TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3070703.2.1
(1214 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BQ759822.1|BQ759822 EBpi05_SQ004_B16_R pistil, 8 DPA, no... 383 e-122
gb|BQ759816.1|BQ759816 EBpi05_SQ004_A16_R pistil, 8 DPA, no... 346 e-111
gb|BG368552.1|BG368552 HVSMEi0019L05f Hordeum vulgare 20 DA... 352 2e-096
gb|AV928242.1|AV928242 AV928242 K. Sato unpublished cDNA li... 349 2e-095
gb|BJ467826.1|BJ467826 BJ467826 K. Sato unpublished cDNA li... 349 2e-095
gb|AV927421.1|AV927421 AV927421 K. Sato unpublished cDNA li... 327 7e-093
gb|BE195440.3|BE195440 HVSMEh0089K10f Hordeum vulgare 5-45 ... 255 4e-089
gb|BF627127.2|BF627127 HVSMEb0004A09f Hordeum vulgare seedl... 245 8e-089
gb|AV927437.1|AV927437 AV927437 K. Sato unpublished cDNA li... 311 6e-084
gb|BI956767.1|BI956767 HVSMEn0005D24f Hordeum vulgare rachi... 307 7e-083
gb|AL505573.1|AL505573 AL505573 Hordeum vulgare Barke roots... 216 2e-078
gb|BJ462342.1|BJ462342 BJ462342 K. Sato unpublished cDNA li... 291 5e-078
gb|BJ454539.1|BJ454539 BJ454539 K. Sato unpublished cDNA li... 253 4e-075
gb|BU974311.1|BU974311 HB27I16r BC Hordeum vulgare subsp. v... 253 1e-073
gb|BQ759817.1|BQ759817 EBpi05_SQ004_A17_R pistil, 8 DPA, no... 214 3e-073
gb|BJ466593.1|BJ466593 BJ466593 K. Sato unpublished cDNA li... 272 2e-072
gb|BJ463647.1|BJ463647 BJ463647 K. Sato unpublished cDNA li... 250 9e-070
gb|BF255654.2|BF255654 HVSMEf0007H02f Hordeum vulgare seedl... 248 2e-069
gb|CA022047.1|CA022047 HZ42A04r HZ Hordeum vulgare subsp. v... 255 4e-067
gb|BQ665583.1|BQ665583 HX04E07u HX Hordeum vulgare subsp. v... 248 3e-065
gb|BM374192.2|BM374192 EBma03_SQ003_O16_R maternal, 8 DPA, ... 241 5e-063
gb|BU975231.1|BU975231 HB30H20r BC Hordeum vulgare subsp. v... 231 2e-060
gb|BF630195.2|BF630195 HVSMEb0008E12f Hordeum vulgare seedl... 218 4e-056
gb|BQ472666.1|BQ472666 HB01N17r BC Hordeum vulgare subsp. v... 213 2e-054
gb|BQ759821.1|BQ759821 EBpi05_SQ004_B15 _R pistil, 8 DPA, n... 188 2e-052
gb|CA006313.1|CA006313 HU14I15u HU Hordeum vulgare subsp. v... 195 3e-049
gb|BG367217.1|BG367217 HVSMEi0011F11f Hordeum vulgare 20 DA... 186 3e-046
gb|BU973855.1|BU973855 HB26C19r BC Hordeum vulgare subsp. v... 177 1e-043
gb|CA027499.1|CA027499 HZ59C02r HZ Hordeum vulgare subsp. v... 160 1e-038
gb|BU996676.1|BU996676 HM14G05r HM Hordeum vulgare subsp. v... 153 2e-036
gb|BU975384.1|BU975384 HB31F04r BC Hordeum vulgare subsp. v... 82 2e-032
gb|BU971800.1|BU971800 HB19L11r BC Hordeum vulgare subsp. v... 61 6e-032
gb|AL503638.1|AL503638 AL503638 Hordeum vulgare Barke roots... 136 2e-031
gb|BE420919.1|BE420919 HWM003.H08 ITEC HWM Barley Leaf Libr... 62 2e-029
gb|BM816328.1|BM816328 HC108D12_SK.ab1 HC Hordeum vulgare s... 114 3e-029
gb|CA015170.1|CA015170 HT13H22r HT Hordeum vulgare subsp. v... 114 4e-027
gb|BE558753.3|BE558753 HV_CEb0020E08f Hordeum vulgare seedl... 61 1e-026
gb|CA013080.1|CA013080 HT07F09r HT Hordeum vulgare subsp. v... 67 8e-026
gb|CA013134.1|CA013134 HT07H24r HT Hordeum vulgare subsp. v... 115 6e-025
gb|BE216452.2|BE216452 HV_CEb0010I13f Hordeum vulgare seedl... 114 1e-024
gb|BM816326.1|BM816326 HB02F03_T3.ab1 HB Hordeum vulgare su... 114 1e-024
gb|BM816327.1|BM816327 HB106A04_SK.ab1 HB Hordeum vulgare s... 114 1e-024
gb|CB882476.1|CB882476 HL01P12w HL Hordeum vulgare subsp. v... 114 1e-024
gb|CA013313.1|CA013313 HT08A11r HT Hordeum vulgare subsp. v... 62 1e-024
gb|CA013755.1|CA013755 HT09G07r HT Hordeum vulgare subsp. v... 61 3e-024
gb|BJ463662.1|BJ463662 BJ463662 K. Sato unpublished cDNA li... 61 4e-024
gb|BU995681.1|BU995681 HM11A08r HM Hordeum vulgare subsp. v... 63 6e-024
gb|AV934345.1|AV934345 AV934345 K. Sato unpublished cDNA li... 110 2e-023
gb|BE195461.2|BE195461 HVSMEh0089L18f Hordeum vulgare 5-45 ... 104 2e-023
gb|AV912136.1|AV912136 AV912136 K. Sato unpublished cDNA li... 109 3e-023
gb|BU990717.1|BU990717 HF25N16r HF Hordeum vulgare subsp. v... 62 4e-023
gb|CA014629.1|CA014629 HT11O08r HT Hordeum vulgare subsp. v... 108 5e-023
gb|CK123613.1|CK123613 BES1824104l12 BES1824 Hordeum vulgar... 87 7e-023
gb|BM371846.2|BM371846 EBma08_SQ004_C16_R maternal, 28 DPA,... 61 7e-023
gb|AV922700.1|AV922700 AV922700 K. Sato unpublished cDNA li... 74 7e-023
gb|CA007755.1|CA007755 HU08O17r HU Hordeum vulgare subsp. v... 105 5e-022
gb|BU980650.1|BU980650 HA21E13r HA Hordeum vulgare subsp. v... 104 9e-022
gb|AV936911.1|AV936911 AV936911 K. Sato unpublished cDNA li... 62 1e-021
>gb|BQ759822.1|BQ759822 EBpi05_SQ004_B16_R pistil, 8 DPA, no treatment, cv Optic, EBpi05
Hordeum vulgare subsp. vulgare cDNA clone
EBpi05_SQ004_B16 5', mRNA sequence
Length = 646
Score = 383 bits (830), Expect(2) = e-122
Identities = 157/178 (88%), Positives = 167/178 (93%)
Frame = -1 / +1
Query: 848 KQSNMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAALGIIPGLKVRGTDY 669
K+SNMAVMILRYFNVIGSDPEGRLGEAPRPELREHG+ISGACFDAA GIIPGLKVRGTDY
Sbjct: 103 KKSNMAVMILRYFNVIGSDPEGRLGEAPRPELREHGKISGACFDAASGIIPGLKVRGTDY 282
Query: 668 STADGTCVRDYIDVTDLVDAHVKALGKAQPGKVGIYNVGTGQGRSVTEFVEACKKATGAS 489
TADGTCVRDYIDVTDLVDAHVKALGKA+P KVGIYNVGTG+GRSV EFVEACKKATGA+
Sbjct: 283 PTADGTCVRDYIDVTDLVDAHVKALGKAEPNKVGIYNVGTGKGRSVKEFVEACKKATGAT 462
Query: 488 IKVEYLARRPGDYAEVYSDPSKILMDLNWTAQYTDLGQSLAQAWKWQKAHPNGYASA* 315
IKV+YL RRPGDYAEVYS+PSKI +LNWTAQ+TDL +SLA AWKWQKAHP GY SA*
Sbjct: 463 IKVDYLDRRPGDYAEVYSNPSKIRDELNWTAQHTDLRESLATAWKWQKAHPGGYGSA* 636
Score = 319 bits (692), Expect(2) = 6e-094
Identities = 147/181 (81%), Positives = 154/181 (85%)
Frame = +1 / -3
Query: 307 ALNQADAYPFGCAFCHFHAWARLWPRSVYWAVQLRSMRIFDGSLYTSA*SPGLRARYSTL 486
A +QAD YP GCAFCHF A ARL RSV WAVQ S RI DG LYTSA*SPGLR+R STL
Sbjct: 644 APDQADPYPPGCAFCHFQAVARLSRRSVCWAVQFSSSRILDGLLYTSA*SPGLRSR*STL 465
Query: 487 IEAPVAFLQASTNSVTDLPWPVPTL*IPTLPG*ALPRAFT*ASTRSVTSM*SLTQVPSAV 666
+ APVAFL ASTNS TDLP+PVPTL*IPTL G ALPRA T*ASTRSVTSM*SLT VPSAV
Sbjct: 464 MVAPVAFLHASTNSFTDLPFPVPTL*IPTLLGSALPRALT*ASTRSVTSM*SLTHVPSAV 285
Query: 667 E*SVPRTFSPGMIPKAASKQAPDIRPCSRSSGLGASPSRPSGSDPITLKYLKIMTAIFDC 846
*SVPRTFSPGMIP AASK AP+I PCSRSSGLGASP RPSGSDPITLKYLKI+TA+FD
Sbjct: 284 G*SVPRTFSPGMIPDAASKHAPEIFPCSRSSGLGASPRRPSGSDPITLKYLKIITAMFDF 105
Query: 847 F 849
F
Sbjct: 104 F 102
Score = 202 bits (436), Expect(2) = 5e-056
Identities = 95/171 (55%), Positives = 116/171 (67%)
Frame = +3 / -2
Query: 327 ISVRVRLLPFPRLGKALAKIRVLGCPVEVHEDFRRIAVYLGIISRSTGKIFDLDRSSRCL 506
+S RVRLLPFP +ALA++RVLGCPV++ D R+AV+ G++ S ++ DLD S L
Sbjct: 624 VSARVRLLPFPGRREALAEVRVLGCPVQLVADLGRVAVHFGVVPGSPVEVVDLDGRSGRL 445
Query: 507 LASFYKLSH*STLACSDIVDSNFAWLSFTKSFYVSIYKICDIDVVSNASSICSGVIGSTN 686
LA FYKL H* T +D++D NF LSFTKSF +SI KI DI VV A SI S V+ S+N
Sbjct: 444 LARFYKLLH*PTFPRADVIDPNFVRLSFTKSFDMSINKISDIYVVPYACSISSRVVRSSN 265
Query: 687 L*PWNDSQSCIKASTGYPSMLA*LWPWSFS*PSLWV*SNHVEVS*DHDSHI 839
L*PWNDS C+K T SML PWSF SL V NH+EVS*DH SH+
Sbjct: 264 L*PWNDS*CCVKTRTRNLSMLTQFRPWSFPKASLRVRPNHIEVS*DHHSHV 112
Score = 122 bits (261), Expect(2) = 9e-034
Identities = 82/180 (45%), Positives = 95/180 (52%)
Frame = -2 / +2
Query: 844 NQIWLS*S*DTST*LDQTQRDG*EKLQGQSYASMDGYPVLALMQLWESFQG*RFVEPITP 665
N+ WL *S*DTS *L +T RD KLQG + SM+ + V L Q ESFQG*RF E T
Sbjct: 107 NRTWL**S*DTSM*LGRTLRDALGKLQGLNCVSMERFLVRVLTQHQESFQG*RFEERTTL 286
Query: 664 LQMELALETTSMSQIXXXXXXXXXXXLSQAKLESTMSEQAKVDQ*LSL*KLARRQRELLS 485
L ME A TT MS I LS KL S S + KV Q* SL*K ARR+ E S
Sbjct: 287 LLMEHA*GTT*MSLILLMLMSKLLVKLSLTKLGSITSARGKVGQ*RSL*KRARRRPERPS 466
Query: 484 RSNILPVDLEIMPRYTAIRRKSSWTSTGQPNTRILAKALPXXXXXXXXXXTDMRQPDSEL 305
RS D P+ TA R +S+ + TGQPNTR A+A D +PD L
Sbjct: 467 RSTTSTGDPGTTPKCTATRPRSATS*TGQPNTRTSARASRRPGNGRRRTRADTGRPDPVL 646
Score = 90.0 bits (190), Expect(3) = 1e-037
Identities = 42/82 (51%), Positives = 57/82 (69%)
Frame = -3 / +3
Query: 555 RNRPR*ISD*VCRSLQEGNGSFYQGRISCP*TWRLCRGIQRSVENPHGPQLDSPIHGSWP 376
R+ R*+S+ VCRS+QEG+ S +QGR+ P T L R +Q+ V++P +LDSP HG
Sbjct: 396 RHGER*VSEGVCRSVQEGDRSDHQGRLPRPETRGLRRSVQQPVQDPRRAELDSPTHGPPR 575
Query: 375 KPCPGVEMAEGAPERICVSLIQ 310
+P G+EMAEGAP RI V LI+
Sbjct: 576 EPRDGLEMAEGAPGRIRVGLIR 641
Score = 81.7 bits (172), Expect(3) = 9e-039
Identities = 42/73 (57%), Positives = 46/73 (63%)
Frame = +2 / -1
Query: 521 QTQSLIYLGLFRHCRFQLCLAELYQELLREHLQDL*HRCSL*RKFHLQWSNRFHEPLALE 700
QT SL YL R R QLC A+LYQEL EH QD *H CS R FH Q + F EPLALE
Sbjct: 430 QTPSLTYLSPCRRYRSQLC*AQLYQEL*HEHQQDQ*HLCSPLRMFHQQ*GSPFLEPLALE 251
Query: 701 *FPKLHQSKHRIS 739
*F L Q+ H+ S
Sbjct: 250 *FLMLRQNTHQKS 212
Score = 77.1 bits (162), Expect(2) = e-122
Identities = 30/42 (71%), Positives = 35/42 (83%)
Frame = -1 / +1
Query: 959 EPDTMPIVETTPQNPINPYGKAKKMAEDIILDFTKSKKQSNM 834
EPDT+PIVETTP PINPYGKAKKM+ED+ILDF+K + M
Sbjct: 1 EPDTLPIVETTPHIPINPYGKAKKMSEDMILDFSKKSNMAVM 126
Score = 65.7 bits (137), Expect(3) = 9e-039
Identities = 32/47 (68%), Positives = 35/47 (74%)
Frame = +1 / -3
Query: 817 LKIMTAIFDCFFDFVKSKMMSSAIFFALPYGLIGF*GVVSTIGIVSG 957
LK + I F F KS++MSS IFFALPYGLIG *GVVSTIG VSG
Sbjct: 143 LKYLKIITAMFDFFEKSRIMSSDIFFALPYGLIGM*GVVSTIGNVSG 3
Score = 59.7 bits (124), Expect(3) = 1e-037
Identities = 27/54 (50%), Positives = 31/54 (57%)
Frame = -3 / +3
Query: 843 IKYGCHDLKILQRDWIRPRGXXXXXXXXXXXXAWTDIRCLL*CSFGNHSRAKGS 682
I++GC DLKILQ DW+ P G AW D C+ * S NHSRAKGS
Sbjct: 108 IEHGCDDLKILQCDWVGP*GTPWGSSKA*TA*AWKDFWCVF*RSIRNHSRAKGS 269
Score = 51.9 bits (107), Expect(3) = 9e-039
Identities = 27/56 (48%), Positives = 32/56 (57%)
Frame = +2 / -1
Query: 314 IRLTHIRSGAPSAISTPGQGFGQDPCIGLSS*GP*GFSTDRCIPRHNLQVYGQDIR 481
IR T IR GAPSAIS P +G PC+GLSS G T C R + +V G+ R
Sbjct: 637 IRPTRIRPGAPSAISRPSRGSRGGPCVGLSSSARRGSWTGCCTLRRSPRVSGRGSR 470
Score = 50.1 bits (103), Expect(3) = 1e-037
Identities = 21/34 (61%), Positives = 25/34 (73%)
Frame = -3 / +3
Query: 957 T*YDAYCRNNSSESYQSIW*GKEDGGGHHLRFYK 856
T*+ AYCRN+SS +YQSIW GK+D GH F K
Sbjct: 3 T*HIAYCRNDSSHTYQSIWQGKKDVRGHDS*FLK 104
Score = 45.5 bits (93), Expect(2) = 6e-094
Identities = 19/33 (57%), Positives = 23/33 (69%)
Frame = +3 / -2
Query: 861 KI*DDVLRHLLCLTIWIDRILRSCFYNRHRIRF 959
+I + VL HL CL IWIDR +RS F NR +RF
Sbjct: 99 EIKNHVLGHLFCLAIWIDRYVRSRFDNRQCVRF 1
Score = 41.8 bits (85), Expect(2) = 9e-034
Identities = 21/38 (55%), Positives = 24/38 (63%)
Frame = -2 / +2
Query: 958 NLIRCLL*KQLLRILSIHMVRQRRWRRTSS*ILQNQRS 845
NL CLL K+LL LSIHM RQ+R RT I Q R+
Sbjct: 2 NLTHCLLSKRLLTYLSIHMARQKRCPRT*FLISQRNRT 115
Score = 36.3 bits (73), Expect(2) = 5e-056
Identities = 21/37 (56%), Positives = 22/37 (59%)
Frame = +2 / -1
Query: 848 SLIL*NLR*CPPPSSLPYHMD**DSEELFLQ*ASYQV 958
S+ L N CP S LP HMD** EE F Q*A QV
Sbjct: 112 SISLRNQESCPRTSFLPCHMD**VCEESFRQ*AMCQV 2
>gb|BQ759816.1|BQ759816 EBpi05_SQ004_A16_R pistil, 8 DPA, no treatment, cv Optic, EBpi05
Hordeum vulgare subsp. vulgare cDNA clone
EBpi05_SQ004_A16 5', mRNA sequence
Length = 587
Score = 346 bits (749), Expect(2) = e-111
Identities = 143/161 (88%), Positives = 153/161 (95%)
Frame = -1 / +1
Query: 848 KQSNMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAALGIIPGLKVRGTDY 669
K+SNMAVMILRYFNVIGSDPEGRLGEAPRPELREHG+ISGACFDAA GIIPGLKVRGTDY
Sbjct: 103 KKSNMAVMILRYFNVIGSDPEGRLGEAPRPELREHGKISGACFDAASGIIPGLKVRGTDY 282
Query: 668 STADGTCVRDYIDVTDLVDAHVKALGKAQPGKVGIYNVGTGQGRSVTEFVEACKKATGAS 489
TADGTCVRDYIDVTDLVDAHVKALGKA+P KVGIYNVGTG+GRSV EFVEACKKATGA+
Sbjct: 283 PTADGTCVRDYIDVTDLVDAHVKALGKAEPNKVGIYNVGTGKGRSVKEFVEACKKATGAT 462
Query: 488 IKVEYLARRPGDYAEVYSDPSKILMDLNWTAQYTDLGQSLA 366
IKV+YL RRPGDYAEVYS+PSKI +LNWTAQ+TDL +SLA
Sbjct: 463 IKVDYLDRRPGDYAEVYSNPSKIRDELNWTAQHTDLRESLA 585
Score = 285 bits (617), Expect(2) = 9e-083
Identities = 133/161 (82%), Positives = 139/161 (86%)
Frame = +1 / -1
Query: 367 ARLWPRSVYWAVQLRSMRIFDGSLYTSA*SPGLRARYSTLIEAPVAFLQASTNSVTDLPW 546
ARL RSV WAVQ S RI DG LYTSA*SPGLR+R STL+ APVAFL ASTNS TDLP+
Sbjct: 584 ARLSRRSVCWAVQFSSSRILDGLLYTSA*SPGLRSR*STLMVAPVAFLHASTNSFTDLPF 405
Query: 547 PVPTL*IPTLPG*ALPRAFT*ASTRSVTSM*SLTQVPSAVE*SVPRTFSPGMIPKAASKQ 726
PVPTL*IPTL G ALPRA T*ASTRSVTSM*SLT VPSAV *SVPRTFSPGMIP AASK
Sbjct: 404 PVPTL*IPTLLGSALPRALT*ASTRSVTSM*SLTHVPSAVG*SVPRTFSPGMIPDAASKH 225
