLIHTCRTSCSVPHNEHTTCCTSWRGSSCLFILSILMEFLVSLWQCRQ 425
H QKYFPM PQ TSCS+ E T SWRG SC S EFL LWQCRQ
Sbjct: 418 HFSQKYFPMHAPQPEQFFCTSCSLLQREQMTLLISWRGMSCRSRTSTSSEFLAWLWQCRQ 239
Query: 424 SKISLQQGALMRHLLL*CGHP*CIIPFS 341
K S QQGA + HLL+*C P C P S
Sbjct: 238 PKTSPQQGARILHLLV*CSQPCCSAPKS 155
Score = 110 bits (235), Expect = 9e-024
Identities = 58/148 (39%), Positives = 82/148 (55%)
Frame = -2 / -2
Query: 791 LEADWTVMMHRPFNTCMTILQRN*IATSTF*TVEEILPPSDSTYSTSVAVILLFRDIIVE 612
L AD V+MH T M +LQ +AT F VEEI+ + S + S+AVIL+ DIIV+
Sbjct: 605 LVADRAVLMHCSLYTMMRVLQNIAVATPAFFAVEEIVHATSSADAASIAVILVL*DIIVK 426
Query: 611 EFAQTTEVFPHANTAIDTYLSHLLFSATQ*AYNLLHFMAWKFMPLHFINFNGILSFIVAV 432
E A TEVFPHA L H+LF + A +L F+A +P+ ++ ILS +VA+
Sbjct: 425 EVAFFTEVFPHACPTTGAVLLHILFFVAERADDLADFVAGDVVPVEDVHLERILSLVVAM 246
Query: 431 SAIKNFIAARSSYAASPSIMWTPIVHYP 348
A ++ AA Y A P +M ++ P
Sbjct: 245 PAAEDLAAAGRPYPAPPRVMLAAVLLCP 162
>gb|BG343770.2|BG343770 HVSMEg0006L08f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0006L08f, mRNA sequence
Length = 996
Score = 267 bits (577), Expect = 6e-071
Identities = 88/152 (57%), Positives = 112/152 (73%)
Frame = +3 / +2
Query: 336 KFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDKMKRHELPRHEVQQV 515
+ + G +GC HY RRCRIRAPCC E+F CRHCHN+ KNS+++D + RH++PRHE+ +V
Sbjct: 119 QMDLGAEQHGCEHYTRRCRIRAPCCGEVFGCRHCHNQAKNSLEVDVLDRHDIPRHEISKV 298
Query: 516 VCSLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHCNXXXXXXXXXXENFFH 695
+CSLC EQ+V++ C CG CMGKYFC C FDDD+SK QYHC+ +NFFH
Sbjct: 299 ICSLCNKEQDVQKNCSGCGACMGKYFCEKCNFFDDDISKNQYHCDGCGICRTGGMDNFFH 478
Query: 696 CSKCGCCYSIALKNSHACVEGAMHHDCPICFE 791
C KCGCCYS LK+SH CVE AMH +CP+C+E
Sbjct: 479 CEKCGCCYSNVLKDSHHCVERAMHQNCPVCYE 574
Score = 153 bits (329), Expect = 1e-036
Identities = 77/148 (52%), Positives = 81/148 (54%)
Frame = -3 / -1
Query: 784 QIGQS*CIAPSTHA*LFFSAIE*QHPHFEQWKKFSXXXXXXXXXXLQ*YCCLETSSSKSL 605
Q GQ *CIA ST * F + *QHPHF QWKK S Q*Y E SSSK L
Sbjct: 567 QTGQF*CIALSTQ**ESFKTLL*QHPHFSQWKKLSMPPVLQMPHPSQ*YWFFEISSSKKL 388
Query: 604 HKPQKYFPMQTPQLIHTCRTSCSVPHNEHTTCCTSWRGSSCLFILSILMEFLVSLWQCRQ 425
H QKYFPM PQ TSCS+ E T SWRG SC S EFL LWQCRQ
Sbjct: 387 HFSQKYFPMHAPQPEQFFCTSCSLLQREQMTLLISWRGMSCRSRTSTSSEFLAWLWQCRQ 208
Query: 424 SKISLQQGALMRHLLL*CGHP*CIIPFS 341
K S QQGA + HLL+*C P C P S
Sbjct: 207 PKTSPQQGARILHLLV*CSQPCCSAPKS 124
Score = 110 bits (235), Expect = 9e-024
Identities = 58/148 (39%), Positives = 82/148 (55%)
Frame = -2 / -3
Query: 791 LEADWTVMMHRPFNTCMTILQRN*IATSTF*TVEEILPPSDSTYSTSVAVILLFRDIIVE 612
L AD V+MH T M +LQ +AT F VEEI+ + S + S+AVIL+ DIIV+
Sbjct: 574 LVADRAVLMHCSLYTMMRVLQNIAVATPAFFAVEEIVHATSSADAASIAVILVL*DIIVK 395
Query: 611 EFAQTTEVFPHANTAIDTYLSHLLFSATQ*AYNLLHFMAWKFMPLHFINFNGILSFIVAV 432
E A TEVFPHA L H+LF + A +L F+A +P+ ++ ILS +VA+
Sbjct: 394 EVAFFTEVFPHACPTTGAVLLHILFFVAERADDLADFVAGDVVPVEDVHLERILSLVVAM 215
Query: 431 SAIKNFIAARSSYAASPSIMWTPIVHYP 348
A ++ AA Y A P +M ++ P
Sbjct: 214 PAAEDLAAAGRPYPAPPRVMLAAVLLCP 131
>gb|AV923368.1|AV923368 AV923368 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd12n20 5', mRNA sequence
Length = 645
Score = 267 bits (577), Expect = 6e-071
Identities = 88/152 (57%), Positives = 112/152 (73%)
Frame = +3 / +1
Query: 336 KFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDKMKRHELPRHEVQQV 515
+ + G +GC HY RRCRIRAPCC E+F CRHCHN+ KNS+++D + RH++PRHE+ +V
Sbjct: 169 QMDLGAEQHGCEHYTRRCRIRAPCCGEVFGCRHCHNQAKNSLEVDVLDRHDIPRHEISKV 348
Query: 516 VCSLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHCNXXXXXXXXXXENFFH 695
+CSLC EQ+V++ C CG CMGKYFC C FDDD+SK QYHC+ +NFFH
Sbjct: 349 ICSLCNKEQDVQKNCSGCGACMGKYFCEKCNFFDDDISKNQYHCDGCGICRTGGMDNFFH 528
Query: 696 CSKCGCCYSIALKNSHACVEGAMHHDCPICFE 791
C KCGCCYS LK+SH CVE AMH +CP+C+E
Sbjct: 529 CEKCGCCYSNVLKDSHHCVERAMHQNCPVCYE 624
Score = 153 bits (329), Expect = 1e-036
Identities = 77/148 (52%), Positives = 81/148 (54%)
Frame = -3 / -2
Query: 784 QIGQS*CIAPSTHA*LFFSAIE*QHPHFEQWKKFSXXXXXXXXXXLQ*YCCLETSSSKSL 605
Q GQ *CIA ST * F + *QHPHF QWKK S Q*Y E SSSK L
Sbjct: 617 QTGQF*CIALSTQ**ESFKTLL*QHPHFSQWKKLSMPPVLQMPHPSQ*YWFFEISSSKKL 438
Query: 604 HKPQKYFPMQTPQLIHTCRTSCSVPHNEHTTCCTSWRGSSCLFILSILMEFLVSLWQCRQ 425
H QKYFPM PQ TSCS+ E T SWRG SC S EFL LWQCRQ
Sbjct: 437 HFSQKYFPMHAPQPEQFFCTSCSLLQREQMTLLISWRGMSCRSRTSTSSEFLAWLWQCRQ 258
Query: 424 SKISLQQGALMRHLLL*CGHP*CIIPFS 341
K S QQGA + HLL+*C P C P S
Sbjct: 257 PKTSPQQGARILHLLV*CSQPCCSAPKS 174
Score = 110 bits (235), Expect = 9e-024
Identities = 58/148 (39%), Positives = 82/148 (55%)
Frame = -2 / -1
Query: 791 LEADWTVMMHRPFNTCMTILQRN*IATSTF*TVEEILPPSDSTYSTSVAVILLFRDIIVE 612
L AD V+MH T M +LQ +AT F VEEI+ + S + S+AVIL+ DIIV+
Sbjct: 624 LVADRAVLMHCSLYTMMRVLQNIAVATPAFFAVEEIVHATSSADAASIAVILVL*DIIVK 445
Query: 611 EFAQTTEVFPHANTAIDTYLSHLLFSATQ*AYNLLHFMAWKFMPLHFINFNGILSFIVAV 432
E A TEVFPHA L H+LF + A +L F+A +P+ ++ ILS +VA+
Sbjct: 444 EVAFFTEVFPHACPTTGAVLLHILFFVAERADDLADFVAGDVVPVEDVHLERILSLVVAM 265
Query: 431 SAIKNFIAARSSYAASPSIMWTPIVHYP 348
A ++ AA Y A P +M ++ P
Sbjct: 264 PAAEDLAAAGRPYPAPPRVMLAAVLLCP 181
>gb|AV927080.1|AV927080 AV927080 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd26k21 5', mRNA sequence
Length = 605
Score = 267 bits (577), Expect = 6e-071
Identities = 88/152 (57%), Positives = 112/152 (73%)
Frame = +3 / +2
Query: 336 KFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDKMKRHELPRHEVQQV 515
+ + G +GC HY RRCRIRAPCC E+F CRHCHN+ KNS+++D + RH++PRHE+ +V
Sbjct: 134 QMDLGAEQHGCEHYTRRCRIRAPCCGEVFGCRHCHNQAKNSLEVDVLDRHDIPRHEISKV 313
Query: 516 VCSLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHCNXXXXXXXXXXENFFH 695
+CSLC EQ+V++ C CG CMGKYFC C FDDD+SK QYHC+ +NFFH
Sbjct: 314 ICSLCNKEQDVQKNCSGCGACMGKYFCEKCNFFDDDISKNQYHCDGCGICRTGGMDNFFH 493
Query: 696 CSKCGCCYSIALKNSHACVEGAMHHDCPICFE 791
C KCGCCYS LK+SH CVE AMH +CP+C+E
Sbjct: 494 CEKCGCCYSNVLKDSHHCVERAMHQNCPVCYE 589
Score = 153 bits (329), Expect = 1e-036
Identities = 77/148 (52%), Positives = 81/148 (54%)
Frame = -3 / -3
Query: 784 QIGQS*CIAPSTHA*LFFSAIE*QHPHFEQWKKFSXXXXXXXXXXLQ*YCCLETSSSKSL 605
Q GQ *CIA ST * F + *QHPHF QWKK S Q*Y E SSSK L
Sbjct: 582 QTGQF*CIALSTQ**ESFKTLL*QHPHFSQWKKLSMPPVLQMPHPSQ*YWFFEISSSKKL 403
Query: 604 HKPQKYFPMQTPQLIHTCRTSCSVPHNEHTTCCTSWRGSSCLFILSILMEFLVSLWQCRQ 425
H QKYFPM PQ TSCS+ E T SWRG SC S EFL LWQCRQ
Sbjct: 402 HFSQKYFPMHAPQPEQFFCTSCSLLQREQMTLLISWRGMSCRSRTSTSSEFLAWLWQCRQ 223
Query: 424 SKISLQQGALMRHLLL*CGHP*CIIPFS 341
K S QQGA + HLL+*C P C P S
Sbjct: 222 PKTSPQQGARILHLLV*CSQPCCSAPKS 139
Score = 110 bits (235), Expect = 9e-024
Identities = 58/148 (39%), Positives = 82/148 (55%)
Frame = -2 / -2
Query: 791 LEADWTVMMHRPFNTCMTILQRN*IATSTF*TVEEILPPSDSTYSTSVAVILLFRDIIVE 612
L AD V+MH T M +LQ +AT F VEEI+ + S + S+AVIL+ DIIV+
Sbjct: 589 LVADRAVLMHCSLYTMMRVLQNIAVATPAFFAVEEIVHATSSADAASIAVILVL*DIIVK 410
Query: 611 EFAQTTEVFPHANTAIDTYLSHLLFSATQ*AYNLLHFMAWKFMPLHFINFNGILSFIVAV 432
E A TEVFPHA L H+LF + A +L F+A +P+ ++ ILS +VA+
Sbjct: 409 EVAFFTEVFPHACPTTGAVLLHILFFVAERADDLADFVAGDVVPVEDVHLERILSLVVAM 230
Query: 431 SAIKNFIAARSSYAASPSIMWTPIVHYP 348
A ++ AA Y A P +M ++ P
Sbjct: 229 PAAEDLAAAGRPYPAPPRVMLAAVLLCP 146
>gb|BQ465500.1|BQ465500 HU03N03r HU Hordeum vulgare subsp. vulgare cDNA clone HU03N03
5-PRIME, mRNA sequence
Length = 575
Score = 267 bits (577), Expect = 6e-071
Identities = 88/152 (57%), Positives = 112/152 (73%)
Frame = +3 / +1
Query: 336 KFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDKMKRHELPRHEVQQV 515
+ + G +GC HY RRCRIRAPCC E+F CRHCHN+ KNS+++D + RH++PRHE+ +V
Sbjct: 52 QMDLGAEQHGCEHYTRRCRIRAPCCGEVFGCRHCHNQAKNSLEVDVLDRHDIPRHEISKV 231
Query: 516 VCSLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHCNXXXXXXXXXXENFFH 695
+CSLC EQ+V++ C CG CMGKYFC C FDDD+SK QYHC+ +NFFH
Sbjct: 232 ICSLCNKEQDVQKNCSGCGACMGKYFCEKCNFFDDDISKNQYHCDGCGICRTGGMDNFFH 411
Query: 696 CSKCGCCYSIALKNSHACVEGAMHHDCPICFE 791
C KCGCCYS LK+SH CVE AMH +CP+C+E
