TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3071667.2.1
(597 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AL501734.1|AL501734 AL501734 Hordeum vulgare Barke roots... 183 7e-053
gb|BM371235.1|BM371235 EBro04_SQ003_O18_R root, 3 week, sal... 205 1e-052
gb|AV917894.1|AV917894 AV917894 K. Sato unpublished cDNA li... 191 3e-048
gb|AV929175.1|AV929175 AV929175 K. Sato unpublished cDNA li... 191 3e-048
gb|BJ448569.1|BJ448569 BJ448569 K. Sato unpublished cDNA li... 191 3e-048
gb|BJ456291.1|BJ456291 BJ456291 K. Sato unpublished cDNA li... 191 3e-048
gb|BQ464230.1|BQ464230 HF01L06T HF Hordeum vulgare subsp. v... 191 3e-048
gb|BQ466268.1|BQ466268 HT02B02r HT Hordeum vulgare subsp. v... 191 3e-048
gb|BQ659782.1|BQ659782 HF01L06w HF Hordeum vulgare subsp. v... 191 3e-048
gb|BU981973.1|BU981973 HA25C12r HA Hordeum vulgare subsp. v... 191 3e-048
gb|CA000617.1|CA000617 HS07N10u HS Hordeum vulgare subsp. v... 191 3e-048
gb|CA009784.1|CA009784 HT12M08u HT Hordeum vulgare subsp. v... 191 3e-048
gb|CA015545.1|CA015545 HT14K09r HT Hordeum vulgare subsp. v... 191 3e-048
gb|CA021407.1|CA021407 HZ40A05r HZ Hordeum vulgare subsp. v... 185 2e-046
gb|BQ761582.1|BQ761582 EBem10_SQ001_N02_R embryo, 2 Day ger... 176 1e-043
gb|CB877540.1|CB877540 HP05E21T HP Hordeum vulgare subsp. v... 165 2e-043
gb|BI948988.1|BI948988 HVSMEl0011N01f Hordeum vulgare spike... 173 6e-043
gb|BU984313.1|BU984313 HF03J09r HF Hordeum vulgare subsp. v... 173 6e-043
gb|CV060332.1|CV060332 BNEL57a10 Barley EST endosperm libra... 160 6e-039
gb|BF260792.2|BF260792 HVSMEf0022P08f Hordeum vulgare seedl... 142 4e-037
gb|BF267540.2|BF267540 HV_CEa0018D16f Hordeum vulgare seedl... 153 7e-037
gb|AV921807.1|AV921807 AV921807 K. Sato unpublished cDNA li... 153 7e-037
gb|AV931272.1|AV931272 AV931272 K. Sato unpublished cDNA li... 153 7e-037
gb|BM815988.1|BM815988 HC108H09_SK.ab1 HC Hordeum vulgare s... 153 7e-037
gb|BU972798.1|BU972798 HB22L24r BC Hordeum vulgare subsp. v... 153 7e-037
gb|BJ544355.1|BJ544355 BJ544355 K. Sato unpublished cDNA li... 153 7e-037
gb|BJ544525.1|BJ544525 BJ544525 K. Sato unpublished cDNA li... 153 7e-037
gb|BJ545493.1|BJ545493 BJ545493 K. Sato unpublished cDNA li... 153 7e-037
gb|BJ545810.1|BJ545810 BJ545810 K. Sato unpublished cDNA li... 153 7e-037
gb|BJ545985.1|BJ545985 BJ545985 K. Sato unpublished cDNA li... 153 7e-037
gb|BJ548158.1|BJ548158 BJ548158 K. Sato unpublished cDNA li... 153 7e-037
gb|BJ548794.1|BJ548794 BJ548794 K. Sato unpublished cDNA li... 153 7e-037
dbj|AB055519.1| Hordeum vulgare mRNA for mitochondrial alde... 153 7e-037
gb|BI776695.2|BI776695 EBpi07_SQ001_H11_R pistil, 12 DPA, n... 152 2e-036
gb|AW983019.2|AW983019 HVSMEg0004N09f Hordeum vulgare pre-a... 151 2e-036
gb|BE194107.2|BE194107 HVSMEh0084A24f Hordeum vulgare 5-45 ... 151 2e-036
gb|BQ656750.1|BQ656750 HA02F05u HA Hordeum vulgare subsp. v... 149 2e-035
gb|CA027624.1|CA027624 HZ59I04r HZ Hordeum vulgare subsp. v... 149 2e-035
gb|CA018967.1|CA018967 HV10E09r HV Hordeum vulgare subsp. v... 147 4e-035
gb|BJ546487.1|BJ546487 BJ546487 K. Sato unpublished cDNA li... 146 1e-034
gb|BJ546503.1|BJ546503 BJ546503 K. Sato unpublished cDNA li... 146 1e-034
gb|BF253896.2|BF253896 HVSMEf0002G19f Hordeum vulgare seedl... 137 5e-033
gb|BG300455.1|BG300455 HVSMEb0017B23f Hordeum vulgare seedl... 135 2e-031
gb|BI949913.1|BI949913 HVSMEl0016O20f Hordeum vulgare spike... 134 3e-031
gb|BF267588.2|BF267588 HV_CEa0018F16f Hordeum vulgare seedl... 89 4e-031
gb|BJ549890.1|BJ549890 BJ549890 K. Sato unpublished cDNA li... 121 4e-027
gb|AV913129.1|AV913129 AV913129 K. Sato unpublished cDNA li... 120 8e-027
gb|BM377612.2|BM377612 EBem04_SQ003_K14_R embryo, 12 DPA, n... 109 2e-023
gb|BM371740.2|BM371740 EBma08_SQ003_M14_R maternal, 28 DPA,... 109 2e-023
gb|AV832590.1|AV832590 AV832590 K. Sato unpublished cDNA li... 107 4e-023
gb|BG368878.2|BG368878 HVSMEi0021B19f Hordeum vulgare 20 DA... 107 4e-023
gb|BJ463439.1|BJ463439 BJ463439 K. Sato unpublished cDNA li... 107 4e-023
gb|BJ466421.1|BJ466421 BJ466421 K. Sato unpublished cDNA li... 107 4e-023
gb|BJ468318.1|BJ468318 BJ468318 K. Sato unpublished cDNA li... 107 4e-023
gb|BJ471121.1|BJ471121 BJ471121 K. Sato unpublished cDNA li... 107 4e-023
gb|BJ473517.1|BJ473517 BJ473517 K. Sato unpublished cDNA li... 107 4e-023
gb|BJ475564.1|BJ475564 BJ475564 K. Sato unpublished cDNA li... 107 4e-023
gb|BJ475971.1|BJ475971 BJ475971 K. Sato unpublished cDNA li... 107 4e-023
gb|BQ663837.1|BQ663837 HU04E06u HU Hordeum vulgare subsp. v... 107 4e-023
gb|BQ664128.1|BQ664128 HV01P19w HV Hordeum vulgare subsp. v... 107 4e-023
gb|BU986428.1|BU986428 HF11M21r HF Hordeum vulgare subsp. v... 107 4e-023
gb|CA019787.1|CA019787 HV13C16r HV Hordeum vulgare subsp. v... 107 4e-023
gb|CB881237.1|CB881237 HM09D03w HM Hordeum vulgare subsp. v... 107 4e-023
gb|CV060030.1|CV060030 BNEL53f12 Barley EST endosperm libra... 107 4e-023
dbj|AB063178.1| Hordeum vulgare BBD2 mRNA for betaine aldeh... 107 4e-023
gb|BQ767898.1|BQ767898 EBro08_SQ010_K04_R root, 3 week, dro... 107 6e-023
gb|BQ766572.1|BQ766572 EBro08_SQ006_A18_R root, 3 week, dro... 106 1e-022
gb|BJ475484.1|BJ475484 BJ475484 K. Sato unpublished cDNA li... 105 2e-022
gb|CV063841.1|CV063841 BNEL93g5 Barley EST endosperm librar... 104 4e-022
gb|AV834368.1|AV834368 AV834368 K. Sato unpublished cDNA li... 101 4e-021
gb|AJ436269.1|AJ436269 AJ436269 S00002 Hordeum vulgare subs... 101 4e-021
dbj|AB063179.1| Hordeum vulgare BBD1 mRNA for betaine aldeh... 101 4e-021
>gb|AL501734.1|AL501734 AL501734 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW05C24u 3', mRNA sequence
Length = 556
Score = 183 bits (394), Expect(2) = 7e-053
Identities = 70/87 (80%), Positives = 81/87 (93%)
Frame = -2 / -1
Query: 539 KANCTRYGLAAGIVTKSLDVANRVSRSVRAGTVWVNCYFAFDPDAPFGGYKMSGFGRDQG 360
+ CT+YGLAAGI+ K+LD+AN+VSRSVRAGTVWVNCYFAFDP+APFGGYKMSGFGRDQG
Sbjct: 487 RPTCTKYGLAAGIIPKNLDIANKVSRSVRAGTVWVNCYFAFDPEAPFGGYKMSGFGRDQG 308
Query: 359 LAAMDKYLQVKSVITALPDSPWY*VEP 279
+ A+DKY+QVKSVITA+PDSPWY* P
Sbjct: 307 MMAIDKYMQVKSVITAVPDSPWY*RWP 227
Score = 158 bits (340), Expect(2) = 9e-045
Identities = 67/81 (82%), Positives = 71/81 (87%)
Frame = +1 / +3
Query: 292 YHGESGSAVMTLLTCRYLSMAASPWSRPKPLILYPPKGASGSKAK*QFTHTVPARTDRDT 471
Y GESG+AV+TLLTC YLSMA PWSRPKPLILYPPKGASGSKAK*QFTHTVPARTD DT
Sbjct: 240 YQGESGTAVITLLTCMYLSMAIMPWSRPKPLILYPPKGASGSKAK*QFTHTVPARTDLDT 419
Query: 472 RLATSRLLVTIPAASPYLVQL 534
LA S+ L IPAASPYLVQ+
Sbjct: 420 LLAMSKFLGMIPAASPYLVQV 482
Score = 43.7 bits (89), Expect(2) = 7e-053
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = -2 / -3
Query: 587 PVMSLMKFKTVDEVIEKAN 531
PVMSLMKFKTVDE IEKAN
Sbjct: 536 PVMSLMKFKTVDEAIEKAN 480
Score = 41.4 bits (84), Expect(2) = 9e-045
Identities = 17/20 (85%), Positives = 19/20 (95%)
Frame = +1 / +1
Query: 529 QLAFSITSSTVLNFMRDMTG 588
+LAFSI SSTVLNFMRD+TG
