TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3071103.2.1
(570 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BG301220.2|BG301220 HVSMEb0019P18f Hordeum vulgare seedl... 199 3e-081
gb|U02287.1|HVU02287 Hordeum vulgare cultivar NK1558 chitin... 181 1e-073
gb|BQ466147.1|BQ466147 HT01L11T HT Hordeum vulgare subsp. v... 181 1e-073
gb|CA013166.1|CA013166 HT07J12r HT Hordeum vulgare subsp. v... 181 1e-073
gb|CA013604.1|CA013604 HT08P16r HT Hordeum vulgare subsp. v... 181 1e-073
emb|X15349.1|HVENDCHT Barley (H.vulgare) mRNA for endochiti... 181 1e-073
gb|BG415203.1|BG415203 HVSMEk0005I16f Hordeum vulgare testa... 177 2e-072
gb|BI780034.2|BI780034 EBma08_SQ001_D14_R maternal, 28 DPA,... 177 2e-072
gb|BQ465942.1|BQ465942 HT01C02T HT Hordeum vulgare subsp. v... 177 2e-072
gb|BQ466541.1|BQ466541 HT02N08r HT Hordeum vulgare subsp. v... 177 2e-072
gb|BG414755.1|BG414755 HVSMEk0003J19f Hordeum vulgare testa... 175 4e-072
gb|BE454492.3|BE454492 HVSMEh0094A02f Hordeum vulgare 5-45 ... 177 1e-071
gb|BQ465191.1|BQ465191 HU02O12r HU Hordeum vulgare subsp. v... 174 1e-071
gb|BQ755807.1|BQ755807 EBed07_SQ003_N15_R endosperm, 28 DPA... 177 2e-071
gb|CA022080.1|CA022080 HZ42B20r HZ Hordeum vulgare subsp. v... 177 4e-071
gb|BE454845.1|BE454845 HVSMEh0095E05f Hordeum vulgare 5-45 ... 171 1e-070
gb|BG417971.1|BG417971 HVSMEk0020F20f Hordeum vulgare testa... 168 5e-070
gb|AV926193.1|AV926193 AV926193 K. Sato unpublished cDNA li... 177 2e-069
gb|BG365157.2|BG365157 HVSMEi0001I15f Hordeum vulgare 20 DA... 174 5e-069
gb|AV926184.1|AV926184 AV926184 K. Sato unpublished cDNA li... 177 5e-069
gb|BI949025.1|BI949025 HVSMEl0012B07f Hordeum vulgare spike... 171 2e-068
gb|BE602548.3|BE602548 HVSMEh0099N16f Hordeum vulgare 5-45 ... 178 4e-068
gb|BQ663496.1|BQ663496 HU02O12u HU Hordeum vulgare subsp. v... 158 1e-066
gb|CA016825.1|CA016825 HV05P04u HV Hordeum vulgare subsp. v... 158 1e-066
gb|BG365536.1|BG365536 HVSMEi0003B22f Hordeum vulgare 20 DA... 177 2e-066
gb|BG417744.1|BG417744 HVSMEk0019F09f Hordeum vulgare testa... 171 7e-066
gb|AV931065.1|AV931065 AV931065 K. Sato unpublished cDNA li... 149 2e-064
gb|CA012187.1|CA012187 HT04K16r HT Hordeum vulgare subsp. v... 177 2e-063
gb|BM096890.2|BM096890 EBma08_SQ001_O17_R maternal, 28 DPA,... 142 5e-062
gb|BG369358.2|BG369358 HVSMEi0024B14f Hordeum vulgare 20 DA... 177 2e-061
gb|BM371442.2|BM371442 EBma08_SQ002_M02_R maternal, 28 DPA,... 139 3e-061
gb|CB876675.1|CB876675 HP02A05T HP Hordeum vulgare subsp. v... 182 1e-060
gb|AV935813.1|AV935813 AV935813 K. Sato unpublished cDNA li... 126 2e-057
gb|BJ476805.1|BJ476805 BJ476805 K. Sato unpublished cDNA li... 126 2e-057
gb|CA012210.1|CA012210 HT04M11r HT Hordeum vulgare subsp. v... 181 3e-057
gb|AV935770.1|AV935770 AV935770 K. Sato unpublished cDNA li... 122 1e-056
gb|AV933371.1|AV933371 AV933371 K. Sato unpublished cDNA li... 122 1e-056
gb|CD663592.1|CD663592 UCRHV18_06aa04_b1 Drought-stressed D... 122 1e-056
gb|BJ469713.1|BJ469713 BJ469713 K. Sato unpublished cDNA li... 122 1e-056
gb|CB879385.1|CB879385 HP02A05w HP Hordeum vulgare subsp. v... 122 2e-056
gb|BI948372.1|BI948372 HVSMEl0009E13f Hordeum vulgare spike... 128 7e-056
gb|CA010697.1|CA010697 HT08P16u HT Hordeum vulgare subsp. v... 116 4e-054
gb|BG368852.1|BG368852 HVSMEi0020P03f Hordeum vulgare 20 DA... 180 5e-053
gb|CB879697.1|CB879697 HP03F07w HP Hordeum vulgare subsp. v... 116 5e-053
gb|BG368854.1|BG368854 HVSMEi0020P07f Hordeum vulgare 20 DA... 178 1e-052
gb|BI946904.1|BI946904 HVSMEl0002L21f Hordeum vulgare spike... 179 2e-052
gb|CA026694.1|CA026694 HZ56K16r HZ Hordeum vulgare subsp. v... 140 9e-052
gb|BJ449472.1|BJ449472 BJ449472 K. Sato unpublished cDNA li... 114 1e-051
gb|BJ459432.1|BJ459432 BJ459432 K. Sato unpublished cDNA li... 114 1e-051
gb|BG416746.1|BG416746 HVSMEk0014F08f Hordeum vulgare testa... 177 3e-050
gb|BG365634.2|BG365634 HVSMEi0003I02f Hordeum vulgare 20 DA... 177 4e-050
gb|CB858429.1|CB858429 HI06P17w HI Hordeum vulgare subsp. v... 116 7e-050
gb|BJ451756.1|BJ451756 BJ451756 K. Sato unpublished cDNA li... 118 1e-049
gb|BJ459252.1|BJ459252 BJ459252 K. Sato unpublished cDNA li... 118 1e-049
gb|BE454366.3|BE454366 HVSMEh0093N17f Hordeum vulgare 5-45 ... 160 1e-048
gb|CB877034.1|CB877034 HP03F07T HP Hordeum vulgare subsp. v... 126 2e-048
gb|BU984341.1|BU984341 HF03K16r HF Hordeum vulgare subsp. v... 115 2e-048
gb|BE411672.1|BE411672 ISC008.A09F990802 ITEC ISC Barley Le... 120 5e-047
gb|BI947731.1|BI947731 HVSMEl0006K11f Hordeum vulgare spike... 163 3e-046
gb|AV931076.1|AV931076 AV931076 K. Sato unpublished cDNA li... 116 4e-046
gb|BG414551.2|BG414551 HVSMEk0002N14f Hordeum vulgare testa... 177 9e-046
gb|CA018162.1|CA018162 HV07L16r HV Hordeum vulgare subsp. v... 182 2e-045
gb|BI949464.1|BI949464 HVSMEl0014A17f Hordeum vulgare spike... 181 3e-045
gb|BM372933.2|BM372933 EBma04_SQ002_H02_R maternal, 10 DPA,... 177 8e-045
gb|CA013184.1|CA013184 HT07K10r HT Hordeum vulgare subsp. v... 115 2e-044
gb|AV926194.1|AV926194 AV926194 K. Sato unpublished cDNA li... 177 3e-044
gb|BM441867.2|BM441867 EBed07_SQ001_M10_R endosperm, 28 DPA... 177 6e-044
gb|BM371924.2|BM371924 EBma08_SQ004_G15_R maternal, 28 DPA,... 177 6e-044
gb|CA014196.1|CA014196 HT10K16r HT Hordeum vulgare subsp. v... 177 6e-044
gb|AV933383.1|AV933383 AV933383 K. Sato unpublished cDNA li... 110 8e-044
gb|AV928645.1|AV928645 AV928645 K. Sato unpublished cDNA li... 114 1e-043
gb|CA022259.1|CA022259 HZ42J20r HZ Hordeum vulgare subsp. v... 108 1e-043
gb|CA017694.1|CA017694 HV05P04r HV Hordeum vulgare subsp. v... 176 1e-043
emb|AJ276226.1|HVU276226 Hordeum vulgare mRNA for chitinase... 113 1e-043
gb|BI952125.1|BI952125 HVSMEm0004L07f Hordeum vulgare green... 113 1e-043
gb|BJ546437.1|BJ546437 BJ546437 K. Sato unpublished cDNA li... 113 1e-043
gb|BJ546657.1|BJ546657 BJ546657 K. Sato unpublished cDNA li... 113 1e-043
gb|BE214483.2|BE214483 HV_CEb0003J11f Hordeum vulgare seedl... 113 1e-043
gb|AV911582.1|AV911582 AV911582 K. Sato unpublished cDNA li... 113 1e-043
gb|BJ544721.1|BJ544721 BJ544721 K. Sato unpublished cDNA li... 113 1e-043
gb|BJ546197.1|BJ546197 BJ546197 K. Sato unpublished cDNA li... 113 1e-043
gb|BJ546165.1|BJ546165 BJ546165 K. Sato unpublished cDNA li... 113 1e-043
gb|BJ545740.1|BJ545740 BJ545740 K. Sato unpublished cDNA li... 113 2e-043
gb|BJ546246.1|BJ546246 BJ546246 K. Sato unpublished cDNA li... 113 2e-043
gb|BJ546018.1|BJ546018 BJ546018 K. Sato unpublished cDNA li... 113 2e-043
emb|X78672.1|HVCHT2B H.vulgare mRNA for chitinase 2b 111 5e-043
gb|BM371550.2|BM371550 EBma08_SQ003_C16_R maternal, 28 DPA,... 173 6e-043
gb|BJ544774.1|BJ544774 BJ544774 K. Sato unpublished cDNA li... 113 9e-043
emb|X78671.1|HVCHT2A H.vulgare mRNA for chitinase 2a 110 2e-042
gb|BF065067.1|BF065067 HV_CEb0022N01f Hordeum vulgare seedl... 110 2e-042
gb|AV929266.1|AV929266 AV929266 K. Sato unpublished cDNA li... 113 2e-042
gb|BJ456780.1|BJ456780 BJ456780 K. Sato unpublished cDNA li... 110 2e-042
gb|AV908961.1|AV908961 AV908961 K. Sato unpublished cDNA li... 110 2e-042
gb|BJ449314.1|BJ449314 BJ449314 K. Sato unpublished cDNA li... 110 2e-042
gb|BG369588.2|BG369588 HVSMEi0025B12f Hordeum vulgare 20 DA... 171 2e-042
gb|AV910846.1|AV910846 AV910846 K. Sato unpublished cDNA li... 109 2e-042
gb|BE422349.1|BE422349 HWM023cB.11r ITEC HWM Barley Leaf Li... 116 3e-042
gb|BF064981.3|BF064981 HV_CEb0022E17f Hordeum vulgare seedl... 171 4e-042
gb|BE455238.3|BE455238 HVSMEh0096L08f Hordeum vulgare 5-45 ... 170 7e-042
gb|CA013444.1|CA013444 HT08H14r HT Hordeum vulgare subsp. v... 115 2e-041
gb|AV935825.1|AV935825 AV935825 K. Sato unpublished cDNA li... 116 2e-041
gb|BU988906.1|BU988906 HF19B23r HF Hordeum vulgare subsp. v... 115 2e-041
gb|BE214283.1|BE214283 HV_CEb0003A01f Hordeum vulgare seedl... 110 4e-041
gb|BF264498.2|BF264498 HV_CEa0009J09f Hordeum vulgare seedl... 110 6e-041
gb|BE195244.3|BE195244 HVSMEh0088K24f Hordeum vulgare 5-45 ... 164 8e-041
gb|BG418257.2|BG418257 HVSMEk0022B19f Hordeum vulgare testa... 115 2e-040
gb|BE411224.1|BE411224 ISC003.D02F990524 ITEC ISC Barley Le... 164 3e-040
gb|BG365326.1|BG365326 HVSMEi0002E22f Hordeum vulgare 20 DA... 162 1e-039
gb|BG366386.2|BG366386 HVSMEi0006N24f Hordeum vulgare 20 DA... 153 2e-039
gb|BQ659497.1|BQ659497 HE01J14u HE Hordeum vulgare subsp. v... 116 9e-039
gb|BJ544954.1|BJ544954 BJ544954 K. Sato unpublished cDNA li... 113 2e-038
gb|CA016532.1|CA016532 HV08G01u HV Hordeum vulgare subsp. v... 114 3e-038
gb|AV909683.1|AV909683 AV909683 K. Sato unpublished cDNA li... 82 3e-038
gb|AL450510.1|AL450510 AL450510 Hordeum vulgare Barke etiol... 114 5e-037
gb|BG366294.2|BG366294 HVSMEi0006J18f Hordeum vulgare 20 DA... 120 7e-037
gb|BF259671.3|BF259671 HVSMEf0019P07f Hordeum vulgare seedl... 91 1e-036
gb|BG365857.2|BG365857 HVSMEi0004I09f Hordeum vulgare 20 DA... 152 1e-036
gb|BF064990.1|BF064990 HV_CEb0022F13f Hordeum vulgare seedl... 113 1e-036
gb|BI947511.1|BI947511 HVSMEl0005L16f Hordeum vulgare spike... 108 2e-036
gb|CA014232.1|CA014232 HT10M05r HT Hordeum vulgare subsp. v... 115 2e-036
gb|BE602137.3|BE602137 HVSMEh0102K15f Hordeum vulgare 5-45 ... 151 2e-036
gb|BF065825.3|BF065825 HV_CEb0014B14f Hordeum vulgare seedl... 110 3e-036
gb|BI780179.2|BI780179 EBma08_SQ001_K01_R maternal, 28 DPA,... 147 4e-035
gb|BG365887.1|BG365887 HVSMEi0004K07f Hordeum vulgare 20 DA... 145 1e-034
gb|BJ543978.1|BJ543978 BJ543978 K. Sato unpublished cDNA li... 113 1e-034
gb|BJ544300.1|BJ544300 BJ544300 K. Sato unpublished cDNA li... 113 2e-034
gb|CA019539.1|CA019539 HV12E21r HV Hordeum vulgare subsp. v... 144 3e-034
gb|BE602672.2|BE602672 HVSMEh0101A21f Hordeum vulgare 5-45 ... 97 9e-033
gb|BE559148.1|BE559148 HV_CEb0023K15f Hordeum vulgare seedl... 108 1e-032
gb|BE195290.2|BE195290 HVSMEh0088N04f Hordeum vulgare 5-45 ... 139 1e-032
gb|BI951167.1|BI951167 HVSMEl0024N04f Hordeum vulgare spike... 137 4e-032
gb|BI955596.1|BI955596 HVSMEm0023L14f Hordeum vulgare green... 106 8e-032
gb|BG365754.2|BG365754 HVSMEi0004B04f Hordeum vulgare 20 DA... 93 1e-031
gb|BJ545180.1|BJ545180 BJ545180 K. Sato unpublished cDNA li... 113 7e-031
gb|AL499683.1|AL499683 AL499683 Hordeum vulgare Barke etiol... 129 2e-030
gb|BJ447651.1|BJ447651 BJ447651 K. Sato unpublished cDNA li... 103 3e-030
gb|BJ455403.1|BJ455403 BJ455403 K. Sato unpublished cDNA li... 103 3e-030
gb|BF264615.1|BF264615 HV_CEa0009O11f Hordeum vulgare seedl... 112 9e-030
gb|BG365987.1|BG365987 HVSMEi0005K09f Hordeum vulgare 20 DA... 129 1e-029
gb|BJ544278.1|BJ544278 BJ544278 K. Sato unpublished cDNA li... 113 1e-029
gb|BJ458244.1|BJ458244 BJ458244 K. Sato unpublished cDNA li... 113 2e-029
gb|BJ458220.1|BJ458220 BJ458220 K. Sato unpublished cDNA li... 113 2e-029
gb|BF263615.1|BF263615 HV_CEa0007D10f Hordeum vulgare seedl... 100 3e-029
gb|AV931601.1|AV931601 AV931601 K. Sato unpublished cDNA li... 113 4e-029
gb|BF065694.2|BF065694 HV_CEb0013H08f Hordeum vulgare seedl... 111 6e-029
gb|AL502023.1|AL502023 AL502023 Hordeum vulgare Barke roots... 101 6e-029
gb|BQ768408.1|BQ768408 EBro08_SQ011_K13_R root, 3 week, dro... 115 6e-029
gb|BQ662085.1|BQ662085 HR01H21u HR Hordeum vulgare subsp. v... 124 4e-028
gb|CA014966.1|CA014966 HT12N24r HT Hordeum vulgare subsp. v... 124 4e-028
gb|BE559387.2|BE559387 HV_CEb0024H02f Hordeum vulgare seedl... 70 5e-028
gb|BM371530.2|BM371530 EBma08_SQ003_B11_R maternal, 28 DPA,... 123 8e-028
gb|BE214577.2|BE214577 HV_CEb0003N19f Hordeum vulgare seedl... 106 1e-027
gb|BJ546257.1|BJ546257 BJ546257 K. Sato unpublished cDNA li... 82 1e-027
gb|BM441893.2|BM441893 EBed07_SQ001_N14_R endosperm, 28 DPA... 111 2e-027
gb|CA009849.1|CA009849 HT12N24u HT Hordeum vulgare subsp. v... 100 5e-027
gb|BF260800.3|BF260800 HVSMEf0022P16f Hordeum vulgare seedl... 110 4e-026
gb|BF265478.2|BF265478 HV_CEa0012G06f Hordeum vulgare seedl... 89 6e-026
gb|BE421938.1|BE421938 HWM016cG.08r ITEC HWM Barley Leaf Li... 116 1e-025
gb|AV910172.1|AV910172 AV910172 K. Sato unpublished cDNA li... 116 1e-025
gb|BQ660441.1|BQ660441 HI02J08u HI Hordeum vulgare subsp. v... 116 1e-025
gb|CA013940.1|CA013940 HT09O20r HT Hordeum vulgare subsp. v... 116 1e-025
gb|CB877320.1|CB877320 HP04G13T HP Hordeum vulgare subsp. v... 116 1e-025
gb|BJ449474.1|BJ449474 BJ449474 K. Sato unpublished cDNA li... 116 1e-025
gb|BJ458576.1|BJ458576 BJ458576 K. Sato unpublished cDNA li... 116 1e-025
gb|BM444668.1|BM444668 EBem09_SQ006_C06_R embryo, 1 Day ger... 116 1e-025
gb|BI947647.1|BI947647 HVSMEl0006E07f Hordeum vulgare spike... 115 3e-025
gb|BG415997.2|BG415997 HVSMEk0009F15f Hordeum vulgare testa... 115 3e-025
gb|BJ451072.1|BJ451072 BJ451072 K. Sato unpublished cDNA li... 113 7e-025
gb|CA031549.1|CA031549 HX10F18r HX Hordeum vulgare subsp. v... 113 7e-025
gb|BJ544690.1|BJ544690 BJ544690 K. Sato unpublished cDNA li... 113 7e-025
gb|BG367616.2|BG367616 HVSMEi0012P08f Hordeum vulgare 20 DA... 111 2e-024
gb|BF628657.2|BF628657 HVSMEb0006P01f Hordeum vulgare seedl... 102 2e-024
gb|BI951414.1|BI951414 HVSMEl0025N19f Hordeum vulgare spike... 110 8e-024
gb|BI780166.2|BI780166 EBma08_SQ001_J11_R maternal, 28 DPA,... 110 8e-024
gb|AL500402.1|AL500402 AL500402 Hordeum vulgare Barke etiol... 99 9e-024
gb|BQ758640.1|BQ758640 EBma07_SQ002_J07_R maternal, 21 DPA,... 87 9e-024
gb|CA015968.1|CA015968 HV10J02u HV Hordeum vulgare subsp. v... 109 1e-023
gb|BG368439.1|BG368439 HVSMEi0018M10f Hordeum vulgare 20 DA... 109 2e-023
gb|AV933330.1|AV933330 AV933330 K. Sato unpublished cDNA li... 108 2e-023
gb|CD662737.1|CD662737 UCRHV18_02dh04_b1 Drought-stressed D... 84 1e-022
gb|CB878161.1|CB878161 HP07J01T HP Hordeum vulgare subsp. v... 105 2e-022
gb|CB876220.1|CB876220 HX10K07w HX Hordeum vulgare subsp. v... 91 2e-022
gb|BI953201.1|BI953201 HVSMEm0011K01f Hordeum vulgare green... 97 7e-022
gb|CA015187.1|CA015187 HT13I21r HT Hordeum vulgare subsp. v... 103 1e-021
gb|BG365564.2|BG365564 HVSMEi0003D14f Hordeum vulgare 20 DA... 102 1e-021
gb|BG368641.2|BG368641 HVSMEi0020B02f Hordeum vulgare 20 DA... 102 2e-021
gb|BG367460.1|BG367460 HVSMEi0012F13f Hordeum vulgare 20 DA... 101 3e-021
gb|BM097251.1|BM097251 EBpi07_SQ002_O02_R pistil, 12 DPA, n... 101 3e-021
gb|BF066058.1|BF066058 HV_CEb0014L16f Hordeum vulgare seedl... 90 3e-021
gb|BF624096.2|BF624096 HVSMEa0009G20f Hordeum vulgare seedl... 68 3e-021
gb|BE216024.1|BE216024 HV_CEb0009C12f Hordeum vulgare seedl... 101 3e-021
gb|BI955638.1|BI955638 HVSMEm0023N21f Hordeum vulgare green... 100 5e-021
