TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3042337.2.1
(945 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BF624750.2|BF624750 HVSMEa0017K07f Hordeum vulgare seedl... 271 3e-072
gb|BQ662325.1|BQ662325 HS01N10w HS Hordeum vulgare subsp. v... 248 3e-065
gb|BI948978.1|BI948978 HVSMEl0011O14f Hordeum vulgare spike... 182 2e-060
gb|AL500947.1|AL500947 AL500947 Hordeum vulgare Barke roots... 216 1e-055
gb|AL503532.1|AL503532 AL503532 Hordeum vulgare Barke roots... 192 3e-048
gb|AL504503.1|AL504503 AL504503 Hordeum vulgare Barke roots... 182 2e-045
gb|BQ662532.1|BQ662532 HS02N10u HS Hordeum vulgare subsp. v... 182 3e-045
gb|CA012717.1|CA012717 HT06D18r HT Hordeum vulgare subsp. v... 174 6e-043
gb|BI958239.1|BI958239 HVSMEn0014A11f Hordeum vulgare rachi... 160 8e-041
gb|AV919454.1|AV919454 AV919454 K. Sato unpublished cDNA li... 133 2e-038
gb|AV917230.1|AV917230 AV917230 K. Sato unpublished cDNA li... 133 2e-038
gb|BQ471267.1|BQ471267 HV01P03T HV Hordeum vulgare subsp. v... 133 2e-038
gb|BJ464883.1|BJ464883 BJ464883 K. Sato unpublished cDNA li... 133 2e-038
gb|BJ466813.1|BJ466813 BJ466813 K. Sato unpublished cDNA li... 131 6e-038
gb|BI956493.1|BI956493 HVSMEn0003M04f Hordeum vulgare rachi... 156 2e-037
gb|BJ449979.1|BJ449979 BJ449979 K. Sato unpublished cDNA li... 155 3e-037
gb|BJ457397.1|BJ457397 BJ457397 K. Sato unpublished cDNA li... 155 5e-037
gb|BJ545191.1|BJ545191 BJ545191 K. Sato unpublished cDNA li... 140 2e-035
gb|BJ546669.1|BJ546669 BJ546669 K. Sato unpublished cDNA li... 116 1e-034
gb|AV922397.1|AV922397 AV922397 K. Sato unpublished cDNA li... 120 1e-034
gb|BJ466913.1|BJ466913 BJ466913 K. Sato unpublished cDNA li... 120 1e-034
gb|BF629412.3|BF629412 HVSMEb0012D18f Hordeum vulgare seedl... 128 5e-034
gb|BQ664508.1|BQ664508 HV03K07u HV Hordeum vulgare subsp. v... 144 5e-034
gb|BJ463386.1|BJ463386 BJ463386 K. Sato unpublished cDNA li... 133 5e-033
gb|BF628635.2|BF628635 HVSMEb0006N15f Hordeum vulgare seedl... 95 6e-033
gb|BG415142.2|BG415142 HVSMEk0005E23f Hordeum vulgare testa... 126 9e-033
gb|CA000465.1|CA000465 HS08E18u HS Hordeum vulgare subsp. v... 140 9e-033
gb|AV921112.1|AV921112 AV921112 K. Sato unpublished cDNA li... 96 2e-032
gb|BI960513.1|BI960513 HVSMEn0024N22f Hordeum vulgare rachi... 115 4e-032
gb|BU999462.1|BU999462 HI14J11r HI Hordeum vulgare subsp. v... 116 5e-032
gb|BG416486.2|BG416486 HVSMEk0012I14f Hordeum vulgare testa... 137 1e-031
gb|BG299631.1|BG299631 HVSMEa0021C22f Hordeum vulgare seedl... 136 2e-031
gb|BF627303.3|BF627303 HVSMEb0004I01f Hordeum vulgare seedl... 109 3e-031
gb|CA019349.1|CA019349 HV11L11r HV Hordeum vulgare subsp. v... 133 2e-030
gb|BE215637.1|BE215637 HV_CEb0007H18f Hordeum vulgare seedl... 124 5e-030
gb|BI776301.2|BI776301 EBem04_SQ001_H10_R embryo, 12 DPA, n... 131 7e-030
gb|AV915997.1|AV915997 AV915997 K. Sato unpublished cDNA li... 96 2e-029
gb|BF253422.2|BF253422 HVSMEf0001G02f Hordeum vulgare seedl... 129 3e-029
gb|BE519743.1|BE519743 HV_CEb0021A21f Hordeum vulgare seedl... 64 3e-029
gb|AV936726.1|AV936726 AV936726 K. Sato unpublished cDNA li... 97 7e-029
gb|AV936516.1|AV936516 AV936516 K. Sato unpublished cDNA li... 97 7e-029
gb|BJ548975.1|BJ548975 BJ548975 K. Sato unpublished cDNA li... 97 7e-029
gb|AV936356.1|AV936356 AV936356 K. Sato unpublished cDNA li... 97 7e-029
gb|BJ548006.1|BJ548006 BJ548006 K. Sato unpublished cDNA li... 97 7e-029
gb|AV936349.1|AV936349 AV936349 K. Sato unpublished cDNA li... 97 7e-029
gb|BJ547960.1|BJ547960 BJ547960 K. Sato unpublished cDNA li... 97 7e-029
gb|BJ548998.1|BJ548998 BJ548998 K. Sato unpublished cDNA li... 97 7e-029
gb|BJ548386.1|BJ548386 BJ548386 K. Sato unpublished cDNA li... 97 7e-029
gb|AV935198.1|AV935198 AV935198 K. Sato unpublished cDNA li... 97 7e-029
gb|AU252315.1|AU252315 AU252315 salt-stressed barley root c... 91 8e-029
gb|BU968861.1|BU968861 HB08M23r BC Hordeum vulgare subsp. v... 96 1e-028
gb|AV919113.1|AV919113 AV919113 K. Sato unpublished cDNA li... 99 3e-028
gb|AV917809.1|AV917809 AV917809 K. Sato unpublished cDNA li... 99 3e-028
gb|AV922497.1|AV922497 AV922497 K. Sato unpublished cDNA li... 99 4e-028
gb|AV919240.1|AV919240 AV919240 K. Sato unpublished cDNA li... 99 4e-028
gb|BF631513.2|BF631513 HVSMEb0016D19f Hordeum vulgare seedl... 124 8e-028
gb|BJ549009.1|BJ549009 BJ549009 K. Sato unpublished cDNA li... 93 1e-027
gb|AL502922.1|AL502922 AL502922 Hordeum vulgare Barke roots... 123 2e-027
gb|AV930421.1|AV930421 AV930421 K. Sato unpublished cDNA li... 97 2e-027
gb|BJ546119.1|BJ546119 BJ546119 K. Sato unpublished cDNA li... 95 9e-027
gb|BJ546501.1|BJ546501 BJ546501 K. Sato unpublished cDNA li... 95 9e-027
gb|BJ466861.1|BJ466861 BJ466861 K. Sato unpublished cDNA li... 97 2e-026
gb|AV919647.1|AV919647 AV919647 K. Sato unpublished cDNA li... 97 2e-026
gb|AV913934.1|AV913934 AV913934 K. Sato unpublished cDNA li... 97 2e-026
gb|AV918301.1|AV918301 AV918301 K. Sato unpublished cDNA li... 97 2e-026
gb|AV918176.1|AV918176 AV918176 K. Sato unpublished cDNA li... 97 2e-026
gb|AV922405.1|AV922405 AV922405 K. Sato unpublished cDNA li... 97 2e-026
gb|AV916927.1|AV916927 AV916927 K. Sato unpublished cDNA li... 97 2e-026
gb|BM816874.1|BM816874 HB105E09_SK.ab1 HB Hordeum vulgare s... 90 3e-026
gb|BJ465003.1|BJ465003 BJ465003 K. Sato unpublished cDNA li... 90 3e-026
gb|BF259778.3|BF259778 HVSMEf0020D20f Hordeum vulgare seedl... 90 4e-026
gb|CA030582.1|CA030582 HX07H18r HX Hordeum vulgare subsp. v... 63 4e-026
gb|BI960706.1|BI960706 HVSMEn0001B07f Hordeum vulgare rachi... 117 1e-025
gb|BI955765.1|BI955765 HVSMEm0024G17f Hordeum vulgare green... 87 7e-025
gb|AV927306.1|AV927306 AV927306 K. Sato unpublished cDNA li... 85 1e-024
gb|BI957225.1|BI957225 HVSMEn0008D16f Hordeum vulgare rachi... 90 1e-024
gb|BF628382.2|BF628382 HVSMEb0003O04f Hordeum vulgare seedl... 112 2e-024
gb|AV920965.1|AV920965 AV920965 K. Sato unpublished cDNA li... 84 2e-024
gb|AV931728.1|AV931728 AV931728 K. Sato unpublished cDNA li... 89 5e-024
gb|CB880227.1|CB880227 HM05O04w HM Hordeum vulgare subsp. v... 81 5e-024
gb|AJ434580.1|AJ434580 AJ434580 S00002 Hordeum vulgare subs... 79 5e-024
gb|BE519761.3|BE519761 HV_CEb0021C04f Hordeum vulgare seedl... 83 1e-023
gb|BJ544646.1|BJ544646 BJ544646 K. Sato unpublished cDNA li... 95 3e-023
gb|BJ453643.1|BJ453643 BJ453643 K. Sato unpublished cDNA li... 84 3e-023
gb|AV918673.1|AV918673 AV918673 K. Sato unpublished cDNA li... 79 8e-023
gb|AV913374.1|AV913374 AV913374 K. Sato unpublished cDNA li... 79 8e-023
gb|BJ452936.1|BJ452936 BJ452936 K. Sato unpublished cDNA li... 83 8e-023
gb|AV917596.1|AV917596 AV917596 K. Sato unpublished cDNA li... 75 1e-022
gb|CA009374.1|CA009374 HU13P05r HU Hordeum vulgare subsp. v... 63 2e-022
gb|AV918446.1|AV918446 AV918446 K. Sato unpublished cDNA li... 85 2e-022
gb|BF254550.2|BF254550 HVSMEf0004F12f Hordeum vulgare seedl... 105 3e-022
gb|BG301188.1|BG301188 HVSMEb0019N18f Hordeum vulgare seedl... 68 5e-022
gb|BJ545019.1|BJ545019 BJ545019 K. Sato unpublished cDNA li... 95 5e-022
gb|AU252316.1|AU252316 AU252316 salt-stressed barley root c... 60 6e-022
gb|AV917240.1|AV917240 AV917240 K. Sato unpublished cDNA li... 77 9e-022
gb|AV922407.1|AV922407 AV922407 K. Sato unpublished cDNA li... 77 9e-022
