TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3067375.2.1
(1829 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AF261107.1|AF261107 Hordeum vulgare sucrose-phosphate sy... 525 0.0
gb|CD662445.1|CD662445 UCRHV18_01cb12_b1 Drought-stressed D... 500 e-141
gb|BE437516.1|BE437516 SFR004.E11F990621 ITEC SFR Barley Le... 440 e-128
gb|BJ466481.1|BJ466481 BJ466481 K. Sato unpublished cDNA li... 419 e-116
gb|BU984860.1|BU984860 HF05E11r HF Hordeum vulgare subsp. v... 411 e-114
gb|BG310233.1|BG310233 HVSMEc0016J09f Hordeum vulgare seedl... 264 e-111
gb|BQ472479.1|BQ472479 HB09H08T BC Hordeum vulgare subsp. v... 264 e-101
gb|AL503268.1|AL503268 AL503268 Hordeum vulgare Barke roots... 304 1e-098
gb|CA022248.1|CA022248 HZ42J07r HZ Hordeum vulgare subsp. v... 355 4e-097
gb|AV914348.1|AV914348 AV914348 K. Sato unpublished cDNA li... 327 1e-088
gb|BE193243.1|BE193243 HVSMEh0080E17f Hordeum vulgare 5-45 ... 242 4e-088
gb|AV931912.1|AV931912 AV931912 K. Sato unpublished cDNA li... 319 3e-086
gb|AV917170.1|AV917170 AV917170 K. Sato unpublished cDNA li... 301 1e-082
gb|BU968420.1|BU968420 HB07H08r BC Hordeum vulgare subsp. v... 177 1e-068
gb|CK123660.1|CK123660 BES1824105a02 BES1824 Hordeum vulgar... 139 6e-067
gb|CA011510.1|CA011510 HT05E02u HT Hordeum vulgare subsp. v... 250 2e-065
gb|BU975604.1|BU975604 HB31K24r BC Hordeum vulgare subsp. v... 87 3e-057
gb|BQ767300.1|BQ767300 EBro08_SQ008_C18_R root, 3 week, dro... 218 9e-056
gb|CA015292.1|CA015292 HT13N20r HT Hordeum vulgare subsp. v... 214 2e-054
gb|BG416908.2|BG416908 HVSMEk0015C11f Hordeum vulgare testa... 172 2e-054
gb|BM444184.1|BM444184 EBem09_SQ004_G12_R embryo, 1 Day ger... 174 1e-042
gb|BI950175.1|BI950175 HVSMEl0019E11f Hordeum vulgare spike... 168 7e-041
gb|BJ468331.1|BJ468331 BJ468331 K. Sato unpublished cDNA li... 167 1e-040
gb|CA016632.1|CA016632 HV08B18u HV Hordeum vulgare subsp. v... 161 8e-040
gb|BE601555.2|BE601555 HVSMEh0098G14f Hordeum vulgare 5-45 ... 161 1e-038
gb|BU994139.1|BU994139 HM05O02r HM Hordeum vulgare subsp. v... 130 1e-038
gb|BU985379.1|BU985379 HF06P13r HF Hordeum vulgare subsp. v... 100 2e-037
gb|CB874869.1|CB874869 HX06J01w HX Hordeum vulgare subsp. v... 146 2e-035
gb|AV833883.1|AV833883 AV833883 K. Sato unpublished cDNA li... 96 9e-034
gb|BJ463533.1|BJ463533 BJ463533 K. Sato unpublished cDNA li... 139 5e-032
gb|BG418110.1|BG418110 HVSMEk0021F18f Hordeum vulgare testa... 132 8e-030
gb|BM442430.2|BM442430 EBan01_SQ003_C15_R anther, yellow st... 129 5e-029
gb|BU985680.1|BU985680 HF08E20r HF Hordeum vulgare subsp. v... 78 2e-027
gb|BG366918.2|BG366918 HVSMEi0008P16f Hordeum vulgare 20 DA... 83 7e-027
gb|BJ454449.1|BJ454449 BJ454449 K. Sato unpublished cDNA li... 111 9e-024
gb|CB880803.1|CB880803 HM07O02w HM Hordeum vulgare subsp. v... 111 9e-024
>gb|AF261107.1|AF261107 Hordeum vulgare sucrose-phosphate synthase mRNA, partial cds
Length = 2085
Score = 525 bits (1141), Expect(4) = 0.0
Identities = 214/292 (73%), Positives = 251/292 (85%)
Frame = -3 / +1
Query: 1506 KEDHKVPVKCRKHISIIAVDSVKKEDLIQIIRNSVEATRTGTMSGSTGFVLSTSLTIAEL 1327
+E K P+ RKHI +I+VDSV KEDL++IIRN++EA T TGFVLSTSLTI+E+
Sbjct: 919 EERSKAPISGRKHIIVISVDSVNKEDLVRIIRNAIEAAHTENTPALTGFVLSTSLTISEI 1098
Query: 1326 QSVIVRTGMLPTDFDAFICNSGSDIYYPLQSSDVPSNSRVTFALDHNYRSHIEYRWGGEG 1147
S++V GM P FDAFICNSGS IYYP S + PSNS+VT +D N++SHIEYRWGGEG
Sbjct: 1099 CSLLVSVGMHPAGFDAFICNSGSSIYYPSYSGNTPSNSKVTHVIDRNHQSHIEYRWGGEG 1278
Query: 1146 LRKYLVKWASSVVERRGRTEKQVIFEDSEHSSTYCLAFRVVNPNHLPPLKELQKLMRIQS 967
LRKYLVKWA+SVVER+GR E+Q+IFEDSEHSSTYCLAF+VVNPNHLPPLKEL+KLMRIQS
Sbjct: 1279 LRKYLVKWATSVVERKGRIERQMIFEDSEHSSTYCLAFKVVNPNHLPPLKELRKLMRIQS 1458
Query: 966 LRCHALYNHGATRLSVIPMHASRSQALRYLSIRWGIELPNAVVIVGETGDSDYEELFGGL 787
LRC+ALYNH ATRLSV P+HASRSQA+RYL +RWGIELPN VVIVGE+GDSDYEEL GGL
Sbjct: 1459 LRCNALYNHSATRLSVTPIHASRSQAIRYLFVRWGIELPNIVVIVGESGDSDYEELLGGL 1638
Query: 786 HKTVIVKGGFNTPANRIHTVRRYPLQDVVALDSSNIIGIEGFSTGDIRSAMQ 631
H+T+I+KG FN ANRIHTVRRYPLQDVVALDSSNII ++G +T DI+SA++
Sbjct: 1639 HRTIILKGDFNIAANRIHTVRRYPLQDVVALDSSNIIEVQGCTTEDIKSALR 1794
Score = 382 bits (828), Expect(3) = e-146
Identities = 179/286 (62%), Positives = 203/286 (70%)
Frame = +2 / -2
Query: 638 ADLMSPVLNPSIPMIFELSRATTSCKGYLLTVWILFAGVLNPPLTMTVLWRXXXXXXXXX 817
ADLMS V+ P MI ELS ATTSCKGYLLTVWILFA +L P + VLWR
Sbjct: 1787 ADLMSSVVQPWTSMILELSSATTSCKGYLLTVWILFAAMLKSPFRIMVLWRPPSSSS*SE 1608
Query: 818 XXXXXTMTTAFGNSMPQRIDKYLRA*DRDACIGITDSLVAPWLYRA*QRSDWILINFCSS 997
TMTT FGNS+PQR +KYL A*+RDA IG+TDSLVA WLY A QRSDWILINF +S
Sbjct: 1607 SPLSPTMTTIFGNSIPQRTNKYLIA*ERDA*IGVTDSLVALWLYSALQRSDWILINFLNS 1428
Query: 998 FKGGK*FGLTTLNARQYVEECSESSKMTCFSVLPLLSTTEEAHLTKYFLKPSPPQRYSIC 1177
F+GG+*FGLTTLNARQ VEECSESSK+ C S+LP LSTTE AH T+YFL+PSPPQRYSIC
Sbjct: 1427 FRGGR*FGLTTLNARQ*VEECSESSKIICLSILPFLSTTEVAHFTRYFLRPSPPQRYSIC 1248
Query: 1178 DR*LWSNANVTRELLGTSLDCNG*YISLPLLHIKASKSVGSMPVRTITDCSSAIVSEVDS 1357
D * S VT ELLG + G* + LPLL +KASK G MP T ++ S IVSEVDS
Sbjct: 1247 D**FRSITCVTLELLGVLPEYEG**MLLPLLQMKASKPAGCMPTDTSSEHISDIVSEVDS 1068
Query: 1358 TKPVEPDIVPVRVASTEFLII*IKSSFLTESTAMIDICFLHFTGTL 1495
TKPV+ + V AS FL+I +SS LTEST + ICFL G L
Sbjct: 1067 TKPVKAGVFSVCAASIAFLMIRTRSSLLTESTEITMICFLPDIGAL 930
Score = 292 bits (631), Expect(3) = e-106
Identities = 141/283 (49%), Positives = 184/283 (65%)
Frame = -2 / +3
Query: 1477 QEAYIYHCCRLC*KGRFNSNYQKLC*GYTHWNYVRFYRFCAVYFTDNSRATVCNSTHRHA 1298
+EAY + CRLC*+G ++++QK *G T+ + F F AV F +N R S RHA
Sbjct: 948 KEAYHCYFCRLC*QGGSSADHQKCN*GRTYRKHTGFNWFRAVNFANNIRDMFTASICRHA 1127
Query: 1297 PD*L*CLYMQ*WERYILSITV**CAKQFPCYICVGP*LPITY*VSLGRRRFKEVLS*VGF 1118
*C ++Q WE ++LS * AKQF Y C ITY*VSLGRRR K+V +G+
Sbjct: 1128 SCWF*CFHLQQWE*HLLSFIFW*YAKQFQGYTCNRSKSSITY*VSLGRRRSKKVSCEMGY 1307
Query: 1117 FSSRKKGEN*KASHL*RFGTLFNILSCI*SG*SKSFASFEGAAKVDENPVTALSCSV*PW 938
FS RKKG+N*KA RF TLF +LSCI*SG SKS AS EG ++DENPV +L C+V*P
Sbjct: 1308 FSGRKKGKN*KADDFRRFRTLFYLLSCI*SGQSKSSASPEGVEEIDENPVASL*CAV*PQ 1487
Query: 937 RHQAICNSNACIAISGSKVFVYSLGHRVAKCCGHCW*NW*F*LRGTVWRSPQDSHR*GWI 758
R+Q +CNS +C+ SG+KV V +LG RVAK CGHCW* W*F L T SPQD + G +
Sbjct: 1488 RYQTVCNSYSCVTFSGNKVLVCTLGDRVAKYCGHCW*KW*FRL*RTARGSPQDHNPEG*L 1667
Query: 757 QHSCE*DPYGQKVPFTGCCCS**LKYHWN*GIQHW*HQVCYAT 629
QH + +P+ +++P GC C+ L+YH + G+ + HQVC A+
Sbjct: 1668 QHCRKQNPHSEEIPLAGCRCTGQLQYH*SPGLHYRGHQVCPAS 1796
Score = 146 bits (313), Expect(5) = 7e-092
Identities = 72/146 (49%), Positives = 95/146 (65%)
Frame = +1 / -1
Query: 640 RPDVTSAESLNSNDI*AIKSNNIL*RVPSDRMDPIRRSVESTLNDDCLVETSKQFLVIRI 819
R DV + +L+ NDI A++ N+IL V +D + +VE TL D VET QF +I I
Sbjct: 1785 RLDVLCSAALDFNDIGAVQCNDILQGVSPHCVDSVCGNVEVTLQDYGPVETP*QFFIIGI 1606
Query: 820 TSFTNNDHSIWQLYAPANRQIP*SLRSRCMHWNYR*PGGAMVIQSMTTQ*LDSHXXXXXX 999
T+FTNNDH+IWQLY PA +Q+P LR+ M+ +YR G A+VIQ +TT+ LDSH
Sbjct: 1605 TTFTNNDHNIWQLYPPAYKQVPYCLRT*RMNRSYRQSGSAVVIQRITTKRLDSHQFPQLL 1426
Query: 1000 XXXXMIWINHSKCKTIC*RVFRIFKD 1077
MIWI+H KCKTI RVF IF++
Sbjct: 1425 QGRQMIWIDHFKCKTIGRRVF*IFEN 1348
Score = 134 bits (288), Expect(5) = 4e-064
Identities = 78/146 (53%), Positives = 88/146 (60%)
Frame = -1 / +2
Query: 1070 KIRNTLQHIVLHLEWLIQIICLL*RSCKS**ESSHCVVMLCITMAPPGYL*FQCMHRDLR 891
KI+NTL IVLHL+W IQIICL *RS +**ESS VVM CIT A P L* M LR
Sbjct: 1355 KIQNTLLPIVLHLKWSIQIICLP*RS*GN**ESSRFVVMRCITTALPDCL*LLFMRHVLR 1534
Query: 890 L*GICLFAGA*SCQMLWSLLVKLVILITRNCLEVSTRQSSLRVDSTLLRIGSIRSEGTLY 711
*G CL+AG *SCQ+LWSLLVK+VI I +NC VST S RV STL + S + T
Sbjct: 1535 Q*GTCLYAGG*SCQILWSLLVKVVIPIMKNC*GVSTGP*S*RVTSTLPQTESTQ*GDTPC 1714
Query: 710 RMXXXXXXXXXXXLRDSALVTSGLLC 633
RM R + TS L C
Sbjct: 1715 RMSLHWTAPISLKSRAALQRTSSLPC 1792
Score = 133 bits (285), Expect(4) = 0.0
Identities = 56/65 (86%), Positives = 60/65 (92%)
Frame = -2 / +1
Query: 1825 FCKCCYFEQFGVTLIEAAMHGLPVIATKNGAPVEIYQVLENGLLVDPHDQHAIADALYKM 1646
F YFEQFGVTLIEAAM+GLPVIATKNGAPVEI+QVL NGLLVDPHDQ+AIADALYK+
Sbjct: 598 FVNVAYFEQFGVTLIEAAMNGLPVIATKNGAPVEIHQVLNNGLLVDPHDQNAIADALYKL 777
Query: 1645 LSEKQ 1631
LSEKQ
Sbjct: 778 LSEKQ 792
Score = 111 bits (236), Expect(4) = 2e-061
Identities = 54/86 (62%), Positives = 59/86 (68%)
Frame = +3 / -3
Query: 849 LATLCPSE*TNTLEPEIAMHALELQIAWWRHGYTEHDNAVTGFSSTFAAPSKEANDLD*P 1028
LATL PS T+TL PE H ELQ W R GYT H N TGFSS + PS EA+DLD*P
Sbjct: 1576 LATLSPSVQTSTLLPENVTHE*ELQTVW*RCGYTAHYNEATGFSSISSTPSGEADDLD*P 1397
Query: 1029 L*MQDNMLKSVPNLQR*LAFQFSPFF 1106
L*MQDN KSV NL++ AFQF PFF
Sbjct: 1396 L*MQDNR*KSVLNLRKSSAFQFFPFF 1319
Score = 102 bits (218), Expect(3) = e-146
Identities = 50/67 (74%), Positives = 53/67 (79%)
Frame = +3 / -2
Query: 1626 QNCFSESIL*RASAIAC*SWGSTRRPFSRT**ISTGAPFFVAITGKPCMAASIKVTPNCS 1805
Q+CFSE L ASA+A *S GSTRRP T* ISTGAPFFVAITGKP +AASIKVTPNCS
Sbjct: 797 QSCFSERSLYSASAMAF*SCGSTRRPLLST*WISTGAPFFVAITGKPFIAASIKVTPNCS 618
Query: 1806 K*QHLQK 1826
K* L K
Sbjct: 617 K*ATLTK 597
Score = 94.5 bits (200), Expect(5) = 7e-092
Identities = 39/67 (58%), Positives = 51/67 (76%)
Frame = +2 / -1
Query: 1628 KLLFRKHLIEGICNCMLIMGINKETIFQNLINFNRSPIFCCNNRQTVHGSLYQGDTKLFK 1807
KLL K I+ ICN +LIM I+KETI ++L++FNRS IFC NNRQT+H LYQG+ KLF+
Sbjct: 795 KLLLGKKFIQCICNGILIMWIDKETIVEHLMDFNRSSIFCSNNRQTIHSGLYQGNAKLFE 616
Query: 1808 ITTFTKA 1828
I+ K+
Sbjct: 615 ISHVDKS 595
Score = 87.2 bits (184), Expect(4) = 0.0
Identities = 33/42 (78%), Positives = 36/42 (85%)
Frame = -3 / +1
Query: 1623 SRCRENGLKNIHQFSWPEHCKNYLSRISSLGPRHPAFACKED 1498
SRCRENGLKNIHQFSWPEHCKN+LSRI +LG R PA KE+
Sbjct: 799 SRCRENGLKNIHQFSWPEHCKNHLSRILTLGMRSPAVGSKEE 924
Score = 84.5 bits (178), Expect(4) = 2e-061
Identities = 42/77 (54%), Positives = 49/77 (63%)
Frame = +1 / -3
Query: 1579 RKLVYIFQSIFSTSRHKTAFQKASYRGHLQLHADHGDQQGDHFPEPDKFQQEPHFLLQ*Q 1758
RK+ F F K A +K Y HLQ H+DH D+QGDH PD FQQE HFL Q*Q
Sbjct: 844 RKIGEYFLVHFLCILTKVASRKEVYTVHLQWHSDHVDRQGDHC*APDGFQQELHFL*Q*Q 665
Query: 1759 ANRAWQPLSR*HQIVQN 1809
AN + +PLSR* QIV+N
Sbjct: 664 ANHS*RPLSR*RQIVRN 614
Score = 74.4 bits (156), Expect(5) = 7e-092
Identities = 32/56 (57%), Positives = 40/56 (71%)
Frame = +1 / -1
Query: 1135 VLP*TFSSPTILNM*SVVMVQRKCNTGIAWHITRL*WIIYIAPTIAYKGIKVSREH 1302
+L *TFSSPTILNM* ++ + CN GIAW ITR+* I+ PT+A + IK SR H
Sbjct: 1290 ILS*TFSSPTILNM*LMISIYYMCNLGIAWRITRI*RIVNATPTVADESIKTSRMH 1123
Score = 73.9 bits (155), Expect(3) = e-146
Identities = 33/53 (62%), Positives = 38/53 (71%)
Frame = +2 / -2
Query: 1493 LWSSLHAKAGCLGPRLDILDK*FLQCSGQENWCIFFNPFSRHLDTKLLFRKHL 1651
L SSL AG L PR++ILD+*FLQCSGQENW IFF+PFS HLD + L
Sbjct: 929 LLSSLLPTAGDLIPRVNILDR*FLQCSGQENW*IFFSPFSLHLDQSCFSERSL 771
Score = 70.7 bits (148), Expect(3) = e-106
Identities = 31/40 (77%), Positives = 35/40 (87%)
Frame = -1 / +2
Query: 1619 DVEKMD*KIYTNFLGLNIARITCQGYQVLVQDILLSHAKK 1500
D EKMD*KI+TNF GLNIARITCQGY +LV D+LLS AK+
Sbjct: 803 DAEKMD*KIFTNFPGLNIARITCQGY*LLV*DLLLSVAKR 922
Score = 63.8 bits (133), Expect(3) = e-106
Identities = 24/37 (64%), Positives = 28/37 (75%)
Frame = -1 / +3
Query: 1811 LF*TIWCHLDRGCHARFACYCNKKWGSC*NLSGSGKW 1701
LF TIW +LDRG + FACYC KKW SC*N SG+ +W
Sbjct: 612 LFRTIWRYLDRGRYEWFACYCYKKWSSC*NPSGAQQW 722
Score = 63.4 bits (132), Expect(5) = 4e-064
Identities = 27/39 (69%), Positives = 30/39 (76%)
Frame = -2 / +3
Query: 1618 MSRKWIEKYTPIFLA*TLQELLVKDIKSWSKTSCFRMQR 1502
M RKW +KY+PIFLA*TLQE VKDI SW + SC R QR
Sbjct: 804 MQRKWTKKYSPIFLA*TLQESPVKDIDSWYEISCCR*QR 920
Score = 61.6 bits (128), Expect(5) = 7e-092
Identities = 25/42 (59%), Positives = 33/42 (78%)
Frame = +3 / -3
Query: 1503 LCMRKQDVLDQDLISLTSNSCNVQAKKIGVYFSIHFLDI*TQ 1628
LC R+Q++ Q+ ISLT +SCNVQA+KIG YF +HFL I T+
Sbjct: 919 LCYRQQEISYQESISLTGDSCNVQARKIGEYFLVHFLCILTK 794
Score = 61.1 bits (127), Expect(4) = 2e-061
Identities = 41/104 (39%), Positives = 52/104 (50%)
Frame = +3 / -3
Query: 1164 DTQYVIGSYGPTQM*HGNCLAHH*TVMDNIYRSHYCI*RHQSQSGXXXXXXXXXXXXXXS 1343
DTQYVI + +* NCLA++ + D+ SH C *+HQ+Q
Sbjct: 1261 DTQYVIDDFDLLHV*PWNCLAYYQNMKDSKCYSHCCR*KHQNQQDACLQILAVNISLILL 1082
Query: 1344 VK*TAQNL*NLT*FQCV*PQQSF**FELNLPF*QSLQQ**IYAS 1475
K TA+N F V PQ F** L+ P *QSLQ+* YAS
Sbjct: 1081 AKLTARNQLKPVCFLYVRPQLHF**SALDPPC*QSLQK*Q*YAS 950
Score = 54.7 bits (113), Expect(5) = 4e-064
Identities = 32/60 (53%), Positives = 37/60 (61%)
Frame = -1 / +2
Query: 1316 *YAQACSRLTLMPLYAIVGAIYIIHYSLVMCQAIPVLHLRWTITTDHILSIVGEEKV*GS 1137
*Y AC L LM A VG + I + LV+ QAIP LH+ +HILSIVGEEKV* S
Sbjct: 1109 *YL*ACILLVLMLSSATVGVAFTILHILVIRQAIPRLHM**IEIINHILSIVGEEKV*ES 1288
Score = 39.6 bits (80), Expect(5) = 4e-064
Identities = 28/62 (45%), Positives = 31/62 (50%)
Frame = -3 / +2
Query: 1812 VILNNLVSP**RLPCTVCXXXXXXXXXXXKFIRFWKMVSLLIPMISMQLQMPSIRCFLKS 1633
+I NNL P**R VC K IR MVSL I MI M LQM I F +S
Sbjct: 611 LISNNLALP**RPL*MVCLLLLQKMELLLKSIRCSTMVSLSIHMIRMPLQMHCINFFPRS 790
Query: 1632 SF 1627
+F
Sbjct: 791 NF 796
Score = 38.6 bits (78), Expect(5) = 7e-092
Identities = 16/29 (55%), Positives = 21/29 (72%)
Frame = +1 / -1
Query: 1393 CSLNRVSDNLN*IFLFNRVYSNDRYMLPA 1479
C LN +SD+ +*I L NRVY N+ MLP+
Sbjct: 1032 CGLNCISDDPH*ILLVNRVYRNNNDMLPS 946
Score = 38.2 bits (77), Expect(4) = 2e-061
Identities = 22/51 (43%), Positives = 26/51 (50%)
Frame = +3 / -3
Query: 639 QT*CHQC*IPQFQ*YLSYQEQQHPVKGTF*PYGSYSQEC*IHP*R*LSCGD 791
QT*C P Q*Y S Q+HP +G G ++C* HP SCGD
Sbjct: 1786 QT*CPL*CSPGLQ*YWSCPVQRHPARGISSLCGFCLRQC*SHPSGLWSCGD 1634
Score = 29.0 bits (57), Expect(5) = 4e-064
Identities = 17/28 (60%), Positives = 18/28 (64%)
Frame = -1 / +2
Query: 1475 GSIYLSLL*TLLKRKI*FKLSETLLRLH 1392
GSI L L*TLL R+I* SE LR H
Sbjct: 950 GSISLLFL*TLLTRRI*CGSSEMQLRPH 1033
Score = 23.5 bits (45), Expect(4) = 0.0
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -1 / +1
Query: 527 FHSIGNVRFCLPVI*CMC 474
FH+ RFCL ++ C C
Sbjct: 1891 FHT*WECRFCL*IVECGC 1944
>gb|CD662445.1|CD662445 UCRHV18_01cb12_b1 Drought-stressed Dicktoo barley epidermis cDNA