gb|BJ464879.1|BJ464879 BJ464879 K. Sato unpublished cDNA li... 74 6e-021
gb|BU986660.1|BU986660 HF12I18r HF Hordeum vulgare subsp. v... 74 6e-021
gb|BU986619.1|BU986619 HF12G18r HF Hordeum vulgare subsp. v... 74 6e-021
gb|CB879149.1|CB879149 HP11B19T HP Hordeum vulgare subsp. v... 100 9e-021
>gb|BG301220.2|BG301220 HVSMEb0019P18f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0019P18f, mRNA sequence
Length = 713
Score = 199 bits (430), Expect(2) = 3e-081
Identities = 70/87 (80%), Positives = 82/87 (94%)
Frame = -2 / +1
Query: 569 RNPPSDYCEPRPQWPCAPGKKYFGRGPIQISFNYNYGPAGRAIGVDLLNNPDLVATDPVI 390
R+PPSDYCEPRP+WPCAPG++Y+GRGP+Q+SFNYNYGPAGRA+GVDLL+NPDLVATDPV+
Sbjct: 34 RDPPSDYCEPRPEWPCAPGRRYYGRGPMQLSFNYNYGPAGRALGVDLLSNPDLVATDPVL 213
Query: 389 SFKTALWFWMNARDNKPSCHAVITGQW 309
SFKTALWFWM + NKPS HAVI G+W
Sbjct: 214 SFKTALWFWMTPQANKPSSHAVIAGRW 294
Score = 172 bits (370), Expect = 1e-042
Identities = 80/112 (71%), Positives = 85/112 (75%)
Frame = +1 / -1
Query: 235 PLMMLVITPYPGAPRPAALSAAVGVHCPVITAWHDGLLSRAFIQNHSAVLKDITGSVATR 414
P +M+++ RPAALSAAVGVH P ITA DGL + IQNHSAVL D TGSVATR
Sbjct: 368 PPLMMLVITPYPGTRPAALSAAVGVHRPAITACDDGLFACGVIQNHSAVLNDSTGSVATR 189
Query: 415 SGLLRRSTPMARPAGP*L*LKEIWMGPRPKYFLPGAHGHCGRGSQ*SDGGLR 570
SGLL RSTP ARPAGP*L*LKE MGPRP Y LPGAHGH G GSQ*SDGG R
Sbjct: 188 SGLLSRSTPRARPAGP*L*LKESCMGPRP*YRLPGAHGHSGLGSQ*SDGGSR 33
Score = 122 bits (260), Expect(2) = 3e-081
Identities = 48/66 (72%), Positives = 52/66 (78%)
Frame = -2 / +1
Query: 266 GYGVITNIINGGIECGHGTDPRVTDRIGFYKRYCDVFRIGYGSNLDCDGQRPFNSGLAVE 87
GYGVITNIINGG+ECG G DPRV DRIGFYKRYCDV +GY SNLDCD QRP S +
Sbjct: 334 GYGVITNIINGGLECGRGHDPRVVDRIGFYKRYCDVLGVGY*SNLDCDNQRPVTSSASAG 513
Query: 86 VAAQ*K 69
+A Q*K
Sbjct: 514 LAEQ*K 531
Score = 111 bits (237), Expect(2) = 9e-046
Identities = 50/76 (65%), Positives = 56/76 (73%)
Frame = +1 / -1
Query: 70 FHCAATSTASPLLKGLWPSQSRLLP*PMRKTSQ*RL*KPIRSVTRGSVPCPHSIPPLMML 249
FHC+A+ + L+ GLW SQSRLL *P TSQ*RL*KP+RS TRGS P PHS PPLMML
Sbjct: 530 FHCSASPAEALLVTGLWLSQSRLLQ*PTPSTSQ*RL*KPMRSTTRGSCPRPHSSPPLMML 351
Query: 250 VITPYPGAPRPAALSA 297
VITPYPG A +A
Sbjct: 350 VITPYPGTRPAALSAA 303
Score = 95.5 bits (202), Expect(2) = 3e-032
Identities = 42/66 (63%), Positives = 49/66 (74%)
Frame = +3 / -3
Query: 69 FSLRRHLNRQSAIEGPLAVAIEIAPVADAEDIAVALVEANPVGDPGVRPVPALDPTVDDV 248
FSL R +R +A + PL VA+E+A VADAE +AVALVEA+ V PGV P PA P VDDV
Sbjct: 531 FSLLREPSRGAAGDRPLVVAVEVASVADAEYVAVALVEADAVDHPGVMPTPAFQPAVDDV 352
Query: 249 GDHAVP 266
GDHAVP
Sbjct: 351 GDHAVP 334
Score = 91.8 bits (194), Expect(2) = 9e-046
Identities = 44/75 (58%), Positives = 47/75 (62%)
Frame = +3 / -3
Query: 276 PAGRPVRSRGRPLPRDHGVARRLVVPRVHPEPQRCLEGYHGXXXXXXXXXXXXHADGSPR 455
PAGR VR R RP PRDH V RRLV R HPEPQR LE H A+ +PR
Sbjct: 327 PAGRVVRGRRRPPPRDHRVRRRLVRLRGHPEPQRRLERQHRVRGHQVRVAQQVDAESAPR 148
Query: 456 RAVVVVEGDLDGAAA 500
RAVVVVEG+L GAAA
Sbjct: 147 RAVVVVEGELHGAAA 103
Score = 63.8 bits (133), Expect(3) = 5e-024
Identities = 27/39 (69%), Positives = 31/39 (79%)
Frame = -1 / +3
Query: 390 ILQDSAVVLDERAGQQAVVPRRDHGAVDAHGCGQGGRPG 274
++QD AVVLD+ AG+QAVV R D GAVDA G GQ GRPG
Sbjct: 213 VVQDGAVVLDDPAGEQAVVARGDRGAVDADGRGQRGRPG 329
Score = 62.5 bits (130), Expect(2) = 3e-032
Identities = 27/39 (69%), Positives = 28/39 (71%)
Frame = +2 / -2
Query: 260 RTLARPGRPPCPQPWASTAP*SRRGTTACCPARSSRTTA 376
R PGRP CP+P ASTAP S R TTAC PA SSRTTA
Sbjct: 343 RRTRAPGRPRCPRPSASTAPRSPRATTACSPAGSSRTTA 227
Score = 45.5 bits (93), Expect(3) = 5e-024
Identities = 21/32 (65%), Positives = 23/32 (71%)
Frame = -1 / +3
Query: 207 PPGHRPDWLLQALLRCLPHRLREQSRLRRPEA 112
PPG RP LLQALLR RL +Q RLR+PEA
Sbjct: 393 PPGGRPHRLLQALLRRTRRRLLKQPRLRQPEA 488
Score = 38.6 bits (78), Expect(3) = 5e-024
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = -1 / +3
Query: 498 PRPHPDLLQLQLRPGGA 448
PRPH LLQLQLRPGGA
Sbjct: 105 PRPHAALLQLQLRPGGA 155
>gb|U02287.1|HVU02287 Hordeum vulgare cultivar NK1558 chitinase gene, complete cds
Length = 1684
Score = 181 bits (390), Expect(2) = 1e-073
Identities = 67/87 (77%), Positives = 73/87 (83%)
Frame = -2 / +3
Query: 569 RNPPSDYCEPRPQWPCAPGKKYFGRGPIQISFNYNYGPAGRAIGVDLLNNPDLVATDPVI 390
R S+YC P QWPCAPGK Y+GRGPIQ+S NYNYGPAGRAIGVDLL NPDLVATDP +
Sbjct: 1092 RGATSNYCTPSAQWPCAPGKSYYGRGPIQLSHNYNYGPAGRAIGVDLLRNPDLVATDPTV 1271
Query: 389 SFKTALWFWMNARDNKPSCHAVITGQW 309
SFKTA+WFWM A+ KPS HAVITGQW
Sbjct: 1272 SFKTAMWFWMTAQAPKPSSHAVITGQW 1352
Score = 140 bits (300), Expect = 7e-033
Identities = 64/106 (60%), Positives = 72/106 (67%)
Frame = +1 / -1
Query: 235 PLMMLVITPYPGAPRPAALSAAVGVHCPVITAWHDGLLSRAFIQNHSAVLKDITGSVATR 414
P + +++ RPAA S G+H PVITAW DG + A IQNH AVL D GSVATR
Sbjct: 1426 PPLTMLVITPNPGTRPAARSVPDGLHWPVITAWLDGFGAWAVIQNHIAVLNDTVGSVATR 1247
Query: 415 SGLLRRSTPMARPAGP*L*LKEIWMGPRPKYFLPGAHGHCGRGSQ* 552
SGL RSTP+ARPAGP*L*L E W+GPRP PGAHGHC G Q*
Sbjct: 1246 SGLRSRSTPIARPAGP*L*LWESWIGPRP**LFPGAHGHCALGVQ* 1109
Score = 115 bits (245), Expect(2) = 1e-073
Identities = 41/53 (77%), Positives = 46/53 (86%)
Frame = -2 / +3
Query: 266 GYGVITNIINGGIECGHGTDPRVTDRIGFYKRYCDVFRIGYGSNLDCDGQRPF 108
G+GVITNI+NGGIECGHG D RV DRIGFYKRYCD+ +GYG+NLDC QRPF
Sbjct: 1392 GFGVITNIVNGGIECGHGQDSRVADRIGFYKRYCDILGVGYGNNLDCYSQRPF 1550
Score = 97.3 bits (206), Expect(2) = 3e-025
Identities = 39/59 (66%), Positives = 47/59 (79%)
Frame = +3 / -3
Query: 108 EGPLAVAIEIAPVADAEDIAVALVEANPVGDPGVRPVPALDPTVDDVGDHAVPWRAPAG 284
EGPLAVA+E+ VA+AED+AVALV+ +P+GD V P+PALDP VDDVGDHA P P G
Sbjct: 1550 EGPLAVAVEVVAVANAEDVAVALVKPDPIGDSTVLPMPALDPAVDDVGDHAKPRHPPRG 1374
Score = 37.3 bits (75), Expect(2) = 3e-025
Identities = 18/39 (46%), Positives = 21/39 (53%)
Frame = +3 / -3
Query: 270 RAPAGRPVRSRGRPLPRDHGVARRLVVPRVHPEPQRCLE 386
R P PVR PL RDH +ARR HP+P R L+
Sbjct: 1391 RHPPRGPVRP*WAPLARDHSMARRFWRLGRHPKPHRSLK 1275
>gb|BQ466147.1|BQ466147 HT01L11T HT Hordeum vulgare subsp. vulgare cDNA clone HT01L11
5-PRIME, mRNA sequence
Length = 673
Score = 181 bits (390), Expect(2) = 1e-073
Identities = 67/87 (77%), Positives = 73/87 (83%)
Frame = -2 / +3
Query: 569 RNPPSDYCEPRPQWPCAPGKKYFGRGPIQISFNYNYGPAGRAIGVDLLNNPDLVATDPVI 390
R S+YC P QWPCAPGK Y+GRGPIQ+S NYNYGPAGRAIGVDLL NPDLVATDP +
Sbjct: 105 RGATSNYCTPSAQWPCAPGKSYYGRGPIQLSHNYNYGPAGRAIGVDLLRNPDLVATDPTV 284
Query: 389 SFKTALWFWMNARDNKPSCHAVITGQW 309
SFKTA+WFWM A+ KPS HAVITGQW
Sbjct: 285 SFKTAMWFWMTAQAPKPSSHAVITGQW 365
Score = 144 bits (310), Expect = 3e-034
Identities = 66/106 (62%), Positives = 73/106 (68%)
Frame = +1 / -1
Query: 235 PLMMLVITPYPGAPRPAALSAAVGVHCPVITAWHDGLLSRAFIQNHSAVLKDITGSVATR 414
P + +++ RPAA S G+H PVITAW DG + A IQNH AVL D GSVATR
Sbjct: 439 PPLTMLVITPNPGTRPAARSVPDGLHWPVITAWLDGFGAWAVIQNHIAVLNDTVGSVATR 260
Query: 415 SGLLRRSTPMARPAGP*L*LKEIWMGPRPKYFLPGAHGHCGRGSQ* 552
SGL RRSTPMARPAGP*L*L E W+GPRP PGAHGHC G Q*
Sbjct: 259 SGLRRRSTPMARPAGP*L*LWESWIGPRP**LFPGAHGHCALGVQ* 122
Score = 115 bits (245), Expect(2) = 1e-073
Identities = 41/53 (77%), Positives = 46/53 (86%)
Frame = -2 / +3
Query: 266 GYGVITNIINGGIECGHGTDPRVTDRIGFYKRYCDVFRIGYGSNLDCDGQRPF 108
G+GVITNI+NGGIECGHG D RV DRIGFYKRYCD+ +GYG+NLDC QRPF
Sbjct: 405 GFGVITNIVNGGIECGHGQDSRVADRIGFYKRYCDILGVGYGNNLDCYNQRPF 563
Score = 94.1 bits (199), Expect(2) = 5e-025
Identities = 42/54 (77%), Positives = 43/54 (79%)
Frame = +1 / -1
Query: 109 KGLWPSQSRLLP*PMRKTSQ*RL*KPIRSVTRGSVPCPHSIPPLMMLVITPYPG 270
KGLW QSRLLP*P + SQ*RL* PIRS TR S PCPHSIPPL MLVITP PG
Sbjct: 562 KGLWL*QSRLLP*PTPRMSQ*RL*NPIRSATRLSCPCPHSIPPLTMLVITPNPG 401
Score = 39.6 bits (80), Expect(2) = 5e-025
Identities = 19/37 (51%), Positives = 22/37 (59%)
Frame = +3 / -3
Query: 276 PAGRPVRSRGRPLPRDHGVARRLVVPRVHPEPQRCLE 386
PA PVR PL RDH +ARRL HP+P R L+
Sbjct: 398 PARCPVRP*WAPLARDHSMARRLWRLGRHPKPHRSLK 288
>gb|CA013166.1|CA013166 HT07J12r HT Hordeum vulgare subsp. vulgare cDNA clone HT07J12
5-PRIME, mRNA sequence
Length = 639
Score = 181 bits (390), Expect(2) = 1e-073
Identities = 67/87 (77%), Positives = 73/87 (83%)
Frame = -2 / +3
Query: 569 RNPPSDYCEPRPQWPCAPGKKYFGRGPIQISFNYNYGPAGRAIGVDLLNNPDLVATDPVI 390
R S+YC P QWPCAPGK Y+GRGPIQ+S NYNYGPAGRAIGVDLL NPDLVATDP +
Sbjct: 147 RGATSNYCTPSAQWPCAPGKSYYGRGPIQLSHNYNYGPAGRAIGVDLLRNPDLVATDPTV 326
Query: 389 SFKTALWFWMNARDNKPSCHAVITGQW 309
SFKTA+WFWM A+ KPS HAVITGQW
Sbjct: 327 SFKTAMWFWMTAQAPKPSSHAVITGQW 407
Score = 144 bits (310), Expect = 3e-034
Identities = 66/106 (62%), Positives = 73/106 (68%)
Frame = +1 / -3
Query: 235 PLMMLVITPYPGAPRPAALSAAVGVHCPVITAWHDGLLSRAFIQNHSAVLKDITGSVATR 414
P + +++ RPAA S G+H PVITAW DG + A IQNH AVL D GSVATR
Sbjct: 481 PPLTMLVITPNPGTRPAARSVPDGLHWPVITAWLDGFGAWAVIQNHIAVLNDTVGSVATR 302
Query: 415 SGLLRRSTPMARPAGP*L*LKEIWMGPRPKYFLPGAHGHCGRGSQ* 552
SGL RRSTPMARPAGP*L*L E W+GPRP PGAHGHC G Q*
Sbjct: 301 SGLRRRSTPMARPAGP*L*LWESWIGPRP**LFPGAHGHCALGVQ* 164
Score = 115 bits (245), Expect(2) = 1e-073
Identities = 41/53 (77%), Positives = 46/53 (86%)
Frame = -2 / +3
Query: 266 GYGVITNIINGGIECGHGTDPRVTDRIGFYKRYCDVFRIGYGSNLDCDGQRPF 108
G+GVITNI+NGGIECGHG D RV DRIGFYKRYCD+ +GYG+NLDC QRPF
Sbjct: 447 GFGVITNIVNGGIECGHGQDSRVADRIGFYKRYCDILGVGYGNNLDCYNQRPF 605
Score = 94.1 bits (199), Expect(2) = 5e-025
Identities = 42/54 (77%), Positives = 43/54 (79%)
Frame = +1 / -3
Query: 109 KGLWPSQSRLLP*PMRKTSQ*RL*KPIRSVTRGSVPCPHSIPPLMMLVITPYPG 270
KGLW QSRLLP*P + SQ*RL* PIRS TR S PCPHSIPPL MLVITP PG
Sbjct: 604 KGLWL*QSRLLP*PTPRMSQ*RL*NPIRSATRLSCPCPHSIPPLTMLVITPNPG 443
Score = 39.6 bits (80), Expect(2) = 5e-025
Identities = 19/37 (51%), Positives = 22/37 (59%)
Frame = +3 / -2
Query: 276 PAGRPVRSRGRPLPRDHGVARRLVVPRVHPEPQRCLE 386
PA PVR PL RDH +ARRL HP+P R L+
Sbjct: 440 PARCPVRP*WAPLARDHSMARRLWRLGRHPKPHRSLK 330
>gb|CA013604.1|CA013604 HT08P16r HT Hordeum vulgare subsp. vulgare cDNA clone HT08P16
5-PRIME, mRNA sequence
Length = 633
Score = 181 bits (390), Expect(2) = 1e-073
Identities = 67/87 (77%), Positives = 73/87 (83%)
Frame = -2 / +1
Query: 569 RNPPSDYCEPRPQWPCAPGKKYFGRGPIQISFNYNYGPAGRAIGVDLLNNPDLVATDPVI 390
R S+YC P QWPCAPGK Y+GRGPIQ+S NYNYGPAGRAIGVDLL NPDLVATDP +
Sbjct: 43 RGATSNYCTPSAQWPCAPGKSYYGRGPIQLSHNYNYGPAGRAIGVDLLRNPDLVATDPTV 222
Query: 389 SFKTALWFWMNARDNKPSCHAVITGQW 309
SFKTA+WFWM A+ KPS HAVITGQW
Sbjct: 223 SFKTAMWFWMTAQAPKPSSHAVITGQW 303
Score = 144 bits (310), Expect = 3e-034
Identities = 66/106 (62%), Positives = 73/106 (68%)
Frame = +1 / -2
Query: 235 PLMMLVITPYPGAPRPAALSAAVGVHCPVITAWHDGLLSRAFIQNHSAVLKDITGSVATR 414
P + +++ RPAA S G+H PVITAW DG + A IQNH AVL D GSVATR
Sbjct: 377 PPLTMLVITPNPGTRPAARSVPDGLHWPVITAWLDGFGAWAVIQNHIAVLNDTVGSVATR 198
Query: 415 SGLLRRSTPMARPAGP*L*LKEIWMGPRPKYFLPGAHGHCGRGSQ* 552
SGL RRSTPMARPAGP*L*L E W+GPRP PGAHGHC G Q*
Sbjct: 197 SGLRRRSTPMARPAGP*L*LWESWIGPRP**LFPGAHGHCALGVQ* 60
Score = 115 bits (245), Expect(2) = 1e-073
Identities = 41/53 (77%), Positives = 46/53 (86%)
Frame = -2 / +1
Query: 266 GYGVITNIINGGIECGHGTDPRVTDRIGFYKRYCDVFRIGYGSNLDCDGQRPF 108
G+GVITNI+NGGIECGHG D RV DRIGFYKRYCD+ +GYG+NLDC QRPF
Sbjct: 343 GFGVITNIVNGGIECGHGQDSRVADRIGFYKRYCDILGVGYGNNLDCYNQRPF 501
Score = 94.1 bits (199), Expect(2) = 5e-025
Identities = 42/54 (77%), Positives = 43/54 (79%)
Frame = +1 / -2
Query: 109 KGLWPSQSRLLP*PMRKTSQ*RL*KPIRSVTRGSVPCPHSIPPLMMLVITPYPG 270
KGLW QSRLLP*P + SQ*RL* PIRS TR S PCPHSIPPL MLVITP PG
Sbjct: 500 KGLWL*QSRLLP*PTPRMSQ*RL*NPIRSATRLSCPCPHSIPPLTMLVITPNPG 339
Score = 39.6 bits (80), Expect(2) = 5e-025
Identities = 19/37 (51%), Positives = 22/37 (59%)
Frame = +3 / -1
Query: 276 PAGRPVRSRGRPLPRDHGVARRLVVPRVHPEPQRCLE 386
PA PVR PL RDH +ARRL HP+P R L+
Sbjct: 336 PARCPVRP*WAPLARDHSMARRLWRLGRHPKPHRSLK 226
>emb|X15349.1|HVENDCHT Barley (H.vulgare) mRNA for endochitinase
Length = 556
Score = 181 bits (390), Expect(2) = 1e-073
Identities = 67/87 (77%), Positives = 73/87 (83%)
Frame = -2 / +1
Query: 569 RNPPSDYCEPRPQWPCAPGKKYFGRGPIQISFNYNYGPAGRAIGVDLLNNPDLVATDPVI 390
R S+YC P QWPCAPGK Y+GRGPIQ+S NYNYGPAGRAIGVDLL NPDLVATDP +
Sbjct: 73 RGATSNYCTPSAQWPCAPGKSYYGRGPIQLSHNYNYGPAGRAIGVDLLRNPDLVATDPTV 252
Query: 389 SFKTALWFWMNARDNKPSCHAVITGQW 309
SFKTA+WFWM A+ KPS HAVITGQW
Sbjct: 253 SFKTAMWFWMTAQAPKPSSHAVITGQW 333
Score = 140 bits (300), Expect = 7e-033
Identities = 64/106 (60%), Positives = 72/106 (67%)
Frame = +1 / -3
Query: 235 PLMMLVITPYPGAPRPAALSAAVGVHCPVITAWHDGLLSRAFIQNHSAVLKDITGSVATR 414
P + +++ RPAA S G+H PVITAW DG + A IQNH AVL D GSVATR
Sbjct: 407 PPLTMLVITPNPGTRPAARSVPDGLHWPVITAWLDGFGAWAVIQNHIAVLNDTVGSVATR 228
Query: 415 SGLLRRSTPMARPAGP*L*LKEIWMGPRPKYFLPGAHGHCGRGSQ* 552
SGL RSTP+ARPAGP*L*L E W+GPRP PGAHGHC G Q*
Sbjct: 227 SGLRSRSTPIARPAGP*L*LWESWIGPRP**LFPGAHGHCALGVQ* 90
Score = 115 bits (245), Expect(2) = 1e-073
Identities = 41/53 (77%), Positives = 46/53 (86%)
Frame = -2 / +1
Query: 266 GYGVITNIINGGIECGHGTDPRVTDRIGFYKRYCDVFRIGYGSNLDCDGQRPF 108
G+GVITNI+NGGIECGHG D RV DRIGFYKRYCD+ +GYG+NLDC QRPF
Sbjct: 373 GFGVITNIVNGGIECGHGQDSRVADRIGFYKRYCDILGVGYGNNLDCYSQRPF 531
Score = 97.3 bits (206), Expect(2) = 3e-025
Identities = 39/59 (66%), Positives = 47/59 (79%)
Frame = +3 / -2
Query: 108 EGPLAVAIEIAPVADAEDIAVALVEANPVGDPGVRPVPALDPTVDDVGDHAVPWRAPAG 284
EGPLAVA+E+ VA+AED+AVALV+ +P+GD V P+PALDP VDDVGDHA P P G
Sbjct: 531 EGPLAVAVEVVAVANAEDVAVALVKPDPIGDSTVLPMPALDPAVDDVGDHAKPRHPPRG 355
Score = 37.3 bits (75), Expect(2) = 3e-025
Identities = 18/39 (46%), Positives = 21/39 (53%)
Frame = +3 / -2
Query: 270 RAPAGRPVRSRGRPLPRDHGVARRLVVPRVHPEPQRCLE 386
R P PVR PL RDH +ARR HP+P R L+
Sbjct: 372 RHPPRGPVRP*WAPLARDHSMARRFWRLGRHPKPHRSLK 256
>gb|BG415203.1|BG415203 HVSMEk0005I16f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0005I16f, mRNA sequence
Length = 908
Score = 177 bits (380), Expect(2) = 2e-072
Identities = 65/87 (74%), Positives = 72/87 (82%)
Frame = -2 / +2
Query: 569 RNPPSDYCEPRPQWPCAPGKKYFGRGPIQISFNYNYGPAGRAIGVDLLNNPDLVATDPVI 390
R SDYC P QWPCAPGK+Y+GRGPIQ+S NYNYGPAGRAIGVDLL NPDLVATD +
Sbjct: 122 RGASSDYCTPSAQWPCAPGKRYYGRGPIQLSHNYNYGPAGRAIGVDLLANPDLVATDATV 301
Query: 389 SFKTALWFWMNARDNKPSCHAVITGQW 309
+FKTA+WFWM A+ KPS HAVI GQW
Sbjct: 302 AFKTAIWFWMTAQPPKPSSHAVIAGQW 382
Score = 140 bits (300), Expect = 7e-033
Identities = 66/108 (61%), Positives = 72/108 (66%)
Frame = +1 / -3
Query: 235 PLMMLVITPYPGAPRPAALSAAVGVHCPVITAWHDGLLSRAFIQNHSAVLKDITGSVATR 414
P +M+++ RPAA SA G+H P ITAW DGL A IQN AVL SVATR
Sbjct: 456 PPLMMLVITPNPGTRPAARSAPDGLHWPAITAWLDGLGGCAVIQNQMAVLNATVASVATR 277
Query: 415 SGLLRRSTPMARPAGP*L*LKEIWMGPRPKYFLPGAHGHCGRGSQ*SD 558
SGL RSTPMARPAGP*L*L E WMGPRP PGAHGHC G Q*S+
Sbjct: 276 SGLASRSTPMARPAGP*L*LWESWMGPRP**RFPGAHGHCALGVQ*SE 133
Score = 115 bits (246), Expect(2) = 2e-072
