TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3042304.2.1
(805 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AV921006.1|AV921006 AV921006 K. Sato unpublished cDNA li... 323 8e-093
gb|BF627578.2|BF627578 HVSMEb0005D17f Hordeum vulgare seedl... 325 2e-090
gb|AV919157.1|AV919157 AV919157 K. Sato unpublished cDNA li... 309 1e-088
gb|BF258204.2|BF258204 HVSMEf0015B12f Hordeum vulgare seedl... 300 4e-083
gb|BF253522.3|BF253522 HVSMEf0001C17f Hordeum vulgare seedl... 275 2e-078
gb|BF620279.2|BF620279 HVSMEc0019E20f Hordeum vulgare seedl... 286 1e-076
gb|BJ548879.1|BJ548879 BJ548879 K. Sato unpublished cDNA li... 255 1e-076
gb|BJ449493.1|BJ449493 BJ449493 K. Sato unpublished cDNA li... 276 1e-073
gb|BU970828.1|BU970828 HB15M21r BC Hordeum vulgare subsp. v... 267 2e-073
gb|BJ546337.1|BJ546337 BJ546337 K. Sato unpublished cDNA li... 267 3e-073
gb|CA002810.1|CA002810 HS08J14r HS Hordeum vulgare subsp. v... 273 1e-072
gb|BI958920.1|BI958920 HVSMEn0017D23f Hordeum vulgare rachi... 258 1e-072
gb|BU982278.1|BU982278 HA26A18r HA Hordeum vulgare subsp. v... 269 2e-071
gb|BU972745.1|BU972745 HB22J12r BC Hordeum vulgare subsp. v... 265 2e-070
gb|BJ544684.1|BJ544684 BJ544684 K. Sato unpublished cDNA li... 265 2e-070
gb|BF256948.2|BF256948 HVSMEf0011H06f Hordeum vulgare seedl... 260 2e-070
gb|BM816655.1|BM816655 HB01A07_T3.ab1 HB Hordeum vulgare su... 249 2e-070
gb|CV062330.1|CV062330 BNEL78h1 Barley EST endosperm librar... 247 4e-070
gb|BU996667.1|BU996667 HM14F14r HM Hordeum vulgare subsp. v... 263 8e-070
gb|BG301258.2|BG301258 HVSMEb0020E14f Hordeum vulgare seedl... 198 3e-069
gb|BJ546155.1|BJ546155 BJ546155 K. Sato unpublished cDNA li... 244 4e-069
gb|AL510717.1|AL510717 AL510717 Hordeum vulgare Barke devel... 221 1e-068
gb|AV911559.1|AV911559 AV911559 K. Sato unpublished cDNA li... 242 2e-068
gb|BQ757608.1|BQ757608 EBem10_SQ004_K13_R embryo, 2 Day ger... 249 4e-068
gb|CV063225.1|CV063225 BNEL88a10 Barley EST endosperm libra... 247 2e-067
gb|BF260520.3|BF260520 HVSMEf0022D16f Hordeum vulgare seedl... 242 1e-066
gb|BM443008.2|BM443008 EBro02_SQ002_C21_R root, 3 week, hyd... 248 3e-065
gb|AV909217.1|AV909217 AV909217 K. Sato unpublished cDNA li... 242 2e-063
gb|AV911101.1|AV911101 AV911101 K. Sato unpublished cDNA li... 237 8e-062
gb|BJ477449.1|BJ477449 BJ477449 K. Sato unpublished cDNA li... 237 8e-062
gb|BI960078.1|BI960078 HVSMEn0023C04f Hordeum vulgare rachi... 197 5e-058
gb|BF256552.2|BF256552 HVSMEf0010F04f Hordeum vulgare seedl... 217 7e-056
gb|AV919156.1|AV919156 AV919156 K. Sato unpublished cDNA li... 217 7e-056