gb|BF627063.2|BF627063 HVSMEb0002G10f Hordeum vulgare seedl... 98 1e-021
gb|BQ758724.1|BQ758724 EBma07_SQ002_J15_R maternal, 21 DPA,... 74 1e-021
gb|CA025677.1|CA025677 HZ52M20r HZ Hordeum vulgare subsp. v... 73 2e-021
gb|AV913057.1|AV913057 AV913057 K. Sato unpublished cDNA li... 103 2e-021
gb|CA020031.1|CA020031 HV14C06r HV Hordeum vulgare subsp. v... 102 3e-021
emb|AJ495774.1|HVU495774 Hordeum vulgare partial mRNA for p... 51 4e-021
gb|AY989887.1| Hordeum vulgare subsp. vulgare cytochrome P4... 51 4e-021
gb|BM371202.2|BM371202 EBro04_SQ003_N08_R root, 3 week, sal... 63 4e-021
gb|AV917724.1|AV917724 AV917724 K. Sato unpublished cDNA li... 75 4e-021
gb|BJ475646.1|BJ475646 BJ475646 K. Sato unpublished cDNA li... 76 6e-021
gb|AV912967.1|AV912967 AV912967 K. Sato unpublished cDNA li... 95 6e-021
gb|BE216646.1|BE216646 HV_CEb0011B08f Hordeum vulgare seedl... 51 7e-021
>gb|BF624750.2|BF624750 HVSMEa0017K07f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0017K07f, mRNA sequence
Length = 763
Score = 271 bits (587), Expect = 3e-072
Identities = 107/162 (66%), Positives = 127/162 (78%)
Frame = -2 / +1
Query: 944 SLQKSEPEVYTDTMIMALCSSMFAGGSXXXXXXXEWAMSLLLSHPDVLEKAQAEIDASAG 765
+LQK+EPEVYTDTMI A C+++F G+ EWAMSLLL+HP L KAQAEID + G
Sbjct: 124 TLQKTEPEVYTDTMITAPCANLFGAGTETTSSTTEWAMSLLLNHPAALRKAQAEIDVAVG 303
Query: 764 HSRLLGADDLPRLGYLHCIVSETLRLYPVVPTLVPHESTADCTVGGHRVPSGTMLLVNVY 585
RL+ ADD+PRL YL CIVSETLRLYP P L+PH+S+ADC VGG+ VPSGTML+VN Y
Sbjct: 304 TCRLVTADDVPRLAYLQCIVSETLRLYPAAPMLLPHQSSADCKVGGYNVPSGTMLMVNAY 483
Query: 584 AIHRDPAIWADPAAFRPERFEDGRADGLFVMPFGMGRRKCPG 459
AIHRDPA W P F PERFEDG+A+G F++PFGMG R+CPG
Sbjct: 484 AIHRDPAAWERPLEFVPERFEDGKAEGRFMIPFGMGLRRCPG 609
Score = 162 bits (349), Expect = 2e-039
Identities = 74/160 (46%), Positives = 83/160 (51%)
Frame = +1 / -3
Query: 460 PGHFRLPIPNGITXXXXXXXXXXXXGLNAAGSAHIAGSLWMAYTLTRSIVPLGTRWPPTV 639
PGH R PIPNGI G N++G +H AGS WMAY T SIVPLGT PPT+
Sbjct: 608 PGHRRRPIPNGIMNRPSALPSSNRSGTNSSGRSHAAGSRWMAYAFTISIVPLGTL*PPTL 429
Query: 640 QSAVDSCGTSVGTTGYSRRVSLTMQWXXXXXXXXXXXXXXECPADASISACAFSRTSGWL 819
QSA D CG+S+G GYSR VSLTM + P SISACAF +GW
Sbjct: 428 QSADDWCGSSIGAAGYSRSVSLTMHCR*ASRGTSSAVTSRQVPTATSISACAFLSAAGWF 249
Query: 820 XXXXXXXXXXXXXXXEPPANMLEHRAMIMVSVYTSGSDFC 939
P N A+IMVSVYTSGS FC
Sbjct: 248 SSNDMAHSVVDDVVSVPAPNKFAQGAVIMVSVYTSGSVFC 129
Score = 134 bits (288), Expect(2) = 2e-035
Identities = 67/122 (54%), Positives = 74/122 (60%)
Frame = +3 / -2
Query: 462 GAFPPSHPERHHEQPVGTAVLEPLRPERGWVRPYRGVPVDGVHVDEEHRPARHTVAADRA 641
GA P +HPER HE P+G AVLEPLR E P R V VDGV V +HR ARH VAA+ A
Sbjct: 606 GAPPKAHPERDHEPPLGLAVLEPLRDELQRPLPRRRVAVDGVRVHHQHRAARHVVAANLA 427
Query: 642 VGGGLVRDQRRHDRVQPQGLADDAVEVAEARQVVGAEQPGVPRGRVNLRLRFLQNIGVA* 821
V LVR Q R RVQPQ LA DA++V E VVG QP G V+L LR Q V
Sbjct: 426 VRRRLVRQQHRRRRVQPQRLAHDALQVGEPGHVVGGHQPAGAHGHVDLGLRLPQRRRVVQ 247
Query: 822 QQ 827
QQ
Sbjct: 246 QQ 241
Score = 89.5 bits (189), Expect(3) = 3e-022
Identities = 44/78 (56%), Positives = 49/78 (62%)
Frame = -1 / +3
Query: 711 HRQRDPAAVPGRADAGPARVHRRLHGRRPPCAERDDAPRQRVRHPQGPRDMGGPSRVQAG 532
HR+RD AAVPG ADA A V L G R AER DA +RVRHP P +G + V+ G
Sbjct: 357 HRERDAAAVPGGADAAAAPVVGGLQGWRLQRAERHDADGERVRHPPRPGGVGAAAGVRPG 536
Query: 531 AVRGRPCRRAVRDAVRDG 478
AVRGR R AV D VRDG
Sbjct: 537 AVRGRQGRGAVHDPVRDG 590
Score = 35.9 bits (72), Expect(3) = 3e-022
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = -1 / +3
Query: 942 TAEVRTGGVHGYHDHGSVLEHV 877
+AE GGVH YHDHGS+ E +
Sbjct: 126 SAEDGAGGVHRYHDHGSLREFI 191
Score = 34.5 bits (69), Expect(2) = 2e-035
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = +2 / -1
Query: 884 SSTEP*SWYPCTPPVLTSA 940
S EP*SWY CTPP +SA
Sbjct: 184 SRREP*SWYRCTPPAPSSA 128
Score = 21.7 bits (41), Expect(3) = 3e-022
Identities = 6/12 (50%), Positives = 10/12 (83%)
Frame = -2 / +1
Query: 362 EGGGITLPRAVP 327
+ GG+T+P+ VP
Sbjct: 715 KSGGLTIPKRVP 750
>gb|BQ662325.1|BQ662325 HS01N10w HS Hordeum vulgare subsp. vulgare cDNA clone HS01N10
3-PRIME, mRNA sequence
Length = 504
Score = 248 bits (537), Expect = 3e-065
Identities = 97/133 (72%), Positives = 112/133 (84%)
Frame = -2 / -1
Query: 668 LVPHESTADCTVGGHRVPSGTMLLVNVYAIHRDPAIWADPAAFRPERFEDGRADGLFVMP 489
L+PHES+ADC VGG+ VPSGTML+VN YAIHRDPA W DP AFRPERFEDG+ DGL +MP
Sbjct: 501 LLPHESSADCKVGGYDVPSGTMLIVNAYAIHRDPATWEDPTAFRPERFEDGKGDGLLLMP 322
Query: 488 FGMGRRKCPGEALALRTLGLVLGTLIQCFDWDTVGGAEVDMAEGGGITLPRAVPLEAICK 309
FGMGRR+CPGEALAL+T+G+VLG L+QCFDWD V G EVDM EG GIT+P+ V LEA+C+
Sbjct: 321 FGMGRRRCPGEALALQTVGVVLGMLVQCFDWDRVDGVEVDMTEGVGITMPKTVALEAVCR 142
Query: 308 PRHAMLGVLKGL* 270
PR AM VL L*
Sbjct: 141 PRAAMRDVLHKL* 103
Score = 152 bits (327), Expect = 2e-036
Identities = 68/133 (51%), Positives = 80/133 (60%)
Frame = +1 / +2
Query: 271 HSPLRTPSIAWRGLQMASRGTALGXXXXXXXXXXXXXXXXXXQSKHWINVPRTSPSVRSA 450
HS RT +A RGL AS+ T LG QSKH ++PRT+P+V SA
Sbjct: 104 HSL*RTSRMAARGLHTASKATVLGMVIPTPSVMSTSTPSTRSQSKHCTSIPRTTPTVCSA 283
Query: 451 RASPGHFRLPIPNGITXXXXXXXXXXXXGLNAAGSAHIAGSLWMAYTLTRSIVPLGTRWP 630
ASPGH R PIPNGI+ G NA GS+H+AGSLWMAY T S+VPLGT P
Sbjct: 284 SASPGHLRRPIPNGISSSPSPLPSSNRSGRNAVGSSHVAGSLWMAYAFTISMVPLGTS*P 463
Query: 631 PTVQSAVDSCGTS 669
PT+QSA DSCG+S
Sbjct: 464 PTLQSAEDSCGSS 502
Score = 144 bits (310), Expect = 5e-034
Identities = 68/134 (50%), Positives = 78/134 (58%)
Frame = +3 / +1
Query: 270 SQSLEDAKHSMARLADGLQRDSPRERDSAPFGHIDLGAADRVPVEALXXXXXXXXXXXXX 449
SQ ++D H R GLQ D P H+ L A +PVEAL
Sbjct: 103 SQLVKDIAHGSTRPTHGLQSHGLGHGDPHPLRHVHLHAVHPIPVEALHQHPENNPDRLQR 282
Query: 450 EGLSGAFPPSHPERHHEQPVGTAVLEPLRPERGWVRPYRGVPVDGVHVDEEHRPARHTVA 629
+ L+GA PP HPERH +QPV AVLEPLRPER V P R VPVDGV V ++H ARH VA
Sbjct: 283 QRLAGAPPPPHPERHQQQPVALAVLEPLRPERRRVLPRRRVPVDGVRVHDQHGAARHVVA 462
Query: 630 ADRAVGGGLVRDQR 671
AD AVGGGLVR Q+
Sbjct: 463 ADLAVGGGLVRQQQ 504
Score = 100 bits (212), Expect(2) = 4e-022
Identities = 46/68 (67%), Positives = 49/68 (72%)
Frame = -1 / -3
Query: 669 AGPARVHRRLHGRRPPCAERDDAPRQRVRHPQGPRDMGGPSRVQAGAVRGRPCRRAVRDA 490
A ARV RRL GRR AER A R+RVRHPQGP D+GGP V AGAVRGR RRA DA
Sbjct: 502 AAAARVLRRLQGRRLRRAERHHADRERVRHPQGPGDVGGPDGVPAGAVRGRQGRRAAADA 323
Query: 489 VRDGKAEM 466
VRDG AE+
Sbjct: 322 VRDGAAEV 299
Score = 26.7 bits (52), Expect(2) = 4e-022
Identities = 9/20 (45%), Positives = 10/20 (50%)
Frame = -3 / -2
Query: 328 LWRPSASRAMLCLASSRDCE 269
LWRP R + C S CE
Sbjct: 161 LWRPCVGRVLPCAMSFTSCE 102
>gb|BI948978.1|BI948978 HVSMEl0011O14f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0011O14f, mRNA sequence
Length = 813
Score = 182 bits (391), Expect(3) = 2e-060
Identities = 72/114 (63%), Positives = 91/114 (79%)
Frame = -2 / +1
Query: 944 SLQKSEPEVYTDTMIMALCSSMFAGGSXXXXXXXEWAMSLLLSHPDVLEKAQAEIDASAG 765
+LQK+EPE+YTD MI+ALC++ GG+ EWAMSLLL+HP L+KAQAEIDAS G
Sbjct: 88 TLQKTEPELYTDQMIIALCANRGVGGTETTSTTIEWAMSLLLNHPAALKKAQAEIDASIG 267
Query: 764 HSRLLGADDLPRLGYLHCIVSETLRLYPVVPTLVPHESTADCTVGGHRVPSGTM 603
SR++ ADD+PRL YL CI++ETLR+YP P L+PHES+ADC VGG+ +PSGTM
Sbjct: 268 TSRMVAADDVPRLSYLQCIINETLRMYPAAPLLLPHESSADCKVGGYDLPSGTM 429
Score = 112 bits (240), Expect(3) = 7e-037
Identities = 51/113 (45%), Positives = 59/113 (52%)
Frame = +1 / -2
Query: 601 SIVPLGTRWPPTVQSAVDSCGTSVGTTGYSRRVSLTMQWXXXXXXXXXXXXXXECPADAS 780
++VPLG PPT+QSA DSCG+S G GY R VSL M W E P DAS
Sbjct: 431 AMVPLGKS*PPTLQSAEDSCGSSSGAAGYMRSVSLMMHWR*LRRGTSSAATMREVPMDAS 252