Identities = 42/53 (79%), Positives = 46/53 (86%)
Frame = -2 / +2
Query: 266 GYGVITNIINGGIECGHGTDPRVTDRIGFYKRYCDVFRIGYGSNLDCDGQRPF 108
G+GVITNIINGGIECGHG D RV DRIGFYKRYCD+ +GYG+NLDC QRPF
Sbjct: 422 GFGVITNIINGGIECGHGQDSRVADRIGFYKRYCDILGVGYGNNLDCYNQRPF 580
Score = 90.9 bits (192), Expect(2) = 1e-028
Identities = 42/54 (77%), Positives = 43/54 (79%)
Frame = +1 / -3
Query: 109 KGLWPSQSRLLP*PMRKTSQ*RL*KPIRSVTRGSVPCPHSIPPLMMLVITPYPG 270
KGLW QSRLLP*P + SQ*RL* PIRS TR S P PHSIPPLMMLVITP PG
Sbjct: 579 KGLWL*QSRLLP*PTPRMSQ*RL*NPIRSATRLSCP*PHSIPPLMMLVITPNPG 418
Score = 54.7 bits (113), Expect(2) = 1e-028
Identities = 30/75 (40%), Positives = 36/75 (48%)
Frame = +3 / -2
Query: 276 PAGRPVRSRGRPLPRDHGVARRLVVPRVHPEPQRCLEGYHGXXXXXXXXXXXXHADGSPR 455
P PV PL DH +ARRL R HPEP L+ + G DG
Sbjct: 415 PPCGPVSP*RAPLAGDHSMARRLGRLRRHPEPDGRLKRHSGVRGHQVRVGQQIDPDGPAG 236
Query: 456 RAVVVVEGDLDGAAA 500
R++VVV G+LDG AA
Sbjct: 235 RSIVVVVGELDGPAA 191
>gb|BI780034.2|BI780034 EBma08_SQ001_D14_R maternal, 28 DPA, no treatment, cv Optic, EBma08
Hordeum vulgare subsp. vulgare cDNA clone
EBma08_SQ001_D14 5', mRNA sequence
Length = 647
Score = 177 bits (380), Expect(2) = 2e-072
Identities = 65/87 (74%), Positives = 72/87 (82%)
Frame = -2 / +1
Query: 569 RNPPSDYCEPRPQWPCAPGKKYFGRGPIQISFNYNYGPAGRAIGVDLLNNPDLVATDPVI 390
R SDYC P QWPCAPGK+Y+GRGPIQ+S NYNYGPAGRAIGVDLL NPDLVATD +
Sbjct: 52 RGASSDYCTPSAQWPCAPGKRYYGRGPIQLSHNYNYGPAGRAIGVDLLANPDLVATDATV 231
Query: 389 SFKTALWFWMNARDNKPSCHAVITGQW 309
+FKTA+WFWM A+ KPS HAVI GQW
Sbjct: 232 AFKTAIWFWMTAQPPKPSSHAVIAGQW 312
Score = 138 bits (296), Expect = 2e-032
Identities = 65/108 (60%), Positives = 72/108 (66%)
Frame = +1 / -1
Query: 235 PLMMLVITPYPGAPRPAALSAAVGVHCPVITAWHDGLLSRAFIQNHSAVLKDITGSVATR 414
P +M+++ RPAA SA G+H P ITAW DGL A IQN AVL SVATR
Sbjct: 386 PPLMMLVITPNPGTRPAARSAPDGLHWPAITAWLDGLGGCAVIQNQMAVLNATVASVATR 207
Query: 415 SGLLRRSTPMARPAGP*L*LKEIWMGPRPKYFLPGAHGHCGRGSQ*SD 558
SGL RSTPMARPAGP*L*L E W+GPRP PGAHGHC G Q*S+
Sbjct: 206 SGLASRSTPMARPAGP*L*LWESWIGPRP**RFPGAHGHCALGVQ*SE 63
Score = 115 bits (246), Expect(2) = 2e-072
Identities = 42/53 (79%), Positives = 46/53 (86%)
Frame = -2 / +1
Query: 266 GYGVITNIINGGIECGHGTDPRVTDRIGFYKRYCDVFRIGYGSNLDCDGQRPF 108
G+GVITNIINGGIECGHG D RV DRIGFYKRYCD+ +GYG+NLDC QRPF
Sbjct: 352 GFGVITNIINGGIECGHGQDSRVADRIGFYKRYCDILGVGYGNNLDCYSQRPF 510
Score = 90.9 bits (192), Expect(2) = 2e-026
Identities = 42/54 (77%), Positives = 43/54 (79%)
Frame = +1 / -1
Query: 109 KGLWPSQSRLLP*PMRKTSQ*RL*KPIRSVTRGSVPCPHSIPPLMMLVITPYPG 270
KGLW QSRLLP*P + SQ*RL* PIRS TR S P PHSIPPLMMLVITP PG
Sbjct: 509 KGLWL*QSRLLP*PTPRMSQ*RL*NPIRSATRLSCP*PHSIPPLMMLVITPNPG 348
Score = 47.3 bits (97), Expect(2) = 2e-026
Identities = 28/75 (37%), Positives = 34/75 (45%)
Frame = +3 / -3
Query: 276 PAGRPVRSRGRPLPRDHGVARRLVVPRVHPEPQRCLEGYHGXXXXXXXXXXXXHADGSPR 455
P PV PL DH +AR L R HPEP L+ + G DG
Sbjct: 345 PPCGPVSP*RAPLAGDHSMARWLGRLRRHPEPDGRLKRHSGVRGHQVRVGQQIDPDGPAG 166
Query: 456 RAVVVVEGDLDGAAA 500
R++VVV G+LD AA
Sbjct: 165 RSIVVVVGELDRPAA 121
>gb|BQ465942.1|BQ465942 HT01C02T HT Hordeum vulgare subsp. vulgare cDNA clone HT01C02
5-PRIME, mRNA sequence
Length = 642
Score = 177 bits (380), Expect(2) = 2e-072
Identities = 65/87 (74%), Positives = 72/87 (82%)
Frame = -2 / +1
Query: 569 RNPPSDYCEPRPQWPCAPGKKYFGRGPIQISFNYNYGPAGRAIGVDLLNNPDLVATDPVI 390
R SDYC P QWPCAPGK+Y+GRGPIQ+S NYNYGPAGRAIGVDLL NPDLVATD +
Sbjct: 37 RGASSDYCTPSAQWPCAPGKRYYGRGPIQLSHNYNYGPAGRAIGVDLLANPDLVATDATV 216
Query: 389 SFKTALWFWMNARDNKPSCHAVITGQW 309
+FKTA+WFWM A+ KPS HAVI GQW
Sbjct: 217 AFKTAIWFWMTAQPPKPSSHAVIAGQW 297
Score = 138 bits (296), Expect = 2e-032
Identities = 65/108 (60%), Positives = 72/108 (66%)
Frame = +1 / -2
Query: 235 PLMMLVITPYPGAPRPAALSAAVGVHCPVITAWHDGLLSRAFIQNHSAVLKDITGSVATR 414
P +M+++ RPAA SA G+H P ITAW DGL A IQN AVL SVATR
Sbjct: 371 PPLMMLVITPNPGTRPAARSAPDGLHWPAITAWLDGLGGCAVIQNQMAVLNATVASVATR 192
Query: 415 SGLLRRSTPMARPAGP*L*LKEIWMGPRPKYFLPGAHGHCGRGSQ*SD 558
SGL RSTPMARPAGP*L*L E W+GPRP PGAHGHC G Q*S+
Sbjct: 191 SGLASRSTPMARPAGP*L*LWESWIGPRP**RFPGAHGHCALGVQ*SE 48
Score = 115 bits (246), Expect(2) = 2e-072
Identities = 42/53 (79%), Positives = 46/53 (86%)
Frame = -2 / +1
Query: 266 GYGVITNIINGGIECGHGTDPRVTDRIGFYKRYCDVFRIGYGSNLDCDGQRPF 108
G+GVITNIINGGIECGHG D RV DRIGFYKRYCD+ +GYG+NLDC QRPF
Sbjct: 337 GFGVITNIINGGIECGHGQDSRVADRIGFYKRYCDILGVGYGNNLDCYSQRPF 495
Score = 90.9 bits (192), Expect(2) = 2e-026
Identities = 42/54 (77%), Positives = 43/54 (79%)
Frame = +1 / -2
Query: 109 KGLWPSQSRLLP*PMRKTSQ*RL*KPIRSVTRGSVPCPHSIPPLMMLVITPYPG 270
KGLW QSRLLP*P + SQ*RL* PIRS TR S P PHSIPPLMMLVITP PG
Sbjct: 494 KGLWL*QSRLLP*PTPRMSQ*RL*NPIRSATRLSCP*PHSIPPLMMLVITPNPG 333
Score = 47.3 bits (97), Expect(2) = 2e-026
Identities = 28/75 (37%), Positives = 34/75 (45%)
Frame = +3 / -1
Query: 276 PAGRPVRSRGRPLPRDHGVARRLVVPRVHPEPQRCLEGYHGXXXXXXXXXXXXHADGSPR 455
P PV PL DH +AR L R HPEP L+ + G DG
Sbjct: 330 PPCGPVSP*RAPLAGDHSMARWLGRLRRHPEPDGRLKRHSGVRGHQVRVGQQIDPDGPAG 151
Query: 456 RAVVVVEGDLDGAAA 500
R++VVV G+LD AA
Sbjct: 150 RSIVVVVGELDRPAA 106
>gb|BQ466541.1|BQ466541 HT02N08r HT Hordeum vulgare subsp. vulgare cDNA clone HT02N08
5-PRIME, mRNA sequence
Length = 536
Score = 177 bits (380), Expect(2) = 2e-072
Identities = 65/87 (74%), Positives = 72/87 (82%)
Frame = -2 / +2
Query: 569 RNPPSDYCEPRPQWPCAPGKKYFGRGPIQISFNYNYGPAGRAIGVDLLNNPDLVATDPVI 390
R SDYC P QWPCAPGK+Y+GRGPIQ+S NYNYGPAGRAIGVDLL NPDLVATD +
Sbjct: 47 RGASSDYCTPSAQWPCAPGKRYYGRGPIQLSHNYNYGPAGRAIGVDLLANPDLVATDATV 226
Query: 389 SFKTALWFWMNARDNKPSCHAVITGQW 309
+FKTA+WFWM A+ KPS HAVI GQW
Sbjct: 227 AFKTAIWFWMTAQPPKPSSHAVIAGQW 307
Score = 138 bits (296), Expect = 2e-032
Identities = 65/108 (60%), Positives = 72/108 (66%)
Frame = +1 / -3
Query: 235 PLMMLVITPYPGAPRPAALSAAVGVHCPVITAWHDGLLSRAFIQNHSAVLKDITGSVATR 414
P +M+++ RPAA SA G+H P ITAW DGL A IQN AVL SVATR
Sbjct: 381 PPLMMLVITPNPGTRPAARSAPDGLHWPAITAWLDGLGGCAVIQNQMAVLNATVASVATR 202
Query: 415 SGLLRRSTPMARPAGP*L*LKEIWMGPRPKYFLPGAHGHCGRGSQ*SD 558
SGL RSTPMARPAGP*L*L E W+GPRP PGAHGHC G Q*S+
Sbjct: 201 SGLASRSTPMARPAGP*L*LWESWIGPRP**RFPGAHGHCALGVQ*SE 58
Score = 115 bits (246), Expect(2) = 2e-072
Identities = 42/53 (79%), Positives = 46/53 (86%)
Frame = -2 / +2
Query: 266 GYGVITNIINGGIECGHGTDPRVTDRIGFYKRYCDVFRIGYGSNLDCDGQRPF 108
G+GVITNIINGGIECGHG D RV DRIGFYKRYCD+ +GYG+NLDC QRPF
Sbjct: 347 GFGVITNIINGGIECGHGQDSRVADRIGFYKRYCDILGVGYGNNLDCYSQRPF 505
Score = 90.9 bits (192), Expect(2) = 2e-026
Identities = 42/54 (77%), Positives = 43/54 (79%)
Frame = +1 / -3
Query: 109 KGLWPSQSRLLP*PMRKTSQ*RL*KPIRSVTRGSVPCPHSIPPLMMLVITPYPG 270
KGLW QSRLLP*P + SQ*RL* PIRS TR S P PHSIPPLMMLVITP PG
Sbjct: 504 KGLWL*QSRLLP*PTPRMSQ*RL*NPIRSATRLSCP*PHSIPPLMMLVITPNPG 343
Score = 47.3 bits (97), Expect(2) = 2e-026
Identities = 28/75 (37%), Positives = 34/75 (45%)
Frame = +3 / -2
Query: 276 PAGRPVRSRGRPLPRDHGVARRLVVPRVHPEPQRCLEGYHGXXXXXXXXXXXXHADGSPR 455
P PV PL DH +AR L R HPEP L+ + G DG
Sbjct: 340 PPCGPVSP*RAPLAGDHSMARWLGRLRRHPEPDGRLKRHSGVRGHQVRVGQQIDPDGPAG 161
Query: 456 RAVVVVEGDLDGAAA 500
R++VVV G+LD AA
Sbjct: 160 RSIVVVVGELDRPAA 116
>gb|BG414755.1|BG414755 HVSMEk0003J19f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0003J19f, mRNA sequence
Length = 625
Score = 175 bits (377), Expect(2) = 4e-072
Identities = 64/83 (77%), Positives = 71/83 (85%)
Frame = -2 / +1
Query: 557 SDYCEPRPQWPCAPGKKYFGRGPIQISFNYNYGPAGRAIGVDLLNNPDLVATDPVISFKT 378
SDYC P QWPCAPGK+Y+GRGPIQ+S NYNYGPAGRAIGVDLL NPDLVATD ++FKT
Sbjct: 10 SDYCTPSAQWPCAPGKRYYGRGPIQLSHNYNYGPAGRAIGVDLLANPDLVATDATVAFKT 189
Query: 377 ALWFWMNARDNKPSCHAVITGQW 309
A+WFWM A+ KPS HAVI GQW
Sbjct: 190 AIWFWMTAQPPKPSSHAVIAGQW 258
Score = 140 bits (300), Expect = 7e-033
Identities = 66/108 (61%), Positives = 72/108 (66%)
Frame = +1 / -3
Query: 235 PLMMLVITPYPGAPRPAALSAAVGVHCPVITAWHDGLLSRAFIQNHSAVLKDITGSVATR 414
P +M+++ RPAA SA G+H P ITAW DGL A IQN AVL SVATR
Sbjct: 332 PPLMMLVITPNPGTRPAARSAPDGLHWPAITAWLDGLGGCAVIQNQMAVLNATVASVATR 153
Query: 415 SGLLRRSTPMARPAGP*L*LKEIWMGPRPKYFLPGAHGHCGRGSQ*SD 558
SGL RSTPMARPAGP*L*L E WMGPRP PGAHGHC G Q*S+
Sbjct: 152 SGLASRSTPMARPAGP*L*LWESWMGPRP**RFPGAHGHCALGVQ*SE 9
Score = 115 bits (246), Expect(2) = 4e-072
Identities = 42/53 (79%), Positives = 46/53 (86%)
Frame = -2 / +1
Query: 266 GYGVITNIINGGIECGHGTDPRVTDRIGFYKRYCDVFRIGYGSNLDCDGQRPF 108
G+GVITNIINGGIECGHG D RV DRIGFYKRYCD+ +GYG+NLDC QRPF
Sbjct: 298 GFGVITNIINGGIECGHGQDSRVADRIGFYKRYCDILGVGYGNNLDCYSQRPF 456
Score = 90.9 bits (192), Expect(2) = 1e-028
Identities = 42/54 (77%), Positives = 43/54 (79%)
Frame = +1 / -3
Query: 109 KGLWPSQSRLLP*PMRKTSQ*RL*KPIRSVTRGSVPCPHSIPPLMMLVITPYPG 270
KGLW QSRLLP*P + SQ*RL* PIRS TR S P PHSIPPLMMLVITP PG
Sbjct: 455 KGLWL*QSRLLP*PTPRMSQ*RL*NPIRSATRLSCP*PHSIPPLMMLVITPNPG 294
Score = 54.7 bits (113), Expect(2) = 1e-028
Identities = 30/75 (40%), Positives = 36/75 (48%)
Frame = +3 / -2
Query: 276 PAGRPVRSRGRPLPRDHGVARRLVVPRVHPEPQRCLEGYHGXXXXXXXXXXXXHADGSPR 455
P PV PL DH +ARRL R HPEP L+ + G DG
Sbjct: 291 PPCGPVSP*RAPLAGDHSMARRLGRLRRHPEPDGRLKRHSGVRGHQVRVGQQIDPDGPAG 112
Query: 456 RAVVVVEGDLDGAAA 500
R++VVV G+LDG AA
Sbjct: 111 RSIVVVVGELDGPAA 67
>gb|BE454492.3|BE454492 HVSMEh0094A02f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0094A02f, mRNA sequence
Length = 688
Score = 177 bits (380), Expect(2) = 1e-071
Identities = 65/87 (74%), Positives = 72/87 (82%)
Frame = -2 / +3
Query: 569 RNPPSDYCEPRPQWPCAPGKKYFGRGPIQISFNYNYGPAGRAIGVDLLNNPDLVATDPVI 390
R SDYC P QWPCAPGK+Y+GRGPIQ+S NYNYGPAGRAIGVDLL NPDLVATD +
Sbjct: 42 RGASSDYCTPSAQWPCAPGKRYYGRGPIQLSHNYNYGPAGRAIGVDLLANPDLVATDATV 221
Query: 389 SFKTALWFWMNARDNKPSCHAVITGQW 309
+FKTA+WFWM A+ KPS HAVI GQW
Sbjct: 222 AFKTAIWFWMTAQPPKPSSHAVIAGQW 302
Score = 140 bits (300), Expect = 7e-033
Identities = 66/108 (61%), Positives = 72/108 (66%)
Frame = +1 / -1
Query: 235 PLMMLVITPYPGAPRPAALSAAVGVHCPVITAWHDGLLSRAFIQNHSAVLKDITGSVATR 414
P +M+++ RPAA SA G+H P ITAW DGL A IQN AVL SVATR
Sbjct: 376 PPLMMLVITPNPGTRPAARSAPDGLHWPAITAWLDGLGGCAVIQNQMAVLNATVASVATR 197
Query: 415 SGLLRRSTPMARPAGP*L*LKEIWMGPRPKYFLPGAHGHCGRGSQ*SD 558
SGL RSTPMARPAGP*L*L E WMGPRP PGAHGHC G Q*S+
Sbjct: 196 SGLASRSTPMARPAGP*L*LWESWMGPRP**RFPGAHGHCALGVQ*SE 53
Score = 112 bits (240), Expect(2) = 1e-071
Identities = 41/53 (77%), Positives = 45/53 (84%)
Frame = -2 / +3
Query: 266 GYGVITNIINGGIECGHGTDPRVTDRIGFYKRYCDVFRIGYGSNLDCDGQRPF 108
G+GVITNIINGGIECGHG D RV DRIGFYKRYCD+ +GYG +LDC QRPF
Sbjct: 342 GFGVITNIINGGIECGHGQDSRVADRIGFYKRYCDILGVGYGKHLDCYSQRPF 500
Score = 86.8 bits (183), Expect(2) = 2e-027
Identities = 40/54 (74%), Positives = 41/54 (75%)
Frame = +1 / -1
Query: 109 KGLWPSQSRLLP*PMRKTSQ*RL*KPIRSVTRGSVPCPHSIPPLMMLVITPYPG 270
KGLW QSR P*P + SQ*RL* PIRS TR S P PHSIPPLMMLVITP PG
Sbjct: 499 KGLWL*QSRCFP*PTPRMSQ*RL*NPIRSATRLSCP*PHSIPPLMMLVITPNPG 338
Score = 54.7 bits (113), Expect(2) = 2e-027
Identities = 30/75 (40%), Positives = 36/75 (48%)
Frame = +3 / -3
Query: 276 PAGRPVRSRGRPLPRDHGVARRLVVPRVHPEPQRCLEGYHGXXXXXXXXXXXXHADGSPR 455
P PV PL DH +ARRL R HPEP L+ + G DG
Sbjct: 335 PPCGPVSP*RAPLAGDHSMARRLGRLRRHPEPDGRLKRHSGVRGHQVRVGQQIDPDGPAG 156
Query: 456 RAVVVVEGDLDGAAA 500
R++VVV G+LDG AA
Sbjct: 155 RSIVVVVGELDGPAA 111
>gb|BQ465191.1|BQ465191 HU02O12r HU Hordeum vulgare subsp. vulgare cDNA clone HU02O12
5-PRIME, mRNA sequence
Length = 580
Score = 174 bits (375), Expect(2) = 1e-071
Identities = 64/80 (80%), Positives = 69/80 (86%)
Frame = -2 / +3
Query: 548 CEPRPQWPCAPGKKYFGRGPIQISFNYNYGPAGRAIGVDLLNNPDLVATDPVISFKTALW 369
C P QWPCAPGK Y+GRGPIQ+S NYNYGPAGRAIGVDLL NPDLVATDP +SFKTA+W
Sbjct: 12 CTPSAQWPCAPGKSYYGRGPIQLSHNYNYGPAGRAIGVDLLRNPDLVATDPTVSFKTAMW 191
Query: 368 FWMNARDNKPSCHAVITGQW 309
FWM A+ KPS HAVITGQW
Sbjct: 192 FWMTAQAPKPSSHAVITGQW 251
Score = 144 bits (309), Expect = 4e-034
Identities = 65/105 (61%), Positives = 72/105 (68%)
Frame = +1 / -1
Query: 235 PLMMLVITPYPGAPRPAALSAAVGVHCPVITAWHDGLLSRAFIQNHSAVLKDITGSVATR 414
P + +++ RPAA S G+H PVITAW DG + A IQNH AVL D GSVATR
Sbjct: 325 PPLTMLVITPNPGTRPAARSVPDGLHWPVITAWLDGFGAWAVIQNHIAVLNDTVGSVATR 146
Query: 415 SGLLRRSTPMARPAGP*L*LKEIWMGPRPKYFLPGAHGHCGRGSQ 549
SGL RRSTPMARPAGP*L*L E W+GPRP PGAHGHC G Q
Sbjct: 145 SGLRRRSTPMARPAGP*L*LWESWIGPRP**LFPGAHGHCALGVQ 11
Score = 115 bits (245), Expect(2) = 1e-071
Identities = 41/53 (77%), Positives = 46/53 (86%)
Frame = -2 / +3
Query: 266 GYGVITNIINGGIECGHGTDPRVTDRIGFYKRYCDVFRIGYGSNLDCDGQRPF 108
G+GVITNI+NGGIECGHG D RV DRIGFYKRYCD+ +GYG+NLDC QRPF
Sbjct: 291 GFGVITNIVNGGIECGHGQDSRVADRIGFYKRYCDILGVGYGNNLDCYNQRPF 449
Score = 94.1 bits (199), Expect(2) = 5e-025
Identities = 42/54 (77%), Positives = 43/54 (79%)
Frame = +1 / -1
Query: 109 KGLWPSQSRLLP*PMRKTSQ*RL*KPIRSVTRGSVPCPHSIPPLMMLVITPYPG 270
KGLW QSRLLP*P + SQ*RL* PIRS TR S PCPHSIPPL MLVITP PG
Sbjct: 448 KGLWL*QSRLLP*PTPRMSQ*RL*NPIRSATRLSCPCPHSIPPLTMLVITPNPG 287
Score = 39.6 bits (80), Expect(2) = 5e-025
Identities = 19/37 (51%), Positives = 22/37 (59%)
Frame = +3 / -3
Query: 276 PAGRPVRSRGRPLPRDHGVARRLVVPRVHPEPQRCLE 386
PA PVR PL RDH +ARRL HP+P R L+
Sbjct: 284 PARCPVRP*WAPLARDHSMARRLWRLGRHPKPHRSLK 174
>gb|BQ755807.1|BQ755807 EBed07_SQ003_N15_R endosperm, 28 DPA, no treatment, cv Optic,
EBed07 Hordeum vulgare subsp. vulgare cDNA clone
EBed07_SQ003_N15 5', mRNA sequence
Length = 688
Score = 177 bits (380), Expect(2) = 2e-071
Identities = 65/87 (74%), Positives = 72/87 (82%)
Frame = -2 / +1
Query: 569 RNPPSDYCEPRPQWPCAPGKKYFGRGPIQISFNYNYGPAGRAIGVDLLNNPDLVATDPVI 390
R SDYC P QWPCAPGK+Y+GRGPIQ+S NYNYGPAGRAIGVDLL NPDLVATD +
Sbjct: 172 RGASSDYCTPSAQWPCAPGKRYYGRGPIQLSHNYNYGPAGRAIGVDLLANPDLVATDATV 351
Query: 389 SFKTALWFWMNARDNKPSCHAVITGQW 309
+FKTA+WFWM A+ KPS HAVI GQW
Sbjct: 352 AFKTAIWFWMTAQPPKPSSHAVIAGQW 432
Score = 138 bits (296), Expect = 2e-032
Identities = 65/108 (60%), Positives = 72/108 (66%)
Frame = +1 / -3
Query: 235 PLMMLVITPYPGAPRPAALSAAVGVHCPVITAWHDGLLSRAFIQNHSAVLKDITGSVATR 414
P +M+++ RPAA SA G+H P ITAW DGL A IQN AVL SVATR
Sbjct: 506 PPLMMLVITPNPGTRPAARSAPDGLHWPAITAWLDGLGGCAVIQNQMAVLNATVASVATR 327
Query: 415 SGLLRRSTPMARPAGP*L*LKEIWMGPRPKYFLPGAHGHCGRGSQ*SD 558
SGL RSTPMARPAGP*L*L E W+GPRP PGAHGHC G Q*S+
Sbjct: 326 SGLASRSTPMARPAGP*L*LWESWIGPRP**RFPGAHGHCALGVQ*SE 183
Score = 111 bits (238), Expect(2) = 2e-071
Identities = 41/53 (77%), Positives = 45/53 (84%)
Frame = -2 / +1
Query: 266 GYGVITNIINGGIECGHGTDPRVTDRIGFYKRYCDVFRIGYGSNLDCDGQRPF 108
G+GVITNIINGGIECG G D RV DRIGFYKRYCD+ +GYG+NLDC QRPF
Sbjct: 472 GFGVITNIINGGIECGRGQDSRVADRIGFYKRYCDILGVGYGNNLDCYSQRPF 630
Score = 91.3 bits (193), Expect(2) = 2e-026