Query: 727 APDIRPCSRSSGLGASPSRPSGSDPITLKYLKIMTAIFDCF 849
AP+I PCSRSSGLGASP RPSGSDPITLKYLKI+TA+FD F
Sbjct: 224 APEIFPCSRSSGLGASPRRPSGSDPITLKYLKIITAMFDFF 102
Score = 184 bits (397), Expect(2) = 2e-050
Identities = 87/157 (55%), Positives = 106/157 (67%)
Frame = +3 / -3
Query: 369 KALAKIRVLGCPVEVHEDFRRIAVYLGIISRSTGKIFDLDRSSRCLLASFYKLSH*STLA 548
KALA++RVLGCPV++ D R+AV+ G++ S ++ DLD S LLA FYKL H* T
Sbjct: 582 KALAEVRVLGCPVQLVADLGRVAVHFGVVPGSPVEVVDLDGRSGRLLARFYKLLH*PTFP 403
Query: 549 CSDIVDSNFAWLSFTKSFYVSIYKICDIDVVSNASSICSGVIGSTNL*PWNDSQSCIKAS 728
+D++D NF LSFTKSF +SI KI DI VV A SI S V+ S+NL*PWNDS C+K
Sbjct: 402 RADVIDPNFVRLSFTKSFDMSINKISDIYVVPYACSISSRVVRSSNL*PWNDS*CCVKTR 223
Query: 729 TGYPSMLA*LWPWSFS*PSLWV*SNHVEVS*DHDSHI 839
T SML PWSF SL V NH+EVS*DH SH+
Sbjct: 222 TRNLSMLTQFRPWSFPKASLRVRPNHIEVS*DHHSHV 112
Score = 122 bits (261), Expect(2) = 3e-035
Identities = 79/159 (49%), Positives = 91/159 (57%)
Frame = -2 / +2
Query: 844 NQIWLS*S*DTST*LDQTQRDG*EKLQGQSYASMDGYPVLALMQLWESFQG*RFVEPITP 665
N+ WL *S*DTS *L +T RD KLQG + SM+ + V L Q ESFQG*RF E T
Sbjct: 107 NRTWL**S*DTSM*LGRTLRDALGKLQGLNCVSMERFLVRVLTQHQESFQG*RFEERTTL 286
Query: 664 LQMELALETTSMSQIXXXXXXXXXXXLSQAKLESTMSEQAKVDQ*LSL*KLARRQRELLS 485
L ME A TT MS I LS KL S S + KV Q* SL*K ARR+ E S
Sbjct: 287 LLMEHA*GTT*MSLILLMLMSKLLVKLSLTKLGSITSARGKVGQ*RSL*KRARRRPERPS 466
Query: 484 RSNILPVDLEIMPRYTAIRRKSSWTSTGQPNTRILAKAL 368
RS D P+ TA R +S+ + TGQPNTR A+AL
Sbjct: 467 RSTTSTGDPGTTPKCTATRPRSATS*TGQPNTRTSARAL 583
Score = 81.7 bits (172), Expect(3) = 2e-030
Identities = 42/73 (57%), Positives = 46/73 (63%)
Frame = +2 / -2
Query: 521 QTQSLIYLGLFRHCRFQLCLAELYQELLREHLQDL*HRCSL*RKFHLQWSNRFHEPLALE 700
QT SL YL R R QLC A+LYQEL EH QD *H CS R FH Q + F EPLALE
Sbjct: 430 QTPSLTYLSPCRRYRSQLC*AQLYQEL*HEHQQDQ*HLCSPLRMFHQQ*GSPFLEPLALE 251
Query: 701 *FPKLHQSKHRIS 739
*F L Q+ H+ S
Sbjct: 250 *FLMLRQNTHQKS 212
Score = 75.8 bits (159), Expect(2) = e-111
Identities = 29/42 (69%), Positives = 35/42 (83%)
Frame = -1 / +1
Query: 959 EPDTMPIVETTPQNPINPYGKAKKMAEDIILDFTKSKKQSNM 834
EPDT+PIV+TTP PINPYGKAKKM+ED+ILDF+K + M
Sbjct: 1 EPDTLPIVQTTPHIPINPYGKAKKMSEDMILDFSKKSNMAVM 126
Score = 68.4 bits (143), Expect(3) = 6e-029
Identities = 30/63 (47%), Positives = 43/63 (68%)
Frame = -3 / +3
Query: 555 RNRPR*ISD*VCRSLQEGNGSFYQGRISCP*TWRLCRGIQRSVENPHGPQLDSPIHGSWP 376
R+ R*+S+ VCRS+QEG+ S +QGR+ P T L R +Q+ V++P +LDSP HG
Sbjct: 396 RHGER*VSEGVCRSVQEGDRSDHQGRLPRPETRGLRRSVQQPVQDPRRAELDSPTHGPPR 575
Query: 375 KPC 367
+PC
Sbjct: 576 EPC 584
Score = 62.5 bits (130), Expect(3) = 2e-030
Identities = 31/47 (65%), Positives = 34/47 (72%)
Frame = +1 / -1
Query: 817 LKIMTAIFDCFFDFVKSKMMSSAIFFALPYGLIGF*GVVSTIGIVSG 957
LK + I F F KS++MSS IFFALPYGLIG *GVV TIG VSG
Sbjct: 143 LKYLKIITAMFDFFEKSRIMSSDIFFALPYGLIGM*GVVWTIGNVSG 3
Score = 59.7 bits (124), Expect(3) = 6e-029
Identities = 27/54 (50%), Positives = 31/54 (57%)
Frame = -3 / +3
Query: 843 IKYGCHDLKILQRDWIRPRGXXXXXXXXXXXXAWTDIRCLL*CSFGNHSRAKGS 682
I++GC DLKILQ DW+ P G AW D C+ * S NHSRAKGS
Sbjct: 108 IEHGCDDLKILQCDWVGP*GTPWGSSKA*TA*AWKDFWCVF*RSIRNHSRAKGS 269
Score = 46.9 bits (96), Expect(2) = 3e-035
Identities = 20/34 (58%), Positives = 24/34 (70%)
Frame = -3 / +3
Query: 957 T*YDAYCRNNSSESYQSIW*GKEDGGGHHLRFYK 856
T*+ AYC N+SS +YQSIW GK+D GH F K
Sbjct: 3 T*HIAYCPNDSSHTYQSIWQGKKDVRGHDS*FLK 104
Score = 42.8 bits (87), Expect(2) = 9e-083
Identities = 18/33 (54%), Positives = 22/33 (66%)
Frame = +3 / -3
Query: 861 KI*DDVLRHLLCLTIWIDRILRSCFYNRHRIRF 959
+I + VL HL CL IWIDR +RS NR +RF
Sbjct: 99 EIKNHVLGHLFCLAIWIDRYVRSRLDNRQCVRF 1
Score = 41.8 bits (85), Expect(3) = 6e-029
Identities = 21/38 (55%), Positives = 24/38 (63%)
Frame = -2 / +2
Query: 958 NLIRCLL*KQLLRILSIHMVRQRRWRRTSS*ILQNQRS 845
NL CLL K+LL LSIHM RQ+R RT I Q R+
Sbjct: 2 NLTHCLLSKRLLTYLSIHMARQKRCPRT*FLISQRNRT 115
Score = 35.4 bits (71), Expect(2) = 2e-050
Identities = 21/37 (56%), Positives = 22/37 (59%)
Frame = +2 / -2
Query: 848 SLIL*NLR*CPPPSSLPYHMD**DSEELFLQ*ASYQV 958
S+ L N CP S LP HMD** EE F Q*A QV
Sbjct: 112 SISLRNQESCPRTSFLPCHMD**VCEESFGQ*AMCQV 2
Score = 27.2 bits (53), Expect(3) = 2e-030
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = +2 / -2
Query: 368 QGFGQDPCIGLSS*GP*GFSTDRCIPRHNLQVYGQDIR 481
QG PC+GLSS G T C R + +V G+ R
Sbjct: 583 QGSRGGPCVGLSSSARRGSWTGCCTLRRSPRVSGRGSR 470
>gb|BG368552.1|BG368552 HVSMEi0019L05f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0019L05f, mRNA sequence
Length = 618
Score = 352 bits (763), Expect = 2e-096
Identities = 142/176 (80%), Positives = 157/176 (89%)
Frame = -1 / +2
Query: 848 KQSNMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAALGIIPGLKVRGTDY 669
++SNM+VMILRYFNVIGSDPEGRLGEAP PELREHGRISGACFDAALGIIPGLKV+GTDY
Sbjct: 50 RKSNMSVMILRYFNVIGSDPEGRLGEAPPPELREHGRISGACFDAALGIIPGLKVKGTDY 229
Query: 668 STADGTCVRDYIDVTDLVDAHVKALGKAQPGKVGIYNVGTGQGRSVTEFVEACKKATGAS 489
T DGTCVRDYIDVTDLVDAHVKAL KA+ GKVGIYNVGTG+GRSV EFVEACKKATG
Sbjct: 230 ETPDGTCVRDYIDVTDLVDAHVKALNKAERGKVGIYNVGTGRGRSVKEFVEACKKATGVD 409
Query: 488 IKVEYLARRPGDYAEVYSDPSKILMDLNWTAQYTDLGQSLAQAWKWQKAHPNGYAS 321
IKV+Y RRPGDYAEVYS+P++I +LNWTAQ+T+L +SL W WQK H NGYA+
Sbjct: 410 IKVDYFPRRPGDYAEVYSNPARINRELNWTAQHTELPESLRGRWTWQKNHRNGYAT 577
Score = 258 bits (558), Expect = 4e-068
Identities = 121/171 (70%), Positives = 131/171 (76%)
Frame = +1 / -1
Query: 331 PFGCAFCHFHAWARLWPRSVYWAVQLRSMRIFDGSLYTSA*SPGLRARYSTLIEAPVAFL 510
PF FCH H RL SV WAVQ S I G LYTSA*SPG R + STL+ PVAFL
Sbjct: 567 PFRWFFCHVHRPLRLSGSSVCWAVQFSSRLILAGLLYTSA*SPGRRGK*STLMSTPVAFL 388
Query: 511 QASTNSVTDLPWPVPTL*IPTLPG*ALPRAFT*ASTRSVTSM*SLTQVPSAVE*SVPRTF 690
QASTNS TDLP PVPTL +PTLP AL AFT ASTRSVTSM*SLTQVPS V *SVP TF
Sbjct: 387 QASTNSFTDLPLPVPTLYMPTLPLSALLSAFTWASTRSVTSM*SLTQVPSGVS*SVPLTF 208
Query: 691 SPGMIPKAASKQAPDIRPCSRSSGLGASPSRPSGSDPITLKYLKIMTAIFD 843
PG+IP AASK APDIRPCSR+SG GASPS PSGS+P+TLKYL+I+T +FD
Sbjct: 207 KPGIIPSAASKHAPDIRPCSRNSGGGASPSLPSGSEPMTLKYLRIITDMFD 55
Score = 143 bits (306), Expect = 2e-033
Identities = 74/172 (43%), Positives = 109/172 (63%)
Frame = +3 / -3
Query: 327 ISVRVRLLPFPRLGKALAKIRVLGCPVEVHEDFRRIAVYLGIISRSTGKIFDLDRSSRCL 506
I+V V LLP P +AL + VLGCPV D +AV+ I++ + ++ DLD S L
Sbjct: 571 IAVPVVLLPCPPTPEALWEFGVLGCPV*FAVDPCGVAVHFRIVTGAAREVVDLDVDSGRL 392
Query: 507 LASFYKLSH*STLACSDIVDSNFAWLSFTKSFYVSIYKICDIDVVSNASSICSGVIGSTN 686
LASF+KL H* T + ++IV +NFA L + F+V IY++ +IDV+S+AS + S V+G+ +
Sbjct: 391 LASFHKLLH*PTSSGANIVYANFASLRLVERFHVGIYQVGNIDVISHASPVGSFVVGTFD 212
Query: 687 L*PWNDSQSCIKASTGYPSMLA*LWPWSFS*PSLWV*SNHVEVS*DHDSHI* 842
L W+ S C++A Y +MLA WS + S WV ++ VEVS DH+ H+*
Sbjct: 211 LQTWDYS*CCVEACARYTAMLAQFRWWSLTQSSFWVRTDDVEVSQDHN*HV* 56
>gb|AV928242.1|AV928242 AV928242 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd27i15 3', mRNA sequence
Length = 678
Score = 349 bits (757), Expect = 2e-095
Identities = 141/177 (79%), Positives = 157/177 (88%)
Frame = -1 / -1
Query: 848 KQSNMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAALGIIPGLKVRGTDY 669
++S+M+VMILRYFNVIGSDPEGRLGEAP PELREHGRISGACFDAALGIIPGLKV+GTDY
Sbjct: 645 RKSDMSVMILRYFNVIGSDPEGRLGEAPPPELREHGRISGACFDAALGIIPGLKVKGTDY 466
Query: 668 STADGTCVRDYIDVTDLVDAHVKALGKAQPGKVGIYNVGTGQGRSVTEFVEACKKATGAS 489
T DGTCVRDYIDVTDLVDAHVKAL KA+ GKVGIYNVGTG+GRSV EFVEACKKATG
Sbjct: 465 ETPDGTCVRDYIDVTDLVDAHVKALNKAERGKVGIYNVGTGRGRSVKEFVEACKKATGVD 286
Query: 488 IKVEYLARRPGDYAEVYSDPSKILMDLNWTAQYTDLGQSLAQAWKWQKAHPNGYASA 318
IKV Y RRPGDYAEVYS+P++I +LNWTAQ+T+L +SL AW WQK H +GYA +
Sbjct: 285 IKVHYFPRRPGDYAEVYSNPARINRELNWTAQHTELQESLRVAWTWQKKHRSGYADS 115
Score = 256 bits (553), Expect = 2e-067
Identities = 120/171 (70%), Positives = 130/171 (76%)
Frame = +1 / +2
Query: 331 PFGCAFCHFHAWARLWPRSVYWAVQLRSMRIFDGSLYTSA*SPGLRARYSTLIEAPVAFL 510
P C FCH HA RL SV WAVQ S I G LYTSA*SPG R + TL+ PVAFL
Sbjct: 128 PLRCFFCHVHATLRLSWSSVCWAVQFSSRLILAGLLYTSA*SPGRRGK*WTLMSTPVAFL 307
Query: 511 QASTNSVTDLPWPVPTL*IPTLPG*ALPRAFT*ASTRSVTSM*SLTQVPSAVE*SVPRTF 690
QASTNS TDLP PVPTL +PTLP AL AFT ASTRSVTSM*SLTQVPS V *SVP TF
Sbjct: 308 QASTNSFTDLPLPVPTLYMPTLPLSALLSAFTWASTRSVTSM*SLTQVPSGVS*SVPLTF 487
Query: 691 SPGMIPKAASKQAPDIRPCSRSSGLGASPSRPSGSDPITLKYLKIMTAIFD 843
PG+IP AASK APDIRPCSR+SG GASPS PSGS+P+TLKYL+I+T + D
Sbjct: 488 KPGIIPSAASKHAPDIRPCSRNSGGGASPSLPSGSEPMTLKYLRIITDMSD 640
Score = 146 bits (314), Expect = 2e-034
Identities = 75/172 (43%), Positives = 109/172 (63%)
Frame = +3 / +1
Query: 327 ISVRVRLLPFPRLGKALAKIRVLGCPVEVHEDFRRIAVYLGIISRSTGKIFDLDRSSRCL 506
I+ V LLP PR +AL + VLGCPV D +AV+ I++ + ++ DLD S L
Sbjct: 124 IAAPVLLLPCPRDPEALLEFGVLGCPV*FAVDPCGVAVHFRIVTGAAREVVDLDVDSGRL 303
Query: 507 LASFYKLSH*STLACSDIVDSNFAWLSFTKSFYVSIYKICDIDVVSNASSICSGVIGSTN 686
LASF+KL H* T + ++IV +NFA L + F+V IY++ DIDV+S+AS + S V+G+ +
Sbjct: 304 LASFHKLLH*PTSSGANIVYANFASLRLVERFHVGIYQVGDIDVISHASPVGSFVVGTFD 483
Query: 687 L*PWNDSQSCIKASTGYPSMLA*LWPWSFS*PSLWV*SNHVEVS*DHDSHI* 842
L W+ S C++A Y +MLA WS + S WV ++ VEVS DH+ H+*
Sbjct: 484 LQTWDYS*CCVEACARYTAMLAQFRWWSLTQSSFWVRTDDVEVSQDHN*HV* 639
>gb|BJ467826.1|BJ467826 BJ467826 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags29p06 3', mRNA sequence
Length = 658
Score = 349 bits (757), Expect = 2e-095
Identities = 141/177 (79%), Positives = 157/177 (88%)
Frame = -1 / -2
Query: 848 KQSNMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAALGIIPGLKVRGTDY 669
++S+M+VMILRYFNVIGSDPEGRLGEAP PELREHGRISGACFDAALGIIPGLKV+GTDY
Sbjct: 648 RKSDMSVMILRYFNVIGSDPEGRLGEAPPPELREHGRISGACFDAALGIIPGLKVKGTDY 469
Query: 668 STADGTCVRDYIDVTDLVDAHVKALGKAQPGKVGIYNVGTGQGRSVTEFVEACKKATGAS 489
T DGTCVRDYIDVTDLVDAHVKAL KA+ GKVGIYNVGTG+GRSV EFVEACKKATG
Sbjct: 468 ETPDGTCVRDYIDVTDLVDAHVKALNKAERGKVGIYNVGTGRGRSVKEFVEACKKATGVD 289
Query: 488 IKVEYLARRPGDYAEVYSDPSKILMDLNWTAQYTDLGQSLAQAWKWQKAHPNGYASA 318
IKV Y RRPGDYAEVYS+P++I +LNWTAQ+T+L +SL AW WQK H +GYA +
Sbjct: 288 IKVHYFPRRPGDYAEVYSNPARINRELNWTAQHTELQESLRVAWTWQKKHRSGYADS 118
Score = 256 bits (553), Expect = 2e-067
Identities = 120/171 (70%), Positives = 130/171 (76%)
Frame = +1 / +2
Query: 331 PFGCAFCHFHAWARLWPRSVYWAVQLRSMRIFDGSLYTSA*SPGLRARYSTLIEAPVAFL 510
P C FCH HA RL SV WAVQ S I G LYTSA*SPG R + TL+ PVAFL
Sbjct: 131 PLRCFFCHVHATLRLSWSSVCWAVQFSSRLILAGLLYTSA*SPGRRGK*WTLMSTPVAFL 310
Query: 511 QASTNSVTDLPWPVPTL*IPTLPG*ALPRAFT*ASTRSVTSM*SLTQVPSAVE*SVPRTF 690
QASTNS TDLP PVPTL +PTLP AL AFT ASTRSVTSM*SLTQVPS V *SVP TF
Sbjct: 311 QASTNSFTDLPLPVPTLYMPTLPLSALLSAFTWASTRSVTSM*SLTQVPSGVS*SVPLTF 490
Query: 691 SPGMIPKAASKQAPDIRPCSRSSGLGASPSRPSGSDPITLKYLKIMTAIFD 843
PG+IP AASK APDIRPCSR+SG GASPS PSGS+P+TLKYL+I+T + D
Sbjct: 491 KPGIIPSAASKHAPDIRPCSRNSGGGASPSLPSGSEPMTLKYLRIITDMSD 643
Score = 146 bits (314), Expect = 2e-034
Identities = 75/172 (43%), Positives = 109/172 (63%)
Frame = +3 / +1
Query: 327 ISVRVRLLPFPRLGKALAKIRVLGCPVEVHEDFRRIAVYLGIISRSTGKIFDLDRSSRCL 506
I+ V LLP PR +AL + VLGCPV D +AV+ I++ + ++ DLD S L
Sbjct: 127 IAAPVLLLPCPRDPEALLEFGVLGCPV*FAVDPCGVAVHFRIVTGAAREVVDLDVDSGRL 306
Query: 507 LASFYKLSH*STLACSDIVDSNFAWLSFTKSFYVSIYKICDIDVVSNASSICSGVIGSTN 686
LASF+KL H* T + ++IV +NFA L + F+V IY++ DIDV+S+AS + S V+G+ +
Sbjct: 307 LASFHKLLH*PTSSGANIVYANFASLRLVERFHVGIYQVGDIDVISHASPVGSFVVGTFD 486
Query: 687 L*PWNDSQSCIKASTGYPSMLA*LWPWSFS*PSLWV*SNHVEVS*DHDSHI* 842
L W+ S C++A Y +MLA WS + S WV ++ VEVS DH+ H+*
Sbjct: 487 LQTWDYS*CCVEACARYTAMLAQFRWWSLTQSSFWVRTDDVEVSQDHN*HV* 642
>gb|AV927421.1|AV927421 AV927421 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd2a02 3', mRNA sequence
Length = 691
Score = 327 bits (708), Expect(3) = 7e-093
Identities = 132/164 (80%), Positives = 144/164 (87%)
Frame = -1 / -1
Query: 809 NVIGSDPEGRLGEAPRPELREHGRISGACFDAALGIIPGLKVRGTDYSTADGTCVRDYID 630
NVIGSDPEGRLGEAP PELREHGRISGACFDAALGIIPGLKV+GTDY T DGTCVRDYID
Sbjct: 607 NVIGSDPEGRLGEAPPPELREHGRISGACFDAALGIIPGLKVKGTDYETPDGTCVRDYID 428
Query: 629 VTDLVDAHVKALGKAQPGKVGIYNVGTGQGRSVTEFVEACKKATGASIKVEYLARRPGDY 450
VTDLVDAHVKAL KA+ GKVGIYNVGTG+GRSV EFVEACKKATG IKV Y RRPGDY
Sbjct: 427 VTDLVDAHVKALNKAERGKVGIYNVGTGRGRSVKEFVEACKKATGVDIKVHYFPRRPGDY 248
Query: 449 AEVYSDPSKILMDLNWTAQYTDLGQSLAQAWKWQKAHPNGYASA 318