gb|AV921718.1|AV921718 AV921718 K. Sato unpublished cDNA li... 217 7e-056
gb|BJ462617.1|BJ462617 BJ462617 K. Sato unpublished cDNA li... 217 7e-056
gb|BJ463352.1|BJ463352 BJ463352 K. Sato unpublished cDNA li... 217 7e-056
gb|BJ463970.1|BJ463970 BJ463970 K. Sato unpublished cDNA li... 217 7e-056
gb|BQ658243.1|BQ658243 HB09P05w BC Hordeum vulgare subsp. v... 217 7e-056
gb|BQ767952.1|BQ767952 EBro08_SQ010_E07_R root, 3 week, dro... 217 7e-056
gb|AJ463159.1|AJ463159 AJ463159 S00002 Hordeum vulgare subs... 208 1e-055
gb|AV914847.1|AV914847 AV914847 K. Sato unpublished cDNA li... 215 2e-055
gb|BF258305.2|BF258305 HVSMEf0015F24f Hordeum vulgare seedl... 215 2e-055
gb|BE231175.2|BE231175 HVSMEg0017G06f Hordeum vulgare pre-a... 209 2e-053
gb|AJ463158.1|AJ463158 AJ463158 S00002 Hordeum vulgare subs... 200 2e-053
gb|BF254210.3|BF254210 HVSMEf0003F07f Hordeum vulgare seedl... 208 3e-053
gb|BE455469.2|BE455469 HVSMEg0017F01f Hordeum vulgare pre-a... 207 7e-053
gb|BJ454281.1|BJ454281 BJ454281 K. Sato unpublished cDNA li... 207 7e-053
gb|BJ466302.1|BJ466302 BJ466302 K. Sato unpublished cDNA li... 206 1e-052
gb|AV936421.1|AV936421 AV936421 K. Sato unpublished cDNA li... 193 4e-052
gb|AV909659.1|AV909659 AV909659 K. Sato unpublished cDNA li... 122 1e-051
gb|BE215685.3|BE215685 HV_CEb0007P22f Hordeum vulgare seedl... 183 2e-051
gb|BF260651.2|BF260651 HVSMEf0022J07f Hordeum vulgare seedl... 201 5e-051
gb|BG418221.1|BG418221 HVSMEk0021P03f Hordeum vulgare testa... 200 9e-051
gb|AV920933.1|AV920933 AV920933 K. Sato unpublished cDNA li... 196 2e-049
gb|BJ549915.1|BJ549915 BJ549915 K. Sato unpublished cDNA li... 185 7e-049
gb|BG416704.2|BG416704 HVSMEk0014D01f Hordeum vulgare testa... 181 3e-048
gb|BE519855.1|BE519855 HV_CEb0021H15f Hordeum vulgare seedl... 192 3e-048
gb|AV917603.1|AV917603 AV917603 K. Sato unpublished cDNA li... 189 2e-047
gb|AV918871.1|AV918871 AV918871 K. Sato unpublished cDNA li... 189 2e-047
gb|AV919513.1|AV919513 AV919513 K. Sato unpublished cDNA li... 189 2e-047
gb|AV921216.1|AV921216 AV921216 K. Sato unpublished cDNA li... 189 2e-047
gb|BJ467706.1|BJ467706 BJ467706 K. Sato unpublished cDNA li... 189 2e-047
gb|BJ467865.1|BJ467865 BJ467865 K. Sato unpublished cDNA li... 189 2e-047
gb|AV919679.1|AV919679 AV919679 K. Sato unpublished cDNA li... 188 3e-047
gb|BJ466237.1|BJ466237 BJ466237 K. Sato unpublished cDNA li... 188 3e-047
gb|BQ658402.1|BQ658402 HB09E05w BC Hordeum vulgare subsp. v... 188 3e-047
gb|BQ763954.1|BQ763954 EBro03_SQ005_J20_R root, 3 week, wat... 188 3e-047