Identities = 42/54 (77%), Positives = 43/54 (79%)
Frame = +1 / -3
Query: 109 KGLWPSQSRLLP*PMRKTSQ*RL*KPIRSVTRGSVPCPHSIPPLMMLVITPYPG 270
KGLW QSRLLP*P + SQ*RL* PIRS TR S P PHSIPPLMMLVITP PG
Sbjct: 629 KGLWL*QSRLLP*PTPRMSQ*RL*NPIRSATRLSCPRPHSIPPLMMLVITPNPG 468
Score = 47.3 bits (97), Expect(2) = 2e-026
Identities = 28/75 (37%), Positives = 34/75 (45%)
Frame = +3 / -2
Query: 276 PAGRPVRSRGRPLPRDHGVARRLVVPRVHPEPQRCLEGYHGXXXXXXXXXXXXHADGSPR 455
P PV PL DH +AR L R HPEP L+ + G DG
Sbjct: 465 PPCGPVSP*RAPLAGDHSMARWLGRLRRHPEPDGRLKRHSGVRGHQVRVGQQIDPDGPAG 286
Query: 456 RAVVVVEGDLDGAAA 500
R++VVV G+LD AA
Sbjct: 285 RSIVVVVGELDRPAA 241
>gb|CA022080.1|CA022080 HZ42B20r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ42B20
5-PRIME, mRNA sequence
Length = 598
Score = 177 bits (382), Expect(2) = 4e-071
Identities = 62/87 (71%), Positives = 72/87 (82%)
Frame = -2 / +3
Query: 569 RNPPSDYCEPRPQWPCAPGKKYFGRGPIQISFNYNYGPAGRAIGVDLLNNPDLVATDPVI 390
R P YC+ WPCAPGK+Y+GRGPIQ++ NYNYGPAGRAIGVDLLNNPDLVA+DP +
Sbjct: 129 RGSPPSYCDQSADWPCAPGKQYYGRGPIQLTHNYNYGPAGRAIGVDLLNNPDLVASDPTV 308
Query: 389 SFKTALWFWMNARDNKPSCHAVITGQW 309
+FKTA+WFWM + NKPSCH VITG W
Sbjct: 309 AFKTAIWFWMTTQSNKPSCHDVITGLW 389
Score = 142 bits (305), Expect = 1e-033
Identities = 67/109 (61%), Positives = 73/109 (66%)
Frame = +1 / -1
Query: 235 PLMMLVITPYPGAPRPAALSAAVGVHCPVITAWHDGLLSRAFIQNHSAVLKDITGSVATR 414
P +M ++ RPAALS AVG+H PVIT+WHDGLL IQN AVL GS ATR
Sbjct: 463 PPLMTLVITPYPGTRPAALSLAVGLHNPVITSWHDGLLDCVVIQNQIAVLNATVGSDATR 284
Query: 415 SGLLRRSTPMARPAGP*L*LKEIWMGPRPKYFLPGAHGHCGRGSQ*SDG 561
SGL RSTP+ARPAGP*L*L WMGPRP Y LPGAHG SQ* G
Sbjct: 283 SGLFSRSTPIARPAGP*L*LWVSWMGPRP*YCLPGAHGQSALWSQ*LGG 137
Score = 110 bits (234), Expect(2) = 4e-071
Identities = 41/56 (73%), Positives = 46/56 (82%)
Frame = -2 / +3
Query: 266 GYGVITNIINGGIECGHGTDPRVTDRIGFYKRYCDVFRIGYGSNLDCDGQRPFNSG 99
GYGVITN+INGGIECG G + +V DRIGFYKRYCD+F IGYG+NLDC Q FN G
Sbjct: 429 GYGVITNVINGGIECGKGQNDKVADRIGFYKRYCDIFGIGYGNNLDCYNQLSFNIG 596
Score = 90.9 bits (192), Expect(2) = 1e-036
Identities = 41/58 (70%), Positives = 42/58 (72%)
Frame = +1 / -1
Query: 97 SPLLKGLWPSQSRLLP*PMRKTSQ*RL*KPIRSVTRGSVPCPHSIPPLMMLVITPYPG 270
SP+L W QSRL P*PM K SQ*RL* PIRS T P PHSIPPLM LVITPYPG
Sbjct: 598 SPMLNDNWL*QSRLFP*PMPKMSQ*RL*NPIRSATLSFCPLPHSIPPLMTLVITPYPG 425
Score = 82.2 bits (173), Expect(2) = 1e-036
Identities = 40/75 (53%), Positives = 44/75 (58%)
Frame = +3 / -3
Query: 276 PAGRPVRSRGRPLPRDHGVARRLVVPRVHPEPQRCLEGYHGXXXXXXXXXXXXHADGSPR 455
P+GR V R P PRDH VARRLV R HPEP R LE + H D PR
Sbjct: 422 PSGRAVPGRRPPQPRDHVVARRLVGLRRHPEPNRRLERHRRVRRHQVRVVQQVHPDRPPR 243
Query: 456 RAVVVVEGDLDGAAA 500
R+VVVV G+LDGAAA
Sbjct: 242 RSVVVVVGELDGAAA 198
Score = 80.8 bits (170), Expect(2) = 6e-026
Identities = 33/53 (62%), Positives = 40/53 (75%)
Frame = +3 / -3
Query: 105 IEGPLAVAIEIAPVADAEDIAVALVEANPVGDPGVRPVPALDPTVDDVGDHAV 263
+E L VA+E+ PVADAED+ VALVE +PVG V P+ A DP +DDVGDHAV
Sbjct: 590 VERQLVVAVEVIPVADAEDVTVALVEPDPVGHLVVLPLAAFDPAIDDVGDHAV 432
Score = 56.1 bits (116), Expect(2) = 6e-026
Identities = 25/37 (67%), Positives = 26/37 (70%)
Frame = +2 / -2
Query: 260 RTLARPGRPPCPQPWASTAP*SRRGTTACCPARSSRT 370
R + P RP CP P AST P*SRRGTTAC A SSRT
Sbjct: 438 RRIRVPVRPRCPWPSASTTP*SRRGTTACWTASSSRT 328
>gb|BE454845.1|BE454845 HVSMEh0095E05f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0095E05f, mRNA sequence
Length = 717
Score = 171 bits (367), Expect(2) = 1e-070
Identities = 63/87 (72%), Positives = 71/87 (81%)
Frame = -2 / -2
Query: 569 RNPPSDYCEPRPQWPCAPGKKYFGRGPIQISFNYNYGPAGRAIGVDLLNNPDLVATDPVI 390
R SDYC P QWPCAPGK+Y+GRGPI++S NYN GPAGRAIGVDLL NPDLVATD +
Sbjct: 617 RGASSDYCTPSAQWPCAPGKRYYGRGPIKLSHNYNNGPAGRAIGVDLLANPDLVATDATV 438
Query: 389 SFKTALWFWMNARDNKPSCHAVITGQW 309
+FKTA+WFWM A+ KPS HAVI GQW
Sbjct: 437 AFKTAIWFWMTAQPPKPSSHAVIAGQW 357
Score = 131 bits (281), Expect = 3e-030
Identities = 64/108 (59%), Positives = 70/108 (64%)
Frame = +1 / +1
Query: 235 PLMMLVITPYPGAPRPAALSAAVGVHCPVITAWHDGLLSRAFIQNHSAVLKDITGSVATR 414
P +M+++ RPAA SA G+H P ITAW DGL A IQN AVL SVATR
Sbjct: 283 PPLMMLVITPNPGTRPAARSAPDGLHWPAITAWLDGLGGCAVIQNQMAVLNATVASVATR 462
Query: 415 SGLLRRSTPMARPAGP*L*LKEIWMGPRPKYFLPGAHGHCGRGSQ*SD 558
SGL RSTPMARPAGP L*L E MGPRP PGAHGHC G Q*S+
Sbjct: 463 SGLASRSTPMARPAGPLL*LWESLMGPRP**RXPGAHGHCALGVQ*SE 606
Score = 115 bits (246), Expect(2) = 1e-070
Identities = 42/53 (79%), Positives = 46/53 (86%)
Frame = -2 / -2
Query: 266 GYGVITNIINGGIECGHGTDPRVTDRIGFYKRYCDVFRIGYGSNLDCDGQRPF 108
G+GVITNIINGGIECGHG D RV DRIGFYKRYCD+ +GYG+NLDC QRPF
Sbjct: 317 GFGVITNIINGGIECGHGQDSRVADRIGFYKRYCDILGVGYGNNLDCYSQRPF 159
Score = 90.9 bits (192), Expect(2) = 2e-028
Identities = 42/54 (77%), Positives = 43/54 (79%)
Frame = +1 / +1
Query: 109 KGLWPSQSRLLP*PMRKTSQ*RL*KPIRSVTRGSVPCPHSIPPLMMLVITPYPG 270
KGLW QSRLLP*P + SQ*RL* PIRS TR S P PHSIPPLMMLVITP PG
Sbjct: 160 KGLWL*QSRLLP*PTPRMSQ*RL*NPIRSATRLSCP*PHSIPPLMMLVITPNPG 321
Score = 54.2 bits (112), Expect(2) = 2e-028
Identities = 29/75 (38%), Positives = 36/75 (48%)
Frame = +3 / +3
Query: 276 PAGRPVRSRGRPLPRDHGVARRLVVPRVHPEPQRCLEGYHGXXXXXXXXXXXXHADGSPR 455
P PV PL DH +ARRL R HPEP L+ + G DG
Sbjct: 324 PPCGPVSP*RAPLAGDHSMARRLGRLRRHPEPDGRLKRHSGVRGHQVRVGQQIDPDGPAG 503
Query: 456 RAVVVVEGDLDGAAA 500
R+++VV G+LDG AA
Sbjct: 504 RSIIVVVGELDGPAA 548
>gb|BG417971.1|BG417971 HVSMEk0020F20f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0020F20f, mRNA sequence
Length = 468
Score = 168 bits (362), Expect(2) = 5e-070
Identities = 62/83 (74%), Positives = 69/83 (83%)
Frame = -2 / +1
Query: 557 SDYCEPRPQWPCAPGKKYFGRGPIQISFNYNYGPAGRAIGVDLLNNPDLVATDPVISFKT 378
SDYC P QWPCAPGK+Y+GR P Q+S NYNYGPAGRAIGVDLL NPDLVATD ++FKT
Sbjct: 1 SDYCTPSAQWPCAPGKRYYGRRPNQLSHNYNYGPAGRAIGVDLLANPDLVATDATVAFKT 180
Query: 377 ALWFWMNARDNKPSCHAVITGQW 309
A+WFWM A+ KPS HAVI GQW
Sbjct: 181 AIWFWMTAQPPKPSSHAVIAGQW 249
Score = 127 bits (271), Expect = 7e-029
Identities = 63/107 (58%), Positives = 69/107 (64%)
Frame = +1 / -2
Query: 235 PLMMLVITPYPGAPRPAALSAAVGVHCPVITAWHDGLLSRAFIQNHSAVLKDITGSVATR 414
P +M+++ RPAA SA G+H P ITAW DGL A IQN AVL SVATR
Sbjct: 323 PPLMMLVITPNPGTRPAARSAPDGLHWPAITAWLDGLGGCAVIQNQMAVLNATVASVATR 144
Query: 415 SGLLRRSTPMARPAGP*L*LKEIWMGPRPKYFLPGAHGHCGRGSQ*S 555
SGL RSTPMARPAGP*L*L E +G RP PGAHGHC G Q*S
Sbjct: 143 SGLASRSTPMARPAGP*L*LWES*LGRRP**RFPGAHGHCALGVQ*S 3
Score = 115 bits (246), Expect(2) = 5e-070
Identities = 42/53 (79%), Positives = 46/53 (86%)
Frame = -2 / +1
Query: 266 GYGVITNIINGGIECGHGTDPRVTDRIGFYKRYCDVFRIGYGSNLDCDGQRPF 108
G+GVITNIINGGIECGHG D RV DRIGFYKRYCD+ +GYG+NLDC QRPF
Sbjct: 289 GFGVITNIINGGIECGHGQDSRVADRIGFYKRYCDILGVGYGNNLDCYSQRPF 447
Score = 90.9 bits (192), Expect(2) = 1e-026
Identities = 42/54 (77%), Positives = 43/54 (79%)
Frame = +1 / -2
Query: 109 KGLWPSQSRLLP*PMRKTSQ*RL*KPIRSVTRGSVPCPHSIPPLMMLVITPYPG 270
KGLW QSRLLP*P + SQ*RL* PIRS TR S P PHSIPPLMMLVITP PG
Sbjct: 446 KGLWL*QSRLLP*PTPRMSQ*RL*NPIRSATRLSCP*PHSIPPLMMLVITPNPG 285
Score = 48.3 bits (99), Expect(2) = 1e-026
Identities = 28/75 (37%), Positives = 34/75 (45%)
Frame = +3 / -1
Query: 276 PAGRPVRSRGRPLPRDHGVARRLVVPRVHPEPQRCLEGYHGXXXXXXXXXXXXHADGSPR 455
P PV PL DH +ARRL R HPEP L+ + G DG
Sbjct: 282 PPCGPVSP*RAPLAGDHSMARRLGRLRRHPEPDGRLKRHSGVRGHQVRVGQQIDPDGPAG 103
Query: 456 RAVVVVEGDLDGAAA 500
R++VVV G+L G A
Sbjct: 102 RSIVVVVGELIGPPA 58
>gb|AV926193.1|AV926193 AV926193 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd18h03 5', mRNA sequence
Length = 511
Score = 177 bits (382), Expect(2) = 2e-069
Identities = 62/87 (71%), Positives = 72/87 (82%)
Frame = -2 / +2
Query: 569 RNPPSDYCEPRPQWPCAPGKKYFGRGPIQISFNYNYGPAGRAIGVDLLNNPDLVATDPVI 390
R P YC+ WPCAPGK+Y+GRGPIQ++ NYNYGPAGRAIGVDLLNNPDLVA+DP +
Sbjct: 62 RGSPPSYCDQSADWPCAPGKQYYGRGPIQLTHNYNYGPAGRAIGVDLLNNPDLVASDPTV 241
Query: 389 SFKTALWFWMNARDNKPSCHAVITGQW 309
+FKTA+WFWM + NKPSCH VITG W
Sbjct: 242 AFKTAIWFWMTTQSNKPSCHDVITGLW 322
Score = 142 bits (305), Expect = 1e-033
Identities = 67/109 (61%), Positives = 73/109 (66%)
Frame = +1 / -2
Query: 235 PLMMLVITPYPGAPRPAALSAAVGVHCPVITAWHDGLLSRAFIQNHSAVLKDITGSVATR 414
P +M ++ RPAALS AVG+H PVIT+WHDGLL IQN AVL GS ATR
Sbjct: 396 PPLMTLVITPYPGTRPAALSLAVGLHNPVITSWHDGLLDCVVIQNQIAVLNATVGSDATR 217
Query: 415 SGLLRRSTPMARPAGP*L*LKEIWMGPRPKYFLPGAHGHCGRGSQ*SDG 561
SGL RSTP+ARPAGP*L*L WMGPRP Y LPGAHG SQ* G
Sbjct: 216 SGLFSRSTPIARPAGP*L*LWVSWMGPRP*YCLPGAHGQSALWSQ*LGG 70
Score = 104 bits (221), Expect(2) = 2e-069
Identities = 38/50 (76%), Positives = 43/50 (86%)
Frame = -2 / +2
Query: 266 GYGVITNIINGGIECGHGTDPRVTDRIGFYKRYCDVFRIGYGSNLDCDGQ 117
GYGVITN+INGGIECG G + +V DRIGFYKRYCD+F IGYG+NLDC Q
Sbjct: 362 GYGVITNVINGGIECGKGQNDKVADRIGFYKRYCDIFGIGYGNNLDCYNQ 511
Score = 84.9 bits (179), Expect(2) = 6e-035
Identities = 38/51 (74%), Positives = 38/51 (74%)
Frame = +1 / -2
Query: 118 WPSQSRLLP*PMRKTSQ*RL*KPIRSVTRGSVPCPHSIPPLMMLVITPYPG 270
W QSRL P*PM K SQ*RL* PIRS T P PHSIPPLM LVITPYPG
Sbjct: 510 WL*QSRLFP*PMPKMSQ*RL*NPIRSATLSFCPLPHSIPPLMTLVITPYPG 358
Score = 82.2 bits (173), Expect(2) = 6e-035
Identities = 40/75 (53%), Positives = 44/75 (58%)
Frame = +3 / -1
Query: 276 PAGRPVRSRGRPLPRDHGVARRLVVPRVHPEPQRCLEGYHGXXXXXXXXXXXXHADGSPR 455
P+GR V R P PRDH VARRLV R HPEP R LE + H D PR
Sbjct: 355 PSGRAVPGRRPPQPRDHVVARRLVGLRRHPEPNRRLERHRRVRRHQVRVVQQVHPDRPPR 176
Query: 456 RAVVVVEGDLDGAAA 500
R+VVVV G+LDGAAA
Sbjct: 175 RSVVVVVGELDGAAA 131
Score = 78.5 bits (165), Expect(2) = 3e-025
Identities = 32/49 (65%), Positives = 38/49 (77%)
Frame = +3 / -1
Query: 117 LAVAIEIAPVADAEDIAVALVEANPVGDPGVRPVPALDPTVDDVGDHAV 263
L VA+E+ PVADAED+ VALVE +PVG V P+ A DP +DDVGDHAV
Sbjct: 511 LVVAVEVIPVADAEDVTVALVEPDPVGHLVVLPLAAFDPAIDDVGDHAV 365
Score = 56.1 bits (116), Expect(2) = 3e-025
Identities = 25/37 (67%), Positives = 26/37 (70%)
Frame = +2 / -3
Query: 260 RTLARPGRPPCPQPWASTAP*SRRGTTACCPARSSRT 370
R + P RP CP P AST P*SRRGTTAC A SSRT
Sbjct: 371 RRIRVPVRPRCPWPSASTTP*SRRGTTACWTASSSRT 261
>gb|BG365157.2|BG365157 HVSMEi0001I15f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0001I15f, mRNA sequence
Length = 937
Score = 174 bits (375), Expect(2) = 5e-069
Identities = 65/87 (74%), Positives = 71/87 (81%)
Frame = -2 / +1
Query: 569 RNPPSDYCEPRPQWPCAPGKKYFGRGPIQISFNYNYGPAGRAIGVDLLNNPDLVATDPVI 390
R +YC P QWPCAPGK Y+ RGPIQ+S NYNYGPAGRAIGVDLL NPDLVATDP +
Sbjct: 67 RGATYNYCTPSAQWPCAPGKSYYCRGPIQLSHNYNYGPAGRAIGVDLLRNPDLVATDPTV 246
Query: 389 SFKTALWFWMNARDNKPSCHAVITGQW 309
SFKTA+WFWM A+ KPS HAVITGQW
Sbjct: 247 SFKTAMWFWMTAQAPKPSSHAVITGQW 327
Score = 140 bits (301), Expect = 5e-033
Identities = 65/106 (61%), Positives = 72/106 (67%)
Frame = +1 / -3
Query: 235 PLMMLVITPYPGAPRPAALSAAVGVHCPVITAWHDGLLSRAFIQNHSAVLKDITGSVATR 414
P + +++ RPAA S G+H PVITAW DG + A IQNH AVL D GSVATR
Sbjct: 401 PPLTMLVITPNPGTRPAARSVHDGLHWPVITAWLDGFGAWAVIQNHIAVLNDTVGSVATR 222
Query: 415 SGLLRRSTPMARPAGP*L*LKEIWMGPRPKYFLPGAHGHCGRGSQ* 552
SGL RRSTPMARPAGP*L*L E W+GPR PGAHGHC G Q*
Sbjct: 221 SGLRRRSTPMARPAGP*L*LWESWIGPRQ**LFPGAHGHCALGVQ* 84
Score = 106 bits (226), Expect(2) = 5e-069
Identities = 38/53 (71%), Positives = 43/53 (81%)
Frame = -2 / +1
Query: 266 GYGVITNIINGGIECGHGTDPRVTDRIGFYKRYCDVFRIGYGSNLDCDGQRPF 108
G+GVITNI+NGGIECGHG D RV DRIGFYKRYCD+ +GY +NLDC PF
Sbjct: 367 GFGVITNIVNGGIECGHGQDSRVADRIGFYKRYCDILGVGYCNNLDCFNHEPF 525
Score = 90.0 bits (190), Expect(2) = 8e-024
Identities = 40/55 (72%), Positives = 42/55 (76%)
Frame = +1 / -3
Query: 106 LKGLWPSQSRLLP*PMRKTSQ*RL*KPIRSVTRGSVPCPHSIPPLMMLVITPYPG 270
+KG W QSRLL *P + SQ*RL* PIRS TR S PCPHSIPPL MLVITP PG
Sbjct: 527 VKGSWLKQSRLLQ*PTPRMSQ*RL*NPIRSATRLSCPCPHSIPPLTMLVITPNPG 363
Score = 39.6 bits (80), Expect(2) = 8e-024
Identities = 19/37 (51%), Positives = 22/37 (59%)
Frame = +3 / -2
Query: 276 PAGRPVRSRGRPLPRDHGVARRLVVPRVHPEPQRCLE 386
PA PVR PL RDH +ARRL HP+P R L+
Sbjct: 360 PARCPVRP*WAPLARDHSMARRLWRLGRHPKPHRSLK 250
>gb|AV926184.1|AV926184 AV926184 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd18g16 5', mRNA sequence
Length = 507
Score = 177 bits (382), Expect(2) = 5e-069
Identities = 62/87 (71%), Positives = 72/87 (82%)
Frame = -2 / +3
Query: 569 RNPPSDYCEPRPQWPCAPGKKYFGRGPIQISFNYNYGPAGRAIGVDLLNNPDLVATDPVI 390
R P YC+ WPCAPGK+Y+GRGPIQ++ NYNYGPAGRAIGVDLLNNPDLVA+DP +
Sbjct: 63 RGSPPSYCDQSADWPCAPGKQYYGRGPIQLTHNYNYGPAGRAIGVDLLNNPDLVASDPTV 242
Query: 389 SFKTALWFWMNARDNKPSCHAVITGQW 309
+FKTA+WFWM + NKPSCH VITG W
Sbjct: 243 AFKTAIWFWMTTQSNKPSCHDVITGLW 323
Score = 142 bits (305), Expect = 1e-033
Identities = 67/109 (61%), Positives = 73/109 (66%)
Frame = +1 / -3
Query: 235 PLMMLVITPYPGAPRPAALSAAVGVHCPVITAWHDGLLSRAFIQNHSAVLKDITGSVATR 414
P +M ++ RPAALS AVG+H PVIT+WHDGLL IQN AVL GS ATR
Sbjct: 397 PPLMTLVITPYPGTRPAALSLAVGLHNPVITSWHDGLLDCVVIQNQIAVLNATVGSDATR 218
Query: 415 SGLLRRSTPMARPAGP*L*LKEIWMGPRPKYFLPGAHGHCGRGSQ*SDG 561
SGL RSTP+ARPAGP*L*L WMGPRP Y LPGAHG SQ* G
Sbjct: 217 SGLFSRSTPIARPAGP*L*LWVSWMGPRP*YCLPGAHGQSALWSQ*LGG 71
Score = 103 bits (219), Expect(2) = 5e-069
Identities = 37/47 (78%), Positives = 42/47 (89%)
Frame = -2 / +3
Query: 266 GYGVITNIINGGIECGHGTDPRVTDRIGFYKRYCDVFRIGYGSNLDC 126
GYGVITN+INGGIECG G + +V DRIGFYKRYCD+F IGYG+NLDC
Sbjct: 363 GYGVITNVINGGIECGKGQNDKVADRIGFYKRYCDIFGIGYGNNLDC 503
Score = 83.1 bits (175), Expect(2) = 2e-034
Identities = 37/48 (77%), Positives = 37/48 (77%)
Frame = +1 / -3
Query: 127 QSRLLP*PMRKTSQ*RL*KPIRSVTRGSVPCPHSIPPLMMLVITPYPG 270
QSRL P*PM K SQ*RL* PIRS T P PHSIPPLM LVITPYPG
Sbjct: 502 QSRLFP*PMPKMSQ*RL*NPIRSATLSFCPLPHSIPPLMTLVITPYPG 359
Score = 82.2 bits (173), Expect(2) = 2e-034
Identities = 40/75 (53%), Positives = 44/75 (58%)
Frame = +3 / -2
Query: 276 PAGRPVRSRGRPLPRDHGVARRLVVPRVHPEPQRCLEGYHGXXXXXXXXXXXXHADGSPR 455
P+GR V R P PRDH VARRLV R HPEP R LE + H D PR
Sbjct: 356 PSGRAVPGRRPPQPRDHVVARRLVGLRRHPEPNRRLERHRRVRRHQVRVVQQVHPDRPPR 177
Query: 456 RAVVVVEGDLDGAAA 500
R+VVVV G+LDGAAA
Sbjct: 176 RSVVVVVGELDGAAA 132
Score = 76.7 bits (161), Expect(2) = 1e-024
Identities = 31/47 (65%), Positives = 37/47 (78%)
Frame = +3 / -2
Query: 123 VAIEIAPVADAEDIAVALVEANPVGDPGVRPVPALDPTVDDVGDHAV 263
VA+E+ PVADAED+ VALVE +PVG V P+ A DP +DDVGDHAV
Sbjct: 506 VAVEVIPVADAEDVTVALVEPDPVGHLVVLPLAAFDPAIDDVGDHAV 366
Score = 56.1 bits (116), Expect(2) = 1e-024
Identities = 25/37 (67%), Positives = 26/37 (70%)
Frame = +2 / -1
Query: 260 RTLARPGRPPCPQPWASTAP*SRRGTTACCPARSSRT 370
R + P RP CP P AST P*SRRGTTAC A SSRT
Sbjct: 372 RRIRVPVRPRCPWPSASTTP*SRRGTTACWTASSSRT 262
>gb|BI949025.1|BI949025 HVSMEl0012B07f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0012B07f, mRNA sequence