AEVYS+P++I +LNWTAQ+T+L +SL AW WQK H +GYA +
Sbjct: 247 AEVYSNPARINRELNWTAQHTELQESLRVAWTWQKKHRSGYADS 116
Score = 240 bits (519), Expect(2) = 4e-063
Identities = 113/161 (70%), Positives = 121/161 (75%)
Frame = +1 / +3
Query: 331 PFGCAFCHFHAWARLWPRSVYWAVQLRSMRIFDGSLYTSA*SPGLRARYSTLIEAPVAFL 510
P C FCH HA RL SV WAVQ S I G LYTSA*SPG R + TL+ PVAFL
Sbjct: 129 PLRCFFCHVHATLRLSWSSVCWAVQFSSRLILAGLLYTSA*SPGRRGK*WTLMSTPVAFL 308
Query: 511 QASTNSVTDLPWPVPTL*IPTLPG*ALPRAFT*ASTRSVTSM*SLTQVPSAVE*SVPRTF 690
QASTNS TDLP PVPTL +PTLP AL AFT ASTRSVTSM*SLTQVPS V *SVP TF
Sbjct: 309 QASTNSFTDLPLPVPTLYMPTLPLSALLSAFTWASTRSVTSM*SLTQVPSGVS*SVPLTF 488
Query: 691 SPGMIPKAASKQAPDIRPCSRSSGLGASPSRPSGSDPITLK 813
PG+IP AASK APDIRPCSR+SG GASPS PSGS+P+T +
Sbjct: 489 KPGIIPSAASKHAPDIRPCSRNSGGGASPSLPSGSEPMTFE 611
Score = 132 bits (282), Expect = 5e-030
Identities = 68/161 (42%), Positives = 100/161 (62%)
Frame = +3 / +2
Query: 327 ISVRVRLLPFPRLGKALAKIRVLGCPVEVHEDFRRIAVYLGIISRSTGKIFDLDRSSRCL 506
I+ V LLP PR +AL + VLGCPV D +AV+ I++ + ++ DLD S L
Sbjct: 125 IAAPVLLLPCPRDPEALLEFGVLGCPV*FAVDPCGVAVHFRIVTGAAREVVDLDVDSGRL 304
Query: 507 LASFYKLSH*STLACSDIVDSNFAWLSFTKSFYVSIYKICDIDVVSNASSICSGVIGSTN 686
LASF+KL H* T + ++IV +NFA L + F+V IY++ DIDV+S+AS + S V+G+ +
Sbjct: 305 LASFHKLLH*PTSSGANIVYANFASLRLVERFHVGIYQVGDIDVISHASPVGSFVVGTFD 484
Query: 687 L*PWNDSQSCIKASTGYPSMLA*LWPWSFS*PSLWV*SNHV 809
L W+ S C++A Y +MLA WS + S WV ++ V
Sbjct: 485 LQTWDYS*CCVEACARYTAMLAQFRWWSLTQSSFWVRTDDV 607
Score = 28.6 bits (56), Expect(3) = 7e-093
Identities = 11/13 (84%), Positives = 13/13 (100%)
Frame = -1 / -2
Query: 893 KKMAEDIILDFTK 855
KKMAEDIILDF++
Sbjct: 690 KKMAEDIILDFSQ 652
Score = 25.4 bits (49), Expect(3) = 7e-093
Identities = 9/13 (69%), Positives = 13/13 (100%)
Frame = -1 / -3
Query: 848 KQSNMAVMILRYF 810
++S+M+VMILRYF
Sbjct: 647 RKSDMSVMILRYF 609
Score = 22.1 bits (42), Expect(2) = 4e-063
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = +1 / +2
Query: 862 KSKMMSSAIF 891
KSKM+SSAIF
Sbjct: 659 KSKMISSAIF 688
>gb|BE195440.3|BE195440 HVSMEh0089K10f Hordeum vulgare 5-45 DAP spike EST library HVcDNA0009
(5 to 45 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEh0089K10f, mRNA sequence
Length = 988
Score = 255 bits (551), Expect(4) = 4e-089
Identities = 107/124 (86%), Positives = 112/124 (90%)
Frame = -1 / +1
Query: 1205 EPGRLQFIYADLGDAKAVKKIFSENAFDAVMHFAAVAYVGESTMEPLRYYHNITSNTLTV 1026
EPGRLQFIY DLGDAKAV K+FSENAFDAVMHFAAVAYVGEST EPLR YHNITSNTLTV
Sbjct: 121 EPGRLQFIYTDLGDAKAVNKMFSENAFDAVMHFAAVAYVGESTQEPLRCYHNITSNTLTV 300
Query: 1025 LEAMAAYNVNTLIYSSTCATYGEPDTMPIVETTPQNPINPYGKAKKMAEDIILDFTKSKK 846
LEAMAA+NV TLIYSSTCATYGEPDTMPIVETTPQ PINPYG AKKM+EDIILDF+K
Sbjct: 301 LEAMAAHNVKTLIYSSTCATYGEPDTMPIVETTPQIPINPYGMAKKMSEDIILDFSKKSN 480
Query: 845 QSNM 834
+ M
Sbjct: 481 MAVM 492
Score = 220 bits (474), Expect(3) = 5e-059
Identities = 106/130 (81%), Positives = 110/130 (84%)
Frame = +1 / -3
Query: 817 LKIMTAIFDCFFDFVKSKMMSSAIFFALPYGLIGF*GVVSTIGIVSGSP*VAHVLE*IRV 996
LK + I F F KS+MMSS IFFA+PYGLIG *GVVSTIGIVSGSP VA VLE*IRV
Sbjct: 509 LKYLKIITAMFDFFEKSRMMSSDIFFAMPYGLIGI*GVVSTIGIVSGSPYVAQVLE*IRV 330
Query: 997 FTLYAAIASRTVNVFDVMLW*YLSGSIVLSPT*ATAAKCITASNAFSENIFFTALASPKS 1176
FTL AAIAS TVNVFDVMLW*+LSGS VLSPT*ATAAKCITASNAFSENI FTA ASPKS
Sbjct: 329 FTLCAAIASSTVNVFDVMLW*HLSGSCVLSPT*ATAAKCITASNAFSENILFTAFASPKS 150
Query: 1177 A*IN*SLPGS 1206
IN*SLPGS
Sbjct: 149 VYIN*SLPGS 120
Score = 196 bits (422), Expect(5) = 1e-064
Identities = 77/112 (68%), Positives = 91/112 (81%)
Frame = +3 / -2
Query: 861 KI*DDVLRHLLCLTIWIDRILRSCFYNRHRIRFTIGCTRTRVNQSIYIICCHCLKNCQCV 1040
+I +DVL HL C IWIDR LRSCF NRH +RFTI CT TRVNQS YI+CCHCLK+CQ +
Sbjct: 465 EIKNDVLGHLFCHAIWIDRYLRSCFDNRHCVRFTICCTSTRVNQSFYIMCCHCLKHCQRI 286
Query: 1041 RCYVVVVPEWLHCALTNISNSSKVHNSVKCILRKYFLHSFGIA*VSINKLKP 1196
CYVVV P WL CALTNISN KVHNS+K +LRK+F+HSF ++*+S+ KLKP
Sbjct: 285 *CYVVVAP*WLLCALTNISNRGKVHNSIKRVLRKHFVHSFCVS*ISVYKLKP 130
Score = 146 bits (314), Expect(4) = 4e-049
Identities = 57/78 (73%), Positives = 69/78 (88%)
Frame = -3 / +3
Query: 1089 W*EHNGATQVLPQHNIEHIDSS*GNGSI*CKYSDLLEYVCNLW*T*YDAYCRNNSSESYQ 910
W*EH GAT+VLPQHNI+++DS+*GNGS *CK SDLLEY+CN+W*T*++AYCRNNSS++YQ
Sbjct: 237 W*EHTGATKVLPQHNIKYVDSA*GNGST*CKNSDLLEYLCNIW*T*HNAYCRNNSSDTYQ 416
Query: 909 SIW*GKEDGGGHHLRFYK 856
SIW GK+D GHH F K
Sbjct: 417 SIWHGKKDVRGHHS*FLK 470
Score = 119 bits (254), Expect(4) = 3e-033
Identities = 53/73 (72%), Positives = 56/73 (76%)
Frame = +2 / -1
Query: 863 NLR*CPPPSSLPYHMD**DSEELFLQ*ASYQVHHRLHTYSSKSEYLHYMLPLPQELSMCS 1042
N *CP S LP HMD** SEELF Q*A QVHH LH YSSKSE+LHY+LPLPQ LS
Sbjct: 463 NQE*CPRTSFLPCHMD**VSEELFRQ*ALCQVHHMLHKYSSKSEFLHYVLPLPQALSTYL 284
Query: 1043 MLCCGST*VAPLC 1081
MLCCGST VAP+C
Sbjct: 283 MLCCGSTLVAPVC 245
Score = 106 bits (227), Expect(2) = 3e-024
Identities = 63/117 (53%), Positives = 68/117 (58%)
Frame = -2 / +2
Query: 1195 GFSLFMLT*AMPKL*RKYFRRMHXXXXXXXXXXXXLVRAQWSHSGXXXXXXXXX*QFLRQ 1016
GFSL+ L * KL* K FRR LVRA SH G *Q LRQ
Sbjct: 131 GFSLYTLI*ETQKL*TKCFRRTRLMLLCTLPRLLMLVRAHRSH*GATTT*HQIR*QCLRQ 310
Query: 1015 WQHIM*IL*FTRVRVQPMVNLIRCLL*KQLLRILSIHMVRQRRWRRTSS*ILQNQRS 845
WQHIM* L*FTRV VQ MVNL +CLL KQLLR LSIHM Q+R RTS I Q ++
Sbjct: 311 WQHIM*KL*FTRVLVQHMVNLTQCLLSKQLLRYLSIHMAWQKRCPRTSFLISQRNQT 481
Score = 55.6 bits (115), Expect(4) = 4e-089
Identities = 23/29 (79%), Positives = 24/29 (82%)
Frame = -1 / +1
Query: 848 KQSNMAVMILRYFNVIGSDPEGRLGEAPR 762
K+SNMAVMI RYFNVIGSDP GRLG R
Sbjct: 469 KKSNMAVMIFRYFNVIGSDPXGRLGGCSR 555
Score = 51.5 bits (106), Expect(5) = 1e-064
Identities = 20/25 (80%), Positives = 22/25 (88%)
Frame = +1 / -3
Query: 775 PSRPSGSDPITLKYLKIMTAIFDCF 849
P RP GSDPITLKYLKI+TA+FD F
Sbjct: 542 PRRPXGSDPITLKYLKIITAMFDFF 468
Score = 51.0 bits (105), Expect(4) = 4e-089
Identities = 28/57 (49%), Positives = 34/57 (59%)
Frame = -1 / +2
Query: 734 SGACFDAALGIIPGLKVRGTDYSTADGTCVRDYIDVTDLVDAHVKALGKAQPGKVGI 564
S A FDAA GIIPG +V+ T Y GT R DLV+A+V GKA+ KVG+
Sbjct: 581 SRAWFDAASGIIPG*RVQETTYLLLMGTA*RTTXMSLDLVEAYV*TSGKAEAYKVGM 751
Score = 37.7 bits (76), Expect(4) = 4e-049
Identities = 15/25 (60%), Positives = 20/25 (80%)
Frame = -3 / +3
Query: 1206 RTRKASVYLC*LRRCQSCEENIFGE 1132
R +ASVY+ * RR +SCE+N+FGE
Sbjct: 120 RAWEASVYIH*FRRRKSCEQNVFGE 194
Score = 35.4 bits (71), Expect(4) = 4e-049
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = -3 / +3
Query: 843 IKYGCHDLKILQRDWIRP 790
IK+GC DL+ILQ DW+ P
Sbjct: 474 IKHGCDDLQILQCDWVGP 527
Score = 32.2 bits (64), Expect(4) = 4e-049
Identities = 14/23 (60%), Positives = 14/23 (60%)
Frame = -1 / +1
Query: 692 LKVRGTDYSTADGTCVRDYIDVT 624
LK D TADG CV DYI VT
Sbjct: 622 LKGPRNDLPTADGNCVTDYIXVT 690
Score = 29.9 bits (59), Expect(4) = 3e-033
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +3 / -2
Query: 801 NHVEVS*DHDSHI*LL 848
NH+EVS DH SH+* L
Sbjct: 516 NHIEVSEDHHSHV*FL 469
Score = 26.7 bits (52), Expect(5) = 1e-064
Identities = 14/26 (53%), Positives = 15/26 (57%)
Frame = +1 / -2
Query: 652 VPSAVE*SVPRTFSPGMIPKAASKQA 729
VP + * V T PGMIP AAS A
Sbjct: 663 VPISSR*VVSWTL*PGMIPDAASNHA 586
Score = 25.8 bits (50), Expect(5) = 1e-064
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = +1 / -2
Query: 565 IPTLPG*ALPRAFT*ASTRS 624
IPTL A P +T ASTRS
Sbjct: 750 IPTLYASAFPEVYTYASTRS 691
Score = 25.4 bits (49), Expect(4) = 4e-089
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -1 / +3
Query: 761 PELREHGRI 735
PELREHGRI
Sbjct: 555 PELREHGRI 581
Score = 25.4 bits (49), Expect(2) = 3e-024
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = -2 / +2
Query: 844 NQIWLS*S*DTST*LDQTQRD 782
NQ WL *S DTS *L +T D
Sbjct: 473 NQTWL**SSDTSM*LGRTLXD 535
Score = 25.4 bits (49), Expect(3) = 5e-059
Identities = 14/23 (60%), Positives = 15/23 (65%)
Frame = +1 / -3
Query: 625 VTSM*SLTQVPSAVE*SVPRTFS 693
VT M*S+TQ PSAV S FS
Sbjct: 689 VTXM*SVTQFPSAVGRSFLGPFS 621
Score = 24.4 bits (47), Expect(4) = 3e-033
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +2 / -1
Query: 1136 PKIFSSQLWHRLSQHK*TEAFRVL 1207
PK F SQL L+Q *TEA + L
Sbjct: 190 PKTFCSQLLRLLNQCI*TEASQAL 119
Score = 24.4 bits (47), Expect(4) = 3e-033
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +2 / -1
Query: 626 *HRCSL*RKFHLQWSNRFHEPLA 694
*H CS R H Q RF +PLA
Sbjct: 688 *HXCSPLRSSHQQ*VGRFLDPLA 620
Score = 22.1 bits (42), Expect(5) = 1e-064
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +1 / -1
Query: 736 IRPCSRSSGL 765
I PCSRSSG+
Sbjct: 580 ILPCSRSSGV 551
Score = 22.1 bits (42), Expect(3) = 5e-059
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = +3 / -1
Query: 696 WNDSQSCIKAST 731
WNDS C+K T
Sbjct: 619 WNDS*CCVKPRT 584
>gb|BF627127.2|BF627127 HVSMEb0004A09f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0004A09f, mRNA sequence
Length = 751
Score = 245 bits (530), Expect(3) = 1e-076
Identities = 101/122 (82%), Positives = 111/122 (90%)
Frame = -1 / +2
Query: 848 KQSNMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAALGIIPGLKVRGTDY 669
++S+M+VMILRYFNVIGSDPEGRLGEAP PELREHGRISGACFDAALGIIPGLKV+GTDY
Sbjct: 347 RKSDMSVMILRYFNVIGSDPEGRLGEAPPPELREHGRISGACFDAALGIIPGLKVKGTDY 526
Query: 668 STADGTCVRDYIDVTDLVDAHVKALGKAQPGKVGIYNVGTGQGRSVTEFVEACKKATGAS 489
T DGTCVRDYIDVTDLVDAHVKAL KA+ GKVGIYNVGTG+ RSV EFVEACK+ ++
Sbjct: 527 ETPDGTCVRDYIDVTDLVDAHVKALNKAERGKVGIYNVGTGRSRSVKEFVEACKRRPEST 706
Query: 488 IK 483
K
Sbjct: 707 SK 712
Score = 238 bits (515), Expect(4) = 1e-071
Identities = 97/125 (77%), Positives = 111/125 (88%)
Frame = -1 / +2
Query: 1196 RLQFIYADLGDAKAVKKIFSENAFDAVMHFAAVAYVGESTMEPLRYYHNITSNTLTVLEA 1017
RLQFI+ADLGDAKAV +IF+ENAFDAVMHFAAVAYVGEST+EPLRYYHNIT +TL VLEA
Sbjct: 2 RLQFIHADLGDAKAVNRIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITGDTLVVLEA 181
Query: 1016 MAAYNVNTLIYSSTCATYGEPDTMPIVETTPQNPINPYGKAKKMAEDIILDFTKSKKQSN 837
MA +NV TLIYSSTCATYGEP+ MP+ E TPQ PINPYGKAKKMAED+ILDF+KS+K
Sbjct: 182 MAMHNVKTLIYSSTCATYGEPEKMPMTEETPQFPINPYGKAKKMAEDVILDFSKSRKSDM 361
Query: 836 MAVMI 822
+++
Sbjct: 362 SVMIL 376
Score = 182 bits (392), Expect(2) = 8e-089
Identities = 85/112 (75%), Positives = 93/112 (83%)
Frame = +1 / -2
Query: 508 LQASTNSVTDLPWPVPTL*IPTLPG*ALPRAFT*ASTRSVTSM*SLTQVPSAVE*SVPRT 687
LQASTNS TDL PVPTL +PTLP AL AFT ASTRSVTSM*SLTQVPS V *SVP T
Sbjct: 687 LQASTNSFTDLLLPVPTLYMPTLPLSALLSAFTWASTRSVTSM*SLTQVPSGVS*SVPLT 508
Query: 688 FSPGMIPKAASKQAPDIRPCSRSSGLGASPSRPSGSDPITLKYLKIMTAIFD 843
F PG+IP AASK APDIRPCSR+SG GASPS PSGS+P+TLKYL+I+T + D
Sbjct: 507 FKPGIIPSAASKHAPDIRPCSRNSGGGASPSLPSGSEPMTLKYLRIITDMSD 352
Score = 166 bits (356), Expect(2) = 8e-089
Identities = 82/114 (71%), Positives = 87/114 (76%)
Frame = +1 / -2
Query: 847 FFDFVKSKMMSSAIFFALPYGLIGF*GVVSTIGIVSGSP*VAHVLE*IRVFTLYAAIASR 1026
F D KSKM SSAIF ALPYG +G GV S IGI SGSP*VAHVLE*IRV TL A+AS
Sbjct: 351 FLDLEKSKMTSSAIFLALPYGFMGNWGVSSVIGIFSGSP*VAHVLE*IRVLTLCIAMASS 172
Query: 1027 TVNVFDVMLW*YLSGSIVLSPT*ATAAKCITASNAFSENIFFTALASPKSA*IN 1188
T V VML *YL GS VLSPT*ATAAKC+TASNAFS NI TA ASP+SA +N
Sbjct: 171 TTRVSPVML**YLRGSSVLSPT*ATAAKCMTASNAFSANILLTAFASPRSACMN 10
Score = 106 bits (227), Expect(2) = 3e-043
Identities = 52/115 (45%), Positives = 76/115 (66%)
Frame = +3 / -1
Query: 498 RCLLASFYKLSH*STLACSDIVDSNFAWLSFTKSFYVSIYKICDIDVVSNASSICSGVIG 677
R LASF+KL H* T + ++IV +NFA L + F+V IY++ DIDV+S+AS + S V+G
Sbjct: 697 RSPLASFHKLLH*PTSSGANIVYANFASLRLVERFHVGIYQVGDIDVISHASPVGSFVVG 518
Query: 678 STNL*PWNDSQSCIKASTGYPSMLA*LWPWSFS*PSLWV*SNHVEVS*DHDSHI* 842
+ +L W+ S C++A Y +MLA WS + S WV ++ VEVS DH+ H+*
Sbjct: 517 TFDLQTWDYS*CCVEACARYTAMLAQFRWWSLTQSSFWVRTDDVEVSQDHN*HV* 353
Score = 89.5 bits (189), Expect(2) = 3e-043
Identities = 45/108 (41%), Positives = 68/108 (62%)
Frame = +3 / -1
Query: 870 DDVLRHLLCLTIWIDRILRSCFYNRHRIRFTIGCTRTRVNQSIYIICCHCLKNCQCVRCY 1049
+D+L H L L I + L S F +RH + F +G T RV+Q I+ H + Q +
Sbjct: 328 NDILCHFLGLAIRVYGKLGSFFSHRHLLGFPVGGTCARVDQGFNIVHRHGF*HDQSISSD 149
Query: 1050 VVVVPEWLHCALTNISNSSKVHNSVKCILRKYFLHSFGIA*VSINKLK 1193
V++VP+ L AL +ISN SKVH+S+KCI +Y ++SF IA*+S+ +L+
Sbjct: 148 VMIVPQRLKRALAHISNGSKVHDSIKCIFCEYSVNSFCIA*ISMYELQ 5
Score = 52.8 bits (109), Expect(3) = 1e-076