gb|CA017402.1|CA017402 HV05B15r HV Hordeum vulgare subsp. v... 188 3e-047
gb|BF259502.2|BF259502 HVSMEf0019I02f Hordeum vulgare seedl... 163 5e-047
gb|BJ456934.1|BJ456934 BJ456934 K. Sato unpublished cDNA li... 182 2e-045
gb|AV919076.1|AV919076 AV919076 K. Sato unpublished cDNA li... 107 3e-045
gb|BM370165.2|BM370165 EBro08_SQ003_D02_R root, 3 week, dro... 178 3e-044
gb|AV918649.1|AV918649 AV918649 K. Sato unpublished cDNA li... 178 4e-044
gb|AV921346.1|AV921346 AV921346 K. Sato unpublished cDNA li... 178 4e-044
gb|AV920629.1|AV920629 AV920629 K. Sato unpublished cDNA li... 107 4e-044
gb|AL502423.1|AL502423 AL502423 Hordeum vulgare Barke roots... 151 1e-043
gb|AV913541.1|AV913541 AV913541 K. Sato unpublished cDNA li... 172 2e-042
gb|BJ457809.1|BJ457809 BJ457809 K. Sato unpublished cDNA li... 172 2e-042
gb|BQ660562.1|BQ660562 HI04D15u HI Hordeum vulgare subsp. v... 172 2e-042
gb|BM372796.2|BM372796 EBpi05_SQ003_P06_R pistil, 8 DPA, no... 172 2e-042
gb|BQ763511.1|BQ763511 EBro02_SQ008_I15_R root, 3 week, hyd... 172 2e-042
gb|BQ471753.1|BQ471753 HV03F22r HV Hordeum vulgare subsp. v... 170 8e-042
gb|BQ763370.1|BQ763370 EBro02_SQ008_K01_R root, 3 week, hyd... 111 6e-041
gb|AJ436651.1|AJ436651 AJ436651 S00002 Hordeum vulgare subs... 146 3e-040
gb|AV921342.1|AV921342 AV921342 K. Sato unpublished cDNA li... 163 9e-040
gb|BJ461814.1|BJ461814 BJ461814 K. Sato unpublished cDNA li... 163 9e-040
gb|AV918957.1|AV918957 AV918957 K. Sato unpublished cDNA li... 89 1e-039
gb|BM370094.2|BM370094 EBro08_SQ002_P14_R root, 3 week, dro... 160 9e-039
gb|BQ762329.1|BQ762329 EBro01_SQ005_C16_R root, 3 week, hyd... 160 1e-038
gb|BI959211.1|BI959211 HVSMEn0018K15f Hordeum vulgare rachi... 159 2e-038
gb|AV922111.1|AV922111 AV922111 K. Sato unpublished cDNA li... 159 2e-038
gb|AV930865.1|AV930865 AV930865 K. Sato unpublished cDNA li... 159 2e-038
gb|BQ664682.1|BQ664682 HV04G11u HV Hordeum vulgare subsp. v... 159 2e-038
gb|BU987625.1|BU987625 HF15E16r HF Hordeum vulgare subsp. v... 159 2e-038
gb|BI947157.1|BI947157 HVSMEl0003P09f Hordeum vulgare spike... 133 3e-038
gb|AV914112.1|AV914112 AV914112 K. Sato unpublished cDNA li... 158 4e-038
gb|AV913689.1|AV913689 AV913689 K. Sato unpublished cDNA li... 157 8e-038
gb|AV913736.1|AV913736 AV913736 K. Sato unpublished cDNA li... 156 1e-037
gb|BJ465749.1|BJ465749 BJ465749 K. Sato unpublished cDNA li... 107 4e-037
gb|CB877081.1|CB877081 HP03I02T HP Hordeum vulgare subsp. v... 154 5e-037
gb|BU969174.1|BU969174 HB10M08r BC Hordeum vulgare subsp. v... 119 8e-037
gb|AV918391.1|AV918391 AV918391 K. Sato unpublished cDNA li... 80 5e-036