Length = 854
Score = 171 bits (369), Expect(2) = 2e-068
Identities = 63/87 (72%), Positives = 71/87 (81%)
Frame = -2 / +3
Query: 569 RNPPSDYCEPRPQWPCAPGKKYFGRGPIQISFNYNYGPAGRAIGVDLLNNPDLVATDPVI 390
R SDYC P QWPCAPGK+Y+GRGPIQ+S NYNYGPAGRAIG +LL NPDLVATD +
Sbjct: 18 RGASSDYCTPSAQWPCAPGKRYYGRGPIQLSHNYNYGPAGRAIGGELLANPDLVATDATV 197
Query: 389 SFKTALWFWMNARDNKPSCHAVITGQW 309
+FKTA+WFWM A+ KPS HAVI GQW
Sbjct: 198 AFKTAIWFWMTAQPPKPSSHAVIAGQW 278
Score = 134 bits (288), Expect = 3e-031
Identities = 64/108 (59%), Positives = 70/108 (64%)
Frame = +1 / -2
Query: 235 PLMMLVITPYPGAPRPAALSAAVGVHCPVITAWHDGLLSRAFIQNHSAVLKDITGSVATR 414
P +M+++ RPAA SA G+H P ITAW DGL A IQN AVL SVATR
Sbjct: 352 PPLMMLVITPNPGTRPAARSAPDGLHWPAITAWLDGLGGCAVIQNQMAVLNATVASVATR 173
Query: 415 SGLLRRSTPMARPAGP*L*LKEIWMGPRPKYFLPGAHGHCGRGSQ*SD 558
SGL S PMARPAGP*L*L E WMGPRP PGAHGHC G Q*S+
Sbjct: 172 SGLASSSPPMARPAGP*L*LWESWMGPRP**RFPGAHGHCALGVQ*SE 29
Score = 106 bits (227), Expect(2) = 2e-068
Identities = 39/53 (73%), Positives = 44/53 (83%)
Frame = -2 / +3
Query: 266 GYGVITNIINGGIECGHGTDPRVTDRIGFYKRYCDVFRIGYGSNLDCDGQRPF 108
G+GVITNIINGGIECGHG D RV DR+GFYKRYCD+ +GYG+NL C QR F
Sbjct: 318 GFGVITNIINGGIECGHGQDSRVADRVGFYKRYCDILGVGYGNNLHCFRQRRF 476
Score = 84.0 bits (177), Expect(2) = 2e-026
Identities = 39/54 (72%), Positives = 39/54 (72%)
Frame = +1 / -2
Query: 109 KGLWPSQSRLLP*PMRKTSQ*RL*KPIRSVTRGSVPCPHSIPPLMMLVITPYPG 270
K LW Q RLLP*P SQ*RL* P RS TR S P PHSIPPLMMLVITP PG
Sbjct: 475 KRLWRKQCRLLP*PTPSMSQ*RL*NPTRSATRLSCP*PHSIPPLMMLVITPNPG 314
Score = 54.2 bits (112), Expect(2) = 2e-026
Identities = 30/75 (40%), Positives = 36/75 (48%)
Frame = +3 / -1
Query: 276 PAGRPVRSRGRPLPRDHGVARRLVVPRVHPEPQRCLEGYHGXXXXXXXXXXXXHADGSPR 455
P PV PL DH +ARRL R HPEP L+ + G DG
Sbjct: 311 PPCGPVSP*RAPLAGDHSMARRLGRLRRHPEPDGRLKRHSGVRGHQVRVGQQLAPDGPAG 132
Query: 456 RAVVVVEGDLDGAAA 500
R++VVV G+LDG AA
Sbjct: 131 RSIVVVVGELDGPAA 87
>gb|BE602548.3|BE602548 HVSMEh0099N16f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0099N16f, mRNA sequence
Length = 730
Score = 178 bits (383), Expect(2) = 4e-068
Identities = 64/84 (76%), Positives = 72/84 (85%)
Frame = -2 / +1
Query: 560 PSDYCEPRPQWPCAPGKKYFGRGPIQISFNYNYGPAGRAIGVDLLNNPDLVATDPVISFK 381
P DYC+P QWPC G++Y+GRGPI +S+NYNYGPAGRAIGVDLLNNPDLVATD +SFK
Sbjct: 100 PPDYCQPSSQWPCVQGRQYYGRGPIMLSWNYNYGPAGRAIGVDLLNNPDLVATDATVSFK 279
Query: 380 TALWFWMNARDNKPSCHAVITGQW 309
TALWFWM + NKPS HAVITGQW
Sbjct: 280 TALWFWMTPQANKPSSHAVITGQW 351
Score = 144 bits (310), Expect = 3e-034
Identities = 71/109 (65%), Positives = 76/109 (69%)
Frame = +1 / -3
Query: 235 PLMMLVITPYPGAPRPAALSAAVGVHCPVITAWHDGLLSRAFIQNHSAVLKDITGSVATR 414
P +M+++ AALSAAVGVH PVITA DGLL+ IQNHSAVLKD SVATR
Sbjct: 425 PPLMMLVMTP*PGTLSAALSAAVGVHWPVITA*EDGLLACGVIQNHSAVLKDTVASVATR 246
Query: 415 SGLLRRSTPMARPAGP*L*LKEIWMGPRPKYFLPGAHGHCGRGSQ*SDG 561
SGLL RSTPMARPAGP*L* E MGPRP Y LP HGH G Q*S G
Sbjct: 245 SGLLSRSTPMARPAGP*L*FHESMMGPRP*YCLPCTHGHWEDGWQ*SGG 99
Score = 99.6 bits (211), Expect(2) = 4e-068
Identities = 35/47 (74%), Positives = 40/47 (85%)
Frame = -2 / +1
Query: 266 GYGVITNIINGGIECGHGTDPRVTDRIGFYKRYCDVFRIGYGSNLDC 126
GYGVITNIINGG+ECG G D RV DRIGFY+RYC++ +GYG NLDC
Sbjct: 391 GYGVITNIINGGLECGRGADSRVADRIGFYQRYCNILDVGYGGNLDC 531
Score = 80.8 bits (170), Expect(2) = 6e-032
Identities = 33/57 (57%), Positives = 44/57 (77%)
Frame = +3 / -2
Query: 93 RQSAIEGPLAVAIEIAPVADAEDIAVALVEANPVGDPGVRPVPALDPTVDDVGDHAV 263
+ + +G VA+E+APVAD +D+AVALVEA+PVG+ VRP AL+P VDDVGD A+
Sbjct: 564 KSPSTKGLWFVAVEVAPVADVKDVAVALVEADPVGNTAVRPPAALEPAVDDVGDDAI 394
Score = 76.2 bits (160), Expect(2) = 6e-032
Identities = 40/75 (53%), Positives = 43/75 (57%)
Frame = +3 / -2
Query: 276 PAGRPVRSRGRPLPRDHGVARRLVVPRVHPEPQRCLEGYHGXXXXXXXXXXXXHADGSPR 455
P R V R RPL RDHGV RLV R HPEP LEG+ G HADG+P
Sbjct: 384 PLRRVVCGRRRPLARDHGVRGRLVGLRRHPEP*CRLEGHGGIRGHQVRVVEQVHADGAPG 205
Query: 456 RAVVVVEGDLDGAAA 500
RAVVVV + DGAAA
Sbjct: 204 RAVVVVP*EHDGAAA 160
>gb|BQ663496.1|BQ663496 HU02O12u HU Hordeum vulgare subsp. vulgare cDNA clone HU02O12
3-PRIME, mRNA sequence
Length = 546
Score = 158 bits (339), Expect(2) = 1e-066
Identities = 59/72 (81%), Positives = 64/72 (88%)
Frame = -2 / -2
Query: 524 CAPGKKYFGRGPIQISFNYNYGPAGRAIGVDLLNNPDLVATDPVISFKTALWFWMNARDN 345
CAPGK Y+GRGPIQ+S NYNYGPAGRAIGVDLL NPDLVATDP +SFKTA+WFWM A+
Sbjct: 545 CAPGKSYYGRGPIQLSHNYNYGPAGRAIGVDLLRNPDLVATDPTVSFKTAMWFWMTAQAP 366
Query: 344 KPSCHAVITGQW 309
KPS HAVITGQW
Sbjct: 365 KPSSHAVITGQW 330
Score = 130 bits (279), Expect = 5e-030
Identities = 60/97 (61%), Positives = 67/97 (69%)
Frame = +1 / +1
Query: 235 PLMMLVITPYPGAPRPAALSAAVGVHCPVITAWHDGLLSRAFIQNHSAVLKDITGSVATR 414
P + +++ RPAA S G+H PVITAW DG + A IQNH AVL D GSVATR
Sbjct: 256 PPLTMLVITPNPGTRPAARSVPDGLHWPVITAWLDGFGAWAVIQNHIAVLNDTVGSVATR 435
Query: 415 SGLLRRSTPMARPAGP*L*LKEIWMGPRPKYFLPGAH 525
SGL RRSTPMARPAGP*L*L E W+GPRP PGAH
Sbjct: 436 SGLRRRSTPMARPAGP*L*LWESWIGPRP**LFPGAH 546
Score = 115 bits (245), Expect(2) = 1e-066
Identities = 41/53 (77%), Positives = 46/53 (86%)
Frame = -2 / -2
Query: 266 GYGVITNIINGGIECGHGTDPRVTDRIGFYKRYCDVFRIGYGSNLDCDGQRPF 108
G+GVITNI+NGGIECGHG D RV DRIGFYKRYCD+ +GYG+NLDC QRPF
Sbjct: 290 GFGVITNIVNGGIECGHGQDSRVADRIGFYKRYCDILGVGYGNNLDCYNQRPF 132
Score = 94.1 bits (199), Expect(2) = 5e-025
Identities = 42/54 (77%), Positives = 43/54 (79%)
Frame = +1 / +1
Query: 109 KGLWPSQSRLLP*PMRKTSQ*RL*KPIRSVTRGSVPCPHSIPPLMMLVITPYPG 270
KGLW QSRLLP*P + SQ*RL* PIRS TR S PCPHSIPPL MLVITP PG
Sbjct: 133 KGLWL*QSRLLP*PTPRMSQ*RL*NPIRSATRLSCPCPHSIPPLTMLVITPNPG 294
Score = 39.6 bits (80), Expect(2) = 5e-025
Identities = 19/37 (51%), Positives = 22/37 (59%)
Frame = +3 / +3
Query: 276 PAGRPVRSRGRPLPRDHGVARRLVVPRVHPEPQRCLE 386
PA PVR PL RDH +ARRL HP+P R L+
Sbjct: 297 PARCPVRP*WAPLARDHSMARRLWRLGRHPKPHRSLK 407
>gb|CA016825.1|CA016825 HV05P04u HV Hordeum vulgare subsp. vulgare cDNA clone HV05P04
3-PRIME, mRNA sequence
Length = 545
Score = 158 bits (339), Expect(2) = 1e-066
Identities = 59/72 (81%), Positives = 64/72 (88%)
Frame = -2 / -2
Query: 524 CAPGKKYFGRGPIQISFNYNYGPAGRAIGVDLLNNPDLVATDPVISFKTALWFWMNARDN 345
CAPGK Y+GRGPIQ+S NYNYGPAGRAIGVDLL NPDLVATDP +SFKTA+WFWM A+
Sbjct: 544 CAPGKSYYGRGPIQLSHNYNYGPAGRAIGVDLLRNPDLVATDPTVSFKTAMWFWMTAQAP 365
Query: 344 KPSCHAVITGQW 309
KPS HAVITGQW
Sbjct: 364 KPSSHAVITGQW 329
Score = 130 bits (279), Expect = 5e-030
Identities = 60/97 (61%), Positives = 67/97 (69%)
Frame = +1 / +3
Query: 235 PLMMLVITPYPGAPRPAALSAAVGVHCPVITAWHDGLLSRAFIQNHSAVLKDITGSVATR 414
P + +++ RPAA S G+H PVITAW DG + A IQNH AVL D GSVATR
Sbjct: 255 PPLTMLVITPNPGTRPAARSVPDGLHWPVITAWLDGFGAWAVIQNHIAVLNDTVGSVATR 434
Query: 415 SGLLRRSTPMARPAGP*L*LKEIWMGPRPKYFLPGAH 525
SGL RRSTPMARPAGP*L*L E W+GPRP PGAH
Sbjct: 435 SGLRRRSTPMARPAGP*L*LWESWIGPRP**LFPGAH 545
Score = 115 bits (245), Expect(2) = 1e-066
Identities = 41/53 (77%), Positives = 46/53 (86%)
Frame = -2 / -2
Query: 266 GYGVITNIINGGIECGHGTDPRVTDRIGFYKRYCDVFRIGYGSNLDCDGQRPF 108
G+GVITNI+NGGIECGHG D RV DRIGFYKRYCD+ +GYG+NLDC QRPF
Sbjct: 289 GFGVITNIVNGGIECGHGQDSRVADRIGFYKRYCDILGVGYGNNLDCYNQRPF 131
Score = 94.1 bits (199), Expect(2) = 5e-025
Identities = 42/54 (77%), Positives = 43/54 (79%)
Frame = +1 / +3
Query: 109 KGLWPSQSRLLP*PMRKTSQ*RL*KPIRSVTRGSVPCPHSIPPLMMLVITPYPG 270
KGLW QSRLLP*P + SQ*RL* PIRS TR S PCPHSIPPL MLVITP PG
Sbjct: 132 KGLWL*QSRLLP*PTPRMSQ*RL*NPIRSATRLSCPCPHSIPPLTMLVITPNPG 293
Score = 39.6 bits (80), Expect(2) = 5e-025
Identities = 19/37 (51%), Positives = 22/37 (59%)
Frame = +3 / +2
Query: 276 PAGRPVRSRGRPLPRDHGVARRLVVPRVHPEPQRCLE 386
PA PVR PL RDH +ARRL HP+P R L+
Sbjct: 296 PARCPVRP*WAPLARDHSMARRLWRLGRHPKPHRSLK 406
>gb|BG365536.1|BG365536 HVSMEi0003B22f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0003B22f, mRNA sequence
Length = 805
Score = 177 bits (380), Expect(2) = 2e-066
Identities = 65/87 (74%), Positives = 72/87 (82%)
Frame = -2 / +3
Query: 569 RNPPSDYCEPRPQWPCAPGKKYFGRGPIQISFNYNYGPAGRAIGVDLLNNPDLVATDPVI 390
R SDYC P QWPCAPGK+Y+GRGPIQ+S NYNYGPAGRAIGVDLL NPDLVATD +
Sbjct: 306 RGASSDYCTPSAQWPCAPGKRYYGRGPIQLSHNYNYGPAGRAIGVDLLANPDLVATDATV 485
Query: 389 SFKTALWFWMNARDNKPSCHAVITGQW 309
+FKTA+WFWM A+ KPS HAVI GQW
Sbjct: 486 AFKTAIWFWMTAQPPKPSSHAVIAGQW 566
Score = 140 bits (300), Expect = 7e-033
Identities = 66/108 (61%), Positives = 72/108 (66%)
Frame = +1 / -1
Query: 235 PLMMLVITPYPGAPRPAALSAAVGVHCPVITAWHDGLLSRAFIQNHSAVLKDITGSVATR 414
P +M+++ RPAA SA G+H P ITAW DGL A IQN AVL SVATR
Sbjct: 640 PPLMMLVITPNPGTRPAARSAPDGLHWPAITAWLDGLGGCAVIQNQMAVLNATVASVATR 461
Query: 415 SGLLRRSTPMARPAGP*L*LKEIWMGPRPKYFLPGAHGHCGRGSQ*SD 558
SGL RSTPMARPAGP*L*L E WMGPRP PGAHGHC G Q*S+
Sbjct: 460 SGLASRSTPMARPAGP*L*LWESWMGPRP**RFPGAHGHCALGVQ*SE 317
Score = 95.5 bits (202), Expect(2) = 2e-066
Identities = 37/52 (71%), Positives = 40/52 (76%)
Frame = -2 / +3
Query: 266 GYGVITNIINGGIECGHGTDPRVTDRIGFYKRYCDVFRIGYGSNLDCDGQRP 111
G+GVITNIINGGIECGHG D RV DRIG YKR D+ +GYG NLDC Q P
Sbjct: 606 GFGVITNIINGGIECGHGQDSRVADRIGLYKRC*DMLGVGYGDNLDCCSQDP 761
Score = 79.4 bits (167), Expect(2) = 4e-025
Identities = 37/53 (69%), Positives = 37/53 (69%)
Frame = +1 / -1
Query: 112 GLWPSQSRLLP*PMRKTSQ*RL*KPIRSVTRGSVPCPHSIPPLMMLVITPYPG 270
G W QSRL P*P SQ RL PIRS TR S P PHSIPPLMMLVITP PG
Sbjct: 760 GSWLQQSRLSP*PTPSMSQQRLYNPIRSATRLSCP*PHSIPPLMMLVITPNPG 602
Score = 54.7 bits (113), Expect(2) = 4e-025
Identities = 30/75 (40%), Positives = 36/75 (48%)
Frame = +3 / -3
Query: 276 PAGRPVRSRGRPLPRDHGVARRLVVPRVHPEPQRCLEGYHGXXXXXXXXXXXXHADGSPR 455
P PV PL DH +ARRL R HPEP L+ + G DG
Sbjct: 599 PPCGPVSP*RAPLAGDHSMARRLGRLRRHPEPDGRLKRHSGVRGHQVRVGQQIDPDGPAG 420
Query: 456 RAVVVVEGDLDGAAA 500
R++VVV G+LDG AA
Sbjct: 419 RSIVVVVGELDGPAA 375
>gb|BG417744.1|BG417744 HVSMEk0019F09f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0019F09f, mRNA sequence
Length = 436
Score = 171 bits (367), Expect(2) = 7e-066
Identities = 63/83 (75%), Positives = 70/83 (84%)
Frame = -2 / +3
Query: 557 SDYCEPRPQWPCAPGKKYFGRGPIQISFNYNYGPAGRAIGVDLLNNPDLVATDPVISFKT 378
SDYC P QW CAPGK+Y+GRGPIQ+S NYNYGPAGRAIGVDLL NPDLVATD ++FKT
Sbjct: 12 SDYCTPSAQWACAPGKRYYGRGPIQLSNNYNYGPAGRAIGVDLLANPDLVATDATVAFKT 191
Query: 377 ALWFWMNARDNKPSCHAVITGQW 309
A+WFWM A+ KPS HAVI GQW
Sbjct: 192 AIWFWMTAQPPKPSSHAVIAGQW 260
Score = 138 bits (295), Expect = 3e-032
Identities = 65/108 (60%), Positives = 71/108 (65%)
Frame = +1 / -1
Query: 235 PLMMLVITPYPGAPRPAALSAAVGVHCPVITAWHDGLLSRAFIQNHSAVLKDITGSVATR 414
P +M+++ RPAA SA G+H P ITAW DGL A IQN AVL SVATR
Sbjct: 334 PPLMMLVITPNPGTRPAARSAPDGLHWPAITAWLDGLGGCAVIQNQMAVLNATVASVATR 155
Query: 415 SGLLRRSTPMARPAGP*L*LKEIWMGPRPKYFLPGAHGHCGRGSQ*SD 558
SGL RSTPMARPAGP*L*L E WMGPRP PGAH HC G Q*S+
Sbjct: 154 SGLASRSTPMARPAGP*L*LLESWMGPRP**RFPGAHAHCALGVQ*SE 11
Score = 99.6 bits (211), Expect(2) = 7e-066
Identities = 36/45 (80%), Positives = 40/45 (88%)
Frame = -2 / +3
Query: 266 GYGVITNIINGGIECGHGTDPRVTDRIGFYKRYCDVFRIGYGSNL 132
G+GVITNIINGGIECGHG D RV DRIGFYKRYCD+ +GYG+NL
Sbjct: 300 GFGVITNIINGGIECGHGQDSRVADRIGFYKRYCDILGVGYGNNL 434
Score = 78.0 bits (164), Expect(2) = 6e-023
Identities = 36/46 (78%), Positives = 37/46 (80%)
Frame = +1 / -1
Query: 133 RLLP*PMRKTSQ*RL*KPIRSVTRGSVPCPHSIPPLMMLVITPYPG 270
RLLP*P + SQ*RL* PIRS TR S P PHSIPPLMMLVITP PG
Sbjct: 433 RLLP*PTPRMSQ*RL*NPIRSATRLSCP*PHSIPPLMMLVITPNPG 296
Score = 48.7 bits (100), Expect(2) = 6e-023
Identities = 28/75 (37%), Positives = 34/75 (45%)
Frame = +3 / -3
Query: 276 PAGRPVRSRGRPLPRDHGVARRLVVPRVHPEPQRCLEGYHGXXXXXXXXXXXXHADGSPR 455
P PV PL DH +A RL R HPEP + + G DG
Sbjct: 293 PPCGPVSP*RAPLAGDHSMA*RLGRLRRHPEPDGRFKRHSGVRGHQVRVGQQIDPDGPAG 114
Query: 456 RAVVVVEGDLDGAAA 500
R++VVV G+LDG AA
Sbjct: 113 RSIVVVVGELDGPAA 69
>gb|AV931065.1|AV931065 AV931065 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd18g16 3', mRNA sequence
Length = 650
Score = 149 bits (319), Expect(2) = 2e-064
Identities = 53/69 (76%), Positives = 62/69 (89%)
Frame = -2 / -2
Query: 515 GKKYFGRGPIQISFNYNYGPAGRAIGVDLLNNPDLVATDPVISFKTALWFWMNARDNKPS 336
GK+Y+GRGPIQ++ NYNYGPAGRAIGVDLLNNPDLVA+DP ++FKTA+WFWM + NKPS
Sbjct: 649 GKQYYGRGPIQLTHNYNYGPAGRAIGVDLLNNPDLVASDPTVAFKTAIWFWMTTQSNKPS 470
Query: 335 CHAVITGQW 309
CH VITG W
Sbjct: 469 CHDVITGLW 443
Score = 127 bits (273), Expect = 3e-029
Identities = 59/94 (62%), Positives = 65/94 (69%)
Frame = +1 / +3
Query: 235 PLMMLVITPYPGAPRPAALSAAVGVHCPVITAWHDGLLSRAFIQNHSAVLKDITGSVATR 414
P +M ++ RPAALS AVG+H PVIT+WHDGLL IQN AVL GS ATR
Sbjct: 369 PPLMTLVITPYPGTRPAALSLAVGLHNPVITSWHDGLLDCVVIQNQIAVLNATVGSDATR 548
Query: 415 SGLLRRSTPMARPAGP*L*LKEIWMGPRPKYFLP 516
SGL RSTP+ARPAGP*L*L WMGPRP Y LP
Sbjct: 549 SGLFSRSTPIARPAGP*L*LWVSWMGPRP*YCLP 650
Score = 116 bits (248), Expect(2) = 2e-064
Identities = 44/60 (73%), Positives = 50/60 (83%)
Frame = -2 / -2
Query: 266 GYGVITNIINGGIECGHGTDPRVTDRIGFYKRYCDVFRIGYGSNLDCDGQRPFNSGLAVE 87
GYGVITN+INGGIECG G + +V DRIGFYKRYCD+F IGYG+NLDC Q FN GLAV+
Sbjct: 403 GYGVITNVINGGIECGKGQNDKVADRIGFYKRYCDIFGIGYGNNLDCYNQLSFNIGLAVQ 224
Score = 95.0 bits (201), Expect(2) = 6e-038
Identities = 43/60 (71%), Positives = 44/60 (73%)
Frame = +1 / +3
Query: 91 TASPLLKGLWPSQSRLLP*PMRKTSQ*RL*KPIRSVTRGSVPCPHSIPPLMMLVITPYPG 270
TASP+L W QSRL P*PM K SQ*RL* PIRS T P PHSIPPLM LVITPYPG
Sbjct: 228 TASPMLNDNWL*QSRLFP*PMPKMSQ*RL*NPIRSATLSFCPLPHSIPPLMTLVITPYPG 407
Score = 84.9 bits (179), Expect(2) = 3e-027
Identities = 35/59 (59%), Positives = 44/59 (74%)
Frame = +3 / +2
Query: 87 LNRQSAIEGPLAVAIEIAPVADAEDIAVALVEANPVGDPGVRPVPALDPTVDDVGDHAV 263
L+R+ +E L VA+E+ PVADAED+ VALVE +PVG V P+ A DP +DDVGDHAV
Sbjct: 224 LHREPDVERQLVVAVEVIPVADAEDVTVALVEPDPVGHLVVLPLAAFDPAIDDVGDHAV 400
Score = 82.2 bits (173), Expect(2) = 6e-038
Identities = 40/75 (53%), Positives = 44/75 (58%)
Frame = +3 / +2
Query: 276 PAGRPVRSRGRPLPRDHGVARRLVVPRVHPEPQRCLEGYHGXXXXXXXXXXXXHADGSPR 455
P+GR V R P PRDH VARRLV R HPEP R LE + H D PR
Sbjct: 410 PSGRAVPGRRPPQPRDHVVARRLVGLRRHPEPNRRLERHRRVRRHQVRVVQQVHPDRPPR 589
Query: 456 RAVVVVEGDLDGAAA 500
R+VVVV G+LDGAAA
Sbjct: 590 RSVVVVVGELDGAAA 634
Score = 56.1 bits (116), Expect(2) = 3e-027
Identities = 25/37 (67%), Positives = 26/37 (70%)
Frame = +2 / +1
Query: 260 RTLARPGRPPCPQPWASTAP*SRRGTTACCPARSSRT 370
R + P RP CP P AST P*SRRGTTAC A SSRT
Sbjct: 394 RRIRVPVRPRCPWPSASTTP*SRRGTTACWTASSSRT 504
>gb|CA012187.1|CA012187 HT04K16r HT Hordeum vulgare subsp. vulgare cDNA clone HT04K16
5-PRIME, mRNA sequence
Length = 447
Score = 177 bits (380), Expect(2) = 2e-063
Identities = 65/87 (74%), Positives = 72/87 (82%)
Frame = -2 / +1
Query: 569 RNPPSDYCEPRPQWPCAPGKKYFGRGPIQISFNYNYGPAGRAIGVDLLNNPDLVATDPVI 390