Sbjct: 478 KLAFSIASSTVLNFMRDITG 537
>gb|BM371235.1|BM371235 EBro04_SQ003_O18_R root, 3 week, salt-stressed, cv Optic, EBro04
Hordeum vulgare subsp. vulgare cDNA clone
EBro04_SQ003_O18 5', mRNA sequence
Length = 423
Score = 205 bits (443), Expect = 1e-052
Identities = 80/94 (85%), Positives = 90/94 (95%)
Frame = -2 / +3
Query: 560 TVDEVIEKANCTRYGLAAGIVTKSLDVANRVSRSVRAGTVWVNCYFAFDPDAPFGGYKMS 381
TVDE IEKANCT+YGLAAGI+TK+LD+AN+VSRSVRAGTVWVNCYFAFDP+APFGGYKMS
Sbjct: 3 TVDEAIEKANCTKYGLAAGIITKNLDIANKVSRSVRAGTVWVNCYFAFDPEAPFGGYKMS 182
Query: 380 GFGRDQGLAAMDKYLQVKSVITALPDSPWY*VEP 279
GFGRDQG+ A+DKY+QVKSVITA+PDSPWY* P
Sbjct: 183 GFGRDQGMMAIDKYMQVKSVITAVPDSPWY*RWP 284
Score = 179 bits (385), Expect = 1e-044
Identities = 77/90 (85%), Positives = 80/90 (88%)
Frame = +1 / -3
Query: 292 YHGESGSAVMTLLTCRYLSMAASPWSRPKPLILYPPKGASGSKAK*QFTHTVPARTDRDT 471
Y GESG+AV+TLLTC YLSMA PWSRPKPLILYPPKGASGSKAK*QFTHTVPARTD DT
Sbjct: 271 YQGESGTAVITLLTCMYLSMAIMPWSRPKPLILYPPKGASGSKAK*QFTHTVPARTDLDT 92
Query: 472 RLATSRLLVTIPAASPYLVQLAFSITSSTV 561
LA S+ LV IPAASPYLVQLAFSI SSTV
Sbjct: 91 LLAMSKFLVMIPAASPYLVQLAFSIASSTV 2
>gb|AV917894.1|AV917894 AV917894 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags11p17 3', mRNA sequence
Length = 614
Score = 191 bits (411), Expect = 3e-048
Identities = 74/101 (73%), Positives = 88/101 (87%)
Frame = -2 / -2
Query: 596 IFGPVMSLMKFKTVDEVIEKANCTRYGLAAGIVTKSLDVANRVSRSVRAGTVWVNCYFAF 417
IFGPVM+LMKFKT++EVI+KAN TRYGLAAG+VTK++D N VSRSVR+G VWVNCYFAF
Sbjct: 376 IFGPVMALMKFKTMEEVIQKANSTRYGLAAGVVTKNIDTMNTVSRSVRSGVVWVNCYFAF 197
Query: 416 DPDAPFGGYKMSGFGRDQGLAAMDKYLQVKSVITALPDSPW 294
DPDAPFGG KMSGFG+D G A+DKYL K+V+T L ++PW
Sbjct: 196 DPDAPFGGCKMSGFGKDMGTDALDKYLHTKTVVTPLYNTPW 74
Score = 140 bits (301), Expect = 5e-033
Identities = 65/96 (67%), Positives = 68/96 (70%)
Frame = +1 / +3
Query: 310 SAVMTLLTCRYLSMAASPWSRPKPLILYPPKGASGSKAK*QFTHTVPARTDRDTRLATSR 489
S V T+L CRYLS A+ P S PKPLIL PP GASGSKAK*Q T T P TDRDT S
Sbjct: 90 SGVTTVLVCRYLSRASVPMSLPKPLILQPPNGASGSKAK*QLTQTTPDLTDRDTVFMVSM 269
Query: 490 LLVTIPAASPYLVQLAFSITSSTVLNFMRDMTGPKI 597
LVT PAA PY V AF ITSS VLNFMR +TGPKI
Sbjct: 270 FLVTTPAARPYRVLFAF*ITSSIVLNFMRAITGPKI 377
>gb|AV929175.1|AV929175 AV929175 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd11e16 3', mRNA sequence
Length = 636
Score = 191 bits (411), Expect = 3e-048
Identities = 74/101 (73%), Positives = 88/101 (87%)
Frame = -2 / -3
Query: 596 IFGPVMSLMKFKTVDEVIEKANCTRYGLAAGIVTKSLDVANRVSRSVRAGTVWVNCYFAF 417
IFGPVM+LMKFKT++EVI+KAN TRYGLAAG+VTK++D N VSRSVR+G VWVNCYFAF
Sbjct: 433 IFGPVMALMKFKTMEEVIQKANSTRYGLAAGVVTKNIDTMNTVSRSVRSGVVWVNCYFAF 254
Query: 416 DPDAPFGGYKMSGFGRDQGLAAMDKYLQVKSVITALPDSPW 294
DPDAPFGG KMSGFG+D G A+DKYL K+V+T L ++PW
Sbjct: 253 DPDAPFGGCKMSGFGKDMGTDALDKYLHTKTVVTPLYNTPW 131
Score = 140 bits (301), Expect = 5e-033
Identities = 65/96 (67%), Positives = 68/96 (70%)
Frame = +1 / +3
Query: 310 SAVMTLLTCRYLSMAASPWSRPKPLILYPPKGASGSKAK*QFTHTVPARTDRDTRLATSR 489
S V T+L CRYLS A+ P S PKPLIL PP GASGSKAK*Q T T P TDRDT S
Sbjct: 147 SGVTTVLVCRYLSRASVPMSLPKPLILQPPNGASGSKAK*QLTQTTPDLTDRDTVFMVSM 326
Query: 490 LLVTIPAASPYLVQLAFSITSSTVLNFMRDMTGPKI 597
LVT PAA PY V AF ITSS VLNFMR +TGPKI
Sbjct: 327 FLVTTPAARPYRVLFAF*ITSSIVLNFMRAITGPKI 434
>gb|BJ448569.1|BJ448569 BJ448569 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak20g24 5', mRNA sequence
Length = 670
Score = 191 bits (411), Expect = 3e-048
Identities = 74/101 (73%), Positives = 88/101 (87%)
Frame = -2 / +2
Query: 596 IFGPVMSLMKFKTVDEVIEKANCTRYGLAAGIVTKSLDVANRVSRSVRAGTVWVNCYFAF 417
IFGPVM+LMKFKT++EVI+KAN TRYGLAAG+VTK++D N VSRSVR+G VWVNCYFAF
Sbjct: 332 IFGPVMALMKFKTMEEVIQKANSTRYGLAAGVVTKNIDTMNTVSRSVRSGVVWVNCYFAF 511
Query: 416 DPDAPFGGYKMSGFGRDQGLAAMDKYLQVKSVITALPDSPW 294
DPDAPFGG KMSGFG+D G A+DKYL K+V+T L ++PW
Sbjct: 512 DPDAPFGGCKMSGFGKDMGTDALDKYLHTKTVVTPLYNTPW 634
Score = 140 bits (301), Expect = 5e-033
Identities = 65/96 (67%), Positives = 68/96 (70%)
Frame = +1 / -2
Query: 310 SAVMTLLTCRYLSMAASPWSRPKPLILYPPKGASGSKAK*QFTHTVPARTDRDTRLATSR 489
S V T+L CRYLS A+ P S PKPLIL PP GASGSKAK*Q T T P TDRDT S
Sbjct: 618 SGVTTVLVCRYLSRASVPMSLPKPLILQPPNGASGSKAK*QLTQTTPDLTDRDTVFMVSM 439
Query: 490 LLVTIPAASPYLVQLAFSITSSTVLNFMRDMTGPKI 597
LVT PAA PY V AF ITSS VLNFMR +TGPKI
Sbjct: 438 FLVTTPAARPYRVLFAF*ITSSIVLNFMRAITGPKI 331
>gb|BJ456291.1|BJ456291 BJ456291 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak20g24 3', mRNA sequence
Length = 706
Score = 191 bits (411), Expect = 3e-048
Identities = 74/101 (73%), Positives = 88/101 (87%)
Frame = -2 / -3
Query: 596 IFGPVMSLMKFKTVDEVIEKANCTRYGLAAGIVTKSLDVANRVSRSVRAGTVWVNCYFAF 417
IFGPVM+LMKFKT++EVI+KAN TRYGLAAG+VTK++D N VSRSVR+G VWVNCYFAF
Sbjct: 374 IFGPVMALMKFKTMEEVIQKANSTRYGLAAGVVTKNIDTMNTVSRSVRSGVVWVNCYFAF 195
Query: 416 DPDAPFGGYKMSGFGRDQGLAAMDKYLQVKSVITALPDSPW 294
DPDAPFGG KMSGFG+D G A+DKYL K+V+T L ++PW
Sbjct: 194 DPDAPFGGCKMSGFGKDMGTDALDKYLHTKTVVTPLYNTPW 72
Score = 140 bits (301), Expect = 5e-033
Identities = 65/96 (67%), Positives = 68/96 (70%)
Frame = +1 / +1
Query: 310 SAVMTLLTCRYLSMAASPWSRPKPLILYPPKGASGSKAK*QFTHTVPARTDRDTRLATSR 489
S V T+L CRYLS A+ P S PKPLIL PP GASGSKAK*Q T T P TDRDT S
Sbjct: 88 SGVTTVLVCRYLSRASVPMSLPKPLILQPPNGASGSKAK*QLTQTTPDLTDRDTVFMVSM 267
Query: 490 LLVTIPAASPYLVQLAFSITSSTVLNFMRDMTGPKI 597
LVT PAA PY V AF ITSS VLNFMR +TGPKI
Sbjct: 268 FLVTTPAARPYRVLFAF*ITSSIVLNFMRAITGPKI 375
>gb|BQ464230.1|BQ464230 HF01L06T HF Hordeum vulgare subsp. vulgare cDNA clone HF01L06
5-PRIME, mRNA sequence
Length = 511
Score = 191 bits (411), Expect = 3e-048
Identities = 74/101 (73%), Positives = 88/101 (87%)
Frame = -2 / +3
Query: 596 IFGPVMSLMKFKTVDEVIEKANCTRYGLAAGIVTKSLDVANRVSRSVRAGTVWVNCYFAF 417
IFGPVM+LMKFKT++EVI+KAN TRYGLAAG+VTK++D N VSRSVR+G VWVNCYFAF
Sbjct: 90 IFGPVMALMKFKTMEEVIQKANSTRYGLAAGVVTKNIDTMNTVSRSVRSGVVWVNCYFAF 269
Query: 416 DPDAPFGGYKMSGFGRDQGLAAMDKYLQVKSVITALPDSPW 294
DPDAPFGG KMSGFG+D G A+DKYL K+V+T L ++PW
Sbjct: 270 DPDAPFGGCKMSGFGKDMGTDALDKYLHTKTVVTPLYNTPW 392
Score = 135 bits (290), Expect = 2e-031
Identities = 64/96 (66%), Positives = 67/96 (69%)
Frame = +1 / -1
Query: 310 SAVMTLLTCRYLSMAASPWSRPKPLILYPPKGASGSKAK*QFTHTVPARTDRDTRLATSR 489
S V T+L CRYLS A+ P S PKPLIL PP GASGSKAK*Q T T P TDRDT S
Sbjct: 376 SGVTTVLVCRYLSRASVPMSLPKPLILQPPNGASGSKAK*QLTQTTPDLTDRDTVFMVSM 197
Query: 490 LLVTIPAASPYLVQLAFSITSSTVLNFMRDMTGPKI 597
LVT PAA P V AF ITSS VLNFMR +TGPKI
Sbjct: 196 FLVTTPAARP*RVLFAF*ITSSIVLNFMRAITGPKI 89
>gb|BQ466268.1|BQ466268 HT02B02r HT Hordeum vulgare subsp. vulgare cDNA clone HT02B02
5-PRIME, mRNA sequence
Length = 438
Score = 191 bits (411), Expect = 3e-048
Identities = 74/101 (73%), Positives = 88/101 (87%)
Frame = -2 / -3
Query: 596 IFGPVMSLMKFKTVDEVIEKANCTRYGLAAGIVTKSLDVANRVSRSVRAGTVWVNCYFAF 417
IFGPVM+LMKFKT++EVI+KAN TRYGLAAG+VTK++D N VSRSVR+G VWVNCYFAF
Sbjct: 415 IFGPVMALMKFKTMEEVIQKANSTRYGLAAGVVTKNIDTMNTVSRSVRSGVVWVNCYFAF 236
