TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3191495.2.1
(1277 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BQ753409.1|BQ753409 EBan01_SQ004_D03_R anther, yellow st... 227 1e-070
gb|BE230894.2|BE230894 HVSMEg0001I02f Hordeum vulgare pre-a... 228 2e-065
gb|BF622288.3|BF622288 HVSMEa0002I16f Hordeum vulgare seedl... 106 3e-064
gb|BU995044.1|BU995044 HM09A07r HM Hordeum vulgare subsp. v... 234 3e-064
gb|BQ468475.1|BQ468475 HM01F21T HM Hordeum vulgare subsp. v... 219 7e-063
gb|CB883976.1|CB883976 HM06N05r HM Hordeum vulgare subsp. v... 219 7e-063
gb|BI956772.1|BI956772 HVSMEn0005E06f Hordeum vulgare rachi... 189 9e-062
gb|BQ469137.1|BQ469137 HM03I08r HM Hordeum vulgare subsp. v... 219 3e-061
gb|BQ764421.1|BQ764421 EBan01_SQ005_G21_R anther, yellow st... 232 2e-060
gb|BF628930.2|BF628930 HVSMEb0009C23f Hordeum vulgare seedl... 190 4e-059
gb|BI959138.1|BI959138 HVSMEn0018F10f Hordeum vulgare rachi... 191 9e-058
gb|CK123980.1|CK123980 BES1824106f16 BES1824 Hordeum vulgar... 173 3e-056
gb|CB884030.1|CB884030 HM10H05r HM Hordeum vulgare subsp. v... 219 3e-056
gb|CB884057.1|CB884057 HM12C11r HM Hordeum vulgare subsp. v... 219 3e-056
gb|BE196421.3|BE196421 HVSMEh0092D24f Hordeum vulgare 5-45 ... 191 5e-055
gb|CK122346.1|CK122346 BES1824102p12 BES1824 Hordeum vulgar... 144 6e-054
gb|CV063217.1|CV063217 BNEL87h3 Barley EST endosperm librar... 104 3e-053
gb|CV054003.1|CV054003 BNEL105f8 Barley EST endosperm libra... 104 5e-053
gb|BI958784.1|BI958784 HVSMEn0016J13f Hordeum vulgare rachi... 191 5e-053
gb|BF254126.2|BF254126 HVSMEf0003B13f Hordeum vulgare seedl... 158 1e-052
gb|CK122737.1|CK122737 BES1824105j22 BES1824 Hordeum vulgar... 173 1e-052
gb|BI959353.1|BI959353 HVSMEn0019F12f Hordeum vulgare rachi... 191 1e-052
gb|BU995090.1|BU995090 HM09C23r HM Hordeum vulgare subsp. v... 191 2e-052
gb|BI957603.1|BI957603 HVSMEn0010F11f Hordeum vulgare rachi... 187 3e-052
gb|BQ764220.1|BQ764220 EBan01_SQ005_P04_R anther, yellow st... 204 1e-051
gb|BI959698.1|BI959698 HVSMEn0020N13f Hordeum vulgare rachi... 191 2e-051
gb|BI959771.1|BI959771 HVSMEn0021G03f Hordeum vulgare rachi... 191 2e-051
gb|CV063939.1|CV063939 BNEL94h5 Barley EST endosperm librar... 104 8e-051
gb|BU981055.1|BU981055 HA22I03r HA Hordeum vulgare subsp. v... 104 8e-051
gb|BQ458429.1|BQ458429 HA05E07r HA Hordeum vulgare subsp. v... 104 8e-051
gb|BI960458.1|BI960458 HVSMEn0024K16f Hordeum vulgare rachi... 190 8e-051
gb|BG369408.2|BG369408 HVSMEi0024E17f Hordeum vulgare 20 DA... 191 1e-050
gb|BI959654.1|BI959654 HVSMEn0020K03f Hordeum vulgare rachi... 187 4e-049
gb|CV060611.1|CV060611 BNEL5B4 Barley EST endosperm library... 104 6e-049
gb|BI959720.1|BI959720 HVSMEn0020P05f Hordeum vulgare rachi... 188 2e-048
gb|BG365461.2|BG365461 HVSMEi0002M09f Hordeum vulgare 20 DA... 191 2e-048
gb|CA022206.1|CA022206 HZ42H09r HZ Hordeum vulgare subsp. v... 191 8e-048
gb|CA022237.1|CA022237 HZ42I19r HZ Hordeum vulgare subsp. v... 189 2e-047
gb|CA023986.1|CA023986 HZ48A15r HZ Hordeum vulgare subsp. v... 189 2e-047
gb|CV063456.1|CV063456 BNEL8E2 Barley EST endosperm library... 104 5e-047
gb|CA019997.1|CA019997 HV14A15r HV Hordeum vulgare subsp. v... 173 5e-047
gb|AV923254.1|AV923254 AV923254 K. Sato unpublished cDNA li... 187 1e-046
gb|BQ767787.1|BQ767787 EBro08_SQ009_H22_R root, 3 week, dro... 184 2e-046
gb|BI959378.1|BI959378 HVSMEn0019H04f Hordeum vulgare rachi... 186 3e-046
gb|BQ753618.1|BQ753618 EBan01_SQ004_M07_R anther, yellow st... 185 4e-046
gb|CB881182.1|CB881182 HM09A07w HM Hordeum vulgare subsp. v... 124 5e-046
gb|BM442635.2|BM442635 EBan01_SQ003_L19_R anther, yellow st... 134 5e-046
gb|CV061225.1|CV061225 BNEL66d10 Barley EST endosperm libra... 104 7e-046
gb|CV054400.1|CV054400 BNEL10B12 Barley EST endosperm libra... 104 7e-046
gb|BU981754.1|BU981754 HA24I17r HA Hordeum vulgare subsp. v... 104 7e-046
gb|BI949344.1|BI949344 HVSMEl0013G22f Hordeum vulgare spike... 104 7e-046
gb|CV060955.1|CV060955 BNEL63c5 Barley EST endosperm librar... 100 2e-045
gb|BI956858.1|BI956858 HVSMEn0005K24f Hordeum vulgare rachi... 121 6e-045
gb|BU993991.1|BU993991 HM05E17r HM Hordeum vulgare subsp. v... 181 7e-045
gb|BI957183.1|BI957183 HVSMEn0007P24f Hordeum vulgare rachi... 181 9e-045
gb|BQ764067.1|BQ764067 EBro03_SQ006_N05_R root, 3 week, wat... 104 1e-044
gb|BF259343.2|BF259343 HVSMEf0019F11f Hordeum vulgare seedl... 170 3e-044
gb|AL504600.1|AL504600 AL504600 Hordeum vulgare Barke roots... 93 7e-044
gb|BQ758707.1|BQ758707 EBma07_SQ002_G16_R maternal, 21 DPA,... 177 8e-044
gb|BF256653.2|BF256653 HVSMEf0010J19f Hordeum vulgare seedl... 173 1e-043
gb|CK125696.1|CK125696 BES1824110b08 BES1824 Hordeum vulgar... 166 1e-043
gb|AL507275.1|AL507275 AL507275 Hordeum vulgare Barke devel... 158 5e-043
gb|BG310251.1|BG310251 HVSMEc0016K12f Hordeum vulgare seedl... 173 1e-042
gb|BI960089.1|BI960089 HVSMEn0023C15f Hordeum vulgare rachi... 173 1e-042
gb|BM372935.2|BM372935 EBma04_SQ002_H04_R maternal, 10 DPA,... 173 1e-042
gb|BQ465138.1|BQ465138 HU02M06r HU Hordeum vulgare subsp. v... 158 2e-042
gb|BU980194.1|BU980194 HA18P06r HA Hordeum vulgare subsp. v... 173 2e-042
gb|CA031744.1|CA031744 HX11A03r HX Hordeum vulgare subsp. v... 173 2e-042
gb|CB882163.1|CB882163 HL01B01w HL Hordeum vulgare subsp. v... 171 5e-042
gb|BU981183.1|BU981183 HA22N23r HA Hordeum vulgare subsp. v... 100 2e-041
gb|BI950777.1|BI950777 HVSMEl0023C15f Hordeum vulgare spike... 76 2e-041
gb|BI957582.1|BI957582 HVSMEn0010D14f Hordeum vulgare rachi... 169 3e-041
gb|BU978694.1|BU978694 HA14A06r HA Hordeum vulgare subsp. v... 167 9e-041
gb|BE603113.3|BE603113 HVSMEh0101P24f Hordeum vulgare 5-45 ... 166 3e-040
gb|BI959812.1|BI959812 HVSMEn0021L03f Hordeum vulgare rachi... 158 1e-039
gb|BF625170.3|BF625170 HVSMEa0006D08f Hordeum vulgare seedl... 155 2e-039
gb|BQ753440.1|BQ753440 EBan01_SQ004_E11_R anther, yellow st... 162 4e-039
gb|BQ765573.1|BQ765573 EBro03_SQ007_F17_R root, 3 week, wat... 94 5e-039
gb|AV917139.1|AV917139 AV917139 K. Sato unpublished cDNA li... 97 4e-038
gb|CV054086.1|CV054086 BNEL106e9 Barley EST endosperm libra... 101 2e-037
gb|CK124612.1|CK124612 BES1824109m10 BES1824 Hordeum vulgar... 155 4e-037
gb|CA018998.1|CA018998 HV10G08r HV Hordeum vulgare subsp. v... 93 7e-037
gb|BM097618.2|BM097618 EBem04_SQ002_D15_R embryo, 12 DPA, n... 107 7e-037
gb|BF618493.2|BF618493 HVSMEc0005N13f Hordeum vulgare seedl... 154 9e-037
gb|BQ759881.1|BQ759881 EBpi05_SQ004_P16_R pistil, 8 DPA, no... 100 1e-036
gb|BQ753385.1|BQ753385 EBan01_SQ004_C01_R anther, yellow st... 153 2e-036
gb|CW512145.1|CW512145 ToNAR_Morex_118b Morex Exon trapped ... 114 4e-036
gb|BJ463021.1|BJ463021 BJ463021 K. Sato unpublished cDNA li... 68 5e-036
gb|BQ469285.1|BQ469285 HM03P13r HM Hordeum vulgare subsp. v... 149 2e-035
gb|BI960393.1|BI960393 HVSMEn0024H07f Hordeum vulgare rachi... 148 6e-035
gb|BE060246.3|BE060246 HVSMEg0011L08f Hordeum vulgare pre-a... 80 8e-035
gb|BU967134.1|BU967134 HB03G05r BC Hordeum vulgare subsp. v... 104 2e-033
gb|BI956518.1|BI956518 HVSMEn0003O09f Hordeum vulgare rachi... 142 4e-033
gb|CA019796.1|CA019796 HV13D05r HV Hordeum vulgare subsp. v... 140 2e-032
gb|CV058074.1|CV058074 BNEL34a7 Barley EST endosperm librar... 70 2e-031
gb|BF260026.3|BF260026 HVSMEf0020O13f Hordeum vulgare seedl... 98 3e-031
gb|CA004554.1|CA004554 HS17P08r HS Hordeum vulgare subsp. v... 133 1e-030
gb|BF257093.3|BF257093 HVSMEf0011N11f Hordeum vulgare seedl... 64 3e-030
gb|CB884040.1|CB884040 HM11B07r HM Hordeum vulgare subsp. v... 128 7e-029
gb|BM442090.2|BM442090 EBan01_SQ002_C16_R anther, yellow st... 122 2e-028
gb|BI958795.1|BI958795 HVSMEn0016K11f Hordeum vulgare rachi... 126 2e-028
gb|BI959328.1|BI959328 HVSMEn0019E09f Hordeum vulgare rachi... 126 3e-028
gb|BG368652.1|BG368652 HVSMEi0020B24f Hordeum vulgare 20 DA... 64 4e-028
gb|BG368109.2|BG368109 HVSMEi0015L12f Hordeum vulgare 20 DA... 64 1e-027
gb|CA019924.1|CA019924 HV13L18r HV Hordeum vulgare subsp. v... 64 2e-027
gb|CB883447.1|CB883447 HQ02E17w HQ Hordeum vulgare subsp. v... 109 3e-027
gb|BI957249.1|BI957249 HVSMEn0008G13f Hordeum vulgare rachi... 122 3e-027
gb|BI957226.1|BI957226 HVSMEn0008D17f Hordeum vulgare rachi... 122 4e-027
gb|CV061235.1|CV061235 BNEL66d9 Barley EST endosperm librar... 100 5e-027
gb|BF253787.2|BF253787 HVSMEf0002C01f Hordeum vulgare seedl... 89 7e-027
gb|CB882255.1|CB882255 HL01F14w HL Hordeum vulgare subsp. v... 121 1e-026
gb|CV055940.1|CV055940 BNEL12B5 Barley EST endosperm librar... 73 2e-026
gb|CA004842.1|CA004842 HS18N14r HS Hordeum vulgare subsp. v... 120 2e-026
gb|CB881625.1|CB881625 HM10G06w HM Hordeum vulgare subsp. v... 74 2e-026
gb|BE454367.2|BE454367 HVSMEh0093N18f Hordeum vulgare 5-45 ... 84 6e-026
gb|BI956468.1|BI956468 HVSMEn0003I18f Hordeum vulgare rachi... 118 7e-026
gb|BG368126.2|BG368126 HVSMEi0015M21f Hordeum vulgare 20 DA... 64 1e-025
gb|BI954215.1|BI954215 HVSMEm0016K09f Hordeum vulgare green... 116 2e-025
gb|BU983094.1|BU983094 HA28I14r HA Hordeum vulgare subsp. v... 68 7e-025
gb|AV928430.1|AV928430 AV928430 K. Sato unpublished cDNA li... 98 2e-024
gb|BE193443.3|BE193443 HVSMEh0081A10f Hordeum vulgare 5-45 ... 64 2e-023
gb|BU983370.1|BU983370 HA29H20r HA Hordeum vulgare subsp. v... 65 2e-023
gb|BQ459308.1|BQ459308 HA01I15r HA Hordeum vulgare subsp. v... 73 3e-023
gb|BF257559.2|BF257559 HVSMEf0013D22f Hordeum vulgare seedl... 66 6e-023
gb|BQ459628.1|BQ459628 HA08J01r HA Hordeum vulgare subsp. v... 66 6e-023
gb|BQ753555.1|BQ753555 EBan01_SQ004_J12_R anther, yellow st... 98 6e-023
gb|BU980984.1|BU980984 HA22E18r HA Hordeum vulgare subsp. v... 57 8e-023
gb|BM098205.2|BM098205 EBpi03_SQ002_N14_R pistil, 4 DPA, no... 57 8e-023
gb|BI958556.1|BI958556 HVSMEn0015J19f Hordeum vulgare rachi... 64 1e-022
gb|BQ760850.1|BQ760850 EBro03_SQ003_K11_R root, 3 week, wat... 105 7e-022
gb|AV917082.1|AV917082 AV917082 K. Sato unpublished cDNA li... 86 6e-021
>gb|BQ753409.1|BQ753409 EBan01_SQ004_D03_R anther, yellow stage, no treatment, cv Optic,
EBan01 Hordeum vulgare subsp. vulgare cDNA clone
EBan01_SQ004_D03 5', mRNA sequence
Length = 677
Score = 227 bits (491), Expect(2) = 1e-070
Identities = 89/142 (62%), Positives = 104/142 (73%)
Frame = +3 / +2
Query: 126 GPPKVPPGKNITATYGKDWLDAKATWYGKPTXXXXXXXXXXXXYKDVNKPPFNSMGACGN 305
G KVP G NITA Y +W DAK TWYGKPT YK+V+K PF M +CGN
Sbjct: 89 GIAKVPCGPNITANYVSEWKDAKTTWYGKPTGAGPKDNGGACGYKEVDKAPFFGMTSCGN 268
Query: 306 IPIFKDGLGCGSCFEIKCDKPVECSGKPVVVHITDMNYEPIAAYHFDLAGTAFGAMAKKG 485
+PIFKD GCGSCFE+KC KP CSG+P +V ITD N EPIAAYHFDL+G AFG MAKKG
Sbjct: 269 VPIFKDSRGCGSCFELKCTKPGACSGEPTIVTITDKNEEPIAAYHFDLSGHAFGTMAKKG 448
Query: 486 EEEKLRKAGIIDMQFRRVKCKY 551
+E+KLR AG ++++FRRVKCKY
Sbjct: 449 QEQKLRDAGEVEIKFRRVKCKY 514
Score = 136 bits (292), Expect(2) = 9e-036
Identities = 63/111 (56%), Positives = 72/111 (64%)
Frame = -2 / -3
Query: 595 LGPHPFSRWKVTLESYLHLTLRNCMSMMPALRSFSSSPFLAMAPNAVPAKSKWYAAIGS* 416
L P ++ + YLHLT RN +S PA RSF S PFLAM P A P +SKWYAA+GS
Sbjct: 558 LEPFSTWKFTLVPSGYLHLTRRNLISTSPASRSFCSWPFLAMVPKAWPDRSKWYAAMGSS 379
Query: 415 FMSVMCTTTGLPEHSTGLSHLISKQDPQPRPSLKMGMLPHAPMLLKGGLFT 263
F+SVM T G PE + GL HL SKQ+PQPR SLKMG LP M KG L T
Sbjct: 378 FLSVMVTMVGSPEQAPGLVHLSSKQEPQPRLSLKMGTLPQEVMPKKGALST 226
Score = 65.2 bits (136), Expect(3) = 2e-021
Identities = 32/59 (54%), Positives = 37/59 (62%)
Frame = +2 / +1
Query: 269 QAPLQ*HGRMRQHPHLQGWSGLWVLLRDQVR*ACGVLRQARGGAHHGHEL*AYRGVPLR 445
Q PL H +RQ PHLQG L +LLR QV A G+LR+A HH E A+RGVPLR
Sbjct: 232 QGPLLRHDLLRQRPHLQGQPRLRLLLRAQVHQARGLLRRAHHRHHHRQERGAHRGVPLR 408