R SDYC P QWPCAPGK+Y+GRGPIQ+S NYNYGPAGRAIGVDLL NPDLVATD +
Sbjct: 37 RGASSDYCTPSAQWPCAPGKRYYGRGPIQLSHNYNYGPAGRAIGVDLLANPDLVATDATV 216
Query: 389 SFKTALWFWMNARDNKPSCHAVITGQW 309
+FKTA+WFWM A+ KPS HAVI GQW
Sbjct: 217 AFKTAIWFWMTAQPPKPSSHAVIAGQW 297
Score = 138 bits (296), Expect = 2e-032
Identities = 65/108 (60%), Positives = 72/108 (66%)
Frame = +1 / -2
Query: 235 PLMMLVITPYPGAPRPAALSAAVGVHCPVITAWHDGLLSRAFIQNHSAVLKDITGSVATR 414
P +M+++ RPAA SA G+H P ITAW DGL A IQN AVL SVATR
Sbjct: 371 PPLMMLVITPNPGTRPAARSAPDGLHWPAITAWLDGLGGCAVIQNQMAVLNATVASVATR 192
Query: 415 SGLLRRSTPMARPAGP*L*LKEIWMGPRPKYFLPGAHGHCGRGSQ*SD 558
SGL RSTPMARPAGP*L*L E W+GPRP PGAHGHC G Q*S+
Sbjct: 191 SGLASRSTPMARPAGP*L*LWESWIGPRP**RFPGAHGHCALGVQ*SE 48
Score = 85.4 bits (180), Expect(2) = 2e-063
Identities = 31/36 (86%), Positives = 33/36 (91%)
Frame = -2 / +1
Query: 266 GYGVITNIINGGIECGHGTDPRVTDRIGFYKRYCDV 159
G+GVITNIINGGIECGHG D RV DRIGFYKRYCD+
Sbjct: 337 GFGVITNIINGGIECGHGQDSRVADRIGFYKRYCDI 444
>gb|BM096890.2|BM096890 EBma08_SQ001_O17_R maternal, 28 DPA, no treatment, cv Optic, EBma08
Hordeum vulgare subsp. vulgare cDNA clone
EBma08_SQ001_O17 5', mRNA sequence
Length = 486
Score = 142 bits (304), Expect(2) = 5e-062
Identities = 53/69 (76%), Positives = 60/69 (86%)
Frame = -2 / +1
Query: 515 GKKYFGRGPIQISFNYNYGPAGRAIGVDLLNNPDLVATDPVISFKTALWFWMNARDNKPS 336
GK+Y+GRGPIQ+S NYNYGPAGRAIGVDLL NPDLVATD ++FKTA+WFWM A+ KPS
Sbjct: 1 GKRYYGRGPIQLSHNYNYGPAGRAIGVDLLANPDLVATDATVAFKTAIWFWMTAQPPKPS 180
Query: 335 CHAVITGQW 309
HAVI GQW
Sbjct: 181 SHAVIAGQW 207
Score = 115 bits (246), Expect(2) = 5e-062
Identities = 42/53 (79%), Positives = 46/53 (86%)
Frame = -2 / +1
Query: 266 GYGVITNIINGGIECGHGTDPRVTDRIGFYKRYCDVFRIGYGSNLDCDGQRPF 108
G+GVITNIINGGIECGHG D RV DRIGFYKRYCD+ +GYG+NLDC QRPF
Sbjct: 247 GFGVITNIINGGIECGHGQDSRVADRIGFYKRYCDILGVGYGNNLDCYSQRPF 405
Score = 115 bits (245), Expect = 3e-025
Identities = 54/89 (60%), Positives = 60/89 (67%)
Frame = +1 / -2
Query: 235 PLMMLVITPYPGAPRPAALSAAVGVHCPVITAWHDGLLSRAFIQNHSAVLKDITGSVATR 414
P +M+++ RPAA SA G+H P ITAW DGL A IQN AVL SVATR
Sbjct: 281 PPLMMLVITPNPGTRPAARSAPDGLHWPAITAWLDGLGGCAVIQNQMAVLNATVASVATR 102
Query: 415 SGLLRRSTPMARPAGP*L*LKEIWMGPRP 501
SGL RSTPMARPAGP*L*L E W+GPRP
Sbjct: 101 SGLASRSTPMARPAGP*L*LWESWIGPRP 15
Score = 90.9 bits (192), Expect(2) = 2e-026
Identities = 42/54 (77%), Positives = 43/54 (79%)
Frame = +1 / -2
Query: 109 KGLWPSQSRLLP*PMRKTSQ*RL*KPIRSVTRGSVPCPHSIPPLMMLVITPYPG 270
KGLW QSRLLP*P + SQ*RL* PIRS TR S P PHSIPPLMMLVITP PG
Sbjct: 404 KGLWL*QSRLLP*PTPRMSQ*RL*NPIRSATRLSCP*PHSIPPLMMLVITPNPG 243
Score = 47.3 bits (97), Expect(2) = 2e-026
Identities = 28/75 (37%), Positives = 34/75 (45%)
Frame = +3 / -1
Query: 276 PAGRPVRSRGRPLPRDHGVARRLVVPRVHPEPQRCLEGYHGXXXXXXXXXXXXHADGSPR 455
P PV PL DH +AR L R HPEP L+ + G DG
Sbjct: 240 PPCGPVSP*RAPLAGDHSMARWLGRLRRHPEPDGRLKRHSGVRGHQVRVGQQIDPDGPAG 61
Query: 456 RAVVVVEGDLDGAAA 500
R++VVV G+LD AA
Sbjct: 60 RSIVVVVGELDRPAA 16
>gb|BG369358.2|BG369358 HVSMEi0024B14f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0024B14f, mRNA sequence
Length = 904
Score = 177 bits (380), Expect(2) = 2e-061
Identities = 65/87 (74%), Positives = 72/87 (82%)
Frame = -2 / +3
Query: 569 RNPPSDYCEPRPQWPCAPGKKYFGRGPIQISFNYNYGPAGRAIGVDLLNNPDLVATDPVI 390
R SDYC P QWPCAPGK+Y+GRGPIQ+S NYNYGPAGRAIGVDLL NPDLVATD +
Sbjct: 42 RGASSDYCTPSAQWPCAPGKRYYGRGPIQLSHNYNYGPAGRAIGVDLLANPDLVATDATV 221
Query: 389 SFKTALWFWMNARDNKPSCHAVITGQW 309
+FKTA+WFWM A+ KPS HAVI GQW
Sbjct: 222 AFKTAIWFWMTAQPPKPSSHAVIAGQW 302
Score = 140 bits (300), Expect = 7e-033
Identities = 66/108 (61%), Positives = 72/108 (66%)
Frame = +1 / -1
Query: 235 PLMMLVITPYPGAPRPAALSAAVGVHCPVITAWHDGLLSRAFIQNHSAVLKDITGSVATR 414
P +M+++ RPAA SA G+H P ITAW DGL A IQN AVL SVATR
Sbjct: 376 PPLMMLVITPNPGTRPAARSAPDGLHWPAITAWLDGLGGCAVIQNQMAVLNATVASVATR 197
Query: 415 SGLLRRSTPMARPAGP*L*LKEIWMGPRPKYFLPGAHGHCGRGSQ*SD 558
SGL RSTPMARPAGP*L*L E WMGPRP PGAHGHC G Q*S+
Sbjct: 196 SGLASRSTPMARPAGP*L*LWESWMGPRP**RFPGAHGHCALGVQ*SE 53
Score = 78.5 bits (165), Expect(2) = 2e-061
Identities = 33/53 (62%), Positives = 37/53 (69%)
Frame = -2 / +3
Query: 266 GYGVITNIINGGIECGHGTDPRVTDRIGFYKRYCDVFRIGYGSNLDCDGQRPF 108
G+GVITNIINGGIECGHG D RV DRI Y+R D+ G G NL C RP+
Sbjct: 342 GFGVITNIINGGIECGHGQDSRVADRIRGYRRC*DMLGGGCGGNLGCCRARPW 500
Score = 72.1 bits (151), Expect(2) = 6e-023
Identities = 35/54 (64%), Positives = 36/54 (66%)
Frame = +1 / -1
Query: 109 KGLWPSQSRLLP*PMRKTSQ*RL*KPIRSVTRGSVPCPHSIPPLMMLVITPYPG 270
+GL Q RL P P SQ RL IRS TR S PCPHSIPPLMMLVITP PG
Sbjct: 499 QGLALQQPRLPPQPPPSMSQQRLYPRIRSATRLSCPCPHSIPPLMMLVITPNPG 338
Score = 54.7 bits (113), Expect(2) = 6e-023
Identities = 30/75 (40%), Positives = 36/75 (48%)
Frame = +3 / -3
Query: 276 PAGRPVRSRGRPLPRDHGVARRLVVPRVHPEPQRCLEGYHGXXXXXXXXXXXXHADGSPR 455
P PV PL DH +ARRL R HPEP L+ + G DG
Sbjct: 335 PPCGPVSP*RAPLAGDHSMARRLGRLRRHPEPDGRLKRHSGVRGHQVRVGQQIDPDGPAG 156
Query: 456 RAVVVVEGDLDGAAA 500
R++VVV G+LDG AA
Sbjct: 155 RSIVVVVGELDGPAA 111
>gb|BM371442.2|BM371442 EBma08_SQ002_M02_R maternal, 28 DPA, no treatment, cv Optic, EBma08
Hordeum vulgare subsp. vulgare cDNA clone
EBma08_SQ002_M02 5', mRNA sequence
Length = 548
Score = 139 bits (298), Expect(2) = 3e-061
Identities = 52/68 (76%), Positives = 59/68 (86%)
Frame = -2 / +3
Query: 512 KKYFGRGPIQISFNYNYGPAGRAIGVDLLNNPDLVATDPVISFKTALWFWMNARDNKPSC 333
K+Y+GRGPIQ+S NYNYGPAGRAIGVDLL NPDLVATD ++FKTA+WFWM A+ KPS
Sbjct: 3 KRYYGRGPIQLSHNYNYGPAGRAIGVDLLANPDLVATDATVAFKTAIWFWMTAQPPKPSS 182
Query: 332 HAVITGQW 309
HAVI GQW
Sbjct: 183 HAVIAGQW 206
Score = 115 bits (246), Expect(2) = 3e-061
Identities = 42/53 (79%), Positives = 46/53 (86%)
Frame = -2 / +3
Query: 266 GYGVITNIINGGIECGHGTDPRVTDRIGFYKRYCDVFRIGYGSNLDCDGQRPF 108
G+GVITNIINGGIECGHG D RV DRIGFYKRYCD+ +GYG+NLDC QRPF
Sbjct: 246 GFGVITNIINGGIECGHGQDSRVADRIGFYKRYCDILGVGYGNNLDCYSQRPF 404
Score = 115 bits (245), Expect = 3e-025
Identities = 54/89 (60%), Positives = 60/89 (67%)
Frame = +1 / -2
Query: 235 PLMMLVITPYPGAPRPAALSAAVGVHCPVITAWHDGLLSRAFIQNHSAVLKDITGSVATR 414
P +M+++ RPAA SA G+H P ITAW DGL A IQN AVL SVATR
Sbjct: 280 PPLMMLVITPNPGTRPAARSAPDGLHWPAITAWLDGLGGCAVIQNQMAVLNATVASVATR 101
Query: 415 SGLLRRSTPMARPAGP*L*LKEIWMGPRP 501
SGL RSTPMARPAGP*L*L E W+GPRP
Sbjct: 100 SGLASRSTPMARPAGP*L*LWESWIGPRP 14
Score = 90.9 bits (192), Expect(2) = 2e-026
Identities = 42/54 (77%), Positives = 43/54 (79%)
Frame = +1 / -2
Query: 109 KGLWPSQSRLLP*PMRKTSQ*RL*KPIRSVTRGSVPCPHSIPPLMMLVITPYPG 270
KGLW QSRLLP*P + SQ*RL* PIRS TR S P PHSIPPLMMLVITP PG
Sbjct: 403 KGLWL*QSRLLP*PTPRMSQ*RL*NPIRSATRLSCP*PHSIPPLMMLVITPNPG 242
Score = 47.3 bits (97), Expect(2) = 2e-026
Identities = 28/75 (37%), Positives = 34/75 (45%)
Frame = +3 / -1
Query: 276 PAGRPVRSRGRPLPRDHGVARRLVVPRVHPEPQRCLEGYHGXXXXXXXXXXXXHADGSPR 455
P PV PL DH +AR L R HPEP L+ + G DG
Sbjct: 239 PPCGPVSP*RAPLAGDHSMARWLGRLRRHPEPDGRLKRHSGVRGHQVRVGQQIDPDGPAG 60
Query: 456 RAVVVVEGDLDGAAA 500
R++VVV G+LD AA
Sbjct: 59 RSIVVVVGELDRPAA 15
>gb|CB876675.1|CB876675 HP02A05T HP Hordeum vulgare subsp. vulgare cDNA clone HP02A05
5-PRIME, mRNA sequence
Length = 639
Score = 182 bits (392), Expect(2) = 1e-060
Identities = 64/84 (76%), Positives = 75/84 (89%)
Frame = -2 / +1
Query: 560 PSDYCEPRPQWPCAPGKKYFGRGPIQISFNYNYGPAGRAIGVDLLNNPDLVATDPVISFK 381
P YC+P+P+WPCAPGKKY+GRGP+Q+S+NYNYG AGRAIGVDLLNNPDLVATD +SFK
Sbjct: 244 PGSYCDPKPEWPCAPGKKYYGRGPMQLSWNYNYGQAGRAIGVDLLNNPDLVATDATVSFK 423
Query: 380 TALWFWMNARDNKPSCHAVITGQW 309
ALWFW+ A+ NKP+ HAVITGQW
Sbjct: 424 AALWFWVTAQANKPASHAVITGQW 495
Score = 135 bits (290), Expect(2) = 1e-041
Identities = 65/106 (61%), Positives = 73/106 (68%)
Frame = +1 / -2
Query: 244 MLVITPYPGAPRPAALSAAVGVHCPVITAWHDGLLSRAFIQNHSAVLKDITGSVATRSGL 423
M+++ RPAALSA GVH PVITA GL + A QNH+A L + SVATRSGL
Sbjct: 560 MMLVMTPYAGTRPAALSAPDGVH*PVITACDAGLFA*AVTQNHNAALNETVASVATRSGL 381
Query: 424 LRRSTPMARPAGP*L*LKEIWMGPRPKYFLPGAHGHCGRGSQ*SDG 561
L RSTPMARPA P*L* + +GPRP YFLPGAHGH G GSQ* G
Sbjct: 380 LSRSTPMARPAWP*L*FQLSCIGPRP*YFLPGAHGHSGFGSQ*LPG 243
Score = 70.3 bits (147), Expect(2) = 1e-060
Identities = 27/34 (79%), Positives = 28/34 (82%)
Frame = -2 / +1
Query: 263 YGVITNIINGGIECGHGTDPRVTDRIGFYKRYCD 162
YGVITNII GG ECG G +P V DRIGFYKRYCD
Sbjct: 538 YGVITNIIYGGRECGKGQNPDVVDRIGFYKRYCD 639
Score = 53.8 bits (111), Expect(2) = 1e-041
Identities = 22/34 (64%), Positives = 26/34 (76%)
Frame = +3 / -1
Query: 162 IAVALVEANPVGDPGVRPVPALDPTVDDVGDHAV 263
+ V+LVE NPV GV P+PAL PT+DDVGD AV
Sbjct: 639 VTVSLVEPNPVYHVGVLPLPALPPTIDDVGDDAV 538
>gb|AV935813.1|AV935813 AV935813 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal6i19 3', mRNA sequence
Length = 620
Score = 126 bits (269), Expect(2) = 2e-057
Identities = 45/59 (76%), Positives = 52/59 (88%)
Frame = -2 / -3
Query: 485 QISFNYNYGPAGRAIGVDLLNNPDLVATDPVISFKTALWFWMNARDNKPSCHAVITGQW 309
Q++ NYNYGPAGRAIGVDLLNNPDLVA+DP ++FKTA+WFWM + NKPSCH VITG W
Sbjct: 618 QLTHNYNYGPAGRAIGVDLLNNPDLVASDPTVAFKTAIWFWMTTQSNKPSCHDVITGLW 442
Score = 116 bits (248), Expect(2) = 2e-057
Identities = 44/60 (73%), Positives = 50/60 (83%)
Frame = -2 / -3
Query: 266 GYGVITNIINGGIECGHGTDPRVTDRIGFYKRYCDVFRIGYGSNLDCDGQRPFNSGLAVE 87
GYGVITN+INGGIECG G + +V DRIGFYKRYCD+F IGYG+NLDC Q FN GLAV+
Sbjct: 402 GYGVITNVINGGIECGKGQNDKVADRIGFYKRYCDIFGIGYGNNLDCYNQLSFNIGLAVQ 223
Score = 108 bits (231), Expect = 2e-023
Identities = 51/84 (60%), Positives = 57/84 (67%)
Frame = +1 / +2
Query: 235 PLMMLVITPYPGAPRPAALSAAVGVHCPVITAWHDGLLSRAFIQNHSAVLKDITGSVATR 414
P +M ++ RPAALS AVG+H PVIT+WHDGLL IQN AVL GS ATR
Sbjct: 368 PPLMTLVITPYPGTRPAALSLAVGLHNPVITSWHDGLLDCVVIQNQIAVLNATVGSDATR 547
Query: 415 SGLLRRSTPMARPAGP*L*LKEIW 486
SGL RSTP+ARPAGP*L*L W
Sbjct: 548 SGLFSRSTPIARPAGP*L*LWVSW 619
Score = 95.0 bits (201), Expect(2) = 1e-034
Identities = 43/60 (71%), Positives = 44/60 (73%)
Frame = +1 / +2
Query: 91 TASPLLKGLWPSQSRLLP*PMRKTSQ*RL*KPIRSVTRGSVPCPHSIPPLMMLVITPYPG 270
TASP+L W QSRL P*PM K SQ*RL* PIRS T P PHSIPPLM LVITPYPG
Sbjct: 227 TASPMLNDNWL*QSRLFP*PMPKMSQ*RL*NPIRSATLSFCPLPHSIPPLMTLVITPYPG 406
Score = 84.9 bits (179), Expect(2) = 3e-027
Identities = 35/59 (59%), Positives = 44/59 (74%)
Frame = +3 / +1
Query: 87 LNRQSAIEGPLAVAIEIAPVADAEDIAVALVEANPVGDPGVRPVPALDPTVDDVGDHAV 263
L+R+ +E L VA+E+ PVADAED+ VALVE +PVG V P+ A DP +DDVGDHAV
Sbjct: 223 LHREPDVERQLVVAVEVIPVADAEDVTVALVEPDPVGHLVVLPLAAFDPAIDDVGDHAV 399
Score = 71.2 bits (149), Expect(2) = 1e-034
Identities = 35/70 (50%), Positives = 39/70 (55%)
Frame = +3 / +1
Query: 276 PAGRPVRSRGRPLPRDHGVARRLVVPRVHPEPQRCLEGYHGXXXXXXXXXXXXHADGSPR 455
P+GR V R P PRDH VARRLV R HPEP R LE + H D PR
Sbjct: 409 PSGRAVPGRRPPQPRDHVVARRLVGLRRHPEPNRRLERHRRVRRHQVRVVQQVHPDRPPR 588
Query: 456 RAVVVVEGDL 485
R+VVVV G+L
Sbjct: 589 RSVVVVVGEL 618
Score = 56.1 bits (116), Expect(2) = 3e-027
Identities = 25/37 (67%), Positives = 26/37 (70%)
Frame = +2 / +3
Query: 260 RTLARPGRPPCPQPWASTAP*SRRGTTACCPARSSRT 370
R + P RP CP P AST P*SRRGTTAC A SSRT
Sbjct: 393 RRIRVPVRPRCPWPSASTTP*SRRGTTACWTASSSRT 503
>gb|BJ476805.1|BJ476805 BJ476805 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal37c14 3', mRNA sequence
Length = 589
Score = 126 bits (269), Expect(2) = 2e-057
Identities = 45/59 (76%), Positives = 52/59 (88%)
Frame = -2 / -3
Query: 485 QISFNYNYGPAGRAIGVDLLNNPDLVATDPVISFKTALWFWMNARDNKPSCHAVITGQW 309
Q++ NYNYGPAGRAIGVDLLNNPDLVA+DP ++FKTA+WFWM + NKPSCH VITG W
Sbjct: 587 QLTHNYNYGPAGRAIGVDLLNNPDLVASDPTVAFKTAIWFWMTTQSNKPSCHDVITGLW 411
Score = 116 bits (248), Expect(2) = 2e-057
Identities = 44/60 (73%), Positives = 50/60 (83%)
Frame = -2 / -3
Query: 266 GYGVITNIINGGIECGHGTDPRVTDRIGFYKRYCDVFRIGYGSNLDCDGQRPFNSGLAVE 87
GYGVITN+INGGIECG G + +V DRIGFYKRYCD+F IGYG+NLDC Q FN GLAV+
Sbjct: 371 GYGVITNVINGGIECGKGQNDKVADRIGFYKRYCDIFGIGYGNNLDCYNQLSFNIGLAVQ 192
Score = 108 bits (231), Expect = 2e-023
Identities = 51/84 (60%), Positives = 57/84 (67%)
Frame = +1 / +1
Query: 235 PLMMLVITPYPGAPRPAALSAAVGVHCPVITAWHDGLLSRAFIQNHSAVLKDITGSVATR 414
P +M ++ RPAALS AVG+H PVIT+WHDGLL IQN AVL GS ATR
Sbjct: 337 PPLMTLVITPYPGTRPAALSLAVGLHNPVITSWHDGLLDCVVIQNQIAVLNATVGSDATR 516
Query: 415 SGLLRRSTPMARPAGP*L*LKEIW 486
SGL RSTP+ARPAGP*L*L W
Sbjct: 517 SGLFSRSTPIARPAGP*L*LWVSW 588
Score = 95.0 bits (201), Expect(2) = 1e-034
Identities = 43/60 (71%), Positives = 44/60 (73%)
Frame = +1 / +1
Query: 91 TASPLLKGLWPSQSRLLP*PMRKTSQ*RL*KPIRSVTRGSVPCPHSIPPLMMLVITPYPG 270
TASP+L W QSRL P*PM K SQ*RL* PIRS T P PHSIPPLM LVITPYPG
Sbjct: 196 TASPMLNDNWL*QSRLFP*PMPKMSQ*RL*NPIRSATLSFCPLPHSIPPLMTLVITPYPG 375
Score = 84.9 bits (179), Expect(2) = 3e-027
Identities = 35/59 (59%), Positives = 44/59 (74%)
Frame = +3 / +3
Query: 87 LNRQSAIEGPLAVAIEIAPVADAEDIAVALVEANPVGDPGVRPVPALDPTVDDVGDHAV 263
L+R+ +E L VA+E+ PVADAED+ VALVE +PVG V P+ A DP +DDVGDHAV
Sbjct: 192 LHREPDVERQLVVAVEVIPVADAEDVTVALVEPDPVGHLVVLPLAAFDPAIDDVGDHAV 368
Score = 71.2 bits (149), Expect(2) = 1e-034
Identities = 35/70 (50%), Positives = 39/70 (55%)
Frame = +3 / +3
Query: 276 PAGRPVRSRGRPLPRDHGVARRLVVPRVHPEPQRCLEGYHGXXXXXXXXXXXXHADGSPR 455
P+GR V R P PRDH VARRLV R HPEP R LE + H D PR
Sbjct: 378 PSGRAVPGRRPPQPRDHVVARRLVGLRRHPEPNRRLERHRRVRRHQVRVVQQVHPDRPPR 557
Query: 456 RAVVVVEGDL 485
R+VVVV G+L
Sbjct: 558 RSVVVVVGEL 587
Score = 56.1 bits (116), Expect(2) = 3e-027
Identities = 25/37 (67%), Positives = 26/37 (70%)
Frame = +2 / +2
Query: 260 RTLARPGRPPCPQPWASTAP*SRRGTTACCPARSSRT 370
R + P RP CP P AST P*SRRGTTAC A SSRT
Sbjct: 362 RRIRVPVRPRCPWPSASTTP*SRRGTTACWTASSSRT 472
>gb|CA012210.1|CA012210 HT04M11r HT Hordeum vulgare subsp. vulgare cDNA clone HT04M11
5-PRIME, mRNA sequence
Length = 568
Score = 181 bits (390), Expect(2) = 3e-057
Identities = 67/87 (77%), Positives = 73/87 (83%)
Frame = -2 / +1
Query: 569 RNPPSDYCEPRPQWPCAPGKKYFGRGPIQISFNYNYGPAGRAIGVDLLNNPDLVATDPVI 390
R S+YC P QWPCAPGK Y+GRGPIQ+S NYNYGPAGRAIGVDLL NPDLVATDP +
Sbjct: 187 RGATSNYCTPSAQWPCAPGKSYYGRGPIQLSHNYNYGPAGRAIGVDLLRNPDLVATDPTV 366
Query: 389 SFKTALWFWMNARDNKPSCHAVITGQW 309
SFKTA+WFWM A+ KPS HAVITGQW
Sbjct: 367 SFKTAMWFWMTAQAPKPSSHAVITGQW 447
Score = 144 bits (310), Expect = 3e-034
Identities = 66/106 (62%), Positives = 73/106 (68%)
Frame = +1 / -3
Query: 235 PLMMLVITPYPGAPRPAALSAAVGVHCPVITAWHDGLLSRAFIQNHSAVLKDITGSVATR 414
P + +++ RPAA S G+H PVITAW DG + A IQNH AVL D GSVATR
Sbjct: 521 PPLTMLVITPNPGTRPAARSVPDGLHWPVITAWLDGFGAWAVIQNHIAVLNDTVGSVATR 342
Query: 415 SGLLRRSTPMARPAGP*L*LKEIWMGPRPKYFLPGAHGHCGRGSQ* 552
SGL RRSTPMARPAGP*L*L E W+GPRP PGAHGHC G Q*
Sbjct: 341 SGLRRRSTPMARPAGP*L*LWESWIGPRP**LFPGAHGHCALGVQ* 204