library Hordeum vulgare subsp. vulgare cDNA clone
UCRHV18_01cb12, mRNA sequence
Length = 898
Score = 500 bits (1087), Expect = e-141
Identities = 199/246 (80%), Positives = 226/246 (91%)
Frame = -3 / -1
Query: 1368 TGFVLSTSLTIAELQSVIVRTGMLPTDFDAFICNSGSDIYYPLQSSDVPSNSRVTFALDH 1189
TGFVLST LT++E+ S+++ GM PTDFDAFICNSGSD++YPL++ D PS SRVTFALD
Sbjct: 898 TGFVLSTPLTMSEIHSLLISAGMAPTDFDAFICNSGSDLFYPLRAGDSPSTSRVTFALDR 719
Query: 1188 NYRSHIEYRWGGEGLRKYLVKWASSVVERRGRTEKQVIFEDSEHSSTYCLAFRVVNPNHL 1009
NY+SHIEYRWGGEGLRKYLVKWASS+VERRGRTEKQVIFED+EHSST CLAFRVVNPN+L
Sbjct: 718 NYQSHIEYRWGGEGLRKYLVKWASSIVERRGRTEKQVIFEDAEHSSTSCLAFRVVNPNYL 539
Query: 1008 PPLKELQKLMRIQSLRCHALYNHGATRLSVIPMHASRSQALRYLSIRWGIELPNAVVIVG 829
PPLKELQKLMRIQSLRCHALYNH ATRLSVIP+HASRSQALRYLS+RWGIEL N V++VG
Sbjct: 538 PPLKELQKLMRIQSLRCHALYNHSATRLSVIPIHASRSQALRYLSVRWGIELRNVVILVG 359
Query: 828 ETGDSDYEELFGGLHKTVIVKGGFNTPANRIHTVRRYPLQDVVALDSSNIIGIEGFSTGD 649
E+GDSDYEELFGGLHKT+++KG FNTPANRIHTVRRYPLQDV+ALD SNIIG+EG ST D
Sbjct: 358 ESGDSDYEELFGGLHKTIVLKGEFNTPANRIHTVRRYPLQDVIALDCSNIIGVEGCSTDD 179
Query: 648 IRSAMQ 631
+ ++
Sbjct: 178 LTPTLK 161
Score = 362 bits (785), Expect = 3e-099
Identities = 169/239 (70%), Positives = 179/239 (74%)
Frame = +2 / +3
Query: 650 SPVLNPSIPMIFELSRATTSCKGYLLTVWILFAGVLNPPLTMTVLWRXXXXXXXXXXXXX 829
S VL PS PM+FE S A TSC GY LTVWILFAGVLN P VL R
Sbjct: 180 SSVLQPSTPMMFEQSSAMTSCSGYRLTVWILFAGVLNSPFRTIVL*RPPNSSS*SESPLS 359
Query: 830 XTMTTAFGNSMPQRIDKYLRA*DRDACIGITDSLVAPWLYRA*QRSDWILINFCSSFKGG 1009
T T F NSMPQR D+YLRA +RDA IGITDSLVA WL RA*QRSDWILINFCSSFKGG
Sbjct: 360 PTRITTFRNSMPQRTDRYLRAWERDA*IGITDSLVALWL*RA*QRSDWILINFCSSFKGG 539
Query: 1010 K*FGLTTLNARQYVEECSESSKMTCFSVLPLLSTTEEAHLTKYFLKPSPPQRYSICDR*L 1189
K*FGLTTLNARQ VEECS SSK+TCFSVLPLLST EEAH T+YFLKPSPPQRYSI D *L
Sbjct: 540 K*FGLTTLNARQDVEECSASSKITCFSVLPLLSTIEEAHFTRYFLKPSPPQRYSIWDW*L 719
Query: 1190 WSNANVTRELLGTSLDCNG*YISLPLLHIKASKSVGSMPVRTITDCSSAIVSEVDSTKP 1366
SNANVTRE+LG S G* SLPLLH+KASKSVG+MP +C S IV VD+TKP
Sbjct: 720 RSNANVTREVLGESPARKG*NKSLPLLHMKASKSVGAMPADINRECISDIVKGVDNTKP 896
Score = 261 bits (564), Expect = 1e-068
Identities = 127/217 (58%), Positives = 146/217 (67%)
Frame = -2 / -3
Query: 1366 RFCAVYFTDNSRATVCNSTHRHAPD*L*CLYMQ*WERYILSITV**CAKQFPCYICVGP* 1187
RFC V DN R T + RH *C +MQ*WE +IL * K FPC IC+ P*
Sbjct: 896 RFCVVDSLDNVRDTFPINICRHGSYRF*CFHMQ*WE*FILPFAGW*FTKHFPCDICIRP* 717
Query: 1186 LPITY*VSLGRRRFKEVLS*VGFFSSRKKGEN*KASHL*RFGTLFNILSCI*SG*SKSFA 1007
LP+ Y V LGRRRFK+V S VGF SRKKG+N*K S+L*R TL NIL C+*SG SK F
Sbjct: 716 LPVPYRVPLGRRRFKKVSSEVGFLDSRKKGKN*KTSYL*RRRTLLNILPCV*SGQSKLFT 537
Query: 1006 SFEGAAKVDENPVTALSCSV*PWRHQAICNSNACIAISGSKVFVYSLGHRVAKCCGHCW* 827
SFEGAA+VDENPVT LSCS+*P +QAICNSN+CI + GSKV V SLGHRVAK C *
Sbjct: 536 SFEGAAEVDENPVTTLSCSL*PQCYQAICNSNSCITLPGSKVPVCSLGHRVAKRRDSCR* 357
Query: 826 NW*F*LRGTVWRSPQDSHR*GWIQHSCE*DPYGQKVP 716
F LR VWR QD G +QH+ + +P+GQ VP
Sbjct: 356 KRRFRLRRAVWRPSQDDRPEGRVQHTRKQNPHGQAVP 246
Score = 224 bits (484), Expect(2) = 3e-058
Identities = 108/224 (48%), Positives = 141/224 (62%)
Frame = +1 / +2
Query: 631 LHSRPDVTSAESLNSNDI*AIKSNNIL*RVPSDRMDPIRRSVESTLNDDCLVETSKQFLV 810
L SR V A +L+ +D+ AI+ +++L RVP DR+D + VE L DD LV+ SKQ V
Sbjct: 161 LQSRGQVVGAAALDPDDVRAIERDDVLQRVPPDRVDSVCGCVELALQDDRLVKASKQLFV 340
Query: 811 IRITSFTNNDHSIWQLYAPANRQIP*SLRSRCMHWNYR*PGGAMVIQSMTTQ*LDSHXXX 990
I I +FT+ +H + QLYAP NRQ+P*SL + CM+WNYR*PG +VI+SMT *LDSH
Sbjct: 341 I*IAAFTDKNHDVSQLYAPTNRQVP*SLGA*CMNWNYR*PGSTVVIKSMTA**LDSHQLL 520
Query: 991 XXXXXXXMIWINHSKCKTIC*RVFRIFKDDXXXXXXXXXXXXXXXXN*VLP*TFSSPTIL 1170
+IWI+HSK K C* VF +FKD+ +*+L *TFSSPT+L
Sbjct: 521 QLLQRR*IIWIDHSKRKARC*GVFCVFKDNLFFSSSPSFYYRGSPLH*ILS*TFSSPTVL 700
Query: 1171 NM*SVVMVQRKCNTGIAWHITRL*WIIYIAPTIAYKGIKVSREH 1302
+M V+ V KC+TG AW IT + I PTIAY+ IK+ R H
Sbjct: 701 DMGLVITV*CKCHTGSAW*ITSPQRVK*ITPTIAYESIKICRSH 832
Score = 152 bits (327), Expect(2) = 2e-047
Identities = 81/150 (54%), Positives = 92/150 (61%)
Frame = -1 / -2
Query: 1085 SKSSLKIRNTLQHIVLHLEWLIQIICLL*RSCKS**ESSHCVVMLCITMAPPGYL*FQCM 906
+K SLK +NT QH+ L LEW IQII LL*RSC+S**ESSH VML IT PGYL*FQ M
Sbjct: 615 NKLSLKTQNTPQHLALRLEWSIQIIYLL*RSCRS**ESSHYAVMLFITTVLPGYL*FQFM 436
Query: 905 HRDLRL*GICLFAGA*SCQMLWSLLVKLVILITRNCLEVSTRQSSLRVDSTLLRIGSIRS 726
H RL*G CLF GA*SC+ L VK I IT++CLE TR+SS R ST + S RS
Sbjct: 435 HHAPRL*GTCLFVGA*SCETS*FLSVKAAIQITKSCLEAFTRRSS*RASSTHPQTESTRS 256
Query: 725 EGTLYRMXXXXXXXXXXXLRDSALVTSGLL 636
GT + R +A T LL
Sbjct: 255 GGTRCKTSSRSIARTSSGSRAAAPTT*PLL 166
Score = 150 bits (323), Expect(2) = 1e-045
Identities = 79/151 (52%), Positives = 89/151 (58%)
Frame = +3 / +1
Query: 654 QC*IPQFQ*YLSYQEQQHPVKGTF*PYGSYSQEC*IHP*R*LSCGDLQTVPRXXXXXXXX 833
+C P+ +* S + + GT *P G + C* P SC LQT R
Sbjct: 184 RCCSPRPR*CSSNRAR*RLAAGTA*PCGFCLRVC*TRPSGRSSCEGLQTALRNLNRRFHR 363
Query: 834 XXXXXLATLCPSE*TNTLEPEIAMHALELQIAWWRHGYTEHDNAVTGFSSTFAAPSKEAN 1013
ATLCP+E T TLEP MH LELQIAW GY EHD+ VTGFSST AAPSKE N
Sbjct: 364 QESRRFATLCPNEQTGTLEPGSVMHELELQIAW*HCGYKEHDSVVTGFSSTSAAPSKEVN 543
Query: 1014 DLD*PL*MQDNMLKSVPNLQR*LAFQFSPFF 1106
+LD*PL* Q ML+SV LQR*L FQF PFF
Sbjct: 544 NLD*PL*TQGKMLRSVLRLQR*LVFQFFPFF 636
Score = 57.9 bits (120), Expect(2) = 2e-047
Identities = 33/60 (55%), Positives = 36/60 (60%)
Frame = -1 / -2
Query: 1316 *YAQACSRLTLMPLYAIVGAIYIIHYSLVMCQAIPVLHLRWTITTDHILSIVGEEKV*GS 1137
*Y QA LM YAIVG IY LV+ QA+PV HL T+ T I S VGEEKV* S
Sbjct: 846 *YLQAWLLQILMLSYAIVGVIYFTLCGLVIHQALPV*HLH*TVITSPISSTVGEEKV*ES 667
Score = 53.8 bits (111), Expect(2) = 1e-045
Identities = 21/41 (51%), Positives = 26/41 (63%)
Frame = +3 / +1
Query: 1167 TQYVIGSYGPTQM*HGNCLAHH*TVMDNIYRSHYCI*RHQS 1289
T+Y G+YG QM HG CL +H I SHYCI*+HQ+
Sbjct: 697 TRYGTGNYGLMQMSHGKCLVNHQPAKGKINHSHYCI*KHQN 819
Score = 22.1 bits (42), Expect(2) = 3e-058
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +1 / +2
Query: 1342 Q*SRQHKTC 1368
Q SRQHKTC
Sbjct: 872 QGSRQHKTC 898
>gb|BE437516.1|BE437516 SFR004.E11F990621 ITEC SFR Barley Leaf Epidermis Library Hordeum
vulgare subsp. vulgare cDNA clone SF, mRNA sequence
Length = 804
Score = 440 bits (956), Expect(2) = e-128
Identities = 178/235 (75%), Positives = 203/235 (86%)
Frame = -3 / +2
Query: 1419 IIRNSVEATRTGTMSGSTGFVLSTSLTIAELQSVIVRTGMLPTDFDAFICNSGSDIYYPL 1240
IIRN++EA T TGFVLSTSLTI+E+ S++V GM P FDAFICNSGS IYYP
Sbjct: 2 IIRNAIEAAHTENTPALTGFVLSTSLTISEICSLLVSVGMHPAGFDAFICNSGSSIYYPS 181
Query: 1239 QSSDVPSNSRVTFALDHNYRSHIEYRWGGEGLRKYLVKWASSVVERRGRTEKQVIFEDSE 1060
S + PSNS+VT +D N++SHIEYRWGGEGLRKYLVKWA+SVVER+GR E+Q+IFEDSE
Sbjct: 182 YSGNTPSNSKVTHVIDRNHQSHIEYRWGGEGLRKYLVKWATSVVERKGRIERQMIFEDSE 361
Query: 1059 HSSTYCLAFRVVNPNHLPPLKELQKLMRIQSLRCHALYNHGATRLSVIPMHASRSQALRY 880
HSSTYCLAF+VVNPNHLPPLKEL+KLMRIQSLRC+ALYNH ATRLSV P+HASRSQA+RY
Sbjct: 362 HSSTYCLAFKVVNPNHLPPLKELRKLMRIQSLRCNALYNHSATRLSVTPIHASRSQAIRY 541
Query: 879 LSIRWGIELPNAVVIVGETGDSDYEELFGGLHKTVIVKGGFNTPANRIHTVRRYP 715
L +RWGIELPN VVIVGE+GDSDYEEL GGLH+T+ +KG FN ANRIHTVRRYP
Sbjct: 542 LFVRWGIELPNIVVIVGESGDSDYEELLGGLHRTINLKGDFNIAANRIHTVRRYP 706
Score = 321 bits (695), Expect(2) = 1e-090
Identities = 148/236 (62%), Positives = 169/236 (71%)
Frame = +2 / -1
Query: 713 KGYLLTVWILFAGVLNPPLTMTVLWRXXXXXXXXXXXXXXTMTTAFGNSMPQRIDKYLRA 892
+GYLLTVWILFA +L P VLWR TMTT FGNS+PQR +KYL A
Sbjct: 708 QGYLLTVWILFAAMLKSPFRFMVLWRPPSSSS*SESPLSPTMTTIFGNSIPQRTNKYLIA 529
Query: 893 *DRDACIGITDSLVAPWLYRA*QRSDWILINFCSSFKGGK*FGLTTLNARQYVEECSESS 1072
*+RDA IG+TDSLVA WLY A QRSDWILINF +SF+GG+*FGLTTLNARQ VEECSESS
Sbjct: 528 *ERDA*IGVTDSLVALWLYSALQRSDWILINFLNSFRGGR*FGLTTLNARQ*VEECSESS 349
Query: 1073 KMTCFSVLPLLSTTEEAHLTKYFLKPSPPQRYSICDR*LWSNANVTRELLGTSLDCNG*Y 1252
K+ C S+LP LSTTE AH T+YFL+PSPPQRYSICD * S VT ELLG + G*
Sbjct: 348 KIICLSILPFLSTTEVAHFTRYFLRPSPPQRYSICD**FRSITCVTLELLGVLPEYEG** 169
Query: 1253 ISLPLLHIKASKSVGSMPVRTITDCSSAIVSEVDSTKPVEPDIVPVRVASTEFLII 1420
+ LPLL +KASK G MP T ++ S IVSEVDSTKPV+ + V AS FL+I
Sbjct: 168 MLLPLLQMKASKPAGCMPTDTSSEHISDIVSEVDSTKPVKAGVFSVCAASIAFLMI 1
Score = 246 bits (531), Expect = 4e-064
Identities = 121/235 (51%), Positives = 152/235 (64%)
Frame = -2 / +1
Query: 1420 NYQKLC*GYTHWNYVRFYRFCAVYFTDNSRATVCNSTHRHAPD*L*CLYMQ*WERYILSI 1241
++QK *G T+ + F F AV F +N R S RHA *CL++Q WE ++LS
Sbjct: 1 DHQKCN*GRTYRKHTGFNWFRAVNFANNIRDMFTASICRHASCWF*CLHLQQWE*HLLSF 180
Query: 1240 TV**CAKQFPCYICVGP*LPITY*VSLGRRRFKEVLS*VGFFSSRKKGEN*KASHL*RFG 1061
* AKQF Y C ITY*VSLGRRR K+V +G+FS RKKG+N*KA RF
Sbjct: 181 IFW*YAKQFQGYTCNRSKSSITY*VSLGRRRSKKVSCEMGYFSGRKKGKN*KADDFRRFR 360
Query: 1060 TLFNILSCI*SG*SKSFASFEGAAKVDENPVTALSCSV*PWRHQAICNSNACIAISGSKV 881
TLF +LSCI*SG SKS AS EG ++DENPV +L C+V*P R+Q +CNS +C+ SG+KV
Sbjct: 361 TLFYLLSCI*SGQSKSSASPEGVEEIDENPVASL*CAV*PQRYQTVCNSYSCVTFSGNKV 540
Query: 880 FVYSLGHRVAKCCGHCW*NW*F*LRGTVWRSPQDSHR*GWIQHSCE*DPYGQKVP 716
V +LG RVAK CGHCW* W*F L T SPQD G +QH + +P+ +++P
Sbjct: 541 LVCTLGDRVAKYCGHCW*KW*FRL*RTARGSPQDHKSEG*LQHCRKQNPHSEEIP 705
Score = 127 bits (273), Expect(2) = 2e-040
Identities = 71/119 (59%), Positives = 80/119 (67%)
Frame = -1 / +3
Query: 1070 KIRNTLQHIVLHLEWLIQIICLL*RSCKS**ESSHCVVMLCITMAPPGYL*FQCMHRDLR 891
KI+NTL IVLHL+W IQIICL *RS +**ESS VVM CIT A P L* M LR
Sbjct: 351 KIQNTLLPIVLHLKWSIQIICLP*RS*GN**ESSRFVVMRCITTALPDCL*LLFMRHVLR 530
Query: 890 L*GICLFAGA*SCQMLWSLLVKLVILITRNCLEVSTRQSSLRVDSTLLRIGSIRSEGTL 714
*G CL+AG *SCQ+LWSLLVK+VI I +NC VST RV STL + S + TL
Sbjct: 531 Q*GTCLYAGG*SCQILWSLLVKVVIPIMKNC*GVSTGP*I*RVTSTLPQTESTQ*GDTL 707
Score = 125 bits (267), Expect(2) = 7e-045
Identities = 61/121 (50%), Positives = 78/121 (64%)
Frame = +1 / -3
Query: 715 RVPSDRMDPIRRSVESTLNDDCLVETSKQFLVIRITSFTNNDHSIWQLYAPANRQIP*SL 894
RV +D + +VE TL VET QF +I IT+FTNNDH+IWQLY PA +Q+P L
Sbjct: 706 RVSPHCVDSVCGNVEVTLQIYGPVETP*QFFIIGITTFTNNDHNIWQLYPPAYKQVPYCL 527
Query: 895 RSRCMHWNYR*PGGAMVIQSMTTQ*LDSHXXXXXXXXXXMIWINHSKCKTIC*RVFRIFK 1074
R+ M+ +YR G A+VIQ +TT+ LDSH MIWI+H KCKTI RVF IF+
Sbjct: 526 RT*RMNRSYRQSGSAVVIQRITTKRLDSHQFPQLLQGRQMIWIDHFKCKTIGRRVF*IFE 347
Query: 1075 D 1077
+
Sbjct: 346 N 344
Score = 111 bits (236), Expect(2) = 6e-032
Identities = 54/86 (62%), Positives = 59/86 (68%)
Frame = +3 / -2
Query: 849 LATLCPSE*TNTLEPEIAMHALELQIAWWRHGYTEHDNAVTGFSSTFAAPSKEANDLD*P 1028
LATL PS T+TL PE H ELQ W R GYT H N TGFSS + PS EA+DLD*P
Sbjct: 572 LATLSPSVQTSTLLPENVTHE*ELQTVW*RCGYTAHYNEATGFSSISSTPSGEADDLD*P 393
Query: 1029 L*MQDNMLKSVPNLQR*LAFQFSPFF 1106
L*MQDN KSV NL++ AFQF PFF
Sbjct: 392 L*MQDNR*KSVLNLRKSSAFQFFPFF 315
Score = 77.1 bits (162), Expect(2) = 7e-045
Identities = 33/56 (58%), Positives = 41/56 (73%)
Frame = +1 / -3
Query: 1135 VLP*TFSSPTILNM*SVVMVQRKCNTGIAWHITRL*WIIYIAPTIAYKGIKVSREH 1302
+L *TFSSPTILNM* ++ + CN GIAW ITR+* I+ PT+A +GIK SR H
Sbjct: 286 ILS*TFSSPTILNM*LMISIYYMCNLGIAWRITRI*RIVNATPTVADEGIKTSRMH 119
Score = 59.3 bits (123), Expect(2) = 2e-040
Identities = 33/60 (55%), Positives = 38/60 (63%)
Frame = -1 / +3
Query: 1316 *YAQACSRLTLMPLYAIVGAIYIIHYSLVMCQAIPVLHLRWTITTDHILSIVGEEKV*GS 1137
*Y AC L LMP A VG + I + LV+ QAIP LH+ +HILSIVGEEKV* S
Sbjct: 105 *YL*ACILLVLMPSSATVGVAFTILHILVIRQAIPRLHM**IEIINHILSIVGEEKV*ES 284
Score = 47.8 bits (98), Expect(2) = 6e-032
Identities = 31/85 (36%), Positives = 39/85 (45%)
Frame = +3 / -2
Query: 1164 DTQYVIGSYGPTQM*HGNCLAHH*TVMDNIYRSHYCI*RHQSQSGXXXXXXXXXXXXXXS 1343
DTQYVI + +* NCLA++ + D+ SH C *RHQ+Q
Sbjct: 257 DTQYVIDDFDLLHV*PWNCLAYYQNMKDSKCYSHCCR*RHQNQQDACLQILAVNISLILL 78
Query: 1344 VK*TAQNL*NLT*FQCV*PQQSF** 1418
K TA+N F V PQ F**
Sbjct: 77 AKLTARNQLKPVCFLYVRPQLHF** 3
Score = 40.5 bits (82), Expect(2) = e-128
Identities = 17/29 (58%), Positives = 23/29 (79%)
Frame = -3 / +1
Query: 717 PLQDVVALDSSNIIGIEGFSTGDIRSAMQ 631
PLQDVVALDS NII ++ + DI+SA++
Sbjct: 703 PLQDVVALDSVNIIEVQXCTXEDIKSALR 789
Score = 33.6 bits (67), Expect(2) = 1e-090
Identities = 16/27 (59%), Positives = 17/27 (62%)
Frame = +2 / -2
Query: 638 ADLMSPVLNPSIPMIFELSRATTSCKG 718
ADLMS + MI LS ATTSCKG
Sbjct: 782 ADLMSSXVQX*TSMILTLSSATTSCKG 702
>gb|BJ466481.1|BJ466481 BJ466481 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags32g04 3', mRNA sequence
Length = 688
Score = 419 bits (909), Expect = e-116
Identities = 168/198 (84%), Positives = 185/198 (93%)
Frame = -3 / -3
Query: 1224 PSNSRVTFALDHNYRSHIEYRWGGEGLRKYLVKWASSVVERRGRTEKQVIFEDSEHSSTY 1045
PS SRVTFALD NY+SHIEYRWGGEGLRKYLVKWASS+VERRGRTEKQVIFED+EHSST
Sbjct: 683 PSTSRVTFALDRNYQSHIEYRWGGEGLRKYLVKWASSIVERRGRTEKQVIFEDAEHSSTS 504
Query: 1044 CLAFRVVNPNHLPPLKELQKLMRIQSLRCHALYNHGATRLSVIPMHASRSQALRYLSIRW 865
CLAFRVVNPN+LPPLKELQKLMRIQSLRCHALYNH ATRLSVIP+HASRSQALRYLS+RW
Sbjct: 503 CLAFRVVNPNYLPPLKELQKLMRIQSLRCHALYNHSATRLSVIPIHASRSQALRYLSVRW 324
Query: 864 GIELPNAVVIVGETGDSDYEELFGGLHKTVIVKGGFNTPANRIHTVRRYPLQDVVALDSS 685
GIEL N V++VGE+GDSDYEELFGGLHKT+++KG FNTPANRIHTVRRYPLQDV+ALD S
Sbjct: 323 GIELRNVVILVGESGDSDYEELFGGLHKTIVLKGEFNTPANRIHTVRRYPLQDVIALDCS 144
Query: 684 NIIGIEGFSTGDIRSAMQ 631
NIIG+EG ST D+ ++
Sbjct: 143 NIIGVEGCSTDDLTPTLK 90
Score = 308 bits (667), Expect = 6e-083
Identities = 141/192 (73%), Positives = 148/192 (77%)
Frame = +2 / +1
Query: 650 SPVLNPSIPMIFELSRATTSCKGYLLTVWILFAGVLNPPLTMTVLWRXXXXXXXXXXXXX 829
S VL PS PM+FE S A TSC GY LTVWILFAGVLN P VL R
Sbjct: 109 SSVLQPSTPMMFEQSSAMTSCSGYRLTVWILFAGVLNSPFRTIVL*RPPNSSS*SESPLS 288
Query: 830 XTMTTAFGNSMPQRIDKYLRA*DRDACIGITDSLVAPWLYRA*QRSDWILINFCSSFKGG 1009
T T F NS+PQR D+YLRA +RDA IGITDSLVA WL RA*QRSDWILINFCSSFKGG
Sbjct: 289 PTRITTFRNSIPQRTDRYLRAWERDA*IGITDSLVALWL*RA*QRSDWILINFCSSFKGG 468
Query: 1010 K*FGLTTLNARQYVEECSESSKMTCFSVLPLLSTTEEAHLTKYFLKPSPPQRYSICDR*L 1189
K*FGLTTLNARQ VEECS SSK+TCFSVLPLLST EEAH T+YFLKPSPPQRYSI D *L
Sbjct: 469 K*FGLTTLNARQDVEECSASSKITCFSVLPLLSTIEEAHFTRYFLKPSPPQRYSI*DW*L 648
Query: 1190 WSNANVTRELLG 1225
SNANVTRE+LG
Sbjct: 649 RSNANVTREVLG 684