gb|AL510116.1|AL510116 AL510116 Hordeum vulgare Barke devel... 149 2e-035
gb|BJ468273.1|BJ468273 BJ468273 K. Sato unpublished cDNA li... 149 2e-035
gb|BQ757060.1|BQ757060 EBem10_SQ002_K18_R embryo, 2 Day ger... 139 3e-035
gb|BJ464957.1|BJ464957 BJ464957 K. Sato unpublished cDNA li... 146 2e-034
gb|AV918994.1|AV918994 AV918994 K. Sato unpublished cDNA li... 80 3e-034
gb|AV915891.1|AV915891 AV915891 K. Sato unpublished cDNA li... 145 3e-034
gb|CB858420.1|CB858420 HI06P03w HI Hordeum vulgare subsp. v... 144 8e-034
gb|CB874388.1|CB874388 HX05B24w HX Hordeum vulgare subsp. v... 144 8e-034
gb|AL509971.1|AL509971 AL509971 Hordeum vulgare Barke devel... 127 1e-033
gb|BQ759253.1|BQ759253 EBpi01_SQ003_D23_R pistil, 1 DPA, no... 143 2e-033
gb|BJ465124.1|BJ465124 BJ465124 K. Sato unpublished cDNA li... 142 2e-033
gb|BM442828.2|BM442828 EBro02_SQ001_H02_R root, 3 week, hyd... 142 2e-033
gb|CB879741.1|CB879741 HP03I02w HP Hordeum vulgare subsp. v... 142 2e-033
gb|BM816179.1|BM816179 HC02E01_T3.ab1 HC Hordeum vulgare su... 139 2e-032
gb|BU988947.1|BU988947 HF19D20r HF Hordeum vulgare subsp. v... 139 2e-032
gb|BE060857.3|BE060857 HVSMEg0013J21f Hordeum vulgare pre-a... 113 2e-032
gb|AV912428.1|AV912428 AV912428 K. Sato unpublished cDNA li... 138 5e-032
gb|BM443026.2|BM443026 EBro02_SQ002_D20_R root, 3 week, hyd... 138 5e-032
gb|BU972342.1|BU972342 HB21G01r BC Hordeum vulgare subsp. v... 136 1e-031
gb|AV910273.1|AV910273 AV910273 K. Sato unpublished cDNA li... 136 2e-031
gb|AV914047.1|AV914047 AV914047 K. Sato unpublished cDNA li... 135 3e-031
gb|BU994833.1|BU994833 HM08F16r HM Hordeum vulgare subsp. v... 133 9e-031
gb|BG417116.1|BG417116 HVSMEk0016F09f Hordeum vulgare testa... 133 1e-030
gb|BJ547904.1|BJ547904 BJ547904 K. Sato unpublished cDNA li... 128 4e-029
gb|CB877082.1|CB877082 HP03I03T HP Hordeum vulgare subsp. v... 126 1e-028
gb|BM373174.2|BM373174 EBma04_SQ003_G07_R maternal, 10 DPA,... 125 3e-028
gb|CB880960.1|CB880960 HM08F16w HM Hordeum vulgare subsp. v... 125 4e-028
gb|BI958082.1|BI958082 HVSMEn0013D12f Hordeum vulgare rachi... 124 7e-028
gb|BM443269.2|BM443269 EBro02_SQ003_F16_R root, 3 week, hyd... 123 1e-027
gb|BJ544855.1|BJ544855 BJ544855 K. Sato unpublished cDNA li... 122 2e-027
gb|AL502503.1|AL502503 AL502503 Hordeum vulgare Barke roots... 120 9e-027
gb|BJ467263.1|BJ467263 BJ467263 K. Sato unpublished cDNA li... 120 1e-026
gb|BJ466118.1|BJ466118 BJ466118 K. Sato unpublished cDNA li... 118 3e-026
gb|BI951009.1|BI951009 HVSMEl0024A04f Hordeum vulgare spike... 117 6e-026