Query: 781 ISACAFSRTSGWLXXXXXXXXXXXXXXXEPPANMLEHRAMIMVSVYTSGSDFC 939
ISA AF +GW PP + HRAMI+ SVY+SGS FC
Sbjct: 251 ISAWAFLSAAGWFSSSDIAHSIVVEVVSVPPTPLFAHRAMII*SVYSSGSVFC 93
Score = 85.8 bits (181), Expect(5) = 2e-028
Identities = 43/75 (57%), Positives = 47/75 (62%)
Frame = +3 / -1
Query: 603 HRPARHTVAADRAVGGGLVRDQRRHDRVQPQGLADDAVEVAEARQVVGAEQPGVPRGRVN 782
H PAR VAAD AVGGGLVR Q+R RV L DDA+EVAEA VVG G P GRV+
Sbjct: 429 HGPARQVVAADLAVGGGLVRQQQRRRRVHA*RLVDDALEVAEAGHVVGGNHAGGPDGRVD 250
Query: 783 LRLRFLQNIGVA*QQ 827
L L L+ V QQ
Sbjct: 249 LGLGLLERRRVVQQQ 205
Score = 46.9 bits (96), Expect(3) = 2e-060
Identities = 22/45 (48%), Positives = 26/45 (57%)
Frame = -2 / +1
Query: 551 PAAFRPERFEDGRADGLFVMPFGMGRRKCPGEALALRTLGLVLGT 417
P R ER DG+ DGL +MP G G PG ALAL+ G LG+
Sbjct: 481 PHCVRAERV*DGKGDGLLLMPVGRGGGGGPGRALALKPGGGALGS 615
Score = 42.8 bits (87), Expect(3) = 2e-060
Identities = 17/26 (65%), Positives = 20/26 (76%)
Frame = -1 / +1
Query: 603 APRQRVRHPQGPRDMGGPSRVQAGAV 526
A R+RVRHPQGP D+GGP V+A V
Sbjct: 430 ADRERVRHPQGPGDVGGPHCVRAERV 507
Score = 40.5 bits (82), Expect(3) = 7e-037
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = +3 / -1
Query: 450 EGLSGAFPPSHPERHHEQPVGTAVLEPLRP 539
+G GA P P+RH ++PV VL+PLRP
Sbjct: 582 QGPPGATSPPPPDRHQQKPVALPVLDPLRP 493
Score = 39.1 bits (79), Expect(3) = 7e-037
Identities = 15/24 (62%), Positives = 17/24 (70%)
Frame = +1 / -1
Query: 541 NAAGSAHIAGSLWMAYTLTRSIVP 612
NA GS+H+ GSLWMAY T S P
Sbjct: 492 NAVGSSHVPGSLWMAYAFTISHGP 421
Score = 33.6 bits (67), Expect(5) = 2e-028
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +2 / -2
Query: 527 TAPA*TRLGPPISRGPCGW 583
T A T+ GPP S GPCGW
Sbjct: 506 TRSARTQWGPPTSPGPCGW 450
Score = 30.4 bits (60), Expect(5) = 2e-028
Identities = 13/19 (68%), Positives = 13/19 (68%)
Frame = +2 / -3
Query: 479 PSRTASRTARRHGRPRTAP 535
PSR AS ARR RPR AP
Sbjct: 553 PSRQASAEARRPSRPRPAP 497
Score = 24.9 bits (48), Expect(5) = 2e-028
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = +3 / -1
Query: 885 RAQSHDHGIRVHLRF*LLQ 941
R QS DH I V LR LLQ
Sbjct: 147 RTQSDDHLISVQLRLRLLQ 91
Score = 23.5 bits (45), Expect(5) = 2e-028
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +1 / -2
Query: 418 VPRTSPSVRSARASPGHFRLPIPNGIT 498
+P P ARA PG P+P GI+
Sbjct: 614 LPSAPPPGFRARALPGPPPPPLPTGIS 534
>gb|AL500947.1|AL500947 AL500947 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW02H20u 3', mRNA sequence
Length = 393
Score = 216 bits (467), Expect = 1e-055
Identities = 87/127 (68%), Positives = 102/127 (80%)
Frame = -2 / +1
Query: 944 SLQKSEPEVYTDTMIMALCSSMFAGGSXXXXXXXEWAMSLLLSHPDVLEKAQAEIDASAG 765
+LQK+EPEVYTDTMI ALC+++F G+ EWAMSLLL+HP L KAQAEID + G
Sbjct: 10 TLQKTEPEVYTDTMITALCANLFGAGTETTSSTTEWAMSLLLNHPAALRKAQAEIDVAVG 189
Query: 764 HSRLLGADDLPRLGYLHCIVSETLRLYPVVPTLVPHESTADCTVGGHRVPSGTMLLVNVY 585
SRL+ ADD+PRL YL CIVSETLRLYP P L+PH+S+ADC VGG+ VPSGTML+VN Y
Sbjct: 190 TSRLVTADDVPRLAYLQCIVSETLRLYPAAPMLLPHQSSADCKVGGYNVPSGTMLMVNAY 369
Query: 584 AIHRDPA 564
AIHRDPA
Sbjct: 370 AIHRDPA 390
Score = 134 bits (288), Expect = 6e-031
Identities = 62/125 (49%), Positives = 67/125 (53%)
Frame = +1 / -2
Query: 565 AGSLWMAYTLTRSIVPLGTRWPPTVQSAVDSCGTSVGTTGYSRRVSLTMQWXXXXXXXXX 744
AGS WMAY T SIVPLGT PPT+QSA D CG+S+G GYSR VSLTM
Sbjct: 389 AGSRWMAYAFTISIVPLGTL*PPTLQSADDWCGSSIGAAGYSRSVSLTMHCR*ASRGTSS 210
Query: 745 XXXXXECPADASISACAFSRTSGWLXXXXXXXXXXXXXXXEPPANMLEHRAMIMVSVYTS 924
E P SISACAF +GW P N RA+IMVSVYTS
Sbjct: 209 AVTSREVPTATSISACAFLSAAGWFSSNDMAHSVVDDVVSVPAPNKFAQRAVIMVSVYTS 30
Query: 925 GSDFC 939
GS FC
Sbjct: 29 GSVFC 15
Score = 95.0 bits (201), Expect(2) = 2e-023
Identities = 48/88 (54%), Positives = 53/88 (60%)
Frame = +3 / -1
Query: 564 RGVPVDGVHVDEEHRPARHTVAADRAVGGGLVRDQRRHDRVQPQGLADDAVEVAEARQVV 743
R V VDGV V +HR ARH VAA+ AV LVR Q R RVQPQ LA DA++V E VV
Sbjct: 390 RRVAVDGVRVHHQHRAARHVVAANLAVRRRLVRQQHRRRRVQPQRLAHDALQVGEPGHVV 211
Query: 744 GAEQPGVPRGRVNLRLRFLQNIGVA*QQ 827
G QPG G V+L LR Q V QQ
Sbjct: 210 GGHQPGGAHGHVDLGLRLPQRRRVVQQQ 127
Score = 34.5 bits (69), Expect(2) = 2e-023
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = +2 / -3
Query: 884 SSTEP*SWYPCTPPVLTSA 940
S EP*SWY CTPP +SA
Sbjct: 70 SRREP*SWYRCTPPAPSSA 14
>gb|AL503532.1|AL503532 AL503532 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW02H20T 5', mRNA sequence
Length = 700
Score = 192 bits (413), Expect = 3e-048
Identities = 73/107 (68%), Positives = 88/107 (82%)
Frame = -2 / -3
Query: 587 YAIHRDPAIWADPAAFRPERFEDGRADGLFVMPFGMGRRKCPGEALALRTLGLVLGTLIQ 408
YAIHRDPA W P F PERFEDG+A+G F++PFGMGRR+CPG LALRT+G+VL TL+Q
Sbjct: 542 YAIHRDPAAWERPLEFVPERFEDGKAEGRFMIPFGMGRRRCPGXTLALRTIGMVLATLVQ 363
Query: 407 CFDWDTVGGAEVDMAEGGGITLPRAVPLEAICKPRHAMLGVLKGL*A 267
CFDWD V G EVDM E GG+T+P+AVPLEA+C+PR AM VL+ L*+
Sbjct: 362 CFDWDRVDGKEVDMTESGGLTIPKAVPLEAVCRPRPAMRDVLQSL*S 222
>gb|AL504503.1|AL504503 AL504503 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW05H19V 5', mRNA sequence
Length = 700
Score = 182 bits (393), Expect = 2e-045
Identities = 71/131 (54%), Positives = 90/131 (68%)
Frame = -2 / +2
Query: 674 PTLVPHESTADCTVGGHRVPSGTMLLVNVYAIHRDPAIWADPAAFRPERFEDGRADGLFV 495
P + HE+ DCTVGG RV GTM+LVN +AIHRD +W P F PERF D +
Sbjct: 2 PIIPAHEAMEDCTVGGFRVQRGTMILVNAWAIHRDANVWDAPEEFMPERFMDKDTVTTPM 181
Query: 494 MPFGMGRRKCPGEALALRTLGLVLGTLIQCFDWDTVGGAEVDMAEGGGITLPRAVPLEAI 315
+PFG+GRR+CPGE LA+R +GL L TL+QCF+WD G +DMAEG G+++P A PL AI
Sbjct: 182 LPFGLGRRRCPGEGLAMRLVGLTLATLVQCFEWDVGQGDTIDMAEGAGLSMPMATPLAAI 361
Query: 314 CKPRHAMLGVL 282
C+PR + VL
Sbjct: 362 CRPREFVQSVL 394
>gb|BQ662532.1|BQ662532 HS02N10u HS Hordeum vulgare subsp. vulgare cDNA clone HS02N10
3-PRIME, mRNA sequence
Length = 448
Score = 182 bits (392), Expect = 3e-045
Identities = 71/100 (71%), Positives = 83/100 (83%)
Frame = -2 / -3
Query: 569 PAIWADPAAFRPERFEDGRADGLFVMPFGMGRRKCPGEALALRTLGLVLGTLIQCFDWDT 390
PA W DP AFRPERFEDG+ DGL ++PFGMGRR+CPGEALAL+T+G+VLG L+QCFDWD
Sbjct: 446 PATWEDPTAFRPERFEDGKGDGLLLIPFGMGRRRCPGEALALQTVGVVLGMLVQCFDWDR 267
Query: 389 VGGAEVDMAEGGGITLPRAVPLEAICKPRHAMLGVLKGL* 270
V G EVDM EG GIT+P+AV LEA+C+PR AM VL L*
Sbjct: 266 VDGVEVDMTEGVGITMPKAVALEAVCRPRAAMRDVLHKL* 147
>gb|CA012717.1|CA012717 HT06D18r HT Hordeum vulgare subsp. vulgare cDNA clone HT06D18
5-PRIME, mRNA sequence
Length = 564
Score = 174 bits (375), Expect = 6e-043
Identities = 66/98 (67%), Positives = 81/98 (82%)
Frame = -2 / +2
Query: 560 WADPAAFRPERFEDGRADGLFVMPFGMGRRKCPGEALALRTLGLVLGTLIQCFDWDTVGG 381
W P F PERFEDG+A+G F++PFGMGRR+CPGE LALRT+G+VL TL+QCFDWD V G
Sbjct: 11 WERPLEFVPERFEDGKAEGRFMIPFGMGRRRCPGETLALRTIGMVLATLVQCFDWDRVDG 190
Query: 380 AEVDMAEGGGITLPRAVPLEAICKPRHAMLGVLKGL*A 267
EVDM E GG+T+P+AVPLEA+C+PR AM VL+ L*+
Sbjct: 191 KEVDMTESGGLTIPKAVPLEAVCRPRPAMRDVLQSL*S 304
>gb|BI958239.1|BI958239 HVSMEn0014A11f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0014A11f, mRNA sequence
Length = 674
Score = 160 bits (344), Expect(2) = 8e-041
Identities = 64/143 (44%), Positives = 90/143 (62%)
Frame = -2 / +1
Query: 944 SLQKSEPEVYTDTMIMALCSSMFAGGSXXXXXXXEWAMSLLLSHPDVLEKAQAEIDASAG 765
SL E + TDT + AL ++F G+ EWA++ L+ HPD+L++AQ E+DA G
Sbjct: 82 SLTGGEEDKITDTDVKALILNLFVAGTETTSTMVEWAVAELIRHPDMLKRAQEELDAVVG 261
Query: 764 HSRLLGADDLPRLGYLHCIVSETLRLYPVVPTLVPHESTADCTVGGHRVPSGTMLLVNVY 585
+L+ DLPRL +L ++ ET RL+P P +P ++ +C V G+R+P GT LLVNV+