Score = 60.2 bits (125), Expect(2) = 1e-070
Identities = 24/51 (47%), Positives = 30/51 (58%)
Frame = +3 / +2
Query: 555 SKVTFHLEKGCGPNYLALLVKYXXXXXXXXXXXXKEKGSDTYEPLKHSWGA 707
+KV FH+EKG PNYLAL++K+ K KG D + LK SWGA
Sbjct: 524 TKVNFHVEKGSSPNYLALVIKFLQGDGDVVAVDIKPKGKDKWIELKESWGA 676
Score = 38.2 bits (77), Expect(3) = 2e-021
Identities = 20/48 (41%), Positives = 23/48 (47%)
Frame = +2 / +1
Query: 77 GCDGCGVGVLGERRMVRSSQSPPRQEHHGHLWQGLAGR*SDMVWQADG 220
G GCG G R R Q +HHG L Q + R D+V QADG
Sbjct: 40 GAAGCGGVGRGRVRRARHRQGSLWPQHHGELRQRVERRQDDVVRQADG 183
Score = 36.8 bits (74), Expect(3) = 2e-021
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = +1 / +3
Query: 541 SASTTPRSPSTLKRGAAPTTWRCWSSTSTATVTLWQW 651
S PR ST ++ APTT SS+S AT T W W
Sbjct: 510 STRRAPR*TSTWRKAPAPTTSPW*SSSSRATATWWPW 620
Score = 34.5 bits (69), Expect(2) = 9e-036
Identities = 17/27 (62%), Positives = 17/27 (62%)
Frame = -2 / -3
Query: 205 YHVALASSQSLP*VAVMFLPGGTLGGP 125
YHV LAS SL * AVM P GTL P
Sbjct: 168 YHVVLASFHSLT*FAVMLGPQGTLAMP 88
>gb|BE230894.2|BE230894 HVSMEg0001I02f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0001I02f, mRNA sequence
Length = 606
Score = 228 bits (492), Expect(2) = 2e-065
Identities = 92/163 (56%), Positives = 113/163 (69%)
Frame = +3 / +1
Query: 63 SMRAQVAMAVALVFLVSGAWCGPPKVPPGKNITATYGKDWLDAKATWYGKPTXXXXXXXX 242
S + + A++ +V G KVP G NITATY +W DAK TWYGKPT
Sbjct: 1 SSSSSALLVAAVLAVVVCGAHGIAKVPCGPNITATYVSEWKDAKTTWYGKPTGAGPKDNG 180
Query: 243 XXXXYKDVNKPPFNSMGACGNIPIFKDGLGCGSCFEIKCDKPVECSGKPVVVHITDMNYE 422
YK+V+K PF M +CGN+PIFKDG GCGSCFE+KC KP CSG+P +V ITD N E
Sbjct: 181 GACGYKEVDKAPFFGMTSCGNVPIFKDGRGCGSCFELKCTKPEACSGEPTIVTITDKNEE 360
Query: 423 PIAAYHFDLAGTAFGAMAKKGEEEKLRKAGIIDMQFRRVKCKY 551
PIAAYHFDL+G AFG MAK+G+ +KLR AG ++++FRRVKCKY
Sbjct: 361 PIAAYHFDLSGHAFGTMAKEGQ*QKLRDAGEVEIKFRRVKCKY 489
Score = 135 bits (290), Expect(2) = 3e-036
Identities = 62/111 (55%), Positives = 72/111 (64%)
Frame = -2 / -2
Query: 595 LGPHPFSRWKVTLESYLHLTLRNCMSMMPALRSFSSSPFLAMAPNAVPAKSKWYAAIGS* 416
L P ++ + YLHLT RN +S PA RSF P LAM P A P +SKWYAA+GS
Sbjct: 533 LEPFSTWKFTLVPSGYLHLTRRNLISTSPASRSFCYWPSLAMVPKAWPDRSKWYAAMGSS 354
Query: 415 FMSVMCTTTGLPEHSTGLSHLISKQDPQPRPSLKMGMLPHAPMLLKGGLFT 263
F+SVM T G PE ++GL HL SKQ+PQPRPSLKMG LP M KG L T
Sbjct: 353 FLSVMVTMVGSPEQASGLVHLSSKQEPQPRPSLKMGTLPQEVMPKKGALST 201
Score = 41.8 bits (85), Expect(2) = 2e-065
Identities = 15/22 (68%), Positives = 19/22 (86%)
Frame = +3 / +1
Query: 555 SKVTFHLEKGCGPNYLALLVKY 620
+KV FH+EKG PNYLAL+VK+
Sbjct: 499 TKVNFHVEKGSSPNYLALVVKF 564
Score = 36.8 bits (74), Expect(2) = 3e-036
Identities = 18/27 (66%), Positives = 18/27 (66%)
Frame = -2 / -2
Query: 205 YHVALASSQSLP*VAVMFLPGGTLGGP 125
YHV LAS SL *VAVM P GTL P
Sbjct: 143 YHVVLASFHSLT*VAVMLGPQGTLAMP 63
>gb|BF622288.3|BF622288 HVSMEa0002I16f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0002I16f, mRNA sequence
Length = 851
Score = 106 bits (226), Expect(4) = 3e-064
Identities = 42/59 (71%), Positives = 48/59 (81%)
Frame = +3 / +2
Query: 375 CSGKPVVVHITDMNYEPIAAYHFDLAGTAFGAMAKKGEEEKLRKAGIIDMQFRRVKCKY 551
CSG P V ITDMNY P++ +HFDL+GTAFGAMAK G E+LR AGIIDMQFRRV C+Y
Sbjct: 239 CSGVPETVIITDMNYYPVSRFHFDLSGTAFGAMAKDGRNEELRHAGIIDMQFRRVPCQY 415
Score = 94.1 bits (199), Expect(4) = 3e-064
Identities = 32/60 (53%), Positives = 42/60 (70%)
Frame = +3 / +2
Query: 180 WLDAKATWYGKPTXXXXXXXXXXXXYKDVNKPPFNSMGACGNIPIFKDGLGCGSCFEIKC 359
WLDA+ATWYG P +K+VN PPF++M +CGN P+FKDG GCGSC++I+C
Sbjct: 38 WLDARATWYGAPNGAGPDDNGGACGFKNVNLPPFSAMTSCGNEPLFKDGKGCGSCYQIRC 217
Score = 87.7 bits (185), Expect(4) = 2e-033
Identities = 39/60 (65%), Positives = 42/60 (70%)
Frame = -2 / -3
Query: 550 YLHLTLRNCMSMMPALRSFSSSPFLAMAPNAVPAKSKWYAAIGS*FMSVMCTTTGLPEHS 371
Y H TL NCMSMMPA RS S P LAMAP AVP +SKW G *FMSVM T +G PEH+
Sbjct: 414 YWHGTLLNCMSMMPACRSSSLRPSLAMAPKAVPLRSKWKRDTG**FMSVMITVSGTPEHA 235
Score = 67.5 bits (141), Expect(4) = 3e-064
Identities = 22/52 (42%), Positives = 35/52 (67%)
Frame = +3 / +2
Query: 684 PLKHSWGAIWRKDSDKPLKGPLTVRLTTEGGTKSVYDDVIPANWKANTAYTA 839
P+ SWG+IWR D+ +P++GP ++R+T E G V D V P +W+ N Y++
Sbjct: 587 PMTESWGSIWRMDTRRPMQGPFSLRITNESGKTLVADQVNPGDWEPNEIYSS 742
Score = 41.8 bits (85), Expect(4) = 2e-033
Identities = 18/46 (39%), Positives = 28/46 (60%)
Frame = -2 / -3
Query: 814 QLAGMTSS*TDLVPPSVVRRTVRGPLSGLSLSFLQMAPQECFRGSY 677
Q G+T S T ++P S+V R+ +GP G +S QM PQ+ G++
Sbjct: 717 QSPGLTWSATSVLPDSLVMRSEKGPCMGRRVSIRQMEPQDSVMGTH 580
Score = 40.0 bits (81), Expect(4) = 2e-033
Identities = 18/33 (54%), Positives = 20/33 (60%)
Frame = -2 / -3
Query: 361 SHLISKQDPQPRPSLKMGMLPHAPMLLKGGLFT 263
+H I Q+PQP PSLK G LP M KGG T
Sbjct: 219 THRIW*QEPQPLPSLKSGSLPQEVMAEKGGRLT 121
Score = 35.4 bits (71), Expect(4) = 3e-064
Identities = 14/28 (50%), Positives = 15/28 (53%)
Frame = +1 / +3
Query: 568 STLKRGAAPTTWRCWSSTSTATVTLWQW 651
ST PTTW W ST TAT T +W
Sbjct: 435 STCSTVPTPTTWPSWWSTRTATATWTRW 518
Score = 29.5 bits (58), Expect(4) = 2e-033
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = -1 / -2
Query: 653 VHCHNVTVAVDVLDQQRQVVGAAPLFKVE 567
VH +V VAV VL Q QVVG + VE
Sbjct: 520 VHLVHVAVAVLVLHQDGQVVGVGTVLHVE 434
>gb|BU995044.1|BU995044 HM09A07r HM Hordeum vulgare subsp. vulgare cDNA clone HM09A07
5-PRIME, mRNA sequence
Length = 628
Score = 234 bits (506), Expect(2) = 3e-064
Identities = 93/155 (60%), Positives = 109/155 (70%)
Frame = +3 / +1
Query: 126 GPPKVPPGKNITATYGKDWLDAKATWYGKPTXXXXXXXXXXXXYKDVNKPPFNSMGACGN 305
G KVP G NITATY +W DAK TWYGKPT YK+V+K PF M +CGN
Sbjct: 85 GIAKVPCGPNITATYVSEWKDAKTTWYGKPTGAGPKDNGGACGYKEVDKAPFFGMTSCGN 264
Query: 306 IPIFKDGLGCGSCFEIKCDKPVECSGKPVVVHITDMNYEPIAAYHFDLAGTAFGAMAKKG 485
+PIFKDG GCGSCFE+KC KP CSG+P +V ITD N EPIAAYHFDL+G AFG MAKKG
Sbjct: 265 VPIFKDGRGCGSCFELKCTKPEACSGEPTIVTITDKNEEPIAAYHFDLSGHAFGTMAKKG 444
Query: 486 EEEKLRKAGIIDMQFRRVKCKYDSKVTFHLEKGCG 590
+E+KLR AG ++++FRRVKCKY + G G
Sbjct: 445 QEQKLRDAGEVEIKFRRVKCKYPEGTKVNFHXGEG 549
Score = 145 bits (311), Expect(3) = 5e-045
Identities = 64/109 (58%), Positives = 74/109 (67%)
Frame = -2 / -3
Query: 589 PHPFSRWKVTLESYLHLTLRNCMSMMPALRSFSSSPFLAMAPNAVPAKSKWYAAIGS*FM 410
P P ++ + YLHLT RN +S PA RSF S PFLAM P A P +SKWYAA+GS F+
Sbjct: 548 PSPXWKFTLVPSGYLHLTRRNLISTSPASRSFCSWPFLAMVPKAWPDRSKWYAAMGSSFL 369
Query: 409 SVMCTTTGLPEHSTGLSHLISKQDPQPRPSLKMGMLPHAPMLLKGGLFT 263
SVM T G PE ++GL HL SKQ+PQPRPSLKMG LP M KG L T
Sbjct: 368 SVMVTMVGSPEQASGLVHLSSKQEPQPRPSLKMGTLPQEVMPKKGALST 222
Score = 38.2 bits (77), Expect(3) = 5e-045
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = -1 / -1
Query: 659 LDVHCHNVTVAVDVLDQQRQVVGAAPL 579
LDVH H+V VA++ LD Q +VVGA L
Sbjct: 625 LDVHGHHVAVALEELDNQGEVVGAGAL 545
Score = 36.8 bits (74), Expect(3) = 5e-045
Identities = 18/27 (66%), Positives = 18/27 (66%)
Frame = -2 / -3
Query: 205 YHVALASSQSLP*VAVMFLPGGTLGGP 125
YHV LAS SL *VAVM P GTL P
Sbjct: 164 YHVVLASFHSLT*VAVMLGPQGTLAMP 84
Score = 31.8 bits (63), Expect(2) = 3e-064
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +1 / +3
Query: 577 KRGAAPTTWRCWSSTSTATVTLWQW 651
+R APTT SS+S AT T W W
Sbjct: 543 RRAPAPTTSPWLSSSSRATATWWPW 617
>gb|BQ468475.1|BQ468475 HM01F21T HM Hordeum vulgare subsp. vulgare cDNA clone HM01F21
5-PRIME, mRNA sequence
Length = 650
Score = 219 bits (472), Expect(2) = 7e-063
Identities = 85/139 (61%), Positives = 97/139 (69%)
Frame = +3 / +2
Query: 135 KVPPGKNITATYGKDWLDAKATWYGKPTXXXXXXXXXXXXYKDVNKPPFNSMGACGNIPI 314
KVPPG NIT Y +W AKATWYGK T KDVN P+N M ACGNIPI
Sbjct: 122 KVPPGPNITTNYNMNWTPAKATWYGKATGSGPKDNGGACGIKDVNLAPYNGMIACGNIPI 301
Query: 315 FKDGLGCGSCFEIKCDKPVECSGKPVVVHITDMNYEPIAAYHFDLAGTAFGAMAKKGEEE 494
FKDG GCGSC+E+KC+KP CS KP+ V ITD NYEPIA YH DL+G AFGAMA G E+
Sbjct: 302 FKDGKGCGSCYEVKCNKPPPCSDKPITVFITDKNYEPIAPYHIDLSGKAFGAMATAGNEQ 481
Query: 495 KLRKAGIIDMQFRRVKCKY 551
LR G +++QFRRV+CKY
Sbjct: 482 TLRSFGELELQFRRVRCKY 538
Score = 123 bits (264), Expect(3) = 2e-035
Identities = 57/97 (58%), Positives = 64/97 (65%)
Frame = -2 / -3
Query: 553 SYLHLTLRNCMSMMPALRSFSSSPFLAMAPNAVPAKSKWYAAIGS*FMSVMCTTTGLPEH 374
+YL TL NC S P RS S P +AMAP A+P +S WY A+GS*F+SVM T GL EH
Sbjct: 540 AYLQRTLLNCSSSSPNERSVCSFPAVAMAPKALPDRSMWYGAMGS*FLSVMKTVMGLSEH 361
Query: 373 STGLSHLISKQDPQPRPSLKMGMLPHAPMLLKGGLFT 263
GL HL S Q+P P PSLKMGMLP A M L G FT
Sbjct: 360 GGGLLHLTS*QEPHPLPSLKMGMLPQAIMPL*GARFT 250
Score = 42.8 bits (87), Expect(2) = 7e-063
Identities = 17/29 (58%), Positives = 21/29 (72%)
Frame = +3 / +2
Query: 534 RVKCKYDSKVTFHLEKGCGPNYLALLVKY 620
R K +KVTFH+E G PNYLA+LVK+
Sbjct: 527 RCKYAPGTKVTFHVETGSNPNYLAILVKF 613
Score = 35.0 bits (70), Expect(3) = 2e-035
Identities = 16/34 (47%), Positives = 20/34 (58%)
Frame = -1 / -2
Query: 656 DVHCHNVTVAVDVLDQQRQVVGAAPLFKVEGDLG 555
++H H+V V D LD+ QVV VEGDLG
Sbjct: 649 NLHLHDVAVVGDELDEYGQVVWVRAGLYVEGDLG 548
Score = 29.5 bits (58), Expect(3) = 2e-035
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -2 / -3
Query: 205 YHVALASSQSLP*VAVMFLPGGTL 134
Y VALA Q + *+ VM PGGTL
Sbjct: 192 YQVALAGVQFML*LVVMLGPGGTL 121
>gb|CB883976.1|CB883976 HM06N05r HM Hordeum vulgare subsp. vulgare cDNA clone HM06N05
5-PRIME, mRNA sequence
Length = 616
Score = 219 bits (472), Expect(2) = 7e-063
Identities = 85/139 (61%), Positives = 97/139 (69%)
Frame = +3 / +2
Query: 135 KVPPGKNITATYGKDWLDAKATWYGKPTXXXXXXXXXXXXYKDVNKPPFNSMGACGNIPI 314
KVPPG NIT Y +W AKATWYGK T KDVN P+N M ACGNIPI
Sbjct: 101 KVPPGPNITTNYNMNWTPAKATWYGKATGSGPKDNGGACGIKDVNLAPYNGMIACGNIPI 280
Query: 315 FKDGLGCGSCFEIKCDKPVECSGKPVVVHITDMNYEPIAAYHFDLAGTAFGAMAKKGEEE 494
FKDG GCGSC+E+KC+KP CS KP+ V ITD NYEPIA YH DL+G AFGAMA G E+
Sbjct: 281 FKDGKGCGSCYEVKCNKPPPCSDKPITVFITDKNYEPIAPYHIDLSGKAFGAMATAGNEQ 460
Query: 495 KLRKAGIIDMQFRRVKCKY 551
LR G +++QFRRV+CKY
Sbjct: 461 TLRSFGELELQFRRVRCKY 517
Score = 123 bits (264), Expect(3) = 2e-034
Identities = 57/97 (58%), Positives = 64/97 (65%)
Frame = -2 / -2
Query: 553 SYLHLTLRNCMSMMPALRSFSSSPFLAMAPNAVPAKSKWYAAIGS*FMSVMCTTTGLPEH 374
+YL TL NC S P RS S P +AMAP A+P +S WY A+GS*F+SVM T GL EH
Sbjct: 519 AYLQRTLLNCSSSSPNERSVCSFPAVAMAPKALPDRSMWYGAMGS*FLSVMKTVMGLSEH 340
Query: 373 STGLSHLISKQDPQPRPSLKMGMLPHAPMLLKGGLFT 263
GL HL S Q+P P PSLKMGMLP A M L G FT
Sbjct: 339 GGGLLHLTS*QEPHPLPSLKMGMLPQAIMPL*GARFT 229
Score = 42.8 bits (87), Expect(2) = 7e-063
Identities = 17/29 (58%), Positives = 21/29 (72%)
Frame = +3 / +2
Query: 534 RVKCKYDSKVTFHLEKGCGPNYLALLVKY 620
R K +KVTFH+E G PNYLA+LVK+
Sbjct: 506 RCKYAPGTKVTFHVETGSNPNYLAILVKF 592
Score = 31.3 bits (62), Expect(3) = 2e-034
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = -1 / -1
Query: 644 HNVTVAVDVLDQQRQVVGAAPLFKVEGDLG 555
H+V V D LD+ QVV VEGDLG
Sbjct: 616 HDVAVVGDELDEYGQVVWVRAGLDVEGDLG 527
Score = 29.5 bits (58), Expect(3) = 2e-034
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -2 / -2
Query: 205 YHVALASSQSLP*VAVMFLPGGTL 134
Y VALA Q + *+ VM PGGTL
Sbjct: 171 YQVALAGVQFML*LVVMLGPGGTL 100
>gb|BI956772.1|BI956772 HVSMEn0005E06f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0005E06f, mRNA sequence
Length = 796
Score = 189 bits (408), Expect(2) = 9e-062
Identities = 74/129 (57%), Positives = 90/129 (69%)
Frame = +3 / +1
Query: 165 TYGKDWLDAKATWYGKPTXXXXXXXXXXXXYKDVNKPPFNSMGACGNIPIFKDGLGCGSC 344
T +W DA+ATWYG PT +K+ N+ PF+SMG GN PIFKDG GCGSC
Sbjct: 52 TADPNWEDARATWYGAPTGAGPMDDGGACGFKNTNQYPFSSMGGGGNXPIFKDGKGCGSC 231
Query: 345 FEIKCDKPVECSGKPVVVHITDMNYEPIAAYHFDLAGTAFGAMAKKGEEEKLRKAGIIDM 524
++I+C CSG P V ITDMNY P+A YHFDL+GTAFGAMAK G EKLR +GIID+
Sbjct: 232 YQIRCTNDQSCSGNPETVVITDMNYYPVAKYHFDLSGTAFGAMAKPGLSEKLRHSGIIDI 411
Query: 525 QFRRVKCKY 551
QF+RV C++
Sbjct: 412 QFKRVPCEF 438
Score = 124 bits (265), Expect(2) = 2e-035
Identities = 58/90 (64%), Positives = 61/90 (67%)