Score = 240 bits (519), Expect = 2e-062
Identities = 114/189 (60%), Positives = 136/189 (71%)
Frame = -2 / -2
Query: 1222 KQFPCYICVGP*LPITY*VSLGRRRFKEVLS*VGFFSSRKKGEN*KASHL*RFGTLFNIL 1043
K FPC IC+ P*LP++Y V LGRRRFK+V S VGF SRKKG+N*K S+L*R TLFNIL
Sbjct: 681 KHFPCDICIRP*LPVSYRVPLGRRRFKKVSSEVGFLDSRKKGKN*KTSYL*RCRTLFNIL 502
Query: 1042 SCI*SG*SKSFASFEGAAKVDENPVTALSCSV*PWRHQAICNSNACIAISGSKVFVYSLG 863
C+*SG SK F SFEGAAKVDENPVT LSCS+*P +QAICNSN+CI + GSKV V SLG
Sbjct: 501 PCV*SGQSKLFTSFEGAAKVDENPVTTLSCSL*PQCYQAICNSNSCITLPGSKVPVCSLG 322
Query: 862 HRVAKCCGHCW*NW*F*LRGTVWRSPQDSHR*GWIQHSCE*DPYGQKVPFTGCCCS**LK 683
+RVAK C * F LR VWR QD G +QH+ + +P+GQ VP +* L+
Sbjct: 321 NRVAKRRDSCR*KRRFRLRRAVWRPSQDDRPEGRVQHTSKQNPHGQAVPAARRHRA*LLE 142
Query: 682 YHWN*GIQH 656
+H + G+QH
Sbjct: 141 HHRSRGLQH 115
Score = 209 bits (451), Expect = 4e-053
Identities = 99/198 (50%), Positives = 128/198 (64%)
Frame = +1 / +3
Query: 631 LHSRPDVTSAESLNSNDI*AIKSNNIL*RVPSDRMDPIRRSVESTLNDDCLVETSKQFLV 810
L SR V A +L+S+D+ AIK +++L RVP DR+D + VE L DD LV+ SKQ V
Sbjct: 90 LQSRGQVVGAAALDSDDVRAIKRDDVLQRVPPDRVDSVCWCVELALQDDRLVKASKQLFV 269
Query: 811 IRITSFTNNDHSIWQLYAPANRQIP*SLRSRCMHWNYR*PGGAMVIQSMTTQ*LDSHXXX 990
I I +FT+ +H + QLY+P NRQ+P*SL + CM+WNYR*PG +VI+SMT *LDSH
Sbjct: 270 I*IAAFTDKNHDVSQLYSPTNRQVP*SLGA*CMNWNYR*PGSTVVIKSMTA**LDSHQLL 449
Query: 991 XXXXXXXMIWINHSKCKTIC*RVFRIFKDDXXXXXXXXXXXXXXXXN*VLP*TFSSPTIL 1170
+IWI+HSK K C*RVF IFKD+ +*+L *TFSSPT+L
Sbjct: 450 QLLQRR*IIWIDHSKRKARC*RVFCIFKDNLFFSSSPSFYYRGSPLH*ILS*TFSSPTVL 629
Query: 1171 NM*SVVMVQRKCNTGIAW 1224
+M V+ V KC+TG AW
Sbjct: 630 DMRLVITV*CKCHTGSAW 683
Score = 155 bits (334), Expect(2) = 9e-042
Identities = 82/150 (54%), Positives = 93/150 (62%)
Frame = -1 / -1
Query: 1085 SKSSLKIRNTLQHIVLHLEWLIQIICLL*RSCKS**ESSHCVVMLCITMAPPGYL*FQCM 906
+K SLK++NTLQH+ L LEW IQII LL*RSCKS**ESSH VML IT PGYL*FQ M
Sbjct: 544 NKLSLKMQNTLQHLALRLEWSIQIIYLL*RSCKS**ESSHYAVMLFITTVLPGYL*FQFM 365
Query: 905 HRDLRL*GICLFAGA*SCQMLWSLLVKLVILITRNCLEVSTRQSSLRVDSTLLRIGSIRS 726
H RL*G CLF G *SC+ L VK I IT++CLE TR+SS R ST + S RS
Sbjct: 364 HHAPRL*GTCLFVGE*SCETS*FLSVKAAIQITKSCLEAFTRRSS*RASSTHQQTESTRS 185
Query: 725 EGTLYRMXXXXXXXXXXXLRDSALVTSGLL 636
GT + R +A T LL
Sbjct: 184 GGTRCKTSSRLIARTSSESRAAAPTT*PLL 95
Score = 153 bits (329), Expect(2) = 2e-039
Identities = 81/151 (53%), Positives = 89/151 (58%)
Frame = +3 / +2
Query: 654 QC*IPQFQ*YLSYQEQQHPVKGTF*PYGSYSQEC*IHP*R*LSCGDLQTVPRXXXXXXXX 833
+C P+ +* S Q + GT *P G C* P SC LQT R
Sbjct: 113 RCCSPRLR*CSSNQAR*RLAAGTA*PCGFCLLVC*TRPSGRSSCEGLQTALRNLNRRFHR 292
Query: 834 XXXXXLATLCPSE*TNTLEPEIAMHALELQIAWWRHGYTEHDNAVTGFSSTFAAPSKEAN 1013
ATL P+E T TLEP MH LELQIAW GY EHD+ VTGFSSTFAAPSKE N
Sbjct: 293 QESRRFATLFPNEQTGTLEPGSVMHELELQIAW*HCGYKEHDSVVTGFSSTFAAPSKEVN 472
Query: 1014 DLD*PL*MQDNMLKSVPNLQR*LAFQFSPFF 1106
+LD*PL* Q MLKSV +LQR*L FQF PFF
Sbjct: 473 NLD*PL*TQGKMLKSVLHLQR*LVFQFFPFF 565
Score = 35.9 bits (72), Expect(2) = 9e-042
Identities = 18/29 (62%), Positives = 20/29 (68%)
Frame = -1 / -1
Query: 1223 QAIPVLHLRWTITTDHILSIVGEEKV*GS 1137
QA+PV HL T+ T I S VGEEKV* S
Sbjct: 682 QALPV*HLH*TVITSLISSTVGEEKV*ES 596
Score = 30.4 bits (60), Expect(2) = 2e-039
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +3 / +2
Query: 1167 TQYVIGSYGPTQM*HGNCLAH 1229
T+Y G+YG QM HG CL +
Sbjct: 626 TRYETGNYGLMQMSHGKCLVN 688
>gb|BU984860.1|BU984860 HF05E11r HF Hordeum vulgare subsp. vulgare cDNA clone HF05E11
5-PRIME, mRNA sequence
Length = 584
Score = 411 bits (892), Expect = e-114
Identities = 163/189 (86%), Positives = 180/189 (95%)
Frame = -3 / +1
Query: 1257 DIYYPLQSSDVPSNSRVTFALDHNYRSHIEYRWGGEGLRKYLVKWASSVVERRGRTEKQV 1078
D++YPL++ D PS SRVTFALD NY+SHIEYRWGGEGLRKYLVKWASS+VERRGRTEKQV
Sbjct: 13 DLFYPLRAGDSPSTSRVTFALDRNYQSHIEYRWGGEGLRKYLVKWASSIVERRGRTEKQV 192
Query: 1077 IFEDSEHSSTYCLAFRVVNPNHLPPLKELQKLMRIQSLRCHALYNHGATRLSVIPMHASR 898
IFED+EHSST CLAFRVVNPN+LPPLKELQKLMRIQSLRCHALYNH ATRLSVIP+HASR
Sbjct: 193 IFEDAEHSSTSCLAFRVVNPNYLPPLKELQKLMRIQSLRCHALYNHSATRLSVIPIHASR 372
Query: 897 SQALRYLSIRWGIELPNAVVIVGETGDSDYEELFGGLHKTVIVKGGFNTPANRIHTVRRY 718
SQALRYLS+RWGIEL N V++VGE+GDSDYEELFGGLHKT+++KG FNTPANRIHTVRRY
Sbjct: 373 SQALRYLSVRWGIELRNVVILVGESGDSDYEELFGGLHKTIVLKGEFNTPANRIHTVRRY 552
Query: 717 PLQDVVALD 691
PLQDV+ALD
Sbjct: 553 PLQDVIALD 579
Score = 294 bits (636), Expect = 1e-078
Identities = 135/182 (74%), Positives = 140/182 (76%)
Frame = +2 / -1
Query: 686 ELSRATTSCKGYLLTVWILFAGVLNPPLTMTVLWRXXXXXXXXXXXXXXTMTTAFGNSMP 865
E S A TSC GY LTVWILFAGVLN P VL R T T F NSMP
Sbjct: 584 EQSSAMTSCSGYRLTVWILFAGVLNSPFRTIVL*RPPNSSS*SESPLSPTRITTFRNSMP 405
Query: 866 QRIDKYLRA*DRDACIGITDSLVAPWLYRA*QRSDWILINFCSSFKGGK*FGLTTLNARQ 1045
QR D+YLRA +RDA IGITDSLVA WL RA*QRSDWILINFCSSFKGGK*FGLTTLNARQ
Sbjct: 404 QRTDRYLRAWERDA*IGITDSLVALWL*RA*QRSDWILINFCSSFKGGK*FGLTTLNARQ 225
Query: 1046 YVEECSESSKMTCFSVLPLLSTTEEAHLTKYFLKPSPPQRYSICDR*LWSNANVTRELLG 1225
VEECS SSK+TCFSVLPLLST EEAH T+YFLKPSPPQRYSI D *L SNANVTRE+LG
Sbjct: 224 DVEECSASSKITCFSVLPLLSTIEEAHFTRYFLKPSPPQRYSIWDW*LRSNANVTREVLG 45
Query: 1226 TS 1231
S
Sbjct: 44 ES 39
Score = 232 bits (501), Expect = 5e-060
Identities = 110/180 (61%), Positives = 127/180 (70%)
Frame = -2 / +3
Query: 1255 YILSITV**CAKQFPCYICVGP*LPITY*VSLGRRRFKEVLS*VGFFSSRKKGEN*KASH 1076
+IL * K FPC IC+ P*LP+ Y V LGRRRFK+V S VGF SRKKG+N*K S+
Sbjct: 15 FILPFAGW*FTKHFPCDICIRP*LPVPYRVPLGRRRFKKVSSEVGFLDSRKKGKN*KTSY 194
Query: 1075 L*RFGTLFNILSCI*SG*SKSFASFEGAAKVDENPVTALSCSV*PWRHQAICNSNACIAI 896
L*R TL NIL C+*SG SK F SFEGAA+VDENPVT LSCS+*P +QAICNSN+CI +
Sbjct: 195 L*RCRTLLNILPCV*SGQSKLFTSFEGAAEVDENPVTTLSCSL*PQCYQAICNSNSCITL 374
Query: 895 SGSKVFVYSLGHRVAKCCGHCW*NW*F*LRGTVWRSPQDSHR*GWIQHSCE*DPYGQKVP 716
GSKV V SLGHRVAK * W F LR VWR QD G +QH+ + +P+GQ VP
Sbjct: 375 PGSKVPVCSLGHRVAKRRDSGR*KWRFRLRRAVWRPSQDDRPEGRVQHTRKQNPHGQAVP 554
Score = 193 bits (415), Expect = 4e-048
Identities = 92/182 (50%), Positives = 117/182 (64%)
Frame = +1 / -3
Query: 688 AIKSNNIL*RVPSDRMDPIRRSVESTLNDDCLVETSKQFLVIRITSFTNNDHSIWQLYAP 867
AI+ +++L RVP DR+D + VE L DD LV+ SKQ VI I +FT+ +H + QLYAP
Sbjct: 582 AIECDDVLQRVPPDRVDSVCGCVELALQDDRLVKASKQLFVI*IATFTDQNHDVSQLYAP 403
Query: 868 ANRQIP*SLRSRCMHWNYR*PGGAMVIQSMTTQ*LDSHXXXXXXXXXXMIWINHSKCKTI 1047
NRQ+P*SL + CM+WNYR*PG +VI+SMT *LDSH +IWI+HSK K
Sbjct: 402 TNRQVP*SLGA*CMNWNYR*PGSTVVIKSMTA**LDSHQLLQLLQRR*IIWIDHSKRKAR 223
Query: 1048 C*RVFRIFKDDXXXXXXXXXXXXXXXXN*VLP*TFSSPTILNM*SVVMVQRKCNTGIAWH 1227
C* VF IFKD+ +*+L *TFSSPT+L+M V+ V KC+TG AW
Sbjct: 222 C*GVFCIFKDNLFFSSSPSFYYRGSPLH*ILS*TFSSPTVLDMGLVITV*CKCHTGSAW* 43
Query: 1228 IT 1233
IT
Sbjct: 42 IT 37
Score = 150 bits (322), Expect(2) = 2e-039
Identities = 75/130 (57%), Positives = 81/130 (62%)
Frame = +3 / -2
Query: 717 GTF*PYGSYSQEC*IHP*R*LSCGDLQTVPRXXXXXXXXXXXXXLATLCPSE*TNTLEPE 896
GT *P G + C* P SC LQT R ATLCP+E T TLEP
Sbjct: 553 GTA*PCGFCLRVC*TRPSGRSSCEGLQTALRNLNRHFHRPESRRFATLCPNEQTGTLEPG 374
Query: 897 IAMHALELQIAWWRHGYTEHDNAVTGFSSTFAAPSKEANDLD*PL*MQDNMLKSVPNLQR 1076
MH LELQIAW GY EHD+ VTGFSST AAPSKE N+LD*PL* Q ML+SV +LQR
Sbjct: 373 SVMHELELQIAW*HCGYKEHDSVVTGFSSTSAAPSKEVNNLD*PL*TQGKMLRSVLHLQR 194
Query: 1077 *LAFQFSPFF 1106
*L FQF PFF
Sbjct: 193 *LVFQFFPFF 164
Score = 149 bits (320), Expect(2) = 2e-041
Identities = 75/123 (60%), Positives = 86/123 (69%)
Frame = -1 / +2
Query: 1085 SKSSLKIRNTLQHIVLHLEWLIQIICLL*RSCKS**ESSHCVVMLCITMAPPGYL*FQCM 906
+K SLK++NT QH+ L LEW IQII LL*RSC+S**ESSH VML IT PGYL*FQ M
Sbjct: 185 NKLSLKMQNTPQHLALRLEWSIQIIYLL*RSCRS**ESSHYAVMLFITTVLPGYL*FQFM 364
Query: 905 HRDLRL*GICLFAGA*SCQMLWSLLVKLVILITRNCLEVSTRQSSLRVDSTLLRIGSIRS 726
H RL*G CLF GA*SC+ VK+ I IT++CLE TR+SS R ST + S RS
Sbjct: 365 HHAPRL*GTCLFVGA*SCETS*FWSVKVAIQITKSCLEAFTRRSS*RASSTHPQTESTRS 544
Query: 725 EGT 717
GT
Sbjct: 545 GGT 553
Score = 41.4 bits (84), Expect(2) = 2e-041
Identities = 22/40 (55%), Positives = 25/40 (62%)
Frame = -1 / +2
Query: 1256 IYIIHYSLVMCQAIPVLHLRWTITTDHILSIVGEEKV*GS 1137
IY LV+ QA+PV HL T+ T I S VGEEKV* S
Sbjct: 14 IYFTLCGLVIHQALPV*HLH*TVITSPISSTVGEEKV*ES 133
Score = 33.6 bits (67), Expect(2) = 2e-039
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +3 / -2
Query: 1167 TQYVIGSYGPTQM*HGNCLAHH 1232
T+Y G+YG QM HG CL +H
Sbjct: 103 TRYGTGNYGLMQMSHGKCLVNH 38
>gb|BG310233.1|BG310233 HVSMEc0016J09f Hordeum vulgare seedling shoot EST library HVcDNA0003
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEc0016J09f, mRNA sequence
Length = 818
Score = 264 bits (570), Expect(5) = e-111
Identities = 106/145 (73%), Positives = 126/145 (86%)
Frame = -3 / +3
Query: 1494 KVPVKCRKHISIIAVDSVKKEDLIQIIRNSVEATRTGTMSGSTGFVLSTSLTIAELQSVI 1315
K P+K RK I +IAVDS K+DL+ II+NS+EAT T+SGSTGFVLSTSLT++E+ S++
Sbjct: 147 KAPIKGRKCIIVIAVDSASKKDLVCIIKNSIEATHKETLSGSTGFVLSTSLTMSEIHSLL 326
Query: 1314 VRTGMLPTDFDAFICNSGSDIYYPLQSSDVPSNSRVTFALDHNYRSHIEYRWGGEGLRKY 1135
+ GM PTDFDAFICNSGSD++YPL++ D PS SRVTFALD NY+SHIEYRWGGEGLRKY
Sbjct: 327 ISAGMAPTDFDAFICNSGSDLFYPLRAGDSPSTSRVTFALDRNYQSHIEYRWGGEGLRKY 506
Query: 1134 LVKWASSVVERRGRTEKQVIFEDSE 1060
LVKW SS+VERRGRTEKQVIFED+E
Sbjct: 507 LVKWDSSIVERRGRTEKQVIFEDAE 581
Score = 249 bits (538), Expect(3) = 3e-085
Identities = 121/190 (63%), Positives = 135/190 (71%)
Frame = +2 / -2
Query: 926 SLVAPWLYRA*QRSDWILINFCSSFKGGK*FGLTTLNARQYVEECSESSKMTCFSVLPLL 1105
SLVA WL RA QRSDWI INFCSSFKGGK* + + S SSK+TCFSVLPLL
Sbjct: 715 SLVAXWL*RACQRSDWIFINFCSSFKGGK*LD*PL*TQGKMLRRVSASSKITCFSVLPLL 536
Query: 1106 STTEEAHLTKYFLKPSPPQRYSICDR*LWSNANVTRELLGTSLDCNG*YISLPLLHIKAS 1285
ST EE+H T+YFLKPSPPQRYSI D *L SNANVTRE+LG S G* SLPLLH+KAS
Sbjct: 535 STIEESHFTRYFLKPSPPQRYSIWDW*LRSNANVTREVLGESPARKG*NKSLPLLHMKAS 356
Query: 1286 KSVGSMPVRTITDCSSAIVSEVDSTKPVEPDIVPVRVASTEFLII*IKSSFLTESTAMID 1465
KSVG+MP +C S IV EVD+TKPVEPD V + VAS EF +I +S L ESTA+
Sbjct: 355 KSVGAMPADINRECISDIVKEVDNTKPVEPDNVSLCVASIEFFMIQTRSFLLAESTAITM 176
Query: 1466 ICFLHFTGTL 1495
I FL G L
Sbjct: 175 IHFLPLIGAL 146
Score = 138 bits (297), Expect(5) = 6e-064
Identities = 71/142 (50%), Positives = 84/142 (59%)
Frame = -2 / +2
Query: 1492 GACEVQEAYIYHCCRLC*KGRFNSNYQKLC*GYTHWNYVRFYRFCAVYFTDNSRATVCNS 1313
G + +E Y +C R C R ++K GYT N VRF RFC V F DN R T +
Sbjct: 149 GTYQGKEVYHCYCRRFCQ*ERSGLYHKKFYRGYT*RNVVRFNRFCVVDFLDNVRDTFPIN 328
Query: 1312 THRHAPD*L*CLYMQ*WERYILSITV**CAKQFPCYICVGP*LPITY*VSLGRRRFKEVL 1133
RH *C +MQ*WE +IL * K FPC IC+ P*LP+ Y V LGRRRFK+V
Sbjct: 329 ICRHGSYRF*CFHMQ*WE*FILPFAGW*FTKHFPCDICIRP*LPVPYRVPLGRRRFKKVS 508
Query: 1132 S*VGFFSSRKKGEN*KASHL*R 1067
S VG SRKKG+N*K S+L*R
Sbjct: 509 SEVGLLDSRKKGKN*KTSYL*R 574
Score = 92.7 bits (196), Expect(5) = e-111
Identities = 34/42 (80%), Positives = 37/42 (88%)
Frame = -3 / +3
Query: 1623 SRCRENGLKNIHQFSWPEHCKNYLSRISSLGPRHPAFACKED 1498
SRCRENGLKNIH+FSWPEHCKNYLSRI +L PR+PAF ED
Sbjct: 15 SRCRENGLKNIHRFSWPEHCKNYLSRILTLSPRYPAFPSNED 140
Score = 83.1 bits (175), Expect(3) = 3e-085
Identities = 34/44 (77%), Positives = 38/44 (86%)
Frame = +2 / -2
Query: 1493 LWSSLHAKAGCLGPRLDILDK*FLQCSGQENWCIFFNPFSRHLD 1624
+WSSL KAG LG R++ILDK*FLQCSGQEN CIFF+PFS HLD
Sbjct: 145 IWSSLLGKAGYLGLRVNILDK*FLQCSGQENRCIFFSPFSLHLD 14
Score = 73.5 bits (154), Expect(5) = 2e-050
Identities = 32/42 (76%), Positives = 36/42 (85%)
Frame = +1 / -1
Query: 1495 VVFFACESRMSWTKT*YP*QVILAMFRPRKLVYIFQSIFSTS 1620
+VF A +SR+SW K+*YP QVILAMFRPRK VYIFQ IFSTS
Sbjct: 143 LVFIARKSRVSWAKS*YPRQVILAMFRPRKPVYIFQPIFSTS 18
Score = 70.3 bits (147), Expect(5) = 6e-064
Identities = 31/41 (75%), Positives = 33/41 (80%)
Frame = -1 / +1
Query: 1619 DVEKMD*KIYTNFLGLNIARITCQGYQVLVQDILLSHAKKT 1497
DVEKM *KIYT FLGLNIARITC+GY +L QD LL A KT
Sbjct: 19 DVEKMG*KIYTGFLGLNIARITCRGY*LLAQDTLLFRAMKT 141
Score = 69.3 bits (145), Expect(5) = 2e-050
Identities = 35/81 (43%), Positives = 46/81 (56%)
Frame = +1 / -1
Query: 1060 FRIFKDDXXXXXXXXXXXXXXXXN*VLP*TFSSPTILNM*SVVMVQRKCNTGIAWHITRL 1239
F +FKD+ +*+L *TFSSPT+L+M V+ V KC+TG AW IT
Sbjct: 581 FCVFKDNLFFSSSPSFYYRGVPLH*ILS*TFSSPTVLDMGLVITV*CKCHTGSAW*ITSP 402
Query: 1240 *WIIYIAPTIAYKGIKVSREH 1302
+ I PTIAY+ IK+ R H
Sbjct: 401 QRVK*ITPTIAYESIKICRSH 339
Score = 67.5 bits (141), Expect(5) = 5e-031
Identities = 30/44 (68%), Positives = 33/44 (75%)
Frame = +3 / -3
Query: 1497 GLLCMRKQDVLDQDLISLTSNSCNVQAKKIGVYFSIHFLDI*TQ 1628
GL C KQ +L +LIS TSNSCNVQAKK GVYFS HFL I T+
Sbjct: 141 GLHCSEKQGILG*ELISSTSNSCNVQAKKTGVYFSAHFLYILTR 10
Score = 65.7 bits (137), Expect(3) = 3e-025
Identities = 29/41 (70%), Positives = 31/41 (75%)
Frame = -2 / +2
Query: 1618 MSRKWIEKYTPIFLA*TLQELLVKDIKSWSKTSCFRMQRRP 1496
M RKW EKYTP+FLA*TLQELLV+DI S K CF Q RP
Sbjct: 20 M*RKWAEKYTPVFLA*TLQELLVEDINS*PKIPCFSEQ*RP 142
Score = 65.2 bits (136), Expect(5) = e-111
Identities = 26/31 (83%), Positives = 29/31 (93%)
Frame = -3 / +3
Query: 1017 NHLPPLKELQKLMRIQSLRCHALYNHGATRL 925
N+LPPLKELQKLM+IQSLR HALYNH AT+L
Sbjct: 624 NYLPPLKELQKLMKIQSLRWHALYNHXATKL 716
Score = 57.9 bits (120), Expect(3) = 3e-025
Identities = 33/60 (55%), Positives = 36/60 (60%)
Frame = -1 / +1
Query: 1316 *YAQACSRLTLMPLYAIVGAIYIIHYSLVMCQAIPVLHLRWTITTDHILSIVGEEKV*GS 1137
*Y QA LM YAIVG IY LV+ QA+PV HL T+ T I S VGEEKV* S
Sbjct: 325 *YLQAWLLQILMLSYAIVGVIYFTLCGLVIHQALPV*HLH*TVITSPISSTVGEEKV*ES 504
Score = 53.8 bits (111), Expect(5) = 5e-031
Identities = 21/41 (51%), Positives = 26/41 (63%)
Frame = +3 / -3
Query: 1167 TQYVIGSYGPTQM*HGNCLAHH*TVMDNIYRSHYCI*RHQS 1289
T+Y G+YG QM HG CL +H I SHYCI*+HQ+
Sbjct: 474 TRYGTGNYGLMQMSHGKCLVNHQPAKGKINHSHYCI*KHQN 352
Score = 53.3 bits (110), Expect(5) = 2e-050
Identities = 26/55 (47%), Positives = 34/55 (61%)
Frame = +1 / -1
Query: 1342 Q*SRQHKTCRT*HSSSACSLNRVSDNLN*IFLFNRVYSNDRYMLPALHRHLVVFF 1506
Q SRQHKTC T* CSL+R+ + + IFL R+Y N+ LP+L R L + F
Sbjct: 299 QGSRQHKTC*T*QRFFMCSLDRIFYDTDQIFLTGRIYGNNNDTLPSLDRCLNLVF 135
Score = 51.9 bits (107), Expect(5) = 6e-064