Sbjct: 412 CEKCGCCYSNVLKDSHHCVERAMHQNCPVCYE 507
Score = 153 bits (329), Expect = 1e-036
Identities = 77/148 (52%), Positives = 81/148 (54%)
Frame = -3 / -1
Query: 784 QIGQS*CIAPSTHA*LFFSAIE*QHPHFEQWKKFSXXXXXXXXXXLQ*YCCLETSSSKSL 605
Q GQ *CIA ST * F + *QHPHF QWKK S Q*Y E SSSK L
Sbjct: 500 QTGQF*CIALSTQ**ESFKTLL*QHPHFSQWKKLSMPPVLQMPHPSQ*YWFFEISSSKKL 321
Query: 604 HKPQKYFPMQTPQLIHTCRTSCSVPHNEHTTCCTSWRGSSCLFILSILMEFLVSLWQCRQ 425
H QKYFPM PQ TSCS+ E T SWRG SC S EFL LWQCRQ
Sbjct: 320 HFSQKYFPMHAPQPEQFFCTSCSLLQREQMTLLISWRGMSCRSRTSTSSEFLAWLWQCRQ 141
Query: 424 SKISLQQGALMRHLLL*CGHP*CIIPFS 341
K S QQGA + HLL+*C P C P S
Sbjct: 140 PKTSPQQGARILHLLV*CSQPCCSAPKS 57
Score = 110 bits (235), Expect = 9e-024
Identities = 58/148 (39%), Positives = 82/148 (55%)
Frame = -2 / -3
Query: 791 LEADWTVMMHRPFNTCMTILQRN*IATSTF*TVEEILPPSDSTYSTSVAVILLFRDIIVE 612
L AD V+MH T M +LQ +AT F VEEI+ + S + S+AVIL+ DIIV+
Sbjct: 507 LVADRAVLMHCSLYTMMRVLQNIAVATPAFFAVEEIVHATSSADAASIAVILVL*DIIVK 328
Query: 611 EFAQTTEVFPHANTAIDTYLSHLLFSATQ*AYNLLHFMAWKFMPLHFINFNGILSFIVAV 432
E A TEVFPHA L H+LF + A +L F+A +P+ ++ ILS +VA+
Sbjct: 327 EVAFFTEVFPHACPTTGAVLLHILFFVAERADDLADFVAGDVVPVEDVHLERILSLVVAM 148
Query: 431 SAIKNFIAARSSYAASPSIMWTPIVHYP 348
A ++ AA Y A P +M ++ P
Sbjct: 147 PAAEDLAAAGRPYPAPPRVMLAAVLLCP 64
>gb|CA007573.1|CA007573 HU08G03r HU Hordeum vulgare subsp. vulgare cDNA clone HU08G03
5-PRIME, mRNA sequence
Length = 592
Score = 267 bits (577), Expect = 6e-071
Identities = 88/152 (57%), Positives = 112/152 (73%)
Frame = +3 / +1
Query: 336 KFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDKMKRHELPRHEVQQV 515
+ + G +GC HY RRCRIRAPCC E+F CRHCHN+ KNS+++D + RH++PRHE+ +V
Sbjct: 124 QMDLGAEQHGCEHYTRRCRIRAPCCGEVFGCRHCHNQAKNSLEVDVLDRHDIPRHEISKV 303
Query: 516 VCSLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHCNXXXXXXXXXXENFFH 695
+CSLC EQ+V++ C CG CMGKYFC C FDDD+SK QYHC+ +NFFH
Sbjct: 304 ICSLCNKEQDVQKNCSGCGACMGKYFCEKCNFFDDDISKNQYHCDGCGICRTGGMDNFFH 483
Query: 696 CSKCGCCYSIALKNSHACVEGAMHHDCPICFE 791
C KCGCCYS LK+SH CVE AMH +CP+C+E
Sbjct: 484 CEKCGCCYSNVLKDSHHCVERAMHQNCPVCYE 579
Score = 153 bits (329), Expect = 1e-036
Identities = 77/148 (52%), Positives = 81/148 (54%)
Frame = -3 / -3
Query: 784 QIGQS*CIAPSTHA*LFFSAIE*QHPHFEQWKKFSXXXXXXXXXXLQ*YCCLETSSSKSL 605
Q GQ *CIA ST * F + *QHPHF QWKK S Q*Y E SSSK L
Sbjct: 572 QTGQF*CIALSTQ**ESFKTLL*QHPHFSQWKKLSMPPVLQMPHPSQ*YWFFEISSSKKL 393
Query: 604 HKPQKYFPMQTPQLIHTCRTSCSVPHNEHTTCCTSWRGSSCLFILSILMEFLVSLWQCRQ 425
H QKYFPM PQ TSCS+ E T SWRG SC S EFL LWQCRQ
Sbjct: 392 HFSQKYFPMHAPQPEQFFCTSCSLLQREQMTLLISWRGMSCRSRTSTSSEFLAWLWQCRQ 213
Query: 424 SKISLQQGALMRHLLL*CGHP*CIIPFS 341
K S QQGA + HLL+*C P C P S
Sbjct: 212 PKTSPQQGARILHLLV*CSQPCCSAPKS 129
Score = 110 bits (235), Expect = 9e-024
Identities = 58/148 (39%), Positives = 82/148 (55%)
Frame = -2 / -2
Query: 791 LEADWTVMMHRPFNTCMTILQRN*IATSTF*TVEEILPPSDSTYSTSVAVILLFRDIIVE 612
L AD V+MH T M +LQ +AT F VEEI+ + S + S+AVIL+ DIIV+
Sbjct: 579 LVADRAVLMHCSLYTMMRVLQNIAVATPAFFAVEEIVHATSSADAASIAVILVL*DIIVK 400
Query: 611 EFAQTTEVFPHANTAIDTYLSHLLFSATQ*AYNLLHFMAWKFMPLHFINFNGILSFIVAV 432
E A TEVFPHA L H+LF + A +L F+A +P+ ++ ILS +VA+
Sbjct: 399 EVAFFTEVFPHACPTTGAVLLHILFFVAERADDLADFVAGDVVPVEDVHLERILSLVVAM 220
Query: 431 SAIKNFIAARSSYAASPSIMWTPIVHYP 348
A ++ AA Y A P +M ++ P
Sbjct: 219 PAAEDLAAAGRPYPAPPRVMLAAVLLCP 136
>gb|CA008104.1|CA008104 HU09O15r HU Hordeum vulgare subsp. vulgare cDNA clone HU09O15
5-PRIME, mRNA sequence
Length = 651
Score = 267 bits (577), Expect = 6e-071
Identities = 88/152 (57%), Positives = 112/152 (73%)
Frame = +3 / +2
Query: 336 KFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDKMKRHELPRHEVQQV 515
+ + G +GC HY RRCRIRAPCC E+F CRHCHN+ KNS+++D + RH++PRHE+ +V
Sbjct: 158 QMDLGAEQHGCEHYTRRCRIRAPCCGEVFGCRHCHNQAKNSLEVDVLDRHDIPRHEISKV 337
Query: 516 VCSLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHCNXXXXXXXXXXENFFH 695
+CSLC EQ+V++ C CG CMGKYFC C FDDD+SK QYHC+ +NFFH
Sbjct: 338 ICSLCNKEQDVQKNCSGCGACMGKYFCEKCNFFDDDISKNQYHCDGCGICRTGGMDNFFH 517
Query: 696 CSKCGCCYSIALKNSHACVEGAMHHDCPICFE 791
C KCGCCYS LK+SH CVE AMH +CP+C+E
Sbjct: 518 CEKCGCCYSNVLKDSHHCVERAMHQNCPVCYE 613
Score = 153 bits (329), Expect = 1e-036
Identities = 77/148 (52%), Positives = 81/148 (54%)
Frame = -3 / -1
Query: 784 QIGQS*CIAPSTHA*LFFSAIE*QHPHFEQWKKFSXXXXXXXXXXLQ*YCCLETSSSKSL 605
Q GQ *CIA ST * F + *QHPHF QWKK S Q*Y E SSSK L
Sbjct: 606 QTGQF*CIALSTQ**ESFKTLL*QHPHFSQWKKLSMPPVLQMPHPSQ*YWFFEISSSKKL 427
Query: 604 HKPQKYFPMQTPQLIHTCRTSCSVPHNEHTTCCTSWRGSSCLFILSILMEFLVSLWQCRQ 425
H QKYFPM PQ TSCS+ E T SWRG SC S EFL LWQCRQ
Sbjct: 426 HFSQKYFPMHAPQPEQFFCTSCSLLQREQMTLLISWRGMSCRSRTSTSSEFLAWLWQCRQ 247
Query: 424 SKISLQQGALMRHLLL*CGHP*CIIPFS 341
K S QQGA + HLL+*C P C P S
Sbjct: 246 PKTSPQQGARILHLLV*CSQPCCSAPKS 163
Score = 110 bits (235), Expect = 9e-024
Identities = 58/148 (39%), Positives = 82/148 (55%)
Frame = -2 / -3
Query: 791 LEADWTVMMHRPFNTCMTILQRN*IATSTF*TVEEILPPSDSTYSTSVAVILLFRDIIVE 612
L AD V+MH T M +LQ +AT F VEEI+ + S + S+AVIL+ DIIV+
Sbjct: 613 LVADRAVLMHCSLYTMMRVLQNIAVATPAFFAVEEIVHATSSADAASIAVILVL*DIIVK 434
Query: 611 EFAQTTEVFPHANTAIDTYLSHLLFSATQ*AYNLLHFMAWKFMPLHFINFNGILSFIVAV 432
E A TEVFPHA L H+LF + A +L F+A +P+ ++ ILS +VA+
Sbjct: 433 EVAFFTEVFPHACPTTGAVLLHILFFVAERADDLADFVAGDVVPVEDVHLERILSLVVAM 254
Query: 431 SAIKNFIAARSSYAASPSIMWTPIVHYP 348
A ++ AA Y A P +M ++ P
Sbjct: 253 PAAEDLAAAGRPYPAPPRVMLAAVLLCP 170
>gb|BQ466698.1|BQ466698 HS01E20T HS Hordeum vulgare subsp. vulgare cDNA clone HS01E20
5-PRIME, mRNA sequence
Length = 583
Score = 265 bits (573), Expect = 2e-070
Identities = 87/144 (60%), Positives = 109/144 (75%)
Frame = +3 / +2
Query: 360 YGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDKMKRHELPRHEVQQVVCSLCGTE 539
+GC HY RRCRIRAPCC E+F CRHCHN+ KNS+++D + RH++PRHE+ +V+CSLC E
Sbjct: 11 HGCEHYTRRCRIRAPCCGEVFGCRHCHNQAKNSLEVDVLDRHDIPRHEISKVICSLCNKE 190
Query: 540 QEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHCNXXXXXXXXXXENFFHCSKCGCCY 719
Q+V++ C CG CMGKYFC C FDDD+SK QYHC+ +NFFHC KCGCCY
Sbjct: 191 QDVQKNCSGCGACMGKYFCEKCNFFDDDISKNQYHCDGCGICRTGGMDNFFHCEKCGCCY 370
Query: 720 SIALKNSHACVEGAMHHDCPICFE 791
S LK+SH CVE AMH +CP+C+E
Sbjct: 371 SNVLKDSHHCVERAMHQNCPVCYE 442
Score = 149 bits (319), Expect = 2e-035
Identities = 74/141 (52%), Positives = 78/141 (55%)
Frame = -3 / -2
Query: 784 QIGQS*CIAPSTHA*LFFSAIE*QHPHFEQWKKFSXXXXXXXXXXLQ*YCCLETSSSKSL 605
Q GQ *CIA ST * F + *QHPHF QWKK S Q*Y E SSSK L
Sbjct: 435 QTGQF*CIALSTQ**ESFKTLL*QHPHFSQWKKLSMPPVLQMPHPSQ*YWFFEISSSKKL 256
Query: 604 HKPQKYFPMQTPQLIHTCRTSCSVPHNEHTTCCTSWRGSSCLFILSILMEFLVSLWQCRQ 425
H QKYFPM PQ TSCS+ E T SWRG SC S EFL LWQCRQ
Sbjct: 255 HFSQKYFPMHAPQPEQFFCTSCSLLQREQMTLLISWRGMSCRSRTSTSSEFLAWLWQCRQ 76
Query: 424 SKISLQQGALMRHLLL*CGHP 362
K S QQGA + HLL+*C P
Sbjct: 75 PKTSPQQGARILHLLV*CSQP 13
Score = 109 bits (232), Expect = 2e-023
Identities = 57/140 (40%), Positives = 79/140 (56%)
Frame = -2 / -1
Query: 791 LEADWTVMMHRPFNTCMTILQRN*IATSTF*TVEEILPPSDSTYSTSVAVILLFRDIIVE 612
L AD V+MH T M +LQ +AT F VEEI+ + S + S+AVIL+ DIIV+
Sbjct: 442 LVADRAVLMHCSLYTMMRVLQNIAVATPAFFAVEEIVHATSSADAASIAVILVL*DIIVK 263
Query: 611 EFAQTTEVFPHANTAIDTYLSHLLFSATQ*AYNLLHFMAWKFMPLHFINFNGILSFIVAV 432
E A TEVFPHA L H+LF + A +L F+A +P+ ++ ILS +VA+
Sbjct: 262 EVAFFTEVFPHACPTTGAVLLHILFFVAERADDLADFVAGDVVPVEDVHLERILSLVVAM 83
Query: 431 SAIKNFIAARSSYAASPSIM 372
A ++ AA Y A P +M
Sbjct: 82 PAAEDLAAAGRPYPAPPRVM 23
>gb|BQ467017.1|BQ467017 HS02E20r HS Hordeum vulgare subsp. vulgare cDNA clone HS02E20
5-PRIME, mRNA sequence
Length = 587
Score = 265 bits (573), Expect = 2e-070
Identities = 87/144 (60%), Positives = 109/144 (75%)
Frame = +3 / +2
Query: 360 YGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDKMKRHELPRHEVQQVVCSLCGTE 539
+GC HY RRCRIRAPCC E+F CRHCHN+ KNS+++D + RH++PRHE+ +V+CSLC E
Sbjct: 11 HGCEHYTRRCRIRAPCCGEVFGCRHCHNQAKNSLEVDVLDRHDIPRHEISKVICSLCNKE 190