Sbjct: 262 RDKLVAESDLPRLAFLGAVIKETFRLHPSTPLSLPRMASEECEVAGYRIPKGTELLVNVW 441
Query: 584 AIHRDPAIWADPAAFRPERFEDG 516
I RDPA+W DP FRP RF G
Sbjct: 442 GIARDPALWPDPLEFRPARFLPG 510
Score = 27.2 bits (53), Expect(2) = 8e-041
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -2 / +2
Query: 449 ALRTLGLVLGTLIQCFDWDTVG 384
ALR + + GTL+ FDW+ G
Sbjct: 605 ALRWVTVTTGTLVAFFDWELPG 670
>gb|AV919454.1|AV919454 AV919454 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags6b21 3', mRNA sequence
Length = 712
Score = 133 bits (284), Expect(2) = 2e-038
Identities = 53/120 (44%), Positives = 74/120 (61%)
Frame = -2 / -1
Query: 878 FAGGSXXXXXXXEWAMSLLLSHPDVLEKAQAEIDASAGHSRLLGADDLPRLGYLHCIVSE 699
F + W M+ L+ HP VL KAQAE+ A+AG + + D+P+L YL ++SE
Sbjct: 703 FMAATDTSSISSYWVMTELIRHPRVLHKAQAEVRAAAGGAPQVRISDMPKLKYLRMVLSE 524
Query: 698 TLRLYPVVPTLVPHESTADCTVGGHRVPSGTMLLVNVYAIHRDPAIWADPAAFRPERFED 519
T R++P LVP E+ +GG+ +P+ TML+VN +AI RDPA W DP F PERFE+
Sbjct: 523 TFRMHPPATMLVPRETMRPIRLGGYDIPANTMLMVNAWAIGRDPASWKDPEVFYPERFEE 344
Score = 46.4 bits (95), Expect(2) = 2e-038
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = -2 / -1
Query: 497 VMPFGMGRRKCPGEALALRTLGLVLGTLIQCFDW 396
++PFG GRR CPG A+ + +L L+ CF+W
Sbjct: 310 LLPFGAGRRICPGLAMGVANTEFILANLLYCFNW 209
>gb|AV917230.1|AV917230 AV917230 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags18a18 5', mRNA sequence
Length = 619
Score = 133 bits (284), Expect(2) = 2e-038
Identities = 53/120 (44%), Positives = 74/120 (61%)
Frame = -2 / +3
Query: 878 FAGGSXXXXXXXEWAMSLLLSHPDVLEKAQAEIDASAGHSRLLGADDLPRLGYLHCIVSE 699
F + W M+ L+ HP VL KAQAE+ A+AG + + D+P+L YL ++SE
Sbjct: 15 FMAATDTSSISSYWVMTELIRHPRVLHKAQAEVRAAAGGAPQVRISDMPKLKYLRMVLSE 194
Query: 698 TLRLYPVVPTLVPHESTADCTVGGHRVPSGTMLLVNVYAIHRDPAIWADPAAFRPERFED 519
T R++P LVP E+ +GG+ +P+ TML+VN +AI RDPA W DP F PERFE+
Sbjct: 195 TFRMHPPATMLVPRETMRPIRLGGYDIPANTMLMVNAWAIGRDPASWKDPEVFYPERFEE 374
Score = 46.4 bits (95), Expect(2) = 2e-038
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = -2 / +3
Query: 497 VMPFGMGRRKCPGEALALRTLGLVLGTLIQCFDW 396
++PFG GRR CPG A+ + +L L+ CF+W
Sbjct: 408 LLPFGAGRRICPGLAMGVANTEFILANLLYCFNW 509
>gb|BQ471267.1|BQ471267 HV01P03T HV Hordeum vulgare subsp. vulgare cDNA clone HV01P03
5-PRIME, mRNA sequence
Length = 610
Score = 133 bits (284), Expect(2) = 2e-038
Identities = 53/120 (44%), Positives = 74/120 (61%)
Frame = -2 / +2
Query: 878 FAGGSXXXXXXXEWAMSLLLSHPDVLEKAQAEIDASAGHSRLLGADDLPRLGYLHCIVSE 699
F + W M+ L+ HP VL KAQAE+ A+AG + + D+P+L YL ++SE
Sbjct: 44 FMAATDTSSISSYWVMTELIRHPRVLHKAQAEVRAAAGGAPQVRISDMPKLKYLRMVLSE 223
Query: 698 TLRLYPVVPTLVPHESTADCTVGGHRVPSGTMLLVNVYAIHRDPAIWADPAAFRPERFED 519
T R++P LVP E+ +GG+ +P+ TML+VN +AI RDPA W DP F PERFE+
Sbjct: 224 TFRMHPPATMLVPRETMRPIRLGGYDIPANTMLMVNAWAIGRDPASWKDPEVFYPERFEE 403
Score = 46.4 bits (95), Expect(2) = 2e-038
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = -2 / +2
Query: 497 VMPFGMGRRKCPGEALALRTLGLVLGTLIQCFDW 396
++PFG GRR CPG A+ + +L L+ CF+W
Sbjct: 437 LLPFGAGRRICPGLAMGVANTEFILANLLYCFNW 538
>gb|BJ464883.1|BJ464883 BJ464883 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags36h03 5', mRNA sequence
Length = 582
Score = 133 bits (284), Expect(2) = 2e-038
Identities = 53/120 (44%), Positives = 74/120 (61%)
Frame = -2 / +3
Query: 878 FAGGSXXXXXXXEWAMSLLLSHPDVLEKAQAEIDASAGHSRLLGADDLPRLGYLHCIVSE 699
F + W M+ L+ HP VL KAQAE+ A+AG + + D+P+L YL ++SE
Sbjct: 15 FMAATDTSSISSYWVMTELIRHPRVLHKAQAEVRAAAGGAPQVRISDMPKLKYLRMVLSE 194
Query: 698 TLRLYPVVPTLVPHESTADCTVGGHRVPSGTMLLVNVYAIHRDPAIWADPAAFRPERFED 519
T R++P LVP E+ +GG+ +P+ TML+VN +AI RDPA W DP F PERFE+
Sbjct: 195 TFRMHPPATMLVPRETMRPIRLGGYDIPANTMLMVNAWAIGRDPASWKDPEVFYPERFEE 374
Score = 46.4 bits (95), Expect(2) = 2e-038
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = -2 / +3
Query: 497 VMPFGMGRRKCPGEALALRTLGLVLGTLIQCFDW 396
++PFG GRR CPG A+ + +L L+ CF+W
Sbjct: 408 LLPFGAGRRICPGLAMGVANTEFILANLLYCFNW 509
>gb|BJ466813.1|BJ466813 BJ466813 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags34b17 3', mRNA sequence
Length = 729
Score = 131 bits (281), Expect(2) = 6e-038
Identities = 52/107 (48%), Positives = 72/107 (67%)
Frame = -2 / -1
Query: 839 WAMSLLLSHPDVLEKAQAEIDASAGHSRLLGADDLPRLGYLHCIVSETLRLYPVVPTLVP 660
W M+ L+ HP VL KAQAE+ A+AG + + D+P+L YL ++SET R++P LVP
Sbjct: 693 WVMTELIRHPRVLHKAQAEVRAAAGGAPQVRISDMPKLKYLRMVLSETFRMHPPATMLVP 514
Query: 659 HESTADCTVGGHRVPSGTMLLVNVYAIHRDPAIWADPAAFRPERFED 519
E+ +GG+ +P+ TML+VN +AI RDPA W DP F PERFE+
Sbjct: 513 RETMRPIRLGGYDIPANTMLMVNAWAIGRDPASWKDPEVFYPERFEE 373
Score = 46.4 bits (95), Expect(2) = 6e-038
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = -2 / -1
Query: 497 VMPFGMGRRKCPGEALALRTLGLVLGTLIQCFDW 396
++PFG GRR CPG A+ + +L L+ CF+W
Sbjct: 339 LLPFGAGRRICPGLAMGVANTEFILANLLYCFNW 238
>gb|BI956493.1|BI956493 HVSMEn0003M04f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0003M04f, mRNA sequence
Length = 942
Score = 156 bits (335), Expect = 2e-037
Identities = 62/143 (43%), Positives = 89/143 (62%)
Frame = -2 / +2
Query: 944 SLQKSEPEVYTDTMIMALCSSMFAGGSXXXXXXXEWAMSLLLSHPDVLEKAQAEIDASAG 765
SL E + TDT + AL ++F G+ EWA++ L+ HPD+L++A E+DA G
Sbjct: 23 SLTGGEEDKITDTDVKALILNLFVAGTETTSTIVEWAVAELIRHPDMLKRAHEELDAVVG 202
Query: 764 HSRLLGADDLPRLGYLHCIVSETLRLYPVVPTLVPHESTADCTVGGHRVPSGTMLLVNVY 585
+L+ DLPRL +L ++ ET RL+P P +P ++ +C V G+R+P GT LLVNV+
Sbjct: 203 RDKLVAESDLPRLAFLGAVIKETFRLHPSTPLSLPRMASQECEVAGYRIPKGTELLVNVW 382
Query: 584 AIHRDPAIWADPAAFRPERFEDG 516
I RDPA+W DP F+P RF G
Sbjct: 383 GITRDPALWPDPLEFQPARFLPG 451
>gb|BJ449979.1|BJ449979 BJ449979 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak27i06 5', mRNA sequence
Length = 537
Score = 155 bits (333), Expect = 3e-037
Identities = 60/114 (52%), Positives = 78/114 (68%)
Frame = -2 / +2
Query: 623 RVPSGTMLLVNVYAIHRDPAIWADPAAFRPERFEDGRADGLFVMPFGMGRRKCPGEALAL 444
R GTM+LVN +AIHRD +W P FR ERF A + ++PFG+GRR+CPGE LA+
Sbjct: 2 RHEGGTMILVNAWAIHRDANVWDAPEEFRAERFLGRDAVAMPMLPFGLGRRRCPGEGLAM 181
Query: 443 RTLGLVLGTLIQCFDWDTVGGAEVDMAEGGGITLPRAVPLEAICKPRHAMLGVL 282
R + L L L+QCF+WD G +DMAEGGG+T+P A PL A+C+PR + VL
Sbjct: 182 RVVSLTLAALLQCFEWDVGDGDTIDMAEGGGLTMPMATPLAAVCRPREFVKSVL 343
>gb|BJ457397.1|BJ457397 BJ457397 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak27i06 3', mRNA sequence
Length = 498
Score = 155 bits (332), Expect = 5e-037
Identities = 59/110 (53%), Positives = 77/110 (70%)
Frame = -2 / -1
Query: 611 GTMLLVNVYAIHRDPAIWADPAAFRPERFEDGRADGLFVMPFGMGRRKCPGEALALRTLG 432
GTM+LVN +AIHRD +W P FR ERF A + ++PFG+GRR+CPGE LA+R +
Sbjct: 495 GTMILVNAWAIHRDANVWDAPEEFRAERFLGRDAVAMPMLPFGLGRRRCPGEGLAMRVVS 316
Query: 431 LVLGTLIQCFDWDTVGGAEVDMAEGGGITLPRAVPLEAICKPRHAMLGVL 282
L L L+QCF+WD G +DMAEGGG+T+P A PL A+C+PR + VL
Sbjct: 315 LTLAALLQCFEWDVGDGDTIDMAEGGGLTMPMATPLAAVCRPREFVKSVL 166
>gb|BJ545191.1|BJ545191 BJ545191 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak45m01 5', mRNA sequence
Length = 603
Score = 140 bits (300), Expect(2) = 2e-035
Identities = 57/133 (42%), Positives = 79/133 (59%)
Frame = -2 / +3
Query: 905 MIMALCSSMFAGGSXXXXXXXEWAMSLLLSHPDVLEKAQAEIDASAGHSRLLGADDLPRL 726
MI A+ +F GS +WAMS L+ +P+V+ KAQAE+ + + DDL L
Sbjct: 132 MIKAVILDLFGAGSETSATTLQWAMSELMRYPNVMLKAQAEVRNNLQGKSKVTEDDLANL 311
Query: 725 GYLHCIVSETLRLYPVVPTLVPHESTADCTVGGHRVPSGTMLLVNVYAIHRDPAIWADPA 546