Frame = -2 / -3
Query: 544 HLTLRNCMSMMPALRSFSSSPFLAMAPNAVPAKSKWYAAIGS*FMSVMCTTTGLPEHSTG 365
H TL N MSMMP RSFS P LAMAPNAVP +SKWY A G *FMSVM T +GLPE
Sbjct: 431 HGTLLNWMSMMPECRSFSLRPGLAMAPNAVPLRSKWYLATG**FMSVMTTVSGLPEQDWS 252
Query: 364 LSHLISKQDPQPRPSLKMGMLPHAPMLLKG 275
L H I Q+P P PSLKMG LP PM KG
Sbjct: 251 LVHRIW*QEPHPLPSLKMGXLPPPPMEEKG 162
Score = 68.4 bits (143), Expect(2) = 9e-062
Identities = 31/73 (42%), Positives = 41/73 (56%)
Frame = +3 / +1
Query: 558 KVTFHLEKGCGPNYLALLVKYXXXXXXXXXXXXKEKGSDTYEPLKHSWGAIWRKDSDKPL 737
KVTFH+E+G P Y A+LV+Y E S T+ P++ SWG+I R DS
Sbjct: 448 KVTFHVEQGSNPVYFAVLVEYXDGDGDMVQVDLMEANSCTWTPMRESWGSILRLDSGHGW 627
Query: 738 KGPLTVRLTTEGG 776
+ PL+ L EGG
Sbjct: 628 RPPLSFALXNEGG 666
Score = 45.5 bits (93), Expect(2) = 2e-035
Identities = 24/55 (43%), Positives = 29/55 (52%)
Frame = -1 / -2
Query: 722 VLPPDGAPGVLQGLVRVGALLLDVHCHNVTVAVDVLDQQRQVVGAAPLFKVEGDL 558
V P D +P + R G L +VH H+V VAV VL Q +V PL VEG L
Sbjct: 612 VQPQD*SPRLAHRRPRTGVGLHEVHLHHVAVAVXVLHQHGEVHRVRPLLHVEGHL 448
>gb|BQ469137.1|BQ469137 HM03I08r HM Hordeum vulgare subsp. vulgare cDNA clone HM03I08
5-PRIME, mRNA sequence
Length = 616
Score = 219 bits (472), Expect(2) = 3e-061
Identities = 85/139 (61%), Positives = 97/139 (69%)
Frame = +3 / +3
Query: 135 KVPPGKNITATYGKDWLDAKATWYGKPTXXXXXXXXXXXXYKDVNKPPFNSMGACGNIPI 314
KVPPG NIT Y +W AKATWYGK T KDVN P+N M ACGNIPI
Sbjct: 132 KVPPGPNITTNYNMNWTPAKATWYGKATGSGPKDNGGACGIKDVNLAPYNGMIACGNIPI 311
Query: 315 FKDGLGCGSCFEIKCDKPVECSGKPVVVHITDMNYEPIAAYHFDLAGTAFGAMAKKGEEE 494
FKDG GCGSC+E+KC+KP CS KP+ V ITD NYEPIA YH DL+G AFGAMA G E+
Sbjct: 312 FKDGKGCGSCYEVKCNKPPPCSDKPITVFITDKNYEPIAPYHIDLSGKAFGAMATAGNEQ 491
Query: 495 KLRKAGIIDMQFRRVKCKY 551
LR G +++QFRRV+CKY
Sbjct: 492 TLRSFGELELQFRRVRCKY 548
Score = 123 bits (264), Expect(3) = 7e-034
Identities = 57/97 (58%), Positives = 64/97 (65%)
Frame = -2 / -1
Query: 553 SYLHLTLRNCMSMMPALRSFSSSPFLAMAPNAVPAKSKWYAAIGS*FMSVMCTTTGLPEH 374
+YL TL NC S P RS S P +AMAP A+P +S WY A+GS*F+SVM T GL EH
Sbjct: 550 AYLQRTLLNCSSSSPNERSVCSFPAVAMAPKALPDRSMWYGAMGS*FLSVMKTVMGLSEH 371
Query: 373 STGLSHLISKQDPQPRPSLKMGMLPHAPMLLKGGLFT 263
GL HL S Q+P P PSLKMGMLP A M L G FT
Sbjct: 370 GGGLLHLTS*QEPHPLPSLKMGMLPQAIMPL*GARFT 260
Score = 37.3 bits (75), Expect(2) = 3e-061
Identities = 15/26 (57%), Positives = 18/26 (69%)
Frame = +3 / +3
Query: 534 RVKCKYDSKVTFHLEKGCGPNYLALL 611
R K +KVTFH+E G PNYLA+L
Sbjct: 537 RCKYAPGTKVTFHVETGSNPNYLAIL 614
Score = 29.5 bits (58), Expect(3) = 7e-034
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -2 / -1
Query: 205 YHVALASSQSLP*VAVMFLPGGTL 134
Y VALA Q + *+ VM PGGTL
Sbjct: 202 YQVALAGVQFML*LVVMLGPGGTL 131
Score = 29.5 bits (58), Expect(3) = 7e-034
Identities = 13/19 (68%), Positives = 13/19 (68%)
Frame = -2 / -1
Query: 613 TSSAR*LGPHPFSRWKVTL 557
TS AR* G P S WKVTL
Sbjct: 616 TSMAR*FGFEPVSTWKVTL 560
>gb|BQ764421.1|BQ764421 EBan01_SQ005_G21_R anther, yellow stage, no treatment, cv Optic,
EBan01 Hordeum vulgare subsp. vulgare cDNA clone
EBan01_SQ005_G21 5', mRNA sequence
Length = 538
Score = 232 bits (502), Expect = 2e-060
Identities = 92/155 (59%), Positives = 109/155 (70%)
Frame = +3 / +2
Query: 126 GPPKVPPGKNITATYGKDWLDAKATWYGKPTXXXXXXXXXXXXYKDVNKPPFNSMGACGN 305
G KVP G NITA Y +W DAK TWYGKPT YK+V+K PF M +CGN
Sbjct: 29 GIAKVPCGPNITANYVSEWKDAKTTWYGKPTGAGPKDNGGACGYKEVDKAPFFGMTSCGN 208
Query: 306 IPIFKDGLGCGSCFEIKCDKPVECSGKPVVVHITDMNYEPIAAYHFDLAGTAFGAMAKKG 485
+PIFKDG GCGSCFE+KC KP CSG+P +V ITD N EPIAAYHFDL+G AFG MAKKG
Sbjct: 209 VPIFKDGRGCGSCFELKCTKPEACSGEPTIVTITDKNEEPIAAYHFDLSGHAFGTMAKKG 388
Query: 486 EEEKLRKAGIIDMQFRRVKCKYDSKVTFHLEKGCG 590
+E+KLR AG ++++FRRVKCKY + +G G
Sbjct: 389 QEQKLRDAGEVEIKFRRVKCKYPEGTKVNXPRGEG 493
Score = 143 bits (307), Expect(2) = 8e-038
Identities = 64/109 (58%), Positives = 72/109 (66%)
Frame = -2 / -2
Query: 589 PHPFSRWKVTLESYLHLTLRNCMSMMPALRSFSSSPFLAMAPNAVPAKSKWYAAIGS*FM 410
P P + YLHLT RN +S PA RSF S PFLAM P A P +SKWYAA+GS F+
Sbjct: 492 PSPRGXFTFVPSGYLHLTRRNLISTSPASRSFCSWPFLAMVPKAWPDRSKWYAAMGSSFL 313
Query: 409 SVMCTTTGLPEHSTGLSHLISKQDPQPRPSLKMGMLPHAPMLLKGGLFT 263
SVM T G PE ++GL HL SKQ+PQPRPSLKMG LP M KG L T
Sbjct: 312 SVMVTMVGSPEQASGLVHLSSKQEPQPRPSLKMGTLPQEVMPKKGALST 166
Score = 34.5 bits (69), Expect(2) = 8e-038
Identities = 17/27 (62%), Positives = 17/27 (62%)
Frame = -2 / -2
Query: 205 YHVALASSQSLP*VAVMFLPGGTLGGP 125
YHV LAS SL * AVM P GTL P
Sbjct: 108 YHVVLASFHSLT*FAVMLGPQGTLAMP 28
>gb|BF628930.2|BF628930 HVSMEb0009C23f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0009C23f, mRNA sequence
Length = 762
Score = 190 bits (410), Expect(2) = 4e-059
Identities = 78/155 (50%), Positives = 98/155 (63%)
Frame = +3 / +3
Query: 87 AVALVFLVSGAWCGPPKVPPGKNITATYGKDWLDAKATWYGKPTXXXXXXXXXXXXYKDV 266
AVAL +++ A+ G +Y WL A+ATWYG P +K V
Sbjct: 96 AVALAAVLAAAYGGXXAAVNLNTSAVSYSSAWLPARATWYGAPNGAGPDDNGGACGFKHV 275
Query: 267 NKPPFNSMGACGNIPIFKDGLGCGSCFEIKCDKPVECSGKPVVVHITDMNYEPIAAYHFD 446
N+ PF+SM +CGN P+FKDG GCGSC++I+C CSG V ITDMNY P+A YHFD
Sbjct: 276 NQYPFSSMTSCGNQPLFKDGKGCGSCYQIRCSGDRSCSGNIETVMITDMNYYPVAQYHFD 455
Query: 447 LAGTAFGAMAKKGEEEKLRKAGIIDMQFRRVKCKY 551
L+GTAFGA+AK G EKLR +GIID+QFRRV C +
Sbjct: 456 LSGTAFGALAKSGLNEKLRHSGIIDIQFRRVPCNF 560
Score = 107 bits (228), Expect(2) = 1e-030
Identities = 54/95 (56%), Positives = 58/95 (61%)
Frame = -2 / -3
Query: 547 LHLTLRNCMSMMPALRSFSSSPFLAMAPNAVPAKSKWYAAIGS*FMSVMCTTTGLPEHST 368
LH TL N MSMMP RSFS P LA AP AVP +SKWY A G *FMSV+ T + LPE
Sbjct: 556 LHGTLLNWMSMMPEWRSFSLRPDLARAPKAVPLRSKWYWATG**FMSVIITVSMLPEQER 377
Query: 367 GLSHLISKQDPQPRPSLKMGMLPHAPMLLKGGLFT 263
H I Q+PQP PSL G LP M KG FT
Sbjct: 376 SPLHRIW*QEPQPLPSLNRGWLPQEVMEEKGYWFT 272
Score = 58.8 bits (122), Expect(2) = 4e-059
Identities = 23/64 (35%), Positives = 36/64 (56%)
Frame = +3 / +3
Query: 558 KVTFHLEKGCGPNYLALLVKYXXXXXXXXXXXXKEKGSDTYEPLKHSWGAIWRKDSDKPL 737
K+ FH+ +G YLA+L++Y K S ++ ++ SWG+IWR DS+ L
Sbjct: 570 KINFHVVEGSNAVYLAVLIEYEDMDGDVIQVDMKGANSGSWMAMRESWGSIWRMDSNHRL 749
Query: 738 KGPL 749
+GPL
Sbjct: 750 QGPL 761
Score = 46.9 bits (96), Expect(2) = 1e-030
Identities = 28/61 (45%), Positives = 31/61 (50%)
Frame = -1 / -2
Query: 740 LKRFVAVLPPDGAPGVLQGLVRVGALLLDVHCHNVTVAVDVLDQQRQVVGAAPLFKVEGD 561
LK V V PPDG+P + R L VH +V V V VLDQ RQV L VE D
Sbjct: 752 LKPVVGVHPPDGSPRLAHRHPRPRVGSLHVHLDHVAVHVLVLDQHRQVHRVGALHHVEVD 573
Query: 560 L 558
L
Sbjct: 572 L 570
>gb|BI959138.1|BI959138 HVSMEn0018F10f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0018F10f, mRNA sequence
Length = 669
Score = 191 bits (411), Expect(3) = 9e-058
Identities = 74/129 (57%), Positives = 91/129 (70%)
Frame = +3 / +3
Query: 165 TYGKDWLDAKATWYGKPTXXXXXXXXXXXXYKDVNKPPFNSMGACGNIPIFKDGLGCGSC 344
T +W DA+ATWYG PT +K+ N+ PF+SM +CGN PIFKDG GCGSC
Sbjct: 69 TADPNWEDARATWYGAPTGAGPMDDGGACGFKNTNQYPFSSMTSCGNEPIFKDGKGCGSC 248
Query: 345 FEIKCDKPVECSGKPVVVHITDMNYEPIAAYHFDLAGTAFGAMAKKGEEEKLRKAGIIDM 524
++I+C CSG P V ITDMNY P+A YHFDL+GTAFGAMAK G EKLR +GIID+
Sbjct: 249 YQIRCTNDQSCSGNPETVVITDMNYYPVAKYHFDLSGTAFGAMAKPGLSEKLRHSGIIDI 428
Query: 525 QFRRVKCKY 551
QF+RV C++
Sbjct: 429 QFKRVPCEF 455
Score = 124 bits (265), Expect(2) = 4e-034
Identities = 58/90 (64%), Positives = 61/90 (67%)
Frame = -2 / -3
Query: 544 HLTLRNCMSMMPALRSFSSSPFLAMAPNAVPAKSKWYAAIGS*FMSVMCTTTGLPEHSTG 365
H TL N MSMMP RSFS P LAMAPNAVP +SKWY A G *FMSVM T +GLPE
Sbjct: 448 HGTLLNWMSMMPECRSFSLRPGLAMAPNAVPLRSKWYLATG**FMSVMTTVSGLPEQDWS 269
Query: 364 LSHLISKQDPQPRPSLKMGMLPHAPMLLKG 275
L H I Q+P P PSLKMG LPH M KG
Sbjct: 268 LVHRIW*QEPHPLPSLKMGSLPHDVMEEKG 179
Score = 41.4 bits (84), Expect(2) = 4e-034
Identities = 21/43 (48%), Positives = 24/43 (55%)
Frame = -1 / -2
Query: 686 GLVRVGALLLDVHCHNVTVAVDVLDQQRQVVGAAPLFKVEGDL 558
G+ R G L +VH H V VAV VL Q +V PL VEG L
Sbjct: 593 GVPRTGVGLHEVHLHQVAVAVLVLHQHGEVHRVRPLLHVEGHL 465
Score = 38.6 bits (78), Expect(3) = 9e-058
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = +1 / +1
Query: 541 SASTTPRSPSTLKRGAAPTTWRCWSSTSTATVTLWQW 651
++S R PST RG T CW ST TAT T +W
Sbjct: 448 ASSLVSR*PSTWSRGRTRCTSPCWWSTRTATATWCRW 558
Score = 33.6 bits (67), Expect(3) = 9e-058
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +3 / +1
Query: 684 PLKHSWGAIWRKDSDKPLKGPLTV 755
P++ SWG+IWR +S L+ P ++
Sbjct: 592 PMRESWGSIWRVESGHRLQAPFSM 663
>gb|CK123980.1|CK123980 BES1824106f16 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010F166 5-PRIME, mRNA sequence
Length = 750
Score = 173 bits (372), Expect(3) = 3e-056
Identities = 66/121 (54%), Positives = 85/121 (70%)
Frame = +3 / +1
Query: 189 AKATWYGKPTXXXXXXXXXXXXYKDVNKPPFNSMGACGNIPIFKDGLGCGSCFEIKCDKP 368
A+ATWYG P +K+VN+ PF +M +CGN P+FKDG GCG+C++IKC K
Sbjct: 28 ARATWYGAPNGAGPYDNGGACGFKNVNRYPFMAMTSCGNQPLFKDGKGCGACYKIKCTKH 207
Query: 369 VECSGKPVVVHITDMNYEPIAAYHFDLAGTAFGAMAKKGEEEKLRKAGIIDMQFRRVKCK 548
CSG+ V ITDMNY P+A YHFDL+GTAFG +AK G ++LR AGIID+QF RV C+
Sbjct: 208 KACSGRQETVMITDMNYYPVAPYHFDLSGTAFGKLAKPGRNDELRHAGIIDIQFTRVACE 387
Query: 549 Y 551
+
Sbjct: 388 F 390
Score = 100 bits (214), Expect(4) = 3e-031
Identities = 50/94 (53%), Positives = 55/94 (58%)
Frame = -2 / -2
Query: 544 HLTLRNCMSMMPALRSFSSSPFLAMAPNAVPAKSKWYAAIGS*FMSVMCTTTGLPEHSTG 365
H TL N MSMMPA RS S P LA P AVP +SKW A G *FMSV+ T + PEH+
Sbjct: 383 HATLVNWMSMMPACRSSSLRPGLASLPKAVPLRSKW*GATG**FMSVIITVSCRPEHALC 204
Query: 364 LSHLISKQDPQPRPSLKMGMLPHAPMLLKGGLFT 263
HLI PQP PSL G LP M + G FT
Sbjct: 203 FVHLIL*HAPQPLPSLNSGWLPQEVMAMNGYRFT 102
Score = 49.6 bits (102), Expect(3) = 3e-056
Identities = 18/48 (37%), Positives = 29/48 (60%)
Frame = +3 / +1
Query: 663 KGSDTYEPLKHSWGAIWRKDSDKPLKGPLTVRLTTEGGTKSVYDDVIP 806
+G + ++ SWG+IWR DS+ L+ P ++R+ E G V +VIP
Sbjct: 520 RGGGRWTRMRESWGSIWRLDSNHRLQAPFSIRIRNESGKTLVARNVIP 663
Score = 35.4 bits (71), Expect(3) = 3e-056
Identities = 14/24 (58%), Positives = 15/24 (62%)
Frame = +1 / +2
Query: 568 STLKRGAAPTTWRCWSSTSTATVT 639
ST +RG TWR W ST TAT T
Sbjct: 410 STWRRGPTRCTWRSWWSTRTATAT 481
Score = 33.6 bits (67), Expect(4) = 3e-031
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = -1 / -1
Query: 803 DDIVVDGLGASLGSEADGEGSLKRFVAVLPPDGAP 699
DD+ D L ++ADGE L+ V V PDG+P
Sbjct: 660 DDVAGDERLXGLVADADGEWRLETMVGVEAPDGSP 556
Score = 31.3 bits (62), Expect(4) = 3e-031
Identities = 17/35 (48%), Positives = 19/35 (54%)
Frame = -1 / -1
Query: 662 LLDVHCHNVTVAVDVLDQQRQVVGAAPLFKVEGDL 558
L +V H+V VAV VL Q R V PL VE L
Sbjct: 504 LHEVDLHHVAVAVLVLHQDRHVHRVGPLLHVEPHL 400
Score = 25.4 bits (49), Expect(4) = 3e-031
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = -3 / -2
Query: 840 WRCRRCWPSSWQG 802
W RRCW SS+ G
Sbjct: 698 WSGRRCWXSSFXG 660
>gb|CB884030.1|CB884030 HM10H05r HM Hordeum vulgare subsp. vulgare cDNA clone HM10H05
5-PRIME, mRNA sequence
Length = 539
Score = 219 bits (472), Expect = 3e-056
Identities = 85/139 (61%), Positives = 97/139 (69%)
Frame = +3 / +2
Query: 135 KVPPGKNITATYGKDWLDAKATWYGKPTXXXXXXXXXXXXYKDVNKPPFNSMGACGNIPI 314
KVPPG NIT Y +W AKATWYGK T KDVN P+N M ACGNIPI
Sbjct: 101 KVPPGPNITTNYNMNWTPAKATWYGKATGSGPKDNGGACGIKDVNLAPYNGMIACGNIPI 280
Query: 315 FKDGLGCGSCFEIKCDKPVECSGKPVVVHITDMNYEPIAAYHFDLAGTAFGAMAKKGEEE 494
FKDG GCGSC+E+KC+KP CS KP+ V ITD NYEPIA YH DL+G AFGAMA G E+
Sbjct: 281 FKDGKGCGSCYEVKCNKPPPCSDKPITVFITDKNYEPIAPYHIDLSGKAFGAMATAGNEQ 460
Query: 495 KLRKAGIIDMQFRRVKCKY 551
LR G +++QFRRV+CKY
Sbjct: 461 TLRSFGELELQFRRVRCKY 517
Score = 123 bits (264), Expect(2) = 2e-030
Identities = 57/97 (58%), Positives = 64/97 (65%)
Frame = -2 / -3
Query: 553 SYLHLTLRNCMSMMPALRSFSSSPFLAMAPNAVPAKSKWYAAIGS*FMSVMCTTTGLPEH 374
+YL TL NC S P RS S P +AMAP A+P +S WY A+GS*F+SVM T GL EH