Identities = 27/79 (34%), Positives = 44/79 (55%)
Frame = -3 / +1
Query: 1083 EHNGATQVLPQHNIEHIDSS*GNGSI*CKYSDLLEYVCNLW*T*YDAYCRNNSSESYQSI 904
EH A++VL H+ + + +G C DLL ++C+L T DAY NS S++ +
Sbjct: 115 EHA*ASEVLS*HHWRYSGRARSHGDAQC*NPDLL*HMCHLRGTREDAYD*RNSPVSHKPV 294
Query: 903 W*GKEDGGGHHLRFYKIKE 847
W G+E+G G H +++E
Sbjct: 295 WQGQENGRGCHFGLLQVQE 351
Score = 35.9 bits (72), Expect(4) = 1e-071
Identities = 32/73 (43%), Positives = 36/73 (49%)
Frame = -2 / +3
Query: 844 NQIWLS*S*DTST*LDQTQRDG*EKLQGQSYASMDGYPVLALMQLWESFQG*RFVEPITP 665
NQ *S*DTST TQ++ +L + ASM Y A Q E Q *R P T
Sbjct: 351 NQTCQL*S*DTSTSSVLTQKEDWVRLHHLNCASMAVYLAHASTQH*E*SQV*RSKVPTTK 530
Query: 664 LQMELALETTSMS 626
L LA E TSMS
Sbjct: 531 LPTGLA*EITSMS 569
Score = 30.9 bits (61), Expect(4) = 1e-071
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = -3 / +1
Query: 564 LQCRNRPR*ISD*VCRSLQEGNG 496
+QC +R +*+S+ VC SLQE G
Sbjct: 631 IQCWHRKK*VSEGVCGSLQEATG 699
Score = 28.1 bits (55), Expect(3) = 1e-076
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = -3 / +1
Query: 1191 SVYLC*LRRCQSCEENI 1141
+V+ C* RRC+SC +NI
Sbjct: 7 AVHTC*SRRCKSC*QNI 57
Score = 23.1 bits (44), Expect(4) = 1e-071
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -1 / +1
Query: 509 KKATGASIKVEYLARRPG 456
++ATG I+V+Y PG
Sbjct: 685 QEATGVDIQVDYFRAGPG 738
>gb|AV927437.1|AV927437 AV927437 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd2b02 3', mRNA sequence
Length = 532
Score = 311 bits (673), Expect = 6e-084
Identities = 128/162 (79%), Positives = 140/162 (86%)
Frame = -1 / -2
Query: 803 IGSDPEGRLGEAPRPELREHGRISGACFDAALGIIPGLKVRGTDYSTADGTCVRDYIDVT 624
IGSDPEGRLGEAP ELREHGRISGACFDAALGIIPGLKV+GTDY T DGTCVRDYIDVT
Sbjct: 531 IGSDPEGRLGEAPPLELREHGRISGACFDAALGIIPGLKVKGTDYETPDGTCVRDYIDVT 352
Query: 623 DLVDAHVKALGKAQPGKVGIYNVGTGQGRSVTEFVEACKKATGASIKVEYLARRPGDYAE 444
DLVDAHVKAL KA+ GKVGIYNVGTG+GRSV EFVEACKKATG IKV Y RRPGDYAE
Sbjct: 351 DLVDAHVKALNKAERGKVGIYNVGTGRGRSVKEFVEACKKATGVDIKVHYFPRRPGDYAE 172
Query: 443 VYSDPSKILMDLNWTAQYTDLGQSLAQAWKWQKAHPNGYASA 318
VYS+P++I +LNWTAQ+T+L +SL A WQK H +GYA +
Sbjct: 171 VYSNPARINRELNWTAQHTELQESLRVA*TWQKKHRSGYADS 46
Score = 232 bits (501), Expect = 3e-060
Identities = 110/158 (69%), Positives = 118/158 (74%)
Frame = +1 / +2
Query: 331 PFGCAFCHFHAWARLWPRSVYWAVQLRSMRIFDGSLYTSA*SPGLRARYSTLIEAPVAFL 510
P C FCH +A RL SV WAVQ S I G LYTSA*SPG R + TL+ PVAFL
Sbjct: 59 PLRCFFCHVYATLRLSWSSVCWAVQFSSRLILAGLLYTSA*SPGRRGK*WTLMSTPVAFL 238
Query: 511 QASTNSVTDLPWPVPTL*IPTLPG*ALPRAFT*ASTRSVTSM*SLTQVPSAVE*SVPRTF 690
QASTNS TDLP PVPTL +PTLP AL AFT ASTRSVTSM*SLTQVPS V *SVP TF
Sbjct: 239 QASTNSFTDLPLPVPTLYMPTLPLSALLSAFTWASTRSVTSM*SLTQVPSGVS*SVPLTF 418
Query: 691 SPGMIPKAASKQAPDIRPCSRSSGLGASPSRPSGSDPI 804
PG+IP AASK APDIRPCSR+S GASPS PSGS+P+
Sbjct: 419 KPGIIPSAASKHAPDIRPCSRNSSGGASPSLPSGSEPM 532
Score = 127 bits (271), Expect = 2e-028
Identities = 66/156 (42%), Positives = 96/156 (61%)
Frame = +3 / +1
Query: 327 ISVRVRLLPFPRLGKALAKIRVLGCPVEVHEDFRRIAVYLGIISRSTGKIFDLDRSSRCL 506
I+ V LLP R +AL + VLGCPV D +AV+ I++ + ++ DLD S L
Sbjct: 55 IAAPVLLLPCLRDPEALLEFGVLGCPV*FAVDPCGVAVHFRIVTGAAREVVDLDVDSGRL 234
Query: 507 LASFYKLSH*STLACSDIVDSNFAWLSFTKSFYVSIYKICDIDVVSNASSICSGVIGSTN 686
LASF+KL H* T + ++IV +NFA L + F+V IY++ DIDV+S+AS + S V+G+ +
Sbjct: 235 LASFHKLLH*PTSSGANIVYANFASLRLVERFHVGIYQVGDIDVISHASPVGSFVVGTFD 414
Query: 687 L*PWNDSQSCIKASTGYPSMLA*LWPWSFS*PSLWV 794
L W+ S C++A Y +MLA WS + S WV
Sbjct: 415 LQTWDYS*CCVEACARYTAMLAQFKWWSLTQSSFWV 522
>gb|BI956767.1|BI956767 HVSMEn0005D24f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0005D24f, mRNA sequence
Length = 1150
Score = 307 bits (665), Expect = 7e-083
Identities = 124/159 (77%), Positives = 137/159 (86%)
Frame = -1 / +1
Query: 812 FNVIGSDPEGRLGEAPRPELREHGRISGACFDAALGIIPGLKVRGTDYSTADGTCVRDYI 633
FNVIGSDP GRLGEAP PELREHGRISGACF A LGIIP LKV+GTDY T DGTCVRDYI
Sbjct: 1 FNVIGSDPXGRLGEAPPPELREHGRISGACFHAXLGIIPRLKVKGTDYETPDGTCVRDYI 180
Query: 632 DVTDLVDAHVKALGKAQPGKVGIYNVGTGQGRSVTEFVEACKKATGASIKVEYLARRPGD 453
DVTDLVDAHVKAL KA+ GKVGIYNVGTG+GRS+ EFVEACKKATG IKV+Y RRPGD
Sbjct: 181 DVTDLVDAHVKALNKAERGKVGIYNVGTGRGRSMKEFVEACKKATGVDIKVDYFPRRPGD 360
Query: 452 YAEVYSDPSKILMDLNWTAQYTDLGQSLAQAWKWQKAHP 336
YAEV+S+P++I +LNWTAQ+T+L +SL AW WQK P
Sbjct: 361 YAEVFSNPARINRELNWTAQHTELQESLTVAWTWQKKTP 477
Score = 223 bits (482), Expect = 1e-057
Identities = 108/158 (68%), Positives = 115/158 (72%)
Frame = +1 / -3
Query: 337 GCAFCHFHAWARLWPRSVYWAVQLRSMRIFDGSLYTSA*SPGLRARYSTLIEAPVAFLQA 516
G FCH HA RL SV WAVQ S I G L TSA*SPG R + STL+ PVAFLQA
Sbjct: 476 GVFFCHVHATVRLS*SSVCWAVQFSSRLILAGLLNTSA*SPGRRGK*STLMSTPVAFLQA 297
Query: 517 STNSVTDLPWPVPTL*IPTLPG*ALPRAFT*ASTRSVTSM*SLTQVPSAVE*SVPRTFSP 696
STNS DLP PVPTL +PTLP AL AFT ASTRSVTSM*SLTQVPS V *SVP TF
Sbjct: 296 STNSFIDLPLPVPTLYMPTLPLSALLSAFTWASTRSVTSM*SLTQVPSGVS*SVPLTFKR 117
Query: 697 GMIPKAASKQAPDIRPCSRSSGLGASPSRPSGSDPITL 810
G+IP A K APDIRPCSR+SG GASPS P GS+P+TL
Sbjct: 116 GIIPSXAWKHAPDIRPCSRNSGGGASPSLPXGSEPMTL 3
Score = 129 bits (276), Expect = 3e-029
Identities = 66/155 (42%), Positives = 96/155 (61%)
Frame = +3 / -2
Query: 348 LPFPRLGKALAKIRVLGCPVEVHEDFRRIAVYLGIISRSTGKIFDLDRSSRCLLASFYKL 527
LP PR +AL K VLGCPV D +A + I++ + ++ DLD S LLASF+KL
Sbjct: 465 LPCPRDREALLKFGVLGCPV*FAVDPCGVAEHFRIVTGAAREVVDLDVDSGRLLASFHKL 286
Query: 528 SH*STLACSDIVDSNFAWLSFTKSFYVSIYKICDIDVVSNASSICSGVIGSTNL*PWNDS 707
H* T + ++IV +NFA L + F+V IY++ DIDV+S+AS + S V+G+ +L W+ S
Sbjct: 285 FH*PTSSGANIVYANFASLRLVERFHVGIYQVGDIDVISHASPVGSFVVGTFDLQTWDYS 106
Query: 708 QSCIKASTGYPSMLA*LWPWSFS*PSLWV*SNHVE 812
C++A Y +MLA WS + S WV ++ VE
Sbjct: 105 *XCVEARARYTAMLAQFRWWSLTQSSXWVRTDDVE 1
>gb|AL505573.1|AL505573 AL505573 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW08O06V 5', mRNA sequence
Length = 450
Score = 216 bits (467), Expect(2) = 2e-078
Identities = 90/109 (82%), Positives = 95/109 (87%)
Frame = -1 / +1
Query: 1160 KAVKKIFSENAFDAVMHFAAVAYVGESTMEPLRYYHNITSNTLTVLEAMAAYNVNTLIYS 981
KA K+FSENAFDAVMHFAAVAYVGEST EPLRYYHNI SNTLT LEAMAA+NV TLIYS
Sbjct: 22 KAANKMFSENAFDAVMHFAAVAYVGESTQEPLRYYHNIXSNTLTXLEAMAAHNVKTLIYS 201
Query: 980 STCATYGEPDTMPIVETTPQNPINPYGKAKKMAEDIILDFTKSKKQSNM 834
STCATYGEPDTMPIVETTP PINPYGKAKKM+ED ILDF+K + M
Sbjct: 202 STCATYGEPDTMPIVETTPHIPINPYGKAKKMSEDXILDFSKKSNMAVM 348
Score = 188 bits (404), Expect = 7e-047
Identities = 91/114 (79%), Positives = 93/114 (81%)
Frame = +1 / -2
Query: 817 LKIMTAIFDCFFDFVKSKMMSSAIFFALPYGLIGF*GVVSTIGIVSGSP*VAHVLE*IRV 996
LK + I F F KS+ MSS IFFALPYGLIG *GVVSTIGIVSGSP VA VLE*IRV
Sbjct: 365 LKYLKIITAMFDFFEKSRXMSSDIFFALPYGLIGM*GVVSTIGIVSGSPYVAQVLE*IRV 186
Query: 997 FTLYAAIASRTVNVFDVMLW*YLSGSIVLSPT*ATAAKCITASNAFSENIFFTA 1158
FTL AAIAS VNVFD MLW*YLSGS VLSPT*ATAAKCITASNAFSENI F A
Sbjct: 185 FTLCAAIASSXVNVFDXMLW*YLSGSCVLSPT*ATAAKCITASNAFSENILFAA 24
Score = 166 bits (356), Expect(2) = 2e-058
Identities = 66/100 (66%), Positives = 77/100 (77%)
Frame = +3 / -1
Query: 861 KI*DDVLRHLLCLTIWIDRILRSCFYNRHRIRFTIGCTRTRVNQSIYIICCHCLKNCQCV 1040
+I + VL HL CL IWIDR +RSCF NRH +RF I CT T VNQS YI+CCHCLK CQ +
Sbjct: 321 EIKNXVLGHLFCLAIWIDRYVRSCFDNRHCVRFXICCTSTXVNQSFYIMCCHCLKXCQRI 142
Query: 1041 RCYVVVVPEWLHCALTNISNSSKVHNSVKCILRKYFLHSF 1160
YVVVVP WL CALTNISN KVHNS++ +LRK+F+ SF
Sbjct: 141 *XYVVVVP*WLLCALTNISNRGKVHNSIERVLRKHFVRSF 22
Score = 131 bits (281), Expect(3) = 4e-038
Identities = 52/78 (66%), Positives = 63/78 (80%)
Frame = -3 / +3
Query: 1089 W*EHNGATQVLPQHNIEHIDSS*GNGSI*CKYSDLLEYVCNLW*T*YDAYCRNNSSESYQ 910
W*EH GAT+VLPQH I+++D +*GNGS *CK SDLL Y+CN+W T*++AYCRNNSS +YQ
Sbjct: 93 W*EHTGATKVLPQHXIKYVDXA*GNGST*CKNSDLLXYLCNIWXT*HNAYCRNNSSHTYQ 272
Query: 909 SIW*GKEDGGGHHLRFYK 856
SIW GK+D GH F K
Sbjct: 273 SIWQGKKDVRGHXS*FLK 326
Score = 108 bits (230), Expect(2) = 2e-031
Identities = 50/78 (64%), Positives = 54/78 (69%)
Frame = +2 / -3
Query: 848 SLIL*NLR*CPPPSSLPYHMD**DSEELFLQ*ASYQVHHRLHTYSSKSEYLHYMLPLPQE 1027
S+ L N CP S LP HMD** EELF Q*A QV H LH Y SKSE+LHY+LPLPQ
Sbjct: 334 SISLRNQEXCPRTSFLPCHMD**VCEELFRQ*ALCQVXHMLHKYXSKSEFLHYVLPLPQA 155
Query: 1028 LSMCSMLCCGST*VAPLC 1081
LS M CCGST VAP+C
Sbjct: 154 LSTYLMXCCGSTLVAPVC 101
Score = 96.8 bits (205), Expect(2) = 2e-078
Identities = 39/42 (92%), Positives = 40/42 (95%)
Frame = -1 / +1
Query: 848 KQSNMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGAC 723
K+SNMAVMILRYFNVIG PEGRLGEAPRPELREHGRISGAC
Sbjct: 325 KKSNMAVMILRYFNVIGXXPEGRLGEAPRPELREHGRISGAC 450
Score = 81.3 bits (171), Expect(2) = 2e-058
Identities = 33/41 (80%), Positives = 36/41 (87%)
Frame = +1 / -2
Query: 727 APDIRPCSRSSGLGASPSRPSGSDPITLKYLKIMTAIFDCF 849
AP+I PCSRSSGLGASP RPSG PITLKYLKI+TA+FD F
Sbjct: 446 APEILPCSRSSGLGASPRRPSGXXPITLKYLKIITAMFDFF 324
Score = 48.3 bits (99), Expect(2) = 2e-031
Identities = 22/37 (59%), Positives = 24/37 (64%)
Frame = +3 / -1
Query: 729 TGYPSMLA*LWPWSFS*PSLWV*SNHVEVS*DHDSHI 839
T PSML PWSF SL V NH+EVS*DH SH+
Sbjct: 444 TRNPSMLTQFRPWSFPKASLRVRPNHIEVS*DHHSHV 334
Score = 39.1 bits (79), Expect(3) = 4e-038
Identities = 17/40 (42%), Positives = 20/40 (50%)
Frame = -3 / +3
Query: 843 IKYGCHDLKILQRDWIRPRGXXXXXXXXXXXXAWTDIRCL 724
I++GC DLKILQ DW P G AW D C+
Sbjct: 330 IEHGCDDLKILQCDWXXP*GTPWGSSKA*TA*AWKDFWCV 449
Score = 26.3 bits (51), Expect(3) = 4e-038
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = -3 / +3
Query: 1170 RRCQSCEENIFGE 1132
R +SCE+N+FGE
Sbjct: 12 RDAESCEQNVFGE 50
>gb|BJ462342.1|BJ462342 BJ462342 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak24n03 3', mRNA sequence
Length = 699
Score = 291 bits (630), Expect = 5e-078
Identities = 113/145 (77%), Positives = 131/145 (90%)
Frame = -1 / -2
Query: 755 LREHGRISGACFDAALGIIPGLKVRGTDYSTADGTCVRDYIDVTDLVDAHVKALGKAQPG 576
LREHGRISGACFDAALG+I GLKV+G DY TADGTC+RDYIDVTDLVDAHVKAL KA+P
Sbjct: 698 LREHGRISGACFDAALGVISGLKVKGIDYPTADGTCIRDYIDVTDLVDAHVKALNKAKPS 519
Query: 575 KVGIYNVGTGQGRSVTEFVEACKKATGASIKVEYLARRPGDYAEVYSDPSKILMDLNWTA 396
KVGIYNVGTG+GRSV EFV+ACK+ATG IK+EYL+RRPGDYAEV+SDP+KI +LNWTA
Sbjct: 518 KVGIYNVGTGRGRSVKEFVDACKQATGVDIKIEYLSRRPGDYAEVFSDPTKINNELNWTA 339
Query: 395 QYTDLGQSLAQAWKWQKAHPNGYAS 321
Q+TDL +SL+ AW+WQK+HP GY +
Sbjct: 338 QHTDLKESLSVAWRWQKSHPRGYGA 264
Score = 205 bits (443), Expect = 3e-052
Identities = 101/142 (71%), Positives = 108/142 (76%)
Frame = +1 / +1
Query: 331 PFGCAFCHFHAWARLWPRSVYWAVQLRSMRIFDGSLYTSA*SPGLRARYSTLIEAPVAFL 510
P GC FCH HA RL RSV AVQL S+ I GSL TSA*SPGL RYS L+ PVA L
Sbjct: 274 PRGCDFCHLHATDRLSLRSVC*AVQLSSLLILVGSLNTSA*SPGLLLRYSILMSTPVACL 453
Query: 511 QASTNSVTDLPWPVPTL*IPTLPG*ALPRAFT*ASTRSVTSM*SLTQVPSAVE*SVPRTF 690
QASTNS+T+ P PVPTL*+PTL G AL AFT*ASTRSVTSM*SL QVPSAV *S+P TF
Sbjct: 454 QASTNSLTERPLPVPTL*MPTLLGFALLSAFT*ASTRSVTSM*SLMQVPSAVG*SIPLTF 633
Query: 691 SPGMIPKAASKQAPDIRPCSRS 756
+P M P AASK APDI PCSRS
Sbjct: 634 NPEMTPSAASKHAPDILPCSRS 699
Score = 114 bits (244), Expect = 9e-025
Identities = 61/143 (42%), Positives = 86/143 (60%)
Frame = +3 / +3
Query: 327 ISVRVRLLPFPRLGKALAKIRVLGCPVEVHEDFRRIAVYLGIISRSTGKIFDLDRSSRCL 506
I+ R+RLLP P +A +I +L PVE D R+ Y I+S ++ + D + CL
Sbjct: 270 IAPRMRLLPPPCDRQAFLEIGMLSSPVEFVVDLGRVTEYFSIVSWPPAEVLNFDVNPGCL 449
Query: 507 LASFYKLSH*STLACSDIVDSNFAWLSFTKSFYVSIYKICDIDVVSNASSICSGVIGSTN 686
LA KL + +T + ++IV++NF L + F++SIY ICDI+VVS A SI +I S N
Sbjct: 450 LAGIDKLLNGATSSSANIVNANFTRLCLVECFHMSIY*ICDINVVSYAGSISCRIIYSFN 629
Query: 687 L*PWNDSQSCIKASTGYPSMLA* 755
L NDS CIKA + Y SML+*
Sbjct: 630 LQS*NDS*CCIKACSRYSSMLS* 698
>gb|BJ454539.1|BJ454539 BJ454539 K. Sato unpublished cDNA library, cv. Akashinriki vegetative
stage leaves Hordeum vulgare subsp. vulgare cDNA clone
baak24n03 5', mRNA sequence
Length = 629
Score = 253 bits (546), Expect(2) = 4e-075
Identities = 105/124 (84%), Positives = 112/124 (90%)
Frame = -1 / +1
Query: 1205 EPGRLQFIYADLGDAKAVKKIFSENAFDAVMHFAAVAYVGESTMEPLRYYHNITSNTLTV 1026
EPGRLQFIYADLGD K+V KIFSENAFDAVMHFAAVAYVGESTMEPLRYYHNITSNTL +
Sbjct: 211 EPGRLQFIYADLGDQKSVNKIFSENAFDAVMHFAAVAYVGESTMEPLRYYHNITSNTLLI 390
Query: 1025 LEAMAAYNVNTLIYSSTCATYGEPDTMPIVETTPQNPINPYGKAKKMAEDIILDFTKSKK 846
LEAMA++ V TLIYSSTCATYGEP+ MPI+ETTPQ PINPYGKAKKMAEDIILDF+K