Query: 540 QEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHCNXXXXXXXXXXENFFHCSKCGCCY 719
Q+V++ C CG CMGKYFC C FDDD+SK QYHC+ +NFFHC KCGCCY
Sbjct: 191 QDVQKNCSGCGACMGKYFCEKCNFFDDDISKNQYHCDGCGICRTGGMDNFFHCEKCGCCY 370
Query: 720 SIALKNSHACVEGAMHHDCPICFE 791
S LK+SH CVE AMH +CP+C+E
Sbjct: 371 SNVLKDSHHCVERAMHQNCPVCYE 442
Score = 149 bits (319), Expect = 2e-035
Identities = 74/141 (52%), Positives = 78/141 (55%)
Frame = -3 / -3
Query: 784 QIGQS*CIAPSTHA*LFFSAIE*QHPHFEQWKKFSXXXXXXXXXXLQ*YCCLETSSSKSL 605
Q GQ *CIA ST * F + *QHPHF QWKK S Q*Y E SSSK L
Sbjct: 435 QTGQF*CIALSTQ**ESFKTLL*QHPHFSQWKKLSMPPVLQMPHPSQ*YWFFEISSSKKL 256
Query: 604 HKPQKYFPMQTPQLIHTCRTSCSVPHNEHTTCCTSWRGSSCLFILSILMEFLVSLWQCRQ 425
H QKYFPM PQ TSCS+ E T SWRG SC S EFL LWQCRQ
Sbjct: 255 HFSQKYFPMHAPQPEQFFCTSCSLLQREQMTLLISWRGMSCRSRTSTSSEFLAWLWQCRQ 76
Query: 424 SKISLQQGALMRHLLL*CGHP 362
K S QQGA + HLL+*C P
Sbjct: 75 PKTSPQQGARILHLLV*CSQP 13
Score = 109 bits (232), Expect = 2e-023
Identities = 57/140 (40%), Positives = 79/140 (56%)
Frame = -2 / -2
Query: 791 LEADWTVMMHRPFNTCMTILQRN*IATSTF*TVEEILPPSDSTYSTSVAVILLFRDIIVE 612
L AD V+MH T M +LQ +AT F VEEI+ + S + S+AVIL+ DIIV+
Sbjct: 442 LVADRAVLMHCSLYTMMRVLQNIAVATPAFFAVEEIVHATSSADAASIAVILVL*DIIVK 263
Query: 611 EFAQTTEVFPHANTAIDTYLSHLLFSATQ*AYNLLHFMAWKFMPLHFINFNGILSFIVAV 432
E A TEVFPHA L H+LF + A +L F+A +P+ ++ ILS +VA+
Sbjct: 262 EVAFFTEVFPHACPTTGAVLLHILFFVAERADDLADFVAGDVVPVEDVHLERILSLVVAM 83
Query: 431 SAIKNFIAARSSYAASPSIM 372
A ++ AA Y A P +M
Sbjct: 82 PAAEDLAAAGRPYPAPPRVM 23
>gb|CA002379.1|CA002379 HS07F02r HS Hordeum vulgare subsp. vulgare cDNA clone HS07F02
5-PRIME, mRNA sequence
Length = 503
Score = 265 bits (573), Expect = 2e-070
Identities = 87/144 (60%), Positives = 109/144 (75%)
Frame = +3 / +2
Query: 360 YGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDKMKRHELPRHEVQQVVCSLCGTE 539
+GC HY RRCRIRAPCC E+F CRHCHN+ KNS+++D + RH++PRHE+ +V+CSLC E
Sbjct: 11 HGCEHYTRRCRIRAPCCGEVFGCRHCHNQAKNSLEVDVLDRHDIPRHEISKVICSLCNKE 190
Query: 540 QEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHCNXXXXXXXXXXENFFHCSKCGCCY 719
Q+V++ C CG CMGKYFC C FDDD+SK QYHC+ +NFFHC KCGCCY
Sbjct: 191 QDVQKNCSGCGACMGKYFCEKCNFFDDDISKNQYHCDGCGICRTGGMDNFFHCEKCGCCY 370
Query: 720 SIALKNSHACVEGAMHHDCPICFE 791
S LK+SH CVE AMH +CP+C+E
Sbjct: 371 SNVLKDSHHCVERAMHQNCPVCYE 442
Score = 149 bits (319), Expect = 2e-035
Identities = 74/141 (52%), Positives = 78/141 (55%)
Frame = -3 / -3
Query: 784 QIGQS*CIAPSTHA*LFFSAIE*QHPHFEQWKKFSXXXXXXXXXXLQ*YCCLETSSSKSL 605
Q GQ *CIA ST * F + *QHPHF QWKK S Q*Y E SSSK L
Sbjct: 435 QTGQF*CIALSTQ**ESFKTLL*QHPHFSQWKKLSMPPVLQMPHPSQ*YWFFEISSSKKL 256
Query: 604 HKPQKYFPMQTPQLIHTCRTSCSVPHNEHTTCCTSWRGSSCLFILSILMEFLVSLWQCRQ 425
H QKYFPM PQ TSCS+ E T SWRG SC S EFL LWQCRQ
Sbjct: 255 HFSQKYFPMHAPQPEQFFCTSCSLLQREQMTLLISWRGMSCRSRTSTSSEFLAWLWQCRQ 76
Query: 424 SKISLQQGALMRHLLL*CGHP 362
K S QQGA + HLL+*C P
Sbjct: 75 PKTSPQQGARILHLLV*CSQP 13
Score = 109 bits (232), Expect = 2e-023
Identities = 57/140 (40%), Positives = 79/140 (56%)
Frame = -2 / -2
Query: 791 LEADWTVMMHRPFNTCMTILQRN*IATSTF*TVEEILPPSDSTYSTSVAVILLFRDIIVE 612
L AD V+MH T M +LQ +AT F VEEI+ + S + S+AVIL+ DIIV+
Sbjct: 442 LVADRAVLMHCSLYTMMRVLQNIAVATPAFFAVEEIVHATSSADAASIAVILVL*DIIVK 263
Query: 611 EFAQTTEVFPHANTAIDTYLSHLLFSATQ*AYNLLHFMAWKFMPLHFINFNGILSFIVAV 432
E A TEVFPHA L H+LF + A +L F+A +P+ ++ ILS +VA+
Sbjct: 262 EVAFFTEVFPHACPTTGAVLLHILFFVAERADDLADFVAGDVVPVEDVHLERILSLVVAM 83
Query: 431 SAIKNFIAARSSYAASPSIM 372
A ++ AA Y A P +M
Sbjct: 82 PAAEDLAAAGRPYPAPPRVM 23
>gb|CA008721.1|CA008721 HU11O06r HU Hordeum vulgare subsp. vulgare cDNA clone HU11O06
5-PRIME, mRNA sequence
Length = 610
Score = 264 bits (572), Expect = 3e-070
Identities = 87/151 (57%), Positives = 111/151 (73%)
Frame = +3 / +2
Query: 336 KFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDKMKRHELPRHEVQQV 515
+ + G +GC HY RRCRIRAPCC E+F CRHCHN+ KNS+++D + RH++PRHE+ +V
Sbjct: 158 QMDLGAEQHGCEHYTRRCRIRAPCCGEVFGCRHCHNQAKNSLEVDVLDRHDIPRHEISKV 337
Query: 516 VCSLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHCNXXXXXXXXXXENFFH 695
+CSLC EQ+V++ C CG CMGKYFC C FDDD+SK QYHC+ +NFFH
Sbjct: 338 ICSLCNKEQDVQKNCSGCGACMGKYFCEKCNFFDDDISKNQYHCDGCGICRTGGMDNFFH 517
Query: 696 CSKCGCCYSIALKNSHACVEGAMHHDCPICF 788
C KCGCCYS LK+SH CVE AMH +CP+C+
Sbjct: 518 CEKCGCCYSNVLKDSHHCVERAMHQNCPVCY 610
Score = 153 bits (329), Expect = 1e-036
Identities = 77/148 (52%), Positives = 81/148 (54%)
Frame = -3 / -2
Query: 784 QIGQS*CIAPSTHA*LFFSAIE*QHPHFEQWKKFSXXXXXXXXXXLQ*YCCLETSSSKSL 605
Q GQ *CIA ST * F + *QHPHF QWKK S Q*Y E SSSK L
Sbjct: 606 QTGQF*CIALSTQ**ESFKTLL*QHPHFSQWKKLSMPPVLQMPHPSQ*YWFFEISSSKKL 427
Query: 604 HKPQKYFPMQTPQLIHTCRTSCSVPHNEHTTCCTSWRGSSCLFILSILMEFLVSLWQCRQ 425
H QKYFPM PQ TSCS+ E T SWRG SC S EFL LWQCRQ
Sbjct: 426 HFSQKYFPMHAPQPEQFFCTSCSLLQREQMTLLISWRGMSCRSRTSTSSEFLAWLWQCRQ 247
Query: 424 SKISLQQGALMRHLLL*CGHP*CIIPFS 341
K S QQGA + HLL+*C P C P S
Sbjct: 246 PKTSPQQGARILHLLV*CSQPCCSAPKS 163
Score = 109 bits (233), Expect = 2e-023
Identities = 57/146 (39%), Positives = 81/146 (55%)
Frame = -2 / -1
Query: 785 ADWTVMMHRPFNTCMTILQRN*IATSTF*TVEEILPPSDSTYSTSVAVILLFRDIIVEEF 606
AD V+MH T M +LQ +AT F VEEI+ + S + S+AVIL+ DIIV+E
Sbjct: 607 ADRAVLMHCSLYTMMRVLQNIAVATPAFFAVEEIVHATSSADAASIAVILVL*DIIVKEV 428
Query: 605 AQTTEVFPHANTAIDTYLSHLLFSATQ*AYNLLHFMAWKFMPLHFINFNGILSFIVAVSA 426
A TEVFPHA L H+LF + A +L F+A +P+ ++ ILS +VA+ A
Sbjct: 427 AFFTEVFPHACPTTGAVLLHILFFVAERADDLADFVAGDVVPVEDVHLERILSLVVAMPA 248
Query: 425 IKNFIAARSSYAASPSIMWTPIVHYP 348
++ AA Y A P +M ++ P
Sbjct: 247 AEDLAAAGRPYPAPPRVMLAAVLLCP 170
>gb|BG342914.2|BG342914 HVSMEg0001E07f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0001E07f, mRNA sequence
Length = 823
Score = 263 bits (569), Expect = 8e-070
Identities = 96/137 (70%), Positives = 113/137 (82%)
Frame = +3 / +2
Query: 294 NTDKINGSNPDDYEKFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDK 473
+T ++NGSN D+YE+FEKG+M YGC HYRR+CRI APCCN+IFDCRHCHNE+KNSI+ID
Sbjct: 104 DTARVNGSNSDEYERFEKGLMEYGCAHYRRKCRIPAPCCNDIFDCRHCHNESKNSIRIDT 283
Query: 474 MKRHELPRHEVQQVVCSLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHCNX 653
+RHEL RHE+QQV+CSLCGTEQEVRQ+CI+CGVCMGKYFC + KLFDDD SKQQ HC+
Sbjct: 284 PRRHELSRHELQQVICSLCGTEQEVRQICISCGVCMGKYFCEMSKLFDDDGSKQQDHCHG 463
Query: 654 XXXXXXXXXENFFHCSK 704
ENFFH K
Sbjct: 464 CGICKNGGRENFFHLVK 514
Score = 198 bits (427), Expect = 3e-050
Identities = 84/117 (71%), Positives = 90/117 (76%)
Frame = -3 / -2
Query: 646 Q*YCCLETSSSKSLHKPQKYFPMQTPQLIHTCRTSCSVPHNEHTTCCTSWRGSSCLFILS 467
Q* CC E SSSKSL QKYFPM TPQL+H CRTSCSVPHNEH TCC+SWR SSC +S
Sbjct: 456 Q*SCCFEPSSSKSLLISQKYFPMHTPQLMHICRTSCSVPHNEHMTCCSSWRESSCRLGVS 277
Query: 466 ILMEFLVSLWQCRQSKISLQQGALMRHLLL*CGHP*CIIPFSNFS*SSGFEPLILSV 296
IL+EF SLWQCRQSK+SLQQGA MRH L *C HP I PFSN S SS EPL L+V
Sbjct: 276 ILIEFFDSLWQCRQSKMSLQQGAGMRHFLR*CAHPYSINPFSNLSYSSELEPLTLAV 106
Score = 177 bits (380), Expect = 9e-044
Identities = 79/133 (59%), Positives = 89/133 (66%)
Frame = -1 / -3
Query: 696 SGRNSPSLRFYIFHIRCSDTAV*RHHRRRVCTNHRSISPCKHRN*YILVAPPVQCHTMSI 517
S RN P F IFH SD AV HH +R C+ HR+ SPC H +* I V P VQCHTMSI
Sbjct: 506 SERNFPCHHFCIFHNHGSDPAVLSHHHQRACSFHRNTSPCIHHS*CIFVVPLVQCHTMSI 327
Query: 516 QPAALHGVEVHASSFYQF*WNS*FHCGSVGNQKFHCSKELLCGISFYNVDTHSALSLSQI 337
PAA+HGV+VH + YQF* NS HCGS GNQK HCSK L+CGI F NV H+ L SQI
Sbjct: 326 *PAAVHGVKVHVA*EYQF*SNSLIHCGSAGNQKCHCSKVLVCGIFFGNVHIHTPLIPSQI 147
Query: 336 SHSHQGLNH*SCL 298
H+HQ NH* L
Sbjct: 146 FHTHQS*NH*PWL 108
Score = 164 bits (352), Expect = 7e-040
Identities = 82/138 (59%), Positives = 96/138 (69%)
Frame = -2 / -1
Query: 704 F*TVEEILPPSDSTYSTSVAVILLFRDIIVEEFAQTTEVFPHANTAIDTYLSHLLFSATQ 525
F V+EI P + YST++AVILLF II++E A TE+ PHA T D YLS+LLFSATQ
Sbjct: 514 FNQVKEIFPATIFAYSTTMAVILLF*AIIIKELAHFTEILPHAYTTADAYLSYLLFSATQ 335