Identities = 21/29 (72%), Positives = 25/29 (86%)
Frame = -2 / +2
Query: 1012 FASFEGAAKVDENPVTALSCSV*PWRHQA 926
F SFEGAA+VDENPVT L+CS+*P +QA
Sbjct: 629 FTSFEGAAEVDENPVTTLACSL*PXGYQA 715
Score = 49.2 bits (101), Expect(5) = 2e-050
Identities = 20/32 (62%), Positives = 24/32 (75%)
Frame = +3 / -3
Query: 921 QIAWWRHGYTEHDNAVTGFSSTFAAPSKEAND 1016
++AW GY EH + VTGFSST AAPSKE N+
Sbjct: 720 RLAW*PCGYKEHASVVTGFSSTSAAPSKEVNN 625
Score = 36.8 bits (74), Expect(3) = 3e-025
Identities = 23/48 (47%), Positives = 28/48 (58%)
Frame = -1 / +1
Query: 1085 SKSSLKIRNTLQHIVLHLEWLIQIICLL*RSCKS**ESSHCVVMLCIT 942
+K SLK + L + II LL*RSC+S**+SSH ML IT
Sbjct: 556 NKLSLKTQKHASTSCLAFRVVNPIIYLL*RSCRS**KSSHYAGMLFIT 699
Score = 33.6 bits (67), Expect(5) = 6e-064
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = -3 / +1
Query: 1089 EKQVIFEDSEHSSTYCLAFRVVNP 1018
+ ++ + +H+ST CLAFRVVNP
Sbjct: 553 KNKLSLKTQKHASTSCLAFRVVNP 624
Score = 33.6 bits (67), Expect(5) = 5e-031
Identities = 22/45 (48%), Positives = 29/45 (64%)
Frame = +3 / -3
Query: 1341 SVK*TAQNL*NLT*FQCV*PQQSF**FELNLPF*QSLQQ**IYAS 1475
S K T QNL NLT F V*P+ +F *+ +L + Q+L+Q* Y S
Sbjct: 300 SRKSTTQNLLNLTTFLYV*PR*NFL*YRPDLSYWQNLRQ*Q*YTS 166
Score = 30.9 bits (61), Expect(5) = e-111
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = -1 / +2
Query: 1064 RNTLQHIVLHLEWLIQI 1014
RNT QH+ L LEW IQ+
Sbjct: 578 RNTPQHLALRLEWSIQL 628
Score = 29.5 bits (58), Expect(5) = 2e-050
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = +2 / -1
Query: 1019 GLTTLNARQYVEEC 1060
GLTTLNARQ VE C
Sbjct: 623 GLTTLNARQDVEAC 582
Score = 27.6 bits (54), Expect(5) = e-111
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = -3 / +1
Query: 924 SVIPMHASRSQALRYLSIRWGIELPNAVVIVGE 826
S IP+HA RSQAL+ L G + ++ GE
Sbjct: 718 SGIPIHA*RSQALKNLCGPLGPRVAKLQILAGE 816
Score = 27.2 bits (53), Expect(5) = 5e-031
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = +3 / -3
Query: 1068 LQR*LAFQFSPFF 1106
LQR*L FQF PFF
Sbjct: 573 LQR*LVFQFFPFF 535
Score = 26.3 bits (51), Expect(5) = 6e-064
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = -2 / +3
Query: 925 ICNSNACIAISGSKVFVYSLG 863
I NSN+CI + G K V SLG
Sbjct: 717 IGNSNSCITLPGFKEPVRSLG 779
Score = 25.8 bits (50), Expect(5) = 5e-031
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +1 / -3
Query: 1018 WINHSKCKTIC*RVF 1062
WI+HSK K C* VF
Sbjct: 624 WIDHSKRKARC*GVF 580
Score = 24.0 bits (46), Expect(3) = 3e-085
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +1 / -3
Query: 877 QIP*SLRSRCMHWNYR 924
Q+ *SL + CM+WN R
Sbjct: 765 QVL*SLGALCMNWNSR 718
>gb|BQ472479.1|BQ472479 HB09H08T BC Hordeum vulgare subsp. vulgare cDNA clone HB09H08
5-PRIME, mRNA sequence
Length = 642
Score = 264 bits (570), Expect(3) = e-101
Identities = 106/143 (74%), Positives = 125/143 (87%)
Frame = -3 / +2
Query: 1494 KVPVKCRKHISIIAVDSVKKEDLIQIIRNSVEATRTGTMSGSTGFVLSTSLTIAELQSVI 1315
K P+K RK I +IAVDS K+DL+ II+NS+EAT T+SGSTGFVLSTSLT++E+ S++
Sbjct: 212 KAPIKGRKCIIVIAVDSASKKDLVCIIKNSIEATHKETLSGSTGFVLSTSLTMSEIHSLL 391
Query: 1314 VRTGMLPTDFDAFICNSGSDIYYPLQSSDVPSNSRVTFALDHNYRSHIEYRWGGEGLRKY 1135
+ GM PTDFDAFICNSGSD++YPL++ D PS SRVTFALD NY+SHIEYRWGGEGLRKY
Sbjct: 392 ISAGMAPTDFDAFICNSGSDLFYPLRAGDSPSTSRVTFALDRNYQSHIEYRWGGEGLRKY 571
Query: 1134 LVKWASSVVERRGRTEKQVIFED 1066
LVKWASS+VERRGRTEKQVIFED
Sbjct: 572 LVKWASSIVERRGRTEKQVIFED 640
Score = 197 bits (425), Expect(3) = 4e-076
Identities = 95/143 (66%), Positives = 106/143 (74%)
Frame = +2 / -1
Query: 1067 SSKMTCFSVLPLLSTTEEAHLTKYFLKPSPPQRYSICDR*LWSNANVTRELLGTSLDCNG 1246
SSK+TCFSVLPLLST EEAH T+YFLKPSPPQRYSI D *L SNANVTRE+LG S G
Sbjct: 639 SSKITCFSVLPLLSTIEEAHFTRYFLKPSPPQRYSIWDW*LRSNANVTREVLGESPARKG 460
Query: 1247 *YISLPLLHIKASKSVGSMPVRTITDCSSAIVSEVDSTKPVEPDIVPVRVASTEFLII*I 1426
* SLPLLH+KASKSVG+MP +C S IV EVD+TKPVEPD V + VAS EF +I
Sbjct: 459 *NKSLPLLHMKASKSVGAMPADINRECISDIVKEVDNTKPVEPDNVSLCVASIEFFMIQT 280
Query: 1427 KSSFLTESTAMIDICFLHFTGTL 1495
+S L ESTA+ I FL G L
Sbjct: 279 RSFLLAESTAITMIHFLPLIGAL 211
Score = 141 bits (303), Expect(3) = 9e-052
Identities = 72/142 (50%), Positives = 85/142 (59%)
Frame = -2 / +1
Query: 1492 GACEVQEAYIYHCCRLC*KGRFNSNYQKLC*GYTHWNYVRFYRFCAVYFTDNSRATVCNS 1313
G + +E Y +C R C R ++K GYT N VRF RFC V F DN R T +
Sbjct: 214 GTYQGKEVYHCYCRRFCQ*ERSGLYHKKFYRGYT*RNVVRFNRFCVVDFLDNVRDTFPIN 393
Query: 1312 THRHAPD*L*CLYMQ*WERYILSITV**CAKQFPCYICVGP*LPITY*VSLGRRRFKEVL 1133
RH *C +MQ*WE +IL * K FPC IC+ P*LP+ Y V LGRRRFK+V
Sbjct: 394 ICRHGSYRF*CFHMQ*WE*FILPFAGW*FTKHFPCDICIRP*LPVPYRVPLGRRRFKKVS 573
Query: 1132 S*VGFFSSRKKGEN*KASHL*R 1067
S VGF SRKKG+N*K S+L*R
Sbjct: 574 SEVGFLDSRKKGKN*KTSYL*R 639
Score = 92.7 bits (196), Expect(3) = e-101
Identities = 34/42 (80%), Positives = 37/42 (88%)
Frame = -3 / +2
Query: 1623 SRCRENGLKNIHQFSWPEHCKNYLSRISSLGPRHPAFACKED 1498
SRCRENGLKNIH+FSWPEHCKNYLSRI +L PR+PAF ED
Sbjct: 80 SRCRENGLKNIHRFSWPEHCKNYLSRILTLSPRYPAFPSNED 205
Score = 85.4 bits (180), Expect(3) = 4e-076
Identities = 36/53 (67%), Positives = 41/53 (77%)
Frame = +2 / -1
Query: 1493 LWSSLHAKAGCLGPRLDILDK*FLQCSGQENWCIFFNPFSRHLDTKLLFRKHL 1651
+WSSL KAG LG R++ILDK*FLQCSGQEN CIFF+PFS HLD L + L
Sbjct: 210 IWSSLLGKAGYLGLRVNILDK*FLQCSGQENRCIFFSPFSLHLDQSCLSERSL 52
Score = 73.5 bits (154), Expect(4) = 9e-045
Identities = 32/42 (76%), Positives = 36/42 (85%)
Frame = +1 / -3
Query: 1495 VVFFACESRMSWTKT*YP*QVILAMFRPRKLVYIFQSIFSTS 1620
+VF A +SR+SW K+*YP QVILAMFRPRK VYIFQ IFSTS
Sbjct: 208 LVFIARKSRVSWAKS*YPRQVILAMFRPRKPVYIFQPIFSTS 83
Score = 70.3 bits (147), Expect(3) = 9e-052
Identities = 31/41 (75%), Positives = 33/41 (80%)
Frame = -1 / +3
Query: 1619 DVEKMD*KIYTNFLGLNIARITCQGYQVLVQDILLSHAKKT 1497
DVEKM *KIYT FLGLNIARITC+GY +L QD LL A KT
Sbjct: 84 DVEKMG*KIYTGFLGLNIARITCRGY*LLAQDTLLFRAMKT 206
Score = 68.9 bits (144), Expect(4) = 9e-045
Identities = 35/79 (44%), Positives = 45/79 (56%)
Frame = +1 / -3
Query: 1066 IFKDDXXXXXXXXXXXXXXXXN*VLP*TFSSPTILNM*SVVMVQRKCNTGIAWHITRL*W 1245
IFKD+ +*+L *TFSSPT+L+M V+ V KC+TG AW IT
Sbjct: 640 IFKDNLFFSSSPSFYYRGSPLH*ILS*TFSSPTVLDMGLVITV*CKCHTGSAW*ITSPQR 461
Query: 1246 IIYIAPTIAYKGIKVSREH 1302
+ I PTIAY+ IK+ R H
Sbjct: 460 VK*ITPTIAYESIKICRSH 404
Score = 67.5 bits (141), Expect(4) = 2e-028
Identities = 30/44 (68%), Positives = 33/44 (75%)
Frame = +3 / -2
Query: 1497 GLLCMRKQDVLDQDLISLTSNSCNVQAKKIGVYFSIHFLDI*TQ 1628
GL C KQ +L +LIS TSNSCNVQAKK GVYFS HFL I T+
Sbjct: 206 GLHCSEKQGILG*ELISSTSNSCNVQAKKTGVYFSAHFLYILTR 75
Score = 53.8 bits (111), Expect(4) = 2e-028
Identities = 21/41 (51%), Positives = 26/41 (63%)
Frame = +3 / -2
Query: 1167 TQYVIGSYGPTQM*HGNCLAHH*TVMDNIYRSHYCI*RHQS 1289
T+Y G+YG QM HG CL +H I SHYCI*+HQ+
Sbjct: 539 TRYGTGNYGLMQMSHGKCLVNHQPAKGKINHSHYCI*KHQN 417
Score = 53.3 bits (110), Expect(4) = 9e-045
Identities = 26/55 (47%), Positives = 34/55 (61%)
Frame = +1 / -3
Query: 1342 Q*SRQHKTCRT*HSSSACSLNRVSDNLN*IFLFNRVYSNDRYMLPALHRHLVVFF 1506
Q SRQHKTC T* CSL+R+ + + IFL R+Y N+ LP+L R L + F
Sbjct: 364 QGSRQHKTC*T*QRFFMCSLDRIFYDTDQIFLTGRIYGNNNDTLPSLDRCLNLVF 200
Score = 51.9 bits (107), Expect(3) = e-101
Identities = 20/24 (83%), Positives = 22/24 (91%)
Frame = -2 / +2
Query: 1702 GLLVDPHDQHAIADALYKMLSEKQ 1631
G VDPHDQHAIADALYK+LS+KQ
Sbjct: 2 GTRVDPHDQHAIADALYKLLSDKQ 73
Score = 42.8 bits (87), Expect(3) = 4e-076
Identities = 19/26 (73%), Positives = 20/26 (76%)
Frame = +3 / -1
Query: 1626 QNCFSESIL*RASAIAC*SWGSTRRP 1703
Q+C SE L* ASAIAC*SWGST P
Sbjct: 78 QSCLSERSL*SASAIAC*SWGSTLVP 1
Score = 42.3 bits (86), Expect(4) = 9e-045
Identities = 19/32 (59%), Positives = 21/32 (65%)
Frame = +2 / -3
Query: 1598 FNPFSRHLDTKLLFRKHLIEGICNCMLIMGIN 1693
F P +LL RK LIE ICNCMLI+GIN
Sbjct: 106 FQPIFSTS*PELLVRKKLIECICNCMLIVGIN 11
Score = 33.6 bits (67), Expect(4) = 2e-028
Identities = 22/45 (48%), Positives = 29/45 (64%)
Frame = +3 / -2
Query: 1341 SVK*TAQNL*NLT*FQCV*PQQSF**FELNLPF*QSLQQ**IYAS 1475
S K T QNL NLT F V*P+ +F *+ +L + Q+L+Q* Y S
Sbjct: 365 SRKSTTQNLLNLTTFLYV*PR*NFL*YRPDLSYWQNLRQ*Q*YTS 231
Score = 31.8 bits (63), Expect(3) = 9e-052
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = -3 / +3
Query: 1692 LIPMISMQLQMPSIRCFLKSS 1630
LIP ISMQLQM SI FL S+
Sbjct: 12 LIPTISMQLQMHSISFFLTSN 74
Score = 27.6 bits (54), Expect(4) = 2e-028
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +3 / -2
Query: 1065 NLQR*LAFQFSPFF 1106
+LQR*L FQF PFF
Sbjct: 641 HLQR*LVFQFFPFF 600
>gb|AL503268.1|AL503268 AL503268 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW01G06T 5', mRNA sequence
Length = 683
Score = 304 bits (659), Expect(3) = 1e-098
Identities = 124/179 (69%), Positives = 147/179 (82%)
Frame = -3 / +1
Query: 1506 KEDHKVPVKCRKHISIIAVDSVKKEDLIQIIRNSVEATRTGTMSGSTGFVLSTSLTIAEL 1327
+E K P+ RKHI +I+VDSV KEDL++IIRN++EA T TGFVLSTSLTI+E+
Sbjct: 73 EERSKAPISXRKHIIVISVDSVNKEDLVRIIRNAIEAAHTENTPALTGFVLSTSLTISEI 252
Query: 1326 QSVIVRTGMLPTDFDAFICNSGSDIYYPLQSSDVPSNSRVTFALDHNYRSHIEYRWGGEG 1147
S++V GM P FDAFICN GS IYYP S + PSNS+VT +D N++SHIEYRWGGEG
Sbjct: 253 CSLLVSVGMHPAGFDAFICNXGSSIYYPSYSGNTPSNSKVTHVIDRNHQSHIEYRWGGEG 432
Query: 1146 LRKYLVKWASSVVERRGRTEKQVIFEDSEHSSTYCLAFRVVNPNHLPPLKELQKLMRIQ 970
LRKYLVKWA+SVVER+GR E+Q+IFEDSEHSSTY LAF+VVNPNHLPPLKEL+KLMRIQ
Sbjct: 433 LRKYLVKWATSVVERKGRIERQMIFEDSEHSSTYXLAFKVVNPNHLPPLKELRKLMRIQ 609
Score = 229 bits (494), Expect(3) = 2e-071
Identities = 108/175 (61%), Positives = 125/175 (71%)
Frame = +2 / -1
Query: 971 WILINFCSSFKGGK*FGLTTLNARQYVEECSESSKMTCFSVLPLLSTTEEAHLTKYFLKP 1150
WILINF +SF+GG+*FGLTTLNA Q VEECSESSK+ C S+LP LSTTE AH T+YFL+P
Sbjct: 608 WILINFLNSFRGGR*FGLTTLNAXQ*VEECSESSKIICLSILPFLSTTEVAHFTRYFLRP 429
Query: 1151 SPPQRYSICDR*LWSNANVTRELLGTSLDCNG*YISLPLLHIKASKSVGSMPVRTITDCS 1330
SPPQRYSICD * S VT ELLG + G* + LPLL +KASK G MP T ++
Sbjct: 428 SPPQRYSICD**FRSITCVTLELLGVLPEYEG**MLLPLLQMKASKPAGCMPTDTSSEHI 249
Query: 1331 SAIVSEVDSTKPVEPDIVPVRVASTEFLII*IKSSFLTESTAMIDICFLHFTGTL 1495
S IVSEVDSTKPV+ + V AS FL+I +SS LTEST + ICFL G L
Sbjct: 248 SDIVSEVDSTKPVKAGVFSVCAASIAFLMIRTRSSLLTESTEITMICFLXDIGAL 84
Score = 155 bits (333), Expect(3) = 2e-048
Identities = 84/169 (49%), Positives = 105/169 (62%)
Frame = -2 / +3
Query: 1477 QEAYIYHCCRLC*KGRFNSNYQKLC*GYTHWNYVRFYRFCAVYFTDNSRATVCNSTHRHA 1298
+EAY + CRLC*+G ++++QK *G T+ + F F AV F +N R S RHA
Sbjct: 102 KEAYHCYFCRLC*QGGSSADHQKCN*GRTYRKHTGFNWFRAVNFANNIRDMFTASICRHA 281
Query: 1297 PD*L*CLYMQ*WERYILSITV**CAKQFPCYICVGP*LPITY*VSLGRRRFKEVLS*VGF 1118
*C ++Q E ++LS * AKQF Y C ITY*VSLGRRR K+V +G+
Sbjct: 282 SCWF*CFHLQQXE*HLLSFIFW*YAKQFQGYTCNRSKSSITY*VSLGRRRSKKVSCEMGY 461
Query: 1117 FSSRKKGEN*KASHL*RFGTLFNILSCI*SG*SKSFASFEGAAKVDENP 971
FS RKKG+N*KA RF TLF +L CI*SG SKS AS EG ++DENP
Sbjct: 462 FSGRKKGKN*KADDFRRFRTLFYLLXCI*SGQSKSSASPEGVEEIDENP 608
Score = 72.1 bits (151), Expect(5) = 4e-040
Identities = 31/56 (55%), Positives = 39/56 (69%)
Frame = +1 / -3
Query: 1135 VLP*TFSSPTILNM*SVVMVQRKCNTGIAWHITRL*WIIYIAPTIAYKGIKVSREH 1302
+L *TFSSPTILNM* ++ + CN GIAW ITR+* I+ P +A + IK SR H
Sbjct: 444 ILS*TFSSPTILNM*LMISIYYMCNLGIAWRITRI*RIVNATPXVADESIKTSRMH 277
Score = 62.9 bits (131), Expect(5) = 4e-040
Identities = 30/45 (66%), Positives = 34/45 (75%)
Frame = +3 / -2
Query: 972 GFSSTFAAPSKEANDLD*PL*MQDNMLKSVPNLQR*LAFQFSPFF 1106
GFSS + PS EA+DLD*PL*MQ N KSV NL++ AFQF PFF
Sbjct: 607 GFSSISSTPSGEADDLD*PL*MQXNR*KSVLNLRKSSAFQFFPFF 473
Score = 52.4 bits (108), Expect(4) = 1e-022
Identities = 31/60 (51%), Positives = 36/60 (60%)
Frame = -1 / +2
Query: 1316 *YAQACSRLTLMPLYAIVGAIYIIHYSLVMCQAIPVLHLRWTITTDHILSIVGEEKV*GS 1137
*Y AC L LM A G + I + LV+ QAIP LH+ +HILSIVGEEKV* S
Sbjct: 263 *YL*ACILLVLMLSSATXGVAFTILHILVIRQAIPRLHM**IEIINHILSIVGEEKV*ES 442
Score = 51.9 bits (107), Expect(3) = 1e-098
Identities = 20/25 (80%), Positives = 23/25 (92%)
Frame = -3 / +2
Query: 972 QSLRCHALYNHGATRLSVIPMHASR 898
+SLRC+ALYNH ATRLSV P+HASR
Sbjct: 608 RSLRCNALYNHSATRLSVTPIHASR 682
Score = 45.5 bits (93), Expect(4) = 1e-022
Identities = 23/33 (69%), Positives = 26/33 (78%)
Frame = -1 / +2
Query: 1070 KIRNTLQHIVLHLEWLIQIICLL*RSCKS**ES 972
KI+NTL I LHL+W IQIICL *RS +**ES
Sbjct: 509 KIQNTLLPIXLHLKWSIQIICLP*RS*GN**ES 607
Score = 44.6 bits (91), Expect(3) = 1e-098
Identities = 17/26 (65%), Positives = 20/26 (76%)
Frame = -3 / +1
Query: 1575 PEHCKNYLSRISSLGPRHPAFACKED 1498
PEHCKN+LSRI +LG R PA KE+
Sbjct: 1 PEHCKNHLSRILTLGMRSPAVGSKEE 78
Score = 43.7 bits (89), Expect(3) = 2e-071
Identities = 19/24 (79%), Positives = 20/24 (83%)
Frame = +2 / -3
Query: 899 RDACIGITDSLVAPWLYRA*QRSD 970
RDA IG+TDSLVA WLY A QRSD
Sbjct: 681 RDA*IGVTDSLVALWLYSALQRSD 610
Score = 42.3 bits (86), Expect(3) = 2e-048
Identities = 18/24 (75%), Positives = 21/24 (87%)
Frame = -1 / +2
Query: 1571 NIARITCQGYQVLVQDILLSHAKK 1500
NIARITCQGY +LV D+LLS AK+
Sbjct: 5 NIARITCQGY*LLV*DLLLSXAKR 76
Score = 38.6 bits (78), Expect(5) = 4e-040
Identities = 16/29 (55%), Positives = 21/29 (72%)
Frame = +1 / -3
Query: 1393 CSLNRVSDNLN*IFLFNRVYSNDRYMLPA 1479
C LN +SD+ +*I L NRVY N+ MLP+
Sbjct: 186 CGLNCISDDPH*ILLVNRVYRNNNDMLPS 100
Score = 37.3 bits (75), Expect(3) = 2e-071
Identities = 18/27 (66%), Positives = 21/27 (77%)
Frame = +2 / -1
Query: 1493 LWSSLHAKAGCLGPRLDILDK*FLQCS 1573
L SSL AG L PR++ILD+*FLQCS
Sbjct: 83 LLSSLLPTAGDLIPRVNILDR*FLQCS 3
Score = 36.8 bits (74), Expect(5) = 4e-040
Identities = 17/23 (73%), Positives = 19/23 (82%)
Frame = +1 / -3
Query: 1504 FACESRMSWTKT*YP*QVILAMF 1572
FA +SR S TK+ YP*QVILAMF
Sbjct: 72 FAXDSRRSHTKSQYP*QVILAMF 4
Score = 35.0 bits (70), Expect(3) = 2e-048
Identities = 12/23 (52%), Positives = 18/23 (78%)
Frame = -2 / +1
Query: 970 VTALSCSV*PWRHQAICNSNACI 902
V +L C+V*P R+Q +CNS +C+
Sbjct: 610 VASL*CAV*PQRYQTVCNSYSCV 678
Score = 35.0 bits (70), Expect(4) = 1e-022
Identities = 15/23 (65%), Positives = 16/23 (69%)
Frame = -2 / +3
Query: 1570 TLQELLVKDIKSWSKTSCFRMQR 1502