Query: 416 DPDAPFGGYKMSGFGRDQGLAAMDKYLQVKSVITALPDSPW 294
DPDAPFGG KMSGFG+D G A+DKYL K+V+T L ++PW
Sbjct: 235 DPDAPFGGCKMSGFGKDMGTDALDKYLHTKTVVTPLYNTPW 113
Score = 135 bits (290), Expect = 2e-031
Identities = 64/96 (66%), Positives = 67/96 (69%)
Frame = +1 / +3
Query: 310 SAVMTLLTCRYLSMAASPWSRPKPLILYPPKGASGSKAK*QFTHTVPARTDRDTRLATSR 489
S V T+L CRYLS A+ P S PKPLIL PP GASGSKAK*Q T T P TDRDT S
Sbjct: 129 SGVTTVLVCRYLSRASVPMSLPKPLILQPPNGASGSKAK*QLTQTTPDLTDRDTVFMVSM 308
Query: 490 LLVTIPAASPYLVQLAFSITSSTVLNFMRDMTGPKI 597
LVT PAA P V AF ITSS VLNFMR +TGPKI
Sbjct: 309 FLVTTPAARP*RVLFAF*ITSSIVLNFMRAITGPKI 416
>gb|BQ659782.1|BQ659782 HF01L06w HF Hordeum vulgare subsp. vulgare cDNA clone HF01L06
3-PRIME, mRNA sequence
Length = 475
Score = 191 bits (411), Expect = 3e-048
Identities = 74/101 (73%), Positives = 88/101 (87%)
Frame = -2 / -2
Query: 596 IFGPVMSLMKFKTVDEVIEKANCTRYGLAAGIVTKSLDVANRVSRSVRAGTVWVNCYFAF 417
IFGPVM+LMKFKT++EVI+KAN TRYGLAAG+VTK++D N VSRSVR+G VWVNCYFAF
Sbjct: 423 IFGPVMALMKFKTMEEVIQKANSTRYGLAAGVVTKNIDTMNTVSRSVRSGVVWVNCYFAF 244
Query: 416 DPDAPFGGYKMSGFGRDQGLAAMDKYLQVKSVITALPDSPW 294
DPDAPFGG KMSGFG+D G A+DKYL K+V+T L ++PW
Sbjct: 243 DPDAPFGGCKMSGFGKDMGTDALDKYLHTKTVVTPLYNTPW 121
Score = 135 bits (290), Expect = 2e-031
Identities = 64/96 (66%), Positives = 67/96 (69%)
Frame = +1 / +2
Query: 310 SAVMTLLTCRYLSMAASPWSRPKPLILYPPKGASGSKAK*QFTHTVPARTDRDTRLATSR 489
S V T+L CRYLS A+ P S PKPLIL PP GASGSKAK*Q T T P TDRDT S
Sbjct: 137 SGVTTVLVCRYLSRASVPMSLPKPLILQPPNGASGSKAK*QLTQTTPDLTDRDTVFMVSM 316
Query: 490 LLVTIPAASPYLVQLAFSITSSTVLNFMRDMTGPKI 597
LVT PAA P V AF ITSS VLNFMR +TGPKI
Sbjct: 317 FLVTTPAARP*RVLFAF*ITSSIVLNFMRAITGPKI 424
>gb|BU981973.1|BU981973 HA25C12r HA Hordeum vulgare subsp. vulgare cDNA clone HA25C12
5-PRIME, mRNA sequence
Length = 572
Score = 191 bits (411), Expect = 3e-048
Identities = 74/101 (73%), Positives = 88/101 (87%)
Frame = -2 / +1
Query: 596 IFGPVMSLMKFKTVDEVIEKANCTRYGLAAGIVTKSLDVANRVSRSVRAGTVWVNCYFAF 417
IFGPVM+LMKFKT++EVI+KAN TRYGLAAG+VTK++D N VSRSVR+G VWVNCYFAF
Sbjct: 160 IFGPVMALMKFKTMEEVIQKANSTRYGLAAGVVTKNIDTMNTVSRSVRSGVVWVNCYFAF 339
Query: 416 DPDAPFGGYKMSGFGRDQGLAAMDKYLQVKSVITALPDSPW 294
DPDAPFGG KMSGFG+D G A+DKYL K+V+T L ++PW
Sbjct: 340 DPDAPFGGCKMSGFGKDMGTDALDKYLHTKTVVTPLYNTPW 462
Score = 135 bits (290), Expect = 2e-031
Identities = 64/96 (66%), Positives = 67/96 (69%)
Frame = +1 / -1
Query: 310 SAVMTLLTCRYLSMAASPWSRPKPLILYPPKGASGSKAK*QFTHTVPARTDRDTRLATSR 489
S V T+L CRYLS A+ P S PKPLIL PP GASGSKAK*Q T T P TDRDT S
Sbjct: 446 SGVTTVLVCRYLSRASVPMSLPKPLILQPPNGASGSKAK*QLTQTTPDLTDRDTVFMVSM 267
Query: 490 LLVTIPAASPYLVQLAFSITSSTVLNFMRDMTGPKI 597
LVT PAA P V AF ITSS VLNFMR +TGPKI
Sbjct: 266 FLVTTPAARP*RVLFAF*ITSSIVLNFMRAITGPKI 159
>gb|CA000617.1|CA000617 HS07N10u HS Hordeum vulgare subsp. vulgare cDNA clone HS07N10
3-PRIME, mRNA sequence
Length = 574
Score = 191 bits (411), Expect = 3e-048
Identities = 74/101 (73%), Positives = 88/101 (87%)
Frame = -2 / -1
Query: 596 IFGPVMSLMKFKTVDEVIEKANCTRYGLAAGIVTKSLDVANRVSRSVRAGTVWVNCYFAF 417
IFGPVM+LMKFKT++EVI+KAN TRYGLAAG+VTK++D N VSRSVR+G VWVNCYFAF
Sbjct: 373 IFGPVMALMKFKTMEEVIQKANSTRYGLAAGVVTKNIDTMNTVSRSVRSGVVWVNCYFAF 194
Query: 416 DPDAPFGGYKMSGFGRDQGLAAMDKYLQVKSVITALPDSPW 294
DPDAPFGG KMSGFG+D G A+DKYL K+V+T L ++PW
Sbjct: 193 DPDAPFGGCKMSGFGKDMGTDALDKYLHTKTVVTPLYNTPW 71
Score = 135 bits (290), Expect = 2e-031
Identities = 64/96 (66%), Positives = 67/96 (69%)
Frame = +1 / +3
Query: 310 SAVMTLLTCRYLSMAASPWSRPKPLILYPPKGASGSKAK*QFTHTVPARTDRDTRLATSR 489
S V T+L CRYLS A+ P S PKPLIL PP GASGSKAK*Q T T P TDRDT S
Sbjct: 87 SGVTTVLVCRYLSRASVPMSLPKPLILQPPNGASGSKAK*QLTQTTPDLTDRDTVFMVSM 266
Query: 490 LLVTIPAASPYLVQLAFSITSSTVLNFMRDMTGPKI 597
LVT PAA P V AF ITSS VLNFMR +TGPKI
Sbjct: 267 FLVTTPAARP*RVLFAF*ITSSIVLNFMRAITGPKI 374
>gb|CA009784.1|CA009784 HT12M08u HT Hordeum vulgare subsp. vulgare cDNA clone HT12M08
3-PRIME, mRNA sequence
Length = 532
Score = 191 bits (411), Expect = 3e-048
Identities = 74/101 (73%), Positives = 88/101 (87%)
Frame = -2 / -2
Query: 596 IFGPVMSLMKFKTVDEVIEKANCTRYGLAAGIVTKSLDVANRVSRSVRAGTVWVNCYFAF 417
IFGPVM+LMKFKT++EVI+KAN TRYGLAAG+VTK++D N VSRSVR+G VWVNCYFAF
Sbjct: 441 IFGPVMALMKFKTMEEVIQKANSTRYGLAAGVVTKNIDTMNTVSRSVRSGVVWVNCYFAF 262
Query: 416 DPDAPFGGYKMSGFGRDQGLAAMDKYLQVKSVITALPDSPW 294
DPDAPFGG KMSGFG+D G A+DKYL K+V+T L ++PW
Sbjct: 261 DPDAPFGGCKMSGFGKDMGTDALDKYLHTKTVVTPLYNTPW 139
Score = 135 bits (290), Expect = 2e-031
Identities = 64/96 (66%), Positives = 67/96 (69%)
Frame = +1 / +2
Query: 310 SAVMTLLTCRYLSMAASPWSRPKPLILYPPKGASGSKAK*QFTHTVPARTDRDTRLATSR 489
S V T+L CRYLS A+ P S PKPLIL PP GASGSKAK*Q T T P TDRDT S
Sbjct: 155 SGVTTVLVCRYLSRASVPMSLPKPLILQPPNGASGSKAK*QLTQTTPDLTDRDTVFMVSM 334
Query: 490 LLVTIPAASPYLVQLAFSITSSTVLNFMRDMTGPKI 597
LVT PAA P V AF ITSS VLNFMR +TGPKI
Sbjct: 335 FLVTTPAARP*RVLFAF*ITSSIVLNFMRAITGPKI 442
>gb|CA015545.1|CA015545 HT14K09r HT Hordeum vulgare subsp. vulgare cDNA clone HT14K09
5-PRIME, mRNA sequence
Length = 584
Score = 191 bits (411), Expect = 3e-048
Identities = 74/101 (73%), Positives = 88/101 (87%)
Frame = -2 / +3
Query: 596 IFGPVMSLMKFKTVDEVIEKANCTRYGLAAGIVTKSLDVANRVSRSVRAGTVWVNCYFAF 417
IFGPVM+LMKFKT++EVI+KAN TRYGLAAG+VTK++D N VSRSVR+G VWVNCYFAF
Sbjct: 144 IFGPVMALMKFKTMEEVIQKANSTRYGLAAGVVTKNIDTMNTVSRSVRSGVVWVNCYFAF 323
Query: 416 DPDAPFGGYKMSGFGRDQGLAAMDKYLQVKSVITALPDSPW 294
DPDAPFGG KMSGFG+D G A+DKYL K+V+T L ++PW
Sbjct: 324 DPDAPFGGCKMSGFGKDMGTDALDKYLHTKTVVTPLYNTPW 446
Score = 135 bits (290), Expect = 2e-031
Identities = 64/96 (66%), Positives = 67/96 (69%)
Frame = +1 / -2
Query: 310 SAVMTLLTCRYLSMAASPWSRPKPLILYPPKGASGSKAK*QFTHTVPARTDRDTRLATSR 489
S V T+L CRYLS A+ P S PKPLIL PP GASGSKAK*Q T T P TDRDT S
Sbjct: 430 SGVTTVLVCRYLSRASVPMSLPKPLILQPPNGASGSKAK*QLTQTTPDLTDRDTVFMVSM 251
Query: 490 LLVTIPAASPYLVQLAFSITSSTVLNFMRDMTGPKI 597
LVT PAA P V AF ITSS VLNFMR +TGPKI
Sbjct: 250 FLVTTPAARP*RVLFAF*ITSSIVLNFMRAITGPKI 143
>gb|CA021407.1|CA021407 HZ40A05r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ40A05
5-PRIME, mRNA sequence
Length = 530
Score = 185 bits (398), Expect = 2e-046
Identities = 73/101 (72%), Positives = 87/101 (86%)
Frame = -2 / -3
Query: 596 IFGPVMSLMKFKTVDEVIEKANCTRYGLAAGIVTKSLDVANRVSRSVRAGTVWVNCYFAF 417
IFGPVM+LMKFKT++EVI+KAN TRYGLAAG+VTK++D N VSRSVR+G VWVN YFAF
Sbjct: 423 IFGPVMALMKFKTMEEVIQKANSTRYGLAAGVVTKNIDTMNTVSRSVRSGVVWVN*YFAF 244
Query: 416 DPDAPFGGYKMSGFGRDQGLAAMDKYLQVKSVITALPDSPW 294
DPDAPFGG KMSGFG+D G A+DKYL K+V+T L ++PW
Sbjct: 243 DPDAPFGGCKMSGFGKDMGTDALDKYLHTKTVVTPLYNTPW 121
Score = 133 bits (285), Expect = 8e-031
Identities = 63/96 (65%), Positives = 66/96 (68%)
Frame = +1 / +2
Query: 310 SAVMTLLTCRYLSMAASPWSRPKPLILYPPKGASGSKAK*QFTHTVPARTDRDTRLATSR 489
S V T+L CRYLS A+ P S PKPLIL PP GASGSKAK Q T T P TDRDT S
Sbjct: 137 SGVTTVLVCRYLSRASVPMSLPKPLILQPPNGASGSKAKYQLTQTTPDLTDRDTVFMVSM 316