gb|BU979918.1|BU979918 HA17M18r HA Hordeum vulgare subsp. v... 116 2e-025
gb|AV930869.1|AV930869 AV930869 K. Sato unpublished cDNA li... 116 2e-025
gb|CA016125.1|CA016125 HV10D08u HV Hordeum vulgare subsp. v... 116 2e-025
gb|CA016785.1|CA016785 HV06E14u HV Hordeum vulgare subsp. v... 116 2e-025
gb|AL511382.1|AL511382 AL511382 Hordeum vulgare Barke devel... 113 1e-024
gb|BQ664074.1|BQ664074 HV01J15w HV Hordeum vulgare subsp. v... 113 1e-024
gb|CA028466.1|CA028466 HZ62B03r HZ Hordeum vulgare subsp. v... 110 1e-023
gb|BQ756196.1|BQ756196 EBem05_SQ004_C06_R embryo, 14 DPA, n... 100 8e-022
gb|BJ464470.1|BJ464470 BJ464470 K. Sato unpublished cDNA li... 104 8e-022
gb|AV915529.1|AV915529 AV915529 K. Sato unpublished cDNA li... 101 5e-021
gb|BG418023.1|BG418023 HVSMEk0020M24f Hordeum vulgare testa... 100 7e-021
>gb|AV921006.1|AV921006 AV921006 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags16h19 3', mRNA sequence
Length = 705
Score = 323 bits (700), Expect(3) = 8e-093
Identities = 134/157 (85%), Positives = 141/157 (89%)
Frame = +3 / -2
Query: 45 VXIARIFNTYGPRMCIDDGRVVS*XVAQALXXEPLTVYGDGKQTRSFQYVSDLVEGLMKL 224
V IARIFNTYGPRMCIDDGRVVS VAQAL PLTVYGDGKQTRSFQYVSDLVEGLM+L
Sbjct: 677 VRIARIFNTYGPRMCIDDGRVVSNFVAQALRKXPLTVYGDGKQTRSFQYVSDLVEGLMRL 498
Query: 225 MEGEHVGPFNLGNPGEFTMLELAXVVQDTIDPNARIEFRQNTXDDPHKRKPDIGRAKELL 404
MEG+H+GPFNLGNPGEFTMLELA VVQDTIDPNARIEFR+NT DDPHKRKPDI +AKE L
Sbjct: 497 MEGDHIGPFNLGNPGEFTMLELAKVVQDTIDPNARIEFRENTQDDPHKRKPDITKAKEQL 318
Query: 405 GWEPKIPLREGLPLMVTDFRKRIFGDQDTAAATPGNQ 515
GWEPKI LR+GLPLMVTDFRKRIFGDQD+AA Q
Sbjct: 317 GWEPKIALRDGLPLMVTDFRKRIFGDQDSAATATEGQ 207
Score = 287 bits (622), Expect(3) = 4e-079
Identities = 126/157 (80%), Positives = 131/157 (83%)
Frame = -1 / +1
Query: 514 WFPGVAAAVSWSPKMRLRKSVTMRGRPSRRGIFGSHPRSSLARPMSGLRLCGSSWVF*RN 335
W AA+SWSP +RLRKSVTMRGRPSRR I GSHP SLA +SGLRLCGSSWVF RN
Sbjct: 208 WPSVAVAALSWSPNIRLRKSVTMRGRPSRRAILGSHPSCSLALVISGLRLCGSSWVFSRN 387
Query: 334 SIRALGSMVSWTTLASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP* 155
SIRA GSMVSWTTLASSSMVNSPGLP+LNGP SPSIS I PST+SETYWKLLVC PSP*
Sbjct: 388 SIRAFGSMVSWTTLASSSMVNSPGLPKLNGPM*SPSISLINPSTKSETYWKLLVCLPSP* 567
Query: 154 TVNGSFXSA*ATX*LTTRPSSMHMRGPYVLKIRAIXT 44
TV G F SA*AT LTTRPSSMHMRGP VLKIRAI T
Sbjct: 568 TVKGXFLSA*ATKLLTTRPSSMHMRGP*VLKIRAILT 678
Score = 195 bits (421), Expect = 2e-049
Identities = 82/124 (66%), Positives = 91/124 (73%)
Frame = +2 / -1
Query: 50 DRTYLQHIWPSHVH*RWPCCQLXRCSGTXEXAIDGLW*WKANQEFPICF*SGRGSDEADG 229
D + L H+WP+HVH*RWPCCQ CSG E A DGL W+A+QEFPI F* G G DEADG
Sbjct: 672 DCSDL*HLWPTHVH*RWPCCQQLCCSGAKEXAFDGLRRWQADQEFPIRF*FG*GVDEADG 493