Score = 60.2 bits (125), Expect(2) = 3e-057
Identities = 22/27 (81%), Positives = 24/27 (88%)
Frame = -2 / +1
Query: 266 GYGVITNIINGGIECGHGTDPRVTDRI 186
G+GVITNI+NGGIECGHG D RV DRI
Sbjct: 487 GFGVITNIVNGGIECGHGQDSRVADRI 567
>gb|AV935770.1|AV935770 AV935770 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal6f19 3', mRNA sequence
Length = 615
Score = 122 bits (262), Expect(2) = 1e-056
Identities = 44/55 (80%), Positives = 49/55 (89%)
Frame = -2 / -2
Query: 473 NYNYGPAGRAIGVDLLNNPDLVATDPVISFKTALWFWMNARDNKPSCHAVITGQW 309
NYNYGPAGRAIGVDLLNNPDLVA+DP ++FKTA+WFWM + NKPSCH VITG W
Sbjct: 611 NYNYGPAGRAIGVDLLNNPDLVASDPTVAFKTAIWFWMTTQSNKPSCHDVITGLW 447
Score = 116 bits (248), Expect(2) = 1e-056
Identities = 44/60 (73%), Positives = 50/60 (83%)
Frame = -2 / -2
Query: 266 GYGVITNIINGGIECGHGTDPRVTDRIGFYKRYCDVFRIGYGSNLDCDGQRPFNSGLAVE 87
GYGVITN+INGGIECG G + +V DRIGFYKRYCD+F IGYG+NLDC Q FN GLAV+
Sbjct: 407 GYGVITNVINGGIECGKGQNDKVADRIGFYKRYCDIFGIGYGNNLDCYNQLSFNIGLAVQ 228
Score = 106 bits (227), Expect = 8e-023
Identities = 50/80 (62%), Positives = 56/80 (70%)
Frame = +1 / +1
Query: 235 PLMMLVITPYPGAPRPAALSAAVGVHCPVITAWHDGLLSRAFIQNHSAVLKDITGSVATR 414
P +M ++ RPAALS AVG+H PVIT+WHDGLL IQN AVL GS ATR
Sbjct: 373 PPLMTLVITPYPGTRPAALSLAVGLHNPVITSWHDGLLDCVVIQNQIAVLNATVGSDATR 552
Query: 415 SGLLRRSTPMARPAGP*L*L 474
SGL RSTP+ARPAGP*L*L
Sbjct: 553 SGLFSRSTPIARPAGP*L*L 612
Score = 95.0 bits (201), Expect(2) = 2e-033
Identities = 43/60 (71%), Positives = 44/60 (73%)
Frame = +1 / +1
Query: 91 TASPLLKGLWPSQSRLLP*PMRKTSQ*RL*KPIRSVTRGSVPCPHSIPPLMMLVITPYPG 270
TASP+L W QSRL P*PM K SQ*RL* PIRS T P PHSIPPLM LVITPYPG
Sbjct: 232 TASPMLNDNWL*QSRLFP*PMPKMSQ*RL*NPIRSATLSFCPLPHSIPPLMTLVITPYPG 411
Score = 84.9 bits (179), Expect(2) = 3e-027
Identities = 35/59 (59%), Positives = 44/59 (74%)
Frame = +3 / +3
Query: 87 LNRQSAIEGPLAVAIEIAPVADAEDIAVALVEANPVGDPGVRPVPALDPTVDDVGDHAV 263
L+R+ +E L VA+E+ PVADAED+ VALVE +PVG V P+ A DP +DDVGDHAV
Sbjct: 228 LHREPDVERQLVVAVEVIPVADAEDVTVALVEPDPVGHLVVLPLAAFDPAIDDVGDHAV 404
Score = 66.6 bits (139), Expect(2) = 2e-033
Identities = 33/66 (50%), Positives = 36/66 (54%)
Frame = +3 / +3
Query: 276 PAGRPVRSRGRPLPRDHGVARRLVVPRVHPEPQRCLEGYHGXXXXXXXXXXXXHADGSPR 455
P+GR V R P PRDH VARRLV R HPEP R LE + H D PR
Sbjct: 414 PSGRAVPGRRPPQPRDHVVARRLVGLRRHPEPNRRLERHRRVRRHQVRVVQQVHPDRPPR 593
Query: 456 RAVVVV 473
R+VVVV
Sbjct: 594 RSVVVV 611
Score = 56.1 bits (116), Expect(2) = 3e-027
Identities = 25/37 (67%), Positives = 26/37 (70%)
Frame = +2 / +2
Query: 260 RTLARPGRPPCPQPWASTAP*SRRGTTACCPARSSRT 370
R + P RP CP P AST P*SRRGTTAC A SSRT
Sbjct: 398 RRIRVPVRPRCPWPSASTTP*SRRGTTACWTASSSRT 508
>gb|AV933371.1|AV933371 AV933371 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal6i19 5', mRNA sequence
Length = 583
Score = 122 bits (262), Expect(2) = 1e-056
Identities = 44/55 (80%), Positives = 49/55 (89%)
Frame = -2 / +3
Query: 473 NYNYGPAGRAIGVDLLNNPDLVATDPVISFKTALWFWMNARDNKPSCHAVITGQW 309
NYNYGPAGRAIGVDLLNNPDLVA+DP ++FKTA+WFWM + NKPSCH VITG W
Sbjct: 6 NYNYGPAGRAIGVDLLNNPDLVASDPTVAFKTAIWFWMTTQSNKPSCHDVITGLW 170
Score = 116 bits (248), Expect(2) = 1e-056
Identities = 44/60 (73%), Positives = 50/60 (83%)
Frame = -2 / +3
Query: 266 GYGVITNIINGGIECGHGTDPRVTDRIGFYKRYCDVFRIGYGSNLDCDGQRPFNSGLAVE 87
GYGVITN+INGGIECG G + +V DRIGFYKRYCD+F IGYG+NLDC Q FN GLAV+
Sbjct: 210 GYGVITNVINGGIECGKGQNDKVADRIGFYKRYCDIFGIGYGNNLDCYNQLSFNIGLAVQ 389
Score = 106 bits (227), Expect = 8e-023
Identities = 50/80 (62%), Positives = 56/80 (70%)
Frame = +1 / -1
Query: 235 PLMMLVITPYPGAPRPAALSAAVGVHCPVITAWHDGLLSRAFIQNHSAVLKDITGSVATR 414
P +M ++ RPAALS AVG+H PVIT+WHDGLL IQN AVL GS ATR
Sbjct: 244 PPLMTLVITPYPGTRPAALSLAVGLHNPVITSWHDGLLDCVVIQNQIAVLNATVGSDATR 65
Query: 415 SGLLRRSTPMARPAGP*L*L 474
SGL RSTP+ARPAGP*L*L
Sbjct: 64 SGLFSRSTPIARPAGP*L*L 5
Score = 95.0 bits (201), Expect(2) = 2e-033
Identities = 43/60 (71%), Positives = 44/60 (73%)
Frame = +1 / -1
Query: 91 TASPLLKGLWPSQSRLLP*PMRKTSQ*RL*KPIRSVTRGSVPCPHSIPPLMMLVITPYPG 270
TASP+L W QSRL P*PM K SQ*RL* PIRS T P PHSIPPLM LVITPYPG
Sbjct: 385 TASPMLNDNWL*QSRLFP*PMPKMSQ*RL*NPIRSATLSFCPLPHSIPPLMTLVITPYPG 206
Score = 84.9 bits (179), Expect(2) = 3e-027
Identities = 35/59 (59%), Positives = 44/59 (74%)
Frame = +3 / -3
Query: 87 LNRQSAIEGPLAVAIEIAPVADAEDIAVALVEANPVGDPGVRPVPALDPTVDDVGDHAV 263
L+R+ +E L VA+E+ PVADAED+ VALVE +PVG V P+ A DP +DDVGDHAV
Sbjct: 389 LHREPDVERQLVVAVEVIPVADAEDVTVALVEPDPVGHLVVLPLAAFDPAIDDVGDHAV 213
Score = 66.6 bits (139), Expect(2) = 2e-033
Identities = 33/66 (50%), Positives = 36/66 (54%)
Frame = +3 / -3
Query: 276 PAGRPVRSRGRPLPRDHGVARRLVVPRVHPEPQRCLEGYHGXXXXXXXXXXXXHADGSPR 455
P+GR V R P PRDH VARRLV R HPEP R LE + H D PR
Sbjct: 203 PSGRAVPGRRPPQPRDHVVARRLVGLRRHPEPNRRLERHRRVRRHQVRVVQQVHPDRPPR 24
Query: 456 RAVVVV 473
R+VVVV
Sbjct: 23 RSVVVV 6
Score = 56.1 bits (116), Expect(2) = 3e-027
Identities = 25/37 (67%), Positives = 26/37 (70%)
Frame = +2 / -2
Query: 260 RTLARPGRPPCPQPWASTAP*SRRGTTACCPARSSRT 370
R + P RP CP P AST P*SRRGTTAC A SSRT
Sbjct: 219 RRIRVPVRPRCPWPSASTTP*SRRGTTACWTASSSRT 109
>gb|CD663592.1|CD663592 UCRHV18_06aa04_b1 Drought-stressed Dicktoo barley epidermis cDNA
library Hordeum vulgare subsp. vulgare cDNA clone
UCRHV18_06aa04, mRNA sequence
Length = 572
Score = 122 bits (262), Expect(2) = 1e-056
Identities = 44/55 (80%), Positives = 49/55 (89%)
Frame = -2 / -2
Query: 473 NYNYGPAGRAIGVDLLNNPDLVATDPVISFKTALWFWMNARDNKPSCHAVITGQW 309
NYNYGPAGRAIGVDLLNNPDLVA+DP ++FKTA+WFWM + NKPSCH VITG W
Sbjct: 568 NYNYGPAGRAIGVDLLNNPDLVASDPTVAFKTAIWFWMTTQSNKPSCHDVITGLW 404
Score = 116 bits (248), Expect(2) = 1e-056
Identities = 44/60 (73%), Positives = 50/60 (83%)
Frame = -2 / -2
Query: 266 GYGVITNIINGGIECGHGTDPRVTDRIGFYKRYCDVFRIGYGSNLDCDGQRPFNSGLAVE 87
GYGVITN+INGGIECG G + +V DRIGFYKRYCD+F IGYG+NLDC Q FN GLAV+
Sbjct: 364 GYGVITNVINGGIECGKGQNDKVADRIGFYKRYCDIFGIGYGNNLDCYNQLSFNIGLAVQ 185
Score = 106 bits (227), Expect = 8e-023
Identities = 50/80 (62%), Positives = 56/80 (70%)
Frame = +1 / +3
Query: 235 PLMMLVITPYPGAPRPAALSAAVGVHCPVITAWHDGLLSRAFIQNHSAVLKDITGSVATR 414
P +M ++ RPAALS AVG+H PVIT+WHDGLL IQN AVL GS ATR
Sbjct: 330 PPLMTLVITPYPGTRPAALSLAVGLHNPVITSWHDGLLDCVVIQNQIAVLNATVGSDATR 509
Query: 415 SGLLRRSTPMARPAGP*L*L 474
SGL RSTP+ARPAGP*L*L
Sbjct: 510 SGLFSRSTPIARPAGP*L*L 569
Score = 95.0 bits (201), Expect(2) = 2e-033
Identities = 43/60 (71%), Positives = 44/60 (73%)
Frame = +1 / +3
Query: 91 TASPLLKGLWPSQSRLLP*PMRKTSQ*RL*KPIRSVTRGSVPCPHSIPPLMMLVITPYPG 270
TASP+L W QSRL P*PM K SQ*RL* PIRS T P PHSIPPLM LVITPYPG
Sbjct: 189 TASPMLNDNWL*QSRLFP*PMPKMSQ*RL*NPIRSATLSFCPLPHSIPPLMTLVITPYPG 368
Score = 83.1 bits (175), Expect(2) = 1e-026
Identities = 34/59 (57%), Positives = 44/59 (74%)
Frame = +3 / +2
Query: 87 LNRQSAIEGPLAVAIEIAPVADAEDIAVALVEANPVGDPGVRPVPALDPTVDDVGDHAV 263
L+R+ +E L VA+E+ PVADAED+ VALV+ +PVG V P+ A DP +DDVGDHAV
Sbjct: 185 LHREPDVERQLVVAVEVIPVADAEDVTVALVKPDPVGHLVVLPLAAFDPAIDDVGDHAV 361
Score = 66.6 bits (139), Expect(2) = 2e-033
Identities = 33/66 (50%), Positives = 36/66 (54%)
Frame = +3 / +2
Query: 276 PAGRPVRSRGRPLPRDHGVARRLVVPRVHPEPQRCLEGYHGXXXXXXXXXXXXHADGSPR 455
P+GR V R P PRDH VARRLV R HPEP R LE + H D PR
Sbjct: 371 PSGRAVPGRRPPQPRDHVVARRLVGLRRHPEPNRRLERHRRVRRHQVRVVQQVHPDRPPR 550
Query: 456 RAVVVV 473
R+VVVV
Sbjct: 551 RSVVVV 568
Score = 56.1 bits (116), Expect(2) = 1e-026
Identities = 25/37 (67%), Positives = 26/37 (70%)
Frame = +2 / +1
Query: 260 RTLARPGRPPCPQPWASTAP*SRRGTTACCPARSSRT 370
R + P RP CP P AST P*SRRGTTAC A SSRT
Sbjct: 355 RRIRVPVRPRCPWPSASTTP*SRRGTTACWTASSSRT 465
>gb|BJ469713.1|BJ469713 BJ469713 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal37c14 5', mRNA sequence
Length = 523
Score = 122 bits (262), Expect(2) = 1e-056
Identities = 44/55 (80%), Positives = 49/55 (89%)
Frame = -2 / +3
Query: 473 NYNYGPAGRAIGVDLLNNPDLVATDPVISFKTALWFWMNARDNKPSCHAVITGQW 309
NYNYGPAGRAIGVDLLNNPDLVA+DP ++FKTA+WFWM + NKPSCH VITG W
Sbjct: 6 NYNYGPAGRAIGVDLLNNPDLVASDPTVAFKTAIWFWMTTQSNKPSCHDVITGLW 170
Score = 116 bits (248), Expect(2) = 1e-056
Identities = 44/60 (73%), Positives = 50/60 (83%)
Frame = -2 / +3
Query: 266 GYGVITNIINGGIECGHGTDPRVTDRIGFYKRYCDVFRIGYGSNLDCDGQRPFNSGLAVE 87
GYGVITN+INGGIECG G + +V DRIGFYKRYCD+F IGYG+NLDC Q FN GLAV+
Sbjct: 210 GYGVITNVINGGIECGKGQNDKVADRIGFYKRYCDIFGIGYGNNLDCYNQLSFNIGLAVQ 389
Score = 106 bits (227), Expect = 8e-023
Identities = 50/80 (62%), Positives = 56/80 (70%)
Frame = +1 / -1
Query: 235 PLMMLVITPYPGAPRPAALSAAVGVHCPVITAWHDGLLSRAFIQNHSAVLKDITGSVATR 414
P +M ++ RPAALS AVG+H PVIT+WHDGLL IQN AVL GS ATR
Sbjct: 244 PPLMTLVITPYPGTRPAALSLAVGLHNPVITSWHDGLLDCVVIQNQIAVLNATVGSDATR 65
Query: 415 SGLLRRSTPMARPAGP*L*L 474
SGL RSTP+ARPAGP*L*L
Sbjct: 64 SGLFSRSTPIARPAGP*L*L 5
Score = 95.0 bits (201), Expect(2) = 2e-033
Identities = 43/60 (71%), Positives = 44/60 (73%)
Frame = +1 / -1
Query: 91 TASPLLKGLWPSQSRLLP*PMRKTSQ*RL*KPIRSVTRGSVPCPHSIPPLMMLVITPYPG 270
TASP+L W QSRL P*PM K SQ*RL* PIRS T P PHSIPPLM LVITPYPG
Sbjct: 385 TASPMLNDNWL*QSRLFP*PMPKMSQ*RL*NPIRSATLSFCPLPHSIPPLMTLVITPYPG 206
Score = 84.9 bits (179), Expect(2) = 3e-027
Identities = 35/59 (59%), Positives = 44/59 (74%)
Frame = +3 / -3
Query: 87 LNRQSAIEGPLAVAIEIAPVADAEDIAVALVEANPVGDPGVRPVPALDPTVDDVGDHAV 263
L+R+ +E L VA+E+ PVADAED+ VALVE +PVG V P+ A DP +DDVGDHAV
Sbjct: 389 LHREPDVERQLVVAVEVIPVADAEDVTVALVEPDPVGHLVVLPLAAFDPAIDDVGDHAV 213
Score = 66.6 bits (139), Expect(2) = 2e-033
Identities = 33/66 (50%), Positives = 36/66 (54%)
Frame = +3 / -3
Query: 276 PAGRPVRSRGRPLPRDHGVARRLVVPRVHPEPQRCLEGYHGXXXXXXXXXXXXHADGSPR 455
P+GR V R P PRDH VARRLV R HPEP R LE + H D PR
Sbjct: 203 PSGRAVPGRRPPQPRDHVVARRLVGLRRHPEPNRRLERHRRVRRHQVRVVQQVHPDRPPR 24
Query: 456 RAVVVV 473
R+VVVV
Sbjct: 23 RSVVVV 6
Score = 56.1 bits (116), Expect(2) = 3e-027
Identities = 25/37 (67%), Positives = 26/37 (70%)
Frame = +2 / -2
Query: 260 RTLARPGRPPCPQPWASTAP*SRRGTTACCPARSSRT 370
R + P RP CP P AST P*SRRGTTAC A SSRT
Sbjct: 219 RRIRVPVRPRCPWPSASTTP*SRRGTTACWTASSSRT 109
>gb|CB879385.1|CB879385 HP02A05w HP Hordeum vulgare subsp. vulgare cDNA clone HP02A05
3-PRIME, mRNA sequence
Length = 522
Score = 122 bits (261), Expect(2) = 2e-056
Identities = 47/61 (77%), Positives = 54/61 (88%)
Frame = -2 / -3
Query: 494 GPIQISFNYNYGPAGRAIGVDLLNNPDLVATDPVISFKTALWFWMNARDNKPSCHAVITG 315
GP+Q+S+NYNYG AGRAIGVDLLNNPDLVATD +SFK ALWFW+ A+ NKP+ HAVITG
Sbjct: 520 GPMQLSWNYNYGQAGRAIGVDLLNNPDLVATDASVSFKAALWFWVTAQANKPASHAVITG 341
Query: 314 Q 312
Q
Sbjct: 340 Q 338
Score = 116 bits (248), Expect(2) = 2e-056
Identities = 45/67 (67%), Positives = 53/67 (79%)
Frame = -2 / -3
Query: 266 GYGVITNIINGGIECGHGTDPRVTDRIGFYKRYCDVFRIGYGSNLDCDGQRPFNSGLAVE 87
G+GVI+NIINGG ECG G +P V DRIGFYKRYCDV +GYG+NLDC QR F GL+
Sbjct: 295 GFGVISNIINGGRECGKGQNPEVVDRIGFYKRYCDVLGVGYGNNLDCYNQRSFEDGLSAG 116
Query: 86 VAAQ*KR 66
+A+Q*KR
Sbjct: 115 LASQ*KR 95
Score = 99.1 bits (210), Expect(3) = 9e-031
Identities = 43/68 (63%), Positives = 48/68 (70%)
Frame = +1 / +3
Query: 67 RFHCAATSTASPLLKGLWPSQSRLLP*PMRKTSQ*RL*KPIRSVTRGSVPCPHSIPPLMM 246
RFHC A+ SP K LW QSRL P*P +TSQ RL* PIRS T G P PHS+PPLMM
Sbjct: 96 RFHCDASPAESPSSKDLWL*QSRLFP*PTPRTSQYRL*NPIRSTTSGFCPFPHSLPPLMM 275
Query: 247 LVITPYPG 270
L++TP PG
Sbjct: 276 LLMTPNPG 299
Score = 46.9 bits (96), Expect(3) = 9e-031
Identities = 23/39 (58%), Positives = 26/39 (66%)
Frame = +3 / +2
Query: 270 RAPAGRPVRSRGRPLPRDHGVARRLVVPRVHPEPQRCLE 386
R PAG V +R R L RDHGV RRLV +P+PQR LE
Sbjct: 296 RHPAGGIVGARRRSLTRDHGVRRRLVRLSRNPKPQRRLE 412
Score = 24.9 bits (48), Expect(3) = 9e-031
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +3 / +2
Query: 435 HADGSPRRAVVVVEGDLDGA 494
H DG+P AVVVV +L A
Sbjct: 461 HPDGAPCLAVVVVPAELHRA 520
>gb|BI948372.1|BI948372 HVSMEl0009E13f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0009E13f, mRNA sequence
Length = 617
Score = 128 bits (274), Expect(2) = 7e-056
Identities = 50/64 (78%), Positives = 53/64 (82%)
Frame = -2 / +1
Query: 500 GRGPIQISFNYNYGPAGRAIGVDLLNNPDLVATDPVISFKTALWFWMNARDNKPSCHAVI 321
GRGPIQIS NYNYGPAGRAI DLLNNPDLVATD +SFKTALWFWM + KPS H VI
Sbjct: 1 GRGPIQISHNYNYGPAGRAICADLLNNPDLVATDATVSFKTALWFWMTPQSPKPSSHDVI 180
Query: 320 TGQW 309
TG+W
Sbjct: 181 TGRW 192
Score = 114 bits (244), Expect = 3e-025
Identities = 53/88 (60%), Positives = 61/88 (69%)
Frame = +1 / -1
Query: 235 PLMMLVITPYPGAPRPAALSAAVGVHCPVITAWHDGLLSRAFIQNHSAVLKDITGSVATR 414
P +M+++ PAA S G+H PVIT+W +GL IQNH+AVLKD SVATR
Sbjct: 266 PPLMMLVITPYPGTLPAAWSVPEGLHRPVITSWLEGLGDCGVIQNHNAVLKDTVASVATR 87
Query: 415 SGLLRRSTPMARPAGP*L*LKEIWMGPR 498
SGLL RS MARPAGP*L*L EIWMGPR
Sbjct: 86 SGLLSRSAQMARPAGP*L*LWEIWMGPR 3
Score = 108 bits (231), Expect(2) = 7e-056
Identities = 40/53 (75%), Positives = 43/53 (81%)
Frame = -2 / +1
Query: 266 GYGVITNIINGGIECGHGTDPRVTDRIGFYKRYCDVFRIGYGSNLDCDGQRPF 108
GYGVITNIINGG+ECG G D RV DRIGFYKRYCD+ + YG NLDC QRPF
Sbjct: 232 GYGVITNIINGGLECGRGQDARVADRIGFYKRYCDLLGVSYGDNLDCYNQRPF 390
Score = 93.6 bits (198), Expect(3) = 1e-031
Identities = 39/57 (68%), Positives = 45/57 (78%)
Frame = +3 / -3
Query: 108 EGPLAVAIEIAPVADAEDIAVALVEANPVGDPGVRPVPALDPTVDDVGDHAVPWRAP 278
E PL VA+++ VADAE+IAVALVE +PVG GV P PAL+PTVDDVGDHAVP P
Sbjct: 390 ERPLVVAVQVVSVADAEEIAVALVEPDPVGYAGVLPAPALEPTVDDVGDHAVPRNPP 220
Score = 46.0 bits (94), Expect(3) = 1e-031
Identities = 23/41 (56%), Positives = 25/41 (60%)
Frame = +3 / -3
Query: 270 RAPAGRPVRSRGRPLPRDHGVARRLVVPRVHPEPQRCLEGY 392
R P R V +RG P DH VARR R HPEPQR LEG+
Sbjct: 231 RNPPCRLVGARGAPPAGDHVVARRFG*LRRHPEPQRRLEGH 109
Score = 34.1 bits (68), Expect(3) = 1e-031
Identities = 15/20 (75%), Positives = 15/20 (75%)
Frame = +3 / -3
Query: 438 ADGSPRRAVVVVEGDLDGAA 497
ADG P R VVVV GDLDG A
Sbjct: 63 ADGPPCRPVVVVVGDLDGPA 4
>gb|CA010697.1|CA010697 HT08P16u HT Hordeum vulgare subsp. vulgare cDNA clone HT08P16
3-PRIME, mRNA sequence
Length = 544
Score = 116 bits (247), Expect(2) = 4e-054
Identities = 44/53 (83%), Positives = 47/53 (88%)
Frame = -2 / -3
Query: 467 NYGPAGRAIGVDLLNNPDLVATDPVISFKTALWFWMNARDNKPSCHAVITGQW 309
NYGPAGRAIGVDLL NPDLVATDP +SFKTA+WFWM A+ KPS HAVITGQW
Sbjct: 542 NYGPAGRAIGVDLLRNPDLVATDPTVSFKTAMWFWMTAQAPKPSSHAVITGQW 384
Score = 115 bits (245), Expect(2) = 4e-054
Identities = 41/53 (77%), Positives = 46/53 (86%)
Frame = -2 / -3
Query: 266 GYGVITNIINGGIECGHGTDPRVTDRIGFYKRYCDVFRIGYGSNLDCDGQRPF 108
G+GVITNI+NGGIECGHG D RV DRIGFYKRYCD+ +GYG+NLDC QRPF
Sbjct: 344 GFGVITNIVNGGIECGHGQDSRVADRIGFYKRYCDILGVGYGNNLDCYNQRPF 186
Score = 103 bits (220), Expect = 7e-022
Identities = 48/78 (61%), Positives = 54/78 (69%)
Frame = +1 / +1