Query: 490 LLVTIPAASPYLVQLAFSITSSTVLNFMRDMTGPKI 597
LVT PAA P V AF ITSS VLNFMR +TGPKI
Sbjct: 317 FLVTTPAARP*RVLFAF*ITSSIVLNFMRAITGPKI 424
>gb|BQ761582.1|BQ761582 EBem10_SQ001_N02_R embryo, 2 Day germination, no treatment, cv
Optic, EBem10 Hordeum vulgare subsp. vulgare cDNA clone
EBem10_SQ001_N02 5', mRNA sequence
Length = 347
Score = 176 bits (378), Expect = 1e-043
Identities = 69/90 (76%), Positives = 79/90 (87%)
Frame = -2 / -1
Query: 596 IFGPVMSLMKFKTVDEVIEKANCTRYGLAAGIVTKSLDVANRVSRSVRAGTVWVNCYFAF 417
IFGPVM+LMKFKT++EVI+KAN TRYGLAAG+VTK++D N VSRSVR+G VWVNCYFAF
Sbjct: 272 IFGPVMALMKFKTMEEVIQKANSTRYGLAAGVVTKNIDTMNTVSRSVRSGVVWVNCYFAF 93
Query: 416 DPDAPFGGYKMSGFGRDQGLAAMDKYLQVK 327
DPDAPFGG KMSGFG+D G A+DKYL K
Sbjct: 92 DPDAPFGGCKMSGFGKDMGTDALDKYLHTK 3
Score = 130 bits (278), Expect = 8e-030
Identities = 61/91 (67%), Positives = 64/91 (70%)
Frame = +1 / +1
Query: 325 LLTCRYLSMAASPWSRPKPLILYPPKGASGSKAK*QFTHTVPARTDRDTRLATSRLLVTI 504
+L CRYLS A+ P S PKPLIL PP GASGSKAK*Q T T P TDRDT S LVT
Sbjct: 1 VLVCRYLSRASVPMSLPKPLILQPPNGASGSKAK*QLTQTTPDLTDRDTVFMVSMFLVTT 180
Query: 505 PAASPYLVQLAFSITSSTVLNFMRDMTGPKI 597
PAA P V AF ITSS VLNFMR +TGPKI
Sbjct: 181 PAARP*RVLFAF*ITSSIVLNFMRAITGPKI 273
>gb|CB877540.1|CB877540 HP05E21T HP Hordeum vulgare subsp. vulgare cDNA clone HP05E21
5-PRIME, mRNA sequence
Length = 373
Score = 165 bits (354), Expect(3) = 2e-043
Identities = 64/80 (80%), Positives = 74/80 (92%)
Frame = -2 / +1
Query: 518 GLAAGIVTKSLDVANRVSRSVRAGTVWVNCYFAFDPDAPFGGYKMSGFGRDQGLAAMDKY 339
G + I+TK+LD+AN+VSRSVRAGTVWVNCYFAFDP+APFGGYKMSGFGRDQG+ A+DKY
Sbjct: 31 GWPSWIITKNLDIANKVSRSVRAGTVWVNCYFAFDPEAPFGGYKMSGFGRDQGMMAIDKY 210
Query: 338 LQVKSVITALPDSPWY*VEP 279
+QVKSVITA+PDSPWY* P
Sbjct: 211 MQVKSVITAVPDSPWY*RWP 270
Score = 143 bits (306), Expect(3) = 1e-035
Identities = 61/78 (78%), Positives = 64/78 (82%)
Frame = +1 / -3
Query: 292 YHGESGSAVMTLLTCRYLSMAASPWSRPKPLILYPPKGASGSKAK*QFTHTVPARTDRDT 471
Y GESG+AV+TLLTC YLSMA PWSRPKPLILYPPKGASGSKAK*QFTHTVPARTD DT
Sbjct: 257 YQGESGTAVITLLTCMYLSMAIMPWSRPKPLILYPPKGASGSKAK*QFTHTVPARTDLDT 78
Query: 472 RLATSRLLVTIPAASPYL 525
LA S+ LV I P L
Sbjct: 77 LLAMSKFLVMIHDGQPVL 24
Score = 26.7 bits (52), Expect(3) = 2e-043
Identities = 8/12 (66%), Positives = 12/12 (100%)
Frame = -2 / +3
Query: 545 IEKANCTRYGLA 510
+++ANCT+YGLA
Sbjct: 3 LQEANCTKYGLA 38
Score = 23.1 bits (44), Expect(3) = 1e-035
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +3 / -3
Query: 510 GEPVPGAVGLL 542
G+PV GAVGLL
Sbjct: 38 GQPVLGAVGLL 6
Score = 20.8 bits (39), Expect(3) = 2e-043
Identities = 8/29 (27%), Positives = 14/29 (48%)
Frame = -2 / +2
Query: 272 DGTPSISSCAVYMRHACVLTQLGCCFVLV 186
DG + S + + HAC + G C ++
Sbjct: 263 DGQDNASFIILCIVHACSVQLAGACVTVL 349
Score = 20.3 bits (38), Expect(3) = 1e-035
Identities = 6/9 (66%), Positives = 7/9 (77%)
Frame = +2 / -2
Query: 224 THDACTLHK 250
T ACT+HK
Sbjct: 318 TEQACTMHK 292
>gb|BI948988.1|BI948988 HVSMEl0011N01f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0011N01f, mRNA sequence
Length = 525
Score = 173 bits (373), Expect = 6e-043
Identities = 68/106 (64%), Positives = 85/106 (80%)
Frame = -2 / +3
Query: 596 IFGPVMSLMKFKTVDEVIEKANCTRYGLAAGIVTKSLDVANRVSRSVRAGTVWVNCYFAF 417
IFGPVM LMKF TV+E I +AN TRYGLAAG+VTK++DVANR++RS+RAG VWVNCYFA
Sbjct: 63 IFGPVMCLMKFTTVEEAIARANNTRYGLAAGVVTKNIDVANRMTRSIRAGVVWVNCYFAM 242
Query: 416 DPDAPFGGYKMSGFGRDQGLAAMDKYLQVKSVITALPDSPWY*VEP 279
D D PFGG KMSGFG+D G+ A++++L+ K +T + D PW * P
Sbjct: 243 DSDCPFGGRKMSGFGQDDGMHALEQFLRRKGRVTPVYDFPWL*ASP 380
Score = 128 bits (275), Expect = 2e-029
Identities = 64/106 (60%), Positives = 69/106 (65%)
Frame = +1 / -3
Query: 280 GSTQYHGESGSAVMTLLTCRYLSMAASPWSRPKPLILYPPKGASGSKAK*QFTHTVPART 459
G G+S + V L R S A P S P PLIL PP G S S AK*QFTHT PAR
Sbjct: 379 GEAYSQGKS*TGVTRPLRRRNCSSACMPSSCPNPLILRPPNGQSLSMAK*QFTHTTPARI 200
Query: 460 DRDTRLATSRLLVTIPAASPYLVQLAFSITSSTVLNFMRDMTGPKI 597
DR LATS LVT PAASPYLV LA +I SSTV+NF+R MTGPKI
Sbjct: 199 DRVILLATSMFLVTTPAASPYLVLLALAIASSTVVNFIRHMTGPKI 62
>gb|BU984313.1|BU984313 HF03J09r HF Hordeum vulgare subsp. vulgare cDNA clone HF03J09
5-PRIME, mRNA sequence
Length = 526
Score = 173 bits (373), Expect = 6e-043
Identities = 68/87 (78%), Positives = 78/87 (89%)
Frame = -2 / +3
Query: 596 IFGPVMSLMKFKTVDEVIEKANCTRYGLAAGIVTKSLDVANRVSRSVRAGTVWVNCYFAF 417
IFGPVM+LMKFKT++EVI+KAN TRYGLAAG+VTK++D N VSRSVR+G VWVNCYFAF
Sbjct: 261 IFGPVMALMKFKTMEEVIQKANSTRYGLAAGVVTKNIDTMNTVSRSVRSGVVWVNCYFAF 440
Query: 416 DPDAPFGGYKMSGFGRDQGLAAMDKYL 336
DPDAPFGG KMSGFG+D G A+DKYL
Sbjct: 441 DPDAPFGGCKMSGFGKDMGTDALDKYL 521
Score = 127 bits (273), Expect = 4e-029
Identities = 60/88 (68%), Positives = 62/88 (70%)
Frame = +1 / -1
Query: 334 CRYLSMAASPWSRPKPLILYPPKGASGSKAK*QFTHTVPARTDRDTRLATSRLLVTIPAA 513
CRYLS A+ P S PKPLIL PP GASGSKAK*Q T T P TDRDT S LVT PAA
Sbjct: 523 CRYLSRASVPMSLPKPLILQPPNGASGSKAK*QLTQTTPDLTDRDTVFMVSMFLVTTPAA 344
Query: 514 SPYLVQLAFSITSSTVLNFMRDMTGPKI 597
P V AF ITSS VLNFMR +TGPKI
Sbjct: 343 RP*RVLFAF*ITSSIVLNFMRAITGPKI 260
>gb|CV060332.1|CV060332 BNEL57a10 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL57a10 5' similar to cytosolic
aldehyde dehydrogenase RF2C, mRNA sequence
Length = 551
Score = 160 bits (344), Expect = 6e-039
Identities = 61/89 (68%), Positives = 76/89 (85%)
Frame = -2 / +1
Query: 560 TVDEVIEKANCTRYGLAAGIVTKSLDVANRVSRSVRAGTVWVNCYFAFDPDAPFGGYKMS 381
TV+E I +AN TRYGLAAG+VTK++DVANR++RS+RAG VWVNCYFA D D PFGG KMS
Sbjct: 4 TVEEAIARANNTRYGLAAGVVTKNIDVANRMTRSIRAGVVWVNCYFAMDSDCPFGGRKMS 183
Query: 380 GFGRDQGLAAMDKYLQVKSVITALPDSPW 294
GFG+D G+ A+DK+L VK+V+T + DSPW
Sbjct: 184 GFGKDDGMHALDKFLAVKAVVTPVYDSPW 270
Score = 116 bits (249), Expect = 8e-026
Identities = 58/88 (65%), Positives = 60/88 (68%)
Frame = +1 / -1
Query: 298 GESGSAVMTLLTCRYLSMAASPWSRPKPLILYPPKGASGSKAK*QFTHTVPARTDRDTRL 477
GES + V T LT R LS A P S P PLIL PP G S S AK*QFTHT PAR DR L
Sbjct: 266 GES*TGVTTALTARNLSSACMPSSLPNPLILRPPNGQSLSMAK*QFTHTTPARIDRVILL 87
Query: 478 ATSRLLVTIPAASPYLVQLAFSITSSTV 561
ATS LVT PAASPYLV LA +I SSTV
Sbjct: 86 ATSMFLVTTPAASPYLVLLALAIASSTV 3
>gb|BF260792.2|BF260792 HVSMEf0022P08f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0022P08f, mRNA sequence
Length = 727
Score = 142 bits (304), Expect(2) = 4e-037
Identities = 55/73 (75%), Positives = 64/73 (87%)
Frame = -2 / +3
Query: 596 IFGPVMSLMKFKTVDEVIEKANCTRYGLAAGIVTKSLDVANRVSRSVRAGTVWVNCYFAF 417
IFGPVMSLMKFKTVDE I+ ANCT+YGLA GI+TK+LD+AN+VSRSV AGTVWVNCY AF
Sbjct: 453 IFGPVMSLMKFKTVDEAIDNANCTKYGLAGGIITKNLDIANKVSRSVSAGTVWVNCYLAF 632
Query: 416 DPDAPFGGYKMSG 378
+P+AP GG + G
Sbjct: 633 NPEAPCGGTRRPG 671
Score = 128 bits (275), Expect(2) = 2e-030
Identities = 57/74 (77%), Positives = 62/74 (83%)
Frame = +1 / -1
Query: 376 KPLILYPPKGASGSKAK*QFTHTVPARTDRDTRLATSRLLVTIPAASPYLVQLAFSITSS 555
+P +L PP+GASG KAK*QFTHTVPA TD DT LA S+ LV IP ASPYLVQLA SI SS
Sbjct: 673 EPGLLVPPQGASGLKAK*QFTHTVPALTDLDTLLAMSKFLVMIPPASPYLVQLALSIASS 494