TLQE VKDI SW + SC R QR
Sbjct: 6 TLQESPVKDIDSWYEISCCRXQR 74
Score = 29.5 bits (58), Expect(4) = 1e-022
Identities = 20/44 (45%), Positives = 23/44 (52%)
Frame = -1 / +2
Query: 1523 ILLSHAKKTTRCL*SAGSIYLSLL*TLLKRKI*FKLSETLLRLH 1392
+L +K R GSI L L*TLL R+I* SE LR H
Sbjct: 56 LLSXAKRKGVRHQYXEGSISLLFL*TLLTRRI*CGSSEMQLRPH 187
Score = 29.0 bits (57), Expect(5) = 4e-040
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +3 / -1
Query: 906 HALELQIAWWRHGYTEHDNAVT 971
H ELQ W R GYT H N T
Sbjct: 674 HE*ELQTVW*RCGYTAHYNEAT 609
>gb|CA022248.1|CA022248 HZ42J07r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ42J07
5-PRIME, mRNA sequence
Length = 594
Score = 355 bits (770), Expect = 4e-097
Identities = 143/170 (84%), Positives = 159/170 (93%)
Frame = -3 / +3
Query: 1140 KYLVKWASSVVERRGRTEKQVIFEDSEHSSTYCLAFRVVNPNHLPPLKELQKLMRIQSLR 961
KYLVKWASS+VERRGRTEKQVIFED+EHSST CLAFRVVNPN+LPPLKELQKLMRIQSLR
Sbjct: 12 KYLVKWASSIVERRGRTEKQVIFEDAEHSSTSCLAFRVVNPNYLPPLKELQKLMRIQSLR 191
Query: 960 CHALYNHGATRLSVIPMHASRSQALRYLSIRWGIELPNAVVIVGETGDSDYEELFGGLHK 781
CHALYNH ATRLSVIP+HASRSQALRYLS+RWGIEL N V++VGE+GDSDYEELFGGLHK
Sbjct: 192 CHALYNHSATRLSVIPIHASRSQALRYLSVRWGIELRNVVILVGESGDSDYEELFGGLHK 371
Query: 780 TVIVKGGFNTPANRIHTVRRYPLQDVVALDSSNIIGIEGFSTGDIRSAMQ 631
T+++KG FNTPANRIHTVRRYPLQDV+ALD SNIIG+EG ST D+ ++
Sbjct: 372 TIVLKGEFNTPANRIHTVRRYPLQDVIALDCSNIIGVEGCSTDDLTPTLK 521
Score = 259 bits (561), Expect = 3e-068
Identities = 118/164 (71%), Positives = 123/164 (75%)
Frame = +2 / -3
Query: 650 SPVLNPSIPMIFELSRATTSCKGYLLTVWILFAGVLNPPLTMTVLWRXXXXXXXXXXXXX 829
S VL PS PM+FE S A TSC GY LTVWILFAGVLN P VL R
Sbjct: 502 SSVLQPSTPMMFEQSSAMTSCSGYRLTVWILFAGVLNSPFRTIVL*RPPNSSS*SESPLS 323
Query: 830 XTMTTAFGNSMPQRIDKYLRA*DRDACIGITDSLVAPWLYRA*QRSDWILINFCSSFKGG 1009
T T F NSMPQR D+YLRA +RDA IGITDSLVA WL RA*QRSDWILINFCSSFKGG
Sbjct: 322 PTRITTFRNSMPQRTDRYLRAWERDA*IGITDSLVALWL*RA*QRSDWILINFCSSFKGG 143
Query: 1010 K*FGLTTLNARQYVEECSESSKMTCFSVLPLLSTTEEAHLTKYF 1141
K*FGLTTLNARQ VEECS SSK+TCFSVLPLLST EEAH T+YF
Sbjct: 142 K*FGLTTLNARQDVEECSASSKITCFSVLPLLSTIEEAHFTRYF 11
Score = 186 bits (400), Expect = 4e-046
Identities = 88/143 (61%), Positives = 103/143 (72%)
Frame = -2 / +2
Query: 1144 KEVLS*VGFFSSRKKGEN*KASHL*RFGTLFNILSCI*SG*SKSFASFEGAAKVDENPVT 965
++V S VGF SRKKG+N*K S+L*R TL NIL C+*SG SK F SFEGAA+VDENPVT
Sbjct: 8 RKVSSEVGFLDSRKKGKN*KTSYL*RCRTLLNILPCV*SGQSKLFTSFEGAAEVDENPVT 187
Query: 964 ALSCSV*PWRHQAICNSNACIAISGSKVFVYSLGHRVAKCCGHCW*NW*F*LRGTVWRSP 785
LSCS+*P +QAICNSN+CI + GSKV V SLGHRVAK * W F LR VWR
Sbjct: 188 TLSCSL*PQCYQAICNSNSCITLPGSKVPVCSLGHRVAKRRDSGR*KWRFRLRRAVWRPS 367
Query: 784 QDSHR*GWIQHSCE*DPYGQKVP 716
QD G +QH+ + +P+GQ VP
Sbjct: 368 QDDRPEGRVQHTRKQNPHGQAVP 436
Score = 169 bits (363), Expect = 5e-041
Identities = 78/150 (52%), Positives = 101/150 (67%)
Frame = +1 / -2
Query: 631 LHSRPDVTSAESLNSNDI*AIKSNNIL*RVPSDRMDPIRRSVESTLNDDCLVETSKQFLV 810
L SR V A +L+ +D+ AI+ +++L RVP DR+D + VE L DD LV+ SKQ V
Sbjct: 521 LQSRGQVVGAAALDPDDVRAIECDDVLQRVPPDRVDSVCGCVELALQDDRLVKASKQLFV 342
Query: 811 IRITSFTNNDHSIWQLYAPANRQIP*SLRSRCMHWNYR*PGGAMVIQSMTTQ*LDSHXXX 990
I I +FT+ +H + QLYAP NRQ+P*SL + CM+WNYR*PG +VI+SMT *LDSH
Sbjct: 341 I*IATFTDQNHDVSQLYAPTNRQVP*SLGA*CMNWNYR*PGSTVVIKSMTA**LDSHQLL 162
Query: 991 XXXXXXXMIWINHSKCKTIC*RVFRIFKDD 1080
+IWI+HSK K C* VF IFKD+
Sbjct: 161 QLLQRR*IIWIDHSKRKARC*GVFCIFKDN 72
Score = 151 bits (325), Expect = 9e-036
Identities = 80/150 (53%), Positives = 93/150 (62%)
Frame = -1 / +1
Query: 1085 SKSSLKIRNTLQHIVLHLEWLIQIICLL*RSCKS**ESSHCVVMLCITMAPPGYL*FQCM 906
+K SLK++NT QH+ L LEW IQII LL*RSC+S**ESSH VML IT PGYL*FQ M
Sbjct: 67 NKLSLKMQNTPQHLALRLEWSIQIIYLL*RSCRS**ESSHYAVMLFITTVLPGYL*FQFM 246
Query: 905 HRDLRL*GICLFAGA*SCQMLWSLLVKLVILITRNCLEVSTRQSSLRVDSTLLRIGSIRS 726
H RL*G CLF GA*SC+ VK+ I IT++CLE TR+SS R ST + S RS
Sbjct: 247 HHAPRL*GTCLFVGA*SCETS*FWSVKVAIQITKSCLEAFTRRSS*RASSTHPQTESTRS 426
Query: 725 EGTLYRMXXXXXXXXXXXLRDSALVTSGLL 636
GT + R +A T LL
Sbjct: 427 GGTRCKTSSHSIARTSSGSRAAAPTT*PLL 516
Score = 150 bits (322), Expect = 2e-035
Identities = 75/130 (57%), Positives = 81/130 (62%)
Frame = +3 / -1
Query: 717 GTF*PYGSYSQEC*IHP*R*LSCGDLQTVPRXXXXXXXXXXXXXLATLCPSE*TNTLEPE 896
GT *P G + C* P SC LQT R ATLCP+E T TLEP
Sbjct: 435 GTA*PCGFCLRVC*TRPSGRSSCEGLQTALRNLNRHFHRPESRRFATLCPNEQTGTLEPG 256
Query: 897 IAMHALELQIAWWRHGYTEHDNAVTGFSSTFAAPSKEANDLD*PL*MQDNMLKSVPNLQR 1076
MH LELQIAW GY EHD+ VTGFSST AAPSKE N+LD*PL* Q ML+SV +LQR
Sbjct: 255 SVMHELELQIAW*HCGYKEHDSVVTGFSSTSAAPSKEVNNLD*PL*TQGKMLRSVLHLQR 76
Query: 1077 *LAFQFSPFF 1106
*L FQF PFF
Sbjct: 75 *LVFQFFPFF 46
>gb|AV914348.1|AV914348 AV914348 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags5m14 5', mRNA sequence
Length = 475
Score = 327 bits (709), Expect = 1e-088
Identities = 132/155 (85%), Positives = 146/155 (94%)
Frame = -3 / +1
Query: 1155 GEGLRKYLVKWASSVVERRGRTEKQVIFEDSEHSSTYCLAFRVVNPNHLPPLKELQKLMR 976
GEGLRKYLVKWA+SVVER+GR E+Q+IFEDSEHSSTYCLAF+VVNPNHLPPLKEL+KLMR
Sbjct: 10 GEGLRKYLVKWATSVVERKGRIERQMIFEDSEHSSTYCLAFKVVNPNHLPPLKELRKLMR 189
Query: 975 IQSLRCHALYNHGATRLSVIPMHASRSQALRYLSIRWGIELPNAVVIVGETGDSDYEELF 796
IQSLRC+ALYNH ATRLSV P+HASRSQA+RYL +RWGIELPN VVIVGE+GDSDYEEL
Sbjct: 190 IQSLRCNALYNHSATRLSVTPIHASRSQAIRYLFVRWGIELPNIVVIVGESGDSDYEELL 369
Query: 795 GGLHKTVIVKGGFNTPANRIHTVRRYPLQDVVALD 691
GGLH+T+I+KG FN ANRIHTVRRYPLQDVVALD
Sbjct: 370 GGLHRTIILKGDFNIAANRIHTVRRYPLQDVVALD 474
Score = 249 bits (539), Expect = 3e-065
Identities = 107/155 (69%), Positives = 120/155 (77%)
Frame = +2 / -3
Query: 692 SRATTSCKGYLLTVWILFAGVLNPPLTMTVLWRXXXXXXXXXXXXXXTMTTAFGNSMPQR 871
S ATTSCKGYLLTVWILFA +L P + VLWR TMTT FGNS+PQR
Sbjct: 473 SSATTSCKGYLLTVWILFAAMLKSPFRIMVLWRPPSSSS*SESPLSPTMTTIFGNSIPQR 294
Query: 872 IDKYLRA*DRDACIGITDSLVAPWLYRA*QRSDWILINFCSSFKGGK*FGLTTLNARQYV 1051
+KYL A*+RDA IG+TDSLVA WLY A QRSDWILINF +SF+GG+*FGLTTLNARQ V
Sbjct: 293 TNKYLIA*ERDA*IGVTDSLVALWLYSALQRSDWILINFLNSFRGGR*FGLTTLNARQ*V 114
Query: 1052 EECSESSKMTCFSVLPLLSTTEEAHLTKYFLKPSP 1156
EECSESSK+ C S+LP LSTTE AH T+YFL+PSP
Sbjct: 113 EECSESSKIICLSILPFLSTTEVAHFTRYFLRPSP 9
Score = 194 bits (419), Expect = 1e-048
Identities = 85/154 (55%), Positives = 109/154 (70%)
Frame = -2 / +3
Query: 1156 RRRFKEVLS*VGFFSSRKKGEN*KASHL*RFGTLFNILSCI*SG*SKSFASFEGAAKVDE 977
RRR K+V +G+FS RKKG+N*KA RF TLF +LSCI*SG SKS AS EG ++DE
Sbjct: 9 RRRSKKVSCEMGYFSGRKKGKN*KADDFRRFRTLFYLLSCI*SGQSKSSASPEGVEEIDE 188
Query: 976 NPVTALSCSV*PWRHQAICNSNACIAISGSKVFVYSLGHRVAKCCGHCW*NW*F*LRGTV 797
NPV +L C+V*P R+Q +CNS +C+ SG+KV V +LG RVAK CGHCW* W*F L T
Sbjct: 189 NPVASL*CAV*PQRYQTVCNSYSCVTFSGNKVLVCTLGDRVAKYCGHCW*KW*FRL*RTA 368
Query: 796 WRSPQDSHR*GWIQHSCE*DPYGQKVPFTGCCCS 695
SPQD + G +QH + +P+ +++P GC C+
Sbjct: 369 RGSPQDHNPEG*LQHCRKQNPHSEEIPLAGCRCT 470
Score = 132 bits (283), Expect = 6e-030
Identities = 64/129 (49%), Positives = 84/129 (65%)
Frame = +1 / -2
Query: 691 IKSNNIL*RVPSDRMDPIRRSVESTLNDDCLVETSKQFLVIRITSFTNNDHSIWQLYAPA 870
++ N+IL V +D + +VE TL D VET QF +I IT+FTNNDH+IWQLY PA
Sbjct: 474 VQCNDILQGVSPHCVDSVCGNVEVTLQDYGPVETP*QFFIIGITTFTNNDHNIWQLYPPA 295
Query: 871 NRQIP*SLRSRCMHWNYR*PGGAMVIQSMTTQ*LDSHXXXXXXXXXXMIWINHSKCKTIC 1050
+Q+P LR+ M+ +YR G A+VIQ +TT+ LDSH MIWI+H KCKTI
Sbjct: 294 YKQVPYCLRT*RMNRSYRQSGSAVVIQRITTKRLDSHQFPQLLQGRQMIWIDHFKCKTIG 115
Query: 1051 *RVFRIFKD 1077
RVF IF++
Sbjct: 114 RRVF*IFEN 88
Score = 131 bits (280), Expect = 1e-029
Identities = 73/122 (59%), Positives = 82/122 (67%)
Frame = -1 / +2
Query: 1070 KIRNTLQHIVLHLEWLIQIICLL*RSCKS**ESSHCVVMLCITMAPPGYL*FQCMHRDLR 891
KI+NTL IVLHL+W IQIICL *RS +**ESS VVM CIT A P L* M LR
Sbjct: 95 KIQNTLLPIVLHLKWSIQIICLP*RS*GN**ESSRFVVMRCITTALPDCL*LLFMRHVLR 274
Query: 890 L*GICLFAGA*SCQMLWSLLVKLVILITRNCLEVSTRQSSLRVDSTLLRIGSIRSEGTLY 711
*G CL+AG *SCQ+LWSLLVK+VI I +NC VST S RV STL + S + T
Sbjct: 275 Q*GTCLYAGG*SCQILWSLLVKVVIPIMKNC*GVSTGP*S*RVTSTLPQTESTQ*GDTPC 454
Query: 710 RM 705
RM
Sbjct: 455 RM 460
Score = 111 bits (236), Expect(2) = 3e-026
Identities = 54/86 (62%), Positives = 59/86 (68%)
Frame = +3 / -1
Query: 849 LATLCPSE*TNTLEPEIAMHALELQIAWWRHGYTEHDNAVTGFSSTFAAPSKEANDLD*P 1028
LATL PS T+TL PE H ELQ W R GYT H N TGFSS + PS EA+DLD*P
Sbjct: 316 LATLSPSVQTSTLLPENVTHE*ELQTVW*RCGYTAHYNEATGFSSISSTPSGEADDLD*P 137
Query: 1029 L*MQDNMLKSVPNLQR*LAFQFSPFF 1106
L*MQDN KSV NL++ AFQF PFF
Sbjct: 136 L*MQDNR*KSVLNLRKSSAFQFFPFF 59
Score = 28.6 bits (56), Expect(2) = 3e-026
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +3 / -1
Query: 699 QQHPVKGTF*PYGSYSQEC*IHP*R*LSCGD 791
Q+HP +G G ++C* HP SCGD
Sbjct: 466 QRHPARGISSLCGFCLRQC*SHPSGLWSCGD 374
>gb|BE193243.1|BE193243 HVSMEh0080E17f Hordeum vulgare 5-45 DAP spike EST library HVcDNA0009
(5 to 45 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEh0080E17f, mRNA sequence
Length = 689
Score = 242 bits (522), Expect(3) = 4e-088
Identities = 95/142 (66%), Positives = 121/142 (85%)
Frame = -3 / +1
Query: 1494 KVPVKCRKHISIIAVDSVKKEDLIQIIRNSVEATRTGTMSGSTGFVLSTSLTIAELQSVI 1315
K P+K RK I +IAVDS K+DL+ II+NS+EAT T+SGSTGFVLSTSLT++E+ S++
Sbjct: 106 KAPIKGRKCIIVIAVDSASKKDLVCIIKNSIEATHKETLSGSTGFVLSTSLTMSEIHSLL 285
Query: 1314 VRTGMLPTDFDAFICNSGSDIYYPLQSSDVPSNSRVTFALDHNYRSHIEYRWGGEGLRKY 1135
+ GM PTDFDAFICNSGSD++YPL++ D PS SRVTFALD NY+SHIEY WGGEG+RKY
Sbjct: 286 ISAGMAPTDFDAFICNSGSDLFYPLRAGDSPSTSRVTFALDRNYQSHIEYPWGGEGVRKY 465
Query: 1134 LVKWASSVVERRGRTEKQVIFE 1069
LVKWASS+V+R+GRTE ++ ++
Sbjct: 466 LVKWASSIVKRKGRTENKLFWK 531
Score = 171 bits (369), Expect(3) = 2e-062
Identities = 85/137 (62%), Positives = 95/137 (69%)
Frame = +2 / -1
Query: 1085 FSVLPLLSTTEEAHLTKYFLKPSPPQRYSICDR*LWSNANVTRELLGTSLDCNG*YISLP 1264
FSVLP L T EEAH T+YFL PSPP YSI D *L SNANVTRE+LG S G* SLP
Sbjct: 515 FSVLPFLFTIEEAHFTRYFLTPSPPHGYSIWDW*LRSNANVTREVLGESPARKG*NKSLP 336
Query: 1265 LLHIKASKSVGSMPVRTITDCSSAIVSEVDSTKPVEPDIVPVRVASTEFLII*IKSSFLT 1444
LLH+KASKSVG+MP +C S IV EVD+TKPVEPD V + VAS EF +I +S L
Sbjct: 335 LLHMKASKSVGAMPADINRECISDIVKEVDNTKPVEPDNVSLCVASIEFFMIQTRSFLLA 156
Query: 1445 ESTAMIDICFLHFTGTL 1495
ESTA+ I FL G L
Sbjct: 155 ESTAITMIHFLPLIGAL 105
Score = 126 bits (269), Expect(3) = 2e-044
Identities = 64/136 (47%), Positives = 79/136 (58%)
Frame = -2 / +3
Query: 1492 GACEVQEAYIYHCCRLC*KGRFNSNYQKLC*GYTHWNYVRFYRFCAVYFTDNSRATVCNS 1313
G + +E Y +C R C R ++K GYT N VRF RFC V F DN R T +
Sbjct: 108 GTYQGKEVYHCYCRRFCQ*ERSGLYHKKFYRGYT*RNVVRFNRFCVVDFLDNVRDTFPIN 287
Query: 1312 THRHAPD*L*CLYMQ*WERYILSITV**CAKQFPCYICVGP*LPITY*VSLGRRRFKEVL 1133
RH *C +MQ*WE +IL * + FPC IC+ P*LP+ Y V +GRRR K+V
Sbjct: 288 ICRHGSYRF*CFHMQ*WE*FILPFAGW*FTQHFPCDICIRP*LPVPYRVPVGRRRCKKVS 467
Query: 1132 S*VGFFSSRKKGEN*K 1085
S VGF S+KKG+N*K
Sbjct: 468 SEVGFLDSKKKGKN*K 515
Score = 70.3 bits (147), Expect(3) = 4e-088
Identities = 25/33 (75%), Positives = 28/33 (84%)
Frame = -3 / +1
Query: 1596 NIHQFSWPEHCKNYLSRISSLGPRHPAFACKED 1498
NIH+FSWPEHCKNYLSRI +L PR+PAF ED
Sbjct: 1 NIHRFSWPEHCKNYLSRILTLSPRYPAFPSNED 99
Score = 62.0 bits (129), Expect(3) = 2e-062
Identities = 26/34 (76%), Positives = 29/34 (85%)
Frame = +2 / -1
Query: 1493 LWSSLHAKAGCLGPRLDILDK*FLQCSGQENWCI 1594
+WSSL KAG LG R++ILDK*FLQCSGQEN CI
Sbjct: 104 IWSSLLGKAGYLGLRVNILDK*FLQCSGQENRCI 3
Score = 58.3 bits (121), Expect(4) = 2e-032
Identities = 25/34 (73%), Positives = 29/34 (85%)
Frame = +1 / -3
Query: 1495 VVFFACESRMSWTKT*YP*QVILAMFRPRKLVYI 1596
+VF A +SR+SW K+*YP QVILAMFRPRK VYI
Sbjct: 102 LVFIARKSRVSWAKS*YPRQVILAMFRPRKPVYI 1
Score = 56.5 bits (117), Expect(3) = 2e-044
Identities = 24/33 (72%), Positives = 26/33 (78%)
Frame = -1 / +2
Query: 1595 IYTNFLGLNIARITCQGYQVLVQDILLSHAKKT 1497
IYT FLGLNIARITC+GY +L QD LL A KT
Sbjct: 2 IYTGFLGLNIARITCRGY*LLAQDTLLFRAMKT 100
Score = 53.8 bits (111), Expect(3) = 4e-088
Identities = 25/46 (54%), Positives = 28/46 (60%)
Frame = -3 / +2
Query: 1086 KQVIFEDSEHSSTYCLAFRVVNPNHLPPLKELQKLMRIQSLRCHAL 949
K F EHSST CLA RV +LPP +E KLM+ SLR HAL
Sbjct: 512 KTSYFGKPEHSSTSCLAVRVGTSKYLPPFEEPAKLMKNHSLRLHAL 649
Score = 53.8 bits (111), Expect(4) = 2e-032
Identities = 28/58 (48%), Positives = 37/58 (63%)
Frame = +1 / -3
Query: 1129 N*VLP*TFSSPTILNM*SVVMVQRKCNTGIAWHITRL*WIIYIAPTIAYKGIKVSREH 1302
+*+L TFSSP +L+M V+ V KC+TG A IT + I PTIAY+ IK+ R H
Sbjct: 471 H*ILSYTFSSPRVLDMGLVITV*CKCHTGSAG*ITSPQRVK*ITPTIAYESIKICRSH 298
Score = 53.3 bits (110), Expect(4) = 2e-032
Identities = 26/55 (47%), Positives = 34/55 (61%)
Frame = +1 / -3
Query: 1342 Q*SRQHKTCRT*HSSSACSLNRVSDNLN*IFLFNRVYSNDRYMLPALHRHLVVFF 1506
Q SRQHKTC T* CSL+R+ + + IFL R+Y N+ LP+L R L + F
Sbjct: 258 QGSRQHKTC*T*QRFFMCSLDRIFYDTDQIFLTGRIYGNNNDTLPSLDRCLNLVF 94
Score = 45.5 bits (93), Expect(3) = 2e-062
Identities = 24/47 (51%), Positives = 27/47 (57%)
Frame = +2 / -3
Query: 950 RA*QRSDWILINFCSSFKGGK*FGLTTLNARQYVEECSESSKMTCFS 1090
RA +RS+ IN S KGGK + TL ARQ VEECS K FS
Sbjct: 648 RACKRSE*FFINLAGSSKGGKYLDVPTLTARQDVEECSGFPK*LVFS 508
Score = 36.3 bits (73), Expect(3) = 2e-044
Identities = 17/37 (45%), Positives = 22/37 (59%)
Frame = -2 / +1
Query: 1060 TLFNILSCI*SG*SKSFASFEGAAKVDENPVTALSCS 950
TL NIL C *SG + F S ++DE +T L+CS
Sbjct: 538 TLLNILPCG*SGHIQIFTSL*RTCQIDEKSLTTLACS 648
Score = 30.4 bits (60), Expect(4) = 2e-032
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = +3 / -1
Query: 951 EHDNAVTGFSSTFAAPSKEANDLD*PL*MQDNMLKSV 1061
EH + V+ FSS + +E N PL* Q ML+SV
Sbjct: 647 EHASVVSDFSSIWQVLQREVNIWMCPL*PQGKMLRSV 537
>gb|AV931912.1|AV931912 AV931912 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp. vulgare
cDNA clone basd26l03 3', mRNA sequence
Length = 653
Score = 319 bits (691), Expect = 3e-086
Identities = 125/153 (81%), Positives = 143/153 (93%)
Frame = -3 / -1
Query: 1212 RVTFALDHNYRSHIEYRWGGEGLRKYLVKWASSVVERRGRTEKQVIFEDSEHSSTYCLAF 1033
+VT +D N++SHIEYRWGGEGLRKYLVKWA+SVVER+GR E+Q+IFEDSEHSSTYCLAF