Sbjct: 519 AYLQRTLLNCSSSSPNERSVCSFPAVAMAPKALPDRSMWYGAMGS*FLSVMKTVMGLSEH 340
Query: 373 STGLSHLISKQDPQPRPSLKMGMLPHAPMLLKGGLFT 263
GL HL S Q+P P PSLKMGMLP A M L G FT
Sbjct: 339 GGGLLHLTS*QEPHPLPSLKMGMLPQAIMPL*GARFT 229
Score = 29.5 bits (58), Expect(2) = 2e-030
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -2 / -3
Query: 205 YHVALASSQSLP*VAVMFLPGGTL 134
Y VALA Q + *+ VM PGGTL
Sbjct: 171 YQVALAGVQFML*LVVMLGPGGTL 100
>gb|CB884057.1|CB884057 HM12C11r HM Hordeum vulgare subsp. vulgare cDNA clone HM12C11
5-PRIME, mRNA sequence
Length = 539
Score = 219 bits (472), Expect = 3e-056
Identities = 85/139 (61%), Positives = 97/139 (69%)
Frame = +3 / +2
Query: 135 KVPPGKNITATYGKDWLDAKATWYGKPTXXXXXXXXXXXXYKDVNKPPFNSMGACGNIPI 314
KVPPG NIT Y +W AKATWYGK T KDVN P+N M ACGNIPI
Sbjct: 101 KVPPGPNITTNYNMNWTPAKATWYGKATGSGPKDNGGACGIKDVNLAPYNGMIACGNIPI 280
Query: 315 FKDGLGCGSCFEIKCDKPVECSGKPVVVHITDMNYEPIAAYHFDLAGTAFGAMAKKGEEE 494
FKDG GCGSC+E+KC+KP CS KP+ V ITD NYEPIA YH DL+G AFGAMA G E+
Sbjct: 281 FKDGKGCGSCYEVKCNKPPPCSDKPITVFITDKNYEPIAPYHIDLSGKAFGAMATAGNEQ 460
Query: 495 KLRKAGIIDMQFRRVKCKY 551
LR G +++QFRRV+CKY
Sbjct: 461 TLRSFGELELQFRRVRCKY 517
Score = 123 bits (264), Expect(2) = 2e-030
Identities = 57/97 (58%), Positives = 64/97 (65%)
Frame = -2 / -3
Query: 553 SYLHLTLRNCMSMMPALRSFSSSPFLAMAPNAVPAKSKWYAAIGS*FMSVMCTTTGLPEH 374
+YL TL NC S P RS S P +AMAP A+P +S WY A+GS*F+SVM T GL EH
Sbjct: 519 AYLQRTLLNCSSSSPNERSVCSFPAVAMAPKALPDRSMWYGAMGS*FLSVMKTVMGLSEH 340
Query: 373 STGLSHLISKQDPQPRPSLKMGMLPHAPMLLKGGLFT 263
GL HL S Q+P P PSLKMGMLP A M L G FT
Sbjct: 339 GGGLLHLTS*QEPHPLPSLKMGMLPQAIMPL*GARFT 229
Score = 29.5 bits (58), Expect(2) = 2e-030
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -2 / -3
Query: 205 YHVALASSQSLP*VAVMFLPGGTL 134
Y VALA Q + *+ VM PGGTL
Sbjct: 171 YQVALAGVQFML*LVVMLGPGGTL 100
>gb|BE196421.3|BE196421 HVSMEh0092D24f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0092D24f, mRNA sequence
Length = 901
Score = 191 bits (411), Expect(3) = 5e-055
Identities = 74/129 (57%), Positives = 91/129 (70%)
Frame = +3 / +1
Query: 165 TYGKDWLDAKATWYGKPTXXXXXXXXXXXXYKDVNKPPFNSMGACGNIPIFKDGLGCGSC 344
T +W DA+ATWYG PT +K+ N+ PF+SM +CGN PIFKDG GCGSC
Sbjct: 91 TADPNWEDARATWYGAPTGAGPMDDGGACGFKNTNQYPFSSMTSCGNEPIFKDGKGCGSC 270
Query: 345 FEIKCDKPVECSGKPVVVHITDMNYEPIAAYHFDLAGTAFGAMAKKGEEEKLRKAGIIDM 524
++I+C CSG P V ITDMNY P+A YHFDL+GTAFGAMAK G EKLR +GIID+
Sbjct: 271 YQIRCTNDQSCSGNPETVVITDMNYYPVAKYHFDLSGTAFGAMAKPGLSEKLRHSGIIDI 450
Query: 525 QFRRVKCKY 551
QF+RV C++
Sbjct: 451 QFKRVPCEF 477
Score = 124 bits (265), Expect(3) = 3e-031
Identities = 58/90 (64%), Positives = 61/90 (67%)
Frame = -2 / -3
Query: 544 HLTLRNCMSMMPALRSFSSSPFLAMAPNAVPAKSKWYAAIGS*FMSVMCTTTGLPEHSTG 365
H TL N MSMMP RSFS P LAMAPNAVP +SKWY A G *FMSVM T +GLPE
Sbjct: 470 HGTLLNWMSMMPECRSFSLRPGLAMAPNAVPLRSKWYLATG**FMSVMTTVSGLPEQDWS 291
Query: 364 LSHLISKQDPQPRPSLKMGMLPHAPMLLKG 275
L H I Q+P P PSLKMG LPH M KG
Sbjct: 290 LVHRIW*QEPHPLPSLKMGSLPHDVMEEKG 201
Score = 31.8 bits (63), Expect(3) = 5e-055
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +3 / +3
Query: 675 TYEPLKHSWGAIWRKDSDKPLKGPLT 752
T+ P++ SWG+IW D L+ P +
Sbjct: 603 TWTPMRESWGSIWGLDFGHRLQAPFS 680
Score = 31.3 bits (62), Expect(3) = 5e-055
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +1 / +1
Query: 565 PSTLKRGAAPTTWRCWSSTSTATVT 639
PST R T CW ST TAT T
Sbjct: 493 PSTWSRXRTRCTSPCWGSTKTATAT 567
Score = 26.3 bits (51), Expect(3) = 3e-031
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = -1 / -3
Query: 644 HNVTVAVDVLDQQRQVVGAAPLFKVEGDL 558
H+V VAV VL Q +V L VEG L
Sbjct: 572 HHVAVAVFVLPQHGEVHRVRXLLHVEGHL 486
Score = 23.5 bits (45), Expect(3) = 3e-031
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -1 / -3
Query: 749 EGSLKRFVAVLPPDGAP 699
+G LK V PPDG+P
Sbjct: 677 KGRLKPVPEVKPPDGSP 627
>gb|CK122346.1|CK122346 BES1824102p12 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010P122 5-PRIME, mRNA sequence
Length = 717
Score = 144 bits (309), Expect(3) = 6e-054
Identities = 54/91 (59%), Positives = 70/91 (76%)
Frame = +3 / +1
Query: 279 FNSMGACGNIPIFKDGLGCGSCFEIKCDKPVECSGKPVVVHITDMNYEPIAAYHFDLAGT 458
F SM +CGN P+FKDG GCGSC++I+C K CSG+ V ITDMNY P+A YHFDL+GT
Sbjct: 1 FASMTSCGNQPLFKDGKGCGSCYKIRCRKDQSCSGRTETVIITDMNYYPVAPYHFDLSGT 180
Query: 459 AFGAMAKKGEEEKLRKAGIIDMQFRRVKCKY 551
AFG +AK G ++LR +GIID++F RV C++
Sbjct: 181 AFGRLAKPGLNDRLRHSGIIDIEFTRVPCEF 273
Score = 93.2 bits (197), Expect(4) = 1e-033
Identities = 46/86 (53%), Positives = 49/86 (56%)
Frame = -2 / -2
Query: 544 HLTLRNCMSMMPALRSFSSSPFLAMAPNAVPAKSKWYAAIGS*FMSVMCTTTGLPEHSTG 365
H T N MSMMP RS S SP A PNAVP +SKW A G *FMSVM T + LPE
Sbjct: 266 HGTRVNSMSMMPEWRSLSLSPGFASLPNAVPLRSKW*GATG**FMSVMITVSVLPEQDWS 87
Query: 364 LSHLISKQDPQPRPSLKMGMLPHAPM 287
HLI +P P PSL G LP M
Sbjct: 86 FLHLIL*HEPHPLPSLNNGWLPQEVM 9
Score = 66.1 bits (138), Expect(3) = 6e-054
Identities = 23/56 (41%), Positives = 35/56 (62%)
Frame = +3 / +1
Query: 666 GSDTYEPLKHSWGAIWRKDSDKPLKGPLTVRLTTEGGTKSVYDDVIPANWKANTAY 833
G + ++ SWG++WR DS+ L+ P ++R+ E G V + VIPANW+ NT Y
Sbjct: 400 GGGKWTRMRESWGSVWRLDSNHRLQAPFSIRIRNESGKTLVANKVIPANWRPNTFY 567
Score = 40.0 bits (81), Expect(3) = 6e-054
Identities = 17/37 (45%), Positives = 22/37 (59%)
Frame = +1 / +2
Query: 541 SASTTPRSPSTLKRGAAPTTWRCWSSTSTATVTLWQW 651
++S RS ST + P+T RCW ST TAT T +W
Sbjct: 266 ASSRGSRSGSTWRSTRTPSTSRCWWSTRTATATWCRW 376
Score = 40.0 bits (81), Expect(4) = 1e-033
Identities = 19/36 (52%), Positives = 23/36 (63%)
Frame = -1 / -1
Query: 806 RDDIVVDGLGASLGSEADGEGSLKRFVAVLPPDGAP 699
RDD+V D A L ++ADGE L+ V V PDGAP
Sbjct: 540 RDDLVGDERLAGLVADADGEWRLEAVVGVEAPDGAP 433
Score = 38.6 bits (78), Expect(4) = 1e-033
Identities = 19/35 (54%), Positives = 22/35 (62%)
Frame = -1 / -1
Query: 662 LLDVHCHNVTVAVDVLDQQRQVVGAAPLFKVEGDL 558
L +VH H+V VAV VL Q R+V G L VE DL
Sbjct: 387 LHEVHLHHVAVAVLVLHQHREVDGVRVLLHVEPDL 283
Score = 27.6 bits (54), Expect(4) = 1e-033
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -3 / -3
Query: 831 RRCWPSSWQG* 799
RRCW SSW G*
Sbjct: 565 RRCWASSWPG* 533
>gb|CV063217.1|CV063217 BNEL87h3 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL87h3 5' similar to Oryza sativa
beta-expansin, mRNA sequence
Length = 701
Score = 104 bits (222), Expect(4) = 3e-053
Identities = 40/59 (67%), Positives = 49/59 (83%)
Frame = +3 / +3
Query: 375 CSGKPVVVHITDMNYEPIAAYHFDLAGTAFGAMAKKGEEEKLRKAGIIDMQFRRVKCKY 551
CSG P V ITDMNY+P++ YHFDL+GTAFGAMAK G ++LR AGII+MQF+RV C+Y
Sbjct: 327 CSGVPKTVIITDMNYDPVSRYHFDLSGTAFGAMAKYGRNDELRHAGIINMQFKRVPCQY 503
Score = 100 bits (213), Expect(4) = 3e-053
Identities = 35/60 (58%), Positives = 44/60 (73%)
Frame = +3 / +3
Query: 180 WLDAKATWYGKPTXXXXXXXXXXXXYKDVNKPPFNSMGACGNIPIFKDGLGCGSCFEIKC 359
WLDAKATWYG+PT +K+VN PPF+SM +CGN P+FKDG GCGSC++I+C
Sbjct: 126 WLDAKATWYGRPTGAGPDDNGGACGFKNVNLPPFSSMTSCGNQPLFKDGKGCGSCYQIRC 305
Score = 87.2 bits (184), Expect(3) = 1e-024
Identities = 38/60 (63%), Positives = 42/60 (70%)
Frame = -2 / -2
Query: 550 YLHLTLRNCMSMMPALRSFSSSPFLAMAPNAVPAKSKWYAAIGS*FMSVMCTTTGLPEHS 371
Y H TL NCM +MPA RS S P+LAMAP AVP +SKW GS*FMSVM T G PEH+
Sbjct: 502 YWHGTLLNCMLIMPAWRSSSLRPYLAMAPKAVPLRSKW*RETGS*FMSVMITVLGTPEHA 323
Score = 41.4 bits (84), Expect(3) = 1e-024
Identities = 19/32 (59%), Positives = 20/32 (62%)
Frame = -2 / -2
Query: 358 HLISKQDPQPRPSLKMGMLPHAPMLLKGGLFT 263
HLI Q+PQP PSLK G LP M KGG T
Sbjct: 304 HLIW*QEPQPLPSLKSGWLPQEVMEEKGGKLT 209
Score = 35.0 bits (70), Expect(4) = 3e-053
Identities = 12/20 (60%), Positives = 17/20 (85%)
Frame = +3 / +3
Query: 561 VTFHLEKGCGPNYLALLVKY 620
VTFH+E+G P Y+A+LV+Y
Sbjct: 516 VTFHVEEGSNPFYMAILVEY 575
Score = 26.3 bits (51), Expect(4) = 3e-053
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = +3 / +3
Query: 684 PLKHSWGAIW 713
P+K SWG+IW
Sbjct: 672 PMKESWGSIW 701
Score = 23.1 bits (44), Expect(3) = 1e-024
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -2 / -2
Query: 205 YHVALASSQ 179
YHVALASSQ
Sbjct: 151 YHVALASSQ 125
>gb|CV054003.1|CV054003 BNEL105f8 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL105f8 5' similar to Oryza sativa
beta-expansin, mRNA sequence
Length = 702
Score = 104 bits (222), Expect(4) = 5e-053
Identities = 40/59 (67%), Positives = 49/59 (83%)
Frame = +3 / +3
Query: 375 CSGKPVVVHITDMNYEPIAAYHFDLAGTAFGAMAKKGEEEKLRKAGIIDMQFRRVKCKY 551
CSG P V ITDMNY+P++ YHFDL+GTAFGAMAK G ++LR AGII+MQF+RV C+Y
Sbjct: 321 CSGVPKTVIITDMNYDPVSRYHFDLSGTAFGAMAKYGRNDELRHAGIINMQFKRVPCQY 497
Score = 100 bits (213), Expect(4) = 5e-053
Identities = 35/60 (58%), Positives = 44/60 (73%)
Frame = +3 / +3
Query: 180 WLDAKATWYGKPTXXXXXXXXXXXXYKDVNKPPFNSMGACGNIPIFKDGLGCGSCFEIKC 359
WLDAKATWYG+PT +K+VN PPF+SM +CGN P+FKDG GCGSC++I+C
Sbjct: 120 WLDAKATWYGRPTGAGPDDNGGACGFKNVNLPPFSSMTSCGNQPLFKDGKGCGSCYQIRC 299
Score = 87.2 bits (184), Expect(3) = 1e-024
Identities = 38/60 (63%), Positives = 42/60 (70%)
Frame = -2 / -3
Query: 550 YLHLTLRNCMSMMPALRSFSSSPFLAMAPNAVPAKSKWYAAIGS*FMSVMCTTTGLPEHS 371
Y H TL NCM +MPA RS S P+LAMAP AVP +SKW GS*FMSVM T G PEH+
Sbjct: 496 YWHGTLLNCMLIMPAWRSSSLRPYLAMAPKAVPLRSKW*RETGS*FMSVMITVLGTPEHA 317
Score = 41.4 bits (84), Expect(3) = 1e-024
Identities = 19/32 (59%), Positives = 20/32 (62%)
Frame = -2 / -3
Query: 358 HLISKQDPQPRPSLKMGMLPHAPMLLKGGLFT 263
HLI Q+PQP PSLK G LP M KGG T
Sbjct: 298 HLIW*QEPQPLPSLKSGWLPQEVMEEKGGKLT 203
Score = 35.0 bits (70), Expect(4) = 5e-053
Identities = 12/20 (60%), Positives = 17/20 (85%)
Frame = +3 / +3
Query: 561 VTFHLEKGCGPNYLALLVKY 620
VTFH+E+G P Y+A+LV+Y
Sbjct: 510 VTFHVEEGSNPFYMAILVEY 569
Score = 25.4 bits (49), Expect(4) = 5e-053
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = +3 / +3
Query: 684 PLKHSWGAIWR 716
P+K SW +IWR
Sbjct: 666 PMKESWXSIWR 698
Score = 23.1 bits (44), Expect(3) = 1e-024
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -2 / -3
Query: 205 YHVALASSQ 179
YHVALASSQ
Sbjct: 145 YHVALASSQ 119
>gb|BI958784.1|BI958784 HVSMEn0016J13f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0016J13f, mRNA sequence
Length = 656
Score = 191 bits (411), Expect(2) = 5e-053
Identities = 74/129 (57%), Positives = 91/129 (70%)
Frame = +3 / +3
Query: 165 TYGKDWLDAKATWYGKPTXXXXXXXXXXXXYKDVNKPPFNSMGACGNIPIFKDGLGCGSC 344
T +W DA+ATWYG PT +K+ N+ PF+SM +CGN PIFKDG GCGSC
Sbjct: 165 TADPNWEDARATWYGAPTGAGPMDDGGACGFKNTNQYPFSSMTSCGNEPIFKDGKGCGSC 344
Query: 345 FEIKCDKPVECSGKPVVVHITDMNYEPIAAYHFDLAGTAFGAMAKKGEEEKLRKAGIIDM 524
++I+C CSG P V ITDMNY P+A YHFDL+GTAFGAMAK G EKLR +GIID+
Sbjct: 345 YQIRCTNDQSCSGNPETVVITDMNYYPVAKYHFDLSGTAFGAMAKPGLSEKLRHSGIIDI 524
Query: 525 QFRRVKCKY 551
QF+RV C++
Sbjct: 525 QFKRVPCEF 551
Score = 124 bits (265), Expect(2) = 8e-032
Identities = 58/90 (64%), Positives = 61/90 (67%)
Frame = -2 / -2
Query: 544 HLTLRNCMSMMPALRSFSSSPFLAMAPNAVPAKSKWYAAIGS*FMSVMCTTTGLPEHSTG 365
H TL N MSMMP RSFS P LAMAPNAVP +SKWY A G *FMSVM T +GLPE
Sbjct: 544 HGTLLNWMSMMPECRSFSLRPGLAMAPNAVPLRSKWYLATG**FMSVMTTVSGLPEQDWS 365
Query: 364 LSHLISKQDPQPRPSLKMGMLPHAPMLLKG 275
L H I Q+P P PSLKMG LPH M KG
Sbjct: 364 LVHRIW*QEPHPLPSLKMGSLPHDVMEEKG 275
Score = 37.7 bits (76), Expect(2) = 5e-053
Identities = 17/37 (45%), Positives = 19/37 (51%)
Frame = +1 / +1
Query: 541 SASTTPRSPSTLKRGAAPTTWRCWSSTSTATVTLWQW 651
++S R PST RG T CW ST TAT T W
Sbjct: 544 ASSLVSR*PSTWSRGRTRCTSPCWWSTRTATATWCXW 654
Score = 33.6 bits (67), Expect(2) = 8e-032
Identities = 17/32 (53%), Positives = 18/32 (56%)
Frame = -1 / -1
Query: 653 VHCHNVTVAVDVLDQQRQVVGAAPLFKVEGDL 558
VH H V VAV VL Q +V PL VEG L
Sbjct: 656 VHXHXVAVAVLVLHQHGEVHRVRPLLHVEGHL 561
>gb|BF254126.2|BF254126 HVSMEf0003B13f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0003B13f, mRNA sequence