Sbjct: 391 LEAMASHGVKTLIYSSTCATYGEPEKMPIIETTPQLPINPYGKAKKMAEDIILDFSKRTD 570
Query: 845 QSNM 834
S M
Sbjct: 571 MSVM 582
Score = 177 bits (382), Expect = 8e-044
Identities = 93/130 (71%), Positives = 99/130 (76%)
Frame = +1 / -1
Query: 817 LKIMTAIFDCFFDFVKSKMMSSAIFFALPYGLIGF*GVVSTIGIVSGSP*VAHVLE*IRV 996
LK + + D F KS MMSSAIF A P GLIG *GVVS IGI SGSP*VA VLE*I V
Sbjct: 599 LKYLKIMTDISVLFEKSSMMSSAIFLAFP*GLIGN*GVVSIIGIFSGSP*VAQVLE*ISV 420
Query: 997 FTLYAAIASRTVNVFDVMLW*YLSGSIVLSPT*ATAAKCITASNAFSENIFFTALASPKS 1176
T AIAS+ VFDV+L *YL GSIVLSPT*ATAAKCITASNAFSENI FT SP+S
Sbjct: 419 LTP*EAIASKISKVFDVIL**YLRGSIVLSPT*ATAAKCITASNAFSENILFTDF*SPRS 240
Query: 1177 A*IN*SLPGS 1206
A*+N*SLPGS
Sbjct: 239 A*MN*SLPGS 210
Score = 105 bits (225), Expect(2) = 3e-028
Identities = 49/111 (44%), Positives = 69/111 (62%)
Frame = +3 / -3
Query: 861 KI*DDVLRHLLCLTIWIDRILRSCFYNRHRIRFTIGCTRTRVNQSIYIICCHCLKNCQCV 1040
+I* DVL H +I ++ LR Y RH + F I CT T VN+ + + H L+N V
Sbjct: 555 EI*YDVLCHFFGFSIGVNWQLRCGLYYRHLLWFPISCTGTGVNKCLDSMRSHSLQNQ*GV 376
Query: 1041 RCYVVVVPEWLHCALTNISNSSKVHNSVKCILRKYFLHSFGIA*VSINKLK 1193
C +V+VP+ HC LT+I NS +VH+S+KCI RKY +H F I + I++LK
Sbjct: 375 *CNIVIVPKGFHCTLTHIGNSCEVHHSIKCIFRKYLVHRFLIPKICIDELK 223
Score = 49.6 bits (102), Expect(2) = 4e-075
Identities = 19/23 (82%), Positives = 23/23 (100%)
Frame = -1 / +1
Query: 848 KQSNMAVMILRYFNVIGSDPEGR 780
K+++M+VMILRYFNVIGSDPEGR
Sbjct: 559 KRTDMSVMILRYFNVIGSDPEGR 627
Score = 40.0 bits (81), Expect(2) = 3e-028
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = +1 / -1
Query: 784 PSGSDPITLKYLKIMTAI 837
PSGSDP+TLKYLKIMT I
Sbjct: 623 PSGSDPMTLKYLKIMTDI 570
>gb|BU974311.1|BU974311 HB27I16r BC Hordeum vulgare subsp. vulgare cDNA clone HB27I16
5-PRIME, mRNA sequence
Length = 450
Score = 253 bits (546), Expect(2) = 1e-073
Identities = 105/124 (84%), Positives = 112/124 (90%)
Frame = -1 / +2
Query: 1205 EPGRLQFIYADLGDAKAVKKIFSENAFDAVMHFAAVAYVGESTMEPLRYYHNITSNTLTV 1026
EPGRLQFIYADLGD K+V KIFSENAFDAVMHFAAVAYVGESTMEPLRYYHNITSNTL +
Sbjct: 38 EPGRLQFIYADLGDQKSVNKIFSENAFDAVMHFAAVAYVGESTMEPLRYYHNITSNTLLI 217
Query: 1025 LEAMAAYNVNTLIYSSTCATYGEPDTMPIVETTPQNPINPYGKAKKMAEDIILDFTKSKK 846
LEAMA++ V TLIYSSTCATYGEP+ MPI+ETTPQ PINPYGKAKKMAEDIILDF+K
Sbjct: 218 LEAMASHGVKTLIYSSTCATYGEPEKMPIIETTPQLPINPYGKAKKMAEDIILDFSKRTD 397
Query: 845 QSNM 834
S M
Sbjct: 398 MSVM 409
Score = 177 bits (382), Expect = 8e-044
Identities = 93/130 (71%), Positives = 99/130 (76%)
Frame = +1 / -1
Query: 817 LKIMTAIFDCFFDFVKSKMMSSAIFFALPYGLIGF*GVVSTIGIVSGSP*VAHVLE*IRV 996
LK + + D F KS MMSSAIF A P GLIG *GVVS IGI SGSP*VA VLE*I V
Sbjct: 426 LKYLKIMTDISVLFEKSSMMSSAIFLAFP*GLIGN*GVVSIIGIFSGSP*VAQVLE*ISV 247
Query: 997 FTLYAAIASRTVNVFDVMLW*YLSGSIVLSPT*ATAAKCITASNAFSENIFFTALASPKS 1176
T AIAS+ VFDV+L *YL GSIVLSPT*ATAAKCITASNAFSENI FT SP+S
Sbjct: 246 LTP*EAIASKISKVFDVIL**YLRGSIVLSPT*ATAAKCITASNAFSENILFTDF*SPRS 67
Query: 1177 A*IN*SLPGS 1206
A*+N*SLPGS
Sbjct: 66 A*MN*SLPGS 37
Score = 105 bits (224), Expect(2) = 4e-028
Identities = 48/111 (43%), Positives = 69/111 (62%)
Frame = +3 / -3
Query: 861 KI*DDVLRHLLCLTIWIDRILRSCFYNRHRIRFTIGCTRTRVNQSIYIICCHCLKNCQCV 1040
+I* DVL H +I ++ LR Y RH + F I CT T VN+ + + H L+N V
Sbjct: 382 EI*YDVLCHFFGFSIGVNWQLRCGLYYRHLLWFPISCTGTGVNKCLDSMRSHSLQNQ*GV 203
Query: 1041 RCYVVVVPEWLHCALTNISNSSKVHNSVKCILRKYFLHSFGIA*VSINKLK 1193
C +V++P+ HC LT+I NS +VH+S+KCI RKY +H F I + I++LK
Sbjct: 202 *CNIVIIPKGFHCTLTHIGNSCEVHHSIKCIFRKYLVHRFLIPKICIDELK 50
Score = 44.6 bits (91), Expect(2) = 1e-073
Identities = 17/21 (80%), Positives = 21/21 (100%)
Frame = -1 / +2
Query: 848 KQSNMAVMILRYFNVIGSDPE 786
K+++M+VMILRYFNVIGSDPE
Sbjct: 386 KRTDMSVMILRYFNVIGSDPE 448
Score = 40.0 bits (81), Expect(2) = 4e-028
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = +1 / -1
Query: 784 PSGSDPITLKYLKIMTAI 837
PSGSDP+TLKYLKIMT I
Sbjct: 450 PSGSDPMTLKYLKIMTDI 397
>gb|BQ759817.1|BQ759817 EBpi05_SQ004_A17_R pistil, 8 DPA, no treatment, cv Optic, EBpi05
Hordeum vulgare subsp. vulgare cDNA clone
EBpi05_SQ004_A17 5', mRNA sequence
Length = 430
Score = 214 bits (462), Expect(2) = 3e-073
Identities = 89/102 (87%), Positives = 93/102 (91%)
Frame = -1 / +1
Query: 848 KQSNMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAALGIIPGLKVRGTDY 669
K+SNMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAA GIIPGLKVRGTDY
Sbjct: 103 KKSNMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAASGIIPGLKVRGTDY 282
Query: 668 STADGTCVRDYIDVTDLVDAHVKALGKAQPGKVGIYNVGTGQ 543
TADGTCVRDYIDVTDLVDAHVKALGKA+P K+G G+
Sbjct: 283 PTADGTCVRDYIDVTDLVDAHVKALGKAEPTKLGSITSARGK 408
Score = 174 bits (375), Expect(3) = 8e-060
Identities = 79/94 (84%), Positives = 82/94 (87%)
Frame = +1 / -3
Query: 568 PTLPG*ALPRAFT*ASTRSVTSM*SLTQVPSAVE*SVPRTFSPGMIPKAASKQAPDIRPC 747
P G ALPRA T*ASTRSVTSM*SLT VPSAV *SVPRTFSPGMIP AASK AP+I PC
Sbjct: 383 PNFVGSALPRALT*ASTRSVTSM*SLTHVPSAVG*SVPRTFSPGMIPDAASKHAPEILPC 204
Query: 748 SRSSGLGASPSRPSGSDPITLKYLKIMTAIFDCF 849
SRSSGLGASP RPSGSDPITLKYLKI+TA+FD F
Sbjct: 203 SRSSGLGASPRRPSGSDPITLKYLKIITAMFDFF 102
Score = 111 bits (236), Expect(2) = 6e-030
Identities = 54/91 (59%), Positives = 60/91 (65%)
Frame = +3 / -2
Query: 567 SNFAWLSFTKSFYVSIYKICDIDVVSNASSICSGVIGSTNL*PWNDSQSCIKASTGYPSM 746
S LSFTKSF +SI KI DI VV A SI S V+ S+NL*PWNDS C+K T PSM
Sbjct: 384 SQLCRLSFTKSFDMSINKISDIYVVPYACSISSRVVRSSNL*PWNDS*CCVKTRTRNPSM 205
Query: 747 LA*LWPWSFS*PSLWV*SNHVEVS*DHDSHI 839
L PWSF SL V NH+EVS*DH SH+
Sbjct: 204 LTQFRPWSFPKASLRVRPNHIEVS*DHHSHV 112
Score = 82.2 bits (173), Expect(2) = 3e-073
Identities = 33/42 (78%), Positives = 36/42 (85%)
Frame = -1 / +1
Query: 959 EPDTMPIVETTPQNPINPYGKAKKMAEDIILDFTKSKKQSNM 834
EPDTMPIVETTPQ PINPYGKAKKM+EDIILDF+K + M
Sbjct: 1 EPDTMPIVETTPQIPINPYGKAKKMSEDIILDFSKKSNMAVM 126
Score = 70.7 bits (148), Expect(2) = 2e-024
Identities = 34/47 (72%), Positives = 36/47 (76%)
Frame = +1 / -3
Query: 817 LKIMTAIFDCFFDFVKSKMMSSAIFFALPYGLIGF*GVVSTIGIVSG 957
LK + I F F KS+MMSS IFFALPYGLIG *GVVSTIGIVSG
Sbjct: 143 LKYLKIITAMFDFFEKSRMMSSDIFFALPYGLIGI*GVVSTIGIVSG 3
Score = 62.5 bits (130), Expect(2) = 2e-024
Identities = 31/53 (58%), Positives = 35/53 (66%)
Frame = +2 / -1
Query: 581 AELYQELLREHLQDL*HRCSL*RKFHLQWSNRFHEPLALE*FPKLHQSKHRIS 739
A+LYQEL EH QD *H CS R FH Q + F EPLALE*F L Q+ H+ S
Sbjct: 370 AQLYQEL*HEHQQDQ*HLCSPLRMFHQQ*GSPFLEPLALE*FLMLRQNTHQKS 212
Score = 59.7 bits (124), Expect(3) = 2e-026
Identities = 27/54 (50%), Positives = 31/54 (57%)
Frame = -3 / +3
Query: 843 IKYGCHDLKILQRDWIRPRGXXXXXXXXXXXXAWTDIRCLL*CSFGNHSRAKGS 682
I++GC DLKILQ DW+ P G AW D C+ * S NHSRAKGS
Sbjct: 108 IEHGCDDLKILQCDWVGP*GTPWGSSKA*TA*AWKDFWCVF*RSIRNHSRAKGS 269
Score = 57.0 bits (118), Expect(3) = 2e-026
Identities = 22/34 (64%), Positives = 28/34 (82%)
Frame = -3 / +3
Query: 957 T*YDAYCRNNSSESYQSIW*GKEDGGGHHLRFYK 856
T*++AYCRN+SS++YQSIW GK+D GHH F K
Sbjct: 3 T*HNAYCRNDSSDTYQSIWQGKKDVRGHHS*FLK 104
Score = 53.8 bits (111), Expect(3) = 8e-060
Identities = 22/33 (66%), Positives = 25/33 (75%)
Frame = +3 / -2
Query: 861 KI*DDVLRHLLCLTIWIDRILRSCFYNRHRIRF 959
+I +DVL HL CL IWIDR LRS F NRH +RF
Sbjct: 99 EIKNDVLGHLFCLAIWIDRYLRSRFDNRHCVRF 1
Score = 41.8 bits (85), Expect(3) = 8e-060
Identities = 17/19 (89%), Positives = 18/19 (94%)
Frame = +1 / -1
Query: 520 TNSVTDLPWPVPTL*IPTL 576
TNS TDLP+PVPTL*IPTL
Sbjct: 430 TNSFTDLPFPVPTL*IPTL 374
Score = 40.9 bits (83), Expect(3) = 2e-026
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = -1 / +3
Query: 575 KVGIYNVGTGQGRSVTEF 522
KVGIYNVGTG+GRSV EF
Sbjct: 375 KVGIYNVGTGKGRSVKEF 428
Score = 40.5 bits (82), Expect(2) = 6e-030
Identities = 23/37 (62%), Positives = 24/37 (64%)
Frame = +2 / -1
Query: 848 SLIL*NLR*CPPPSSLPYHMD**DSEELFLQ*ASYQV 958
S+ L N *CP S LP HMD** SEE F Q*A QV
Sbjct: 112 SISLRNQE*CPRTSFLPCHMD**VSEESFRQ*ALCQV 2
>gb|BJ466593.1|BJ466593 BJ466593 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags32o13 3', mRNA sequence
Length = 678
Score = 272 bits (589), Expect = 2e-072
Identities = 105/137 (76%), Positives = 123/137 (89%)
Frame = -1 / -2
Query: 731 GACFDAALGIIPGLKVRGTDYSTADGTCVRDYIDVTDLVDAHVKALGKAQPGKVGIYNVG 552
GACFDAALG+I GLKV+G DY TADGTC+RDYIDVTDLVDAHVKAL KA+P KVGIYNVG
Sbjct: 677 GACFDAALGVISGLKVKGIDYPTADGTCIRDYIDVTDLVDAHVKALNKAKPSKVGIYNVG 498
Query: 551 TGQGRSVTEFVEACKKATGASIKVEYLARRPGDYAEVYSDPSKILMDLNWTAQYTDLGQS 372
TG+GRSV EFV+ACK+ATG IK+EYL+RRPGDYAEV+SDP+KI +LNWTAQ+TDL +S
Sbjct: 497 TGRGRSVKEFVDACKQATGVDIKIEYLSRRPGDYAEVFSDPTKINNELNWTAQHTDLKES 318
Query: 371 LAQAWKWQKAHPNGYAS 321
L+ AW+WQK+HP GY +
Sbjct: 317 LSVAWRWQKSHPRGYGA 267
Score = 188 bits (406), Expect = 4e-047
Identities = 94/134 (70%), Positives = 101/134 (75%)
Frame = +1 / +1
Query: 331 PFGCAFCHFHAWARLWPRSVYWAVQLRSMRIFDGSLYTSA*SPGLRARYSTLIEAPVAFL 510
P GC FCH HA RL RSV AVQL S+ I GSL TSA*SPGL RYS L+ PVA L
Sbjct: 277 PRGCDFCHLHATDRLSLRSVC*AVQLSSLLILVGSLNTSA*SPGLLLRYSILMSTPVACL 456
Query: 511 QASTNSVTDLPWPVPTL*IPTLPG*ALPRAFT*ASTRSVTSM*SLTQVPSAVE*SVPRTF 690
QASTNS+T+ P PVPTL*+PTL G AL AFT*ASTRSVTSM*SL QVPSAV *S+P TF
Sbjct: 457 QASTNSLTERPLPVPTL*MPTLLGFALLSAFT*ASTRSVTSM*SLMQVPSAVG*SIPLTF 636
Query: 691 SPGMIPKAASKQAP 732
+P M P AASK AP
Sbjct: 637 NPEMTPSAASKHAP 678
Score = 105 bits (225), Expect = 4e-022
Identities = 56/133 (42%), Positives = 79/133 (59%)
Frame = +3 / +3
Query: 327 ISVRVRLLPFPRLGKALAKIRVLGCPVEVHEDFRRIAVYLGIISRSTGKIFDLDRSSRCL 506
I+ R+RLLP P +A +I +L PVE D R+ Y I+S ++ + D + CL
Sbjct: 273 IAPRMRLLPPPCDRQAFLEIGMLSSPVEFVVDLGRVTEYFSIVSWPPAEVLNFDVNPGCL 452
Query: 507 LASFYKLSH*STLACSDIVDSNFAWLSFTKSFYVSIYKICDIDVVSNASSICSGVIGSTN 686
LA KL + +T + ++IV++NF L + F++SIY ICDI+VVS A SI +I S N
Sbjct: 453 LAGIDKLLNGATSSSANIVNANFTRLCLVECFHMSIY*ICDINVVSYAGSISCRIIYSFN 632
Query: 687 L*PWNDSQSCIKA 725
L NDS CIKA
Sbjct: 633 LQS*NDS*CCIKA 671
>gb|BJ463647.1|BJ463647 BJ463647 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags32o13 5', mRNA sequence
Length = 533
Score = 250 bits (540), Expect(2) = 9e-070
Identities = 104/124 (83%), Positives = 111/124 (89%)
Frame = -1 / +1
Query: 1205 EPGRLQFIYADLGDAKAVKKIFSENAFDAVMHFAAVAYVGESTMEPLRYYHNITSNTLTV 1026
EPGRL FIYADLGD K+V KIFSENAFDAVMHFAAVAYVGESTMEPLRYYHNITSNTL +
Sbjct: 133 EPGRLXFIYADLGDQKSVNKIFSENAFDAVMHFAAVAYVGESTMEPLRYYHNITSNTLLI 312
Query: 1025 LEAMAAYNVNTLIYSSTCATYGEPDTMPIVETTPQNPINPYGKAKKMAEDIILDFTKSKK 846
LEAMA++ V TLIYSSTCATYGEP+ MPI+ETTPQ PINPYGKAKKMAEDIILDF+K
Sbjct: 313 LEAMASHGVKTLIYSSTCATYGEPEKMPIIETTPQLPINPYGKAKKMAEDIILDFSKRTD 492
Query: 845 QSNM 834
S M
Sbjct: 493 MSVM 504
Score = 175 bits (377), Expect = 4e-043
Identities = 92/130 (70%), Positives = 98/130 (75%)
Frame = +1 / -1
Query: 817 LKIMTAIFDCFFDFVKSKMMSSAIFFALPYGLIGF*GVVSTIGIVSGSP*VAHVLE*IRV 996
LK + + D F KS MMSSAIF A P GLIG *GVVS IGI SGSP*VA VLE*I V
Sbjct: 521 LKYLKIMTDISVLFEKSSMMSSAIFLAFP*GLIGN*GVVSIIGIFSGSP*VAQVLE*ISV 342
Query: 997 FTLYAAIASRTVNVFDVMLW*YLSGSIVLSPT*ATAAKCITASNAFSENIFFTALASPKS 1176
T AIAS+ VFDV+L *YL GSIVLSPT*ATAAKCITASNAFSENI FT SP+S
Sbjct: 341 LTP*EAIASKISKVFDVIL**YLRGSIVLSPT*ATAAKCITASNAFSENILFTDF*SPRS 162
Query: 1177 A*IN*SLPGS 1206
A*+N SLPGS
Sbjct: 161 A*MNXSLPGS 132
Score = 105 bits (224), Expect(2) = 3e-025
Identities = 48/111 (43%), Positives = 69/111 (62%)
Frame = +3 / -3
Query: 861 KI*DDVLRHLLCLTIWIDRILRSCFYNRHRIRFTIGCTRTRVNQSIYIICCHCLKNCQCV 1040
+I* DVL H +I ++ LR Y RH + F I CT T VN+ + + H L+N V
Sbjct: 477 EI*YDVLCHFFGFSIGVNWQLRCGLYYRHLLWFPISCTGTGVNKCLDSMRSHSLQNQ*GV 298
Query: 1041 RCYVVVVPEWLHCALTNISNSSKVHNSVKCILRKYFLHSFGIA*VSINKLK 1193
C +V++P+ HC LT+I NS +VH+S+KCI RKY +H F I + I++LK
Sbjct: 297 *CNIVIIPKGFHCTLTHIGNSCEVHHSIKCIFRKYLVHRFLIPKICIDELK 145
Score = 34.5 bits (69), Expect(2) = 9e-070
Identities = 13/17 (76%), Positives = 17/17 (100%)
Frame = -1 / +1
Query: 848 KQSNMAVMILRYFNVIG 798
K+++M+VMILRYFNVIG
Sbjct: 481 KRTDMSVMILRYFNVIG 531
Score = 30.4 bits (60), Expect(2) = 3e-025
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = +1 / -1
Query: 796 DPITLKYLKIMTAI 837
DP+TLKYLKIMT I
Sbjct: 533 DPMTLKYLKIMTDI 492
>gb|BF255654.2|BF255654 HVSMEf0007H02f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEf0007H02f, mRNA sequence