Query: 524 *AYNLLHFMAWKFMPLHFINFNGILSFIVAVSAIKNFIAARSSYAASPSIMWTPIVHYPF 345
*AY+LL FMA KFM IN N IL FIVAV AIKN IAAR YAA S+M T I+H
Sbjct: 334 *AYDLLQFMA*KFMSPRSINSNRIL*FIVAVPAIKNVIAARCWYAAFSSVMCTSILH*SL 155
Query: 344 LKFLIVIRV*TIDLVCIV 291
LK I+IRV TID C++
Sbjct: 154 LKSFILIRVRTIDPGCVI 101
Score = 163 bits (351), Expect = 9e-040
Identities = 79/133 (59%), Positives = 94/133 (70%)
Frame = +1 / +3
Query: 298 QTRSMVQTLMTMRNLRKG*CTMGVHIIEGDAA*ELLAAMKFLIADTATMKLRIPLKLIK* 477
Q SMV TLM+M++LR+ * +M VHI E +AA + LAAM FLIA TATM RI L+LI
Sbjct: 108 QPGSMVLTLMSMKDLRRD*WSMDVHITEENAAYQHLAAMTFLIAGTATMNQRIRLELILL 287
Query: 478 RGMNFHAMKCSRLYAHCVALNRRCDKYVSIAVFAWGNTSVVCANSSTMMSLNSSITATDV 657
MNFHAM CSR YAHCVALN+R DKY S V+AWG+ SV A+S MM+ NS ITA V
Sbjct: 288 GDMNFHAMNCSRSYAHCVALNKRYDKYASAVVYAWGSISVK*ASSLMMMAQNSRITAMVV 467
Query: 658 EYVESEGGRISST 696
EY + G+IS T
Sbjct: 468 EYAKMVAGKISFT 506
Score = 142 bits (304), Expect = 3e-033
Identities = 77/134 (57%), Positives = 94/134 (70%)
Frame = +2 / +1
Query: 296 YRQDQWFKP**L*EI*ERDNALWVSTL*KEMPHKSSLLQ*NF*LPTLPQ*N*EFH*N**N 475
+ Q QWF **+*+I*E N +W+ TL K+MPH S+LLQ*+F*LP LPQ* EF *N* +
Sbjct: 106 HSQGQWF*L**V*KI*EGINGVWMCTLPKKMPHTSTLLQ*HF*LPALPQ*IKEFD*N*YS 285
Query: 476 EEA*TSTP*SAAGCMLIVWH*TGGATSMYQLRCLHGEILLWFVQTLRR*CL*TAVSLQRM 655
*T TP*+AAG MLIVWH*T G T+M+QL C+HGE+ L Q L * L TA SL +
Sbjct: 286 *AT*TFTP*TAAGHMLIVWH*TRGTTNMHQLWCMHGEVFL*NEQAL***WLKTAGSLPWL 465
Query: 656 WNM*NRREGEFLPL 697
WNM +G+FL L
Sbjct: 466 WNMQKWWQGKFLSL 507
>gb|BF619842.2|BF619842 HVSMEc0009G18f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0009G18f, mRNA sequence
Length = 590
Score = 241 bits (520), Expect = 4e-063
Identities = 81/142 (57%), Positives = 102/142 (71%)
Frame = +3 / +1
Query: 336 KFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDKMKRHELPRHEVQQV 515
+ + G +GC HY RRCRIRAPCC E+F CRHCHN+ KNS+++D + RH++PRHE+ +V
Sbjct: 163 QMDLGAEQHGCEHYTRRCRIRAPCCGEVFGCRHCHNQAKNSLEVDVLDRHDIPRHEISKV 342
Query: 516 VCSLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHCNXXXXXXXXXXENFFH 695
+CSLC EQ+V++ C CG CM KYFC C FDDD+SK QYHC+ +NFFH
Sbjct: 343 ICSLCNKEQDVQKNCSGCGACMXKYFCEKCNFFDDDISKNQYHCDGCGICRTGGMDNFFH 522
Query: 696 CSKCGCCYSIALKNSHACVEGA 761
C KCGCCYS LK+SH CVE A
Sbjct: 523 CEKCGCCYSNVLKDSHHCVERA 588
Score = 138 bits (295), Expect = 5e-032
Identities = 70/141 (49%), Positives = 75/141 (53%)
Frame = -3 / -1
Query: 763 IAPSTHA*LFFSAIE*QHPHFEQWKKFSXXXXXXXXXXLQ*YCCLETSSSKSLHKPQKYF 584
+A ST * F + *QHPHF QWKK S Q*Y E SSSK LH QKYF
Sbjct: 590 LALSTQ**ESFKTLL*QHPHFSQWKKLSMPPVLQMPHPSQ*YWFFEISSSKKLHFSQKYF 411
Query: 583 PMQTPQLIHTCRTSCSVPHNEHTTCCTSWRGSSCLFILSILMEFLVSLWQCRQSKISLQQ 404
M PQ TSCS+ E T SWRG SC S EFL LWQCRQ K S QQ
Sbjct: 410 XMHAPQPEQFFCTSCSLLQREQMTLLISWRGMSCRSRTSTSSEFLAWLWQCRQPKTSPQQ 231
Query: 403 GALMRHLLL*CGHP*CIIPFS 341
GA + HLL+*C P C P S
Sbjct: 230 GARILHLLV*CSQPCCSAPKS 168
>gb|BG369930.2|BG369930 HVSMEi0026J11f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0026J11f, mRNA sequence
Length = 682
Score = 239 bits (516), Expect = 2e-062
Identities = 78/131 (59%), Positives = 97/131 (74%)
Frame = +3 / +3
Query: 399 APCCNEIFDCRHCHNETKNSIKIDKMKRHELPRHEVQQVVCSLCGTEQEVRQVCINCGVC 578
APCC E+F CRHCHN+ KNS+ +D + RH++PRHE+ +V+CSLC EQ+V + C CG C
Sbjct: 3 APCCGEVFSCRHCHNQAKNSLDVDVLDRHDIPRHEISKVICSLCNKEQDVHKNCSGCGAC 182
Query: 579 MGKYFCGLCKLFDDDVSKQQYHCNXXXXXXXXXXENFFHCSKCGCCYSIALKNSHACVEG 758
MGKYFC C FDDD+SK QYHC+ +NFFHC KCGCCYS LK+SH CVE
Sbjct: 183 MGKYFCEKCNFFDDDISKNQYHCDGCGICRTGGMDNFFHCEKCGCCYSNVLKDSHHCVER 362
Query: 759 AMHHDCPICFE 791
AMHH+CP+C+E
Sbjct: 363 AMHHNCPVCYE 395
Score = 134 bits (288), Expect = 4e-031
Identities = 68/129 (52%), Positives = 70/129 (54%)
Frame = -3 / -1
Query: 784 QIGQS*CIAPSTHA*LFFSAIE*QHPHFEQWKKFSXXXXXXXXXXLQ*YCCLETSSSKSL 605
Q GQ *CIA ST * F + *QHPHF QWKK S Q*Y E SSSK L
Sbjct: 388 QTGQL*CIALSTQ**ESFKTLL*QHPHFSQWKKLSMPPVLQMPHPSQ*YWFFEISSSKKL 209
Query: 604 HKPQKYFPMQTPQLIHTCRTSCSVPHNEHTTCCTSWRGSSCLFILSILMEFLVSLWQCRQ 425
H QKYFPM PQ TSCS+ E T SWRG SC S EFL LWQCRQ
Sbjct: 208 HFSQKYFPMHAPQPEQFLCTSCSLLQREQMTLLISWRGMSCRSRTSTSSEFLAWLWQCRQ 29
Query: 424 SKISLQQGA 398
K S QQGA
Sbjct: 28 LKTSPQQGA 2
>gb|CA008339.1|CA008339 HU10K10r HU Hordeum vulgare subsp. vulgare cDNA clone HU10K10
5-PRIME, mRNA sequence
Length = 532
Score = 236 bits (509), Expect = 1e-061
Identities = 78/136 (57%), Positives = 99/136 (72%)
Frame = +3 / +1
Query: 336 KFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDKMKRHELPRHEVQQV 515
+ + G +GC HY RRCRIRAPCC E+F CRHCHN+ KNS+++D + RH++PRHE+ +V
Sbjct: 124 QMDLGAEQHGCEHYTRRCRIRAPCCGEVFGCRHCHNQAKNSLEVDVLDRHDIPRHEISKV 303
Query: 516 VCSLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHCNXXXXXXXXXXENFFH 695
+CSLC EQ+V++ C CG CMGKYFC C FDDD+SK QYHC+ +NFFH
Sbjct: 304 ICSLCNKEQDVQKNCSGCGACMGKYFCEKCNFFDDDISKNQYHCDGCGICRTGGMDNFFH 483
Query: 696 CSKCGCCYSIALKNSH 743
C KCGCCYS LK+SH
Sbjct: 484 CEKCGCCYSNVLKDSH 531
Score = 140 bits (300), Expect = 1e-032
Identities = 67/131 (51%), Positives = 71/131 (54%)
Frame = -3 / -3
Query: 733 FSAIE*QHPHFEQWKKFSXXXXXXXXXXLQ*YCCLETSSSKSLHKPQKYFPMQTPQLIHT 554
F + *QHPHF QWKK S Q*Y E SSSK LH QKYFPM PQ
Sbjct: 521 FKTLL*QHPHFSQWKKLSMPPVLQMPHPSQ*YWFFEISSSKKLHFSQKYFPMHAPQPEQF 342
Query: 553 CRTSCSVPHNEHTTCCTSWRGSSCLFILSILMEFLVSLWQCRQSKISLQQGALMRHLLL* 374
TSCS+ E T SWRG SC S EFL LWQCRQ K S QQGA + HLL+*
Sbjct: 341 FCTSCSLLQREQMTLLISWRGMSCRSRTSTSSEFLAWLWQCRQPKTSPQQGARILHLLV* 162
Query: 373 CGHP*CIIPFS 341
C P C P S
Sbjct: 161 CSQPCCSAPKS 129
>gb|CA008597.1|CA008597 HU11H12r HU Hordeum vulgare subsp. vulgare cDNA clone HU11H12
5-PRIME, mRNA sequence
Length = 614
Score = 176 bits (378), Expect(2) = 5e-061
Identities = 61/103 (59%), Positives = 72/103 (69%)
Frame = +3 / +3
Query: 483 HELPRHEVQQVVCSLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHCNXXXX 662
HEL RH VQ V+C +C TEQ V QVC NCGVCMG YFC CK FDDDV K+QYHC
Sbjct: 270 HELDRHAVQSVICLVCDTEQPVAQVCSNCGVCMGDYFCRACKFFDDDVDKEQYHCKDCGI 449
Query: 663 XXXXXXENFFHCSKCGCCYSIALKNSHACVEGAMHHDCPICFE 791
+NFFHC KCG CYS+ L++ H C+E AM ++CPIC+E
Sbjct: 450 CRVGGKDNFFHCHKCGSCYSVTLRDKHVCIEDAMKNNCPICYE 578
Score = 112 bits (240), Expect(2) = 3e-032
Identities = 53/101 (52%), Positives = 56/101 (55%)
Frame = -3 / -2
Query: 784 QIGQS*CIAPSTHA*LFFSAIE*QHPHFEQWKKFSXXXXXXXXXXLQ*YCCLETSSSKSL 605
QIGQ IA S H L E* PH QWKK S LQ YC L TSSSK+L
Sbjct: 571 QIGQLFFIASSMHTCLSLRVTE*HDPHLWQWKKLSLPPTLQMPQSLQWYCSLSTSSSKNL 392
Query: 604 HKPQKYFPMQTPQLIHTCRTSCSVPHNEHTTCCTSWRGSSC 482
H QK PM TPQL+HTC T CSV H T T+WR SSC
Sbjct: 391 HARQK*SPMHTPQLLHTCATGCSVSQTRHMTDWTAWRSSSC 269
Score = 79.0 bits (166), Expect(2) = 5e-061
Identities = 24/32 (75%), Positives = 29/32 (90%)
Frame = +3 / +3
Query: 354 MHYGCPHYRRRCRIRAPCCNEIFDCRHCHNET 449
M +GC HYRRRCRIRAPCCN++F CRHCHN++
Sbjct: 162 MGFGCKHYRRRCRIRAPCCNDVFHCRHCHNDS 257
Score = 45.5 bits (93), Expect(2) = 3e-032
Identities = 20/31 (64%), Positives = 22/31 (70%)
Frame = -3 / -2
Query: 454 FLVSLWQCRQSKISLQQGALMRHLLL*CGHP 362
F+ SLWQ RQ K SLQ GA + H LL*C HP
Sbjct: 262 FVESLWQWRQWKTSLQHGARILHRLL*CLHP 170
>gb|AL505025.1|AL505025 AL505025 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW07C11V 5', mRNA sequence
Length = 478
Score = 211 bits (456), Expect = 3e-054
Identities = 76/96 (79%), Positives = 82/96 (85%)
Frame = +3 / +3
Query: 504 VQQVVCSLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHCNXXXXXXXXXXE 683
+ QV+CSLCGTEQEVRQ+CI+CGVCMGKYFC +CKLFDDDVSKQQYHC+ E
Sbjct: 3 MXQVICSLCGTEQEVRQICISCGVCMGKYFCEVCKLFDDDVSKQQYHCHGCGICRIGGRE 182
Query: 684 NFFHCSKCGCCYSIALKNSHACVEGAMHHDCPICFE 791
NFFHCSKCGCCYS LKNSHACVEGAMHHDCPICFE
Sbjct: 183 NFFHCSKCGCCYSTVLKNSHACVEGAMHHDCPICFE 290
Score = 157 bits (337), Expect = 8e-038
Identities = 67/96 (69%), Positives = 79/96 (82%)
Frame = -2 / -3
Query: 791 LEADWTVMMHRPFNTCMTILQRN*IATSTF*TVEEILPPSDSTYSTSVAVILLFRDIIVE 612