Length = 789
Score = 158 bits (339), Expect(3) = 1e-052
Identities = 59/99 (59%), Positives = 77/99 (77%)
Frame = +3 / +2
Query: 255 YKDVNKPPFNSMGACGNIPIFKDGLGCGSCFEIKCDKPVECSGKPVVVHITDMNYEPIAA 434
+K+VN+ PF +M +CGN P+FKDG GCG+C++IKC K CSG+ V ITDMNY P+A
Sbjct: 38 FKNVNRYPFMAMTSCGNQPLFKDGKGCGACYKIKCTKHKACSGRQETVMITDMNYYPVAP 217
Query: 435 YHFDLAGTAFGAMAKKGEEEKLRKAGIIDMQFRRVKCKY 551
YHFDL+GTAFG +AK G ++LR AGIID+QF RV C++
Sbjct: 218 YHFDLSGTAFGKLAKPGRNDELRHAGIIDIQFTRVACEF 334
Score = 100 bits (214), Expect(2) = 3e-024
Identities = 50/94 (53%), Positives = 55/94 (58%)
Frame = -2 / -1
Query: 544 HLTLRNCMSMMPALRSFSSSPFLAMAPNAVPAKSKWYAAIGS*FMSVMCTTTGLPEHSTG 365
H TL N MSMMPA RS S P LA P AVP +SKW A G *FMSV+ T + PEH+
Sbjct: 327 HATLVNWMSMMPACRSSSLRPGLASLPKAVPLRSKW*GATG**FMSVIITVSCRPEHALC 148
Query: 364 LSHLISKQDPQPRPSLKMGMLPHAPMLLKGGLFT 263
HLI PQP PSL G LP M + G FT
Sbjct: 147 FVHLIL*HAPQPLPSLNSGWLPQEVMAMNGYRFT 46
Score = 52.8 bits (109), Expect(3) = 1e-052
Identities = 21/57 (36%), Positives = 31/57 (54%)
Frame = +3 / +2
Query: 663 KGSDTYEPLKHSWGAIWRKDSDKPLKGPLTVRLTTEGGTKSVYDDVIPANWKANTAY 833
+G + ++ SWG IWR DS+ L+ P ++R+ E G V VIP + NT Y
Sbjct: 464 RGGGRWTRMRESWGFIWRLDSNHRLQAPFSIRIRNESGQTLVAR*VIPKKGRPNTLY 634
Score = 35.4 bits (71), Expect(3) = 1e-052
Identities = 14/24 (58%), Positives = 15/24 (62%)
Frame = +1 / +3
Query: 568 STLKRGAAPTTWRCWSSTSTATVT 639
ST +RG TWR W ST TAT T
Sbjct: 354 STWRRGPTRCTWRSWWSTRTATAT 425
Score = 31.3 bits (62), Expect(2) = 3e-024
Identities = 17/35 (48%), Positives = 19/35 (54%)
Frame = -1 / -3
Query: 662 LLDVHCHNVTVAVDVLDQQRQVVGAAPLFKVEGDL 558
L +V H+V VAV VL Q R V PL VE L
Sbjct: 448 LHEVDLHHVAVAVLVLHQDRHVHRVGPLLHVEPHL 344
>gb|CK122737.1|CK122737 BES1824105j22 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010J225 5-PRIME, mRNA sequence
Length = 776
Score = 173 bits (372), Expect(3) = 1e-052
Identities = 66/121 (54%), Positives = 85/121 (70%)
Frame = +3 / +1
Query: 189 AKATWYGKPTXXXXXXXXXXXXYKDVNKPPFNSMGACGNIPIFKDGLGCGSCFEIKCDKP 368
A+ATWYG P +K+VN+ PF +M +CGN P+FKDG GCG+C++IKC K
Sbjct: 145 ARATWYGAPNGAGPYDNGGACGFKNVNRYPFMAMTSCGNQPLFKDGKGCGACYKIKCTKH 324
Query: 369 VECSGKPVVVHITDMNYEPIAAYHFDLAGTAFGAMAKKGEEEKLRKAGIIDMQFRRVKCK 548
CSG+ V ITDMNY P+A YHFDL+GTAFG +AK G ++LR AGIID+QF RV C+
Sbjct: 325 KACSGRQETVMITDMNYYPVAPYHFDLSGTAFGKLAKPGRNDELRHAGIIDIQFTRVACE 504
Query: 549 Y 551
+
Sbjct: 505 F 507
Score = 100 bits (214), Expect(3) = 2e-026
Identities = 50/94 (53%), Positives = 55/94 (58%)
Frame = -2 / -1
Query: 544 HLTLRNCMSMMPALRSFSSSPFLAMAPNAVPAKSKWYAAIGS*FMSVMCTTTGLPEHSTG 365
H TL N MSMMPA RS S P LA P AVP +SKW A G *FMSV+ T + PEH+
Sbjct: 500 HATLVNWMSMMPACRSSSLRPGLASLPKAVPLRSKW*GATG**FMSVIITVSCRPEHALC 321
Query: 364 LSHLISKQDPQPRPSLKMGMLPHAPMLLKGGLFT 263
HLI PQP PSL G LP M + G FT
Sbjct: 320 FVHLIL*HAPQPLPSLNSGWLPQEVMAMNGYRFT 219
Score = 37.7 bits (76), Expect(3) = 1e-052
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +3 / +3
Query: 687 LKHSWGAIWRKDSDKPLKGPLTVRLTTEGGTK 782
+ SWG+IW DS L+ P ++R+ E G K
Sbjct: 663 MPESWGSIWGLDSXNRLQXPXSIRIRNESGKK 758
Score = 35.4 bits (71), Expect(3) = 1e-052
Identities = 14/24 (58%), Positives = 15/24 (62%)
Frame = +1 / +2
Query: 568 STLKRGAAPTTWRCWSSTSTATVT 639
ST +RG TWR W ST TAT T
Sbjct: 527 STWRRGPTRCTWRSWWSTRTATAT 598
Score = 30.9 bits (61), Expect(3) = 2e-026
Identities = 16/33 (48%), Positives = 18/33 (54%)
Frame = -1 / -3
Query: 656 DVHCHNVTVAVDVLDQQRQVVGAAPLFKVEGDL 558
+V H+V VAV VL Q R V PL VE L
Sbjct: 615 EVDLHHVAVAVLVLHQDRHVHRVGPLLHVEPHL 517
Score = 25.8 bits (50), Expect(3) = 2e-026
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = -1 / -1
Query: 800 DIVVDGLGASLGSEADGEGSLKRFVAVLPPDGAP 699
D+ L L ++ADG L+ V PDG+P
Sbjct: 776 DVAGXELLXGLVADADGXWXLETIXGVEAPDGSP 675
>gb|BI959353.1|BI959353 HVSMEn0019F12f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0019F12f, mRNA sequence
Length = 669
Score = 191 bits (411), Expect(2) = 1e-052
Identities = 74/129 (57%), Positives = 91/129 (70%)
Frame = +3 / +2
Query: 165 TYGKDWLDAKATWYGKPTXXXXXXXXXXXXYKDVNKPPFNSMGACGNIPIFKDGLGCGSC 344
T +W DA+ATWYG PT +K+ N+ PF+SM +CGN PIFKDG GCGSC
Sbjct: 179 TADPNWEDARATWYGAPTGAGPMDDGGACGFKNTNQYPFSSMTSCGNEPIFKDGKGCGSC 358
Query: 345 FEIKCDKPVECSGKPVVVHITDMNYEPIAAYHFDLAGTAFGAMAKKGEEEKLRKAGIIDM 524
++I+C CSG P V ITDMNY P+A YHFDL+GTAFGAMAK G EKLR +GIID+
Sbjct: 359 YQIRCTNDQSCSGNPETVVITDMNYYPVAKYHFDLSGTAFGAMAKPGLSEKLRHSGIIDI 538
Query: 525 QFRRVKCKY 551
QF+RV C++
Sbjct: 539 QFKRVPCEF 565
Score = 124 bits (265), Expect(2) = 3e-032
Identities = 58/90 (64%), Positives = 61/90 (67%)
Frame = -2 / -1
Query: 544 HLTLRNCMSMMPALRSFSSSPFLAMAPNAVPAKSKWYAAIGS*FMSVMCTTTGLPEHSTG 365
H TL N MSMMP RSFS P LAMAPNAVP +SKWY A G *FMSVM T +GLPE
Sbjct: 558 HGTLLNWMSMMPECRSFSLRPGLAMAPNAVPLRSKWYLATG**FMSVMTTVSGLPEQDWS 379
Query: 364 LSHLISKQDPQPRPSLKMGMLPHAPMLLKG 275
L H I Q+P P PSLKMG LPH M KG
Sbjct: 378 LVHRIW*QEPHPLPSLKMGSLPHDVMEEKG 289
Score = 36.3 bits (73), Expect(2) = 1e-052
Identities = 15/29 (51%), Positives = 16/29 (55%)
Frame = +1 / +2
Query: 565 PSTLKRGAAPTTWRCWSSTSTATVTLWQW 651
PST RG T CW ST TAT T +W
Sbjct: 581 PSTWSRGRTRCTSPCWWSTRTATATWCKW 667
Score = 35.0 bits (70), Expect(2) = 3e-032
Identities = 17/32 (53%), Positives = 19/32 (59%)
Frame = -1 / -1
Query: 653 VHCHNVTVAVDVLDQQRQVVGAAPLFKVEGDL 558
VH H+V VAV VL Q +V PL VEG L
Sbjct: 669 VHLHHVAVAVLVLHQHGEVHRVRPLLHVEGHL 574
>gb|BU995090.1|BU995090 HM09C23r HM Hordeum vulgare subsp. vulgare cDNA clone HM09C23
5-PRIME, mRNA sequence
Length = 653
Score = 191 bits (411), Expect(2) = 2e-052
Identities = 74/129 (57%), Positives = 91/129 (70%)
Frame = +3 / +1
Query: 165 TYGKDWLDAKATWYGKPTXXXXXXXXXXXXYKDVNKPPFNSMGACGNIPIFKDGLGCGSC 344
T +W DA+ATWYG PT +K+ N+ PF+SM +CGN PIFKDG GCGSC
Sbjct: 187 TADPNWEDARATWYGAPTGAGPMDDGGACGFKNTNQYPFSSMTSCGNEPIFKDGKGCGSC 366
Query: 345 FEIKCDKPVECSGKPVVVHITDMNYEPIAAYHFDLAGTAFGAMAKKGEEEKLRKAGIIDM 524
++I+C CSG P V ITDMNY P+A YHFDL+GTAFGAMAK G EKLR +GIID+
Sbjct: 367 YQIRCTNDQSCSGNPETVVITDMNYYPVAKYHFDLSGTAFGAMAKPGLSEKLRHSGIIDI 546
Query: 525 QFRRVKCKY 551
QF+RV C++
Sbjct: 547 QFKRVPCEF 573
Score = 124 bits (265), Expect(2) = 5e-030
Identities = 58/90 (64%), Positives = 61/90 (67%)
Frame = -2 / -1
Query: 544 HLTLRNCMSMMPALRSFSSSPFLAMAPNAVPAKSKWYAAIGS*FMSVMCTTTGLPEHSTG 365
H TL N MSMMP RSFS P LAMAPNAVP +SKWY A G *FMSVM T +GLPE
Sbjct: 566 HGTLLNWMSMMPECRSFSLRPGLAMAPNAVPLRSKWYLATG**FMSVMTTVSGLPEQDWS 387
Query: 364 LSHLISKQDPQPRPSLKMGMLPHAPMLLKG 275
L H I Q+P P PSLKMG LPH M KG
Sbjct: 386 LVHRIW*QEPHPLPSLKMGSLPHDVMEEKG 297
Score = 35.9 bits (72), Expect(2) = 2e-052
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +3 / +1
Query: 558 KVTFHLEKGCGPNYLALLVKY 620
KVTFH+E+G P Y A+LV+Y
Sbjct: 583 KVTFHVEQGSNPVYFAVLVEY 645
Score = 27.6 bits (54), Expect(2) = 5e-030
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = -2 / -1
Query: 619 YLTSSAR*LGPHPFSRWKVTL 557
Y TS+A+ G P S WKVTL
Sbjct: 644 YSTSTAKYTGFDPCSTWKVTL 582
>gb|BI957603.1|BI957603 HVSMEn0010F11f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0010F11f, mRNA sequence
Length = 630
Score = 187 bits (402), Expect(2) = 3e-052
Identities = 73/129 (56%), Positives = 90/129 (69%)
Frame = +3 / +1
Query: 165 TYGKDWLDAKATWYGKPTXXXXXXXXXXXXYKDVNKPPFNSMGACGNIPIFKDGLGCGSC 344
T +W DA+ATWYG T +K+ N+ PF+SM +CGN PIFKDG GCGSC
Sbjct: 127 TADPNWEDARATWYGARTGAGPMDDGGACGFKNTNQYPFSSMTSCGNEPIFKDGKGCGSC 306
Query: 345 FEIKCDKPVECSGKPVVVHITDMNYEPIAAYHFDLAGTAFGAMAKKGEEEKLRKAGIIDM 524
++I+C CSG P V ITDMNY P+A YHFDL+GTAFGAMAK G EKLR +GIID+
Sbjct: 307 YQIRCTNDQSCSGNPETVVITDMNYYPVAKYHFDLSGTAFGAMAKPGLSEKLRHSGIIDI 486
Query: 525 QFRRVKCKY 551
QF+RV C++
Sbjct: 487 QFKRVPCEF 513
Score = 124 bits (265), Expect(2) = 2e-032
Identities = 58/90 (64%), Positives = 61/90 (67%)
Frame = -2 / -2
Query: 544 HLTLRNCMSMMPALRSFSSSPFLAMAPNAVPAKSKWYAAIGS*FMSVMCTTTGLPEHSTG 365
H TL N MSMMP RSFS P LAMAPNAVP +SKWY A G *FMSVM T +GLPE
Sbjct: 506 HGTLLNWMSMMPECRSFSLRPGLAMAPNAVPLRSKWYLATG**FMSVMTTVSGLPEQDWS 327
Query: 364 LSHLISKQDPQPRPSLKMGMLPHAPMLLKG 275
L H I Q+P P PSLKMG LPH M KG
Sbjct: 326 LVHRIW*QEPHPLPSLKMGSLPHDVMEEKG 237
Score = 39.1 bits (79), Expect(2) = 3e-052
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = +1 / +2
Query: 541 SASTTPRSPSTLKRGAAPTTWRCWSSTSTATVTLWQW 651
++S R PST RG T CW ST TAT T +W
Sbjct: 506 ASSLVSR*PSTWSRGRTRCTSPCWWSTKTATATWCRW 616
Score = 35.9 bits (72), Expect(2) = 2e-032
Identities = 18/35 (51%), Positives = 20/35 (57%)
Frame = -1 / -1
Query: 662 LLDVHCHNVTVAVDVLDQQRQVVGAAPLFKVEGDL 558
L +VH H V VAV VL Q +V PL VEG L
Sbjct: 627 LHEVHLHQVAVAVLVLHQHGEVHRVRPLLHVEGHL 523
>gb|BQ764220.1|BQ764220 EBan01_SQ005_P04_R anther, yellow stage, no treatment, cv Optic,
EBan01 Hordeum vulgare subsp. vulgare cDNA clone
EBan01_SQ005_P04 5', mRNA sequence
Length = 470
Score = 204 bits (439), Expect = 1e-051
Identities = 80/126 (63%), Positives = 91/126 (72%)
Frame = +3 / +2
Query: 126 GPPKVPPGKNITATYGKDWLDAKATWYGKPTXXXXXXXXXXXXYKDVNKPPFNSMGACGN 305
G KVP G NITA Y +W DAK TWYGKPT YK+V+K PF M +CGN
Sbjct: 89 GIAKVPCGPNITANYVSEWKDAKTTWYGKPTGAGPKDNGGACGYKEVDKAPFFGMTSCGN 268
Query: 306 IPIFKDGLGCGSCFEIKCDKPVECSGKPVVVHITDMNYEPIAAYHFDLAGTAFGAMAKKG 485
+PIFKDG GCGSCFE+KC KP CSG+P +V ITD N EPIAAYHFDL+G AFG MAKKG
Sbjct: 269 VPIFKDGRGCGSCFELKCTKPEACSGEPTIVTITDKNEEPIAAYHFDLSGHAFGTMAKKG 448
Query: 486 EEEKLR 503
+E+KLR
Sbjct: 449 QEQKLR 466
Score = 119 bits (254), Expect(2) = 1e-030
Identities = 52/80 (65%), Positives = 58/80 (72%)
Frame = -2 / -3
Query: 502 RSFSSSPFLAMAPNAVPAKSKWYAAIGS*FMSVMCTTTGLPEHSTGLSHLISKQDPQPRP 323
RSF S PFLAM P A P +SKWYAA+GS F+SVM T G PE ++GL HL SKQ+PQPRP
Sbjct: 465 RSFCSWPFLAMVPKAWPDRSKWYAAMGSSFLSVMVTMVGSPEQASGLVHLSSKQEPQPRP 286
Query: 322 SLKMGMLPHAPMLLKGGLFT 263
SLKMG LP M KG L T
Sbjct: 285 SLKMGTLPQEVMPKKGALST 226
Score = 34.5 bits (69), Expect(2) = 1e-030
Identities = 17/27 (62%), Positives = 17/27 (62%)
Frame = -2 / -3
Query: 205 YHVALASSQSLP*VAVMFLPGGTLGGP 125
YHV LAS SL * AVM P GTL P
Sbjct: 168 YHVVLASFHSLT*FAVMLGPQGTLAMP 88
>gb|BI959698.1|BI959698 HVSMEn0020N13f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0020N13f, mRNA sequence
Length = 630
Score = 191 bits (411), Expect(2) = 2e-051
Identities = 74/129 (57%), Positives = 91/129 (70%)
Frame = +3 / +3
Query: 165 TYGKDWLDAKATWYGKPTXXXXXXXXXXXXYKDVNKPPFNSMGACGNIPIFKDGLGCGSC 344
T +W DA+ATWYG PT +K+ N+ PF+SM +CGN PIFKDG GCGSC
Sbjct: 174 TADPNWEDARATWYGAPTGAGPMDDGGACGFKNTNQYPFSSMTSCGNEPIFKDGKGCGSC 353
Query: 345 FEIKCDKPVECSGKPVVVHITDMNYEPIAAYHFDLAGTAFGAMAKKGEEEKLRKAGIIDM 524
++I+C CSG P V ITDMNY P+A YHFDL+GTAFGAMAK G EKLR +GIID+
Sbjct: 354 YQIRCTNDQSCSGNPETVVITDMNYYPVAKYHFDLSGTAFGAMAKPGLSEKLRHSGIIDI 533
Query: 525 QFRRVKCKY 551
QF+RV C++
Sbjct: 534 QFKRVPCEF 560
Score = 124 bits (265), Expect(2) = 2e-029
Identities = 58/90 (64%), Positives = 61/90 (67%)
Frame = -2 / -3
Query: 544 HLTLRNCMSMMPALRSFSSSPFLAMAPNAVPAKSKWYAAIGS*FMSVMCTTTGLPEHSTG 365
H TL N MSMMP RSFS P LAMAPNAVP +SKWY A G *FMSVM T +GLPE
Sbjct: 553 HGTLLNWMSMMPECRSFSLRPGLAMAPNAVPLRSKWYLATG**FMSVMTTVSGLPEQDWS 374
Query: 364 LSHLISKQDPQPRPSLKMGMLPHAPMLLKG 275
L H I Q+P P PSLKMG LPH M KG
Sbjct: 373 LVHRIW*QEPHPLPSLKMGSLPHDVMEEKG 284
Score = 32.7 bits (65), Expect(2) = 2e-051
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = +3 / +3
Query: 558 KVTFHLEKGCGPNYLALLVK 617
KVTFH+E+G P Y A+LV+
Sbjct: 570 KVTFHVEQGSNPVYFAVLVE 629
Score = 25.4 bits (49), Expect(2) = 2e-029
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -2 / -3
Query: 613 TSSAR*LGPHPFSRWKVTL 557
TS+A+ G P S WKVTL
Sbjct: 625 TSTAKYTGFDPCSTWKVTL 569