YL ++ ET+RL+P P L+P E+ C + G+ +P GT +LVN +AI RDP W DP
Sbjct: 312 KYLRLVIKETMRLHPAAPLLLPREAMEACKILGYDIPEGTTVLVNAWAIGRDPKYWQDPE 491
Query: 545 AFRPERFEDGRAD 507
F+PERFE G D
Sbjct: 492 EFKPERFESGMVD 530
Score = 29.5 bits (58), Expect(2) = 2e-035
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -2 / +3
Query: 494 MPFGMGRRKCPGEALA 447
+PFG GRR CPG A
Sbjct: 555 IPFGAGRRMCPGMTFA 602
>gb|BJ546669.1|BJ546669 BJ546669 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak45m01 3', mRNA sequence
Length = 730
Score = 116 bits (249), Expect(2) = 1e-034
Identities = 46/103 (44%), Positives = 64/103 (62%)
Frame = -2 / -2
Query: 815 HPDVLEKAQAEIDASAGHSRLLGADDLPRLGYLHCIVSETLRLYPVVPTLVPHESTADCT 636
+P+V+ KAQAE+ + + DDL L YL ++ ET+RL+P P L+P E+ C
Sbjct: 726 YPNVMLKAQAEVRNNLQGKSKVTEDDLANLKYLRLVIKETMRLHPAAPLLLPREAMEACK 547
Query: 635 VGGHRVPSGTMLLVNVYAIHRDPAIWADPAAFRPERFEDGRAD 507
+ G+ +P GT +LVN +AI RDP W DP F+PERFE G D
Sbjct: 546 ILGYDIPEGTTVLVNAWAIGRDPKYWQDPEEFKPERFESGMVD 418
Score = 49.6 bits (102), Expect(2) = 1e-034
Identities = 18/42 (42%), Positives = 26/42 (61%)
Frame = -2 / -2
Query: 494 MPFGMGRRKCPGEALALRTLGLVLGTLIQCFDWDTVGGAEVD 369
+PFG GRR CPG A ++ +VL +L+ FDW+ G + D
Sbjct: 393 IPFGAGRRMCPGMTFAQASMEIVLASLLYHFDWELPSGVKPD 268
>gb|AV922397.1|AV922397 AV922397 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags18a18 3', mRNA sequence
Length = 718
Score = 120 bits (256), Expect(2) = 1e-034
Identities = 48/99 (48%), Positives = 66/99 (66%)
Frame = -2 / -2
Query: 815 HPDVLEKAQAEIDASAGHSRLLGADDLPRLGYLHCIVSETLRLYPVVPTLVPHESTADCT 636
HP VL KAQA + A+AG + + D+P+L YL ++SET R++P LVP E+
Sbjct: 717 HPRVLHKAQAXVRAAAGGAPQVRISDMPKLKYLRMVLSETFRMHPPATMLVPRETMRPIR 538
Query: 635 VGGHRVPSGTMLLVNVYAIHRDPAIWADPAAFRPERFED 519
+GG+ +P+ TML+VN +AI RDPA W DP F PERFE+
Sbjct: 537 LGGYDIPANTMLMVNAWAIGRDPASWKDPEVFYPERFEE 421
Score = 46.4 bits (95), Expect(2) = 1e-034
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = -2 / -2
Query: 497 VMPFGMGRRKCPGEALALRTLGLVLGTLIQCFDW 396
++PFG GRR CPG A+ + +L L+ CF+W
Sbjct: 387 LLPFGAGRRICPGLAMGVANTEFILANLLYCFNW 286
>gb|BJ466913.1|BJ466913 BJ466913 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags35a04 3', mRNA sequence
Length = 719
Score = 120 bits (256), Expect(2) = 1e-034
Identities = 48/99 (48%), Positives = 66/99 (66%)
Frame = -2 / -2
Query: 815 HPDVLEKAQAEIDASAGHSRLLGADDLPRLGYLHCIVSETLRLYPVVPTLVPHESTADCT 636
HP VL KAQA + A+AG + + D+P+L YL ++SET R++P LVP E+
Sbjct: 718 HPRVLHKAQAXVRAAAGGAPQVRISDMPKLKYLRMVLSETFRMHPPATMLVPRETMRPIR 539
Query: 635 VGGHRVPSGTMLLVNVYAIHRDPAIWADPAAFRPERFED 519
+GG+ +P+ TML+VN +AI RDPA W DP F PERFE+
Sbjct: 538 LGGYDIPANTMLMVNAWAIGRDPASWKDPEVFYPERFEE 422
Score = 46.4 bits (95), Expect(2) = 1e-034
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = -2 / -2
Query: 497 VMPFGMGRRKCPGEALALRTLGLVLGTLIQCFDW 396
++PFG GRR CPG A+ + +L L+ CF+W
Sbjct: 388 LLPFGAGRRICPGLAMGVANTEFILANLLYCFNW 287
>gb|BF629412.3|BF629412 HVSMEb0012D18f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0012D18f, mRNA sequence
Length = 846
Score = 128 bits (274), Expect(2) = 5e-034
Identities = 52/120 (43%), Positives = 73/120 (60%)
Frame = -2 / +2
Query: 878 FAGGSXXXXXXXEWAMSLLLSHPDVLEKAQAEIDASAGHSRLLGADDLPRLGYLHCIVSE 699
F + W M+ L+ HP VL KAQAE+ A+AG + + D+P+L YL ++SE
Sbjct: 173 FMAATDTSSISSYWVMTELIRHPRVLHKAQAEVRAAAGGAPQVRISDMPKLKYLRMVLSE 352
Query: 698 TLRLYPVVPTLVPHESTADCTVGGHRVPSGTMLLVNVYAIHRDPAIWADPAAFRPERFED 519
T R++P LVP E+ +GG+ +P+ TML+VN +AI RDPA W DP F ERFE+
Sbjct: 353 TFRMHPPATMLVPRETMRPIRLGGYDIPANTMLMVNAWAIGRDPASWKDPEVFYLERFEE 532
Score = 36.3 bits (73), Expect(2) = 5e-034
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = -2 / +2
Query: 497 VMPFGMGRRKCPGEALALRTLGLVLGTLIQCFDWDTVGG 381
++PF GRR CP A+ + +L L+ C +W G
Sbjct: 566 LLPFXAGRRICPVLAMGVANTEFILXNLLYCLNWAPPSG 682
>gb|BQ664508.1|BQ664508 HV03K07u HV Hordeum vulgare subsp. vulgare cDNA clone HV03K07
3-PRIME, mRNA sequence
Length = 443
Score = 144 bits (310), Expect = 5e-034
Identities = 55/79 (69%), Positives = 67/79 (84%)
Frame = -2 / -2
Query: 500 FVMPFGMGRRKCPGEALALRTLGLVLGTLIQCFDWDTVGGAEVDMAEGGGITLPRAVPLE 321
F++PFGMGRR+CPGE LALRT+G+VL TL+QCFDWD V G EVDM E GG+T+P+AVPLE
Sbjct: 442 FMIPFGMGRRRCPGETLALRTIGMVLATLVQCFDWDRVDGKEVDMTESGGLTIPKAVPLE 263
Query: 320 AICKPRHAMLGVLKGL*AP 264
A+C+PR AM VL+ L* P
Sbjct: 262 AVCRPRPAMRDVLQSL*WP 206
>gb|BJ463386.1|BJ463386 BJ463386 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags27g14 5', mRNA sequence
Length = 528
Score = 133 bits (284), Expect(2) = 5e-033
Identities = 53/120 (44%), Positives = 74/120 (61%)
Frame = -2 / +2
Query: 878 FAGGSXXXXXXXEWAMSLLLSHPDVLEKAQAEIDASAGHSRLLGADDLPRLGYLHCIVSE 699
F + W M+ L+ HP VL KAQAE+ A+AG + + D+P+L YL ++SE
Sbjct: 92 FMAATDTSSISSYWVMTELIRHPRVLHKAQAEVRAAAGGAPQVRISDMPKLKYLRMVLSE 271
Query: 698 TLRLYPVVPTLVPHESTADCTVGGHRVPSGTMLLVNVYAIHRDPAIWADPAAFRPERFED 519
T R++P LVP E+ +GG+ +P+ TML+VN +AI RDPA W DP F PERFE+
Sbjct: 272 TFRMHPPATMLVPRETMRPIRLGGYDIPANTMLMVNAWAIGRDPASWKDPEVFYPERFEE 451
Score = 28.6 bits (56), Expect(2) = 5e-033
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = -2 / +2
Query: 497 VMPFGMGRRKCPG 459
++PFG GRR CPG
Sbjct: 485 LLPFGAGRRICPG 523
>gb|BF628635.2|BF628635 HVSMEb0006N15f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0006N15f, mRNA sequence
Length = 710
Score = 95.0 bits (201), Expect(3) = 6e-033
Identities = 38/76 (50%), Positives = 47/76 (61%)
Frame = -2 / +2
Query: 743 DDLPRLGYLHCIVSETLRLYPVVPTLVPHESTADCTVGGHRVPSGTMLLVNVYAIHRDPA 564
DDL L YL ++ ETLRL+ P LVPH + ADC + G+ +PSGT ++VN AI RDP
Sbjct: 329 DDLNHLAYLKAVIKETLRLHMPAPLLVPHLAMADCVINGYTIPSGTRVIVNSRAIARDPN 508
Query: 563 IWADPAAFRPERFEDG 516
W F PERF G
Sbjct: 509 SWESAEEFLPERFMQG 556
Score = 48.7 bits (100), Expect(3) = 6e-033
Identities = 18/42 (42%), Positives = 26/42 (61%)
Frame = -2 / +2
Query: 521 DGRADGLFVMPFGMGRRKCPGEALALRTLGLVLGTLIQCFDW 396
D + +G +PFG GRR CPG LA+ + ++L L+ FDW
Sbjct: 575 DYKGNGFLYLPFGTGRRICPGINLAIGAIEIMLTNLVYHFDW 700
Score = 35.4 bits (71), Expect(3) = 6e-033
Identities = 17/59 (28%), Positives = 30/59 (50%)
Frame = -2 / +2
Query: 914 TDTMIMALCSSMFAGGSXXXXXXXEWAMSLLLSHPDVLEKAQAEIDASAGHSRLLGADD 738
T + A MF G+ E+AM+ L+ +PD++ K QAE+ +S + + +D
Sbjct: 155 TREQVKAQLVIMFGAGTDTSYIVMEYAMARLMQNPDLMTKLQAEVRSSIPKGKHMVTED 331
>gb|BG415142.2|BG415142 HVSMEk0005E23f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0005E23f, mRNA sequence
Length = 922
Score = 126 bits (269), Expect(2) = 9e-033
Identities = 50/129 (38%), Positives = 74/129 (57%)
Frame = -2 / +3
Query: 914 TDTMIMALCSSMFAGGSXXXXXXXEWAMSLLLSHPDVLEKAQAEIDASAGHSRLLGADDL 735
+D + L M G EWAM+ L+ +P V +K Q E+D G R++ D
Sbjct: 48 SDDTVFGLLWDMITAGMDTTVISVEWAMAELVRNPRVQQKLQEELDNVVGRDRVMAETDF 227
Query: 734 PRLGYLHCIVSETLRLYPVVPTLVPHESTADCTVGGHRVPSGTMLLVNVYAIHRDPAIWA 555
L YL +V E+LRL+P P ++PH+++A VGG+ +P G ++VNV+A+ RDP +W
Sbjct: 228 QNLPYLMDVVKESLRLHPPTPLMLPHKASASVKVGGYNIPKGANVMVNVWAVARDPKVWT 407
Query: 554 DPAAFRPER 528
P FRPER
Sbjct: 408 SPLEFRPER 434
Score = 34.5 bits (69), Expect(2) = 9e-033
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = -2 / +3
Query: 497 VMPFGMGRRKCPGEALALRTLGLVLGTLI 411
V+PFG GRR CPG + + ++G ++
Sbjct: 477 VLPFGAGRRVCPGAHFGINLVASMIGPML 563
>gb|CA000465.1|CA000465 HS08E18u HS Hordeum vulgare subsp. vulgare cDNA clone HS08E18