LEADWTVMMH FNTCMT+LQ + I TSTF* V+EILP ++S YST++AVILLF DII++
Sbjct: 290 LEADWTVMMHGSFNTCMTVLQNSRITTSTF*AVKEILPATNSAYSTTMAVILLF*DIIIK 111
Query: 611 EFAQTTEVFPHANTAIDTYLSHLLFSATQ*AYNLLH 504
E A TE+ PHA T D YLS+LLFSATQ*AY+LLH
Sbjct: 110 ELAHFTEILPHAYTTADAYLSYLLFSATQ*AYDLLH 3
Score = 147 bits (316), Expect = 6e-035
Identities = 65/95 (68%), Positives = 71/95 (74%)
Frame = -1 / -2
Query: 792 TRSRLDSHDASPLQHMHDYSSAQLNSNIHILNSGRNSPSLRFYIFHIRCSDTAV*RHHRR 613
TRSRLDSHDA LQHMHD SS Q N+NIHIL+S RNSP +F IFH SDTAV RHH +
Sbjct: 291 TRSRLDSHDAWLLQHMHDCSSKQ*NNNIHILSSERNSPCHQFCIFHNHGSDTAVLRHHHQ 112
Query: 612 RVCTNHRSISPCKHRN*YILVAPPVQCHTMSIQPA 508
R CT HR+ SPC H +* I V P VQCHTMSI PA
Sbjct: 111 RACTLHRNTSPCIHHS*CIFVVPLVQCHTMSI*PA 7
Score = 144 bits (309), Expect = 6e-034
Identities = 67/95 (70%), Positives = 71/95 (74%)
Frame = +1 / +1
Query: 508 SRLYAHCVALNRRCDKYVSIAVFAWGNTSVVCANSSTMMSLNSSITATDVEYVESEGGRI 687
SR YAHCVALN+R DKY S V+AWG+ SV CA+S MMS NSSITA VEY E GRI
Sbjct: 7 SRSYAHCVALNKRYDKYASAVVYAWGSISVKCASSLMMMSQNSSITAMVVEYAELVAGRI 186
Query: 688 SSTVQNVDVAIQLR*RIVMHVLKGRCIMTVQSASS 792
S T QNVDV I L *R VMHVLK CIMTVQSASS
Sbjct: 187 SFTAQNVDVVILLF*RTVMHVLKEPCIMTVQSASS 291
Score = 140 bits (300), Expect = 1e-032
Identities = 65/94 (69%), Positives = 71/94 (75%)
Frame = +2 / +2
Query: 509 AGCMLIVWH*TGGATSMYQLRCLHGEILLWFVQTLRR*CL*TAVSLQRMWNM*NRREGEF 688
AG MLIVWH*T G T+M+QL C+HGE+ L VQ L *CL TAVSL +WNM N +GEF
Sbjct: 8 AGHMLIVWH*TRGTTNMHQLWCMHGEVFL*SVQAL***CLKTAVSLPWLWNMQNWWQGEF 187
Query: 689 LPLFKMWMLLFNCAEE*SCMC*RGDAS*LSNLLR 790
L L KMWMLLF C EE SCMC*R AS*LSNLLR
Sbjct: 188 LSLLKMWMLLFYCFEEQSCMC*RSHAS*LSNLLR 289
Score = 105 bits (223), Expect(2) = 3e-039
Identities = 39/46 (84%), Positives = 40/46 (86%)
Frame = -3 / -1
Query: 646 Q*YCCLETSSSKSLHKPQKYFPMQTPQLIHTCRTSCSVPHNEHTTC 509
Q*YCC ETSSSKSLH QKYFPM TPQL+H CRTSCSVPHNEH TC
Sbjct: 145 Q*YCCFETSSSKSLHTSQKYFPMHTPQLMHICRTSCSVPHNEHMTC 8
Score = 77.1 bits (162), Expect(2) = 3e-039
Identities = 32/37 (86%), Positives = 34/37 (91%)
Frame = -3 / -1
Query: 790 SKQIGQS*CIAPSTHA*LFFSAIE*QHPHFEQWKKFS 680
SKQIGQS*C+APSTHA*LFF +E*QHPHFEQ KKFS
Sbjct: 289 SKQIGQS*CMAPSTHA*LFFKTVE*QHPHFEQ*KKFS 179
>gb|CA006612.1|CA006612 HU05D02r HU Hordeum vulgare subsp. vulgare cDNA clone HU05D02
5-PRIME, mRNA sequence
Length = 521
Score = 204 bits (441), Expect = 4e-052
Identities = 67/121 (55%), Positives = 87/121 (71%)
Frame = +3 / +2
Query: 336 KFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDKMKRHELPRHEVQQV 515
+ + G +GC HY RRCRIRAPCC E+F CRHCHN+ KNS+++D + RH++PRHE+ +V
Sbjct: 158 QMDLGAEQHGCEHYTRRCRIRAPCCGEVFGCRHCHNQAKNSLEVDVLDRHDIPRHEISKV 337
Query: 516 VCSLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHCNXXXXXXXXXXENFFH 695
+CSLC EQ+V++ C CG CMGKYFC C FDDD+SK QYHC+ +NFFH
Sbjct: 338 ICSLCNKEQDVQKNCSGCGACMGKYFCEKCNFFDDDISKNQYHCDGCGICRTGGMDNFFH 517
Query: 696 C 698
C
Sbjct: 518 C 520
Score = 122 bits (260), Expect = 3e-027
Identities = 60/119 (50%), Positives = 63/119 (52%)
Frame = -3 / -3
Query: 697 QWKKFSXXXXXXXXXXLQ*YCCLETSSSKSLHKPQKYFPMQTPQLIHTCRTSCSVPHNEH 518
QWKK S Q*Y E SSSK LH QKYFPM PQ TSCS+ E
Sbjct: 519 QWKKLSMPPVLQMPHPSQ*YWFFEISSSKKLHFSQKYFPMHAPQPEQFFCTSCSLLQREQ 340
Query: 517 TTCCTSWRGSSCLFILSILMEFLVSLWQCRQSKISLQQGALMRHLLL*CGHP*CIIPFS 341
T SWRG SC S EFL LWQCRQ K S QQGA + HLL+*C P C P S
Sbjct: 339 MTLLISWRGMSCRSRTSTSSEFLAWLWQCRQPKTSPQQGARILHLLV*CSQPCCSAPKS 163
>gb|BJ464822.1|BJ464822 BJ464822 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags36c23 5', mRNA sequence
Length = 584
Score = 147 bits (316), Expect(2) = 5e-051
Identities = 51/95 (53%), Positives = 68/95 (71%)
Frame = +3 / +1
Query: 480 RHELPRHEVQQVVCSLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHCNXXX 659
RH + R +V++VVC LC TEQ V QVC+ CGV MG+YFC +CK +DDD K QYHC+
Sbjct: 295 RHNICRQDVEKVVCVLCDTEQPVSQVCVRCGVNMGEYFCDVCKFYDDDTEKGQYHCHDCG 474
Query: 660 XXXXXXXENFFHCSKCGCCYSIALKNSHACVEGAM 764
EN+FHC+KCG CY++AL+++H CVE +M
Sbjct: 475 ICRVGGKENYFHCAKCGSCYAVALRDNHQCVEDSM 579
Score = 94.5 bits (200), Expect(2) = 8e-028
Identities = 45/94 (47%), Positives = 49/94 (52%)
Frame = -3 / -1
Query: 763 IAPSTHA*LFFSAIE*QHPHFEQWKKFSXXXXXXXXXXLQ*YCCLETSSSKSLHKPQKYF 584
I STH L +A * PHF QWK FS Q YC SSS +LH QKY
Sbjct: 578 IESSTH*WLSRNATA*HDPHFAQWK*FSLPPTLHMPQSWQWYCPFSVSSS*NLHTSQKYS 399
Query: 583 PMQTPQLIHTCRTSCSVPHNEHTTCCTSWRGSSC 482
P+ TP L HTC T CSV + HTT TSWR C
Sbjct: 398 PILTPHLTHTCDTGCSVSQSTHTTFSTSWRHILC 297
Score = 73.9 bits (155), Expect(2) = 5e-051
Identities = 23/33 (69%), Positives = 27/33 (81%)
Frame = +3 / +1
Query: 348 GIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNE 446
G M +GC HYRRRC+I APCC E+F CRHCHN+
Sbjct: 178 GKMEHGCEHYRRRCKIVAPCCKEVFPCRHCHND 276
Score = 49.2 bits (101), Expect(2) = 8e-028
Identities = 21/37 (56%), Positives = 24/37 (64%)
Frame = -3 / -1
Query: 451 LVSLWQCRQSKISLQQGALMRHLLL*CGHP*CIIPFS 341
+ SLWQ RQ SLQQGA + HL *C HP I+P S
Sbjct: 281 VASLWQWRQGNTSLQQGATILHLRR*CSHPCSILPTS 171
>gb|BG342949.2|BG342949 HVSMEg0001H04f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0001H04f, mRNA sequence
Length = 844
Score = 193 bits (415), Expect(2) = 7e-051
Identities = 62/105 (59%), Positives = 81/105 (77%)
Frame = +3 / +3
Query: 336 KFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDKMKRHELPRHEVQQV 515
+ + G +GC HY RRCRIRAPCC E+F CRHCHN+ KNS+++D + RH++PRHE+ +V
Sbjct: 159 QMDLGAEQHGCEHYTRRCRIRAPCCGEVFGCRHCHNQAKNSLEVDVLDRHDIPRHEISKV 338
Query: 516 VCSLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHCN 650
+CSLC EQ+V++ C CG CMGKYFC C FDDD+SK QYHC+
Sbjct: 339 ICSLCNKEQDVQKNCSGCGACMGKYFCEKCNFFDDDISKNQYHCD 473
Score = 114 bits (244), Expect = 5e-025
Identities = 55/102 (53%), Positives = 58/102 (56%)
Frame = -3 / -1
Query: 646 Q*YCCLETSSSKSLHKPQKYFPMQTPQLIHTCRTSCSVPHNEHTTCCTSWRGSSCLFILS 467
Q*Y E SSSK LH QKYFPM PQ TSCS+ E T SWRG SC S
Sbjct: 469 Q*YWFFEISSSKKLHFSQKYFPMHAPQPEQFFCTSCSLLQREQMTLLISWRGMSCRSRTS 290
Query: 466 ILMEFLVSLWQCRQSKISLQQGALMRHLLL*CGHP*CIIPFS 341
EFL LWQCRQ K S QQGA + HLL+*C P C P S
Sbjct: 289 TSSEFLAWLWQCRQPKTSPQQGARILHLLV*CSQPCCSAPKS 164
Score = 30.4 bits (60), Expect(2) = 7e-051
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +3 / +2
Query: 681 ENFFHCSKCGCCYSIALK 734
E+FFHC G CYS L+
Sbjct: 608 EHFFHCKNAGGCYSNGLE 661
>gb|DW474945.1|DW474945 22-n221 Subtracted libraries from epidermis of 7 day old barley
plants inoculated with R. secalis or the avirulence
protein NIP1 Hordeum vulgare subsp. vulgare cDNA clone
22-n221 similar to Best hit to zinc finger protein
ZFP-like in rice (BAD87761), mRNA sequence
Length = 689
Score = 188 bits (406), Expect(2) = 4e-050
Identities = 66/84 (78%), Positives = 78/84 (92%)
Frame = +3 / +1
Query: 294 NTDKINGSNPDDYEKFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDK 473
+T ++NGSN D+YE+FEKG+M YGC HYRRRCRIRAPCCN+IFDCRHCHNE+KNSI+ID
Sbjct: 436 DTARVNGSNSDEYERFEKGLMEYGCAHYRRRCRIRAPCCNDIFDCRHCHNESKNSIRIDT 615
Query: 474 MKRHELPRHEVQQVVCSLCGTEQE 545
+RHELPRHE+QQV+CSLCGTEQE
Sbjct: 616 PRRHELPRHELQQVICSLCGTEQE 687
Score = 149 bits (319), Expect(2) = 3e-041
Identities = 62/84 (73%), Positives = 67/84 (79%)
Frame = -3 / -1
Query: 547 TSCSVPHNEHTTCCTSWRGSSCLFILSILMEFLVSLWQCRQSKISLQQGALMRHLLL*CG 368
TSCSVPHNEH TCC+SWRGSSC +SIL+EF SLWQCRQSK+SLQQGA MRHLL *C
Sbjct: 689 TSCSVPHNEHMTCCSSWRGSSCRLGVSILIEFFDSLWQCRQSKMSLQQGARMRHLLR*CA 510
Query: 367 HP*CIIPFSNFS*SSGFEPLILSV 296
HP I PFSN S SS EPL L+V
Sbjct: 509 HPYSINPFSNLSYSSELEPLTLAV 438
Score = 129 bits (277), Expect(3) = 3e-032
Identities = 56/83 (67%), Positives = 61/83 (73%)
Frame = -1 / -2
Query: 546 PPVQCHTMSIQPAALHGVEVHASSFYQF*WNS*FHCGSVGNQKFHCSKELLCGISFYNVD 367
PPVQCHTMSI PAA+HGVEVH + YQF* NS HCGS GNQK HCSK L+CGI F NV
Sbjct: 688 PPVQCHTMSI*PAAVHGVEVHVA*EYQF*SNSLIHCGSAGNQKCHCSKVLVCGIFFGNVH 509
Query: 366 THSALSLSQISHSHQGLNH*SCL 298
H+ L SQI H+HQ NH* L
Sbjct: 508 IHTPLIPSQIFHTHQS*NH*PWL 440