Length = 841
Score = 248 bits (535), Expect(3) = 2e-069
Identities = 102/128 (79%), Positives = 114/128 (89%)
Frame = -1 / +1
Query: 1205 EPGRLQFIYADLGDAKAVKKIFSENAFDAVMHFAAVAYVGESTMEPLRYYHNITSNTLTV 1026
+PGRLQFI+ADLGDAKAV +IF+ENAFDAVMHFAAVAYVGEST+EPLRYYHNIT+NTL V
Sbjct: 277 DPGRLQFIHADLGDAKAVNRIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITANTLVV 456
Query: 1025 LEAMAAYNVNTLIYSSTCATYGEPDTMPIVETTPQNPINPYGKAKKMAEDIILDFTKSKK 846
LEAMA +NV TLIYSSTCATYGEP+ MPI E T Q PINPYGKAKKMAEDIILDF+KSKK
Sbjct: 457 LEAMAMHNVKTLIYSSTCATYGEPEKMPITEETSQFPINPYGKAKKMAEDIILDFSKSKK 636
Query: 845 QSNMAVMI 822
+++
Sbjct: 637 SDMSVMIL 660
Score = 171 bits (369), Expect(2) = 3e-045
Identities = 85/120 (70%), Positives = 92/120 (76%)
Frame = +1 / -3
Query: 847 FFDFVKSKMMSSAIFFALPYGLIGF*GVVSTIGIVSGSP*VAHVLE*IRVFTLYAAIASR 1026
F D KSKM+SSAIF ALPYG +G V S IGI SGSP*VAHVLE*IRV TL A+AS
Sbjct: 635 FLDLEKSKMISSAIFLALPYGFMGNWEVSSVIGIFSGSP*VAHVLE*IRVLTLCIAMASS 456
Query: 1027 TVNVFDVMLW*YLSGSIVLSPT*ATAAKCITASNAFSENIFFTALASPKSA*IN*SLPGS 1206
T VF VML *YL GS VLSPT*ATAAKC+TASNAFS NI TA ASP+SA +N + PGS
Sbjct: 455 TTRVFAVML**YLRGSSVLSPT*ATAAKCMTASNAFSANILLTAFASPRSACMNCNRPGS 276
Score = 30.9 bits (61), Expect(2) = 3e-045
Identities = 12/20 (60%), Positives = 17/20 (85%)
Frame = +1 / -3
Query: 784 PSGSDPITLKYLKIMTAIFD 843
PSGS+ +TLKYL+I+T + D
Sbjct: 695 PSGSELMTLKYLRIITDMSD 636
Score = 30.4 bits (60), Expect(3) = 2e-069
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = -1 / +2
Query: 782 RLGEAPRPELREHGRISG 729
RL E PELREHGR G
Sbjct: 698 RLSEGSPPELREHGRFLG 751
Score = 24.0 bits (46), Expect(3) = 2e-069
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = -1 / +1
Query: 731 GACFDAALGIIPGLK 687
GA DA L IIPGLK
Sbjct: 748 GAWLDA*LRIIPGLK 792
>gb|CA022047.1|CA022047 HZ42A04r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ42A04
5-PRIME, mRNA sequence
Length = 533
Score = 255 bits (551), Expect = 4e-067
Identities = 102/134 (76%), Positives = 116/134 (86%)
Frame = -1 / +1
Query: 719 DAALGIIPGLKVRGTDYSTADGTCVRDYIDVTDLVDAHVKALGKAQPGKVGIYNVGTGQG 540
+AALGIIPGLKV+GTDY T DGTCVRDYIDVTDLVDAHVKAL KA+ GKVGIYNVGTG+G
Sbjct: 7 EAALGIIPGLKVKGTDYETPDGTCVRDYIDVTDLVDAHVKALNKAERGKVGIYNVGTGRG 186
Query: 539 RSVTEFVEACKKATGASIKVEYLARRPGDYAEVYSDPSKILMDLNWTAQYTDLGQSLAQA 360
RSV EFVEACKKATG IKV+Y RRPGDYAEVYS+P++I +LNWTAQ+T+L +SL A
Sbjct: 187 RSVKEFVEACKKATGVDIKVDYFPRRPGDYAEVYSNPARINRELNWTAQHTELQESLRVA 366
Query: 359 WKWQKAHPNGYASA 318
W WQK H +GYA +
Sbjct: 367 WTWQKKHRSGYADS 408
Score = 187 bits (403), Expect = 1e-046
Identities = 91/130 (70%), Positives = 95/130 (73%)
Frame = +1 / -1
Query: 331 PFGCAFCHFHAWARLWPRSVYWAVQLRSMRIFDGSLYTSA*SPGLRARYSTLIEAPVAFL 510
P C FCH HA RL SV WAVQ S I G LYTSA*SPG R + STL+ PVAFL
Sbjct: 395 PLRCFFCHVHATLRLSWSSVCWAVQFSSRLILAGLLYTSA*SPGRRGK*STLMSTPVAFL 216
Query: 511 QASTNSVTDLPWPVPTL*IPTLPG*ALPRAFT*ASTRSVTSM*SLTQVPSAVE*SVPRTF 690
QASTNS TDLP PVPTL +PTLP AL AFT ASTRSVTSM*SLTQVPS V *SVP TF
Sbjct: 215 QASTNSFTDLPLPVPTLYMPTLPLSALLSAFTWASTRSVTSM*SLTQVPSGVS*SVPLTF 36
Query: 691 SPGMIPKAAS 720
PG+IP AAS
Sbjct: 35 KPGIIPSAAS 6
Score = 112 bits (239), Expect = 4e-024
Identities = 57/131 (43%), Positives = 84/131 (64%)
Frame = +3 / -3
Query: 327 ISVRVRLLPFPRLGKALAKIRVLGCPVEVHEDFRRIAVYLGIISRSTGKIFDLDRSSRCL 506
I+ V LLP PR +AL + VLGCPV D +AV+ I++ + ++ DLD S L
Sbjct: 399 IAAPVLLLPCPRDPEALLEFGVLGCPV*FAVDPCGVAVHFRIVTGAAREVVDLDVDSGRL 220
Query: 507 LASFYKLSH*STLACSDIVDSNFAWLSFTKSFYVSIYKICDIDVVSNASSICSGVIGSTN 686
LASF+KL H* T + ++IV +NFA L + F+V IY++ DIDV+S+AS + S V+G+ +
Sbjct: 219 LASFHKLLH*PTSSGANIVYANFASLRLVERFHVGIYQVGDIDVISHASPVGSFVVGTFD 40
Query: 687 L*PWNDSQSCI 719
L W+ S C+
Sbjct: 39 LQTWDYS*CCL 7
>gb|BQ665583.1|BQ665583 HX04E07u HX Hordeum vulgare subsp. vulgare cDNA clone HX04E07
3-PRIME, mRNA sequence
Length = 516
Score = 248 bits (537), Expect = 3e-065
Identities = 99/130 (76%), Positives = 112/130 (86%)
Frame = -1 / -2
Query: 707 GIIPGLKVRGTDYSTADGTCVRDYIDVTDLVDAHVKALGKAQPGKVGIYNVGTGQGRSVT 528
GIIPGLKV+GTDY T DGTCVRDYIDVTDLVDAHVKAL KA+ GKVGIYNVGTG+GRSV
Sbjct: 515 GIIPGLKVKGTDYETPDGTCVRDYIDVTDLVDAHVKALNKAERGKVGIYNVGTGRGRSVK 336
Query: 527 EFVEACKKATGASIKVEYLARRPGDYAEVYSDPSKILMDLNWTAQYTDLGQSLAQAWKWQ 348
EFVEACKKATG IKV+Y RRPGDYAEVYS+P++I +LNWTAQ+T+L +SL AW WQ
Sbjct: 335 EFVEACKKATGVDIKVDYFPRRPGDYAEVYSNPARINRELNWTAQHTELQESLRVAWTWQ 156
Query: 347 KAHPNGYASA 318
K H +GYA +
Sbjct: 155 KKHRSGYADS 126
Score = 182 bits (391), Expect = 5e-045
Identities = 88/126 (69%), Positives = 92/126 (73%)
Frame = +1 / +1
Query: 331 PFGCAFCHFHAWARLWPRSVYWAVQLRSMRIFDGSLYTSA*SPGLRARYSTLIEAPVAFL 510
P C FCH HA RL SV WAVQ S I G LYTSA*SPG R + STL+ PVAFL
Sbjct: 139 PLRCFFCHVHATLRLSWSSVCWAVQFSSRLILAGLLYTSA*SPGRRGK*STLMSTPVAFL 318
Query: 511 QASTNSVTDLPWPVPTL*IPTLPG*ALPRAFT*ASTRSVTSM*SLTQVPSAVE*SVPRTF 690
QASTNS TDLP PVPTL +PTLP AL AFT ASTRSVTSM*SLTQVPS V *SVP TF
Sbjct: 319 QASTNSFTDLPLPVPTLYMPTLPLSALLSAFTWASTRSVTSM*SLTQVPSGVS*SVPLTF 498
Query: 691 SPGMIP 708
PG+IP
Sbjct: 499 KPGIIP 516
Score = 109 bits (233), Expect = 3e-023
Identities = 56/127 (44%), Positives = 82/127 (64%)
Frame = +3 / +3
Query: 327 ISVRVRLLPFPRLGKALAKIRVLGCPVEVHEDFRRIAVYLGIISRSTGKIFDLDRSSRCL 506
I+ V LLP PR +AL + VLGCPV D +AV+ I++ + ++ DLD S L
Sbjct: 135 IAAPVLLLPCPRDPEALLEFGVLGCPV*FAVDPCGVAVHFRIVTGAAREVVDLDVDSGRL 314
Query: 507 LASFYKLSH*STLACSDIVDSNFAWLSFTKSFYVSIYKICDIDVVSNASSICSGVIGSTN 686
LASF+KL H* T + ++IV +NFA L + F+V IY++ DIDV+S+AS + S V+G+ +
Sbjct: 315 LASFHKLLH*PTSSGANIVYANFASLRLVERFHVGIYQVGDIDVISHASPVGSFVVGTFD 494
Query: 687 L*PWNDS 707
L W+ S
Sbjct: 495 LQTWDYS 515
>gb|BM374192.2|BM374192 EBma03_SQ003_O16_R maternal, 8 DPA, no treatment, cv Optic, EBma03
Hordeum vulgare subsp. vulgare cDNA clone
EBma03_SQ003_O16 5', mRNA sequence
Length = 526
Score = 241 bits (521), Expect = 5e-063
Identities = 96/127 (75%), Positives = 108/127 (85%)
Frame = -1 / +2
Query: 698 PGLKVRGTDYSTADGTCVRDYIDVTDLVDAHVKALGKAQPGKVGIYNVGTGQGRSVTEFV 519
PGLKV+GTDY T DGTCVRDYIDVTDLVDAHVKAL KA+ GKVGIYNVGTG+GRSV EFV
Sbjct: 2 PGLKVKGTDYETPDGTCVRDYIDVTDLVDAHVKALNKAERGKVGIYNVGTGRGRSVKEFV 181
Query: 518 EACKKATGASIKVEYLARRPGDYAEVYSDPSKILMDLNWTAQYTDLGQSLAQAWKWQKAH 339
EACKKATG IKV Y RRPGDYAEVYS+P++I +LNWTAQ+T+L +SL AW WQK H
Sbjct: 182 EACKKATGVDIKVHYFPRRPGDYAEVYSNPARINRELNWTAQHTELQESLRVAWTWQKKH 361
Query: 338 PNGYASA 318
+GYA +
Sbjct: 362 RSGYADS 382
Score = 173 bits (372), Expect = 2e-042
Identities = 85/123 (69%), Positives = 88/123 (71%)
Frame = +1 / -2
Query: 331 PFGCAFCHFHAWARLWPRSVYWAVQLRSMRIFDGSLYTSA*SPGLRARYSTLIEAPVAFL 510
P C FCH HA RL SV WAVQ S I G LYTSA*SPG R + TL+ PVAFL
Sbjct: 369 PLRCFFCHVHATLRLSWSSVCWAVQFSSRLILAGLLYTSA*SPGRRGK*WTLMSTPVAFL 190
Query: 511 QASTNSVTDLPWPVPTL*IPTLPG*ALPRAFT*ASTRSVTSM*SLTQVPSAVE*SVPRTF 690
QASTNS TDLP PVPTL +PTLP AL AFT ASTRSVTSM*SLTQVPS V *SVP TF
Sbjct: 189 QASTNSFTDLPLPVPTLYMPTLPLSALLSAFTWASTRSVTSM*SLTQVPSGVS*SVPLTF 10
Query: 691 SPG 699
PG
Sbjct: 9 KPG 1
Score = 108 bits (231), Expect = 5e-023
Identities = 55/124 (44%), Positives = 80/124 (64%)
Frame = +3 / -1
Query: 327 ISVRVRLLPFPRLGKALAKIRVLGCPVEVHEDFRRIAVYLGIISRSTGKIFDLDRSSRCL 506
I+ V LLP PR +AL + VLGCPV D +AV+ I++ + ++ DLD S L
Sbjct: 373 IAAPVLLLPCPRDPEALLEFGVLGCPV*FAVDPCGVAVHFRIVTGAAREVVDLDVDSGRL 194
Query: 507 LASFYKLSH*STLACSDIVDSNFAWLSFTKSFYVSIYKICDIDVVSNASSICSGVIGSTN 686
LASF+KL H* T + ++IV +NFA L + F+V IY++ DIDV+S+AS + S V+G+ +
Sbjct: 193 LASFHKLLH*PTSSGANIVYANFASLRLVERFHVGIYQVGDIDVISHASPVGSFVVGTFD 14
Query: 687 L*PW 698
L W
Sbjct: 13 LQTW 2
>gb|BU975231.1|BU975231 HB30H20r BC Hordeum vulgare subsp. vulgare cDNA clone HB30H20
5-PRIME, mRNA sequence
Length = 479
Score = 231 bits (499), Expect(2) = 2e-060
Identities = 95/119 (79%), Positives = 106/119 (89%)
Frame = -1 / +1
Query: 1178 ADLGDAKAVKKIFSENAFDAVMHFAAVAYVGESTMEPLRYYHNITSNTLTVLEAMAAYNV 999
ADLGDAKAV +IF+ENAFDAVMHFAAVAYVGEST+EPLRYYHNIT+NTL VLEAMA +NV
Sbjct: 13 ADLGDAKAVNRIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITANTLVVLEAMAMHNV 192
Query: 998 NTLIYSSTCATYGEPDTMPIVETTPQNPINPYGKAKKMAEDIILDFTKSKKQSNMAVMI 822
TLIYSSTCATYGEP+ MPI E TPQ PINPYGKAKKMAEDIILDF+KS+K +++
Sbjct: 193 KTLIYSSTCATYGEPEKMPITEETPQFPINPYGKAKKMAEDIILDFSKSRKSDMSVMIL 369
Score = 168 bits (362), Expect(2) = 5e-059
Identities = 82/111 (73%), Positives = 87/111 (78%)
Frame = +1 / -1
Query: 847 FFDFVKSKMMSSAIFFALPYGLIGF*GVVSTIGIVSGSP*VAHVLE*IRVFTLYAAIASR 1026
F D KSKM+SSAIF ALPYG +G GV S IGI SGSP*VAHVLE*IRV TL A+AS
Sbjct: 344 FLDLEKSKMISSAIFLALPYGFMGNWGVSSVIGIFSGSP*VAHVLE*IRVLTLCIAMASS 165
Query: 1027 TVNVFDVMLW*YLSGSIVLSPT*ATAAKCITASNAFSENIFFTALASPKSA 1179
T VF VML *YL GS VLSPT*ATAAKC+TASNAFS NI TA ASP+SA
Sbjct: 164 TTRVFAVML**YLRGSSVLSPT*ATAAKCMTASNAFSANILLTAFASPRSA 12
Score = 102 bits (218), Expect(3) = 2e-034
Identities = 41/46 (89%), Positives = 45/46 (97%)
Frame = -1 / +1
Query: 848 KQSNMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAA 711
++S+M+VMILRYFNVIGSDPEGRLGEAP PELREHGRISGACFDAA
Sbjct: 340 RKSDMSVMILRYFNVIGSDPEGRLGEAPPPELREHGRISGACFDAA 477
Score = 88.1 bits (186), Expect(2) = 1e-023
Identities = 45/104 (43%), Positives = 65/104 (62%)
Frame = +3 / -3
Query: 870 DDVLRHLLCLTIWIDRILRSCFYNRHRIRFTIGCTRTRVNQSIYIICCHCLKNCQCVRCY 1049
+D+L H L L I + L S F +RH + F +G T RV+Q I+ H + Q +
Sbjct: 321 NDILCHFLGLAIRVYGKLGSFFSDRHLLGFPVGGTCARVDQGFNIVHRHGF*HDQSICSD 142
Query: 1050 VVVVPEWLHCALTNISNSSKVHNSVKCILRKYFLHSFGIA*VSI 1181
V++VP+ L AL +ISN SKVH+S+KCI +Y ++SF IA*+SI
Sbjct: 141 VMIVPQRLKRALAHISNGSKVHDSIKCIFCEYSVNSFCIA*ISI 10
Score = 80.3 bits (169), Expect(2) = 5e-059
Identities = 33/44 (75%), Positives = 39/44 (88%)
Frame = +1 / -1
Query: 712 AASKQAPDIRPCSRSSGLGASPSRPSGSDPITLKYLKIMTAIFD 843
AASK APDIRPCSR+SG GASPS PSGS+P+TLKYL+I+T + D
Sbjct: 476 AASKHAPDIRPCSRNSGGGASPSLPSGSEPMTLKYLRIITDMSD 345
Score = 56.5 bits (117), Expect(3) = 2e-034
Identities = 27/79 (34%), Positives = 46/79 (58%)
Frame = -3 / +3
Query: 1083 EHNGATQVLPQHNIEHIDSS*GNGSI*CKYSDLLEYVCNLW*T*YDAYCRNNSSESYQSI 904
EH A++VL H+ ++ + +G C DLL ++C+L T DAY NS S++ +
Sbjct: 108 EHA*ASEVLS*HHCKYSGRARSHGDAQC*NPDLL*HMCHLRGTREDAYH*RNSPVSHKPV 287
Query: 903 W*GKEDGGGHHLRFYKIKE 847
W G+E+G G+H +++E
Sbjct: 288 WQGQENGRGYHFGLLQVQE 344
Score = 42.3 bits (86), Expect(2) = 1e-023
Identities = 19/43 (44%), Positives = 27/43 (62%)
Frame = +3 / -3
Query: 714 CIKASTGYPSMLA*LWPWSFS*PSLWV*SNHVEVS*DHDSHI* 842
C++A Y +MLA WS + S WV ++ VEVS DH+ H+*
Sbjct: 474 CVEACARYTAMLAQFRWWSLTQSSFWVRTDDVEVSQDHN*HV* 346
Score = 25.4 bits (49), Expect(3) = 2e-034
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = -3 / +3
Query: 1179 C*LRRCQSCEENI 1141
C* RRC+SC +NI
Sbjct: 12 C*SRRCKSC*QNI 50
Score = 22.1 bits (42), Expect(2) = 2e-060
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = -2 / +2
Query: 844 NQIWLS*S*DTST*LDQTQRDG*EKLQGQSYASMDGY 734
NQ *S*DTST TQ++ +L + ASM Y
Sbjct: 344 NQTCQL*S*DTSTSSVLTQKEDWVRLHHLNCASMAVY 454
>gb|BF630195.2|BF630195 HVSMEb0008E12f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0008E12f, mRNA sequence
Length = 497
Score = 218 bits (471), Expect = 4e-056
Identities = 87/116 (75%), Positives = 99/116 (85%)
Frame = -1 / +2
Query: 665 TADGTCVRDYIDVTDLVDAHVKALGKAQPGKVGIYNVGTGQGRSVTEFVEACKKATGASI 486
T DGTCVRDYIDVTDLVDAHVKAL KA+ GKVGIYNVGTG+GRSV EFVEACKKATG I
Sbjct: 8 TPDGTCVRDYIDVTDLVDAHVKALNKAERGKVGIYNVGTGRGRSVKEFVEACKKATGVDI 187
Query: 485 KVEYLARRPGDYAEVYSDPSKILMDLNWTAQYTDLGQSLAQAWKWQKAHPNGYASA 318
KV+Y RRPGDYAEVYS+P++I +LNWTAQ+T+L +SL AW WQK H +GYA +
Sbjct: 188 KVDYFPRRPGDYAEVYSNPARINRELNWTAQHTELQESLRVAWTWQKKHRSGYADS 355
Score = 159 bits (341), Expect = 4e-038
Identities = 78/112 (69%), Positives = 81/112 (72%)
Frame = +1 / -3
Query: 331 PFGCAFCHFHAWARLWPRSVYWAVQLRSMRIFDGSLYTSA*SPGLRARYSTLIEAPVAFL 510
P C FCH HA RL SV WAVQ S I G LYTSA*SPG R + STL+ PVAFL
Sbjct: 342 PLRCFFCHVHATLRLSWSSVCWAVQFSSRLILAGLLYTSA*SPGRRGK*STLMSTPVAFL 163
Query: 511 QASTNSVTDLPWPVPTL*IPTLPG*ALPRAFT*ASTRSVTSM*SLTQVPSAV 666
QASTNS TDLP PVPTL +PTLP AL AFT ASTRSVTSM*SLTQVPS V
Sbjct: 162 QASTNSFTDLPLPVPTLYMPTLPLSALLSAFTWASTRSVTSM*SLTQVPSGV 7