>gb|BI959771.1|BI959771 HVSMEn0021G03f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0021G03f, mRNA sequence
Length = 682
Score = 191 bits (411), Expect(2) = 2e-051
Identities = 74/129 (57%), Positives = 91/129 (70%)
Frame = +3 / +3
Query: 165 TYGKDWLDAKATWYGKPTXXXXXXXXXXXXYKDVNKPPFNSMGACGNIPIFKDGLGCGSC 344
T +W DA+ATWYG PT +K+ N+ PF+SM +CGN PIFKDG GCGSC
Sbjct: 156 TADPNWEDARATWYGAPTGAGPMDDGGACGFKNTNQYPFSSMTSCGNEPIFKDGKGCGSC 335
Query: 345 FEIKCDKPVECSGKPVVVHITDMNYEPIAAYHFDLAGTAFGAMAKKGEEEKLRKAGIIDM 524
++I+C CSG P V ITDMNY P+A YHFDL+GTAFGAMAK G EKLR +GIID+
Sbjct: 336 YQIRCTNDQSCSGNPETVVITDMNYYPVAKYHFDLSGTAFGAMAKPGLSEKLRHSGIIDI 515
Query: 525 QFRRVKCKY 551
QF+RV C++
Sbjct: 516 QFKRVPCEF 542
Score = 124 bits (265), Expect(2) = 4e-029
Identities = 58/90 (64%), Positives = 61/90 (67%)
Frame = -2 / -1
Query: 544 HLTLRNCMSMMPALRSFSSSPFLAMAPNAVPAKSKWYAAIGS*FMSVMCTTTGLPEHSTG 365
H TL N MSMMP RSFS P LAMAPNAVP +SKWY A G *FMSVM T +GLPE
Sbjct: 535 HGTLLNWMSMMPECRSFSLRPGLAMAPNAVPLRSKWYLATG**FMSVMTTVSGLPEQDWS 356
Query: 364 LSHLISKQDPQPRPSLKMGMLPHAPMLLKG 275
L H I Q+P P PSLKMG LPH M KG
Sbjct: 355 LVHRIW*QEPHPLPSLKMGSLPHDVMEEKG 266
Score = 32.2 bits (64), Expect(2) = 2e-051
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +3 / +2
Query: 555 SKVTFHLEKGCGPNYLALL 611
SKVTFH+E+G P Y A+L
Sbjct: 548 SKVTFHVEQGSNPVYFAVL 604
Score = 24.4 bits (47), Expect(2) = 4e-029
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -2 / -2
Query: 610 SSAR*LGPHPFSRWKVTLE 554
S+A+ G P S WKVTL+
Sbjct: 603 STAKYTGLDPCSTWKVTLD 547
>gb|CV063939.1|CV063939 BNEL94h5 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL94h5 5' similar to Oryza sativa
beta-expansin, mRNA sequence
Length = 661
Score = 104 bits (222), Expect(3) = 8e-051
Identities = 40/59 (67%), Positives = 49/59 (83%)
Frame = +3 / +2
Query: 375 CSGKPVVVHITDMNYEPIAAYHFDLAGTAFGAMAKKGEEEKLRKAGIIDMQFRRVKCKY 551
CSG P V ITDMNY+P++ YHFDL+GTAFGAMAK G ++LR AGII+MQF+RV C+Y
Sbjct: 320 CSGVPKTVIITDMNYDPVSRYHFDLSGTAFGAMAKYGRNDELRHAGIINMQFKRVPCQY 496
Score = 100 bits (213), Expect(3) = 8e-051
Identities = 35/60 (58%), Positives = 44/60 (73%)
Frame = +3 / +1
Query: 180 WLDAKATWYGKPTXXXXXXXXXXXXYKDVNKPPFNSMGACGNIPIFKDGLGCGSCFEIKC 359
WLDAKATWYG+PT +K+VN PPF+SM +CGN P+FKDG GCGSC++I+C
Sbjct: 118 WLDAKATWYGRPTGAGPDDNGGACGFKNVNLPPFSSMTSCGNQPLFKDGKGCGSCYQIRC 297
Score = 87.2 bits (184), Expect(3) = 1e-024
Identities = 38/60 (63%), Positives = 42/60 (70%)
Frame = -2 / -2
Query: 550 YLHLTLRNCMSMMPALRSFSSSPFLAMAPNAVPAKSKWYAAIGS*FMSVMCTTTGLPEHS 371
Y H TL NCM +MPA RS S P+LAMAP AVP +SKW GS*FMSVM T G PEH+
Sbjct: 495 YWHGTLLNCMLIMPAWRSSSLRPYLAMAPKAVPLRSKW*RETGS*FMSVMITVLGTPEHA 316
Score = 41.4 bits (84), Expect(3) = 1e-024
Identities = 19/32 (59%), Positives = 20/32 (62%)
Frame = -2 / -3
Query: 358 HLISKQDPQPRPSLKMGMLPHAPMLLKGGLFT 263
HLI Q+PQP PSLK G LP M KGG T
Sbjct: 296 HLIW*QEPQPLPSLKSGWLPQEVMEEKGGKLT 201
Score = 35.0 bits (70), Expect(3) = 8e-051
Identities = 12/20 (60%), Positives = 17/20 (85%)
Frame = +3 / +2
Query: 561 VTFHLEKGCGPNYLALLVKY 620
VTFH+E+G P Y+A+LV+Y
Sbjct: 509 VTFHVEEGSNPFYMAILVEY 568
Score = 23.1 bits (44), Expect(3) = 1e-024
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -2 / -3
Query: 205 YHVALASSQ 179
YHVALASSQ
Sbjct: 143 YHVALASSQ 117
>gb|BU981055.1|BU981055 HA22I03r HA Hordeum vulgare subsp. vulgare cDNA clone HA22I03
5-PRIME, mRNA sequence
Length = 597
Score = 104 bits (222), Expect(3) = 8e-051
Identities = 40/59 (67%), Positives = 49/59 (83%)
Frame = +3 / +1
Query: 375 CSGKPVVVHITDMNYEPIAAYHFDLAGTAFGAMAKKGEEEKLRKAGIIDMQFRRVKCKY 551
CSG P V ITDMNY+P++ YHFDL+GTAFGAMAK G ++LR AGII+MQF+RV C+Y
Sbjct: 274 CSGVPKTVIITDMNYDPVSRYHFDLSGTAFGAMAKYGRNDELRHAGIINMQFKRVPCQY 450
Score = 100 bits (213), Expect(3) = 8e-051
Identities = 35/60 (58%), Positives = 44/60 (73%)
Frame = +3 / +1
Query: 180 WLDAKATWYGKPTXXXXXXXXXXXXYKDVNKPPFNSMGACGNIPIFKDGLGCGSCFEIKC 359
WLDAKATWYG+PT +K+VN PPF+SM +CGN P+FKDG GCGSC++I+C
Sbjct: 73 WLDAKATWYGRPTGAGPDDNGGACGFKNVNLPPFSSMTSCGNQPLFKDGKGCGSCYQIRC 252
Score = 86.8 bits (183), Expect(3) = 1e-024
Identities = 38/60 (63%), Positives = 42/60 (70%)
Frame = -2 / -2
Query: 550 YLHLTLRNCMSMMPALRSFSSSPFLAMAPNAVPAKSKWYAAIGS*FMSVMCTTTGLPEHS 371
Y H TL NCM +MPA RS S P+LAMAP AVP +SKW GS*FMSVM T G PEH+
Sbjct: 449 YWHGTLLNCMLIMPAWRSSSLRPYLAMAPKAVPLRSKW*RETGS*FMSVMITVFGTPEHA 270
Score = 41.4 bits (84), Expect(3) = 1e-024
Identities = 19/32 (59%), Positives = 20/32 (62%)
Frame = -2 / -2
Query: 358 HLISKQDPQPRPSLKMGMLPHAPMLLKGGLFT 263
HLI Q+PQP PSLK G LP M KGG T
Sbjct: 251 HLIW*QEPQPLPSLKSGWLPQEVMEEKGGKLT 156
Score = 35.0 bits (70), Expect(3) = 8e-051
Identities = 12/20 (60%), Positives = 17/20 (85%)
Frame = +3 / +1
Query: 561 VTFHLEKGCGPNYLALLVKY 620
VTFH+E+G P Y+A+LV+Y
Sbjct: 463 VTFHVEEGSNPFYMAILVEY 522
Score = 23.1 bits (44), Expect(3) = 1e-024
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -2 / -2
Query: 205 YHVALASSQ 179
YHVALASSQ
Sbjct: 98 YHVALASSQ 72
>gb|BQ458429.1|BQ458429 HA05E07r HA Hordeum vulgare subsp. vulgare cDNA clone HA05E07
5-PRIME, mRNA sequence
Length = 504
Score = 104 bits (222), Expect(3) = 8e-051
Identities = 40/59 (67%), Positives = 49/59 (83%)
Frame = +3 / +2
Query: 375 CSGKPVVVHITDMNYEPIAAYHFDLAGTAFGAMAKKGEEEKLRKAGIIDMQFRRVKCKY 551
CSG P V ITDMNY+P++ YHFDL+GTAFGAMAK G ++LR AGII+MQF+RV C+Y
Sbjct: 212 CSGVPKTVIITDMNYDPVSRYHFDLSGTAFGAMAKYGRNDELRHAGIINMQFKRVPCQY 388
Score = 100 bits (213), Expect(3) = 8e-051
Identities = 35/60 (58%), Positives = 44/60 (73%)
Frame = +3 / +2
Query: 180 WLDAKATWYGKPTXXXXXXXXXXXXYKDVNKPPFNSMGACGNIPIFKDGLGCGSCFEIKC 359
WLDAKATWYG+PT +K+VN PPF+SM +CGN P+FKDG GCGSC++I+C
Sbjct: 11 WLDAKATWYGRPTGAGPDDNGGACGFKNVNLPPFSSMTSCGNQPLFKDGKGCGSCYQIRC 190
Score = 86.8 bits (183), Expect(3) = 1e-024
Identities = 38/60 (63%), Positives = 42/60 (70%)
Frame = -2 / -1
Query: 550 YLHLTLRNCMSMMPALRSFSSSPFLAMAPNAVPAKSKWYAAIGS*FMSVMCTTTGLPEHS 371
Y H TL NCM +MPA RS S P+LAMAP AVP +SKW GS*FMSVM T G PEH+
Sbjct: 387 YWHGTLLNCMLIMPAWRSSSLRPYLAMAPKAVPLRSKW*RETGS*FMSVMITVFGTPEHA 208
Score = 41.4 bits (84), Expect(3) = 1e-024
Identities = 19/32 (59%), Positives = 20/32 (62%)
Frame = -2 / -1
Query: 358 HLISKQDPQPRPSLKMGMLPHAPMLLKGGLFT 263
HLI Q+PQP PSLK G LP M KGG T
Sbjct: 189 HLIW*QEPQPLPSLKSGWLPQEVMEEKGGKLT 94
Score = 35.0 bits (70), Expect(3) = 8e-051
Identities = 12/20 (60%), Positives = 17/20 (85%)
Frame = +3 / +2
Query: 561 VTFHLEKGCGPNYLALLVKY 620
VTFH+E+G P Y+A+LV+Y
Sbjct: 401 VTFHVEEGSNPFYMAILVEY 460
Score = 23.1 bits (44), Expect(3) = 1e-024
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -2 / -1
Query: 205 YHVALASSQ 179
YHVALASSQ
Sbjct: 36 YHVALASSQ 10
>gb|BI960458.1|BI960458 HVSMEn0024K16f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0024K16f, mRNA sequence
Length = 677
Score = 190 bits (410), Expect(2) = 8e-051
Identities = 73/125 (58%), Positives = 90/125 (72%)
Frame = +3 / +2
Query: 177 DWLDAKATWYGKPTXXXXXXXXXXXXYKDVNKPPFNSMGACGNIPIFKDGLGCGSCFEIK 356
+W DA+ATWYG PT +K+ N+ PF+SM +CGN PIFKDG GCGSC++I+
Sbjct: 191 NWEDARATWYGAPTGAGPMDDGGACGFKNTNQYPFSSMTSCGNEPIFKDGKGCGSCYQIR 370
Query: 357 CDKPVECSGKPVVVHITDMNYEPIAAYHFDLAGTAFGAMAKKGEEEKLRKAGIIDMQFRR 536
C CSG P V ITDMNY P+A YHFDL+GTAFGAMAK G EKLR +GIID+QF+R
Sbjct: 371 CTNDQSCSGNPETVVITDMNYYPVAKYHFDLSGTAFGAMAKPGLSEKLRHSGIIDIQFKR 550
Query: 537 VKCKY 551
V C++
Sbjct: 551 VPCEF 565
Score = 124 bits (265), Expect(2) = 3e-031
Identities = 58/90 (64%), Positives = 61/90 (67%)
Frame = -2 / -3
Query: 544 HLTLRNCMSMMPALRSFSSSPFLAMAPNAVPAKSKWYAAIGS*FMSVMCTTTGLPEHSTG 365
H TL N MSMMP RSFS P LAMAPNAVP +SKWY A G *FMSVM T +GLPE
Sbjct: 558 HGTLLNWMSMMPECRSFSLRPGLAMAPNAVPLRSKWYLATG**FMSVMTTVSGLPEQDWS 379
Query: 364 LSHLISKQDPQPRPSLKMGMLPHAPMLLKG 275
L H I Q+P P PSLKMG LPH M KG
Sbjct: 378 LVHRIW*QEPHPLPSLKMGSLPHDVMEEKG 289
Score = 31.8 bits (63), Expect(2) = 3e-031
Identities = 16/33 (48%), Positives = 18/33 (54%)
Frame = -1 / -2
Query: 656 DVHCHNVTVAVDVLDQQRQVVGAAPLFKVEGDL 558
+VH H V VAV VL Q +V PL V G L
Sbjct: 673 EVHLHXVPVAVLVLHQHGEVHRVRPLLHVXGHL 575
Score = 30.9 bits (61), Expect(2) = 8e-051
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +3 / +2
Query: 558 KVTFHLEKGCGPNYLALLVKY 620
KVT H+E+G P Y +LV+Y
Sbjct: 575 KVTXHVEQGSNPVYFXVLVEY 637
>gb|BG369408.2|BG369408 HVSMEi0024E17f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0024E17f, mRNA sequence
Length = 875
Score = 191 bits (411), Expect(2) = 1e-050
Identities = 74/129 (57%), Positives = 91/129 (70%)
Frame = +3 / +3
Query: 165 TYGKDWLDAKATWYGKPTXXXXXXXXXXXXYKDVNKPPFNSMGACGNIPIFKDGLGCGSC 344
T +W DA+ATWYG PT +K+ N+ PF+SM +CGN PIFKDG GCGSC
Sbjct: 165 TADPNWEDARATWYGAPTGAGPMDDGGACGFKNTNQYPFSSMTSCGNEPIFKDGKGCGSC 344
Query: 345 FEIKCDKPVECSGKPVVVHITDMNYEPIAAYHFDLAGTAFGAMAKKGEEEKLRKAGIIDM 524
++I+C CSG P V ITDMNY P+A YHFDL+GTAFGAMAK G EKLR +GIID+
Sbjct: 345 YQIRCTNDQSCSGNPETVVITDMNYYPVAKYHFDLSGTAFGAMAKPGLSEKLRHSGIIDI 524
Query: 525 QFRRVKCKY 551
QF+RV C++
Sbjct: 525 QFKRVPCEF 551
Score = 124 bits (265), Expect(2) = 1e-030
Identities = 58/90 (64%), Positives = 61/90 (67%)
Frame = -2 / -2
Query: 544 HLTLRNCMSMMPALRSFSSSPFLAMAPNAVPAKSKWYAAIGS*FMSVMCTTTGLPEHSTG 365
H TL N MSMMP RSFS P LAMAPNAVP +SKWY A G *FMSVM T +GLPE
Sbjct: 544 HGTLLNWMSMMPECRSFSLRPGLAMAPNAVPLRSKWYLATG**FMSVMTTVSGLPEQDWS 365
Query: 364 LSHLISKQDPQPRPSLKMGMLPHAPMLLKG 275
L H I Q+P P PSLKMG LPH M KG
Sbjct: 364 LVHRIW*QEPHPLPSLKMGSLPHDVMEEKG 275
Score = 29.9 bits (59), Expect(2) = 1e-050
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +1 / +3
Query: 571 TLKRGAAPTTWRCWSSTSTATVTLWQW 651
T RG T CW ST TAT T W
Sbjct: 573 TWSRGTTRCTSPCWWSTRTATGTWCMW 653
Score = 29.9 bits (59), Expect(2) = 1e-030
Identities = 15/32 (46%), Positives = 17/32 (53%)
Frame = -1 / -2
Query: 653 VHCHNVTVAVDVLDQQRQVVGAAPLFKVEGDL 558
VH H V VAV VL Q +V PL V+ L
Sbjct: 655 VHMHQVPVAVLVLHQHGEVHRVVPLLHVQXHL 560
>gb|BI959654.1|BI959654 HVSMEn0020K03f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0020K03f, mRNA sequence
Length = 679
Score = 187 bits (402), Expect(2) = 4e-049
Identities = 72/124 (58%), Positives = 88/124 (70%)
Frame = +3 / +2
Query: 180 WLDAKATWYGKPTXXXXXXXXXXXXYKDVNKPPFNSMGACGNIPIFKDGLGCGSCFEIKC 359
W DA+ATWYG PT +K+ N+ PF+SM +CGN PIFKDG GCGSC++I+C
Sbjct: 188 WEDARATWYGAPTGAGPMDDGGACGFKNTNQYPFSSMTSCGNEPIFKDGKGCGSCYQIRC 367
Query: 360 DKPVECSGKPVVVHITDMNYEPIAAYHFDLAGTAFGAMAKKGEEEKLRKAGIIDMQFRRV 539
CSG P V ITDMNY P+A YHFDL+GTAFGAMAK G EKL +GIID+QF+RV
Sbjct: 368 TNDQSCSGNPETVVITDMNYYPVAKYHFDLSGTAFGAMAKPGLSEKLPHSGIIDIQFKRV 547
Query: 540 KCKY 551
C++
Sbjct: 548 PCEF 559
Score = 121 bits (258), Expect = 1e-026
Identities = 57/90 (63%), Positives = 60/90 (66%)
Frame = -2 / -2
Query: 544 HLTLRNCMSMMPALRSFSSSPFLAMAPNAVPAKSKWYAAIGS*FMSVMCTTTGLPEHSTG 365
H TL N MSMMP SFS P LAMAPNAVP +SKWY A G *FMSVM T +GLPE
Sbjct: 552 HGTLLNWMSMMPECGSFSLRPGLAMAPNAVPLRSKWYLATG**FMSVMTTVSGLPEQDWS 373
Query: 364 LSHLISKQDPQPRPSLKMGMLPHAPMLLKG 275
L H I Q+P P PSLKMG LPH M KG
Sbjct: 372 LVHRIW*QEPHPLPSLKMGSLPHDVMEEKG 283
Score = 29.0 bits (57), Expect(2) = 4e-049
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +3 / +2
Query: 558 KVTFHLEKGCGPNYLALLVKY 620
KVTFH+E+G P Y LV +
Sbjct: 569 KVTFHVEQGSNPVYFPRLVGF 631
>gb|CV060611.1|CV060611 BNEL5B4 Barley EST endosperm library Hordeum vulgare subsp. vulgare
cDNA clone BNEL5B4 5' similar to Oryza sativa
beta-expansin, mRNA sequence
Length = 634
Score = 104 bits (222), Expect(3) = 6e-049
Identities = 40/59 (67%), Positives = 49/59 (83%)
Frame = +3 / +3
Query: 375 CSGKPVVVHITDMNYEPIAAYHFDLAGTAFGAMAKKGEEEKLRKAGIIDMQFRRVKCKY 551
CSG P V ITDMNY+P++ YHFDL+GTAFGAMAK G ++LR AGII+MQF+RV C+Y