3-PRIME, mRNA sequence
Length = 492
Score = 140 bits (301), Expect = 9e-033
Identities = 53/77 (68%), Positives = 66/77 (85%)
Frame = -2 / -1
Query: 497 VMPFGMGRRKCPGEALALRTLGLVLGTLIQCFDWDTVGGAEVDMAEGGGITLPRAVPLEA 318
++PFGMGRR+CPGE LALRT+G+VL TL+QCFDWD V G EVDM E GG+T+P+AVPLEA
Sbjct: 492 MIPFGMGRRRCPGETLALRTIGMVLATLVQCFDWDRVDGKEVDMTESGGLTIPKAVPLEA 313
Query: 317 ICKPRHAMLGVLKGL*A 267
+C+PR AM VL+ L*+
Sbjct: 312 VCRPRPAMRDVLQSL*S 262
>gb|AV921112.1|AV921112 AV921112 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags1a14 3', mRNA sequence
Length = 746
Score = 96.4 bits (204), Expect(3) = 2e-032
Identities = 38/76 (50%), Positives = 48/76 (63%)
Frame = -2 / -1
Query: 743 DDLPRLGYLHCIVSETLRLYPVVPTLVPHESTADCTVGGHRVPSGTMLLVNVYAIHRDPA 564
DDL L YL ++ ETLRL+ P LVPH + ADC + G+ +PSGT ++VN AI RDP+
Sbjct: 608 DDLNHLAYLKAVIKETLRLHMPAPLLVPHLAMADCVINGYTIPSGTRVIVNSRAIARDPS 429
Query: 563 IWADPAAFRPERFEDG 516
W F PERF G
Sbjct: 428 SWESAEEFLPERFMQG 381
Score = 48.7 bits (100), Expect(3) = 2e-032
Identities = 18/48 (37%), Positives = 27/48 (56%)
Frame = -2 / -1
Query: 521 DGRADGLFVMPFGMGRRKCPGEALALRTLGLVLGTLIQCFDWDTVGGA 378
D + +G +PFG GRR CPG A+ + ++L L+ FDW G+
Sbjct: 362 DYKGNGFLYLPFGTGRRICPGINFAIAAIEIMLANLVYHFDWKLPPGS 219
Score = 32.2 bits (64), Expect(3) = 2e-032
Identities = 14/47 (29%), Positives = 26/47 (55%)
Frame = -2 / -1
Query: 878 FAGGSXXXXXXXEWAMSLLLSHPDVLEKAQAEIDASAGHSRLLGADD 738
F G+ E+AM+ L+ +PD++ K QAE+ +S + + +D
Sbjct: 746 FXAGTDTSYIVMEYAMARLMQNPDLMTKLQAEVRSSIPKGKHMVIED 606
>gb|BI960513.1|BI960513 HVSMEn0024N22f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0024N22f, mRNA sequence
Length = 653
Score = 115 bits (246), Expect(2) = 4e-032
Identities = 43/103 (41%), Positives = 65/103 (63%)
Frame = -2 / +2
Query: 815 HPDVLEKAQAEIDASAGHSRLLGADDLPRLGYLHCIVSETLRLYPVVPTLVPHESTADCT 636
+P V +K Q E+D G R++ D L YL +V E+LRL+P P ++PH+++A
Sbjct: 5 NPXVQQKLQEELDNVVGRDRVMAETDFQNLPYLMAVVKESLRLHPPTPLMLPHKASASVK 184
Query: 635 VGGHRVPSGTMLLVNVYAIHRDPAIWADPAAFRPERFEDGRAD 507
VGG+ +P G ++VNV+A+ RDP +W+ P FRPERF + D
Sbjct: 185 VGGYNIPKGANVMVNVWAVARDPKVWSSPLEFRPERFLEESID 313
Score = 42.8 bits (87), Expect(2) = 4e-032
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = -2 / +2
Query: 497 VMPFGMGRRKCPGEALALRTLGLVLGTLIQCFDWDTVGG 381
V+PFG GRR CPG L + + ++G ++ F W G
Sbjct: 335 VLPFGAGRRVCPGAQLGINLVASMIGHMLHHFKWSLPEG 451
>gb|BU999462.1|BU999462 HI14J11r HI Hordeum vulgare subsp. vulgare cDNA clone HI14J11
5-PRIME, mRNA sequence
Length = 595
Score = 116 bits (249), Expect(3) = 5e-032
Identities = 48/109 (44%), Positives = 65/109 (59%)
Frame = -2 / +2
Query: 878 FAGGSXXXXXXXEWAMSLLLSHPDVLEKAQAEIDASAGHSRLLGADDLPRLGYLHCIVSE 699
F GG+ WAM+ L+ HP VL K Q EI A G S + DD+P+L YL +V E
Sbjct: 14 FIGGNHTSSVTINWAMTELIRHPRVLSKVQGEIRAVGGRSDRMQHDDMPKLQYLRMVVKE 193
Query: 698 TLRLYPVVPTLVPHESTADCTVGGHRVPSGTMLLVNVYAIHRDPAIWAD 552
TLRL+P LVP E+ V G+ +P+ T ++VN +AI RDP++W D
Sbjct: 194 TLRLHPPATLLVPRETIRRIQVAGYDIPAKTKIIVNTWAIGRDPSVWRD 340
Score = 34.5 bits (69), Expect(3) = 5e-032
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = -2 / +2
Query: 497 VMPFGMGRRKCPGEALALRT 438
++PFG GRR CPG A+A+ T
Sbjct: 410 LLPFGTGRRVCPGLAMAVST 469
Score = 24.4 bits (47), Expect(3) = 5e-032
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -2 / +2
Query: 554 DPAAFRPERFEDGRAD 507
DP F PERF+D D
Sbjct: 341 DPEEFYPERFQDTDID 388
>gb|BG416486.2|BG416486 HVSMEk0012I14f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0012I14f, mRNA sequence
Length = 898
Score = 137 bits (293), Expect = 1e-031
Identities = 56/133 (42%), Positives = 79/133 (59%)
Frame = -2 / +2
Query: 905 MIMALCSSMFAGGSXXXXXXXEWAMSLLLSHPDVLEKAQAEIDASAGHSRLLGADDLPRL 726
M+ + +F GS +WAMS L+ +P+V+ KAQAE+ + + + DDL L
Sbjct: 53 MVKGVILDLFGAGSETSATTLQWAMSELMRNPNVMRKAQAEVRDNLQNKPKVTEDDLVNL 232
Query: 725 GYLHCIVSETLRLYPVVPTLVPHESTADCTVGGHRVPSGTMLLVNVYAIHRDPAIWADPA 546
YL ++ ET+RL+P P L+P E+ C + G+ VP GT +LVN +AI RDP W DP
Sbjct: 233 KYLKLVIKETMRLHPAAPLLLPREAREPCKILGYDVPKGTTVLVNAWAIGRDPKHWKDPE 412
Query: 545 AFRPERFEDGRAD 507
F+PERFE G D
Sbjct: 413 DFKPERFEFGTVD 451
>gb|BG299631.1|BG299631 HVSMEa0021C22f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0021C22f, mRNA sequence
Length = 817
Score = 136 bits (292), Expect = 2e-031
Identities = 59/105 (56%), Positives = 74/105 (70%)
Frame = -2 / +2
Query: 944 SLQKSEPEVYTDTMIMALCSSMFAGGSXXXXXXXEWAMSLLLSHPDVLEKAQAEIDASAG 765
++QK+EPEVYTDTMI ALC+++F G+ EWAMSLLL+HP L KAQAEIDA+ G
Sbjct: 356 TMQKTEPEVYTDTMITALCANLFGAGTETTSTTTEWAMSLLLNHPAALRKAQAEIDAAVG 535
Query: 764 HSRLLGADDLPRLGYLHCIVSETLRLYPVVPTLVPHESTADCTVG 630
SR++ ADD+PRL YL CI S+TL LYP LV + +C G
Sbjct: 536 TSRVVTADDVPRLVYLQCIGSKTLALYPCGAQLVAYLYFLNCKRG 670
>gb|BF627303.3|BF627303 HVSMEb0004I01f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0004I01f, mRNA sequence
Length = 741
Score = 109 bits (232), Expect(2) = 3e-031
Identities = 43/91 (47%), Positives = 61/91 (67%)
Frame = -2 / +2
Query: 791 QAEIDASAGHSRLLGADDLPRLGYLHCIVSETLRLYPVVPTLVPHESTADCTVGGHRVPS 612
QAE+ A+AG + + D+P+L YL ++SET R++P LVP E+ +GG+ +P+
Sbjct: 2 QAEVRAAAGGAPQVRISDMPKLKYLRMVLSETFRMHPPATMLVPRETMRPIRLGGYDIPA 181
Query: 611 GTMLLVNVYAIHRDPAIWADPAAFRPERFED 519
TML+VN +AI RDPA W DP F PERFE+
Sbjct: 182 NTMLMVNAWAIGRDPASWKDPEVFYPERFEE 274
Score = 46.4 bits (95), Expect(2) = 3e-031
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = -2 / +2
Query: 497 VMPFGMGRRKCPGEALALRTLGLVLGTLIQCFDW 396
++PFG GRR CPG A+ + +L L+ CF+W
Sbjct: 308 LLPFGAGRRICPGLAMGVANTEFILANLLYCFNW 409
>gb|CA019349.1|CA019349 HV11L11r HV Hordeum vulgare subsp. vulgare cDNA clone HV11L11
5-PRIME, mRNA sequence
Length = 495
Score = 133 bits (284), Expect = 2e-030
Identities = 53/120 (44%), Positives = 74/120 (61%)
Frame = -2 / +3
Query: 878 FAGGSXXXXXXXEWAMSLLLSHPDVLEKAQAEIDASAGHSRLLGADDLPRLGYLHCIVSE 699
F + W M+ L+ HP VL KAQAE+ A+AG + + D+P+L YL ++SE
Sbjct: 84 FMAATDTSSISSYWVMTELIRHPRVLHKAQAEVRAAAGGAPQVRISDMPKLKYLRMVLSE 263
Query: 698 TLRLYPVVPTLVPHESTADCTVGGHRVPSGTMLLVNVYAIHRDPAIWADPAAFRPERFED 519
T R++P LVP E+ +GG+ +P+ TML+VN +AI RDPA W DP F PERFE+
Sbjct: 264 TFRMHPPATMLVPRETMRPIRLGGYDIPANTMLMVNAWAIGRDPASWKDPEVFYPERFEE 443
>gb|BE215637.1|BE215637 HV_CEb0007H18f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0007H18f, mRNA sequence
Length = 531
Score = 124 bits (265), Expect(2) = 5e-030
Identities = 56/137 (40%), Positives = 73/137 (53%)
Frame = -2 / +3
Query: 917 YTDTMIMALCSSMFAGGSXXXXXXXEWAMSLLLSHPDVLEKAQAEIDASAGHSRLLGADD 738
+T I L +F+ GS WAMS L+ +P + KAQAE+ + + DD
Sbjct: 27 FTMGAIKCLLVDLFSAGSETSATTLAWAMSELMRNPGAMAKAQAEVRNNLQGKPRVTEDD 206
Query: 737 LPRLGYLHCIVSETLRLYPVVPTLVPHESTADCTVGGHRVPSGTMLLVNVYAIHRDPAIW 558
L L Y+ ++ ETLRL+ VP L+P E T C V G+ VP G + VN +AI RDP W
Sbjct: 207 LADLKYMRLVIKETLRLHTSVPLLLPREPTEACKVLGYDVPKGATVFVNAWAICRDPKHW 386
Query: 557 ADPAAFRPERFEDGRAD 507
FRPERFE G D
Sbjct: 387 DAAEEFRPERFESGEVD 437
Score = 27.2 bits (53), Expect(2) = 5e-030
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -2 / +3
Query: 491 PFGMGRRKCPG 459
PFG GRR CPG
Sbjct: 465 PFGAGRRICPG 497
>gb|BI776301.2|BI776301 EBem04_SQ001_H10_R embryo, 12 DPA, no treatment, cv Optic, EBem04
Hordeum vulgare subsp. vulgare cDNA clone
EBem04_SQ001_H10 5', mRNA sequence
Length = 537
Score = 131 bits (280), Expect = 7e-030