>gb|BQ472666.1|BQ472666 HB01N17r BC Hordeum vulgare subsp. vulgare cDNA clone HB01N17
5-PRIME, mRNA sequence
Length = 521
Score = 213 bits (459), Expect = 2e-054
Identities = 86/102 (84%), Positives = 94/102 (92%)
Frame = -1 / +3
Query: 1205 EPGRLQFIYADLGDAKAVKKIFSENAFDAVMHFAAVAYVGESTMEPLRYYHNITSNTLTV 1026
+PGRLQFI+ADLGDAKAV +IF+ENAFDAVMHFAAVAYVGEST+EPLRYYHNIT+NTL V
Sbjct: 216 DPGRLQFIHADLGDAKAVNRIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITANTLVV 395
Query: 1025 LEAMAAYNVNTLIYSSTCATYGEPDTMPIVETTPQNPINPYG 900
LEAMA +NV TLIYSSTCATYGEP+ MPI E TPQ PINPYG
Sbjct: 396 LEAMAMHNVKTLIYSSTCATYGEPEKMPITEETPQFPINPYG 521
Score = 148 bits (317), Expect = 7e-035
Identities = 73/102 (71%), Positives = 79/102 (77%)
Frame = +1 / -2
Query: 901 PYGLIGF*GVVSTIGIVSGSP*VAHVLE*IRVFTLYAAIASRTVNVFDVMLW*YLSGSIV 1080
PYG +G GV S IGI SGSP*VAHVLE*IRV TL A+AS T VF VML *YL GS V
Sbjct: 520 PYGFMGNWGVSSVIGIFSGSP*VAHVLE*IRVLTLCIAMASSTTRVFAVML**YLRGSSV 341
Query: 1081 LSPT*ATAAKCITASNAFSENIFFTALASPKSA*IN*SLPGS 1206
LSPT*ATAAKC+TASNAFS NI TA ASP+SA +N + PGS
Sbjct: 340 LSPT*ATAAKCMTASNAFSANILLTAFASPRSACMNCNRPGS 215
>gb|BQ759821.1|BQ759821 EBpi05_SQ004_B15 _R pistil, 8 DPA, no treatment, cv Optic, EBpi05
Hordeum vulgare subsp. vulgare cDNA clone
EBpi05_SQ004_B15 5', mRNA sequence
Length = 315
Score = 188 bits (404), Expect(2) = 2e-052
Identities = 76/81 (93%), Positives = 77/81 (95%)
Frame = -1 / +2
Query: 800 GSDPEGRLGEAPRPELREHGRISGACFDAALGIIPGLKVRGTDYSTADGTCVRDYIDVTD 621
G DPEGRLGEAPRPELREHGRISGACFDAA GIIPGLKVRGTDY TADGTCVRDYIDVTD
Sbjct: 71 GRDPEGRLGEAPRPELREHGRISGACFDAASGIIPGLKVRGTDYPTADGTCVRDYIDVTD 250
Query: 620 LVDAHVKALGKAQPGKVGIYN 558
LVDAHVKALGKA+P KVGIYN
Sbjct: 251 LVDAHVKALGKAEPNKVGIYN 313
Score = 151 bits (324), Expect(2) = 1e-041
Identities = 71/82 (86%), Positives = 72/82 (87%)
Frame = +1 / -1
Query: 556 TL*IPTLPG*ALPRAFT*ASTRSVTSM*SLTQVPSAVE*SVPRTFSPGMIPKAASKQAPD 735
TL*IPTL G ALPRA T*ASTRSVTSM*SLT VPSAV *SVPRTFSPGMIP AASK AP+
Sbjct: 315 TL*IPTLLGSALPRALT*ASTRSVTSM*SLTHVPSAVG*SVPRTFSPGMIPDAASKHAPE 136
Query: 736 IRPCSRSSGLGASPSRPSGSDP 801
I PCSRSSGLGASP RPSGS P
Sbjct: 135 ILPCSRSSGLGASPRRPSGSRP 70
Score = 97.3 bits (206), Expect(2) = 3e-021
Identities = 45/73 (61%), Positives = 51/73 (69%)
Frame = +3 / -3
Query: 558 IVDSNFAWLSFTKSFYVSIYKICDIDVVSNASSICSGVIGSTNL*PWNDSQSCIKASTGY 737
++D NF LSFTKSF +SI KI DI VV A SI S V+ S+NL*PWNDS C+KA T
Sbjct: 313 VIDPNFVRLSFTKSFDMSINKISDIYVVPYACSISSRVVRSSNL*PWNDS*CCVKARTRN 134
Query: 738 PSMLA*LWPWSFS 776
PSML PWSFS
Sbjct: 133 PSMLTQFRPWSFS 95
Score = 39.6 bits (80), Expect(2) = 1e-041
Identities = 15/20 (75%), Positives = 18/20 (90%)
Frame = +1 / -2
Query: 790 GSDPITLKYLKIMTAIFDCF 849
G DPITLKY+KI+TA+FD F
Sbjct: 80 GLDPITLKYIKIITAMFDFF 21
Score = 38.6 bits (78), Expect(2) = 2e-052
Identities = 16/20 (80%), Positives = 18/20 (90%)
Frame = -1 / +1
Query: 848 KQSNMAVMILRYFNVIGSDP 789
K+SNMAVMIL YFNV+GS P
Sbjct: 22 KKSNMAVMILIYFNVMGSRP 81
Score = 24.9 bits (48), Expect(2) = 3e-021
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +3 / -1
Query: 801 NHVEVS*DHDSHI 839
+H+EV *DH SH+
Sbjct: 69 HHIEVY*DHHSHV 31
>gb|CA006313.1|CA006313 HU14I15u HU Hordeum vulgare subsp. vulgare cDNA clone HU14I15
3-PRIME, mRNA sequence
Length = 550
Score = 195 bits (421), Expect = 3e-049
Identities = 75/101 (74%), Positives = 90/101 (89%)
Frame = -1 / -1
Query: 623 DLVDAHVKALGKAQPGKVGIYNVGTGQGRSVTEFVEACKKATGASIKVEYLARRPGDYAE 444
DLVDAHVKAL KA+P KVGIYNVGTG+GRSV EFV+ACK+ATG IK+EYL+RRPGDYAE
Sbjct: 550 DLVDAHVKALNKAKPSKVGIYNVGTGRGRSVKEFVDACKQATGVDIKIEYLSRRPGDYAE 371
Query: 443 VYSDPSKILMDLNWTAQYTDLGQSLAQAWKWQKAHPNGYAS 321
V+SDP+KI +LNWTAQ+TDL +SL+ AW+WQK+HP GY +
Sbjct: 370 VFSDPTKINNELNWTAQHTDLKESLSVAWRWQKSHPRGYGA 248
Score = 131 bits (281), Expect = 7e-030
Identities = 66/97 (68%), Positives = 71/97 (73%)
Frame = +1 / +3
Query: 331 PFGCAFCHFHAWARLWPRSVYWAVQLRSMRIFDGSLYTSA*SPGLRARYSTLIEAPVAFL 510
P GC FCH HA RL RSV AVQL S+ I GSL TSA*SPGL RYS L+ PVA L
Sbjct: 258 PRGCDFCHLHATDRLSLRSVC*AVQLSSLLILVGSLNTSA*SPGLLLRYSILMSTPVACL 437
Query: 511 QASTNSVTDLPWPVPTL*IPTLPG*ALPRAFT*ASTR 621
QASTNS+T+ P PVPTL*+PTL G AL AFT*ASTR
Sbjct: 438 QASTNSLTERPLPVPTL*MPTLLGFALLSAFT*ASTR 548
>gb|BG367217.1|BG367217 HVSMEi0011F11f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0011F11f, mRNA sequence
Length = 873
Score = 186 bits (400), Expect = 3e-046
Identities = 78/112 (69%), Positives = 89/112 (79%)
Frame = -1 / +2
Query: 665 TADGTCVRDYIDVTDLVDAHVKALGKAQPGKVGIYNVGTGQGRSVTEFVEACKKATGASI 486
T DGTCVRDYIDVTDLVDAHVKAL KA+ GKVGIYNVGTG+GRSV EFVEACKKATG +I
Sbjct: 8 TPDGTCVRDYIDVTDLVDAHVKALNKAERGKVGIYNVGTGRGRSVKEFVEACKKATGVNI 187
Query: 485 KVEYLARRPGDYAEVYSDPSKILMDLNWTAQYTDLGQSLAQAWKWQKAHPNG 330
KV+Y RRPGDYAEV SDP ++ +L+WT ++TDL SL +K H G
Sbjct: 188 KVDYFPRRPGDYAEVCSDPRRMNRELDWTGRFTDLFGSLVV*LHVRKKHQGG 343
Score = 139 bits (299), Expect = 2e-032
Identities = 75/114 (65%), Positives = 80/114 (70%)
Frame = +1 / -1
Query: 325 AYPFGCAFCHFHAWARLWPRSVYWAVQLRSMRIFDGSLYTSA*SPGLRARYSTLIEAPVA 504
AYP C F + RL RSV VQ S I GSL+TSA*SPG R + STL+ PVA
Sbjct: 348 AYPPWCFFLTCNYTTRLPKRSVNRPVQSSSRFILRGSLHTSA*SPGRRGK*STLMLTPVA 169
Query: 505 FLQASTNSVTDLPWPVPTL*IPTLPG*ALPRAFT*ASTRSVTSM*SLTQVPSAV 666
FLQASTNS TDLP PVPTL +PTLP AL AFT ASTRSVTSM*SLTQVPS V
Sbjct: 168 FLQASTNSFTDLPLPVPTLYMPTLPLSALLSAFTWASTRSVTSM*SLTQVPSGV 7
>gb|BU973855.1|BU973855 HB26C19r BC Hordeum vulgare subsp. vulgare cDNA clone HB26C19
5-PRIME, mRNA sequence
Length = 554
Score = 177 bits (381), Expect = 1e-043
Identities = 73/82 (89%), Positives = 77/82 (93%)
Frame = -1 / +2
Query: 1205 EPGRLQFIYADLGDAKAVKKIFSENAFDAVMHFAAVAYVGESTMEPLRYYHNITSNTLTV 1026
EPGRLQFIYADLGD K+V KIFSENAFDAVMHFAAVAYVGESTMEPLRYYHNITSNTL +
Sbjct: 308 EPGRLQFIYADLGDQKSVNKIFSENAFDAVMHFAAVAYVGESTMEPLRYYHNITSNTLLI 487
Query: 1025 LEAMAAYNVNTLIYSSTCATYG 960
LEAMA++ V TLIYSSTCATYG
Sbjct: 488 LEAMASHGVKTLIYSSTCATYG 553
Score = 123 bits (263), Expect = 2e-027
Identities = 63/82 (76%), Positives = 67/82 (81%)
Frame = +1 / -3
Query: 961 P*VAHVLE*IRVFTLYAAIASRTVNVFDVMLW*YLSGSIVLSPT*ATAAKCITASNAFSE 1140
P*VA VLE*I V T AIAS+ VFDV+L *YL GSIVLSPT*ATAAKCITASNAFSE
Sbjct: 552 P*VAQVLE*ISVLTP*EAIASKISKVFDVIL**YLRGSIVLSPT*ATAAKCITASNAFSE 373
Query: 1141 NIFFTALASPKSA*IN*SLPGS 1206
NI FT SP+SA*+N*SLPGS
Sbjct: 372 NILFTDF*SPRSA*MN*SLPGS 307
>gb|CA027499.1|CA027499 HZ59C02r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ59C02
5-PRIME, mRNA sequence
Length = 405
Score = 160 bits (344), Expect = 1e-038
Identities = 66/77 (85%), Positives = 73/77 (94%)
Frame = -1 / +2
Query: 1205 EPGRLQFIYADLGDAKAVKKIFSENAFDAVMHFAAVAYVGESTMEPLRYYHNITSNTLTV 1026
+PGRLQFI+ADLGDAKAV +IF+ENAFDAVMHFAAVAYVGEST+EPLRYYHNIT+NTL V
Sbjct: 173 DPGRLQFIHADLGDAKAVNRIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITANTLVV 352
Query: 1025 LEAMAAYNVNTLIYSST 975
LEAMA +NV TLIYSST
Sbjct: 353 LEAMAMHNVKTLIYSST 403
Score = 113 bits (242), Expect = 2e-024
Identities = 56/78 (71%), Positives = 61/78 (78%)
Frame = +1 / -1
Query: 973 HVLE*IRVFTLYAAIASRTVNVFDVMLW*YLSGSIVLSPT*ATAAKCITASNAFSENIFF 1152
HVLE*IRV TL A+AS T VF VML *YL GS VLSPT*ATAAKC+TASNAFS NI
Sbjct: 405 HVLE*IRVLTLCIAMASSTTRVFAVML**YLRGSSVLSPT*ATAAKCMTASNAFSANILL 226
Query: 1153 TALASPKSA*IN*SLPGS 1206
TA ASP+SA +N + PGS
Sbjct: 225 TAFASPRSACMNCNRPGS 172
>gb|BU996676.1|BU996676 HM14G05r HM Hordeum vulgare subsp. vulgare cDNA clone HM14G05
5-PRIME, mRNA sequence
Length = 536
Score = 153 bits (329), Expect = 2e-036
Identities = 57/80 (71%), Positives = 71/80 (88%)
Frame = -1 / +1
Query: 560 NVGTGQGRSVTEFVEACKKATGASIKVEYLARRPGDYAEVYSDPSKILMDLNWTAQYTDL 381
NVGTG+GRSV EFV+ACK+ATG IK+EYL+RRPGDYAEV+SDP+KI +LNWTAQ+TDL
Sbjct: 13 NVGTGRGRSVKEFVDACKQATGVDIKIEYLSRRPGDYAEVFSDPTKINNELNWTAQHTDL 192
Query: 380 GQSLAQAWKWQKAHPNGYAS 321
+SL+ AW+WQK+HP GY +
Sbjct: 193 KESLSVAWRWQKSHPRGYGA 252
Score = 106 bits (226), Expect = 3e-022
Identities = 51/77 (66%), Positives = 55/77 (71%)
Frame = +1 / -1
Query: 331 PFGCAFCHFHAWARLWPRSVYWAVQLRSMRIFDGSLYTSA*SPGLRARYSTLIEAPVAFL 510
P GC FCH HA RL RSV AVQL S+ I GSL TSA*SPGL RYS L+ PVA L
Sbjct: 242 PRGCDFCHLHATDRLSLRSVC*AVQLSSLLILVGSLNTSA*SPGLLLRYSILMSTPVACL 63
Query: 511 QASTNSVTDLPWPVPTL 561
QASTNS+T+ P PVPTL
Sbjct: 62 QASTNSLTERPLPVPTL 12
>gb|BU975384.1|BU975384 HB31F04r BC Hordeum vulgare subsp. vulgare cDNA clone HB31F04
5-PRIME, mRNA sequence
Length = 501
Score = 82.2 bits (173), Expect(3) = 2e-032
Identities = 34/80 (42%), Positives = 47/80 (58%)
Frame = -1 / +1
Query: 1091 VGESTMEPLRYYHNITSNTLTVLEAMAAYNVNTLIYSSTCATYGEPDTMPIVETTPQNPI 912
VGES +PL YY N T+T+L+ MAA+ L++SS+ YG P +P E P +
Sbjct: 13 VGESVEKPLLYYDNNLIGTITLLQVMAAHGCKKLVFSSSATVYGWPKEVPCTEEFPLSAT 192
Query: 911 NPYGKAKKMAEDIILDFTKS 852
NPYG+ K + EDI D +S
Sbjct: 193 NPYGRTKLVIEDICRDLQRS 252
Score = 60.6 bits (126), Expect(3) = 2e-032
Identities = 26/42 (61%), Positives = 29/42 (69%)
Frame = -1 / +1
Query: 713 ALGIIPGLKVRGTDYSTADGTCVRDYIDVTDLVDAHVKALGK 588
A+G P L V GTDY+T DGT VRDYI V DL D H+ AL K
Sbjct: 376 AVGRRPALTVYGTDYNTKDGTGVRDYIHVVDLADGHIAALRK 501
Score = 35.0 bits (70), Expect(3) = 2e-032
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = -1 / +1
Query: 830 VMILRYFNVIGSDPEGRLGEAP 765
+++LRYFN +G+ P G +GE P
Sbjct: 268 IILLRYFNPVGAHPSGYIGEDP 333
>gb|BU971800.1|BU971800 HB19L11r BC Hordeum vulgare subsp. vulgare cDNA clone HB19L11
5-PRIME, mRNA sequence
Length = 569
Score = 60.6 bits (126), Expect(4) = 6e-032
Identities = 26/42 (61%), Positives = 29/42 (69%)
Frame = -1 / +1
Query: 713 ALGIIPGLKVRGTDYSTADGTCVRDYIDVTDLVDAHVKALGK 588
A+G P L V GTDY+T DGT VRDYI V DL D H+ AL K
Sbjct: 313 AVGRRPALTVYGTDYNTKDGTGVRDYIHVVDLADGHIAALRK 438
Score = 58.3 bits (121), Expect(4) = 6e-032
Identities = 23/59 (38%), Positives = 34/59 (57%)
Frame = -1 / +1
Query: 1028 VLEAMAAYNVNTLIYSSTCATYGEPDTMPIVETTPQNPINPYGKAKKMAEDIILDFTKS 852
+L+ MAA+ L++SS+ YG P +P E P + NPYG+ K + EDI D +S
Sbjct: 13 LLQVMAAHGCKKLVFSSSATVYGWPKEVPCTEEFPLSATNPYGRTKLVIEDICRDLQRS 189
Score = 39.6 bits (80), Expect(4) = 6e-032
Identities = 16/31 (51%), Positives = 21/31 (67%)
Frame = -1 / +1
Query: 566 IYNVGTGQGRSVTEFVEACKKATGASIKVEY 474
+YN+GTG+G SV E V A +KA G I + Y
Sbjct: 472 VYNLGTGKGTSVLEMVAAFEKACGKKIPLVY 564
Score = 35.0 bits (70), Expect(4) = 6e-032
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = -1 / +1
Query: 830 VMILRYFNVIGSDPEGRLGEAP 765
+++LRYFN +G+ P G +GE P
Sbjct: 205 IILLRYFNPVGAHPSGYIGEDP 270
>gb|AL503638.1|AL503638 AL503638 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW02O11T 5', mRNA sequence
Length = 189
Score = 136 bits (292), Expect = 2e-031
Identities = 56/61 (91%), Positives = 57/61 (93%)
Frame = -1 / +2
Query: 1097 AYVGESTMEPLRYYHNITSNTLTVLEAMAAYNVNTLIYSSTCATYGEPDTMPIVETTPQN 918
AYVGEST EPLRYYHNITSNTLTVLEAMAA+NV TLIYSSTCATYGEPDTMPIVETTP
Sbjct: 5 AYVGESTQEPLRYYHNITSNTLTVLEAMAAHNVKTLIYSSTCATYGEPDTMPIVETTPHI 184
Query: 917 P 915
P
Sbjct: 185 P 187
Score = 116 bits (249), Expect = 2e-025
Identities = 45/61 (73%), Positives = 50/61 (81%)
Frame = +3 / -3
Query: 915 RILRSCFYNRHRIRFTIGCTRTRVNQSIYIICCHCLKNCQCVRCYVVVVPEWLHCALTNI 1094
R +RSCF NRH +RF I CT TRVNQS YI+CCHCLK+CQ + CYVVVVP WL CALTNI
Sbjct: 187 RYVRSCFDNRHCVRFXICCTSTRVNQSFYIMCCHCLKHCQRI*CYVVVVP*WLLCALTNI 8
Query: 1095 S 1097
S
Sbjct: 7 S 5
Score = 116 bits (248), Expect = 2e-025
Identities = 44/59 (74%), Positives = 54/59 (91%)
Frame = -3 / +1
Query: 1089 W*EHNGATQVLPQHNIEHIDSS*GNGSI*CKYSDLLEYVCNLW*T*YDAYCRNNSSESY 913
W*EH GAT+VLPQHNI+++DS+*GNGS *CK SDLLEY+CN+W T*++AYCRNNSS +Y
Sbjct: 13 W*EHTGATKVLPQHNIKYVDSA*GNGST*CKNSDLLEYLCNIWXT*HNAYCRNNSSHTY 189
Score = 115 bits (245), Expect = 6e-025
Identities = 56/62 (90%), Positives = 56/62 (90%)
Frame = +1 / -1
Query: 913 IGF*GVVSTIGIVSGSP*VAHVLE*IRVFTLYAAIASRTVNVFDVMLW*YLSGSIVLSPT 1092
IG *GVVSTIGIVSGSP VA VLE*IRVFTL AAIAS TVNVFDVMLW*YLSGS VLSPT
Sbjct: 189 IGM*GVVSTIGIVSGSPYVAQVLE*IRVFTLCAAIASSTVNVFDVMLW*YLSGSCVLSPT 10
Query: 1093 *A 1098
*A
Sbjct: 9 *A 4
>gb|BE420919.1|BE420919 HWM003.H08 ITEC HWM Barley Leaf Library Hordeum vulgare subsp.