Query: 230 RRACRTI*PGQPRRVHHAGACQXCPGHHRPQRTDRVPSEHPXRPTQAQARHRPCQGAPWV 409
R + I GQPR VHHAG Q CPGHHRP+R DRVP EHP RP QAQAR+ QGA WV
Sbjct: 492 R*SHWAIQLGQPR*VHHAGTGQGCPGHHRPERADRVP*EHPGRPAQAQARYHQGQGATWV 313
Query: 410 GAKD 421
GA+D
Sbjct: 312 GAQD 301
Score = 192 bits (413), Expect = 3e-048
Identities = 88/144 (61%), Positives = 102/144 (70%)
Frame = -3 / +3
Query: 476 EDALAEVGDHEGKALAEGDLWLPPKELLGTADXXXXXXXXXXXXLTELDPCVGVDGVLDN 297
E LAEVG+HEG+A+ EGDL LPPK LLG D LTELDP V VDGVLDN
Sbjct: 246 EYPLAEVGNHEGEAVTEGDLGLPPKLLLGLGDIWLALVRVVLGVLTELDPRVRVDGVLDN 425
Query: 296 XGKLQHGELAGVAQVKWSYMLAFHQLHQTLDQIRNILETPGLLSITINRQWLXXQCLSNX 117
G+ QHGEL GVAQV+W ++ FHQ HQ L+QIRN+LETPGLL+I +NRQ L LSN
Sbjct: 426 LGQFQHGELTGVAQVEWPNVITFHQPHQPLNQIRNVLETPGLLAIAVNRQRLLP*RLSNK 605
Query: 116 LTDNTAIVNAHARAICVEDTCDXN 45
+ DNTAIVNAHA AI V+D + N
Sbjct: 606 VADNTAIVNAHAWAIGVKDPSNPN 677
Score = 163 bits (351), Expect = 9e-040
Identities = 68/100 (68%), Positives = 72/100 (72%)
Frame = -2 / +2
Query: 345 SDGTRSVRWGRWCPGQXWQAPAW*TRRGCPG*MVLHARLPSASSDPRPDQKHIGNSWFAF 166
S GTRS R GRWCPGQ W PAW*T RGCP *M LPSASS P+P+QK IGNSW A
Sbjct: 377 SHGTRSARSGRWCPGQPWPVPAW*THRGCPS*MAQCDHLPSASSTPQPNQKRIGNSWSAC 556
Query: 165 HHHKPSMAXSSVPEQRXN*QHGHRQCTCEGHMC*RYVRS* 46
H KPS A S PEQ+ *QHGHRQCTC GH C*R +S*
Sbjct: 557 HRRKPSKAXSLAPEQQSC*QHGHRQCTCVGHRC*RSEQS* 676
Score = 159 bits (342), Expect = 2e-038
Identities = 78/126 (61%), Positives = 81/126 (64%)
Frame = +1 / -3
Query: 61 SSTHMALACALTMAVLSVXSLLRH*XXSH*RFMVMESKPGVSNMFLIWSRV**S*WKASM 240
S T MA ACALTMAVLS LLR * S *RF M S+PGVSN FLIW R ** *WK
Sbjct: 661 SLTPMAHACALTMAVLSATLLLRR*GXSL*RFTAMASRPGVSNTFLIWLRG**G*WKVIT 482
Query: 241 *DHLTWATPASSPCWSLPXLSRTPSTPTHGSSSVRXXXXXXXXXXXXXXVPRSSLGGSQR 420
H TWATP SSPCW+ P LSRTPST T GSSSVR PRS+LGGS R
Sbjct: 481 LGHSTWATPVSSPCWNWPRLSRTPSTRTRGSSSVRTPRTTRTSASQISPRPRSNLGGSPR 302
Query: 421 SPSARA 438
SPS A
Sbjct: 301 SPSVTA 284
Score = 28.6 bits (56), Expect(3) = 8e-093
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +2 / -1
Query: 554 FWWPASSCLVG 586
FWWPASS L+G
Sbjct: 174 FWWPASSFLLG 142
Score = 28.1 bits (55), Expect(3) = 8e-093
Identities = 8/12 (66%), Positives = 12/12 (100%)
Frame = +2 / -2
Query: 644 EIPWLML*CYSF 679
++PWL++*CYSF
Sbjct: 83 KLPWLLV*CYSF 48
Score = 24.4 bits (47), Expect(3) = 4e-079
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = -2 / +2
Query: 585 PTKQLEAGHQKF 550
P ++LEAGHQ F
Sbjct: 143 PRRKLEAGHQNF 178
Score = 22.1 bits (42), Expect(3) = 4e-079
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = -2 / +1