Sbjct: 653 KVTHVIDRNHQSHIEYRWGGEGLRKYLVKWATSVVERKGRIERQMIFEDSEHSSTYCLAF 474
Query: 1032 RVVNPNHLPPLKELQKLMRIQSLRCHALYNHGATRLSVIPMHASRSQALRYLSIRWGIEL 853
+VVNPNHLPPLKEL+KLMRIQSLRC+ALYNH ATRLSV P+HASRSQA+RYL +RWGIEL
Sbjct: 473 KVVNPNHLPPLKELRKLMRIQSLRCNALYNHSATRLSVTPIHASRSQAIRYLFVRWGIEL 294
Query: 852 PNAVVIVGETGDSDYEELFGGLHKTVIVKGGFN 754
PN VVIVGE+GDSDYEEL GGLH+T+I+KG FN
Sbjct: 293 PNIVVIVGESGDSDYEELLGGLHRTIILKGDFN 195
Score = 231 bits (498), Expect = 1e-059
Identities = 101/158 (63%), Positives = 117/158 (74%)
Frame = +2 / +1
Query: 737 ILFAGVLNPPLTMTVLWRXXXXXXXXXXXXXXTMTTAFGNSMPQRIDKYLRA*DRDACIG 916
++ + +L P + VLWR TMTT FGNS+PQR +KYL A*+RDA IG
Sbjct: 178 VIVSAMLKSPFRIMVLWRPPSSSS*SESPLSPTMTTIFGNSIPQRTNKYLIA*ERDA*IG 357
Query: 917 ITDSLVAPWLYRA*QRSDWILINFCSSFKGGK*FGLTTLNARQYVEECSESSKMTCFSVL 1096
+TDSLVA WLY A QRSDWILINF +SF+GG+*FGLTTLNARQ VEECSESSK+ C S+L
Sbjct: 358 VTDSLVALWLYSALQRSDWILINFLNSFRGGR*FGLTTLNARQ*VEECSESSKIICLSIL 537
Query: 1097 PLLSTTEEAHLTKYFLKPSPPQRYSICDR*LWSNANVT 1210
P LSTTE AH T+YFL+PSPPQRYSICD * S VT
Sbjct: 538 PFLSTTEVAHFTRYFLRPSPPQRYSICD**FRSITCVT 651
Score = 194 bits (418), Expect = 1e-048
Identities = 90/152 (59%), Positives = 107/152 (70%)
Frame = -2 / -3
Query: 1207 YICVGP*LPITY*VSLGRRRFKEVLS*VGFFSSRKKGEN*KASHL*RFGTLFNILSCI*S 1028
Y C ITY*VSLGRRR K+V +G+FS RKKG+N*KA RF TLF +LSCI*S
Sbjct: 648 YTCNRSKSSITY*VSLGRRRSKKVSCEMGYFSGRKKGKN*KADDFRRFRTLFYLLSCI*S 469
Query: 1027 G*SKSFASFEGAAKVDENPVTALSCSV*PWRHQAICNSNACIAISGSKVFVYSLGHRVAK 848
G SKS AS EG ++DENPV +L C+V*P R+Q +CNS +C+ SG+KV V +LG RVAK
Sbjct: 468 GQSKSSASPEGVEEIDENPVASL*CAV*PQRYQTVCNSYSCVTFSGNKVLVCTLGDRVAK 289
Query: 847 CCGHCW*NW*F*LRGTVWRSPQDSHR*GWIQH 752
CGHCW* W*F L T SPQD + G +QH
Sbjct: 288 YCGHCW*KW*FRL*RTARGSPQDHNPEG*LQH 193
Score = 130 bits (278), Expect(2) = 5e-032
Identities = 69/107 (64%), Positives = 76/107 (71%)
Frame = -1 / -2
Query: 1070 KIRNTLQHIVLHLEWLIQIICLL*RSCKS**ESSHCVVMLCITMAPPGYL*FQCMHRDLR 891
KI+NTL IVLHL+W IQIICL *RS +**ESS VVM CIT A P L* M LR
Sbjct: 511 KIQNTLLPIVLHLKWSIQIICLP*RS*GN**ESSRFVVMRCITTALPDCL*LLFMRHVLR 332
Query: 890 L*GICLFAGA*SCQMLWSLLVKLVILITRNCLEVSTRQSSLRVDSTL 750
*G CL+AG *SCQ+LWSLLVK+VI I +NC VST S RV STL
Sbjct: 331 Q*GTCLYAGG*SCQILWSLLVKVVIPIMKNC*GVSTGP*S*RVTSTL 191
Score = 126 bits (269), Expect(2) = 5e-033
Identities = 59/109 (54%), Positives = 74/109 (67%)
Frame = +1 / +3
Query: 751 SVESTLNDDCLVETSKQFLVIRITSFTNNDHSIWQLYAPANRQIP*SLRSRCMHWNYR*P 930
+VE TL D VET QF +I IT+FTNNDH+IWQLY PA +Q+P LR+ M+ +YR
Sbjct: 192 NVEVTLQDYGPVETP*QFFIIGITTFTNNDHNIWQLYPPAYKQVPYCLRT*RMNRSYRQS 371
Query: 931 GGAMVIQSMTTQ*LDSHXXXXXXXXXXMIWINHSKCKTIC*RVFRIFKD 1077
G A+VIQ +TT+ LDSH MIWI+H KCKTI RVF IF++
Sbjct: 372 GSAVVIQRITTKRLDSHQFPQLLQGRQMIWIDHFKCKTIGRRVF*IFEN 518
Score = 111 bits (236), Expect = 2e-023
Identities = 54/86 (62%), Positives = 59/86 (68%)
Frame = +3 / +2
Query: 849 LATLCPSE*TNTLEPEIAMHALELQIAWWRHGYTEHDNAVTGFSSTFAAPSKEANDLD*P 1028
LATL PS T+TL PE H ELQ W R GYT H N TGFSS + PS EA+DLD*P
Sbjct: 290 LATLSPSVQTSTLLPENVTHE*ELQTVW*RCGYTAHYNEATGFSSISSTPSGEADDLD*P 469
Query: 1029 L*MQDNMLKSVPNLQR*LAFQFSPFF 1106
L*MQDN KSV NL++ AFQF PFF
Sbjct: 470 L*MQDNR*KSVLNLRKSSAFQFFPFF 547
Score = 36.3 bits (73), Expect(2) = 5e-033
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = +1 / +3
Query: 1135 VLP*TFSSPTILNM*SVVMVQRKCN 1209
+L *TFSSPTILNM* ++ + CN
Sbjct: 576 ILS*TFSSPTILNM*LMISIYYMCN 650
Score = 29.0 bits (57), Expect(2) = 5e-032
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = -1 / -2
Query: 1181 DHILSIVGEEKV*GS 1137
+HILSIVGEEKV* S
Sbjct: 622 NHILSIVGEEKV*ES 578
>gb|AV917170.1|AV917170 AV917170 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags8c04 5', mRNA sequence
Length = 630
Score = 301 bits (652), Expect(2) = 1e-082
Identities = 122/150 (81%), Positives = 139/150 (92%)
Frame = -3 / +2
Query: 1080 VIFEDSEHSSTYCLAFRVVNPNHLPPLKELQKLMRIQSLRCHALYNHGATRLSVIPMHAS 901
+IFEDSEHSSTYCLAF+VVNPNHLPPLKEL+KLMRIQSLRC+ALYNH ATRLSV P+HAS
Sbjct: 59 MIFEDSEHSSTYCLAFKVVNPNHLPPLKELRKLMRIQSLRCNALYNHSATRLSVTPIHAS 238
Query: 900 RSQALRYLSIRWGIELPNAVVIVGETGDSDYEELFGGLHKTVIVKGGFNTPANRIHTVRR 721
RSQA+RYL +RWGIELPN VVIVGE+GDSDYEEL GGLH+T+I+KG FN ANRIHTVRR
Sbjct: 239 RSQAIRYLFVRWGIELPNIVVIVGESGDSDYEELLGGLHRTIILKGDFNIAANRIHTVRR 418
Query: 720 YPLQDVVALDSSNIIGIEGFSTGDIRSAMQ 631
YPLQDVVALDSSNII ++G +T DI+SA++
Sbjct: 419 YPLQDVVALDSSNIIEVQGCTTEDIKSALR 508
Score = 224 bits (483), Expect(2) = 8e-060
Identities = 100/147 (68%), Positives = 111/147 (75%)
Frame = +2 / -1
Query: 638 ADLMSPVLNPSIPMIFELSRATTSCKGYLLTVWILFAGVLNPPLTMTVLWRXXXXXXXXX 817
ADLMS V+ P MI ELS ATTSCKGYLLTVWILFA +L P + VLWR
Sbjct: 501 ADLMSSVVQPWTSMILELSSATTSCKGYLLTVWILFAAMLKSPFRIMVLWRPPSSSS*SE 322
Query: 818 XXXXXTMTTAFGNSMPQRIDKYLRA*DRDACIGITDSLVAPWLYRA*QRSDWILINFCSS 997
TMTT FGNS+PQR +KYL A*+RDA IG+TDSLVA WLY A QRSDWILINF +S
Sbjct: 321 SPLSPTMTTIFGNSIPQRTNKYLIA*ERDA*IGVTDSLVALWLYSALQRSDWILINFLNS 142
Query: 998 FKGGK*FGLTTLNARQYVEECSESSKM 1078
F+GG+*FGLTTLNARQ VEECSESSK+
Sbjct: 141 FRGGR*FGLTTLNARQ*VEECSESSKI 61
Score = 179 bits (386), Expect = 4e-044
Identities = 78/147 (53%), Positives = 103/147 (70%)
Frame = -2 / +1
Query: 1069 RFGTLFNILSCI*SG*SKSFASFEGAAKVDENPVTALSCSV*PWRHQAICNSNACIAISG 890
RF TLF +LSCI*SG SKS AS EG ++DENPV +L C+V*P R+Q +CNS +C+ SG
Sbjct: 70 RFRTLFYLLSCI*SGQSKSSASPEGVEEIDENPVASL*CAV*PQRYQTVCNSYSCVTFSG 249
Query: 889 SKVFVYSLGHRVAKCCGHCW*NW*F*LRGTVWRSPQDSHR*GWIQHSCE*DPYGQKVPFT 710
+KV V +LG RVAK CGHCW* W*F L T SPQD + G +QH + +P+ +++P
Sbjct: 250 NKVLVCTLGDRVAKYCGHCW*KW*FRL*RTARGSPQDHNPEG*LQHCRKQNPHSEEIPLA 429
Query: 709 GCCCS**LKYHWN*GIQHW*HQVCYAT 629
GC C+ L+YH + G+ + HQVC A+
Sbjct: 430 GCRCTGQLQYH*SPGLHYRGHQVCPAS 510
Score = 146 bits (313), Expect = 4e-034
Identities = 72/146 (49%), Positives = 95/146 (65%)
Frame = +1 / -3
Query: 640 RPDVTSAESLNSNDI*AIKSNNIL*RVPSDRMDPIRRSVESTLNDDCLVETSKQFLVIRI 819
R DV + +L+ NDI A++ N+IL V +D + +VE TL D VET QF +I I
Sbjct: 499 RLDVLCSATLDFNDIGAVQCNDILQGVSPHCVDSVCGNVEVTLQDYGPVETP*QFFIIGI 320
Query: 820 TSFTNNDHSIWQLYAPANRQIP*SLRSRCMHWNYR*PGGAMVIQSMTTQ*LDSHXXXXXX 999
T+FTNNDH+IWQLY PA +Q+P LR+ M+ +YR G A+VIQ +TT+ LDSH
Sbjct: 319 TTFTNNDHNIWQLYPPAYKQVPYCLRT*RMNRSYRQSGSAVVIQRITTKRLDSHQFPQLL 140
Query: 1000 XXXXMIWINHSKCKTIC*RVFRIFKD 1077
MIWI+H KCKTI RVF IF++
Sbjct: 139 QGRQMIWIDHFKCKTIGRRVF*IFEN 62
Score = 134 bits (287), Expect = 2e-030
Identities = 78/146 (53%), Positives = 88/146 (60%)
Frame = -1 / +3
Query: 1070 KIRNTLQHIVLHLEWLIQIICLL*RSCKS**ESSHCVVMLCITMAPPGYL*FQCMHRDLR 891
KI+NTL IVLHL+W IQIICL *RS +**ESS VVM CIT A P L* M LR
Sbjct: 69 KIQNTLLPIVLHLKWSIQIICLP*RS*GN**ESSRFVVMRCITTALPDCL*LLFMRHVLR 248
Query: 890 L*GICLFAGA*SCQMLWSLLVKLVILITRNCLEVSTRQSSLRVDSTLLRIGSIRSEGTLY 711
*G CL+AG *SCQ+LWSLLVK+VI I +NC VST S RV STL + S + T
Sbjct: 249 Q*GTCLYAGG*SCQILWSLLVKVVIPIMKNC*GVSTGP*S*RVTSTLPQTESTQ*GDTPC 428
Query: 710 RMXXXXXXXXXXXLRDSALVTSGLLC 633
RM R + TS L C
Sbjct: 429 RMSLHWTAPISLKSRVALQRTSSLPC 506
Score = 96.4 bits (204), Expect(2) = 1e-024
Identities = 47/76 (61%), Positives = 52/76 (68%)
Frame = +3 / -2
Query: 849 LATLCPSE*TNTLEPEIAMHALELQIAWWRHGYTEHDNAVTGFSSTFAAPSKEANDLD*P 1028
LATL PS T+TL PE H ELQ W R GYT H N TGFSS + PS EA+DLD*P
Sbjct: 290 LATLSPSVQTSTLLPENVTHE*ELQTVW*RCGYTAHYNEATGFSSISSTPSGEADDLD*P 111
Query: 1029 L*MQDNMLKSVPNLQR 1076
L*MQDN KSV NL++
Sbjct: 110 L*MQDNR*KSVLNLRK 63
Score = 37.7 bits (76), Expect(2) = 1e-024
Identities = 22/51 (43%), Positives = 26/51 (50%)
Frame = +3 / -2
Query: 639 QT*CHQC*IPQFQ*YLSYQEQQHPVKGTF*PYGSYSQEC*IHP*R*LSCGD 791
QT*C P Q*Y S Q+HP +G G ++C* HP SCGD
Sbjct: 500 QT*CPL*CNPGLQ*YWSCPVQRHPARGISSLCGFCLRQC*SHPSGLWSCGD 348
Score = 28.1 bits (55), Expect(2) = 8e-060
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +2 / -3
Query: 1085 FSVLPLLSTTEEAHLTK 1135
F LP LSTTE AH T+
Sbjct: 52 FQXLPXLSTTEVAHFTR 2
Score = 27.2 bits (53), Expect(2) = 1e-082
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = -3 / +3
Query: 1134 LVKWASSVVERRG 1096
LVKWA+SVVE +G
Sbjct: 3 LVKWATSVVEXKG 41
>gb|BU968420.1|BU968420 HB07H08r BC Hordeum vulgare subsp. vulgare cDNA clone HB07H08
5-PRIME, mRNA sequence
Length = 533
Score = 177 bits (380), Expect(3) = 1e-068
Identities = 71/107 (66%), Positives = 89/107 (83%)
Frame = -3 / +1
Query: 1494 KVPVKCRKHISIIAVDSVKKEDLIQIIRNSVEATRTGTMSGSTGFVLSTSLTIAELQSVI 1315
K P+K RK I +IAVDS K+DL+ II+NS+EAT T+SGSTGFVLSTSLT++E+ S++
Sbjct: 211 KAPIKGRKCIIVIAVDSASKKDLVCIIKNSIEATHKETLSGSTGFVLSTSLTMSEIHSLL 390
Query: 1314 VRTGMLPTDFDAFICNSGSDIYYPLQSSDVPSNSRVTFALDHNYRSH 1174
+ GM PTDFDAFICNSGSD++YPL++ D PS SRVTFALD NY+SH
Sbjct: 391 ISAGMAPTDFDAFICNSGSDLFYPLRAGDSPSTSRVTFALDRNYQSH 531
Score = 121 bits (259), Expect(3) = 2e-048
Identities = 64/108 (59%), Positives = 73/108 (67%)
Frame = +2 / -1
Query: 1172 ICDR*LWSNANVTRELLGTSLDCNG*YISLPLLHIKASKSVGSMPVRTITDCSSAIVSEV 1351
I D *L SNANVTRE+LG S G* SLPLLH+KASKSVG+MP +C S IV EV
Sbjct: 533 IWDW*LRSNANVTREVLGESPARKG*NKSLPLLHMKASKSVGAMPADINRECISDIVKEV 354
Query: 1352 DSTKPVEPDIVPVRVASTEFLII*IKSSFLTESTAMIDICFLHFTGTL 1495
D+TKPVEPD V + VAS EF +I +S L ESTA+ I FL G L
Sbjct: 353 DNTKPVEPDNVSLCVASIEFFMIQTRSFLLAESTAITMIHFLPLIGAL 210
Score = 92.3 bits (195), Expect(3) = 2e-033
Identities = 47/107 (43%), Positives = 57/107 (53%)
Frame = -2 / +3
Query: 1492 GACEVQEAYIYHCCRLC*KGRFNSNYQKLC*GYTHWNYVRFYRFCAVYFTDNSRATVCNS 1313
G + +E Y +C R C R ++K GYT N VRF RFC V F DN R T +
Sbjct: 213 GTYQGKEVYHCYCRRFCQ*ERSGLYHKKFYRGYT*RNVVRFNRFCVVDFLDNVRDTFPIN 392
Query: 1312 THRHAPD*L*CLYMQ*WERYILSITV**CAKQFPCYICVGP*LPITY 1172
RH *C +MQ*WE +IL * K FPC IC+ P*LP+ Y
Sbjct: 393 ICRHGSYRF*CFHMQ*WE*FILPFAGW*FTKHFPCDICIRP*LPVPY 533
Score = 68.0 bits (142), Expect(3) = 1e-068
Identities = 24/34 (70%), Positives = 28/34 (82%)
Frame = -3 / +1
Query: 1599 KNIHQFSWPEHCKNYLSRISSLGPRHPAFACKED 1498
+ IH+FSWPEHCKNYLSRI +L PR+PAF ED
Sbjct: 103 EKIHRFSWPEHCKNYLSRILTLSPRYPAFPSNED 204
Score = 64.8 bits (135), Expect(3) = 2e-048
Identities = 27/35 (77%), Positives = 30/35 (85%)
Frame = +2 / -1
Query: 1493 LWSSLHAKAGCLGPRLDILDK*FLQCSGQENWCIF 1597
+WSSL KAG LG R++ILDK*FLQCSGQEN CIF
Sbjct: 209 IWSSLLGKAGYLGLRVNILDK*FLQCSGQENRCIF 105
Score = 59.3 bits (123), Expect(4) = 7e-036
Identities = 25/35 (71%), Positives = 29/35 (82%)
Frame = +1 / -3
Query: 1495 VVFFACESRMSWTKT*YP*QVILAMFRPRKLVYIF 1599
+VF A +SR+SW K+*YP QVILAMFRPRK VY F
Sbjct: 207 LVFIARKSRVSWAKS*YPRQVILAMFRPRKPVYFF 103
Score = 55.6 bits (115), Expect(3) = 2e-033
Identities = 24/34 (70%), Positives = 26/34 (76%)
Frame = -1 / +2
Query: 1598 KIYTNFLGLNIARITCQGYQVLVQDILLSHAKKT 1497
K YT FLGLNIARITC+GY +L QD LL A KT
Sbjct: 104 KKYTGFLGLNIARITCRGY*LLAQDTLLFRAMKT 205
Score = 55.6 bits (115), Expect(3) = 1e-068
Identities = 23/38 (60%), Positives = 27/38 (71%)
Frame = -2 / +2
Query: 1702 GLLVDPHDQHAIADALYKMLSEKQFCV*MSRKWIEKYT 1589
G VDPHDQHAIADALYK+LS+KQ ++KYT
Sbjct: 2 GTRVDPHDQHAIADALYKLLSDKQLWSRCRENGLKKYT 115
Score = 54.7 bits (113), Expect(4) = 1e-025
Identities = 23/34 (67%), Positives = 26/34 (76%)
Frame = +3 / -2
Query: 1497 GLLCMRKQDVLDQDLISLTSNSCNVQAKKIGVYF 1598
GL C KQ +L +LIS TSNSCNVQAKK GV+F
Sbjct: 205 GLHCSEKQGILG*ELISSTSNSCNVQAKKTGVFF 104
Score = 53.3 bits (110), Expect(4) = 7e-036
Identities = 26/55 (47%), Positives = 34/55 (61%)
Frame = +1 / -3
Query: 1342 Q*SRQHKTCRT*HSSSACSLNRVSDNLN*IFLFNRVYSNDRYMLPALHRHLVVFF 1506
Q SRQHKTC T* CSL+R+ + + IFL R+Y N+ LP+L R L + F
Sbjct: 363 QGSRQHKTC*T*QRFFMCSLDRIFYDTDQIFLTGRIYGNNNDTLPSLDRCLNLVF 199
Score = 51.0 bits (105), Expect(4) = 7e-036
Identities = 20/39 (51%), Positives = 24/39 (61%)
Frame = +3 / -2
Query: 1173 YVIGSYGPTQM*HGNCLAHH*TVMDNIYRSHYCI*RHQS 1289
Y G+YG QM HG CL +H I SHYCI*+HQ+
Sbjct: 532 YGTGNYGLMQMSHGKCLVNHQPAKGKINHSHYCI*KHQN 416
Score = 46.4 bits (95), Expect(3) = 2e-048
Identities = 20/34 (58%), Positives = 23/34 (67%)
Frame = +2 / -2
Query: 1592 IFFNPFSRHLDTKLLFRKHLIEGICNCMLIMGIN 1693
+FF P +LL RK LIE ICNCMLI+GIN
Sbjct: 112 VFFQPIFSTS*PELLVRKKLIECICNCMLIVGIN 11
Score = 44.1 bits (90), Expect(4) = 7e-036
Identities = 23/38 (60%), Positives = 24/38 (63%)
Frame = +3 / -3
Query: 1590 VYFSIHFLDI*TQNCFSESIL*RASAIAC*SWGSTRRP 1703
VYF F Q+C SE L* ASAIAC*SWGST P
Sbjct: 114 VYFFSPFSLHLDQSCLSERSL*SASAIAC*SWGSTLVP 1
Score = 43.2 bits (88), Expect(4) = 1e-025
Identities = 20/40 (50%), Positives = 25/40 (62%)
Frame = +1 / -3
Query: 1183 VVMVQRKCNTGIAWHITRL*WIIYIAPTIAYKGIKVSREH 1302
V+ V KC+TG AW IT + I PTIAY+ IK+ R H
Sbjct: 522 VITV*CKCHTGSAW*ITSPQRVK*ITPTIAYESIKICRSH 403
Score = 40.9 bits (83), Expect(4) = 1e-025
Identities = 18/33 (54%), Positives = 21/33 (63%)
Frame = +1 / -1
Query: 1594 IFQSIFSTSRHKTAFQKASYRGHLQLHADHGDQ 1692
IF + F + A QK +YR HLQLHAD GDQ
Sbjct: 110 IFSAHFLYILTRVACQKEAYRVHLQLHADRGDQ 12
Score = 34.1 bits (68), Expect(3) = 2e-033
Identities = 19/37 (51%), Positives = 21/37 (56%)
Frame = -3 / +3
Query: 1692 LIPMISMQLQMPSIRCFLKSSFVSRCRENGLKNIHQF 1582
LIP ISMQLQM SI FL S+ + G KN F
Sbjct: 12 LIPTISMQLQMHSISFFLTSNSGQDVEKMG*KNTPVF 122
Score = 33.6 bits (67), Expect(4) = 1e-025
Identities = 22/45 (48%), Positives = 29/45 (64%)
Frame = +3 / -2
Query: 1341 SVK*TAQNL*NLT*FQCV*PQQSF**FELNLPF*QSLQQ**IYAS 1475
S K T QNL NLT F V*P+ +F *+ +L + Q+L+Q* Y S
Sbjct: 364 SRKSTTQNLLNLTTFLYV*PR*NFL*YRPDLSYWQNLRQ*Q*YTS 230
>gb|CK123660.1|CK123660 BES1824105a02 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010A025 5-PRIME, mRNA sequence
Length = 759
Score = 139 bits (298), Expect(4) = 6e-067
Identities = 57/65 (87%), Positives = 61/65 (93%)
Frame = -2 / +1
Query: 1825 FCKCCYFEQFGVTLIEAAMHGLPVIATKNGAPVEIYQVLENGLLVDPHDQHAIADALYKM 1646
F YFEQFGVTLIEAAMHGLPVIATKNGAPVEI+QVL+NGLLVDPHDQHAIADALYK+
Sbjct: 196 FVNVAYFEQFGVTLIEAAMHGLPVIATKNGAPVEIHQVLDNGLLVDPHDQHAIADALYKL 375
Query: 1645 LSEKQ 1631
LS+KQ
Sbjct: 376 LSDKQ 390