vulgare cDNA clone HWM003.H08, mRNA sequence
Length = 1212
Score = 62.5 bits (130), Expect(4) = 2e-029
Identities = 26/59 (44%), Positives = 36/59 (61%)
Frame = -1 / +2
Query: 566 IYNVGTGQGRSVTEFVEACKKATGASIKVEYLARRPGDYAEVYSDPSKILMDLNWTAQY 390
+YN+GTG+G SV E V A +KA G I + Y RR GD VY+ +K +L W A++
Sbjct: 416 VYNLGTGKGTSVLEMVAAFEKACGKKIPLVYAGRRAGDAETVYAATAKAEKELKWKAKF 592
Score = 57.4 bits (119), Expect(4) = 2e-029
Identities = 25/42 (59%), Positives = 28/42 (66%)
Frame = -1 / +2
Query: 713 ALGIIPGLKVRGTDYSTADGTCVRDYIDVTDLVDAHVKALGK 588
A+G P L V GT Y+T DGT VRDYI V DL D H+ AL K
Sbjct: 257 AVGRRPALTVYGTHYNTKDGTGVRDYIHVVDLADGHIAALRK 382
Score = 35.0 bits (70), Expect(4) = 2e-029
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = -1 / +1
Query: 830 VMILRYFNVIGSDPEGRLGEAP 765
+++LRYFN +G+ P G +GE P
Sbjct: 148 IILLRYFNPVGAHPSGYIGEDP 213
Score = 30.4 bits (60), Expect(4) = 2e-029
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -1 / +1
Query: 935 ETTPQNPINPYGKAKKMAEDIILDFTKS 852
E P + NPYG+ K + EDI D +S
Sbjct: 49 EELPLSGTNPYGRTKLVIEDICRDLQRS 132
>gb|BM816328.1|BM816328 HC108D12_SK.ab1 HC Hordeum vulgare subsp. vulgare cDNA clone
HC108D12_SK.ab1 similar to UDP-glucose 4-epimerase,Aldose
1-epimerase,, mRNA sequence
Length = 860
Score = 114 bits (243), Expect(2) = 3e-029
Identities = 49/114 (42%), Positives = 68/114 (59%)
Frame = -1 / +3
Query: 1193 LQFIYADLGDAKAVKKIFSENAFDAVMHFAAVAYVGESTMEPLRYYHNITSNTLTVLEAM 1014
L+F DL D A++ IFS F+AV+HFA + VGES +PL YY N T+T+L+ M
Sbjct: 351 LEFRKVDLRDKAALEDIFSSQRFEAVIHFAGLKAVGESVEKPLLYYDNNLIGTITLLQVM 530
Query: 1013 AAYNVNTLIYSSTCATYGEPDTMPIVETTPQNPINPYGKAKKMAEDIILDFTKS 852
AA+ L++SS+ YG P +P E P + NPYG+ K + EDI D +S
Sbjct: 531 AAHGCKKLVFSSSATVYGWPKEVPCTEEFPLSATNPYGRTKLVIEDICRDLQRS 692
Score = 35.0 bits (70), Expect(2) = 3e-029
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = -1 / +3
Query: 830 VMILRYFNVIGSDPEGRLGEAP 765
+++LRYFN +G+ P G +GE P
Sbjct: 708 IILLRYFNPVGAHPSGYIGEDP 773
>gb|CA015170.1|CA015170 HT13H22r HT Hordeum vulgare subsp. vulgare cDNA clone HT13H22
5-PRIME, mRNA sequence
Length = 640
Score = 114 bits (243), Expect(2) = 4e-027
Identities = 49/114 (42%), Positives = 68/114 (59%)
Frame = -1 / +3
Query: 1193 LQFIYADLGDAKAVKKIFSENAFDAVMHFAAVAYVGESTMEPLRYYHNITSNTLTVLEAM 1014
L+F DL D A++ IFS F+AV+HFA + VGES +PL YY N T+T+L+ M
Sbjct: 231 LEFRKVDLRDKAALEDIFSSQRFEAVIHFAGLKAVGESVEKPLLYYDNNLIGTITLLQVM 410
Query: 1013 AAYNVNTLIYSSTCATYGEPDTMPIVETTPQNPINPYGKAKKMAEDIILDFTKS 852
AA+ L++SS+ YG P +P E P + NPYG+ K + EDI D +S
Sbjct: 411 AAHGCKKLVFSSSATVYGWPKEVPCTEEFPLSATNPYGRTKLVIEDICRDLQRS 572
Score = 27.6 bits (54), Expect(2) = 4e-027
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = -1 / +3
Query: 830 VMILRYFNVIGSDPEG 783
+++LRYFN +G+ P G
Sbjct: 588 IILLRYFNPVGAHPSG 635
>gb|BE558753.3|BE558753 HV_CEb0020E08f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0020E08f, mRNA sequence
Length = 790
Score = 61.1 bits (127), Expect(4) = 1e-026
Identities = 26/58 (44%), Positives = 36/58 (62%)
Frame = -1 / +1
Query: 563 YNVGTGQGRSVTEFVEACKKATGASIKVEYLARRPGDYAEVYSDPSKILMDLNWTAQY 390
YN+GTG+G SV E V A +KA+G I + RRPGD +++ K +LNW A+Y
Sbjct: 304 YNLGTGKGTSVLEIVNAFEKASGKKIPLVVGQRRPGDAEILFAGTGKAERELNWKAKY 477
Score = 51.5 bits (106), Expect(4) = 1e-026
Identities = 21/42 (50%), Positives = 28/42 (66%)
Frame = -1 / +1
Query: 713 ALGIIPGLKVRGTDYSTADGTCVRDYIDVTDLVDAHVKALGK 588
A+G P + + G +Y+T DGT VRDYI V DL + H+ AL K
Sbjct: 142 AVGRRPSVTIFGNNYATKDGTGVRDYIHVLDLAEGHIAALRK 267
Score = 40.0 bits (81), Expect(4) = 1e-026
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = -1 / +1
Query: 851 KKQSNMAVMILRYFNVIGSDPEGRLGEAPR 762
+ S +++LRYFN +G+ P G LGE PR
Sbjct: 13 RSDSEWRIILLRYFNPVGAHPSGYLGEDPR 102
Score = 22.6 bits (43), Expect(4) = 1e-026
Identities = 6/13 (46%), Positives = 7/13 (53%)
Frame = -1 / +1
Query: 359 WKWQKAHPNGYAS 321
W W +P GY S
Sbjct: 505 WNWASKNPYGYGS 543
>gb|CA013080.1|CA013080 HT07F09r HT Hordeum vulgare subsp. vulgare cDNA clone HT07F09
5-PRIME, mRNA sequence
Length = 637
Score = 66.6 bits (139), Expect(3) = 8e-026
Identities = 27/58 (46%), Positives = 37/58 (63%)
Frame = -1 / +1
Query: 563 YNVGTGQGRSVTEFVEACKKATGASIKVEYLARRPGDYAEVYSDPSKILMDLNWTAQY 390
YN+GTG+G +V E V A +KA G I V+ RRPGD +VY+ +K +L W A+Y
Sbjct: 313 YNLGTGRGTTVLEMVSAFEKAYGKKIPVKMCPRRPGDSEQVYASTAKAEQELGWRAKY 486
Score = 57.4 bits (119), Expect(3) = 8e-026
Identities = 25/42 (59%), Positives = 27/42 (64%)
Frame = -1 / +1
Query: 713 ALGIIPGLKVRGTDYSTADGTCVRDYIDVTDLVDAHVKALGK 588
A+G P L V G DY T DGT VRDYI V DL D H+ AL K
Sbjct: 154 AVGRRPELNVYGHDYRTRDGTAVRDYIHVVDLADGHIAALEK 279
Score = 31.3 bits (62), Expect(3) = 8e-026
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -1 / +1
Query: 827 MILRYFNVIGSDPEGRLGEAPR 762
++LRYFN IG+ G +GE P+
Sbjct: 49 ILLRYFNPIGAHQSGDIGEDPK 114
>gb|CA013134.1|CA013134 HT07H24r HT Hordeum vulgare subsp. vulgare cDNA clone HT07H24
5-PRIME, mRNA sequence
Length = 566
Score = 115 bits (245), Expect = 6e-025
Identities = 49/114 (42%), Positives = 68/114 (59%)
Frame = -1 / +1
Query: 1193 LQFIYADLGDAKAVKKIFSENAFDAVMHFAAVAYVGESTMEPLRYYHNITSNTLTVLEAM 1014
L+F DL D A++ IFS F+AV+HFA + VGES +PL YY N T+T+L+ M
Sbjct: 163 LEFRKVDLRDKAALEDIFSSQRFEAVIHFAGLKAVGESVEKPLLYYDNNLIGTITLLQVM 342
Query: 1013 AAYNVNTLIYSSTCATYGEPDTMPIVETTPQNPINPYGKAKKMAEDIILDFTKS 852
AA+ L++SS+ YG P +P E P + NPYG+ K + EDI D +S
Sbjct: 343 AAHGCKKLVFSSSATVYGWPKEVPCTEEXPLSATNPYGRTKLVIEDICRDLQRS 504
>gb|BE216452.2|BE216452 HV_CEb0010I13f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0010I13f, mRNA sequence
Length = 697
Score = 114 bits (243), Expect = 1e-024
Identities = 49/114 (42%), Positives = 68/114 (59%)
Frame = -1 / +2
Query: 1193 LQFIYADLGDAKAVKKIFSENAFDAVMHFAAVAYVGESTMEPLRYYHNITSNTLTVLEAM 1014
L+F DL D A++ IFS F+AV+HFA + VGES +PL YY N T+T+L+ M
Sbjct: 323 LEFRKVDLRDKAALEDIFSSQRFEAVIHFAGLKAVGESVEKPLLYYDNNLIGTITLLQVM 502
Query: 1013 AAYNVNTLIYSSTCATYGEPDTMPIVETTPQNPINPYGKAKKMAEDIILDFTKS 852
AA+ L++SS+ YG P +P E P + NPYG+ K + EDI D +S
Sbjct: 503 AAHGCKKLVFSSSATVYGWPKEVPCTEEFPLSATNPYGRTKLVIEDICRDLQRS 664
>gb|BM816326.1|BM816326 HB02F03_T3.ab1 HB Hordeum vulgare subsp. vulgare cDNA clone
HB02F03_T3.ab1 similar to UDP-glucose 4-epimerase,Aldose
1-epimerase,, mRNA sequence
Length = 815
Score = 114 bits (243), Expect = 1e-024
Identities = 49/114 (42%), Positives = 68/114 (59%)
Frame = -1 / +3
Query: 1193 LQFIYADLGDAKAVKKIFSENAFDAVMHFAAVAYVGESTMEPLRYYHNITSNTLTVLEAM 1014
L+F DL D A++ IFS F+AV+HFA + VGES +PL YY N T+T+L+ M
Sbjct: 351 LEFRKVDLRDKAALEDIFSSQRFEAVIHFAGLKAVGESVEKPLLYYDNNLIGTITLLQVM 530
Query: 1013 AAYNVNTLIYSSTCATYGEPDTMPIVETTPQNPINPYGKAKKMAEDIILDFTKS 852
AA+ L++SS+ YG P +P E P + NPYG+ K + EDI D +S
Sbjct: 531 AAHGCKKLVFSSSATVYGWPKEVPCTEEFPLSATNPYGRTKLVIEDICRDLQRS 692
>gb|BM816327.1|BM816327 HB106A04_SK.ab1 HB Hordeum vulgare subsp. vulgare cDNA clone
HB106A04_SK.ab1 similar to UDP-glucose 4-epimerase,Aldose
1-epimerase,, mRNA sequence
Length = 883
Score = 114 bits (243), Expect = 1e-024
Identities = 49/114 (42%), Positives = 68/114 (59%)
Frame = -1 / +2
Query: 1193 LQFIYADLGDAKAVKKIFSENAFDAVMHFAAVAYVGESTMEPLRYYHNITSNTLTVLEAM 1014
L+F DL D A++ IFS F+AV+HFA + VGES +PL YY N T+T+L+ M
Sbjct: 365 LEFRKVDLRDKAALEDIFSSQRFEAVIHFAGLKAVGESVEKPLLYYDNNLIGTITLLQVM 544
Query: 1013 AAYNVNTLIYSSTCATYGEPDTMPIVETTPQNPINPYGKAKKMAEDIILDFTKS 852
AA+ L++SS+ YG P +P E P + NPYG+ K + EDI D +S
Sbjct: 545 AAHGCKKLVFSSSATVYGWPKEVPCTEEFPLSATNPYGRTKLVIEDICRDLQRS 706
>gb|CB882476.1|CB882476 HL01P12w HL Hordeum vulgare subsp. vulgare cDNA clone HL01P12
3-PRIME, mRNA sequence
Length = 628
Score = 114 bits (243), Expect = 1e-024
Identities = 49/114 (42%), Positives = 68/114 (59%)
Frame = -1 / +2
Query: 1193 LQFIYADLGDAKAVKKIFSENAFDAVMHFAAVAYVGESTMEPLRYYHNITSNTLTVLEAM 1014
L+F DL D A++ IFS F+AV+HFA + VGES +PL YY N T+T+L+ M
Sbjct: 236 LEFRKVDLRDKAALEDIFSSQRFEAVIHFAGLKAVGESVEKPLLYYDNNLIGTITLLQVM 415
Query: 1013 AAYNVNTLIYSSTCATYGEPDTMPIVETTPQNPINPYGKAKKMAEDIILDFTKS 852
AA+ L++SS+ YG P +P E P + NPYG+ K + EDI D +S
Sbjct: 416 AAHGCKKLVFSSSATVYGWPKEVPCTEEFPLSATNPYGRTKLVIEDICRDLQRS 577
>gb|CA013313.1|CA013313 HT08A11r HT Hordeum vulgare subsp. vulgare cDNA clone HT08A11
5-PRIME, mRNA sequence
Length = 646
Score = 62.5 bits (130), Expect(4) = 1e-024
Identities = 26/59 (44%), Positives = 36/59 (61%)
Frame = -1 / +3
Query: 566 IYNVGTGQGRSVTEFVEACKKATGASIKVEYLARRPGDYAEVYSDPSKILMDLNWTAQY 390
+YN+GTG+G SV E V A +KA G I + Y RR GD VY+ +K +L W A++
Sbjct: 303 VYNLGTGKGTSVLEMVAAFEKACGKKIPLVYAGRRAGDAETVYAATAKAEKELKWKAKF 479
Score = 60.6 bits (126), Expect(4) = 1e-024
Identities = 26/42 (61%), Positives = 29/42 (69%)
Frame = -1 / +3
Query: 713 ALGIIPGLKVRGTDYSTADGTCVRDYIDVTDLVDAHVKALGK 588
A+G P L V GTDY+T DGT VRDYI V DL D H+ AL K
Sbjct: 144 AVGRRPALTVYGTDYNTKDGTGVRDYIHVVDLADGHIAALRK 269
Score = 23.1 bits (44), Expect(4) = 1e-024
Identities = 6/14 (42%), Positives = 8/14 (57%)
Frame = -1 / +3
Query: 359 WKWQKAHPNGYASA 318
W W +P GY S+
Sbjct: 507 WNWASKNPYGYGSS 548
Score = 22.1 bits (42), Expect(4) = 1e-024
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -1 / +3
Query: 809 NVIGSDPEGRLGEAP 765
N +G+ P G +GE P
Sbjct: 57 NPVGAHPSGYIGEDP 101
>gb|CA013755.1|CA013755 HT09G07r HT Hordeum vulgare subsp. vulgare cDNA clone HT09G07
5-PRIME, mRNA sequence
Length = 530
Score = 61.1 bits (127), Expect(3) = 3e-024
Identities = 20/59 (33%), Positives = 37/59 (62%)
Frame = -1 / +2
Query: 1037 TLTVLEAMAAYNVNTLIYSSTCATYGEPDTMPIVETTPQNPINPYGKAKKMAEDIILDF 861
T+ + + M + N L++SS+ YG+P+ +P VE +P +NPYG+ K E+++ D+
Sbjct: 95 TVNLYDVMKKHGCNKLVFSSSATVYGQPEKVPCVEDSPLKALNPYGRTKLYLEEMLRDY 271
Score = 57.4 bits (119), Expect(3) = 3e-024
Identities = 25/42 (59%), Positives = 27/42 (64%)
Frame = -1 / +2
Query: 713 ALGIIPGLKVRGTDYSTADGTCVRDYIDVTDLVDAHVKALGK 588
A+G P L V G DY T DGT VRDYI V DL D H+ AL K
Sbjct: 404 AVGRRPELNVYGHDYRTRDGTAVRDYIHVVDLADGHIAALEK 529
Score = 31.3 bits (62), Expect(3) = 3e-024
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -1 / +2
Query: 827 MILRYFNVIGSDPEGRLGEAPR 762
++LRYFN IG+ G +GE P+
Sbjct: 299 ILLRYFNPIGAHQSGDIGEDPK 364
>gb|BJ463662.1|BJ463662 BJ463662 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags32p11 5', mRNA sequence
Length = 540
Score = 61.1 bits (127), Expect(3) = 4e-024
Identities = 26/58 (44%), Positives = 36/58 (62%)
Frame = -1 / +1
Query: 563 YNVGTGQGRSVTEFVEACKKATGASIKVEYLARRPGDYAEVYSDPSKILMDLNWTAQY 390
YN+GTG+G SV E V A +KA+G I + RRPGD +++ K +LNW A+Y
Sbjct: 328 YNLGTGKGTSVLEIVNAFEKASGKKIPLVVGQRRPGDAEILFAGTGKAERELNWKAKY 501
Score = 51.5 bits (106), Expect(3) = 4e-024
Identities = 21/42 (50%), Positives = 28/42 (66%)
Frame = -1 / +1
Query: 713 ALGIIPGLKVRGTDYSTADGTCVRDYIDVTDLVDAHVKALGK 588
A+G P + + G +Y+T DGT VRDYI V DL + H+ AL K
Sbjct: 166 AVGRRPSVTIFGNNYATKDGTGVRDYIHVLDLAEGHIAALRK 291
Score = 36.8 bits (74), Expect(3) = 4e-024
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = -1 / +1
Query: 827 MILRYFNVIGSDPEGRLGEAPR 762
++LRYFN +G+ P G LGE PR
Sbjct: 61 ILLRYFNPVGAHPSGYLGEDPR 126
>gb|BU995681.1|BU995681 HM11A08r HM Hordeum vulgare subsp. vulgare cDNA clone HM11A08
5-PRIME, mRNA sequence
Length = 642
Score = 63.4 bits (132), Expect(3) = 6e-024
Identities = 29/57 (50%), Positives = 33/57 (57%)
Frame = -1 / +3
Query: 758 ELREHGRISGACFDAALGIIPGLKVRGTDYSTADGTCVRDYIDVTDLVDAHVKALGK 588
E E + C A+G P L V GTDY+T DGT VRDYI V DL D H+ AL K
Sbjct: 6 EALESPQPDALCPQVAVGRRPALTVYGTDYNTKDGTGVRDYIHVVDLADGHIAALRK 176
Score = 62.5 bits (130), Expect(3) = 6e-024
Identities = 26/59 (44%), Positives = 36/59 (61%)
Frame = -1 / +3
Query: 566 IYNVGTGQGRSVTEFVEACKKATGASIKVEYLARRPGDYAEVYSDPSKILMDLNWTAQY 390
+YN+GTG+G SV E V A +KA G I + Y RR GD VY+ +K +L W A++
Sbjct: 210 VYNLGTGKGTSVLEMVAAFEKACGKKIPLVYAGRRAGDAETVYAATAKAEKELKWKAKF 386
Score = 23.1 bits (44), Expect(3) = 6e-024
Identities = 6/14 (42%), Positives = 8/14 (57%)
Frame = -1 / +3
Query: 359 WKWQKAHPNGYASA 318
W W +P GY S+
Sbjct: 414 WNWASKNPYGYGSS 455
>gb|AV934345.1|AV934345 AV934345 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal8e17 5', mRNA sequence
Length = 595
Score = 110 bits (235), Expect = 2e-023
Identities = 47/107 (43%), Positives = 65/107 (60%)
Frame = -1 / +3
Query: 1193 LQFIYADLGDAKAVKKIFSENAFDAVMHFAAVAYVGESTMEPLRYYHNITSNTLTVLEAM 1014
L+F DL D A++ IFS F+AV+HFA + VGES +PL YY N T+T+L+ M
Sbjct: 270 LEFRKVDLRDKAALEDIFSSQRFEAVIHFAGLKAVGESVEKPLLYYDNNLIGTITLLQVM 449
Query: 1013 AAYNVNTLIYSSTCATYGEPDTMPIVETTPQNPINPYGKAKKMAEDI 873
AA+ L++SS+ YG P +P E P + NPYG+ K + EDI
Sbjct: 450 AAHGCKKLVFSSSATVYGWPKEVPCTEEFPLSATNPYGRTKLVIEDI 590
>gb|BE195461.2|BE195461 HVSMEh0089L18f Hordeum vulgare 5-45 DAP spike EST library HVcDNA0009
(5 to 45 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEh0089L18f, mRNA sequence
Length = 792
Score = 104 bits (222), Expect(2) = 2e-023
Identities = 41/112 (36%), Positives = 66/112 (58%)
Frame = -1 / +1
Query: 1196 RLQFIYADLGDAKAVKKIFSENAFDAVMHFAAVAYVGESTMEPLRYYHNITSNTLTVLEA 1017
RLQFI+ DL ++K+F+ +DAV+HFA + V ES P Y N T+ + +
Sbjct: 205 RLQFIFGDLTIKDDLEKVFAAKRYDAVIHFAGLKAVAESVAHPEMYNRNNIVGTVNLYDV 384
Query: 1016 MAAYNVNTLIYSSTCATYGEPDTMPIVETTPQNPINPYGKAKKMAEDIILDF 861
M + N L++SS+ YG+P+ +P VE +P +NPYG+ K E+++ D+
Sbjct: 385 MKKHGCNKLVFSSSATVYGQPEKVPCVEDSPLKALNPYGRTKLYLEEMLGDY 540
Score = 24.9 bits (48), Expect(2) = 2e-023
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -1 / +2
Query: 809 NVIGSDPEGRLGEAPR 762
N IG+ P G +GE PR
Sbjct: 584 NPIGAHPSGDIGEDPR 631
>gb|AV912136.1|AV912136 AV912136 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak2o06 3', mRNA sequence
Length = 149
Score = 109 bits (233), Expect = 3e-023
Identities = 44/49 (89%), Positives = 45/49 (91%)
Frame = -1 / -1
Query: 779 LGEAPRPELREHGRISGACFDAALGIIPGLKVRGTDYSTADGTCVRDYI 633
LGEAP ELREHGRISGACFDAALGIIPGLKV+GTDY T DGTCVRDYI
Sbjct: 149 LGEAPPXELREHGRISGACFDAALGIIPGLKVKGTDYETPDGTCVRDYI 3
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 517,828,041
Number of Sequences: 312970
Number of extensions: 7567704
Number of successful extensions: 51731
Number of sequences better than 1.0e-020: 78
length of database: 58,378,179
effective HSP length: 53
effective length of database: 41,790,769
effective search space used: 14668559919
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)