Query: 556 TVLNFMRDMTGPKI 597
TVLNFMRD+TGPKI
Sbjct: 493 TVLNFMRDITGPKI 452
Score = 32.2 bits (64), Expect(2) = 4e-037
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -1 / +1
Query: 393 VQDERLRPGPGAGSHGQVPAGQER 322
VQ++R+RPGPG QV AG R
Sbjct: 655 VQEDRVRPGPGHDGQ*QVHAGYNR 726
Score = 23.1 bits (44), Expect(2) = 2e-030
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +3 / -1
Query: 330 DLQVLVHGCQPLVPAEAAHLVP 395
+L LV G LVPAE LVP
Sbjct: 718 NLHGLVIGHHALVPAEPGLLVP 653
>gb|BF267540.2|BF267540 HV_CEa0018D16f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0018D16f, mRNA sequence
Length = 803
Score = 153 bits (329), Expect = 7e-037
Identities = 57/101 (56%), Positives = 80/101 (79%)
Frame = -2 / +3
Query: 596 IFGPVMSLMKFKTVDEVIEKANCTRYGLAAGIVTKSLDVANRVSRSVRAGTVWVNCYFAF 417
IFGPV S+ KF ++EVI++AN ++YGLAAG+ T +LD AN ++R++RAGT+WVNC+ F
Sbjct: 252 IFGPVQSIFKFNDLNEVIKRANASQYGLAAGVFTNNLDTANTLTRALRAGTIWVNCFDIF 431
Query: 416 DPDAPFGGYKMSGFGRDQGLAAMDKYLQVKSVITALPDSPW 294
D PFGGYKMSG GR++G+ ++ YLQVK+V+TAL + W
Sbjct: 432 DAAIPFGGYKMSGIGREKGIDSLKNYLQVKAVVTALKNPAW 554
Score = 103 bits (219), Expect = 1e-021
Identities = 52/96 (54%), Positives = 57/96 (59%)
Frame = +1 / -2
Query: 310 SAVMTLLTCRYLSMAASPWSRPKPLILYPPKGASGSKAK*QFTHTVPARTDRDTRLATSR 489
SAV T LTCR + P+S P PLILYPPKG + SK QFT VPA R LA SR
Sbjct: 538 SAVTTALTCR*FFRLSMPFSLPMPLILYPPKGIAASKMSKQFTQIVPALRARVKVLAVSR 359
Query: 490 LLVTIPAASPYLVQLAFSITSSTVLNFMRDMTGPKI 597
LLV PAA+PY + A ITS LN D TGP I
Sbjct: 358 LLVKTPAANPYWLAFALLITSLRSLNLKID*TGPNI 251
>gb|AV921807.1|AV921807 AV921807 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags12o18 3', mRNA sequence
Length = 657
Score = 153 bits (329), Expect = 7e-037
Identities = 57/101 (56%), Positives = 80/101 (79%)
Frame = -2 / -2
Query: 596 IFGPVMSLMKFKTVDEVIEKANCTRYGLAAGIVTKSLDVANRVSRSVRAGTVWVNCYFAF 417
IFGPV S+ KF ++EVI++AN ++YGLAAG+ T +LD AN ++R++RAGT+WVNC+ F
Sbjct: 548 IFGPVQSIFKFNDLNEVIKRANASQYGLAAGVFTNNLDTANTLTRALRAGTIWVNCFDIF 369
Query: 416 DPDAPFGGYKMSGFGRDQGLAAMDKYLQVKSVITALPDSPW 294
D PFGGYKMSG GR++G+ ++ YLQVK+V+TAL + W
Sbjct: 368 DAAIPFGGYKMSGIGREKGIDSLKNYLQVKAVVTALKNPAW 246
Score = 103 bits (219), Expect = 1e-021
Identities = 52/96 (54%), Positives = 57/96 (59%)
Frame = +1 / +1
Query: 310 SAVMTLLTCRYLSMAASPWSRPKPLILYPPKGASGSKAK*QFTHTVPARTDRDTRLATSR 489
SAV T LTCR + P+S P PLILYPPKG + SK QFT VPA R LA SR
Sbjct: 262 SAVTTALTCR*FFRLSMPFSLPMPLILYPPKGIAASKMSKQFTQIVPALRARVKVLAVSR 441
Query: 490 LLVTIPAASPYLVQLAFSITSSTVLNFMRDMTGPKI 597
LLV PAA+PY + A ITS LN D TGP I
Sbjct: 442 LLVKTPAANPYWLAFALLITSLRSLNLKID*TGPNI 549
>gb|AV931272.1|AV931272 AV931272 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd19d07 3', mRNA sequence
Length = 556
Score = 153 bits (329), Expect = 7e-037
Identities = 57/101 (56%), Positives = 80/101 (79%)
Frame = -2 / -2
Query: 596 IFGPVMSLMKFKTVDEVIEKANCTRYGLAAGIVTKSLDVANRVSRSVRAGTVWVNCYFAF 417
IFGPV S+ KF ++EVI++AN ++YGLAAG+ T +LD AN ++R++RAGT+WVNC+ F
Sbjct: 516 IFGPVQSIFKFNDLNEVIKRANASQYGLAAGVFTNNLDTANTLTRALRAGTIWVNCFDIF 337
Query: 416 DPDAPFGGYKMSGFGRDQGLAAMDKYLQVKSVITALPDSPW 294
D PFGGYKMSG GR++G+ ++ YLQVK+V+TAL + W
Sbjct: 336 DAAIPFGGYKMSGIGREKGIDSLKNYLQVKAVVTALKNPAW 214
Score = 103 bits (219), Expect = 1e-021
Identities = 52/96 (54%), Positives = 57/96 (59%)
Frame = +1 / +2
Query: 310 SAVMTLLTCRYLSMAASPWSRPKPLILYPPKGASGSKAK*QFTHTVPARTDRDTRLATSR 489
SAV T LTCR + P+S P PLILYPPKG + SK QFT VPA R LA SR
Sbjct: 230 SAVTTALTCR*FFRLSMPFSLPMPLILYPPKGIAASKMSKQFTQIVPALRARVKVLAVSR 409
Query: 490 LLVTIPAASPYLVQLAFSITSSTVLNFMRDMTGPKI 597
LLV PAA+PY + A ITS LN D TGP I
Sbjct: 410 LLVKTPAANPYWLAFALLITSLRSLNLKID*TGPNI 517
>gb|BM815988.1|BM815988 HC108H09_SK.ab1 HC Hordeum vulgare subsp. vulgare cDNA clone
HC108H09_SK.ab1 similar to aldehyde dehydrogenase [Oryza
sativa], T-cytoplasm male sterility restorer factor 2
[Zea mays],aldehyde dehydrogenase (NAD) (EC 1.2.1.3) 2A
precursor, mitochondrial [Nicotiana tabacum],aldehyde
dehydrogenase ALDH2b [Oryza sativa], mRNA sequence
Length = 896
Score = 153 bits (329), Expect = 7e-037
Identities = 57/101 (56%), Positives = 80/101 (79%)
Frame = -2 / +3
Query: 596 IFGPVMSLMKFKTVDEVIEKANCTRYGLAAGIVTKSLDVANRVSRSVRAGTVWVNCYFAF 417
IFGPV S+ KF ++EVI++AN ++YGLAAG+ T +LD AN ++R++RAGT+WVNC+ F
Sbjct: 201 IFGPVQSIFKFNDLNEVIKRANASQYGLAAGVFTNNLDTANTLTRALRAGTIWVNCFDIF 380
Query: 416 DPDAPFGGYKMSGFGRDQGLAAMDKYLQVKSVITALPDSPW 294
D PFGGYKMSG GR++G+ ++ YLQVK+V+TAL + W
Sbjct: 381 DAAIPFGGYKMSGIGREKGIDSLKNYLQVKAVVTALKNPAW 503
Score = 103 bits (219), Expect = 1e-021
Identities = 52/96 (54%), Positives = 57/96 (59%)
Frame = +1 / -2
Query: 310 SAVMTLLTCRYLSMAASPWSRPKPLILYPPKGASGSKAK*QFTHTVPARTDRDTRLATSR 489
SAV T LTCR + P+S P PLILYPPKG + SK QFT VPA R LA SR
Sbjct: 487 SAVTTALTCR*FFRLSMPFSLPMPLILYPPKGIAASKMSKQFTQIVPALRARVKVLAVSR 308
Query: 490 LLVTIPAASPYLVQLAFSITSSTVLNFMRDMTGPKI 597
LLV PAA+PY + A ITS LN D TGP I
Sbjct: 307 LLVKTPAANPYWLAFALLITSLRSLNLKID*TGPNI 200
>gb|BU972798.1|BU972798 HB22L24r BC Hordeum vulgare subsp. vulgare cDNA clone HB22L24
5-PRIME, mRNA sequence
Length = 629
Score = 153 bits (329), Expect = 7e-037
Identities = 57/101 (56%), Positives = 80/101 (79%)
Frame = -2 / +1
Query: 596 IFGPVMSLMKFKTVDEVIEKANCTRYGLAAGIVTKSLDVANRVSRSVRAGTVWVNCYFAF 417
IFGPV S+ KF ++EVI++AN ++YGLAAG+ T +LD AN ++R++RAGT+WVNC+ F
Sbjct: 187 IFGPVQSIFKFNDLNEVIKRANASQYGLAAGVFTNNLDTANTLTRALRAGTIWVNCFDIF 366
Query: 416 DPDAPFGGYKMSGFGRDQGLAAMDKYLQVKSVITALPDSPW 294
D PFGGYKMSG GR++G+ ++ YLQVK+V+TAL + W
Sbjct: 367 DAAIPFGGYKMSGIGREKGIDSLKNYLQVKAVVTALKNPAW 489
Score = 103 bits (219), Expect = 1e-021
Identities = 52/96 (54%), Positives = 57/96 (59%)
Frame = +1 / -1
Query: 310 SAVMTLLTCRYLSMAASPWSRPKPLILYPPKGASGSKAK*QFTHTVPARTDRDTRLATSR 489
SAV T LTCR + P+S P PLILYPPKG + SK QFT VPA R LA SR
Sbjct: 473 SAVTTALTCR*FFRLSMPFSLPMPLILYPPKGIAASKMSKQFTQIVPALRARVKVLAVSR 294
Query: 490 LLVTIPAASPYLVQLAFSITSSTVLNFMRDMTGPKI 597
LLV PAA+PY + A ITS LN D TGP I
Sbjct: 293 LLVKTPAANPYWLAFALLITSLRSLNLKID*TGPNI 186
>gb|BJ544355.1|BJ544355 BJ544355 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak26h06 5', mRNA sequence
Length = 638
Score = 153 bits (329), Expect = 7e-037
Identities = 57/101 (56%), Positives = 80/101 (79%)
Frame = -2 / +1
Query: 596 IFGPVMSLMKFKTVDEVIEKANCTRYGLAAGIVTKSLDVANRVSRSVRAGTVWVNCYFAF 417
IFGPV S+ KF ++EVI++AN ++YGLAAG+ T +LD AN ++R++RAGT+WVNC+ F
Sbjct: 325 IFGPVQSIFKFNDLNEVIKRANASQYGLAAGVFTNNLDTANTLTRALRAGTIWVNCFDIF 504
Query: 416 DPDAPFGGYKMSGFGRDQGLAAMDKYLQVKSVITALPDSPW 294
D PFGGYKMSG GR++G+ ++ YLQVK+V+TAL + W
Sbjct: 505 DAAIPFGGYKMSGIGREKGIDSLKNYLQVKAVVTALKNPAW 627
Score = 103 bits (219), Expect = 1e-021
Identities = 52/96 (54%), Positives = 57/96 (59%)
Frame = +1 / -1
Query: 310 SAVMTLLTCRYLSMAASPWSRPKPLILYPPKGASGSKAK*QFTHTVPARTDRDTRLATSR 489
SAV T LTCR + P+S P PLILYPPKG + SK QFT VPA R LA SR