Query: 235 PLMMLVITPYPGAPRPAALSAAVGVHCPVITAWHDGLLSRAFIQNHSAVLKDITGSVATR 414
P + +++ RPAA S G+H PVITAW DG + A IQNH AVL D GSVATR
Sbjct: 310 PPLTMLVITPNPGTRPAARSVPDGLHWPVITAWLDGFGAWAVIQNHIAVLNDTVGSVATR 489
Query: 415 SGLLRRSTPMARPAGP*L 468
SGL RRSTPMARPAGP*L
Sbjct: 490 SGLRRRSTPMARPAGP*L 543
Score = 94.1 bits (199), Expect(2) = 5e-025
Identities = 42/54 (77%), Positives = 43/54 (79%)
Frame = +1 / +1
Query: 109 KGLWPSQSRLLP*PMRKTSQ*RL*KPIRSVTRGSVPCPHSIPPLMMLVITPYPG 270
KGLW QSRLLP*P + SQ*RL* PIRS TR S PCPHSIPPL MLVITP PG
Sbjct: 187 KGLWL*QSRLLP*PTPRMSQ*RL*NPIRSATRLSCPCPHSIPPLTMLVITPNPG 348
Score = 39.6 bits (80), Expect(2) = 5e-025
Identities = 19/37 (51%), Positives = 22/37 (59%)
Frame = +3 / +3
Query: 276 PAGRPVRSRGRPLPRDHGVARRLVVPRVHPEPQRCLE 386
PA PVR PL RDH +ARRL HP+P R L+
Sbjct: 351 PARCPVRP*WAPLARDHSMARRLWRLGRHPKPHRSLK 461
>gb|BG368852.1|BG368852 HVSMEi0020P03f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0020P03f, mRNA sequence
Length = 623
Score = 180 bits (387), Expect(2) = 5e-053
Identities = 67/87 (77%), Positives = 72/87 (82%)
Frame = -2 / +2
Query: 569 RNPPSDYCEPRPQWPCAPGKKYFGRGPIQISFNYNYGPAGRAIGVDLLNNPDLVATDPVI 390
R S+YC P QWPCAPGK Y+GRGPIQ+S NYNYGPAGRAIGVDLL NPDLVATDP +
Sbjct: 263 RGATSNYCTPSAQWPCAPGKSYYGRGPIQLSHNYNYGPAGRAIGVDLLRNPDLVATDPTV 442
Query: 389 SFKTALWFWMNARDNKPSCHAVITGQW 309
SFKTA+WFWM A KPS HAVITGQW
Sbjct: 443 SFKTAMWFWMTAHAPKPSNHAVITGQW 523
Score = 145 bits (312), Expect = 1e-034
Identities = 66/106 (62%), Positives = 73/106 (68%)
Frame = +1 / -3
Query: 235 PLMMLVITPYPGAPRPAALSAAVGVHCPVITAWHDGLLSRAFIQNHSAVLKDITGSVATR 414
P + +++ RPAA S G+H PVITAW DG + A IQNH AVL D GSVATR
Sbjct: 597 PPLTMLVITPNPGTRPAARSVLDGLHWPVITAWFDGFGAWAVIQNHIAVLNDTVGSVATR 418
Query: 415 SGLLRRSTPMARPAGP*L*LKEIWMGPRPKYFLPGAHGHCGRGSQ* 552
SGL RRSTPMARPAGP*L*L E W+GPRP PGAHGHC G Q*
Sbjct: 417 SGLRRRSTPMARPAGP*L*LWESWIGPRP**LFPGAHGHCALGVQ* 280
Score = 47.3 bits (97), Expect(2) = 5e-053
Identities = 16/18 (88%), Positives = 18/18 (100%)
Frame = -2 / +2
Query: 266 GYGVITNIINGGIECGHG 213
G+GVITNI+NGGIECGHG
Sbjct: 563 GFGVITNIVNGGIECGHG 616
>gb|CB879697.1|CB879697 HP03F07w HP Hordeum vulgare subsp. vulgare cDNA clone HP03F07
3-PRIME, mRNA sequence
Length = 594
Score = 116 bits (248), Expect(2) = 5e-053
Identities = 44/60 (73%), Positives = 50/60 (83%)
Frame = -2 / -3
Query: 266 GYGVITNIINGGIECGHGTDPRVTDRIGFYKRYCDVFRIGYGSNLDCDGQRPFNSGLAVE 87
GYGVITN+INGGIECG G + +V DRIGFYKRYCD+F IGYG+NLDC Q FN GLAV+
Sbjct: 400 GYGVITNVINGGIECGKGQNDKVADRIGFYKRYCDIFGIGYGNNLDCYNQLSFNIGLAVQ 221
Score = 111 bits (236), Expect(2) = 5e-053
Identities = 40/51 (78%), Positives = 45/51 (88%)
Frame = -2 / -3
Query: 461 GPAGRAIGVDLLNNPDLVATDPVISFKTALWFWMNARDNKPSCHAVITGQW 309
GPAGRAIGVDLLNNPDLVA+DP ++FKTA+WFWM + NKPSCH VITG W
Sbjct: 592 GPAGRAIGVDLLNNPDLVASDPTVAFKTAIWFWMTTQSNKPSCHDVITGLW 440
Score = 102 bits (217), Expect = 2e-021
Identities = 46/76 (60%), Positives = 52/76 (68%)
Frame = +1 / +3
Query: 235 PLMMLVITPYPGAPRPAALSAAVGVHCPVITAWHDGLLSRAFIQNHSAVLKDITGSVATR 414
P +M ++ RPAALS AVG+H PVIT+WHDGLL IQN AVL GS ATR
Sbjct: 366 PPLMTLVITPYPGTRPAALSLAVGLHNPVITSWHDGLLDCVVIQNQIAVLNATVGSDATR 545
Query: 415 SGLLRRSTPMARPAGP 462
SGL RSTP+ARPAGP
Sbjct: 546 SGLFSRSTPIARPAGP 593
Score = 95.0 bits (201), Expect(2) = 4e-031
Identities = 43/60 (71%), Positives = 44/60 (73%)
Frame = +1 / +3
Query: 91 TASPLLKGLWPSQSRLLP*PMRKTSQ*RL*KPIRSVTRGSVPCPHSIPPLMMLVITPYPG 270
TASP+L W QSRL P*PM K SQ*RL* PIRS T P PHSIPPLM LVITPYPG
Sbjct: 225 TASPMLNDNWL*QSRLFP*PMPKMSQ*RL*NPIRSATLSFCPLPHSIPPLMTLVITPYPG 404
Score = 84.9 bits (179), Expect(2) = 3e-027
Identities = 35/59 (59%), Positives = 44/59 (74%)
Frame = +3 / +2
Query: 87 LNRQSAIEGPLAVAIEIAPVADAEDIAVALVEANPVGDPGVRPVPALDPTVDDVGDHAV 263
L+R+ +E L VA+E+ PVADAED+ VALVE +PVG V P+ A DP +DDVGDHAV
Sbjct: 221 LHREPDVERQLVVAVEVIPVADAEDVTVALVEPDPVGHLVVLPLAAFDPAIDDVGDHAV 397
Score = 59.3 bits (123), Expect(2) = 4e-031
Identities = 29/62 (46%), Positives = 32/62 (51%)
Frame = +3 / +2
Query: 276 PAGRPVRSRGRPLPRDHGVARRLVVPRVHPEPQRCLEGYHGXXXXXXXXXXXXHADGSPR 455
P+GR V R P PRDH VARRLV R HPEP R LE + H D PR
Sbjct: 407 PSGRAVPGRRPPQPRDHVVARRLVGLRRHPEPNRRLERHRRVRRHQVRVVQQVHPDRPPR 586
Query: 456 RA 461
R+
Sbjct: 587 RS 592
Score = 56.1 bits (116), Expect(2) = 3e-027
Identities = 25/37 (67%), Positives = 26/37 (70%)
Frame = +2 / +1
Query: 260 RTLARPGRPPCPQPWASTAP*SRRGTTACCPARSSRT 370
R + P RP CP P AST P*SRRGTTAC A SSRT
Sbjct: 391 RRIRVPVRPRCPWPSASTTP*SRRGTTACWTASSSRT 501
>gb|BG368854.1|BG368854 HVSMEi0020P07f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0020P07f, mRNA sequence
Length = 625
Score = 178 bits (383), Expect(2) = 1e-052
Identities = 66/87 (75%), Positives = 72/87 (82%)
Frame = -2 / +2
Query: 569 RNPPSDYCEPRPQWPCAPGKKYFGRGPIQISFNYNYGPAGRAIGVDLLNNPDLVATDPVI 390
R S+YC P QWPCAPGK Y+GRGPIQ+S NYNYGPAGRAIGVDLL NPDLVATDP +
Sbjct: 263 RGATSNYCTPSAQWPCAPGKSYYGRGPIQLSHNYNYGPAGRAIGVDLLRNPDLVATDPTV 442
Query: 389 SFKTALWFWMNARDNKPSCHAVITGQW 309
S KTA+WFWM A+ KPS HAVITGQW
Sbjct: 443 SXKTAMWFWMTAQAPKPSSHAVITGQW 523
Score = 144 bits (308), Expect(2) = 4e-043
Identities = 65/92 (70%), Positives = 68/92 (73%)
Frame = +1 / -2
Query: 277 RPAALSAAVGVHCPVITAWHDGLLSRAFIQNHSAVLKDITGSVATRSGLLRRSTPMARPA 456
RPAA S G+H PVITAW DG + A IQNH AVL D GSVATRSGL RRSTPMARPA
Sbjct: 555 RPAARSVPDGLHWPVITAWLDGFGAWAVIQNHIAVLXDTVGSVATRSGLRRRSTPMARPA 376
Query: 457 GP*L*LKEIWMGPRPKYFLPGAHGHCGRGSQ* 552
GP*L*L E W+GPRP PGAHGHC G Q*
Sbjct: 375 GP*L*LWESWIGPRP**LFPGAHGHCALGVQ* 280
Score = 50.6 bits (104), Expect(2) = 4e-043
Identities = 19/23 (82%), Positives = 19/23 (82%)
Frame = +1 / -1
Query: 208 SVPCPHSIPPLMMLVITPYPGAP 276
S PCPHSIPPL MLVITP PG P
Sbjct: 622 SCPCPHSIPPLTMLVITPKPGHP 554
Score = 47.8 bits (98), Expect(2) = 1e-052
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = -2 / +3
Query: 266 GYGVITNIINGGIECGHGTD 207
G GVITNI+NGGIECGHG D
Sbjct: 564 GLGVITNIVNGGIECGHGQD 623
>gb|BI946904.1|BI946904 HVSMEl0002L21f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0002L21f, mRNA sequence
Length = 839
Score = 179 bits (386), Expect(3) = 2e-052
Identities = 68/87 (78%), Positives = 70/87 (80%)
Frame = -2 / +3
Query: 569 RNPPSDYCEPRPQWPCAPGKKYFGRGPIQISFNYNYGPAGRAIGVDLLNNPDLVATDPVI 390
R SDYC P QWPCAPGKKYFGRGPIQIS NYNYGPAGRAIG DLLNNPDLVATD +
Sbjct: 348 RGATSDYCTPSSQWPCAPGKKYFGRGPIQISHNYNYGPAGRAIGADLLNNPDLVATDATV 527
Query: 389 SFKTALWFWMNARDNKPSCHAVITGQW 309
SFKTALWFWM + KPS H VITG W
Sbjct: 528 SFKTALWFWMTPQSPKPSSHDVITGPW 608
Score = 153 bits (328), Expect(2) = 3e-043
Identities = 68/101 (67%), Positives = 74/101 (73%)
Frame = +1 / -2
Query: 256 TPYPGAPRPAALSAAVGVHCPVITAWHDGLLSRAFIQNHSAVLKDITGSVATRSGLLRRS 435
+P P A S G+H PVIT+W +GL IQNH+AVLKD SVATRSGLL RS
Sbjct: 661 SPRTQEPSLPAGSVPKGLHGPVITSWLEGLGDCGVIQNHNAVLKDTVASVATRSGLLSRS 482
Query: 436 TPMARPAGP*L*LKEIWMGPRPKYFLPGAHGHCGRGSQ*SD 558
PMARPAGP*L*L EIWMGPRPKYFLPGAHGHC G Q*S+
Sbjct: 481 APMARPAGP*L*LWEIWMGPRPKYFLPGAHGHCELGVQ*SE 359
Score = 41.8 bits (85), Expect(2) = 3e-043
Identities = 16/25 (64%), Positives = 17/25 (68%)
Frame = +3 / -3
Query: 204 GVRPVPALDPTVDDVGDHAVPWRAP 278
G P P L+PTVDDVGDH VP P
Sbjct: 711 GSCPAPELEPTVDDVGDHPVPRNPP 637
Score = 33.1 bits (66), Expect(3) = 2e-052
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = -2 / +1
Query: 266 GYGVITNIINGGI 228
GYGVITNIINGG+
Sbjct: 649 GYGVITNIINGGL 687
Score = 30.9 bits (61), Expect(3) = 2e-052
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = -2 / +2
Query: 233 GIECGHGTDPRVTDRIGFYKRY 168
G G G DPR T R GFYK Y
Sbjct: 683 GSNSGAGQDPRFT*RNGFYKPY 748
>gb|CA026694.1|CA026694 HZ56K16r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ56K16
5-PRIME, mRNA sequence
Length = 363
Score = 140 bits (300), Expect(2) = 9e-052
Identities = 50/65 (76%), Positives = 58/65 (89%)
Frame = -2 / +1
Query: 503 FGRGPIQISFNYNYGPAGRAIGVDLLNNPDLVATDPVISFKTALWFWMNARDNKPSCHAV 324
+GRGPIQ++ NYNYGPAGRAIGVDLLNNPDLVA+DP ++FKTA+WFWM + NKPSCH V
Sbjct: 13 YGRGPIQLTHNYNYGPAGRAIGVDLLNNPDLVASDPTVAFKTAIWFWMTTQSNKPSCHDV 192
Query: 323 ITGQW 309
ITG W
Sbjct: 193 ITGLW 207
Score = 122 bits (261), Expect = 2e-027
Identities = 56/89 (62%), Positives = 62/89 (69%)
Frame = +1 / -2
Query: 235 PLMMLVITPYPGAPRPAALSAAVGVHCPVITAWHDGLLSRAFIQNHSAVLKDITGSVATR 414
P +M ++ RPAALS AVG+H PVIT+WHDGLL IQN AVL GS ATR
Sbjct: 281 PPLMTLVITPYPGTRPAALSLAVGLHNPVITSWHDGLLDCVVIQNQIAVLNATVGSDATR 102
Query: 415 SGLLRRSTPMARPAGP*L*LKEIWMGPRP 501
SGL RSTP+ARPAGP*L*L WMGPRP
Sbjct: 101 SGLFSRSTPIARPAGP*L*LWVSWMGPRP 15
Score = 82.6 bits (174), Expect(2) = 9e-052
Identities = 30/39 (76%), Positives = 34/39 (87%)
Frame = -2 / +1
Query: 266 GYGVITNIINGGIECGHGTDPRVTDRIGFYKRYCDVFRI 150
GYGVITN+INGGIECG G + +V DRIGFYKRYCD+F I
Sbjct: 247 GYGVITNVINGGIECGKGQNDKVADRIGFYKRYCDIFGI 363
Score = 82.2 bits (173), Expect(2) = 5e-030
Identities = 40/75 (53%), Positives = 44/75 (58%)
Frame = +3 / -1
Query: 276 PAGRPVRSRGRPLPRDHGVARRLVVPRVHPEPQRCLEGYHGXXXXXXXXXXXXHADGSPR 455
P+GR V R P PRDH VARRLV R HPEP R LE + H D PR
Sbjct: 240 PSGRAVPGRRPPQPRDHVVARRLVGLRRHPEPNRRLERHRRVRRHQVRVVQQVHPDRPPR 61
Query: 456 RAVVVVEGDLDGAAA 500
R+VVVV G+LDGAAA
Sbjct: 60 RSVVVVVGELDGAAA 16
Score = 68.0 bits (142), Expect(2) = 5e-030
Identities = 30/40 (75%), Positives = 30/40 (75%)
Frame = +1 / -2
Query: 151 MRKTSQ*RL*KPIRSVTRGSVPCPHSIPPLMMLVITPYPG 270
M K SQ*RL* PIRS T P PHSIPPLM LVITPYPG
Sbjct: 362 MPKMSQ*RL*NPIRSATLSFCPLPHSIPPLMTLVITPYPG 243
>gb|BJ449472.1|BJ449472 BJ449472 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak25c19 5', mRNA sequence
Length = 540
Score = 114 bits (243), Expect(2) = 1e-051
Identities = 43/55 (78%), Positives = 46/55 (83%)
Frame = -2 / +2
Query: 473 NYNYGPAGRAIGVDLLNNPDLVATDPVISFKTALWFWMNARDNKPSCHAVITGQW 309
NYNYGPAGRAIG DLLNNPDLVATD +SFKTALWFWM + KPS H VITG+W
Sbjct: 5 NYNYGPAGRAIGADLLNNPDLVATDATVSFKTALWFWMTPQSPKPSSHDVITGRW 169
Score = 108 bits (231), Expect(2) = 1e-051
Identities = 40/53 (75%), Positives = 43/53 (81%)
Frame = -2 / +2
Query: 266 GYGVITNIINGGIECGHGTDPRVTDRIGFYKRYCDVFRIGYGSNLDCDGQRPF 108
GYGVITNIINGG+ECG G D RV DRIGFYKRYCD+ + YG NLDC QRPF
Sbjct: 209 GYGVITNIINGGLECGRGQDARVADRIGFYKRYCDLLGVSYGDNLDCYNQRPF 367
Score = 100 bits (212), Expect = 9e-021
Identities = 47/80 (58%), Positives = 55/80 (68%)
Frame = +1 / -1
Query: 235 PLMMLVITPYPGAPRPAALSAAVGVHCPVITAWHDGLLSRAFIQNHSAVLKDITGSVATR 414
P +M+++ PAA S G+H PVIT+W +GL IQNH+AVLKD SVATR
Sbjct: 243 PPLMMLVITPYPGTLPAAWSVPEGLHRPVITSWLEGLGDCGVIQNHNAVLKDTVASVATR 64
Query: 415 SGLLRRSTPMARPAGP*L*L 474
SGLL RS PMARPAGP*L*L
Sbjct: 63 SGLLSRSAPMARPAGP*L*L 4
Score = 93.6 bits (198), Expect(2) = 9e-027
Identities = 39/57 (68%), Positives = 45/57 (78%)
Frame = +3 / -3
Query: 108 EGPLAVAIEIAPVADAEDIAVALVEANPVGDPGVRPVPALDPTVDDVGDHAVPWRAP 278
E PL VA+++ VADAE+IAVALVE +PVG GV P PAL+PTVDDVGDHAVP P
Sbjct: 367 ERPLVVAVQVVSVADAEEIAVALVEPDPVGYAGVLPAPALEPTVDDVGDHAVPRHPP 197
Score = 46.0 bits (94), Expect(2) = 9e-027
Identities = 23/41 (56%), Positives = 25/41 (60%)
Frame = +3 / -3
Query: 270 RAPAGRPVRSRGRPLPRDHGVARRLVVPRVHPEPQRCLEGY 392
R P R V +RG P DH VARR R HPEPQR LEG+
Sbjct: 208 RHPPCRLVGARGAPPAGDHVVARRFG*LRRHPEPQRRLEGH 86
>gb|BJ459432.1|BJ459432 BJ459432 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak25c19 3', mRNA sequence
Length = 534
Score = 114 bits (243), Expect(2) = 1e-051
Identities = 43/55 (78%), Positives = 46/55 (83%)
Frame = -2 / -2
Query: 473 NYNYGPAGRAIGVDLLNNPDLVATDPVISFKTALWFWMNARDNKPSCHAVITGQW 309
NYNYGPAGRAIG DLLNNPDLVATD +SFKTALWFWM + KPS H VITG+W
Sbjct: 530 NYNYGPAGRAIGADLLNNPDLVATDATVSFKTALWFWMTPQSPKPSSHDVITGRW 366
Score = 108 bits (231), Expect(2) = 1e-051
Identities = 40/53 (75%), Positives = 43/53 (81%)
Frame = -2 / -2
Query: 266 GYGVITNIINGGIECGHGTDPRVTDRIGFYKRYCDVFRIGYGSNLDCDGQRPF 108
GYGVITNIINGG+ECG G D RV DRIGFYKRYCD+ + YG NLDC QRPF
Sbjct: 326 GYGVITNIINGGLECGRGQDARVADRIGFYKRYCDLLGVSYGDNLDCYNQRPF 168
Score = 100 bits (212), Expect = 9e-021
Identities = 47/80 (58%), Positives = 55/80 (68%)
Frame = +1 / +1
Query: 235 PLMMLVITPYPGAPRPAALSAAVGVHCPVITAWHDGLLSRAFIQNHSAVLKDITGSVATR 414
P +M+++ PAA S G+H PVIT+W +GL IQNH+AVLKD SVATR
Sbjct: 292 PPLMMLVITPYPGTLPAAWSVPEGLHRPVITSWLEGLGDCGVIQNHNAVLKDTVASVATR 471
Query: 415 SGLLRRSTPMARPAGP*L*L 474
SGLL RS PMARPAGP*L*L
Sbjct: 472 SGLLSRSAPMARPAGP*L*L 531
Score = 93.6 bits (198), Expect(2) = 9e-027
Identities = 39/57 (68%), Positives = 45/57 (78%)
Frame = +3 / +3
Query: 108 EGPLAVAIEIAPVADAEDIAVALVEANPVGDPGVRPVPALDPTVDDVGDHAVPWRAP 278
E PL VA+++ VADAE+IAVALVE +PVG GV P PAL+PTVDDVGDHAVP P
Sbjct: 168 ERPLVVAVQVVSVADAEEIAVALVEPDPVGYAGVLPAPALEPTVDDVGDHAVPRHPP 338
Score = 46.0 bits (94), Expect(2) = 9e-027
Identities = 23/41 (56%), Positives = 25/41 (60%)
Frame = +3 / +3
Query: 270 RAPAGRPVRSRGRPLPRDHGVARRLVVPRVHPEPQRCLEGY 392
R P R V +RG P DH VARR R HPEPQR LEG+
Sbjct: 327 RHPPCRLVGARGAPPAGDHVVARRFG*LRRHPEPQRRLEGH 449
>gb|BG416746.1|BG416746 HVSMEk0014F08f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0014F08f, mRNA sequence
Length = 682
Score = 177 bits (380), Expect(2) = 3e-050
Identities = 65/87 (74%), Positives = 72/87 (82%)
Frame = -2 / +1
Query: 569 RNPPSDYCEPRPQWPCAPGKKYFGRGPIQISFNYNYGPAGRAIGVDLLNNPDLVATDPVI 390
R SDYC P QWPCAPGK+Y+GRGPIQ+S NYNYGPAGRAIGVDLL NPDLVATD +
Sbjct: 322 RGASSDYCTPSAQWPCAPGKRYYGRGPIQLSHNYNYGPAGRAIGVDLLANPDLVATDATV 501
Query: 389 SFKTALWFWMNARDNKPSCHAVITGQW 309
+FKTA+WFWM A+ KPS HAVI GQW
Sbjct: 502 AFKTAIWFWMTAQPPKPSSHAVIAGQW 582
Score = 142 bits (305), Expect = 1e-033
Identities = 68/108 (62%), Positives = 72/108 (66%)
Frame = +1 / -3
Query: 235 PLMMLVITPYPGAPRPAALSAAVGVHCPVITAWHDGLLSRAFIQNHSAVLKDITGSVATR 414
P MM+V+ RPAA SA G+H P ITAW DGL A IQN AVL SVATR
Sbjct: 656 PPMMMVVITPNPGTRPAARSAHDGLHWPAITAWLDGLGGCAVIQNQMAVLNATVASVATR 477
Query: 415 SGLLRRSTPMARPAGP*L*LKEIWMGPRPKYFLPGAHGHCGRGSQ*SD 558
SGL RSTPMARPAGP*L*L E WMGPRP PGAHGHC G Q*S+
Sbjct: 476 SGLASRSTPMARPAGP*L*LWESWMGPRP**RFPGAHGHCALGVQ*SE 333
Score = 41.4 bits (84), Expect(2) = 3e-050
Identities = 15/20 (75%), Positives = 17/20 (85%)
Frame = -2 / +1
Query: 266 GYGVITNIINGGIECGHGTD 207
G+GVIT II GG +CGHGTD
Sbjct: 622 GFGVITTIIIGGNQCGHGTD 681
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 266,580,769
Number of Sequences: 312970
Number of extensions: 5318832
Number of successful extensions: 158237
Number of sequences better than 1.0e-020: 267
length of database: 58,378,179
effective HSP length: 51
effective length of database: 42,416,709
effective search space used: 5853505842
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)