Sbjct: 321 CSGVPKTVIITDMNYDPVSRYHFDLSGTAFGAMAKYGRNDELRHAGIINMQFKRVPCQY 497
Score = 100 bits (213), Expect(3) = 6e-049
Identities = 35/60 (58%), Positives = 44/60 (73%)
Frame = +3 / +3
Query: 180 WLDAKATWYGKPTXXXXXXXXXXXXYKDVNKPPFNSMGACGNIPIFKDGLGCGSCFEIKC 359
WLDAKATWYG+PT +K+VN PPF+SM +CGN P+FKDG GCGSC++I+C
Sbjct: 120 WLDAKATWYGRPTGAGPDDNGGACGFKNVNLPPFSSMTSCGNQPLFKDGKGCGSCYQIRC 299
Score = 87.2 bits (184), Expect(3) = 1e-024
Identities = 38/60 (63%), Positives = 42/60 (70%)
Frame = -2 / -1
Query: 550 YLHLTLRNCMSMMPALRSFSSSPFLAMAPNAVPAKSKWYAAIGS*FMSVMCTTTGLPEHS 371
Y H TL NCM +MPA RS S P+LAMAP AVP +SKW GS*FMSVM T G PEH+
Sbjct: 496 YWHGTLLNCMLIMPAWRSSSLRPYLAMAPKAVPLRSKW*RETGS*FMSVMITVLGTPEHA 317
Score = 41.4 bits (84), Expect(3) = 1e-024
Identities = 19/32 (59%), Positives = 20/32 (62%)
Frame = -2 / -1
Query: 358 HLISKQDPQPRPSLKMGMLPHAPMLLKGGLFT 263
HLI Q+PQP PSLK G LP M KGG T
Sbjct: 298 HLIW*QEPQPLPSLKSGWLPQEVMEEKGGKLT 203
Score = 28.6 bits (56), Expect(3) = 6e-049
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +3 / +3
Query: 561 VTFHLEKGCGPNYLALLVKY 620
VTFH+E+ P Y+A+L +Y
Sbjct: 510 VTFHVEEXSNPFYMAILGEY 569
Score = 23.1 bits (44), Expect(3) = 1e-024
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -2 / -1
Query: 205 YHVALASSQ 179
YHVALASSQ
Sbjct: 145 YHVALASSQ 119
>gb|BI959720.1|BI959720 HVSMEn0020P05f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0020P05f, mRNA sequence
Length = 615
Score = 188 bits (405), Expect(2) = 2e-048
Identities = 72/125 (57%), Positives = 89/125 (71%)
Frame = +3 / +3
Query: 177 DWLDAKATWYGKPTXXXXXXXXXXXXYKDVNKPPFNSMGACGNIPIFKDGLGCGSCFEIK 356
+W DA+ATWYG PT + + N+ PF+SM +CGN PIFKDG GCGSC++I+
Sbjct: 180 NWEDARATWYGAPTGAGPMDDGGACGFNNTNQYPFSSMTSCGNEPIFKDGKGCGSCYQIR 359
Query: 357 CDKPVECSGKPVVVHITDMNYEPIAAYHFDLAGTAFGAMAKKGEEEKLRKAGIIDMQFRR 536
C CSG P V ITDMNY P+A YHFDL+GTAFGAMAK G EKLR +GIID+QF+R
Sbjct: 360 CTNDQSCSGNPETVVITDMNYYPVAKYHFDLSGTAFGAMAKPGLSEKLRHSGIIDIQFKR 539
Query: 537 VKCKY 551
V C++
Sbjct: 540 VPCEF 554
Score = 124 bits (265), Expect = 1e-027
Identities = 58/90 (64%), Positives = 61/90 (67%)
Frame = -2 / -3
Query: 544 HLTLRNCMSMMPALRSFSSSPFLAMAPNAVPAKSKWYAAIGS*FMSVMCTTTGLPEHSTG 365
H TL N MSMMP RSFS P LAMAPNAVP +SKWY A G *FMSVM T +GLPE
Sbjct: 547 HGTLLNWMSMMPECRSFSLRPGLAMAPNAVPLRSKWYLATG**FMSVMTTVSGLPEQDWS 368
Query: 364 LSHLISKQDPQPRPSLKMGMLPHAPMLLKG 275
L H I Q+P P PSLKMG LPH M KG
Sbjct: 367 LVHRIW*QEPHPLPSLKMGSLPHDVMEEKG 278
Score = 25.4 bits (49), Expect(2) = 2e-048
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +3 / +3
Query: 561 VTFHLEKGCGPNYLAL 608
VTFH+E G P Y A+
Sbjct: 567 VTFHVEXGSNPVYFAV 614
>gb|BG365461.2|BG365461 HVSMEi0002M09f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0002M09f, mRNA sequence
Length = 754
Score = 191 bits (411), Expect(2) = 2e-048
Identities = 74/129 (57%), Positives = 91/129 (70%)
Frame = +3 / +3
Query: 165 TYGKDWLDAKATWYGKPTXXXXXXXXXXXXYKDVNKPPFNSMGACGNIPIFKDGLGCGSC 344
T +W DA+ATWYG PT +K+ N+ PF+SM +CGN PIFKDG GCGSC
Sbjct: 177 TADPNWEDARATWYGAPTGAGPMDDGGACGFKNTNQYPFSSMTSCGNEPIFKDGKGCGSC 356
Query: 345 FEIKCDKPVECSGKPVVVHITDMNYEPIAAYHFDLAGTAFGAMAKKGEEEKLRKAGIIDM 524
++I+C CSG P V ITDMNY P+A YHFDL+GTAFGAMAK G EKLR +GIID+
Sbjct: 357 YQIRCTNDQSCSGNPETVVITDMNYYPVAKYHFDLSGTAFGAMAKPGLSEKLRHSGIIDI 536
Query: 525 QFRRVKCKY 551
QF+RV C++
Sbjct: 537 QFKRVPCEF 563
Score = 124 bits (265), Expect = 1e-027
Identities = 58/90 (64%), Positives = 61/90 (67%)
Frame = -2 / -1
Query: 544 HLTLRNCMSMMPALRSFSSSPFLAMAPNAVPAKSKWYAAIGS*FMSVMCTTTGLPEHSTG 365
H TL N MSMMP RSFS P LAMAPNAVP +SKWY A G *FMSVM T +GLPE
Sbjct: 556 HGTLLNWMSMMPECRSFSLRPGLAMAPNAVPLRSKWYLATG**FMSVMTTVSGLPEQDWS 377
Query: 364 LSHLISKQDPQPRPSLKMGMLPHAPMLLKG 275
L H I Q+P P PSLKMG LPH M KG
Sbjct: 376 LVHRIW*QEPHPLPSLKMGSLPHDVMEEKG 287
Score = 22.1 bits (42), Expect(2) = 2e-048
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = +1 / +1
Query: 544 ASTTPRSPSTLKRGAAPTTWRCWSSTSTATVTLWQW 651
AS+ S +++G+ P + + TAT T QW
Sbjct: 556 ASSLGSSDLPVEQGSNPVYFTRLVDSMTATATWCQW 663
>gb|CA022206.1|CA022206 HZ42H09r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ42H09
5-PRIME, mRNA sequence
Length = 567
Score = 191 bits (411), Expect = 8e-048
Identities = 74/129 (57%), Positives = 91/129 (70%)
Frame = +3 / +3
Query: 165 TYGKDWLDAKATWYGKPTXXXXXXXXXXXXYKDVNKPPFNSMGACGNIPIFKDGLGCGSC 344
T +W DA+ATWYG PT +K+ N+ PF+SM +CGN PIFKDG GCGSC
Sbjct: 174 TADPNWEDARATWYGAPTGAGPMDDGGACGFKNTNQYPFSSMTSCGNEPIFKDGKGCGSC 353
Query: 345 FEIKCDKPVECSGKPVVVHITDMNYEPIAAYHFDLAGTAFGAMAKKGEEEKLRKAGIIDM 524
++I+C CSG P V ITDMNY P+A YHFDL+GTAFGAMAK G EKLR +GIID+
Sbjct: 354 YQIRCTNDQSCSGNPETVVITDMNYYPVAKYHFDLSGTAFGAMAKPGLSEKLRHSGIIDI 533
Query: 525 QFRRVKCKY 551
QF+RV C++
Sbjct: 534 QFKRVPCEF 560
Score = 124 bits (265), Expect = 1e-027
Identities = 58/90 (64%), Positives = 61/90 (67%)
Frame = -2 / -3
Query: 544 HLTLRNCMSMMPALRSFSSSPFLAMAPNAVPAKSKWYAAIGS*FMSVMCTTTGLPEHSTG 365
H TL N MSMMP RSFS P LAMAPNAVP +SKWY A G *FMSVM T +GLPE
Sbjct: 553 HGTLLNWMSMMPECRSFSLRPGLAMAPNAVPLRSKWYLATG**FMSVMTTVSGLPEQDWS 374
Query: 364 LSHLISKQDPQPRPSLKMGMLPHAPMLLKG 275
L H I Q+P P PSLKMG LPH M KG
Sbjct: 373 LVHRIW*QEPHPLPSLKMGSLPHDVMEEKG 284
>gb|CA022237.1|CA022237 HZ42I19r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ42I19
5-PRIME, mRNA sequence
Length = 539
Score = 189 bits (408), Expect = 2e-047
Identities = 77/155 (49%), Positives = 97/155 (62%)
Frame = +3 / +1
Query: 87 AVALVFLVSGAWCGPPKVPPGKNITATYGKDWLDAKATWYGKPTXXXXXXXXXXXXYKDV 266
AVAL +++ A+ +Y WL A+ATWYG P +K V
Sbjct: 67 AVALAAVLAAAYVSSAAAVNLNTSAVSYSSAWLPARATWYGAPNGAGPDDNGGACGFKHV 246
Query: 267 NKPPFNSMGACGNIPIFKDGLGCGSCFEIKCDKPVECSGKPVVVHITDMNYEPIAAYHFD 446
N+ PF+SM +CGN P+FKDG GCGSC++I+C CSG V ITDMNY P+A YHFD
Sbjct: 247 NQYPFSSMTSCGNQPLFKDGKGCGSCYQIRCSGDRSCSGNIETVMITDMNYYPVAQYHFD 426
Query: 447 LAGTAFGAMAKKGEEEKLRKAGIIDMQFRRVKCKY 551
L+GTAFGA+AK G EKLR +GIID+QFRRV C +
Sbjct: 427 LSGTAFGALAKSGLNEKLRHSGIIDIQFRRVPCNF 531
Score = 107 bits (228), Expect = 1e-022
Identities = 54/95 (56%), Positives = 58/95 (61%)
Frame = -2 / -1
Query: 547 LHLTLRNCMSMMPALRSFSSSPFLAMAPNAVPAKSKWYAAIGS*FMSVMCTTTGLPEHST 368
LH TL N MSMMP RSFS P LA AP AVP +SKWY A G *FMSV+ T + LPE
Sbjct: 527 LHGTLLNWMSMMPEWRSFSLRPDLARAPKAVPLRSKWYWATG**FMSVIITVSMLPEQER 348
Query: 367 GLSHLISKQDPQPRPSLKMGMLPHAPMLLKGGLFT 263
H I Q+PQP PSL G LP M KG FT
Sbjct: 347 SPLHRIW*QEPQPLPSLNRGWLPQEVMEEKGYWFT 243
>gb|CA023986.1|CA023986 HZ48A15r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ48A15
5-PRIME, mRNA sequence
Length = 584
Score = 189 bits (408), Expect = 2e-047
Identities = 77/155 (49%), Positives = 97/155 (62%)
Frame = +3 / +2
Query: 87 AVALVFLVSGAWCGPPKVPPGKNITATYGKDWLDAKATWYGKPTXXXXXXXXXXXXYKDV 266
AVAL +++ A+ +Y WL A+ATWYG P +K V
Sbjct: 116 AVALAAVLAAAYVSSAAAVNLNTSAVSYSSAWLPARATWYGAPNGAGPDDNGGACGFKHV 295
Query: 267 NKPPFNSMGACGNIPIFKDGLGCGSCFEIKCDKPVECSGKPVVVHITDMNYEPIAAYHFD 446
N+ PF+SM +CGN P+FKDG GCGSC++I+C CSG V ITDMNY P+A YHFD
Sbjct: 296 NQYPFSSMTSCGNQPLFKDGKGCGSCYQIRCSGDRSCSGNIETVMITDMNYYPVAQYHFD 475
Query: 447 LAGTAFGAMAKKGEEEKLRKAGIIDMQFRRVKCKY 551
L+GTAFGA+AK G EKLR +GIID+QFRRV C +
Sbjct: 476 LSGTAFGALAKSGLNEKLRHSGIIDIQFRRVPCNF 580
Score = 107 bits (228), Expect = 1e-022
Identities = 54/95 (56%), Positives = 58/95 (61%)
Frame = -2 / -3
Query: 547 LHLTLRNCMSMMPALRSFSSSPFLAMAPNAVPAKSKWYAAIGS*FMSVMCTTTGLPEHST 368
LH TL N MSMMP RSFS P LA AP AVP +SKWY A G *FMSV+ T + LPE
Sbjct: 576 LHGTLLNWMSMMPEWRSFSLRPDLARAPKAVPLRSKWYWATG**FMSVIITVSMLPEQER 397
Query: 367 GLSHLISKQDPQPRPSLKMGMLPHAPMLLKGGLFT 263
H I Q+PQP PSL G LP M KG FT
Sbjct: 396 SPLHRIW*QEPQPLPSLNRGWLPQEVMEEKGYWFT 292
>gb|CV063456.1|CV063456 BNEL8E2 Barley EST endosperm library Hordeum vulgare subsp. vulgare
cDNA clone BNEL8E2 5' similar to Oryza sativa
beta-expansin, mRNA sequence
Length = 546
Score = 104 bits (222), Expect(3) = 5e-047
Identities = 40/59 (67%), Positives = 49/59 (83%)
Frame = +3 / +1
Query: 375 CSGKPVVVHITDMNYEPIAAYHFDLAGTAFGAMAKKGEEEKLRKAGIIDMQFRRVKCKY 551
CSG P V ITDMNY+P++ YHFDL+GTAFGAMAK G ++LR AGII+MQF+RV C+Y
Sbjct: 319 CSGVPKTVIITDMNYDPVSRYHFDLSGTAFGAMAKYGRNDELRHAGIINMQFKRVPCQY 495
Score = 100 bits (213), Expect(3) = 5e-047
Identities = 35/60 (58%), Positives = 44/60 (73%)
Frame = +3 / +1
Query: 180 WLDAKATWYGKPTXXXXXXXXXXXXYKDVNKPPFNSMGACGNIPIFKDGLGCGSCFEIKC 359
WLDAKATWYG+PT +K+VN PPF+SM +CGN P+FKDG GCGSC++I+C
Sbjct: 118 WLDAKATWYGRPTGAGPDDNGGACGFKNVNLPPFSSMTSCGNQPLFKDGKGCGSCYQIRC 297
Score = 87.2 bits (184), Expect(3) = 1e-024
Identities = 38/60 (63%), Positives = 42/60 (70%)
Frame = -2 / -2
Query: 550 YLHLTLRNCMSMMPALRSFSSSPFLAMAPNAVPAKSKWYAAIGS*FMSVMCTTTGLPEHS 371
Y H TL NCM +MPA RS S P+LAMAP AVP +SKW GS*FMSVM T G PEH+
Sbjct: 494 YWHGTLLNCMLIMPAWRSSSLRPYLAMAPKAVPLRSKW*RETGS*FMSVMITVLGTPEHA 315
Score = 41.4 bits (84), Expect(3) = 1e-024
Identities = 19/32 (59%), Positives = 20/32 (62%)
Frame = -2 / -2
Query: 358 HLISKQDPQPRPSLKMGMLPHAPMLLKGGLFT 263
HLI Q+PQP PSLK G LP M KGG T
Sbjct: 296 HLIW*QEPQPLPSLKSGWLPQEVMEEKGGKLT 201
Score = 23.1 bits (44), Expect(3) = 1e-024
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -2 / -2
Query: 205 YHVALASSQ 179
YHVALASSQ
Sbjct: 143 YHVALASSQ 117
Score = 22.1 bits (42), Expect(3) = 5e-047
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = +3 / +1
Query: 561 VTFHLEKGCGP 593
VTFH+E+G P
Sbjct: 508 VTFHVEEGSNP 540
>gb|CA019997.1|CA019997 HV14A15r HV Hordeum vulgare subsp. vulgare cDNA clone HV14A15
5-PRIME, mRNA sequence
Length = 616
Score = 173 bits (372), Expect(2) = 5e-047
Identities = 66/121 (54%), Positives = 85/121 (70%)
Frame = +3 / +1
Query: 189 AKATWYGKPTXXXXXXXXXXXXYKDVNKPPFNSMGACGNIPIFKDGLGCGSCFEIKCDKP 368
A+ATWYG P +K+VN+ PF +M +CGN P+FKDG GCG+C++IKC K
Sbjct: 76 ARATWYGAPNGAGPYDNGGACGFKNVNRYPFMAMTSCGNQPLFKDGKGCGACYKIKCTKH 255
Query: 369 VECSGKPVVVHITDMNYEPIAAYHFDLAGTAFGAMAKKGEEEKLRKAGIIDMQFRRVKCK 548
CSG+ V ITDMNY P+A YHFDL+GTAFG +AK G ++LR AGIID+QF RV C+
Sbjct: 256 KACSGRQETVMITDMNYYPVAPYHFDLSGTAFGKLAKPGRNDELRHAGIIDIQFTRVACE 435
Query: 549 Y 551
+
Sbjct: 436 F 438
Score = 100 bits (214), Expect(2) = 3e-024
Identities = 50/94 (53%), Positives = 55/94 (58%)
Frame = -2 / -3
Query: 544 HLTLRNCMSMMPALRSFSSSPFLAMAPNAVPAKSKWYAAIGS*FMSVMCTTTGLPEHSTG 365
H TL N MSMMPA RS S P LA P AVP +SKW A G *FMSV+ T + PEH+
Sbjct: 431 HATLVNWMSMMPACRSSSLRPGLASLPKAVPLRSKW*GATG**FMSVIITVSCRPEHALC 252
Query: 364 LSHLISKQDPQPRPSLKMGMLPHAPMLLKGGLFT 263
HLI PQP PSL G LP M + G FT
Sbjct: 251 FVHLIL*HAPQPLPSLNSGWLPQEVMAMNGYRFT 150
Score = 35.4 bits (71), Expect(2) = 5e-047
Identities = 14/24 (58%), Positives = 15/24 (62%)
Frame = +1 / +2
Query: 568 STLKRGAAPTTWRCWSSTSTATVT 639
ST +RG TWR W ST TAT T
Sbjct: 458 STWRRGPTRCTWRSWWSTRTATAT 529
Score = 31.3 bits (62), Expect(2) = 3e-024
Identities = 17/35 (48%), Positives = 19/35 (54%)
Frame = -1 / -2
Query: 662 LLDVHCHNVTVAVDVLDQQRQVVGAAPLFKVEGDL 558
L +V H+V VAV VL Q R V PL VE L
Sbjct: 552 LHEVDLHHVAVAVLVLHQDRHVHRVGPLLHVEPHL 448
>gb|AV923254.1|AV923254 AV923254 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd12g18 5', mRNA sequence
Length = 616
Score = 187 bits (403), Expect = 1e-046
Identities = 76/155 (49%), Positives = 97/155 (62%)
Frame = +3 / +1
Query: 87 AVALVFLVSGAWCGPPKVPPGKNITATYGKDWLDAKATWYGKPTXXXXXXXXXXXXYKDV 266
AVAL +++ A+ +Y WL A+ATWYG P +K V
Sbjct: 118 AVALAAVLAAAYVSSAAAVNLNTSAVSYSSAWLPARATWYGAPNGAGPDDNGGACGFKHV 297
Query: 267 NKPPFNSMGACGNIPIFKDGLGCGSCFEIKCDKPVECSGKPVVVHITDMNYEPIAAYHFD 446
N+ PF+SM +CG+ P+FKDG GCGSC++I+C CSG V ITDMNY P+A YHFD
Sbjct: 298 NQYPFSSMTSCGSQPLFKDGKGCGSCYQIRCSGDRSCSGNIETVMITDMNYYPVAQYHFD 477