Score = 116 bits (249), Expect = 1e-025
Identities = 57/85 (67%), Positives = 63/85 (74%)
Frame = -2 / -3
Query: 545 LLFSATQ*AYNLLHFMAWKFMPLHFINFNGILSFIVAVSAIKNFIAARSSYAASPSIMWT 366
LLFSATQ*AY+LL FMAWKFM IN N IL FIVAV AIKN IAAR SYAAS S+M T
Sbjct: 687 LLFSATQ*AYDLLQFMAWKFMSPRSINSNRIL*FIVAVPAIKNVIAARCSYAASSSVMCT 508
Query: 365 PIVHYPFLKFLIVIRV*TIDLVCIV 291
I+H LK I+IRV TID C++
Sbjct: 507 SILH*SLLKSFILIRVRTIDPGCVI 433
Score = 116 bits (247), Expect(2) = 1e-027
Identities = 56/83 (67%), Positives = 62/83 (74%)
Frame = +1 / +2
Query: 298 QTRSMVQTLMTMRNLRKG*CTMGVHIIEGDAA*ELLAAMKFLIADTATMKLRIPLKLIK* 477
Q SMV TLM+M++LR+ * +M VHI E DAA E LAAM FLIA TATM RI L+LI
Sbjct: 440 QPGSMVLTLMSMKDLRRD*WSMDVHITEEDAAYEHLAAMTFLIAGTATMNQRIRLELILL 619
Query: 478 RGMNFHAMKCSRLYAHCVALNRR 546
MNFHAM CSR YAHCVALNRR
Sbjct: 620 GDMNFHAMNCSRSYAHCVALNRR 688
Score = 105 bits (225), Expect = 2e-022
Identities = 55/84 (65%), Positives = 65/84 (77%)
Frame = +2 / +3
Query: 296 YRQDQWFKP**L*EI*ERDNALWVSTL*KEMPHKSSLLQ*NF*LPTLPQ*N*EFH*N**N 475
+ Q QWF **+*+I*E N +W+ TL K+MPH S+LLQ*+F*LP LPQ* EF *N* +
Sbjct: 438 HSQGQWF*L**V*KI*EGINGVWMCTLPKKMPHTSTLLQ*HF*LPALPQ*IKEFD*N*YS 617
Query: 476 EEA*TSTP*SAAGCMLIVWH*TGG 547
*TSTP*+AAG MLIVWH*TGG
Sbjct: 618 *AT*TSTP*TAAGHMLIVWH*TGG 689
Score = 39.6 bits (80), Expect(2) = 3e-041
Identities = 20/50 (40%), Positives = 30/50 (60%)
Frame = -2 / -3
Query: 293 VVSIRQQRALGIFL*LGLSMLSRSKVKV*VQGAHLDLCSQYKLSRCKHNT 144
V+SI+Q+RAL + + LS+ S ++ + G H+ KLS CKHNT
Sbjct: 438 VISIKQRRALRK*IHI*LSVCMLSSNRLKLHGTHVGCLVVQKLSPCKHNT 289
Score = 29.5 bits (58), Expect(2) = 4e-050
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +1 / +2
Query: 145 VLCLQRDSLYWEQRSRWAPWTYTLTLLLLN 234
VLCLQ DS ++ W P + +L LL ++
Sbjct: 290 VLCLQGDSFCTTKQPTWVPCSLSLLLLSMH 379
Score = 26.7 bits (52), Expect(2) = 1e-027
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = +3 / +1
Query: 144 CVVFAT**LVLGTKVKMGALDLHLDFASAQHGQAKLKEYAKSSLLSDGN 290
CVV A *L+ MGA+ L A H + + + L DGN
Sbjct: 289 CVVLARR*LLHYQTADMGAVQLESVAAQHAHAKLNMDSLPQGPSLFDGN 435
Score = 24.4 bits (47), Expect(3) = 3e-032
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -3 / -1
Query: 253 FNLACPC*AEAKSRC 209
F+LAC C*A S C
Sbjct: 392 FSLACAC*AATDSSC 348
Score = 22.1 bits (42), Expect(3) = 3e-032
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -1 / -2
Query: 294 CSFHQTTK 271
C FHQTTK
Sbjct: 439 CHFHQTTK 416
>gb|AV909143.1|AV909143 AV909143 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak11m03 5', mRNA sequence
Length = 622
Score = 186 bits (401), Expect(2) = 2e-049
Identities = 65/83 (78%), Positives = 77/83 (92%)
Frame = +3 / +2
Query: 294 NTDKINGSNPDDYEKFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDK 473
+T ++NGSN D+YE+FEKG+M YGC HYRRRCRIRAPCCN+IFDCRHCHNE+KNSI+ID
Sbjct: 374 DTARVNGSNSDEYERFEKGLMEYGCAHYRRRCRIRAPCCNDIFDCRHCHNESKNSIRIDT 553
Query: 474 MKRHELPRHEVQQVVCSLCGTEQ 542
+RHELPRHE+QQV+CSLCGTEQ
Sbjct: 554 PRRHELPRHELQQVICSLCGTEQ 622
Score = 144 bits (310), Expect(2) = 6e-040
Identities = 60/82 (73%), Positives = 65/82 (79%)
Frame = -3 / -2
Query: 541 CSVPHNEHTTCCTSWRGSSCLFILSILMEFLVSLWQCRQSKISLQQGALMRHLLL*CGHP 362
CSVPHNEH TCC+SWRGSSC +SIL+EF SLWQCRQSK+SLQQGA MRHLL *C HP
Sbjct: 621 CSVPHNEHMTCCSSWRGSSCRLGVSILIEFFDSLWQCRQSKMSLQQGARMRHLLR*CAHP 442
Query: 361 *CIIPFSNFS*SSGFEPLILSV 296
I PFSN S SS EPL L+V
Sbjct: 441 YSINPFSNLSYSSELEPLTLAV 376
Score = 123 bits (263), Expect(3) = 2e-030
Identities = 54/81 (66%), Positives = 59/81 (72%)
Frame = -1 / -3
Query: 540 VQCHTMSIQPAALHGVEVHASSFYQF*WNS*FHCGSVGNQKFHCSKELLCGISFYNVDTH 361
VQCHTMSI PAA+HGVEVH + YQF* NS HCGS GNQK HCSK L+CGI F NV H
Sbjct: 620 VQCHTMSI*PAAVHGVEVHVA*EYQF*SNSLIHCGSAGNQKCHCSKVLVCGIFFGNVHIH 441
Query: 360 SALSLSQISHSHQGLNH*SCL 298
+ L SQI H+HQ NH* L
Sbjct: 440 TPLIPSQIFHTHQS*NH*PWL 378
Score = 115 bits (245), Expect = 4e-025
Identities = 56/84 (66%), Positives = 62/84 (73%)
Frame = -2 / -1
Query: 542 LFSATQ*AYNLLHFMAWKFMPLHFINFNGILSFIVAVSAIKNFIAARSSYAASPSIMWTP 363
LFSATQ*AY+LL FMAWKFM IN N IL FIVAV AIKN IAAR SYAAS S+M T
Sbjct: 622 LFSATQ*AYDLLQFMAWKFMSPRSINSNRIL*FIVAVPAIKNVIAARCSYAASSSVMCTS 443
Query: 362 IVHYPFLKFLIVIRV*TIDLVCIV 291
I+H LK I+IRV TID C++
Sbjct: 442 ILH*SLLKSFILIRVRTIDPGCVI 371
Score = 111 bits (237), Expect(2) = 3e-026
Identities = 54/81 (66%), Positives = 60/81 (74%)
Frame = +1 / +3
Query: 298 QTRSMVQTLMTMRNLRKG*CTMGVHIIEGDAA*ELLAAMKFLIADTATMKLRIPLKLIK* 477
Q SMV TLM+M++LR+ * +M VHI E DAA E LAAM FLIA TATM RI L+LI
Sbjct: 378 QPGSMVLTLMSMKDLRRD*WSMDVHITEEDAAYEHLAAMTFLIAGTATMNQRIRLELILL 557
Query: 478 RGMNFHAMKCSRLYAHCVALN 540
MNFHAM CSR YAHCVALN
Sbjct: 558 GDMNFHAMNCSRSYAHCVALN 620
Score = 100 bits (213), Expect = 1e-020
Identities = 53/82 (64%), Positives = 63/82 (76%)
Frame = +2 / +1
Query: 296 YRQDQWFKP**L*EI*ERDNALWVSTL*KEMPHKSSLLQ*NF*LPTLPQ*N*EFH*N**N 475
+ Q QWF **+*+I*E N +W+ TL K+MPH S+LLQ*+F*LP LPQ* EF *N* +
Sbjct: 376 HSQGQWF*L**V*KI*EGINGVWMCTLPKKMPHTSTLLQ*HF*LPALPQ*IKEFD*N*YS 555
Query: 476 EEA*TSTP*SAAGCMLIVWH*T 541
*TSTP*+AAG MLIVWH*T
Sbjct: 556 *AT*TSTP*TAAGHMLIVWH*T 621
Score = 39.6 bits (80), Expect(2) = 6e-040
Identities = 20/50 (40%), Positives = 30/50 (60%)
Frame = -2 / -1
Query: 293 VVSIRQQRALGIFL*LGLSMLSRSKVKV*VQGAHLDLCSQYKLSRCKHNT 144
V+SI+Q+RAL + + LS+ S ++ + G H+ KLS CKHNT
Sbjct: 376 VISIKQRRALRK*IHI*LSVCMLSSNRLKLHGTHVGCLVVQKLSPCKHNT 227
Score = 29.5 bits (58), Expect(2) = 2e-049
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +1 / +3
Query: 145 VLCLQRDSLYWEQRSRWAPWTYTLTLLLLN 234
VLCLQ DS ++ W P + +L LL ++
Sbjct: 228 VLCLQGDSFCTTKQPTWVPCSLSLLLLSMH 317
Score = 26.7 bits (52), Expect(2) = 3e-026
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = +3 / +2
Query: 144 CVVFAT**LVLGTKVKMGALDLHLDFASAQHGQAKLKEYAKSSLLSDGN 290
CVV A *L+ MGA+ L A H + + + L DGN
Sbjct: 227 CVVLARR*LLHYQTADMGAVQLESVAAQHAHAKLNMDSLPQGPSLFDGN 373
Score = 24.4 bits (47), Expect(3) = 2e-030
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -3 / -2
Query: 253 FNLACPC*AEAKSRC 209
F+LAC C*A S C
Sbjct: 330 FSLACAC*AATDSSC 286
Score = 22.1 bits (42), Expect(3) = 2e-030
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -1 / -3
Query: 294 CSFHQTTK 271
C FHQTTK
Sbjct: 377 CHFHQTTK 354
>gb|AV923846.1|AV923846 AV923846 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd1m15 5', mRNA sequence
Length = 519
Score = 193 bits (415), Expect = 1e-048
Identities = 62/105 (59%), Positives = 81/105 (77%)
Frame = +3 / +1
Query: 336 KFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDKMKRHELPRHEVQQV 515
+ + G +GC HY RRCRIRAPCC E+F CRHCHN+ KNS+++D + RH++PRHE+ +V
Sbjct: 178 QMDLGAEQHGCEHYTRRCRIRAPCCGEVFGCRHCHNQAKNSLEVDVLDRHDIPRHEISKV 357
Query: 516 VCSLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHCN 650
+CSLC EQ+V++ C CG CMGKYFC C FDDD+SK QYHC+
Sbjct: 358 ICSLCNKEQDVQKNCSGCGACMGKYFCEKCNFFDDDISKNQYHCD 492
Score = 114 bits (244), Expect = 5e-025
Identities = 55/102 (53%), Positives = 58/102 (56%)
Frame = -3 / -2
Query: 646 Q*YCCLETSSSKSLHKPQKYFPMQTPQLIHTCRTSCSVPHNEHTTCCTSWRGSSCLFILS 467
Q*Y E SSSK LH QKYFPM PQ TSCS+ E T SWRG SC S
Sbjct: 488 Q*YWFFEISSSKKLHFSQKYFPMHAPQPEQFFCTSCSLLQREQMTLLISWRGMSCRSRTS 309
Query: 466 ILMEFLVSLWQCRQSKISLQQGALMRHLLL*CGHP*CIIPFS 341
EFL LWQCRQ K S QQGA + HLL+*C P C P S
Sbjct: 308 TSSEFLAWLWQCRQPKTSPQQGARILHLLV*CSQPCCSAPKS 183
>gb|AV923246.1|AV923246 AV923246 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd12g02 5', mRNA sequence
Length = 683
Score = 144 bits (308), Expect(3) = 6e-045
Identities = 50/59 (84%), Positives = 56/59 (94%)
Frame = +3 / +3
Query: 363 GCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDKMKRHELPRHEVQQVVCSLCGTE 539
GC HYRRRCRIRAPCCN+IFDCRHCHNE+KNSI+ID +RHELPRHE+QQV+CSLCGTE
Sbjct: 507 GCAHYRRRCRIRAPCCNDIFDCRHCHNESKNSIRIDTPRRHELPRHELQQVICSLCGTE 683
Score = 118 bits (252), Expect(3) = 1e-035
Identities = 46/59 (77%), Positives = 50/59 (84%)