Sbjct: 611 SAVTTALTCR*FFRLSMPFSLPMPLILYPPKGIAASKMSKQFTQIVPALRARVKVLAVSR 432
Query: 490 LLVTIPAASPYLVQLAFSITSSTVLNFMRDMTGPKI 597
LLV PAA+PY + A ITS LN D TGP I
Sbjct: 431 LLVKTPAANPYWLAFALLITSLRSLNLKID*TGPNI 324
>gb|BJ544525.1|BJ544525 BJ544525 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak30h11 5', mRNA sequence
Length = 696
Score = 153 bits (329), Expect = 7e-037
Identities = 57/101 (56%), Positives = 80/101 (79%)
Frame = -2 / +1
Query: 596 IFGPVMSLMKFKTVDEVIEKANCTRYGLAAGIVTKSLDVANRVSRSVRAGTVWVNCYFAF 417
IFGPV S+ KF ++EVI++AN ++YGLAAG+ T +LD AN ++R++RAGT+WVNC+ F
Sbjct: 337 IFGPVQSIFKFNDLNEVIKRANASQYGLAAGVFTNNLDTANTLTRALRAGTIWVNCFDIF 516
Query: 416 DPDAPFGGYKMSGFGRDQGLAAMDKYLQVKSVITALPDSPW 294
D PFGGYKMSG GR++G+ ++ YLQVK+V+TAL + W
Sbjct: 517 DAAIPFGGYKMSGIGREKGIDSLKNYLQVKAVVTALKNPAW 639
Score = 103 bits (219), Expect = 1e-021
Identities = 52/96 (54%), Positives = 57/96 (59%)
Frame = +1 / -2
Query: 310 SAVMTLLTCRYLSMAASPWSRPKPLILYPPKGASGSKAK*QFTHTVPARTDRDTRLATSR 489
SAV T LTCR + P+S P PLILYPPKG + SK QFT VPA R LA SR
Sbjct: 623 SAVTTALTCR*FFRLSMPFSLPMPLILYPPKGIAASKMSKQFTQIVPALRARVKVLAVSR 444
Query: 490 LLVTIPAASPYLVQLAFSITSSTVLNFMRDMTGPKI 597
LLV PAA+PY + A ITS LN D TGP I
Sbjct: 443 LLVKTPAANPYWLAFALLITSLRSLNLKID*TGPNI 336
>gb|BJ545493.1|BJ545493 BJ545493 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak17a20 3', mRNA sequence
Length = 586
Score = 153 bits (329), Expect = 7e-037
Identities = 57/101 (56%), Positives = 80/101 (79%)
Frame = -2 / -3
Query: 596 IFGPVMSLMKFKTVDEVIEKANCTRYGLAAGIVTKSLDVANRVSRSVRAGTVWVNCYFAF 417
IFGPV S+ KF ++EVI++AN ++YGLAAG+ T +LD AN ++R++RAGT+WVNC+ F
Sbjct: 563 IFGPVQSIFKFNDLNEVIKRANASQYGLAAGVFTNNLDTANTLTRALRAGTIWVNCFDIF 384
Query: 416 DPDAPFGGYKMSGFGRDQGLAAMDKYLQVKSVITALPDSPW 294
D PFGGYKMSG GR++G+ ++ YLQVK+V+TAL + W
Sbjct: 383 DAAIPFGGYKMSGIGREKGIDSLKNYLQVKAVVTALKNPAW 261
Score = 103 bits (219), Expect = 1e-021
Identities = 52/96 (54%), Positives = 57/96 (59%)
Frame = +1 / +1
Query: 310 SAVMTLLTCRYLSMAASPWSRPKPLILYPPKGASGSKAK*QFTHTVPARTDRDTRLATSR 489
SAV T LTCR + P+S P PLILYPPKG + SK QFT VPA R LA SR
Sbjct: 277 SAVTTALTCR*FFRLSMPFSLPMPLILYPPKGIAASKMSKQFTQIVPALRARVKVLAVSR 456
Query: 490 LLVTIPAASPYLVQLAFSITSSTVLNFMRDMTGPKI 597
LLV PAA+PY + A ITS LN D TGP I
Sbjct: 457 LLVKTPAANPYWLAFALLITSLRSLNLKID*TGPNI 564
>gb|BJ545810.1|BJ545810 BJ545810 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak26h06 3', mRNA sequence
Length = 672
Score = 153 bits (329), Expect = 7e-037
Identities = 57/101 (56%), Positives = 80/101 (79%)
Frame = -2 / -2
Query: 596 IFGPVMSLMKFKTVDEVIEKANCTRYGLAAGIVTKSLDVANRVSRSVRAGTVWVNCYFAF 417
IFGPV S+ KF ++EVI++AN ++YGLAAG+ T +LD AN ++R++RAGT+WVNC+ F
Sbjct: 563 IFGPVQSIFKFNDLNEVIKRANASQYGLAAGVFTNNLDTANTLTRALRAGTIWVNCFDIF 384
Query: 416 DPDAPFGGYKMSGFGRDQGLAAMDKYLQVKSVITALPDSPW 294
D PFGGYKMSG GR++G+ ++ YLQVK+V+TAL + W
Sbjct: 383 DAAIPFGGYKMSGIGREKGIDSLKNYLQVKAVVTALKNPAW 261
Score = 103 bits (219), Expect = 1e-021
Identities = 52/96 (54%), Positives = 57/96 (59%)
Frame = +1 / +1
Query: 310 SAVMTLLTCRYLSMAASPWSRPKPLILYPPKGASGSKAK*QFTHTVPARTDRDTRLATSR 489
SAV T LTCR + P+S P PLILYPPKG + SK QFT VPA R LA SR
Sbjct: 277 SAVTTALTCR*FFRLSMPFSLPMPLILYPPKGIAASKMSKQFTQIVPALRARVKVLAVSR 456
Query: 490 LLVTIPAASPYLVQLAFSITSSTVLNFMRDMTGPKI 597
LLV PAA+PY + A ITS LN D TGP I
Sbjct: 457 LLVKTPAANPYWLAFALLITSLRSLNLKID*TGPNI 564
>gb|BJ545985.1|BJ545985 BJ545985 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak30h11 3', mRNA sequence
Length = 624
Score = 153 bits (329), Expect = 7e-037
Identities = 57/101 (56%), Positives = 80/101 (79%)
Frame = -2 / -3
Query: 596 IFGPVMSLMKFKTVDEVIEKANCTRYGLAAGIVTKSLDVANRVSRSVRAGTVWVNCYFAF 417
IFGPV S+ KF ++EVI++AN ++YGLAAG+ T +LD AN ++R++RAGT+WVNC+ F
Sbjct: 535 IFGPVQSIFKFNDLNEVIKRANASQYGLAAGVFTNNLDTANTLTRALRAGTIWVNCFDIF 356
Query: 416 DPDAPFGGYKMSGFGRDQGLAAMDKYLQVKSVITALPDSPW 294
D PFGGYKMSG GR++G+ ++ YLQVK+V+TAL + W
Sbjct: 355 DAAIPFGGYKMSGIGREKGIDSLKNYLQVKAVVTALKNPAW 233
Score = 103 bits (219), Expect = 1e-021
Identities = 52/96 (54%), Positives = 57/96 (59%)
Frame = +1 / +3
Query: 310 SAVMTLLTCRYLSMAASPWSRPKPLILYPPKGASGSKAK*QFTHTVPARTDRDTRLATSR 489
SAV T LTCR + P+S P PLILYPPKG + SK QFT VPA R LA SR
Sbjct: 249 SAVTTALTCR*FFRLSMPFSLPMPLILYPPKGIAASKMSKQFTQIVPALRARVKVLAVSR 428
Query: 490 LLVTIPAASPYLVQLAFSITSSTVLNFMRDMTGPKI 597
LLV PAA+PY + A ITS LN D TGP I
Sbjct: 429 LLVKTPAANPYWLAFALLITSLRSLNLKID*TGPNI 536
>gb|BJ548158.1|BJ548158 BJ548158 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal13d19 3', mRNA sequence
Length = 620
Score = 153 bits (329), Expect = 7e-037
Identities = 57/101 (56%), Positives = 80/101 (79%)
Frame = -2 / -2
Query: 596 IFGPVMSLMKFKTVDEVIEKANCTRYGLAAGIVTKSLDVANRVSRSVRAGTVWVNCYFAF 417
IFGPV S+ KF ++EVI++AN ++YGLAAG+ T +LD AN ++R++RAGT+WVNC+ F
Sbjct: 538 IFGPVQSIFKFNDLNEVIKRANASQYGLAAGVFTNNLDTANTLTRALRAGTIWVNCFDIF 359
Query: 416 DPDAPFGGYKMSGFGRDQGLAAMDKYLQVKSVITALPDSPW 294
D PFGGYKMSG GR++G+ ++ YLQVK+V+TAL + W
Sbjct: 358 DAAIPFGGYKMSGIGREKGIDSLKNYLQVKAVVTALKNPAW 236
Score = 103 bits (219), Expect = 1e-021
Identities = 52/96 (54%), Positives = 57/96 (59%)
Frame = +1 / +3
Query: 310 SAVMTLLTCRYLSMAASPWSRPKPLILYPPKGASGSKAK*QFTHTVPARTDRDTRLATSR 489
SAV T LTCR + P+S P PLILYPPKG + SK QFT VPA R LA SR
Sbjct: 252 SAVTTALTCR*FFRLSMPFSLPMPLILYPPKGIAASKMSKQFTQIVPALRARVKVLAVSR 431
Query: 490 LLVTIPAASPYLVQLAFSITSSTVLNFMRDMTGPKI 597
LLV PAA+PY + A ITS LN D TGP I
Sbjct: 432 LLVKTPAANPYWLAFALLITSLRSLNLKID*TGPNI 539
>gb|BJ548794.1|BJ548794 BJ548794 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal35m14 3', mRNA sequence
Length = 581
Score = 153 bits (329), Expect = 7e-037
Identities = 57/101 (56%), Positives = 80/101 (79%)
Frame = -2 / -2
Query: 596 IFGPVMSLMKFKTVDEVIEKANCTRYGLAAGIVTKSLDVANRVSRSVRAGTVWVNCYFAF 417
IFGPV S+ KF ++EVI++AN ++YGLAAG+ T +LD AN ++R++RAGT+WVNC+ F
Sbjct: 529 IFGPVQSIFKFNDLNEVIKRANASQYGLAAGVFTNNLDTANTLTRALRAGTIWVNCFDIF 350
Query: 416 DPDAPFGGYKMSGFGRDQGLAAMDKYLQVKSVITALPDSPW 294
D PFGGYKMSG GR++G+ ++ YLQVK+V+TAL + W
Sbjct: 349 DAAIPFGGYKMSGIGREKGIDSLKNYLQVKAVVTALKNPAW 227
Score = 103 bits (219), Expect = 1e-021
Identities = 52/96 (54%), Positives = 57/96 (59%)
Frame = +1 / +3
Query: 310 SAVMTLLTCRYLSMAASPWSRPKPLILYPPKGASGSKAK*QFTHTVPARTDRDTRLATSR 489
SAV T LTCR + P+S P PLILYPPKG + SK QFT VPA R LA SR
Sbjct: 243 SAVTTALTCR*FFRLSMPFSLPMPLILYPPKGIAASKMSKQFTQIVPALRARVKVLAVSR 422
Query: 490 LLVTIPAASPYLVQLAFSITSSTVLNFMRDMTGPKI 597
LLV PAA+PY + A ITS LN D TGP I
Sbjct: 423 LLVKTPAANPYWLAFALLITSLRSLNLKID*TGPNI 530
>dbj|AB055519.1| Hordeum vulgare mRNA for mitochondrial aldehyde dehydrogenase ALDH2,
complete cds
Length = 2128
Score = 153 bits (329), Expect = 7e-037
Identities = 57/101 (56%), Positives = 80/101 (79%)
Frame = -2 / +1
Query: 596 IFGPVMSLMKFKTVDEVIEKANCTRYGLAAGIVTKSLDVANRVSRSVRAGTVWVNCYFAF 417
IFGPV S+ KF ++EVI++AN ++YGLAAG+ T +LD AN ++R++RAGT+WVNC+ F