Score = 122 bits (262), Expect(3) = 2e-053
Identities = 55/67 (82%), Positives = 56/67 (83%)
Frame = +3 / -2
Query: 1626 QNCFSESIL*RASAIAC*SWGSTRRPFSRT**ISTGAPFFVAITGKPCMAASIKVTPNCS 1805
Q+C SE L* ASAIAC*SWGSTRRP S T *ISTGAPFFVAITGKPCMAASIKVTPNCS
Sbjct: 395 QSCLSERSL*SASAIAC*SWGSTRRPLSNTW*ISTGAPFFVAITGKPCMAASIKVTPNCS 216
Query: 1806 K*QHLQK 1826
K* K
Sbjct: 215 K*ATFTK 195
Score = 115 bits (246), Expect(3) = 2e-044
Identities = 48/77 (62%), Positives = 58/77 (75%)
Frame = +2 / -1
Query: 1598 FNPFSRHLDTKLLFRKHLIEGICNCMLIMGINKETIFQNLINFNRSPIFCCNNRQTVHGS 1777
F P +LL RK LIE ICNCMLI+GINKET+ Q+L+NF RS IFCCN R T+HGS
Sbjct: 423 FQPIFSTS*PELLVRKKLIECICNCMLIVGINKETVVQHLVNFYRSSIFCCNYR*TMHGS 244
Query: 1778 LYQGDTKLFKITTFTKA 1828
LYQGDT+LFK++ K+
Sbjct: 243 LYQGDTELFKVSYIYKS 193
Score = 102 bits (217), Expect(2) = 2e-021
Identities = 45/77 (58%), Positives = 52/77 (67%)
Frame = +1 / -3
Query: 1579 RKLVYIFQSIFSTSRHKTAFQKASYRGHLQLHADHGDQQGDHFPEPDKFQQEPHFLLQ*Q 1758
+K F + F + A QK +YR HLQLHAD GDQQGD P P +F QE HFLLQ Q
Sbjct: 442 KKTGVYFSAHFLYILTRVACQKEAYRVHLQLHADRGDQQGDRCPTPGEFLQELHFLLQLQ 263
Query: 1759 ANRAWQPLSR*HQIVQN 1809
N AWQPLSR*H+IVQ+
Sbjct: 262 VNHAWQPLSR*HRIVQS 212
Score = 92.7 bits (196), Expect(4) = 6e-067
Identities = 34/42 (80%), Positives = 37/42 (88%)
Frame = -3 / +1
Query: 1623 SRCRENGLKNIHQFSWPEHCKNYLSRISSLGPRHPAFACKED 1498
SRCRENGLKNIH+FSWPEHCKNYLSRI +L PR+PAF ED
Sbjct: 397 SRCRENGLKNIHRFSWPEHCKNYLSRILTLSPRYPAFPSNED 522
Score = 85.4 bits (180), Expect(3) = 2e-053
Identities = 36/53 (67%), Positives = 41/53 (77%)
Frame = +2 / -2
Query: 1493 LWSSLHAKAGCLGPRLDILDK*FLQCSGQENWCIFFNPFSRHLDTKLLFRKHL 1651
+WSSL KAG LG R++ILDK*FLQCSGQEN CIFF+PFS HLD L + L
Sbjct: 527 IWSSLLGKAGYLGLRVNILDK*FLQCSGQENRCIFFSPFSLHLDQSCLSERSL 369
Score = 73.5 bits (154), Expect(3) = 2e-044
Identities = 32/42 (76%), Positives = 36/42 (85%)
Frame = +1 / -1
Query: 1495 VVFFACESRMSWTKT*YP*QVILAMFRPRKLVYIFQSIFSTS 1620
+VF A +SR+SW K+*YP QVILAMFRPRK VYIFQ IFSTS
Sbjct: 525 LVFIARKSRVSWAKS*YPRQVILAMFRPRKPVYIFQPIFSTS 400
Score = 70.3 bits (147), Expect(4) = 3e-037
Identities = 31/41 (75%), Positives = 33/41 (80%)
Frame = -1 / +2
Query: 1619 DVEKMD*KIYTNFLGLNIARITCQGYQVLVQDILLSHAKKT 1497
DVEKM *KIYT FLGLNIARITC+GY +L QD LL A KT
Sbjct: 401 DVEKMG*KIYTGFLGLNIARITCRGY*LLAQDTLLFRAMKT 523
Score = 66.6 bits (139), Expect(4) = 3e-037
Identities = 25/36 (69%), Positives = 26/36 (72%)
Frame = -1 / +3
Query: 1811 LF*TIWCHLDRGCHARFACYCNKKWGSC*NLSGSGK 1704
L *TI CHLDRGCHA F C CNKKW SC N G G+
Sbjct: 210 LL*TIRCHLDRGCHAWFTCNCNKKWSSCRNSPGVGQ 317
Score = 52.4 bits (108), Expect(4) = 6e-067
Identities = 22/32 (68%), Positives = 27/32 (84%)
Frame = -3 / +2
Query: 1437 KEDLIQIIRNSVEATRTGTMSGSTGFVLSTSL 1342
K+DL+ II+NS+EAT T+SGSTGFV STSL
Sbjct: 587 KKDLVCIIKNSIEATHKETLSGSTGFVXSTSL 682
Score = 45.1 bits (92), Expect(4) = 3e-037
Identities = 21/31 (67%), Positives = 22/31 (70%)
Frame = -3 / +2
Query: 1722 FIRFWKMVSLLIPMISMQLQMPSIRCFLKSS 1630
F R W VSLLIP ISMQLQM SI FL S+
Sbjct: 299 FTRCWTTVSLLIPTISMQLQMHSISFFLTSN 391
Score = 41.4 bits (84), Expect(3) = 2e-053
Identities = 19/31 (61%), Positives = 22/31 (70%)
Frame = +2 / -1
Query: 1346 EVDSTKPVEPDIVPVRVASTEFLII*IKSSF 1438
EVD TKPVEPD V + VAS EF +I +S F
Sbjct: 678 EVDXTKPVEPDNVSLCVASIEFFMIQTRSFF 586
Score = 30.4 bits (60), Expect(4) = 3e-037
Identities = 15/31 (48%), Positives = 17/31 (54%)
Frame = -2 / +1
Query: 1438 KGRFNSNYQKLC*GYTHWNYVRFYRFCAVYF 1346
K R ++K GYT N VRF RFC V F
Sbjct: 586 KKRSGLYHKKFYRGYT*RNVVRFNRFCXVDF 678
Score = 29.9 bits (59), Expect(3) = 2e-044
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +1 / -3
Query: 1348 SRQHKTCRT*HSSSACSLNRVSDNLN*IF 1434
SR HKTC T* CSL+R+ + + IF
Sbjct: 676 SRXHKTC*T*QRFFMCSLDRIFYDTDQIF 590
Score = 28.6 bits (56), Expect(4) = 6e-067
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = -3 / +1
Query: 1494 KVPVKCRKHISIIAVDSVKKE 1432
K P+K RK I +IAVDS K+
Sbjct: 529 KAPIKGRKCIIVIAVDSAXKK 591
Score = 24.9 bits (48), Expect(2) = 2e-021
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +3 / -2
Query: 1347 K*TAQNL*NLT*FQCV*PQQSF**FELNL 1433
K T QNL NLT F V*P+ +F *+ +L
Sbjct: 677 KSTXQNLLNLTTFLYV*PR*NFL*YRPDL 591
>gb|CA011510.1|CA011510 HT05E02u HT Hordeum vulgare subsp. vulgare cDNA clone HT05E02
3-PRIME, mRNA sequence
Length = 493
Score = 250 bits (540), Expect = 2e-065
Identities = 100/123 (81%), Positives = 113/123 (91%)
Frame = -3 / -1
Query: 999 KELQKLMRIQSLRCHALYNHGATRLSVIPMHASRSQALRYLSIRWGIELPNAVVIVGETG 820
KELQKLMRIQSLRCHALYNH ATRLSVIP+HASRSQALRYLS+RWGIEL N V++VGE+G
Sbjct: 493 KELQKLMRIQSLRCHALYNHSATRLSVIPIHASRSQALRYLSVRWGIELRNVVILVGESG 314
Query: 819 DSDYEELFGGLHKTVIVKGGFNTPANRIHTVRRYPLQDVVALDSSNIIGIEGFSTGDIRS 640
DSDYEELFGGLHKT+++KG FNTPANRIHTVRRYPLQDV+ALD SNIIG+EG ST D+
Sbjct: 313 DSDYEELFGGLHKTIVLKGEFNTPANRIHTVRRYPLQDVIALDCSNIIGVEGCSTDDLTP 134
Query: 639 AMQ 631
++
Sbjct: 133 TLK 125
Score = 162 bits (348), Expect = 6e-039
Identities = 76/116 (65%), Positives = 79/116 (68%)
Frame = +2 / +3
Query: 650 SPVLNPSIPMIFELSRATTSCKGYLLTVWILFAGVLNPPLTMTVLWRXXXXXXXXXXXXX 829
S VL PS PM+FE S A TSC GY LTVWILFAGVLN P VL R
Sbjct: 144 SSVLQPSTPMMFEQSSAMTSCSGYRLTVWILFAGVLNSPFRTIVL*RPPNSSS*SESPLS 323
Query: 830 XTMTTAFGNSMPQRIDKYLRA*DRDACIGITDSLVAPWLYRA*QRSDWILINFCSS 997
T T F NSMPQR D+YLRA +RDA IGITDSLVA WL RA*QRSDWILINFCSS
Sbjct: 324 PTRITTFRNSMPQRTDRYLRAWERDA*IGITDSLVALWL*RA*QRSDWILINFCSS 491
Score = 141 bits (302), Expect = 1e-032
Identities = 63/117 (53%), Positives = 83/117 (70%)
Frame = +1 / +2
Query: 631 LHSRPDVTSAESLNSNDI*AIKSNNIL*RVPSDRMDPIRRSVESTLNDDCLVETSKQFLV 810
L SR V A +L+ +D+ AI+ +++L RVP DR+D + VE L DD LV+ SKQ V
Sbjct: 125 LQSRGQVVGAAALDPDDVRAIECDDVLQRVPPDRVDSVCGCVELALQDDRLVKASKQLFV 304
Query: 811 IRITSFTNNDHSIWQLYAPANRQIP*SLRSRCMHWNYR*PGGAMVIQSMTTQ*LDSH 981
I I +FT+ +H + QLYAP NRQ+P*SL + CM+WNYR*PG +VI+SMT *LDSH
Sbjct: 305 I*IATFTDQNHDVSQLYAPTNRQVP*SLGA*CMNWNYR*PGSTVVIKSMTA**LDSH 475
Score = 122 bits (260), Expect = 8e-027
Identities = 56/94 (59%), Positives = 66/94 (70%)
Frame = -2 / -3
Query: 997 GAAKVDENPVTALSCSV*PWRHQAICNSNACIAISGSKVFVYSLGHRVAKCCGHCW*NW* 818
GAA+VDENPVT LSCS+*P +QAICNSN+CI + GSKV V SLGHRVAK * W
Sbjct: 491 GAAEVDENPVTTLSCSL*PQCYQAICNSNSCITLPGSKVPVCSLGHRVAKRRDSGR*KWR 312
Query: 817 F*LRGTVWRSPQDSHR*GWIQHSCE*DPYGQKVP 716
F LR VWR QD G +QH+ + +P+GQ VP
Sbjct: 311 FRLRRAVWRPSQDDRPEGRVQHTRKQNPHGQAVP 210
Score = 111 bits (237), Expect = 1e-023
Identities = 61/121 (50%), Positives = 70/121 (57%)
Frame = -1 / -2
Query: 998 RSCKS**ESSHCVVMLCITMAPPGYL*FQCMHRDLRL*GICLFAGA*SCQMLWSLLVKLV 819
RSC+S**ESSH VML IT PGYL*FQ MH RL*G CLF GA*SC+ VK+
Sbjct: 492 RSCRS**ESSHYAVMLFITTVLPGYL*FQFMHHAPRL*GTCLFVGA*SCETS*FWSVKVA 313
Query: 818 ILITRNCLEVSTRQSSLRVDSTLLRIGSIRSEGTLYRMXXXXXXXXXXXLRDSALVTSGL 639
I IT++CLE TR+SS R ST + S RS GT + R +A T L
Sbjct: 312 IQITKSCLEAFTRRSS*RASSTHPQTESTRSGGTRCKTSSHSIARTSSGSRAAAPTT*PL 133
Query: 638 L 636
L
Sbjct: 132 L 130
>gb|BU975604.1|BU975604 HB31K24r BC Hordeum vulgare subsp. vulgare cDNA clone HB31K24
5-PRIME, mRNA sequence
Length = 563
Score = 87.2 bits (184), Expect(4) = 3e-057
Identities = 33/42 (78%), Positives = 36/42 (85%)
Frame = -3 / +3
Query: 1623 SRCRENGLKNIHQFSWPEHCKNYLSRISSLGPRHPAFACKED 1498
SRCRENGLKNIHQFSWPEHCKN+LSRI +LG R PA KE+
Sbjct: 339 SRCRENGLKNIHQFSWPEHCKNHLSRILTLGMRSPAVGSKEE 464
Score = 76.7 bits (161), Expect(4) = 3e-057
Identities = 32/38 (84%), Positives = 34/38 (89%)
Frame = -2 / +2
Query: 1825 FCKCCYFEQFGVTLIEAAMHGLPVIATKNGAPVEIYQV 1712
F YFEQFGVTLIEAAM+GLPVIATKNGAPVEI+QV
Sbjct: 29 FVNVAYFEQFGVTLIEAAMNGLPVIATKNGAPVEIHQV 142
Score = 73.9 bits (155), Expect(4) = 5e-038
Identities = 33/53 (62%), Positives = 38/53 (71%)
Frame = +2 / -2
Query: 1493 LWSSLHAKAGCLGPRLDILDK*FLQCSGQENWCIFFNPFSRHLDTKLLFRKHL 1651
L SSL AG L PR++ILD+*FLQCSGQENW IFF+PFS HLD + L
Sbjct: 469 LLSSLLPTAGDLIPRVNILDR*FLQCSGQENW*IFFSPFSLHLDQSCFSERSL 311
Score = 70.7 bits (148), Expect(4) = 3e-030
Identities = 31/40 (77%), Positives = 35/40 (87%)
Frame = -1 / +1
Query: 1619 DVEKMD*KIYTNFLGLNIARITCQGYQVLVQDILLSHAKK 1500
D EKMD*KI+TNF GLNIARITCQGY +LV D+LLS AK+
Sbjct: 343 DAEKMD*KIFTNFPGLNIARITCQGY*LLV*DLLLSVAKR 462
Score = 69.3 bits (145), Expect(4) = 5e-038
Identities = 32/38 (84%), Positives = 33/38 (86%)
Frame = +3 / -3
Query: 1713 T**ISTGAPFFVAITGKPCMAASIKVTPNCSK*QHLQK 1826
T* ISTGAPFFVAITGKP +AASIKVTPNCSK* L K
Sbjct: 141 T*WISTGAPFFVAITGKPFIAASIKVTPNCSK*ATLTK 28
Score = 64.3 bits (134), Expect(4) = 3e-057
Identities = 26/31 (83%), Positives = 29/31 (93%)
Frame = -2 / +3
Query: 1723 IYQVLENGLLVDPHDQHAIADALYKMLSEKQ 1631
+ QVL NGLLVDPHDQ+AIADALYK+LSEKQ
Sbjct: 240 LMQVLNNGLLVDPHDQNAIADALYKLLSEKQ 332
Score = 61.6 bits (128), Expect(4) = 1e-031
Identities = 23/38 (60%), Positives = 30/38 (78%)
Frame = +2 / -2
Query: 1715 LINFNRSPIFCCNNRQTVHGSLYQGDTKLFKITTFTKA 1828
L++FNRS IFC NNRQT+H LYQG+ KLF+I+ K+
Sbjct: 139 LMDFNRSSIFCSNNRQTIHSGLYQGNAKLFEISHVDKS 26
Score = 61.6 bits (128), Expect(4) = 1e-031
Identities = 25/42 (59%), Positives = 33/42 (78%)
Frame = +3 / -3
Query: 1503 LCMRKQDVLDQDLISLTSNSCNVQAKKIGVYFSIHFLDI*TQ 1628
LC R+Q++ Q+ ISLT +SCNVQA+KIG YF +HFL I T+
Sbjct: 459 LCYRQQEISYQESISLTGDSCNVQARKIGEYFLVHFLCILTK 334
Score = 58.8 bits (122), Expect(4) = 3e-030
Identities = 23/33 (69%), Positives = 25/33 (75%)
Frame = -1 / +1
Query: 1811 LF*TIWCHLDRGCHARFACYCNKKWGSC*NLSG 1713
LF TIW +LDRG + FACYC KKW SC*N SG
Sbjct: 43 LFRTIWRYLDRGRYEWFACYCYKKWSSC*NPSG 141
Score = 52.4 bits (108), Expect(4) = 3e-057
Identities = 20/35 (57%), Positives = 28/35 (80%)
Frame = -3 / +3
Query: 1506 KEDHKVPVKCRKHISIIAVDSVKKEDLIQIIRNSV 1402
+E K P+ RKHI +I+VDSV KEDL++IIRN++
Sbjct: 459 EERSKAPISGRKHIIVISVDSVNKEDLVRIIRNAI 563
Score = 38.6 bits (78), Expect(4) = 5e-038
Identities = 19/30 (63%), Positives = 21/30 (70%)
Frame = +3 / -2
Query: 1626 QNCFSESIL*RASAIAC*SWGSTRRPFSRT 1715
Q+CFSE L ASA+A *S GSTRRP T
Sbjct: 337 QSCFSERSLYSASAMAF*SCGSTRRPLLST 248
Score = 37.7 bits (76), Expect(4) = 1e-031
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +2 / -1
Query: 1628 KLLFRKHLIEGICNCMLIMGINKETIFQNL 1717
KLL K I+ ICN +LIM I+KETI ++L
Sbjct: 335 KLLLGKKFIQCICNGILIMWIDKETIVEHL 246
Score = 33.1 bits (66), Expect(4) = 5e-038
Identities = 16/29 (55%), Positives = 19/29 (65%)
Frame = +2 / -2
Query: 1409 FLII*IKSSFLTESTAMIDICFLHFTGTL 1495
FL+I +SS LTEST + ICFL G L
Sbjct: 556 FLMIRTRSSLLTESTEITMICFLPDIGAL 470
Score = 32.7 bits (65), Expect(4) = 1e-031
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = +1 / -1
Query: 1402 NRVSDNLN*IFLFNRVYSNDRYMLPA 1479
N +SD+ +*I L NRVY N+ MLP+
Sbjct: 563 NCISDDPH*ILLVNRVYRNNNDMLPS 486
Score = 29.5 bits (58), Expect(4) = 3e-030
Identities = 11/23 (47%), Positives = 18/23 (78%)
Frame = -2 / +2
Query: 1477 QEAYIYHCCRLC*KGRFNSNYQK 1409
+EAY + CRLC*+G ++++QK
Sbjct: 488 KEAYHCYFCRLC*QGGSSADHQK 556
Score = 29.5 bits (58), Expect(4) = 3e-030
Identities = 15/26 (57%), Positives = 17/26 (65%)
Frame = -3 / +1
Query: 1704 MVSLLIPMISMQLQMPSIRCFLKSSF 1627
MVSL I MI M LQM I F +S+F
Sbjct: 259 MVSLSIHMIRMPLQMHCINFFPRSNF 336
>gb|BQ767300.1|BQ767300 EBro08_SQ008_C18_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ008_C18 5', mRNA sequence
Length = 629
Score = 218 bits (470), Expect = 9e-056
Identities = 83/160 (51%), Positives = 119/160 (74%)
Frame = -3 / +1
Query: 1107 ERRGRTEKQVIFEDSEHSSTYCLAFRVVNPNHLPPLKELQKLMRIQSLRCHALYNHGATR 928
E+ + ++ + ED E SSTYC++F+V N +PP+K+L+K MRIQ+LRCH LY+H ++
Sbjct: 19 EKNSESGQEAVTEDDECSSTYCISFKVKNTEAVPPVKDLRKTMRIQALRCHVLYSHDGSK 198
Query: 927 LSVIPMHASRSQALRYLSIRWGIELPNAVVIVGETGDSDYEELFGGLHKTVIVKGGFNTP 748
L+ IP+ ASRSQALRYL IRWG+EL V+VGE+GD+DYE L GG+ KT+I+KG FN+
Sbjct: 199 LNFIPVLASRSQALRYLYIRWGVELSKMTVVVGESGDTDYEGLLGGMQKTIILKGSFNSV 378
Query: 747 ANRIHTVRRYPLQDVVALDSSNIIGIEGFSTGDIRSAMQQ 628
N++H R Y L+DVV+ D I +EG+S +++SA+QQ
Sbjct: 379 PNQLHAARSYSLEDVVSFDKPGIASVEGYSPDNLKSALQQ 498
>gb|CA015292.1|CA015292 HT13N20r HT Hordeum vulgare subsp. vulgare cDNA clone HT13N20
5-PRIME, mRNA sequence
Length = 544
Score = 214 bits (461), Expect = 2e-054
Identities = 82/150 (54%), Positives = 114/150 (76%)
Frame = -3 / +2
Query: 1077 IFEDSEHSSTYCLAFRVVNPNHLPPLKELQKLMRIQSLRCHALYNHGATRLSVIPMHASR 898
+ ED E SSTYC++F+V N +PP+K+L+K MRIQ+LRCH LY+H ++L+ IP+ ASR
Sbjct: 11 VTEDDECSSTYCISFKVKNTEAVPPVKDLRKTMRIQALRCHVLYSHDGSKLNFIPVLASR 190
Query: 897 SQALRYLSIRWGIELPNAVVIVGETGDSDYEELFGGLHKTVIVKGGFNTPANRIHTVRRY 718
SQALRYL IRWG+EL V+VGE+GD+DYE L GG+ KT+I+KG FN+ N++H R Y
Sbjct: 191 SQALRYLYIRWGVELSKMTVVVGESGDTDYEGLLGGMQKTIILKGSFNSVPNQLHAARSY 370
Query: 717 PLQDVVALDSSNIIGIEGFSTGDIRSAMQQ 628
L+DVV+ D I +EG+S +++SA+QQ
Sbjct: 371 SLEDVVSFDKPGIASVEGYSPDNLKSALQQ 460
>gb|BG416908.2|BG416908 HVSMEk0015C11f Hordeum vulgare testa/pericarp EST library HVcDNA0013
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEk0015C11f, mRNA sequence
Length = 488
Score = 172 bits (370), Expect(2) = 2e-054
Identities = 66/118 (55%), Positives = 90/118 (76%)
Frame = -3 / +3
Query: 1107 ERRGRTEKQVIFEDSEHSSTYCLAFRVVNPNHLPPLKELQKLMRIQSLRCHALYNHGATR 928
E+ ++ + ED E SSTYC++F+V N +PP+K+L+K MRIQ+LRCH LY+H ++
Sbjct: 135 EKNSERGQEAVTEDDECSSTYCISFKVKNTEAVPPVKDLRKTMRIQALRCHVLYSHDGSK 314
Query: 927 LSVIPMHASRSQALRYLSIRWGIELPNAVVIVGETGDSDYEELFGGLHKTVIVKGGFN 754
L+ IP+ ASRSQALRYL IRWG+EL V+VGE+GD+DYE L GG+ KT+I+KG FN
Sbjct: 315 LNFIPVLASRSQALRYLYIRWGVELSKMTVVVGESGDTDYEGLLGGMQKTIILKGSFN 488
Score = 62.0 bits (129), Expect(2) = 2e-054
Identities = 23/48 (47%), Positives = 33/48 (68%)
Frame = -3 / +3
Query: 1236 SSDVPSNSRVTFALDHNYRSHIEYRWGGEGLRKYLVKWASSVVERRGR 1093
S D+ S + + F +D +Y S I+YRWGGEGLRK L++WA+ RG+
Sbjct: 15 SEDMLSPAELPFMIDLDYHSQIQYRWGGEGLRKTLIRWAAEKNSERGQ 158
>gb|BM444184.1|BM444184 EBem09_SQ004_G12_R embryo, 1 Day germination, no treatment, cv