Frame = -3 / -2
Query: 538 SVPHNEHTTCCTSWRGSSCLFILSILMEFLVSLWQCRQSKISLQQGALMRHLLL*CGHP 362
SVPHNEH TCC+SWRGSSC +SIL+EF SLWQCRQSK+SLQQGA MRHLL *C HP
Sbjct: 682 SVPHNEHMTCCSSWRGSSCRLGVSILIEFFDSLWQCRQSKMSLQQGARMRHLLR*CAHP 506
Score = 98.7 bits (209), Expect(4) = 2e-026
Identities = 41/56 (73%), Positives = 44/56 (78%)
Frame = -1 / -3
Query: 537 QCHTMSIQPAALHGVEVHASSFYQF*WNS*FHCGSVGNQKFHCSKELLCGISFYNV 370
QCHTMSI PAA+HGVEVH + YQF* NS HCGS GNQK HCSK L+CGI F NV
Sbjct: 681 QCHTMSI*PAAVHGVEVHVA*EYQF*SNSLIHCGSAGNQKCHCSKVLVCGIFFGNV 514
Score = 85.8 bits (181), Expect(3) = 5e-022
Identities = 41/57 (71%), Positives = 42/57 (73%)
Frame = +1 / +1
Query: 367 VHIIEGDAA*ELLAAMKFLIADTATMKLRIPLKLIK*RGMNFHAMKCSRLYAHCVAL 537
VHI E DAA E LAAM FLIA TATM RI L+LI MNFHAM CSR YAHCVAL
Sbjct: 511 VHITEEDAAYEHLAAMTFLIAGTATMNQRIRLELILLGDMNFHAMNCSRSYAHCVAL 681
Score = 46.0 bits (94), Expect(3) = 6e-045
Identities = 15/24 (62%), Positives = 21/24 (87%)
Frame = +3 / +2
Query: 294 NTDKINGSNPDDYEKFEKGIMHYG 365
+T ++NGSN D+YE+FEKG+M YG
Sbjct: 437 DTARVNGSNSDEYERFEKGLMEYG 508
Score = 39.6 bits (80), Expect(3) = 1e-035
Identities = 20/50 (40%), Positives = 30/50 (60%)
Frame = -2 / -2
Query: 293 VVSIRQQRALGIFL*LGLSMLSRSKVKV*VQGAHLDLCSQYKLSRCKHNT 144
V+SI+Q+RAL + + LS+ S ++ + G H+ KLS CKHNT
Sbjct: 439 VISIKQRRALRK*IHI*LSVCMLSSNRLKLHGTHVGCLVVQKLSPCKHNT 290
Score = 30.4 bits (60), Expect(3) = 1e-035
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = -2 / -2
Query: 365 PIVHYPFLKFLIVIRV*TIDLVCIV 291
PI+H LK I+IRV TID C++
Sbjct: 508 PILH*SLLKSFILIRVRTIDPGCVI 434
Score = 29.5 bits (58), Expect(3) = 6e-045
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +1 / +3
Query: 145 VLCLQRDSLYWEQRSRWAPWTYTLTLLLLN 234
VLCLQ DS ++ W P + +L LL ++
Sbjct: 291 VLCLQGDSFCTTKQPTWVPCSLSLLLLSMH 380
Score = 29.0 bits (57), Expect(3) = 5e-022
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = +1 / +3
Query: 298 QTRSMVQTLMTMRNLRKG*CTMG 366
Q SMV TLM+M++LR+ * +MG
Sbjct: 441 QPGSMVLTLMSMKDLRRD*WSMG 509
Score = 28.6 bits (56), Expect(4) = 2e-026
Identities = 14/23 (60%), Positives = 15/23 (65%)
Frame = -3 / -3
Query: 364 P*CIIPFSNFS*SSGFEPLILSV 296
P I PFSN S SS EPL L+V
Sbjct: 507 PYSINPFSNLSYSSELEPLTLAV 439
Score = 26.7 bits (52), Expect(3) = 5e-022
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = +3 / +2
Query: 144 CVVFAT**LVLGTKVKMGALDLHLDFASAQHGQAKLKEYAKSSLLSDGN 290
CVV A *L+ MGA+ L A H + + + L DGN
Sbjct: 290 CVVLARR*LLHYQTADMGAVQLESVAAQHAHAKLNMDSLPQGPSLFDGN 436
Score = 24.4 bits (47), Expect(4) = 2e-026
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -3 / -3
Query: 253 FNLACPC*AEAKSRC 209
F+LAC C*A S C
Sbjct: 393 FSLACAC*AATDSSC 349
Score = 22.1 bits (42), Expect(4) = 2e-026
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -1 / -1
Query: 294 CSFHQTTK 271
C FHQTTK
Sbjct: 440 CHFHQTTK 417
>gb|CA012048.1|CA012048 HT04E17r HT Hordeum vulgare subsp. vulgare cDNA clone HT04E17
5-PRIME, mRNA sequence
Length = 554
Score = 169 bits (363), Expect(2) = 3e-044
Identities = 58/76 (76%), Positives = 70/76 (92%)
Frame = +3 / +1
Query: 294 NTDKINGSNPDDYEKFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDK 473
+T ++NGSN D+YE+FEKG+M YGC HYRRRCRIRAPCCN+IFDCRHCHNE+KNSI+ID
Sbjct: 325 DTARVNGSNSDEYERFEKGLMEYGCAHYRRRCRIRAPCCNDIFDCRHCHNESKNSIRIDT 504
Query: 474 MKRHELPRHEVQQVVC 521
+RHELPRHE+QQV+C
Sbjct: 505 PRRHELPRHELQQVIC 552
Score = 127 bits (272), Expect(2) = 9e-035
Identities = 54/76 (71%), Positives = 59/76 (77%)
Frame = -3 / -1
Query: 523 EHTTCCTSWRGSSCLFILSILMEFLVSLWQCRQSKISLQQGALMRHLLL*CGHP*CIIPF 344
EH TCC+SWRGSSC +SIL+EF SLWQCRQSK+SLQQGA MRHLL *C HP I PF
Sbjct: 554 EHMTCCSSWRGSSCRLGVSILIEFFDSLWQCRQSKMSLQQGARMRHLLR*CAHPYSINPF 375
Query: 343 SNFS*SSGFEPLILSV 296
SN S SS EPL L+V
Sbjct: 374 SNLSYSSELEPLTLAV 327
Score = 106 bits (227), Expect(3) = 2e-025
Identities = 48/75 (64%), Positives = 53/75 (70%)
Frame = -1 / -2
Query: 522 SIQPAALHGVEVHASSFYQF*WNS*FHCGSVGNQKFHCSKELLCGISFYNVDTHSALSLS 343
SI PAA+HGVEVH + YQF* NS HCGS GNQK HCSK L+CGI F NV H+ L S
Sbjct: 553 SI*PAAVHGVEVHVA*EYQF*SNSLIHCGSAGNQKCHCSKVLVCGIFFGNVHIHTPLIPS 374
Query: 342 QISHSHQGLNH*SCL 298
QI H+HQ NH* L
Sbjct: 373 QIFHTHQS*NH*PWL 329
Score = 101 bits (216), Expect = 4e-021
Identities = 49/77 (63%), Positives = 55/77 (71%)
Frame = -2 / -3
Query: 521 AYNLLHFMAWKFMPLHFINFNGILSFIVAVSAIKNFIAARSSYAASPSIMWTPIVHYPFL 342
AY+LL FMAWKFM IN N IL FIVAV AIKN IAAR SYAAS S+M T I+H L
Sbjct: 552 AYDLLQFMAWKFMSPRSINSNRIL*FIVAVPAIKNVIAARCSYAASSSVMCTSILH*SLL 373
Query: 341 KFLIVIRV*TIDLVCIV 291
K I+IRV TID C++
Sbjct: 372 KSFILIRVRTIDPGCVI 322
Score = 95.5 bits (202), Expect(2) = 2e-021
Identities = 48/75 (64%), Positives = 54/75 (72%)
Frame = +1 / +2
Query: 298 QTRSMVQTLMTMRNLRKG*CTMGVHIIEGDAA*ELLAAMKFLIADTATMKLRIPLKLIK* 477
Q SMV TLM+M++LR+ * +M VHI E DAA E LAAM FLIA TATM RI L+LI
Sbjct: 329 QPGSMVLTLMSMKDLRRD*WSMDVHITEEDAAYEHLAAMTFLIAGTATMNQRIRLELILL 508
Query: 478 RGMNFHAMKCSRLYA 522
MNFHAM CSR YA
Sbjct: 509 GDMNFHAMNCSRSYA 553
Score = 39.6 bits (80), Expect(2) = 9e-035
Identities = 20/50 (40%), Positives = 30/50 (60%)
Frame = -2 / -3
Query: 293 VVSIRQQRALGIFL*LGLSMLSRSKVKV*VQGAHLDLCSQYKLSRCKHNT 144
V+SI+Q+RAL + + LS+ S ++ + G H+ KLS CKHNT
Sbjct: 327 VISIKQRRALRK*IHI*LSVCMLSSNRLKLHGTHVGCLVVQKLSPCKHNT 178
Score = 29.5 bits (58), Expect(2) = 3e-044
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +1 / +2
Query: 145 VLCLQRDSLYWEQRSRWAPWTYTLTLLLLN 234
VLCLQ DS ++ W P + +L LL ++
Sbjct: 179 VLCLQGDSFCTTKQPTWVPCSLSLLLLSMH 268
Score = 26.7 bits (52), Expect(2) = 2e-021
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = +3 / +1
Query: 144 CVVFAT**LVLGTKVKMGALDLHLDFASAQHGQAKLKEYAKSSLLSDGN 290
CVV A *L+ MGA+ L A H + + + L DGN
Sbjct: 178 CVVLARR*LLHYQTADMGAVQLESVAAQHAHAKLNMDSLPQGPSLFDGN 324
Score = 24.4 bits (47), Expect(3) = 2e-025
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -3 / -1
Query: 253 FNLACPC*AEAKSRC 209
F+LAC C*A S C
Sbjct: 281 FSLACAC*AATDSSC 237
Score = 22.1 bits (42), Expect(3) = 2e-025
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -1 / -2
Query: 294 CSFHQTTK 271
C FHQTTK
Sbjct: 328 CHFHQTTK 305
>gb|BF616887.1|BF616887 HVSMEc0013G20f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0013G20f, mRNA sequence
Length = 584
Score = 121 bits (259), Expect(2) = 3e-044
Identities = 44/72 (61%), Positives = 48/72 (66%)
Frame = +3 / +1
Query: 483 HELPRHEVQQVVCSLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHCNXXXX 662
HEL RH VQ V+C +C TEQ V QVC NCGVCMG YFC CK FDDDV K+QYHC
Sbjct: 364 HELDRHAVQSVICLVCDTEQPVAQVCSNCGVCMGDYFCRACKFFDDDVDKEQYHCKDCGI 543
Query: 663 XXXXXXENFFHC 698
+NFFHC
Sbjct: 544 CRVGGKDNFFHC 579
Score = 93.2 bits (197), Expect(2) = 6e-026
Identities = 40/72 (55%), Positives = 43/72 (59%)
Frame = -3 / -1
Query: 697 QWKKFSXXXXXXXXXXLQ*YCCLETSSSKSLHKPQKYFPMQTPQLIHTCRTSCSVPHNEH 518
QWKK S LQ YC L TSSSK+LH QK PM TPQL+HTC T CSV H
Sbjct: 578 QWKKLSLPPTLQMPQSLQWYCSLSTSSSKNLHARQK*SPMHTPQLLHTCATGCSVSQTRH 399
Query: 517 TTCCTSWRGSSC 482
T T+WR SSC
Sbjct: 398 MTDWTAWRSSSC 363
Score = 79.0 bits (166), Expect(2) = 3e-044
Identities = 24/32 (75%), Positives = 29/32 (90%)
Frame = +3 / +1
Query: 354 MHYGCPHYRRRCRIRAPCCNEIFDCRHCHNET 449
M +GC HYRRRCRIRAPCCN++F CRHCHN++
Sbjct: 139 MGFGCKHYRRRCRIRAPCCNDVFHCRHCHNDS 234
Score = 44.1 bits (90), Expect(2) = 6e-026
Identities = 20/32 (62%), Positives = 22/32 (68%)
Frame = -3 / -1
Query: 457 EFLVSLWQCRQSKISLQQGALMRHLLL*CGHP 362
E + SLWQ RQ K SLQ GA + H LL*C HP
Sbjct: 242 ETVESLWQWRQWKTSLQHGARILHRLL*CLHP 147
>gb|BI959212.1|BI959212 HVSMEn0018K16f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0018K16f, mRNA sequence
Length = 679
Score = 109 bits (233), Expect(3) = 1e-043
Identities = 40/75 (53%), Positives = 51/75 (68%)
Frame = +3 / +2
Query: 480 RHELPRHEVQQVVCSLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHCNXXX 659