Identities = 52/136 (38%), Positives = 78/136 (57%)
Frame = -2 / +1
Query: 914 TDTMIMALCSSMFAGGSXXXXXXXEWAMSLLLSHPDVLEKAQAEIDASAGHSRLLGADDL 735
+D + L M G EWAM+ L+ +P V +K Q E+D G R++ D
Sbjct: 112 SDDTVFGLLWDMITAGMDTTVISVEWAMAELVRNPRVQQKLQEELDNVVGRDRVMAETDF 291
Query: 734 PRLGYLHCIVSETLRLYPVVPTLVPHESTADCTVGGHRVPSGTMLLVNVYAIHRDPAIWA 555
L YL +V E+LRL+P P ++PH+++A VGG+ +P G ++VNV+A+ RDP +W+
Sbjct: 292 QNLPYLMAVVKESLRLHPPTPLMLPHKASASVKVGGYNIPKGANVMVNVWAVARDPKVWS 471
Query: 554 DPAAFRPERFEDGRAD 507
P FRPERF + D
Sbjct: 472 SPLEFRPERFLEESID 519
>gb|AV915997.1|AV915997 AV915997 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags1a14 5', mRNA sequence
Length = 606
Score = 96.4 bits (204), Expect(3) = 2e-029
Identities = 38/76 (50%), Positives = 48/76 (63%)
Frame = -2 / +3
Query: 743 DDLPRLGYLHCIVSETLRLYPVVPTLVPHESTADCTVGGHRVPSGTMLLVNVYAIHRDPA 564
DDL L YL ++ ETLRL+ P LVPH + ADC + G+ +PSGT ++VN AI RDP+
Sbjct: 249 DDLNHLAYLKAVIKETLRLHMPAPLLVPHLAMADCVINGYTIPSGTRVIVNSRAIARDPS 428
Query: 563 IWADPAAFRPERFEDG 516
W F PERF G
Sbjct: 429 SWESAEEFLPERFMQG 476
Score = 35.9 bits (72), Expect(3) = 2e-029
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -2 / +3
Query: 521 DGRADGLFVMPFGMGRRKCPGEALALRTLGLVLGTL 414
D + +G +PFG GRR CPG + + ++L L
Sbjct: 495 DYKGNGFLYLPFGTGRRICPGINFXIAXIEIMLXNL 602
Score = 35.0 bits (70), Expect(3) = 2e-029
Identities = 17/59 (28%), Positives = 30/59 (50%)
Frame = -2 / +3
Query: 914 TDTMIMALCSSMFAGGSXXXXXXXEWAMSLLLSHPDVLEKAQAEIDASAGHSRLLGADD 738
T + A MF G+ E+AM+ L+ +PD++ K QAE+ +S + + +D
Sbjct: 75 TREQVKAQLVIMFGAGTDTSYIVMEYAMARLMQNPDLMTKLQAEVRSSIPKGKHMVIED 251
>gb|BF253422.2|BF253422 HVSMEf0001G02f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0001G02f, mRNA sequence
Length = 617
Score = 129 bits (276), Expect = 3e-029
Identities = 51/136 (37%), Positives = 78/136 (57%)
Frame = -2 / +1
Query: 914 TDTMIMALCSSMFAGGSXXXXXXXEWAMSLLLSHPDVLEKAQAEIDASAGHSRLLGADDL 735
+D + L M G EWAM+ L+ +P V +K Q E+D G R++ D
Sbjct: 169 SDDTVFGLLWDMITAGMDTTVISVEWAMAELVRNPRVQQKLQEELDNVVGRDRVMAETDF 348
Query: 734 PRLGYLHCIVSETLRLYPVVPTLVPHESTADCTVGGHRVPSGTMLLVNVYAIHRDPAIWA 555
L YL +V E+LRL+P P ++PH+++A VGG+ +P G ++VNV+A+ RDP +W+
Sbjct: 349 QNLPYLMAVVKESLRLHPPTPLMLPHKASASVKVGGYNIPKGANVMVNVWAVARDPNVWS 528
Query: 554 DPAAFRPERFEDGRAD 507
P F+PERF + D
Sbjct: 529 SPLEFKPERFLEESID 576
>gb|BE519743.1|BE519743 HV_CEb0021A21f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0021A21f, mRNA sequence
Length = 627
Score = 63.8 bits (133), Expect(3) = 3e-029
Identities = 24/52 (46%), Positives = 36/52 (69%)
Frame = -2 / +2
Query: 680 VVPTLVPHESTADCTVGGHRVPSGTMLLVNVYAIHRDPAIWADPAAFRPERF 525
+V LVP ++ AD V G+R+P GT +++N +AI+R+ W+DP F PERF
Sbjct: 179 MVVPLVPRKAEADIEVNGYRIPKGTNVILNAWAINRNADAWSDPDKFVPERF 334
Score = 52.4 bits (108), Expect(3) = 3e-029
Identities = 18/35 (51%), Positives = 27/35 (77%)
Frame = -2 / +2
Query: 497 VMPFGMGRRKCPGEALALRTLGLVLGTLIQCFDWD 393
++PFG+GRR CPG LA + + L+LGTL+ F+W+
Sbjct: 389 MIPFGLGRRICPGMPLAQKLIPLILGTLLHRFEWE 493
Score = 50.6 bits (104), Expect(3) = 3e-029
Identities = 22/56 (39%), Positives = 30/56 (53%)
Frame = -2 / +2
Query: 839 WAMSLLLSHPDVLEKAQAEIDASAGHSRLLGADDLPRLGYLHCIVSETLRLYPVVP 672
W M LL +P+V+ K + E+ G L+ D+ RL YL + E LRL VVP
Sbjct: 23 WGMVDLLQNPEVMRKVKEELTTVLGEKPLMEESDIGRLPYLQAVAKEILRLRMVVP 190
>gb|AV936726.1|AV936726 AV936726 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal5k12 3', mRNA sequence
Length = 774
Score = 97.3 bits (206), Expect(3) = 7e-029
Identities = 36/79 (45%), Positives = 52/79 (65%)
Frame = -2 / -3
Query: 755 LLGADDLPRLGYLHCIVSETLRLYPVVPTLVPHESTADCTVGGHRVPSGTMLLVNVYAIH 576
++ D+ + YL ++ E+LRL+PV P L PH + ADC + G+ VP+GT ++VN +AI
Sbjct: 598 IISETDMNNMTYLRAVIKESLRLHPVAPLLAPHLAMADCIIDGYIVPAGTRVVVNAWAIG 419
Query: 575 RDPAIWADPAAFRPERFED 519
RDP+ W P F PERF D
Sbjct: 418 RDPSSWEYPEEFIPERFTD 362
Score = 45.1 bits (92), Expect(3) = 7e-029
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = -2 / -3
Query: 494 MPFGMGRRKCPGEALALRTLGLVLGTLIQCFDWD 393
+PFG GRR CPG L + + L+L L+ FDW+
Sbjct: 313 LPFGAGRRMCPGMNLGIANVELMLANLVCHFDWE 212
Score = 23.1 bits (44), Expect(3) = 7e-029
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -2 / -3
Query: 389 VGGAEVDMAEGGGITLPRAVPLEAICKPR 303
VG ++DM E G+T+ R L + K R
Sbjct: 199 VGRKDIDMTEVFGLTVRRKEKLLLVPKSR 113
>gb|AV936516.1|AV936516 AV936516 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal11k15 3', mRNA sequence
Length = 707
Score = 97.3 bits (206), Expect(3) = 7e-029
Identities = 36/79 (45%), Positives = 52/79 (65%)
Frame = -2 / -2
Query: 755 LLGADDLPRLGYLHCIVSETLRLYPVVPTLVPHESTADCTVGGHRVPSGTMLLVNVYAIH 576
++ D+ + YL ++ E+LRL+PV P L PH + ADC + G+ VP+GT ++VN +AI
Sbjct: 589 IISETDMNNMTYLRAVIKESLRLHPVAPLLAPHLAMADCIIDGYIVPAGTRVVVNAWAIG 410
Query: 575 RDPAIWADPAAFRPERFED 519
RDP+ W P F PERF D
Sbjct: 409 RDPSSWEYPEEFIPERFTD 353
Score = 45.1 bits (92), Expect(3) = 7e-029
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = -2 / -2
Query: 494 MPFGMGRRKCPGEALALRTLGLVLGTLIQCFDWD 393
+PFG GRR CPG L + + L+L L+ FDW+
Sbjct: 304 LPFGAGRRMCPGMNLGIANVELMLANLVCHFDWE 203
Score = 23.1 bits (44), Expect(3) = 7e-029
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -2 / -2
Query: 389 VGGAEVDMAEGGGITLPRAVPLEAICKPR 303
VG ++DM E G+T+ R L + K R
Sbjct: 190 VGRKDIDMTEVFGLTVRRKEKLLLVPKSR 104
>gb|BJ548975.1|BJ548975 BJ548975 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal40l11 3', mRNA sequence
Length = 696
Score = 97.3 bits (206), Expect(3) = 7e-029
Identities = 36/79 (45%), Positives = 52/79 (65%)
Frame = -2 / -1
Query: 755 LLGADDLPRLGYLHCIVSETLRLYPVVPTLVPHESTADCTVGGHRVPSGTMLLVNVYAIH 576
++ D+ + YL ++ E+LRL+PV P L PH + ADC + G+ VP+GT ++VN +AI
Sbjct: 582 IISETDMNNMTYLRAVIKESLRLHPVAPLLAPHLAMADCIIDGYIVPAGTRVVVNAWAIG 403
Query: 575 RDPAIWADPAAFRPERFED 519
RDP+ W P F PERF D
Sbjct: 402 RDPSSWEYPEEFIPERFTD 346
Score = 45.1 bits (92), Expect(3) = 7e-029
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = -2 / -1
Query: 494 MPFGMGRRKCPGEALALRTLGLVLGTLIQCFDWD 393
+PFG GRR CPG L + + L+L L+ FDW+
Sbjct: 297 LPFGAGRRMCPGMNLGIANVELMLANLVCHFDWE 196
Score = 23.1 bits (44), Expect(3) = 7e-029
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -2 / -1
Query: 389 VGGAEVDMAEGGGITLPRAVPLEAICKPR 303
VG ++DM E G+T+ R L + K R
Sbjct: 183 VGRKDIDMTEVFGLTVRRKEKLLLVPKSR 97
>gb|AV936356.1|AV936356 AV936356 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal11a15 3', mRNA sequence
Length = 683
Score = 97.3 bits (206), Expect(3) = 7e-029
Identities = 36/79 (45%), Positives = 52/79 (65%)
Frame = -2 / -2
Query: 755 LLGADDLPRLGYLHCIVSETLRLYPVVPTLVPHESTADCTVGGHRVPSGTMLLVNVYAIH 576
++ D+ + YL ++ E+LRL+PV P L PH + ADC + G+ VP+GT ++VN +AI
Sbjct: 568 IISETDMNNMTYLRAVIKESLRLHPVAPLLAPHLAMADCIIDGYIVPAGTRVVVNAWAIG 389
Query: 575 RDPAIWADPAAFRPERFED 519
RDP+ W P F PERF D
Sbjct: 388 RDPSSWEYPEEFIPERFTD 332
Score = 45.1 bits (92), Expect(3) = 7e-029
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = -2 / -2
Query: 494 MPFGMGRRKCPGEALALRTLGLVLGTLIQCFDWD 393
+PFG GRR CPG L + + L+L L+ FDW+
Sbjct: 283 LPFGAGRRMCPGMNLGIANVELMLANLVCHFDWE 182
Score = 23.1 bits (44), Expect(3) = 7e-029
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -2 / -2
Query: 389 VGGAEVDMAEGGGITLPRAVPLEAICKPR 303
VG ++DM E G+T+ R L + K R