Query: 681 EKE*HYSINQG 649
+KE*HY+ NQG
Sbjct: 46 KKE*HYTNNQG 78
>gb|BF627578.2|BF627578 HVSMEb0005D17f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0005D17f, mRNA sequence
Length = 771
Score = 325 bits (703), Expect(2) = 2e-090
Identities = 134/150 (89%), Positives = 140/150 (93%)
Frame = +3 / +3
Query: 45 VXIARIFNTYGPRMCIDDGRVVS*XVAQALXXEPLTVYGDGKQTRSFQYVSDLVEGLMKL 224
V IARIFNTYGPRMCIDDGRVVS VAQAL EPLTVYGDGKQTRSFQYVSDLVEGLM+L
Sbjct: 189 VRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMRL 368
Query: 225 MEGEHVGPFNLGNPGEFTMLELAXVVQDTIDPNARIEFRQNTXDDPHKRKPDIGRAKELL 404
MEG+H+GPFNLGNPGEFTMLELA VVQDTIDPNARIEFR+NT DDPHKRKPDI RAKE L
Sbjct: 369 MEGDHIGPFNLGNPGEFTMLELAKVVQDTIDPNARIEFRENTQDDPHKRKPDITRAKEQL 548
Query: 405 GWEPKIPLREGLPLMVTDFRKRIFGDQDTA 494
GWEPKI LR+GLPLMVTDFRKRIFGDQD+A
Sbjct: 549 GWEPKIALRDGLPLMVTDFRKRIFGDQDSA 638
Score = 284 bits (615), Expect(2) = 3e-078
Identities = 124/150 (82%), Positives = 130/150 (86%)
Frame = -1 / -3
Query: 493 AVSWSPKMRLRKSVTMRGRPSRRGIFGSHPRSSLARPMSGLRLCGSSWVF*RNSIRALGS 314
A+SWSP +RLRKSVT+RGRPSRR I GSHP SLA +SGLRLCGSSWVF RNSIRA GS
Sbjct: 637 ALSWSPNIRLRKSVTIRGRPSRRAILGSHPSCSLALVISGLRLCGSSWVFSRNSIRAFGS 458
Query: 313 MVSWTTLASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVNGSFX 134
MVSWTTLASSSMVNSPGLP+LNGP SPSIS I PST+SETYWKLLVC PSP*TV GSF
Sbjct: 457 MVSWTTLASSSMVNSPGLPKLNGPM*SPSISLINPSTKSETYWKLLVCLPSP*TVKGSFL 278
Query: 133 SA*ATX*LTTRPSSMHMRGPYVLKIRAIXT 44
SA*AT LTTRPSSMHMRGP VLKIRAI T
Sbjct: 277 SA*ATKLLTTRPSSMHMRGP*VLKIRAILT 188
Score = 196 bits (423), Expect = 1e-049
Identities = 81/124 (65%), Positives = 90/124 (72%)
Frame = +2 / +2
Query: 50 DRTYLQHIWPSHVH*RWPCCQLXRCSGTXEXAIDGLW*WKANQEFPICF*SGRGSDEADG 229
D + L H+WP+HVH*RWPCCQ CSG E A DGL W+A+QEFPI F* G G DEADG
Sbjct: 194 DCSDL*HLWPTHVH*RWPCCQQLCCSGAKEGAFDGLRRWQADQEFPIRF*FG*GVDEADG 373
Query: 230 RRACRTI*PGQPRRVHHAGACQXCPGHHRPQRTDRVPSEHPXRPTQAQARHRPCQGAPWV 409
R + I GQPR VHHAG Q CPGHHRP+R DRVP EHP RP QAQAR+ QGA WV
Sbjct: 374 R*SHWAIQLGQPR*VHHAGTGQGCPGHHRPERADRVP*EHPGRPAQAQARYHQSQGATWV 553
Query: 410 GAKD 421
GA+D
Sbjct: 554 GAQD 565
Score = 191 bits (412), Expect = 4e-048
Identities = 87/147 (59%), Positives = 105/147 (71%)
Frame = -3 / -2
Query: 476 EDALAEVGDHEGKALAEGDLWLPPKELLGTADXXXXXXXXXXXXLTELDPCVGVDGVLDN 297
E LAEVG+H+G+A+ EGDL LPPK LLG+ D LTELDP V VDGVLDN
Sbjct: 620 EYPLAEVGNHKGEAVTEGDLGLPPKLLLGSGDIWLALVRVVLGVLTELDPRVRVDGVLDN 441
Query: 296 XGKLQHGELAGVAQVKWSYMLAFHQLHQTLDQIRNILETPGLLSITINRQWLXXQCLSNX 117
G+ QHGEL GVAQV+W ++ FHQ HQ L+QIRN+LETPGLL+I +NRQ L LSN