Sbjct: 1423 IFGPVQSIFKFNDLNEVIKRANASQYGLAAGVFTNNLDTANTLTRALRAGTIWVNCFDIF 1602
Query: 416 DPDAPFGGYKMSGFGRDQGLAAMDKYLQVKSVITALPDSPW 294
D PFGGYKMSG GR++G+ ++ YLQVK+V+TAL + W
Sbjct: 1603 DAAIPFGGYKMSGIGREKGIDSLKNYLQVKAVVTALKNPAW 1725
Score = 103 bits (219), Expect = 1e-021
Identities = 52/96 (54%), Positives = 57/96 (59%)
Frame = +1 / -3
Query: 310 SAVMTLLTCRYLSMAASPWSRPKPLILYPPKGASGSKAK*QFTHTVPARTDRDTRLATSR 489
SAV T LTCR + P+S P PLILYPPKG + SK QFT VPA R LA SR
Sbjct: 1709 SAVTTALTCR*FFRLSMPFSLPMPLILYPPKGIAASKMSKQFTQIVPALRARVKVLAVSR 1530
Query: 490 LLVTIPAASPYLVQLAFSITSSTVLNFMRDMTGPKI 597
LLV PAA+PY + A ITS LN D TGP I
Sbjct: 1529 LLVKTPAANPYWLAFALLITSLRSLNLKID*TGPNI 1422
>gb|BI776695.2|BI776695 EBpi07_SQ001_H11_R pistil, 12 DPA, no treatment, cv Optic, EBpi07
Hordeum vulgare subsp. vulgare cDNA clone
EBpi07_SQ001_H11 5', mRNA sequence
Length = 481
Score = 152 bits (326), Expect = 2e-036
Identities = 56/101 (55%), Positives = 80/101 (79%)
Frame = -2 / +2
Query: 596 IFGPVMSLMKFKTVDEVIEKANCTRYGLAAGIVTKSLDVANRVSRSVRAGTVWVNCYFAF 417
IFGPV S+ KF ++EVI++AN ++YGLAAG+ T +LD AN ++R+++AGT+WVNC+ F
Sbjct: 143 IFGPVQSIFKFNDLNEVIKRANASQYGLAAGVFTNNLDTANTLTRALKAGTIWVNCFDIF 322
Query: 416 DPDAPFGGYKMSGFGRDQGLAAMDKYLQVKSVITALPDSPW 294
D PFGGYKMSG GR++G+ ++ YLQVK+V+TAL + W
Sbjct: 323 DAAIPFGGYKMSGIGREKGIDSLKNYLQVKAVVTALKNPAW 445
Score = 103 bits (219), Expect = 1e-021
Identities = 52/96 (54%), Positives = 57/96 (59%)
Frame = +1 / -2
Query: 310 SAVMTLLTCRYLSMAASPWSRPKPLILYPPKGASGSKAK*QFTHTVPARTDRDTRLATSR 489
SAV T LTCR + P+S P PLILYPPKG + SK QFT VPA R LA SR
Sbjct: 429 SAVTTALTCR*FFRLSMPFSLPMPLILYPPKGIAASKMSKQFTQIVPALRARVKVLAVSR 250
Query: 490 LLVTIPAASPYLVQLAFSITSSTVLNFMRDMTGPKI 597
LLV PAA+PY + A ITS LN D TGP I
Sbjct: 249 LLVKTPAANPYWLAFALLITSLRSLNLKID*TGPNI 142
>gb|AW983019.2|AW983019 HVSMEg0004N09f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0004N09f, mRNA sequence
Length = 614
Score = 151 bits (325), Expect = 2e-036
Identities = 56/101 (55%), Positives = 80/101 (79%)
Frame = -2 / +1
Query: 596 IFGPVMSLMKFKTVDEVIEKANCTRYGLAAGIVTKSLDVANRVSRSVRAGTVWVNCYFAF 417
IFGPV S+ KF ++EVI+ AN ++YGLAAG+ T +LD AN ++R+++AGT+WVNC+ F
Sbjct: 85 IFGPVQSIFKFNDLNEVIKMANASQYGLAAGVFTNNLDTANTLTRALKAGTIWVNCFDIF 264
Query: 416 DPDAPFGGYKMSGFGRDQGLAAMDKYLQVKSVITALPDSPW 294
D PFGGYKMSG GR++G+ +++ YLQVK+V+TAL + W
Sbjct: 265 DAAIPFGGYKMSGIGREKGIDSLNNYLQVKAVVTALKNPAW 387
Score = 105 bits (223), Expect = 3e-022
Identities = 53/96 (55%), Positives = 58/96 (60%)
Frame = +1 / -1
Query: 310 SAVMTLLTCRYLSMAASPWSRPKPLILYPPKGASGSKAK*QFTHTVPARTDRDTRLATSR 489
SAV T LTCR L + P+S P PLILYPPKG + SK QFT VPA R LA SR
Sbjct: 371 SAVTTALTCR*LFRLSMPFSLPMPLILYPPKGIAASKMSKQFTQIVPALRARVKVLAVSR 192
Query: 490 LLVTIPAASPYLVQLAFSITSSTVLNFMRDMTGPKI 597
LLV PAA+PY + A ITS LN D TGP I
Sbjct: 191 LLVKTPAANPYWLAFAILITSLRSLNLKID*TGPNI 84
>gb|BE194107.2|BE194107 HVSMEh0084A24f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0084A24f, mRNA sequence
Length = 628
Score = 151 bits (325), Expect = 2e-036
Identities = 56/100 (56%), Positives = 79/100 (79%)
Frame = -2 / +2
Query: 593 FGPVMSLMKFKTVDEVIEKANCTRYGLAAGIVTKSLDVANRVSRSVRAGTVWVNCYFAFD 414
FGPV S+ KF ++EVI++AN ++YGLAAG+ T +LD AN ++R++RAGT+WVNC+ FD
Sbjct: 2 FGPVQSIFKFNDLNEVIKRANASQYGLAAGVFTNNLDTANTLTRALRAGTIWVNCFDIFD 181
Query: 413 PDAPFGGYKMSGFGRDQGLAAMDKYLQVKSVITALPDSPW 294
PFGGYKMSG GR++G+ ++ YLQVK+V+TAL + W
Sbjct: 182 AAIPFGGYKMSGIGREKGIDSLKNYLQVKAVVTALKNPAW 301
Score = 101 bits (215), Expect = 4e-021
Identities = 51/94 (54%), Positives = 56/94 (59%)
Frame = +1 / -2
Query: 310 SAVMTLLTCRYLSMAASPWSRPKPLILYPPKGASGSKAK*QFTHTVPARTDRDTRLATSR 489
SAV T LTCR + P+S P PLILYPPKG + SK QFT VPA R LA SR
Sbjct: 285 SAVTTALTCR*FFRLSMPFSLPMPLILYPPKGIAASKMSKQFTQIVPALRARVKVLAVSR 106
Query: 490 LLVTIPAASPYLVQLAFSITSSTVLNFMRDMTGP 591
LLV PAA+PY + A ITS LN D TGP
Sbjct: 105 LLVKTPAANPYWLAFALLITSLRSLNLKID*TGP 4
>gb|BQ656750.1|BQ656750 HA02F05u HA Hordeum vulgare subsp. vulgare cDNA clone HA02F05
3-PRIME, mRNA sequence
Length = 549
Score = 149 bits (319), Expect = 2e-035
Identities = 55/99 (55%), Positives = 78/99 (78%)
Frame = -2 / -1
Query: 590 GPVMSLMKFKTVDEVIEKANCTRYGLAAGIVTKSLDVANRVSRSVRAGTVWVNCYFAFDP 411
GPV S+ KF ++EVI++AN ++YGLAAG+ T +LD AN ++R++RAGT+WVNC+ FD
Sbjct: 549 GPVQSIFKFNDLNEVIKRANASQYGLAAGVFTNNLDTANTLTRALRAGTIWVNCFDIFDA 370
Query: 410 DAPFGGYKMSGFGRDQGLAAMDKYLQVKSVITALPDSPW 294
PFGGYKMSG GR++G+ ++ YLQVK+V+TAL + W
Sbjct: 369 AIPFGGYKMSGIGREKGIDSLKNYLQVKAVVTALKNPAW 253
>gb|CA027624.1|CA027624 HZ59I04r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ59I04
5-PRIME, mRNA sequence
Length = 374
Score = 149 bits (319), Expect = 2e-035
Identities = 55/99 (55%), Positives = 78/99 (78%)
Frame = -2 / -1
Query: 590 GPVMSLMKFKTVDEVIEKANCTRYGLAAGIVTKSLDVANRVSRSVRAGTVWVNCYFAFDP 411
GPV S+ KF ++EVI++AN ++YGLAAG+ T +LD AN ++R++RAGT+WVNC+ FD
Sbjct: 374 GPVQSIFKFNDLNEVIKRANASQYGLAAGVFTNNLDTANTLTRALRAGTIWVNCFDIFDA 195
Query: 410 DAPFGGYKMSGFGRDQGLAAMDKYLQVKSVITALPDSPW 294
PFGGYKMSG GR++G+ ++ YLQVK+V+TAL + W
Sbjct: 194 AIPFGGYKMSGIGREKGIDSLKNYLQVKAVVTALKNPAW 78
>gb|CA018967.1|CA018967 HV10E09r HV Hordeum vulgare subsp. vulgare cDNA clone HV10E09
5-PRIME, mRNA sequence
Length = 298
Score = 147 bits (316), Expect = 4e-035
Identities = 55/95 (57%), Positives = 77/95 (81%)
Frame = -2 / +1
Query: 596 IFGPVMSLMKFKTVDEVIEKANCTRYGLAAGIVTKSLDVANRVSRSVRAGTVWVNCYFAF 417
IFGPV S+ KF ++EVI++AN ++YGLAAG+ T +LD AN ++R++RAGT+WVNC+ F
Sbjct: 13 IFGPVQSIFKFNDLNEVIKRANASQYGLAAGVFTNNLDTANTLTRALRAGTIWVNCFDIF 192
Query: 416 DPDAPFGGYKMSGFGRDQGLAAMDKYLQVKSVITA 312
D PFGGYKMSG GR++G+ ++ YLQVK+V+TA
Sbjct: 193 DAAIPFGGYKMSGIGREKGIDSLKNYLQVKAVVTA 297
Score = 101 bits (215), Expect = 4e-021
Identities = 51/95 (53%), Positives = 56/95 (58%)
Frame = +1 / -3
Query: 313 AVMTLLTCRYLSMAASPWSRPKPLILYPPKGASGSKAK*QFTHTVPARTDRDTRLATSRL 492
AV T LTCR + P+S P PLILYPPKG + SK QFT VPA R LA SRL
Sbjct: 296 AVTTALTCR*FFRLSMPFSLPMPLILYPPKGIAASKMSKQFTQIVPALRARVKVLAVSRL 117
Query: 493 LVTIPAASPYLVQLAFSITSSTVLNFMRDMTGPKI 597
LV PAA+PY + A ITS LN D TGP I
Sbjct: 116 LVKTPAANPYWLAFALLITSLRSLNLKID*TGPNI 12
>gb|BJ546487.1|BJ546487 BJ546487 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak42a08 3', mRNA sequence
Length = 557
Score = 146 bits (313), Expect = 1e-034
Identities = 54/98 (55%), Positives = 77/98 (78%)
Frame = -2 / -2
Query: 587 PVMSLMKFKTVDEVIEKANCTRYGLAAGIVTKSLDVANRVSRSVRAGTVWVNCYFAFDPD 408
PV S+ KF ++EVI++AN ++YGLAAG+ T +LD AN ++R++RAGT+WVNC+ FD
Sbjct: 556 PVQSIFKFNDLNEVIKRANASQYGLAAGVFTNNLDTANTLTRALRAGTIWVNCFDIFDAA 377
Query: 407 APFGGYKMSGFGRDQGLAAMDKYLQVKSVITALPDSPW 294
PFGGYKMSG GR++G+ ++ YLQVK+V+TAL + W
Sbjct: 376 IPFGGYKMSGIGREKGIDSLKNYLQVKAVVTALKNPAW 263
>gb|BJ546503.1|BJ546503 BJ546503 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak42e14 3', mRNA sequence
Length = 530
Score = 146 bits (313), Expect = 1e-034
Identities = 54/98 (55%), Positives = 77/98 (78%)