Sbjct: 169 VGRKDIDMTEVFGLTVRRKEKLLLVPKSR 83
>gb|BJ548006.1|BJ548006 BJ548006 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal15n22 3', mRNA sequence
Length = 684
Score = 97.3 bits (206), Expect(3) = 7e-029
Identities = 36/79 (45%), Positives = 52/79 (65%)
Frame = -2 / -3
Query: 755 LLGADDLPRLGYLHCIVSETLRLYPVVPTLVPHESTADCTVGGHRVPSGTMLLVNVYAIH 576
++ D+ + YL ++ E+LRL+PV P L PH + ADC + G+ VP+GT ++VN +AI
Sbjct: 568 IISETDMNNMTYLRAVIKESLRLHPVAPLLAPHLAMADCIIDGYIVPAGTRVVVNAWAIG 389
Query: 575 RDPAIWADPAAFRPERFED 519
RDP+ W P F PERF D
Sbjct: 388 RDPSSWEYPEEFIPERFTD 332
Score = 45.1 bits (92), Expect(3) = 7e-029
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = -2 / -3
Query: 494 MPFGMGRRKCPGEALALRTLGLVLGTLIQCFDWD 393
+PFG GRR CPG L + + L+L L+ FDW+
Sbjct: 283 LPFGAGRRMCPGMNLGIANVELMLANLVCHFDWE 182
Score = 23.1 bits (44), Expect(3) = 7e-029
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -2 / -3
Query: 389 VGGAEVDMAEGGGITLPRAVPLEAICKPR 303
VG ++DM E G+T+ R L + K R
Sbjct: 169 VGRKDIDMTEVFGLTVRRKEKLLLVPKSR 83
>gb|AV936349.1|AV936349 AV936349 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal11a04 3', mRNA sequence
Length = 668
Score = 97.3 bits (206), Expect(3) = 7e-029
Identities = 36/79 (45%), Positives = 52/79 (65%)
Frame = -2 / -1
Query: 755 LLGADDLPRLGYLHCIVSETLRLYPVVPTLVPHESTADCTVGGHRVPSGTMLLVNVYAIH 576
++ D+ + YL ++ E+LRL+PV P L PH + ADC + G+ VP+GT ++VN +AI
Sbjct: 590 IISETDMNNMTYLRAVIKESLRLHPVAPLLAPHLAMADCIIDGYIVPAGTRVVVNAWAIG 411
Query: 575 RDPAIWADPAAFRPERFED 519
RDP+ W P F PERF D
Sbjct: 410 RDPSSWEYPEEFIPERFTD 354
Score = 45.1 bits (92), Expect(3) = 7e-029
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = -2 / -1
Query: 494 MPFGMGRRKCPGEALALRTLGLVLGTLIQCFDWD 393
+PFG GRR CPG L + + L+L L+ FDW+
Sbjct: 305 LPFGAGRRMCPGMNLGIANVELMLANLVCHFDWE 204
Score = 23.1 bits (44), Expect(3) = 7e-029
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -2 / -1
Query: 389 VGGAEVDMAEGGGITLPRAVPLEAICKPR 303
VG ++DM E G+T+ R L + K R
Sbjct: 191 VGRKDIDMTEVFGLTVRRKEKLLLVPKSR 105
>gb|BJ547960.1|BJ547960 BJ547960 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal12i23 3', mRNA sequence
Length = 669
Score = 97.3 bits (206), Expect(3) = 7e-029
Identities = 36/79 (45%), Positives = 52/79 (65%)
Frame = -2 / -3
Query: 755 LLGADDLPRLGYLHCIVSETLRLYPVVPTLVPHESTADCTVGGHRVPSGTMLLVNVYAIH 576
++ D+ + YL ++ E+LRL+PV P L PH + ADC + G+ VP+GT ++VN +AI
Sbjct: 595 IISETDMNNMTYLRAVIKESLRLHPVAPLLAPHLAMADCIIDGYIVPAGTRVVVNAWAIG 416
Query: 575 RDPAIWADPAAFRPERFED 519
RDP+ W P F PERF D
Sbjct: 415 RDPSSWEYPEEFIPERFTD 359
Score = 45.1 bits (92), Expect(3) = 7e-029
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = -2 / -3
Query: 494 MPFGMGRRKCPGEALALRTLGLVLGTLIQCFDWD 393
+PFG GRR CPG L + + L+L L+ FDW+
Sbjct: 310 LPFGAGRRMCPGMNLGIANVELMLANLVCHFDWE 209
Score = 23.1 bits (44), Expect(3) = 7e-029
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -2 / -3
Query: 389 VGGAEVDMAEGGGITLPRAVPLEAICKPR 303
VG ++DM E G+T+ R L + K R
Sbjct: 196 VGRKDIDMTEVFGLTVRRKEKLLLVPKSR 110
>gb|BJ548998.1|BJ548998 BJ548998 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal16j19 3', mRNA sequence
Length = 669
Score = 97.3 bits (206), Expect(3) = 7e-029
Identities = 36/79 (45%), Positives = 52/79 (65%)
Frame = -2 / -2
Query: 755 LLGADDLPRLGYLHCIVSETLRLYPVVPTLVPHESTADCTVGGHRVPSGTMLLVNVYAIH 576
++ D+ + YL ++ E+LRL+PV P L PH + ADC + G+ VP+GT ++VN +AI
Sbjct: 590 IISETDMNNMTYLRAVIKESLRLHPVAPLLAPHLAMADCIIDGYIVPAGTRVVVNAWAIG 411
Query: 575 RDPAIWADPAAFRPERFED 519
RDP+ W P F PERF D
Sbjct: 410 RDPSSWEYPEEFIPERFTD 354
Score = 45.1 bits (92), Expect(3) = 7e-029
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = -2 / -2
Query: 494 MPFGMGRRKCPGEALALRTLGLVLGTLIQCFDWD 393
+PFG GRR CPG L + + L+L L+ FDW+
Sbjct: 305 LPFGAGRRMCPGMNLGIANVELMLANLVCHFDWE 204
Score = 23.1 bits (44), Expect(3) = 7e-029
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -2 / -2
Query: 389 VGGAEVDMAEGGGITLPRAVPLEAICKPR 303
VG ++DM E G+T+ R L + K R
Sbjct: 191 VGRKDIDMTEVFGLTVRRKEKLLLVPKSR 105
>gb|BJ548386.1|BJ548386 BJ548386 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal24a03 3', mRNA sequence
Length = 645
Score = 97.3 bits (206), Expect(3) = 7e-029
Identities = 36/79 (45%), Positives = 52/79 (65%)
Frame = -2 / -2
Query: 755 LLGADDLPRLGYLHCIVSETLRLYPVVPTLVPHESTADCTVGGHRVPSGTMLLVNVYAIH 576
++ D+ + YL ++ E+LRL+PV P L PH + ADC + G+ VP+GT ++VN +AI
Sbjct: 569 IISETDMNNMTYLRAVIKESLRLHPVAPLLAPHLAMADCIIDGYIVPAGTRVVVNAWAIG 390
Query: 575 RDPAIWADPAAFRPERFED 519
RDP+ W P F PERF D
Sbjct: 389 RDPSSWEYPEEFIPERFTD 333
Score = 45.1 bits (92), Expect(3) = 7e-029
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = -2 / -2
Query: 494 MPFGMGRRKCPGEALALRTLGLVLGTLIQCFDWD 393
+PFG GRR CPG L + + L+L L+ FDW+
Sbjct: 284 LPFGAGRRMCPGMNLGIANVELMLANLVCHFDWE 183
Score = 23.1 bits (44), Expect(3) = 7e-029
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -2 / -2
Query: 389 VGGAEVDMAEGGGITLPRAVPLEAICKPR 303
VG ++DM E G+T+ R L + K R
Sbjct: 170 VGRKDIDMTEVFGLTVRRKEKLLLVPKSR 84
>gb|AV935198.1|AV935198 AV935198 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal3e02 3', mRNA sequence
Length = 597
Score = 97.3 bits (206), Expect(3) = 7e-029
Identities = 36/79 (45%), Positives = 52/79 (65%)
Frame = -2 / -3
Query: 755 LLGADDLPRLGYLHCIVSETLRLYPVVPTLVPHESTADCTVGGHRVPSGTMLLVNVYAIH 576
++ D+ + YL ++ E+LRL+PV P L PH + ADC + G+ VP+GT ++VN +AI
Sbjct: 589 IISETDMNNMTYLRAVIKESLRLHPVAPLLAPHLAMADCIIDGYIVPAGTRVVVNAWAIG 410
Query: 575 RDPAIWADPAAFRPERFED 519
RDP+ W P F PERF D
Sbjct: 409 RDPSSWEYPEEFIPERFTD 353
Score = 45.1 bits (92), Expect(3) = 7e-029
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = -2 / -3
Query: 494 MPFGMGRRKCPGEALALRTLGLVLGTLIQCFDWD 393
+PFG GRR CPG L + + L+L L+ FDW+
Sbjct: 304 LPFGAGRRMCPGMNLGIANVELMLANLVCHFDWE 203
Score = 23.1 bits (44), Expect(3) = 7e-029
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -2 / -3
Query: 389 VGGAEVDMAEGGGITLPRAVPLEAICKPR 303
VG ++DM E G+T+ R L + K R
Sbjct: 190 VGRKDIDMTEVFGLTVRRKEKLLLVPKSR 104
>gb|AU252315.1|AU252315 AU252315 salt-stressed barley root cDNA Hordeum vulgare subsp.
vulgare cDNA clone BR-C08 similar to cytochrome P450
CYP99A1, mRNA sequence
Length = 540
Score = 91.3 bits (193), Expect(2) = 8e-029
Identities = 37/78 (47%), Positives = 47/78 (60%)
Frame = -2 / +1
Query: 743 DDLPRLGYLHCIVSETLRLYPVVPTLVPHESTADCTVGGHRVPSGTMLLVNVYAIHRDPA 564
D + L Y+ ++ ET+RL PVVP LVPH C VGG + GT +LVN +A+ R P
Sbjct: 1 DRIDDLHYIKMMIKETMRLNPVVPLLVPHLCRETCDVGGFEIKEGTRVLVNAWAMARSPE 180
Query: 563 IWADPAAFRPERFEDGRA 510
W + F PERFEDG A
Sbjct: 181 YWENAEEFMPERFEDGTA 234
Score = 56.1 bits (116), Expect(2) = 8e-029
Identities = 20/42 (47%), Positives = 25/42 (59%)
Frame = -2 / +1
Query: 494 MPFGMGRRKCPGEALALRTLGLVLGTLIQCFDWDTVGGAEVD 369
+PFG GRRKCPG+ L TL L++ L+ FDW G D
Sbjct: 262 LPFGTGRRKCPGDTFGLATLDLIVARLLYYFDWSLPAGTRPD 387
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 435,471,827
Number of Sequences: 312970
Number of extensions: 6672073
Number of successful extensions: 94914
Number of sequences better than 1.0e-020: 161
length of database: 58,378,179
effective HSP length: 52
effective length of database: 42,103,739
effective search space used: 11031179618
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)