Optic, EBem09 Hordeum vulgare subsp. vulgare cDNA clone
EBem09_SQ004_G12 5', mRNA sequence
Length = 406
Score = 174 bits (375), Expect = 1e-042
Identities = 71/92 (77%), Positives = 83/92 (90%)
Frame = -3 / +1
Query: 906 ASRSQALRYLSIRWGIELPNAVVIVGETGDSDYEELFGGLHKTVIVKGGFNTPANRIHTV 727
ASRSQA+RYL +RWGIELPN VVIVGE+GDSDYEEL GGLH+T+I+KG FN ANRIHTV
Sbjct: 1 ASRSQAIRYLFVRWGIELPNIVVIVGESGDSDYEELLGGLHRTIILKGDFNIAANRIHTV 180
Query: 726 RRYPLQDVVALDSSNIIGIEGFSTGDIRSAMQ 631
RRYPLQDVVALDSSNII ++G +T DI+SA++
Sbjct: 181 RRYPLQDVVALDSSNIIEVQGCTTEDIKSALR 276
Score = 117 bits (251), Expect = 1e-025
Identities = 53/89 (59%), Positives = 59/89 (66%)
Frame = +2 / -3
Query: 638 ADLMSPVLNPSIPMIFELSRATTSCKGYLLTVWILFAGVLNPPLTMTVLWRXXXXXXXXX 817
ADLMS V+ P MI ELS ATTSCKGYLLTVWILFA +L P + VLWR
Sbjct: 269 ADLMSSVVQPWTSMILELSSATTSCKGYLLTVWILFAAMLKSPFRIMVLWRPPSSSS*SE 90
Query: 818 XXXXXTMTTAFGNSMPQRIDKYLRA*DRD 904
TMTT FGNS+PQR +KYL A*+RD
Sbjct: 89 SPLSPTMTTIFGNSIPQRTNKYLIA*ERD 3
>gb|BI950175.1|BI950175 HVSMEl0019E11f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0019E11f, mRNA sequence
Length = 470
Score = 168 bits (362), Expect = 7e-041
Identities = 64/117 (54%), Positives = 88/117 (75%)
Frame = -3 / +2
Query: 978 RIQSLRCHALYNHGATRLSVIPMHASRSQALRYLSIRWGIELPNAVVIVGETGDSDYEEL 799
RIQ+LRCH LY+H ++L+ IP+ ASRSQALRYL IRWG+EL V+VGE GD+DYE L
Sbjct: 2 RIQALRCHVLYSHDGSKLNFIPVLASRSQALRYLYIRWGVELSKMTVVVGENGDTDYEGL 181
Query: 798 FGGLHKTVIVKGGFNTPANRIHTVRRYPLQDVVALDSSNIIGIEGFSTGDIRSAMQQ 628
GG+ KT+I+KG FN+ N++H R Y L+DVV+ D I +EG+S ++++A+QQ
Sbjct: 182 LGGMQKTIILKGSFNSVPNQLHAARSYSLEDVVSFDKPGIASVEGYSPNNLKTALQQ 352
>gb|BJ468331.1|BJ468331 BJ468331 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags38e11 3', mRNA sequence
Length = 726
Score = 167 bits (360), Expect = 1e-040
Identities = 64/116 (55%), Positives = 88/116 (75%)
Frame = -3 / -1
Query: 975 IQSLRCHALYNHGATRLSVIPMHASRSQALRYLSIRWGIELPNAVVIVGETGDSDYEELF 796
IQ+LRCH LY+H ++L+ IP+ ASRSQALRYL IRWG+EL V+VGE+GD+DYE L
Sbjct: 726 IQALRCHVLYSHDGSKLNFIPVLASRSQALRYLYIRWGVELSKMTVVVGESGDTDYEGLL 547
Query: 795 GGLHKTVIVKGGFNTPANRIHTVRRYPLQDVVALDSSNIIGIEGFSTGDIRSAMQQ 628
GG+ KT+I+KG FN+ N++H R Y L+DVV+ D I +EG+S +++SA+QQ
Sbjct: 546 GGMQKTIILKGSFNSVPNQLHAARSYSLEDVVSFDKPGIASVEGYSPDNLKSALQQ 379
>gb|CA016632.1|CA016632 HV08B18u HV Hordeum vulgare subsp. vulgare cDNA clone HV08B18
3-PRIME, mRNA sequence
Length = 559
Score = 161 bits (346), Expect(2) = 8e-040
Identities = 62/83 (74%), Positives = 74/83 (89%)
Frame = -3 / -2
Query: 879 LSIRWGIELPNAVVIVGETGDSDYEELFGGLHKTVIVKGGFNTPANRIHTVRRYPLQDVV 700
LS+RWGIEL N V++VGE+GDSDYEELFGGLHKT+++KG FNTPANRIHTVRRYPLQDV+
Sbjct: 558 LSVRWGIELRNVVILVGESGDSDYEELFGGLHKTIVLKGEFNTPANRIHTVRRYPLQDVI 379
Query: 699 ALDSSNIIGIEGFSTGDIRSAMQ 631
ALD SNIIG+EG ST D+ ++
Sbjct: 378 ALDCSNIIGVEGCSTDDLTPTLK 310
Score = 24.0 bits (46), Expect(2) = 8e-040
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = -3 / -2
Query: 528 FPFYWKCPILPASHLMYV 475
FP + + PILPAS ++ V
Sbjct: 201 FPCWMEIPILPASRVVAV 148
>gb|BE601555.2|BE601555 HVSMEh0098G14f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0098G14f, mRNA sequence
Length = 636
Score = 161 bits (346), Expect = 1e-038
Identities = 61/112 (54%), Positives = 84/112 (75%)
Frame = -3 / +2
Query: 963 RCHALYNHGATRLSVIPMHASRSQALRYLSIRWGIELPNAVVIVGETGDSDYEELFGGLH 784
RCH LY+H ++L+ IP+ ASRSQALRYL IRWG+EL V+VGE+GD+DYE L GG+
Sbjct: 2 RCHVLYSHDGSKLNFIPVLASRSQALRYLYIRWGVELSKMTVVVGESGDTDYEGLLGGMQ 181
Query: 783 KTVIVKGGFNTPANRIHTVRRYPLQDVVALDSSNIIGIEGFSTGDIRSAMQQ 628
KT+I+KG FN+ N++H R Y L+DVV+ D I +EG+S +++SA+QQ
Sbjct: 182 KTIILKGSFNSVPNQLHAARSYSLEDVVSFDKPGIASVEGYSPDNLKSALQQ 337
>gb|BU994139.1|BU994139 HM05O02r HM Hordeum vulgare subsp. vulgare cDNA clone HM05O02
5-PRIME, mRNA sequence
Length = 593
Score = 130 bits (279), Expect(2) = 1e-038
Identities = 51/106 (48%), Positives = 76/106 (71%)
Frame = -3 / +2
Query: 1080 VIFEDSEHSSTYCLAFRVVNPNHLPPLKELQKLMRIQSLRCHALYNHGATRLSVIPMHAS 901
V+ D E + +C++F V +P + + E+++ +R++ LRCH +Y +TR+ V+P+ AS
Sbjct: 254 VVEPDVESCNAHCVSFFVRDPKKVRTIDEMRERLRMRGLRCHLMYCRNSTRMQVVPLMAS 433
Query: 900 RSQALRYLSIRWGIELPNAVVIVGETGDSDYEELFGGLHKTVIVKG 763
RSQALRYL +RWG+ + N +IVGE GD+D EE+ GLHKTVIVKG
Sbjct: 434 RSQALRYLFVRWGLAVGNMYLIVGEHGDTDREEMLSGLHKTVIVKG 571
Score = 50.6 bits (104), Expect(2) = 1e-038
Identities = 21/55 (38%), Positives = 31/55 (56%)
Frame = -3 / +2
Query: 1353 STSLTIAELQSVIVRTGMLPTDFDAFICNSGSDIYYPLQSSDVPSNSRVTFALDH 1189
ST++ E ++ + PTDFDA IC SGSD+YYP + + + R F D+
Sbjct: 2 STAIQFPETLQLLQMGKVPPTDFDALICGSGSDVYYPGTAQCLDAQGRFLFDQDY 166
>gb|BU985379.1|BU985379 HF06P13r HF Hordeum vulgare subsp. vulgare cDNA clone HF06P13
5-PRIME, mRNA sequence
Length = 559
Score = 99.6 bits (211), Expect(2) = 2e-037
Identities = 37/58 (63%), Positives = 54/58 (93%)
Frame = -2 / +2
Query: 1804 EQFGVTLIEAAMHGLPVIATKNGAPVEIYQVLENGLLVDPHDQHAIADALYKMLSEKQ 1631
E FG+TLIEAA +GLP++AT+NG PV+I++VL+NG+LVDPH+Q+ IA+ALY+++S+KQ
Sbjct: 14 EPFGLTLIEAAAYGLPMVATQNGGPVDIHRVLDNGILVDPHNQNDIAEALYRLVSDKQ 187
Score = 84.5 bits (178), Expect(2) = 8e-025
Identities = 43/70 (61%), Positives = 48/70 (68%)
Frame = +3 / -2
Query: 1596 FSIHFLDI*TQNCFSESIL*RASAIAC*SWGSTRRPFSRT**ISTGAPFFVAITGKPCMA 1775
FS FL NC SE+ L* ASAI+ * WGSTR P SRT ISTG PF+VA G+P A
Sbjct: 222 FSRPFLRHCAHNCLSETSL*SASAISF*LWGSTRMPLSRTRCISTGPPFWVATIGRP*AA 43
Query: 1776 ASIKVTPNCS 1805
ASIKV+PN S
Sbjct: 42 ASIKVSPNGS 13
Score = 77.6 bits (163), Expect(2) = 2e-037
Identities = 26/42 (61%), Positives = 35/42 (83%)
Frame = -3 / +2
Query: 1623 SRCRENGLKNIHQFSWPEHCKNYLSRISSLGPRHPAFACKED 1498
++CR+NGL+NIH+FSWPEHCKNYLSR+ +L RHP + +D
Sbjct: 194 AQCRKNGLENIHRFSWPEHCKNYLSRVGTLKSRHPRWQRSDD 319
Score = 50.6 bits (104), Expect(2) = 8e-025
Identities = 23/40 (57%), Positives = 25/40 (62%)
Frame = +2 / -2
Query: 1499 SSLHAKAGCLGPRLDILDK*FLQCSGQENWCIFFNPFSRH 1618
SSL GCL + D+*FLQCSGQEN IF PF RH
Sbjct: 318 SSLLCHRGCLDLSVPTRDR*FLQCSGQENRWIFSRPFLRH 199
>gb|CB874869.1|CB874869 HX06J01w HX Hordeum vulgare subsp. vulgare cDNA clone HX06J01
3-PRIME, mRNA sequence
Length = 563
Score = 146 bits (314), Expect(2) = 2e-035
Identities = 60/78 (76%), Positives = 70/78 (89%)
Frame = -3 / -2
Query: 864 GIELPNAVVIVGETGDSDYEELFGGLHKTVIVKGGFNTPANRIHTVRRYPLQDVVALDSS 685
GIELPN VVIVGE+GDSDYEEL GGLH+T+I+KG FN ANRIHTVRRYPLQDVVALDSS
Sbjct: 562 GIELPNIVVIVGESGDSDYEELLGGLHRTIILKGDFNIAANRIHTVRRYPLQDVVALDSS 383
Query: 684 NIIGIEGFSTGDIRSAMQ 631
NII ++G +T DI+SA++
Sbjct: 382 NIIEVQGCTTEDIKSALR 329
Score = 23.5 bits (45), Expect(2) = 2e-035
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -1 / -2
Query: 527 FHSIGNVRFCLPVI*CMC 474
FH+ RFCL ++ C C
Sbjct: 232 FHT*WECRFCL*IVECGC 179
>gb|AV833883.1|AV833883 AV833883 K. Sato unpublished cDNA library: Hordeum vulgare subsp.
vulgare shoots germination Hordeum vulgare subsp. vulgare
cDNA clone bags18o22, mRNA sequence
Length = 629
Score = 95.9 bits (203), Expect(2) = 9e-034
Identities = 40/78 (51%), Positives = 55/78 (70%)
Frame = -3 / +1
Query: 1476 RKHISIIAVDSVKKEDLIQIIRNSVEATRTGTMSGSTGFVLSTSLTIAELQSVIVRTGML 1297
RKHI +IAVDS + DL+QII+N +A+ SG+ GFVLSTS ++E+ ++ G+
Sbjct: 388 RKHIVVIAVDSXQDADLVQIIKNIFQASSKEKSSGALGFVLSTSRAVSEIHPLLTSGGIE 567
Query: 1296 PTDFDAFICNSGSDIYYP 1243
DFDAFIC+SGSD+ YP
Sbjct: 568 IADFDAFICSSGSDLCYP 621
Score = 72.5 bits (152), Expect(2) = 9e-034
Identities = 25/42 (59%), Positives = 34/42 (80%)
Frame = -3 / +1
Query: 1623 SRCRENGLKNIHQFSWPEHCKNYLSRISSLGPRHPAFACKED 1498
++ R+NGL+NIH+FSWPEHCKNYLSR+ +L RHP + +D
Sbjct: 1 AQXRKNGLENIHRFSWPEHCKNYLSRVGTLKSRHPRWQRSDD 126
>gb|BJ463533.1|BJ463533 BJ463533 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags32g04 5', mRNA sequence
Length = 705
Score = 139 bits (298), Expect = 5e-032
Identities = 57/65 (87%), Positives = 61/65 (93%)
Frame = -2 / +1
Query: 1825 FCKCCYFEQFGVTLIEAAMHGLPVIATKNGAPVEIYQVLENGLLVDPHDQHAIADALYKM 1646
F YFEQFGVTLIEAAMHGLPVIATKNGAPVEI+QVL+NGLLVDPHDQHAIADALYK+
Sbjct: 496 FVNVAYFEQFGVTLIEAAMHGLPVIATKNGAPVEIHQVLDNGLLVDPHDQHAIADALYKL 675
Query: 1645 LSEKQ 1631
LS+KQ
Sbjct: 676 LSDKQ 690
Score = 122 bits (262), Expect = 4e-027
Identities = 55/67 (82%), Positives = 56/67 (83%)
Frame = +3 / -2
Query: 1626 QNCFSESIL*RASAIAC*SWGSTRRPFSRT**ISTGAPFFVAITGKPCMAASIKVTPNCS 1805
Q+C SE L* ASAIAC*SWGSTRRP S T *ISTGAPFFVAITGKPCMAASIKVTPNCS
Sbjct: 695 QSCLSERSL*SASAIAC*SWGSTRRPLSNTW*ISTGAPFFVAITGKPCMAASIKVTPNCS 516
Query: 1806 K*QHLQK 1826
K* K
Sbjct: 515 K*ATFTK 495
Score = 115 bits (245), Expect = 1e-024
Identities = 46/67 (68%), Positives = 56/67 (83%)
Frame = +2 / -1
Query: 1628 KLLFRKHLIEGICNCMLIMGINKETIFQNLINFNRSPIFCCNNRQTVHGSLYQGDTKLFK 1807
+LL RK LIE ICNCMLI+GINKET+ Q+L+NF RS IFCCN R T+HGSLYQGDT+LFK
Sbjct: 693 ELLVRKKLIECICNCMLIVGINKETVVQHLVNFYRSSIFCCNYR*TMHGSLYQGDTELFK 514
Query: 1808 ITTFTKA 1828
++ K+
Sbjct: 513 VSYIYKS 493
Score = 101 bits (216), Expect = 1e-020
Identities = 42/61 (68%), Positives = 47/61 (77%)
Frame = +1 / -3
Query: 1627 KTAFQKASYRGHLQLHADHGDQQGDHFPEPDKFQQEPHFLLQ*QANRAWQPLSR*HQIVQ 1806
+ A QK +YR HLQLHAD GDQQGD P P +F QE HFLLQ Q N AWQPLSR*H+IVQ
Sbjct: 694 RVACQKEAYRVHLQLHADRGDQQGDRCPTPGEFLQELHFLLQLQVNHAWQPLSR*HRIVQ 515
Query: 1807 N 1809
+
Sbjct: 514 S 512
>gb|BG418110.1|BG418110 HVSMEk0021F18f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0021F18f, mRNA sequence
Length = 668
Score = 132 bits (282), Expect = 8e-030
Identities = 52/108 (48%), Positives = 74/108 (68%)
Frame = -3 / +1
Query: 951 LYNHGATRLSVIPMHASRSQALRYLSIRWGIELPNAVVIVGETGDSDYEELFGGLHKTVI 772
LY+H + + IP+ +S SQALRYL I WG+EL N V+VGE+ DS YE L GG+ KT+I
Sbjct: 4 LYSHDGCKSNFIPVLSSLSQALRYLYIMWGVELSNMTVVVGESCDSHYERLLGGMQKTII 183
Query: 771 VKGGFNTPANRIHTVRRYPLQDVVALDSSNIIGIEGFSTGDIRSAMQQ 628
+KG FN+ N++H Y L+DVV+ D I +EG+S +++S +QQ
Sbjct: 184 LKGSFNSVPNQLHATTSYSLKDVVSFDKPRIAYVEGYSPNNLKSTLQQ 327
>gb|BM442430.2|BM442430 EBan01_SQ003_C15_R anther, yellow stage, no treatment, cv Optic,
EBan01 Hordeum vulgare subsp. vulgare cDNA clone
EBan01_SQ003_C15 5', mRNA sequence
Length = 504
Score = 129 bits (276), Expect = 5e-029
Identities = 50/106 (47%), Positives = 76/106 (71%)
Frame = -3 / +1
Query: 1080 VIFEDSEHSSTYCLAFRVVNPNHLPPLKELQKLMRIQSLRCHALYNHGATRLSVIPMHAS 901
V+ D E + +C++F V +P + + E+++ +R++ LRCH +Y +TR+ V+P+ AS
Sbjct: 55 VVEPDVESCNAHCVSFFVRDPKKVRTIDEMRERLRMRGLRCHLMYCRNSTRMQVVPLMAS 234
Query: 900 RSQALRYLSIRWGIELPNAVVIVGETGDSDYEELFGGLHKTVIVKG 763
RSQAL+YL +RWG+ + N +IVGE GD+D EE+ GLHKTVIVKG
Sbjct: 235 RSQALKYLFVRWGLAVGNMYLIVGEHGDTDREEMLSGLHKTVIVKG 372
>gb|BU985680.1|BU985680 HF08E20r HF Hordeum vulgare subsp. vulgare cDNA clone HF08E20
5-PRIME, mRNA sequence
Length = 589
Score = 77.6 bits (163), Expect(3) = 2e-027
Identities = 26/42 (61%), Positives = 35/42 (83%)
Frame = -3 / +2
Query: 1623 SRCRENGLKNIHQFSWPEHCKNYLSRISSLGPRHPAFACKED 1498
++CR+NGL+NIH+FSWPEHCKNYLSR+ +L RHP + +D
Sbjct: 71 AQCRKNGLENIHRFSWPEHCKNYLSRVGTLKSRHPRWQRSDD 196
Score = 59.3 bits (123), Expect(3) = 2e-027
Identities = 26/44 (59%), Positives = 33/44 (75%)
Frame = -3 / +2
Query: 1476 RKHISIIAVDSVKKEDLIQIIRNSVEATRTGTMSGSTGFVLSTS 1345
RKHI +IAVDSV+ DL+QII+N +A+ SG+ GFVLSTS
Sbjct: 458 RKHIVVIAVDSVQDADLVQIIKNIFQASSKEKSSGALGFVLSTS 589
Score = 29.9 bits (59), Expect(3) = 2e-027
Identities = 10/18 (55%), Positives = 17/18 (94%)
Frame = -2 / +2
Query: 1684 HDQHAIADALYKMLSEKQ 1631
H+Q+ IA+ALY+++S+KQ
Sbjct: 11 HNQNDIAEALYRLVSDKQ 64
>gb|BG366918.2|BG366918 HVSMEi0008P16f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0008P16f, mRNA sequence
Length = 495
Score = 83.1 bits (175), Expect(2) = 7e-027
Identities = 34/57 (59%), Positives = 42/57 (73%)
Frame = -2 / +2
Query: 1804 EQFGVTLIEAAMHGLPVIATKNGAPVEIYQVLENGLLVDPHDQHAIADALYKMLSEK 1634
E +T+IEAA +GLPV+ATKNG PV+I + L NGLLVDPH AI AL +L+EK
Sbjct: 80 EPLSLTIIEAAAYGLPVVATKNGGPVDILKALHNGLLVDPHSGEAITGALLSLLAEK 250
Score = 58.8 bits (122), Expect(2) = 7e-027
Identities = 22/46 (47%), Positives = 28/46 (60%)
Frame = -3 / +2
Query: 1623 SRCRENGLKNIHQFSWPEHCKNYLSRISSLGPRHPAFACKEDHKVP 1486
S CR NGL+NIH+FSWP HC+ YLS +++ A H VP
Sbjct: 260 SECRRNGLRNIHRFSWPHHCRLYLSHVAAYCDHPSAHQRVRVHGVP 397
>gb|BJ454449.1|BJ454449 BJ454449 K. Sato unpublished cDNA library, cv. Akashinriki vegetative
stage leaves Hordeum vulgare subsp. vulgare cDNA clone
baak24h18 5', mRNA sequence
Length = 405
Score = 111 bits (238), Expect = 9e-024
Identities = 43/102 (42%), Positives = 69/102 (67%)
Frame = -3 / +3
Query: 1068 DSEHSSTYCLAFRVVNPNHLPPLKELQKLMRIQSLRCHALYNHGATRLSVIPMHASRSQA 889
D+ S +C A+ + + + + +++ +R++ RC+ +Y TRL+VIP+ ASR +A
Sbjct: 72 DASACSVHCHAYAATDASKVRKVDSIRQQLRMRGFRCNLVYTRACTRLNVIPLSASRPRA 251
Query: 888 LRYLSIRWGIELPNAVVIVGETGDSDYEELFGGLHKTVIVKG 763
LRYLSI+WGI+L V+VGE GD+D E+L GLH+T+I+ G
Sbjct: 252 LRYLSIQWGIDLSKVAVLVGEAGDTDREKLLPGLHRTLILPG 377
>gb|CB880803.1|CB880803 HM07O02w HM Hordeum vulgare subsp. vulgare cDNA clone HM07O02
3-PRIME, mRNA sequence
Length = 626
Score = 111 bits (238), Expect = 9e-024
Identities = 43/73 (58%), Positives = 57/73 (78%)
Frame = -3 / -1
Query: 981 MRIQSLRCHALYNHGATRLSVIPMHASRSQALRYLSIRWGIELPNAVVIVGETGDSDYEE 802
+R++ LRCH +Y +TR+ V+P+ ASRSQALRYL +RWG+ + N +IVGE GD+D EE
Sbjct: 623 LRMRGLRCHLMYCRNSTRMQVVPLMASRSQALRYLFVRWGLAVGNMYLIVGEHGDTDREE 444
Query: 801 LFGGLHKTVIVKG 763
+ GLHKTVIVKG
Sbjct: 443 MLSGLHKTVIVKG 405
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 814,765,101
Number of Sequences: 312970
Number of extensions: 12130059
Number of successful extensions: 49735
Number of sequences better than 1.0e-020: 47
length of database: 58,378,179
effective HSP length: 54
effective length of database: 41,477,799
effective search space used: 23020178445
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)