Frame = -2 / -1
Query: 587 PVMSLMKFKTVDEVIEKANCTRYGLAAGIVTKSLDVANRVSRSVRAGTVWVNCYFAFDPD 408
PV S+ KF ++EVI++AN ++YGLAAG+ T +LD AN ++R++RAGT+WVNC+ FD
Sbjct: 530 PVQSIFKFNDLNEVIKRANASQYGLAAGVFTNNLDTANTLTRALRAGTIWVNCFDIFDAA 351
Query: 407 APFGGYKMSGFGRDQGLAAMDKYLQVKSVITALPDSPW 294
PFGGYKMSG GR++G+ ++ YLQVK+V+TAL + W
Sbjct: 350 IPFGGYKMSGIGREKGIDSLKNYLQVKAVVTALKNPAW 237
>gb|BF253896.2|BF253896 HVSMEf0002G19f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0002G19f, mRNA sequence
Length = 844
Score = 137 bits (293), Expect(2) = 5e-033
Identities = 55/68 (80%), Positives = 61/68 (89%)
Frame = -2 / +3
Query: 596 IFGPVMSLMKFKTVDEVIEKANCTRYGLAAGIVTKSLDVANRVSRSVRAGTVWVNCYFAF 417
IFGPVMSLMKFKTVDE IEKANCT+YGLA GI+TK+LD+AN+VSRSVRA TV VNCYFA
Sbjct: 534 IFGPVMSLMKFKTVDEAIEKANCTKYGLAXGIITKNLDIANKVSRSVRAXTVXVNCYFAL 713
Query: 416 DPDAPFGG 393
DP+AP G
Sbjct: 714 DPEAPSAG 737
Score = 122 bits (260), Expect(2) = 3e-028
Identities = 55/70 (78%), Positives = 59/70 (84%)
Frame = +1 / -1
Query: 388 LYPPKGASGSKAK*QFTHTVPARTDRDTRLATSRLLVTIPAASPYLVQLAFSITSSTVLN 567
L P +GASGS+AK*QFT TV ARTD DT LA S+ LV IP ASPYLVQLAFSI SSTVLN
Sbjct: 742 LVPAEGASGSRAK*QFTXTVXARTDLDTLLAMSKFLVMIPXASPYLVQLAFSIASSTVLN 563
Query: 568 FMRDMTGPKI 597
FMRD+TGPKI
Sbjct: 562 FMRDITGPKI 533
Score = 23.5 bits (45), Expect(2) = 5e-033
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -1 / +3
Query: 384 ERLRPGPG 361
ERLRPGPG
Sbjct: 744 ERLRPGPG 767
Score = 22.6 bits (43), Expect(2) = 3e-028
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +1 / -3
Query: 364 WSRPKPL 384
WSRPKPL
Sbjct: 764 WSRPKPL 744
>gb|BG300455.1|BG300455 HVSMEb0017B23f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0017B23f, mRNA sequence
Length = 853
Score = 135 bits (289), Expect = 2e-031
Identities = 51/101 (50%), Positives = 75/101 (74%)
Frame = -2 / +3
Query: 596 IFGPVMSLMKFKTVDEVIEKANCTRYGLAAGIVTKSLDVANRVSRSVRAGTVWVNCYFAF 417
IFGPV + ++ + EVI +AN ++YGLAAG+ T +LD AN ++R+++AGT+WVNC+ F
Sbjct: 18 IFGPVH*IFQYYDLYEVINRANASQYGLAAGVFTNNLDTANTLTRALKAGTIWVNCFDIF 197
Query: 416 DPDAPFGGYKMSGFGRDQGLAAMDKYLQVKSVITALPDSPW 294
+ PFGGYKMSG GR++G+ ++ YLQVK+V T L + W
Sbjct: 198 NAAIPFGGYKMSGLGREKGIDSLKNYLQVKAVFTVLNNPAW 320
>gb|BI949913.1|BI949913 HVSMEl0016O20f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0016O20f, mRNA sequence
Length = 440
Score = 134 bits (288), Expect = 3e-031
Identities = 51/91 (56%), Positives = 71/91 (78%)
Frame = -2 / +3
Query: 596 IFGPVMSLMKFKTVDEVIEKANCTRYGLAAGIVTKSLDVANRVSRSVRAGTVWVNCYFAF 417
IFGPV S+ KF ++EVI++AN ++YGLAAG+ T +LD AN ++R++RAGT+WVNC+ F
Sbjct: 168 IFGPVQSIFKFNDLNEVIKRANASQYGLAAGVFTNNLDTANTLTRALRAGTIWVNCFDMF 347
Query: 416 DPDAPFGGYKMSGFGRDQGLAAMDKYLQVKS 324
+ PFGGYKM G GRD+G ++ YLQVK+
Sbjct: 348 NAAIPFGGYKMIGIGRDKGNHSLKNYLQVKA 440
>gb|BF267588.2|BF267588 HV_CEa0018F16f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0018F16f, mRNA sequence
Length = 808
Score = 89.0 bits (188), Expect(2) = 4e-031
Identities = 32/57 (56%), Positives = 44/57 (77%)
Frame = -2 / +3
Query: 461 SVRAGTVWVNCYFAFDPDAPFGGYKMSGFGRDQGLAAMDKYLQVKSVITALPDSPWY 291
++RAGT+WVNC+ FD PFGGYKMSG GR++G+ ++ YLQVK+V TAL + W+
Sbjct: 387 ALRAGTIWVNCFDIFDAAIPFGGYKMSGIGREKGIHSLKNYLQVKAVRTALKNPAWF 557
Score = 65.2 bits (136), Expect(2) = 4e-031
Identities = 25/45 (55%), Positives = 35/45 (77%)
Frame = -2 / +2
Query: 596 IFGPVMSLMKFKTVDEVIEKANCTRYGLAAGIVTKSLDVANRVSR 462
IFGPV S+ KF ++EVI++AN +YGLAAG+ T +LD AN ++R
Sbjct: 251 IFGPVQSIFKFNDLNEVIKRANACQYGLAAGVFTNNLDTANTLTR 385
>gb|BJ549890.1|BJ549890 BJ549890 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags35f16 3', mRNA sequence
Length = 480
Score = 121 bits (258), Expect = 4e-027
Identities = 44/78 (56%), Positives = 62/78 (79%)
Frame = -2 / -2
Query: 527 TRYGLAAGIVTKSLDVANRVSRSVRAGTVWVNCYFAFDPDAPFGGYKMSGFGRDQGLAAM 348
++YGLAAG+ T +LD AN ++R++RAGT+WVNC+ FD PFGGYKMSG GR++G+ ++
Sbjct: 479 SQYGLAAGVFTNNLDTANTLTRALRAGTIWVNCFDIFDAAIPFGGYKMSGIGREKGIDSL 300
Query: 347 DKYLQVKSVITALPDSPW 294
YLQVK+V+TAL + W
Sbjct: 299 KNYLQVKAVVTALKNPAW 246
>gb|AV913129.1|AV913129 AV913129 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags11p17 5', mRNA sequence
Length = 552
Score = 120 bits (256), Expect = 8e-027
Identities = 47/60 (78%), Positives = 55/60 (91%)
Frame = -2 / +3
Query: 596 IFGPVMSLMKFKTVDEVIEKANCTRYGLAAGIVTKSLDVANRVSRSVRAGTVWVNCYFAF 417
IFGPVM+LMKFKT++EVI+KAN TRYGLAAG+VTK++D N VSRSVR+G VWVNCYFAF
Sbjct: 372 IFGPVMALMKFKTMEEVIQKANSTRYGLAAGVVTKNIDTMNTVSRSVRSGVVWVNCYFAF 551
>gb|BM377612.2|BM377612 EBem04_SQ003_K14_R embryo, 12 DPA, no treatment, cv Optic, EBem04
Hordeum vulgare subsp. vulgare cDNA clone
EBem04_SQ003_K14 5', mRNA sequence
Length = 510
Score = 109 bits (232), Expect = 2e-023
Identities = 43/101 (42%), Positives = 60/101 (59%)
Frame = -2 / +3
Query: 596 IFGPVMSLMKFKTVDEVIEKANCTRYGLAAGIVTKSLDVANRVSRSVRAGTVWVNCYFAF 417
+FGPV+ + +F T +E IE AN T YGLA +++ + R+S + AG +WVNC
Sbjct: 39 VFGPVLCVKEFSTEEEAIELANDTHYGLAGAVISGDRERCQRLSEEIEAGCIWVNCSQPC 218
Query: 416 DPDAPFGGYKMSGFGRDQGLAAMDKYLQVKSVITALPDSPW 294
AP+GG K SGFGR+ G +D YL +K V D+PW
Sbjct: 219 FCQAPWGGNKRSGFGRELGEGGIDNYLSIKQVTEYTSDAPW 341
>gb|BM371740.2|BM371740 EBma08_SQ003_M14_R maternal, 28 DPA, no treatment, cv Optic, EBma08
Hordeum vulgare subsp. vulgare cDNA clone
EBma08_SQ003_M14 5', mRNA sequence
Length = 482
Score = 109 bits (232), Expect = 2e-023
Identities = 43/101 (42%), Positives = 60/101 (59%)
Frame = -2 / +2
Query: 596 IFGPVMSLMKFKTVDEVIEKANCTRYGLAAGIVTKSLDVANRVSRSVRAGTVWVNCYFAF 417
+FGPV+ + +F T +E IE AN T YGLA +++ + R+S + AG +WVNC
Sbjct: 179 VFGPVLCVKEFSTEEEAIELANDTHYGLAGAVISGDRERCQRLSEEIEAGCIWVNCSQPC 358
Query: 416 DPDAPFGGYKMSGFGRDQGLAAMDKYLQVKSVITALPDSPW 294
AP+GG K SGFGR+ G +D YL +K V D+PW
Sbjct: 359 FCQAPWGGNKRSGFGRELGEGGIDNYLSIKQVTEYTSDAPW 481
>gb|AV832590.1|AV832590 AV832590 K. Sato unpublished cDNA library: Hordeum vulgare subsp.
vulgare leaves vegetative stage Hordeum vulgare subsp.
vulgare cDNA clone baak1n06, mRNA sequence
Length = 674
Score = 107 bits (229), Expect = 4e-023
Identities = 42/101 (41%), Positives = 60/101 (59%)
Frame = -2 / -2
Query: 596 IFGPVMSLMKFKTVDEVIEKANCTRYGLAAGIVTKSLDVANRVSRSVRAGTVWVNCYFAF 417
+FGPV+ + +F T +E IE AN T YGLA +++ + R++ + AG +WVNC
Sbjct: 613 VFGPVLCVKEFSTEEEAIELANDTHYGLAGAVISGDSERCQRLAEEIEAGCIWVNCSQPC 434
Query: 416 DPDAPFGGYKMSGFGRDQGLAAMDKYLQVKSVITALPDSPW 294
AP+GG K SGFGR+ G +D YL +K V D+PW
Sbjct: 433 FCQAPWGGNKRSGFGRELGEGGIDNYLSIKQVTEYTSDAPW 311
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 268,899,130
Number of Sequences: 312970
Number of extensions: 4488479
Number of successful extensions: 71681
Number of sequences better than 1.0e-020: 92
length of database: 58,378,179
effective HSP length: 51
effective length of database: 42,416,709
effective search space used: 6235256223
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)