Query: 447 LAGTAFGAMAKKGEEEKLRKAGIIDMQFRRVKCKY 551
L+GTAFGA+AK G EKLR +GIID+QFRRV C +
Sbjct: 478 LSGTAFGALAKSGLNEKLRHSGIIDIQFRRVPCNF 582
Score = 107 bits (228), Expect = 1e-022
Identities = 54/95 (56%), Positives = 58/95 (61%)
Frame = -2 / -3
Query: 547 LHLTLRNCMSMMPALRSFSSSPFLAMAPNAVPAKSKWYAAIGS*FMSVMCTTTGLPEHST 368
LH TL N MSMMP RSFS P LA AP AVP +SKWY A G *FMSV+ T + LPE
Sbjct: 578 LHGTLLNWMSMMPEWRSFSLRPDLARAPKAVPLRSKWYWATG**FMSVIITVSMLPEQER 399
Query: 367 GLSHLISKQDPQPRPSLKMGMLPHAPMLLKGGLFT 263
H I Q+PQP PSL G LP M KG FT
Sbjct: 398 SPLHRIW*QEPQPLPSLNRGWLPQEVMEEKGYWFT 294
>gb|BQ767787.1|BQ767787 EBro08_SQ009_H22_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ009_H22 5', mRNA sequence
Length = 631
Score = 184 bits (396), Expect(2) = 2e-046
Identities = 71/129 (55%), Positives = 88/129 (68%)
Frame = +3 / +3
Query: 165 TYGKDWLDAKATWYGKPTXXXXXXXXXXXXYKDVNKPPFNSMGACGNIPIFKDGLGCGSC 344
+Y WL A+ATWYG P +K VN+ PF+SM +CGN P+FKDG GCGSC
Sbjct: 180 SYSSAWLPARATWYGAPNGAGPDDNGGACGFKHVNQYPFSSMTSCGNQPLFKDGKGCGSC 359
Query: 345 FEIKCDKPVECSGKPVVVHITDMNYEPIAAYHFDLAGTAFGAMAKKGEEEKLRKAGIIDM 524
++I+C CSG V ITDMNY P+A YHFDL+GTAFGA+AK G EKLR +GIID+
Sbjct: 360 YQIRCSGDRSCSGNIETVMITDMNYYPVAQYHFDLSGTAFGALAKSGLNEKLRHSGIIDI 539
Query: 525 QFRRVKCKY 551
QF+RV C +
Sbjct: 540 QFKRVPCNF 566
Score = 107 bits (228), Expect = 1e-022
Identities = 54/95 (56%), Positives = 58/95 (61%)
Frame = -2 / -1
Query: 547 LHLTLRNCMSMMPALRSFSSSPFLAMAPNAVPAKSKWYAAIGS*FMSVMCTTTGLPEHST 368
LH TL N MSMMP RSFS P LA AP AVP +SKWY A G *FMSV+ T + LPE
Sbjct: 562 LHGTLLNWMSMMPEWRSFSLRPDLARAPKAVPLRSKWYWATG**FMSVIITVSMLPEQER 383
Query: 367 GLSHLISKQDPQPRPSLKMGMLPHAPMLLKGGLFT 263
H I Q+PQP PSL G LP M KG FT
Sbjct: 382 SPLHRIW*QEPQPLPSLNRGWLPQEVMEEKGYWFT 278
Score = 22.6 bits (43), Expect(2) = 2e-046
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +3 / +3
Query: 558 KVTFHLEKGCGPNYLALL 611
K+ FH+ +G YLA+L
Sbjct: 576 KINFHVVEGSNAVYLAVL 629
>gb|BI959378.1|BI959378 HVSMEn0019H04f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0019H04f, mRNA sequence
Length = 663
Score = 186 bits (400), Expect = 3e-046
Identities = 73/128 (57%), Positives = 89/128 (69%)
Frame = +3 / +3
Query: 165 TYGKDWLDAKATWYGKPTXXXXXXXXXXXXYKDVNKPPFNSMGACGNIPIFKDGLGCGSC 344
T +W DA+ATWYG PT +K+ N+ PF+SM +CGN PIFKDG GCGSC
Sbjct: 177 TADPNWEDARATWYGAPTGAGPMDDGGACGFKNTNQYPFSSMTSCGNEPIFKDGKGCGSC 356
Query: 345 FEIKCDKPVECSGKPVVVHITDMNYEPIAAYHFDLAGTAFGAMAKKGEEEKLRKAGIIDM 524
++I+C CSG P V ITDMNY P+A YHFDL+GTAFGAMAK G EKLR + IID+
Sbjct: 357 YQIRCTNDQSCSGNPETVVITDMNYYPVAKYHFDLSGTAFGAMAKPGLSEKLRHSRIIDI 536
Query: 525 QFRRVKCK 548
QF+RV C+
Sbjct: 537 QFKRVPCE 560
Score = 122 bits (261), Expect = 4e-027
Identities = 58/90 (64%), Positives = 61/90 (67%)
Frame = -2 / -3
Query: 544 HLTLRNCMSMMPALRSFSSSPFLAMAPNAVPAKSKWYAAIGS*FMSVMCTTTGLPEHSTG 365
H TL N MSMM RSFS SP LAMAPNAVP +SKWY A G *FMSVM T +GLPE
Sbjct: 556 HGTLLNWMSMMRECRSFSLSPGLAMAPNAVPLRSKWYLATG**FMSVMTTVSGLPEQDWS 377
Query: 364 LSHLISKQDPQPRPSLKMGMLPHAPMLLKG 275
L H I Q+P P PSLKMG LPH M KG
Sbjct: 376 LVHRIW*QEPHPLPSLKMGSLPHDVMEEKG 287
>gb|BQ753618.1|BQ753618 EBan01_SQ004_M07_R anther, yellow stage, no treatment, cv Optic,
EBan01 Hordeum vulgare subsp. vulgare cDNA clone
EBan01_SQ004_M07 5', mRNA sequence
Length = 448
Score = 185 bits (399), Expect = 4e-046
Identities = 73/118 (61%), Positives = 82/118 (69%)
Frame = +3 / +2
Query: 126 GPPKVPPGKNITATYGKDWLDAKATWYGKPTXXXXXXXXXXXXYKDVNKPPFNSMGACGN 305
G KVP G NITA Y +W DAK TWYGKPT YK+V+K PF M +CGN
Sbjct: 95 GIAKVPCGPNITANYVSEWKDAKTTWYGKPTGAGPKDNGGACGYKEVDKAPFFGMTSCGN 274
Query: 306 IPIFKDGLGCGSCFEIKCDKPVECSGKPVVVHITDMNYEPIAAYHFDLAGTAFGAMAK 479
+PIFKD GCGSCFE+KC KP CSG+P +V ITD N EPIAAYHFDL+G AFG MAK
Sbjct: 275 VPIFKDSRGCGSCFELKCTKPEACSGEPTIVTITDKNEEPIAAYHFDLSGHAFGTMAK 448
Score = 101 bits (216), Expect(2) = 2e-025
Identities = 45/72 (62%), Positives = 51/72 (70%)
Frame = -2 / -2
Query: 478 LAMAPNAVPAKSKWYAAIGS*FMSVMCTTTGLPEHSTGLSHLISKQDPQPRPSLKMGMLP 299
LAM P A P +SKWYAA+GS F+SVM T G PE ++GL HL SKQ+PQPR SLKMG LP
Sbjct: 447 LAMVPKAWPDRSKWYAAMGSSFLSVMVTMVGSPEQASGLVHLSSKQEPQPRLSLKMGTLP 268
Query: 298 HAPMLLKGGLFT 263
M KG L T
Sbjct: 267 QEVMPKKGALST 232
Score = 34.5 bits (69), Expect(2) = 2e-025
Identities = 17/27 (62%), Positives = 17/27 (62%)
Frame = -2 / -2
Query: 205 YHVALASSQSLP*VAVMFLPGGTLGGP 125
YHV LAS SL * AVM P GTL P
Sbjct: 174 YHVVLASFHSLT*FAVMLGPQGTLAMP 94
>gb|CB881182.1|CB881182 HM09A07w HM Hordeum vulgare subsp. vulgare cDNA clone HM09A07
3-PRIME, mRNA sequence
Length = 680
Score = 124 bits (265), Expect(2) = 5e-046
Identities = 51/97 (52%), Positives = 63/97 (64%)
Frame = +3 / -3
Query: 555 SKVTFHLEKGCGPNYLALLVKYXXXXXXXXXXXXKEKGSDTYEPLKHSWGAIWRKDSDKP 734
+KV FH+EKG PNYLAL+VK+ K KG D + LK SWGA+WR D+
Sbjct: 543 TKVNFHVEKGSSPNYLALVVKFLQGDGDVVAVDIKPKGKDKWIELKESWGAVWRIDTPDK 364
Query: 735 LKGPLTVRLTTEGGTKSVYDDVIPANWKANTAYTAK* 845
L GP +VR TTEGGTK+V +DVIP WK +T+Y K*
Sbjct: 363 LIGPFSVRYTTEGGTKTVAEDVIPEGWKPDTSYETK* 253
Score = 81.3 bits (171), Expect(2) = 5e-046
Identities = 31/42 (73%), Positives = 38/42 (90%)
Frame = +3 / -3
Query: 426 IAAYHFDLAGTAFGAMAKKGEEEKLRKAGIIDMQFRRVKCKY 551
IAAYHFDL+G AFG MAKKG+E+KLR AG ++++FRRVKCKY
Sbjct: 678 IAAYHFDLSGHAFGTMAKKGQEQKLRDAGEVEIKFRRVKCKY 553
>gb|BM442635.2|BM442635 EBan01_SQ003_L19_R anther, yellow stage, no treatment, cv Optic,
EBan01 Hordeum vulgare subsp. vulgare cDNA clone
EBan01_SQ003_L19 5', mRNA sequence
Length = 411
Score = 134 bits (287), Expect(2) = 5e-046
Identities = 51/72 (70%), Positives = 61/72 (84%)
Frame = +3 / +3
Query: 336 GSCFEIKCDKPVECSGKPVVVHITDMNYEPIAAYHFDLAGTAFGAMAKKGEEEKLRKAGI 515
GSCFE+KC KP CSG+P +V ITD N EPIAAYHFDL+G AFG MAKKG+E+KLR AG
Sbjct: 3 GSCFELKCTKPEACSGEPTIVTITDKNEEPIAAYHFDLSGHAFGTMAKKGQEQKLRDAGE 182
Query: 516 IDMQFRRVKCKY 551
++++FRRVKCKY
Sbjct: 183 VEIKFRRVKCKY 218
Score = 108 bits (231), Expect = 6e-023
Identities = 48/87 (55%), Positives = 58/87 (66%)
Frame = -2 / -3
Query: 595 LGPHPFSRWKVTLESYLHLTLRNCMSMMPALRSFSSSPFLAMAPNAVPAKSKWYAAIGS* 416
L P ++ + YLHLT RN +S PA RSF S PFLAM P A P +SKWYAA+GS
Sbjct: 262 LEPFSTWKFTLVPSGYLHLTRRNLISTSPASRSFCSWPFLAMVPKAWPDRSKWYAAMGSS 83
Query: 415 FMSVMCTTTGLPEHSTGLSHLISKQDP 335
F+SVM T G PE ++GL HL SKQ+P
Sbjct: 82 FLSVMVTMVGSPEQASGLVHLSSKQEP 2
Score = 71.2 bits (149), Expect(2) = 5e-046
Identities = 28/61 (45%), Positives = 36/61 (59%)
Frame = +3 / +3
Query: 555 SKVTFHLEKGCGPNYLALLVKYXXXXXXXXXXXXKEKGSDTYEPLKHSWGAIWRKDSDKP 734
+KV FH+EKG PNYLAL++K+ K KG D + LK SWGA+WR D+
Sbjct: 228 TKVNFHVEKGSSPNYLALVIKFLQGDGDVVAVDIKPKGKDKWIELKESWGAVWRIDTPDK 407
Query: 735 L 737
L
Sbjct: 408 L 410
>gb|CV061225.1|CV061225 BNEL66d10 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL66d10 5' similar to Oryza sativa
beta-expansin, mRNA sequence
Length = 539
Score = 104 bits (222), Expect(2) = 7e-046
Identities = 40/59 (67%), Positives = 49/59 (83%)
Frame = +3 / +1
Query: 375 CSGKPVVVHITDMNYEPIAAYHFDLAGTAFGAMAKKGEEEKLRKAGIIDMQFRRVKCKY 551
CSG P V ITDMNY+P++ YHFDL+GTAFGAMAK G ++LR AGII+MQF+RV C+Y
Sbjct: 319 CSGVPKTVIITDMNYDPVSRYHFDLSGTAFGAMAKYGRNDELRHAGIINMQFKRVPCQY 495
Score = 100 bits (213), Expect(2) = 7e-046
Identities = 35/60 (58%), Positives = 44/60 (73%)
Frame = +3 / +1
Query: 180 WLDAKATWYGKPTXXXXXXXXXXXXYKDVNKPPFNSMGACGNIPIFKDGLGCGSCFEIKC 359
WLDAKATWYG+PT +K+VN PPF+SM +CGN P+FKDG GCGSC++I+C
Sbjct: 118 WLDAKATWYGRPTGAGPDDNGGACGFKNVNLPPFSSMTSCGNQPLFKDGKGCGSCYQIRC 297
Score = 87.2 bits (184), Expect(3) = 1e-024
Identities = 38/60 (63%), Positives = 42/60 (70%)
Frame = -2 / -1
Query: 550 YLHLTLRNCMSMMPALRSFSSSPFLAMAPNAVPAKSKWYAAIGS*FMSVMCTTTGLPEHS 371
Y H TL NCM +MPA RS S P+LAMAP AVP +SKW GS*FMSVM T G PEH+
Sbjct: 494 YWHGTLLNCMLIMPAWRSSSLRPYLAMAPKAVPLRSKW*RETGS*FMSVMITVLGTPEHA 315
Score = 41.4 bits (84), Expect(3) = 1e-024
Identities = 19/32 (59%), Positives = 20/32 (62%)
Frame = -2 / -1
Query: 358 HLISKQDPQPRPSLKMGMLPHAPMLLKGGLFT 263
HLI Q+PQP PSLK G LP M KGG T
Sbjct: 296 HLIW*QEPQPLPSLKSGWLPQEVMEEKGGKLT 201
Score = 23.1 bits (44), Expect(3) = 1e-024
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -2 / -1
Query: 205 YHVALASSQ 179
YHVALASSQ
Sbjct: 143 YHVALASSQ 117
>gb|CV054400.1|CV054400 BNEL10B12 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL10B12 5' similar to Oryza sativa
beta-expansin, mRNA sequence
Length = 533
Score = 104 bits (222), Expect(2) = 7e-046
Identities = 40/59 (67%), Positives = 49/59 (83%)
Frame = +3 / +3
Query: 375 CSGKPVVVHITDMNYEPIAAYHFDLAGTAFGAMAKKGEEEKLRKAGIIDMQFRRVKCKY 551
CSG P V ITDMNY+P++ YHFDL+GTAFGAMAK G ++LR AGII+MQF+RV C+Y
Sbjct: 321 CSGVPKTVIITDMNYDPVSRYHFDLSGTAFGAMAKYGRNDELRHAGIINMQFKRVPCQY 497
Score = 100 bits (213), Expect(2) = 7e-046
Identities = 35/60 (58%), Positives = 44/60 (73%)
Frame = +3 / +3
Query: 180 WLDAKATWYGKPTXXXXXXXXXXXXYKDVNKPPFNSMGACGNIPIFKDGLGCGSCFEIKC 359
WLDAKATWYG+PT +K+VN PPF+SM +CGN P+FKDG GCGSC++I+C
Sbjct: 120 WLDAKATWYGRPTGAGPDDNGGACGFKNVNLPPFSSMTSCGNQPLFKDGKGCGSCYQIRC 299
Score = 87.2 bits (184), Expect(3) = 1e-024
Identities = 38/60 (63%), Positives = 42/60 (70%)
Frame = -2 / -2
Query: 550 YLHLTLRNCMSMMPALRSFSSSPFLAMAPNAVPAKSKWYAAIGS*FMSVMCTTTGLPEHS 371
Y H TL NCM +MPA RS S P+LAMAP AVP +SKW GS*FMSVM T G PEH+
Sbjct: 496 YWHGTLLNCMLIMPAWRSSSLRPYLAMAPKAVPLRSKW*RETGS*FMSVMITVLGTPEHA 317
Score = 41.4 bits (84), Expect(3) = 1e-024
Identities = 19/32 (59%), Positives = 20/32 (62%)
Frame = -2 / -2
Query: 358 HLISKQDPQPRPSLKMGMLPHAPMLLKGGLFT 263
HLI Q+PQP PSLK G LP M KGG T
Sbjct: 298 HLIW*QEPQPLPSLKSGWLPQEVMEEKGGKLT 203
Score = 23.1 bits (44), Expect(3) = 1e-024
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -2 / -2
Query: 205 YHVALASSQ 179
YHVALASSQ
Sbjct: 145 YHVALASSQ 119
>gb|BU981754.1|BU981754 HA24I17r HA Hordeum vulgare subsp. vulgare cDNA clone HA24I17
5-PRIME, mRNA sequence
Length = 495
Score = 104 bits (222), Expect(2) = 7e-046
Identities = 40/59 (67%), Positives = 49/59 (83%)
Frame = +3 / +1
Query: 375 CSGKPVVVHITDMNYEPIAAYHFDLAGTAFGAMAKKGEEEKLRKAGIIDMQFRRVKCKY 551
CSG P V ITDMNY+P++ YHFDL+GTAFGAMAK G ++LR AGII+MQF+RV C+Y
Sbjct: 319 CSGVPKTVIITDMNYDPVSRYHFDLSGTAFGAMAKYGRNDELRHAGIINMQFKRVPCQY 495
Score = 100 bits (213), Expect(2) = 7e-046
Identities = 35/60 (58%), Positives = 44/60 (73%)
Frame = +3 / +1
Query: 180 WLDAKATWYGKPTXXXXXXXXXXXXYKDVNKPPFNSMGACGNIPIFKDGLGCGSCFEIKC 359
WLDAKATWYG+PT +K+VN PPF+SM +CGN P+FKDG GCGSC++I+C
Sbjct: 118 WLDAKATWYGRPTGAGPDDNGGACGFKNVNLPPFSSMTSCGNQPLFKDGKGCGSCYQIRC 297
Score = 86.8 bits (183), Expect(3) = 1e-024
Identities = 38/60 (63%), Positives = 42/60 (70%)
Frame = -2 / -2
Query: 550 YLHLTLRNCMSMMPALRSFSSSPFLAMAPNAVPAKSKWYAAIGS*FMSVMCTTTGLPEHS 371
Y H TL NCM +MPA RS S P+LAMAP AVP +SKW GS*FMSVM T G PEH+
Sbjct: 494 YWHGTLLNCMLIMPAWRSSSLRPYLAMAPKAVPLRSKW*RETGS*FMSVMITVFGTPEHA 315
Score = 41.4 bits (84), Expect(3) = 1e-024
Identities = 19/32 (59%), Positives = 20/32 (62%)
Frame = -2 / -2
Query: 358 HLISKQDPQPRPSLKMGMLPHAPMLLKGGLFT 263
HLI Q+PQP PSLK G LP M KGG T
Sbjct: 296 HLIW*QEPQPLPSLKSGWLPQEVMEEKGGKLT 201
Score = 23.1 bits (44), Expect(3) = 1e-024
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -2 / -2
Query: 205 YHVALASSQ 179
YHVALASSQ
Sbjct: 143 YHVALASSQ 117
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 594,935,164
Number of Sequences: 312970
Number of extensions: 9608883
Number of successful extensions: 107835
Number of sequences better than 1.0e-020: 173
length of database: 58,378,179
effective HSP length: 53
effective length of database: 41,790,769
effective search space used: 15546166068
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)