RH + R +V++VVC LC TEQ V QVC+ CGV MG+YFC +CK +DDD K QYHC+
Sbjct: 395 RHNICRQDVEKVVCVLCDTEQPVSQVCVRCGVNMGEYFCDVCKFYDDDTEKGQYHCHDCG 574
Query: 660 XXXXXXXENFFHCSK 704
EN+ HC+K
Sbjct: 575 ICRVGXKENYXHCAK 619
Score = 83.1 bits (175), Expect(2) = 2e-024
Identities = 37/75 (49%), Positives = 40/75 (53%)
Frame = -3 / -2
Query: 706 HFEQWKKFSXXXXXXXXXXLQ*YCCLETSSSKSLHKPQKYFPMQTPQLIHTCRTSCSVPH 527
HF QW FS Q YC SSS +LH QKY P+ TP L HTC T CSV
Sbjct: 621 HFAQWX*FSLXPTLHMPQSWQWYCPFSVSSS*NLHTSQKYSPILTPHLTHTCDTGCSVSQ 442
Query: 526 NEHTTCCTSWRGSSC 482
+ HTT TSWR C
Sbjct: 441 STHTTFSTSWRHILC 397
Score = 73.9 bits (155), Expect(3) = 1e-043
Identities = 23/33 (69%), Positives = 27/33 (81%)
Frame = +3 / +2
Query: 348 GIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNE 446
G M +GC HYRRRC+I APCC E+F CRHCHN+
Sbjct: 278 GKMEHGCEHYRRRCKIVAPCCKEVFPCRHCHND 376
Score = 49.2 bits (101), Expect(2) = 2e-024
Identities = 21/37 (56%), Positives = 24/37 (64%)
Frame = -3 / -2
Query: 451 LVSLWQCRQSKISLQQGALMRHLLL*CGHP*CIIPFS 341
+ SLWQ RQ SLQQGA + HL *C HP I+P S
Sbjct: 381 VASLWQWRQGNTSLQQGATILHLRR*CSHPCSILPTS 271
Score = 31.3 bits (62), Expect(3) = 1e-043
Identities = 9/16 (56%), Positives = 14/16 (87%)
Frame = +3 / +3
Query: 708 GCCYSIALKNSHACVE 755
G CY++AL+++H CVE
Sbjct: 624 GSCYAVALRDNHQCVE 671
>gb|BE216717.2|BE216717 HV_CEb0011F08f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0011F08f, mRNA sequence
Length = 945
Score = 122 bits (261), Expect(2) = 2e-043
Identities = 43/87 (49%), Positives = 58/87 (66%)
Frame = +3 / +1
Query: 480 RHELPRHEVQQVVCSLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHCNXXX 659
RH + R +V++VVC LC TEQ V QVC+ CGV MG+YFC +CK +DDD K QYHC+
Sbjct: 256 RHNICRQDVEKVVCVLCDTEQPVSQVCVRCGVNMGEYFCDVCKFYDDDTEKGQYHCHDCG 435
Query: 660 XXXXXXXENFFHCSKCGCCYSIALKNS 740
E + HC+ CG CY+ AL+++
Sbjct: 436 ICRVGGKEKYLHCAXCGSCYAGALRDT 516
Score = 80.8 bits (170), Expect(2) = 9e-024
Identities = 38/83 (45%), Positives = 42/83 (50%)
Frame = -3 / -2
Query: 730 SAIE*QHPHFEQWKKFSXXXXXXXXXXLQ*YCCLETSSSKSLHKPQKYFPMQTPQLIHTC 551
+A * PH Q K FS Q YC SSS +LH QKY P+ TP L HTC
Sbjct: 506 NAPA*HDPHXAQCKYFSLPPTLHMPQSWQWYCPFSVSSS*NLHTSQKYSPILTPHLTHTC 327
Query: 550 RTSCSVPHNEHTTCCTSWRGSSC 482
T CSV + HTT TSWR C
Sbjct: 326 DTGCSVSQSTHTTFSTSWRHILC 258
Score = 73.9 bits (155), Expect(2) = 2e-043
Identities = 23/33 (69%), Positives = 27/33 (81%)
Frame = +3 / +1
Query: 348 GIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNE 446
G M +GC HYRRRC+I APCC E+F CRHCHN+
Sbjct: 139 GKMEHGCEHYRRRCKIVAPCCKEVFPCRHCHND 237
Score = 49.2 bits (101), Expect(2) = 9e-024
Identities = 21/37 (56%), Positives = 24/37 (64%)
Frame = -3 / -2
Query: 451 LVSLWQCRQSKISLQQGALMRHLLL*CGHP*CIIPFS 341
+ SLWQ RQ SLQQGA + HL *C HP I+P S
Sbjct: 242 VASLWQWRQGNTSLQQGATILHLRR*CSHPCSILPTS 132
>gb|CB882449.1|CB882449 HL01O07w HL Hordeum vulgare subsp. vulgare cDNA clone HL01O07
3-PRIME, mRNA sequence
Length = 593
Score = 138 bits (296), Expect = 4e-032
Identities = 50/63 (79%), Positives = 51/63 (80%)
Frame = +3 / +1
Query: 603 CKLFDDDVSKQQYHCNXXXXXXXXXXENFFHCSKCGCCYSIALKNSHACVEGAMHHDCPI 782
CKLFDDDVSKQQYHC+ ENFFHCSKCGCCYS LKNSHACVEGAMHHDCPI
Sbjct: 7 CKLFDDDVSKQQYHCHGCGICRIGGRENFFHCSKCGCCYSTVLKNSHACVEGAMHHDCPI 186
Query: 783 CFE 791
CFE
Sbjct: 187 CFE 195
Score = 104 bits (221), Expect = 8e-022
Identities = 44/63 (69%), Positives = 53/63 (84%)
Frame = -2 / -3
Query: 791 LEADWTVMMHRPFNTCMTILQRN*IATSTF*TVEEILPPSDSTYSTSVAVILLFRDIIVE 612
LEADWTVMMH FNTCMT+LQ + I TSTF* V+EILP ++S YST++AVILLF DII++
Sbjct: 195 LEADWTVMMHGSFNTCMTVLQNSRITTSTF*AVKEILPATNSAYSTTMAVILLF*DIIIK 16
Query: 611 EFA 603
E A
Sbjct: 15 ELA 7
Score = 102 bits (218), Expect = 2e-021
Identities = 45/64 (70%), Positives = 49/64 (76%)
Frame = -1 / -2
Query: 792 TRSRLDSHDASPLQHMHDYSSAQLNSNIHILNSGRNSPSLRFYIFHIRCSDTAV*RHHRR 613
TRSRLDSHDA LQHMHD SS Q N+NIHIL+S RNSP +F IFH SDTAV RHH +
Sbjct: 196 TRSRLDSHDAWLLQHMHDCSSKQ*NNNIHILSSERNSPCHQFCIFHNHGSDTAVLRHHHQ 17
Query: 612 RVCT 601
R CT
Sbjct: 16 RACT 5
>gb|CA004832.1|CA004832 HS18N03r HS Hordeum vulgare subsp. vulgare cDNA clone HS18N03
5-PRIME, mRNA sequence
Length = 397
Score = 133 bits (284), Expect = 2e-030
Identities = 42/75 (56%), Positives = 59/75 (78%)
Frame = +3 / +1
Query: 336 KFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDKMKRHELPRHEVQQV 515
+ + G +GC HY RRCRIRAPCC E+F CRHCHN+ KNS+++D + RH++PRHE+ +V
Sbjct: 172 QMDLGAEQHGCEHYTRRCRIRAPCCGEVFGCRHCHNQAKNSLEVDVLDRHDIPRHEISKV 351
Query: 516 VCSLCGTEQEVRQVC 560
+CSLC EQ+V++ C
Sbjct: 352 ICSLCNKEQDVQKNC 396
>gb|BG309299.2|BG309299 HVSMEc0007D18f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0007D18f, mRNA sequence
Length = 906
Score = 126 bits (269), Expect(2) = 1e-029
Identities = 41/73 (56%), Positives = 55/73 (75%)
Frame = +3 / +1
Query: 336 KFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDKMKRHELPRHEVQQV 515
+ + G GC HY RRCRIRAPCC E+F CRHCHN+ KNS+++D + RH++PRHE+ +V
Sbjct: 130 QMDLGAEQRGCEHYTRRCRIRAPCCGEVFGCRHCHNQAKNSLEVDVLDRHDIPRHEISRV 309
Query: 516 VCSLCGTEQEVRQ 554
+CSLC +QE Q
Sbjct: 310 ICSLCNKQQEWAQ 348
Score = 24.0 bits (46), Expect(2) = 1e-029
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +3 / +2
Query: 582 GKYFCGLCKLFDDD 623
GKYFCG F DD
Sbjct: 380 GKYFCGKKATFLDD 421
>gb|BF625611.2|BF625611 HVSMEa0011O14f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0011O14f, mRNA sequence
Length = 638
Score = 122 bits (260), Expect = 3e-027
Identities = 41/69 (59%), Positives = 48/69 (69%)
Frame = +3 / +2
Query: 585 KYFCGLCKLFDDDVSKQQYHCNXXXXXXXXXXENFFHCSKCGCCYSIALKNSHACVEGAM 764
KYFC C FDDD+SK QYHC+ +NFFHC KCGCCYS LK+SH CVE AM
Sbjct: 2 KYFCEKCNFFDDDISKNQYHCDGCGICRTGGMDNFFHCEKCGCCYSNVLKDSHHCVERAM 181
Query: 765 HHDCPICFE 791
H +CP+C+E
Sbjct: 182 HQNCPVCYE 208
>gb|AV936335.1|AV936335 AV936335 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal10p08 3', mRNA sequence
Length = 678
Score = 109 bits (232), Expect(2) = 3e-025
Identities = 38/52 (73%), Positives = 40/52 (76%)
Frame = +3 / -3
Query: 636 QYHCNXXXXXXXXXXENFFHCSKCGCCYSIALKNSHACVEGAMHHDCPICFE 791
+YHC+ ENFFHCSKCGCCYS LKNSHACVEGAMHHDCPICFE
Sbjct: 637 RYHCHGCGICRIGGRENFFHCSKCGCCYSTVLKNSHACVEGAMHHDCPICFE 482
Score = 25.8 bits (50), Expect(2) = 3e-025
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +3 / -1
Query: 600 LCKLFDDDVSK 632
+CKLFDDDV K
Sbjct: 675 VCKLFDDDVLK 643
>gb|BI950307.1|BI950307 HVSMEl0020C23f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0020C23f, mRNA sequence
Length = 466
Score = 104 bits (222), Expect(2) = 6e-025
Identities = 36/50 (72%), Positives = 42/50 (84%)
Frame = +3 / +3
Query: 294 NTDKINGSNPDDYEKFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHN 443
+T +NGSN D+YE+FEKG+M C HYRRRCRIRAPCCN+I DCRHCHN
Sbjct: 315 DTAXVNGSNSDEYERFEKGLME**CAHYRRRCRIRAPCCNDIXDCRHCHN 464
Score = 29.5 bits (58), Expect(2) = 6e-025
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +1 / +1
Query: 145 VLCLQRDSLYWEQRSRWAPWTYTLTLLLLN 234
VLCLQ DS ++ W P + +L LL ++
Sbjct: 169 VLCLQGDSFCTTKQPTWVPCSLSLLLLSMH 258
>gb|CD663353.1|CD663353 UCRHV18_05ah10_b1 Drought-stressed Dicktoo barley epidermis cDNA
library Hordeum vulgare subsp. vulgare cDNA clone
UCRHV18_05ah10, mRNA sequence
Length = 706
Score = 102 bits (218), Expect = 2e-021
Identities = 35/37 (94%), Positives = 35/37 (94%)
Frame = +3 / -2
Query: 681 ENFFHCSKCGCCYSIALKNSHACVEGAMHHDCPICFE 791
ENFFHCSKCGCCYS LKNSHACVEGAMHHDCPICFE
Sbjct: 669 ENFFHCSKCGCCYSTVLKNSHACVEGAMHHDCPICFE 559
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 430,415,017
Number of Sequences: 312970
Number of extensions: 7494507
Number of successful extensions: 66301
Number of sequences better than 1.0e-020: 48
length of database: 58,378,179
effective HSP length: 52
effective length of database: 42,103,739
effective search space used: 8883888929
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)