Sbjct: 440 LGQFQHGELTGVAQVEWPNVITFHQPHQPLNQIRNVLETPGLLAIAVNRQRLLP*RLSNK 261
Query: 116 LTDNTAIVNAHARAICVEDTCDXNSRL 36
+ DNTAIVNAHA AI V+D + N ++
Sbjct: 260 VADNTAIVNAHAWAIGVKDPSNPNLKV 180
Score = 163 bits (350), Expect = 1e-039
Identities = 67/100 (67%), Positives = 71/100 (71%)
Frame = -2 / -1
Query: 345 SDGTRSVRWGRWCPGQXWQAPAW*TRRGCPG*MVLHARLPSASSDPRPDQKHIGNSWFAF 166
S GTRS R GRWCPGQ W PAW*T RGCP *M LPSASS P+P+QK IGNSW A
Sbjct: 489 SHGTRSARSGRWCPGQPWPVPAW*THRGCPS*MAQCDHLPSASSTPQPNQKRIGNSWSAC 310
Query: 165 HHHKPSMAXSSVPEQRXN*QHGHRQCTCEGHMC*RYVRS* 46
H KPS A S PEQ+ *QHGHRQCTC GH C*R +S*
Sbjct: 309 HRRKPSKAPSLAPEQQSC*QHGHRQCTCVGHRC*RSEQS* 190
Score = 160 bits (343), Expect = 1e-038
Identities = 77/126 (61%), Positives = 80/126 (63%)
Frame = +1 / +1
Query: 61 SSTHMALACALTMAVLSVXSLLRH*XXSH*RFMVMESKPGVSNMFLIWSRV**S*WKASM 240
S T MA ACALTMAVLS LLR * S *RF M S+PGVSN FLIW R ** *WK
Sbjct: 205 SLTPMAHACALTMAVLSATLLLRR*GRSL*RFTAMASRPGVSNTFLIWLRG**G*WKVIT 384
Query: 241 *DHLTWATPASSPCWSLPXLSRTPSTPTHGSSSVRXXXXXXXXXXXXXXVPRSSLGGSQR 420
H TWATP SSPCW+ P LSRTPST T GSSSVR PRS+LGGS R
Sbjct: 385 LGHSTWATPVSSPCWNWPRLSRTPSTRTRGSSSVRTPRTTRTSASQISPEPRSNLGGSPR 564
Query: 421 SPSARA 438
SPS A
Sbjct: 565 SPSVTA 582
Score = 28.1 bits (55), Expect(2) = 2e-090
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +2 / +2
Query: 551 NFWWPASSCLVGPP 592
N WWPA S L+G P
Sbjct: 689 NIWWPAFSFLLGNP 730
Score = 27.6 bits (54), Expect(2) = 3e-078
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = -3 / -1
Query: 32 HGGNPWSRF 6
HGG+PWSRF
Sbjct: 174 HGGSPWSRF 148
>gb|AV919157.1|AV919157 AV919157 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags4m11 3', mRNA sequence
Length = 678
Score = 309 bits (669), Expect(3) = 1e-088
Identities = 127/148 (85%), Positives = 134/148 (90%)
Frame = +3 / -3
Query: 72 YGPRMCIDDGRVVS*XVAQALXXEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHVGPF 251
YGPRMCIDDGRVVS VAQAL EPLTVYGDGKQTRSFQYVSDLVEGLM+LMEG+H+GPF
Sbjct: 649 YGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMRLMEGDHIGPF 470
Query: 252 NLGNPGEFTMLELAXVVQDTIDPNARIEFRQNTXDDPHKRKPDIGRAKELLGWEPKIPLR 431
NLGNPGEFTMLELA VVQDTIDPNARIEFR+NT DDPHKRKPDI +AKE LGWEPKI LR
Sbjct: 469 NLGNPGEFTMLELAKVVQDTIDPNARIEFRENTQDDPHKRKPDITKAKEQLGWEPKIALR 290
Query: 432 EGLPLMVTDFRKRIFGDQDTAAATPGNQ 515
+GLPLMVTDFRKRIFGDQD+AA Q
Sbjct: 289 DGLPLMVTDFRKRIFGDQDSAATATEGQ 206
Score = 275 bits (596), Expect(3) = 1e-075
Identities = 119/147 (80%), Positives = 124/147 (84%)
Frame = -1 / +3
Query: 514 WFPGVAAAVSWSPKMRLRKSVTMRGRPSRRGIFGSHPRSSLARPMSGLRLCGSSWVF*RN 335
W AA+SWSP +RLRKSVTMRGRPSRR I GSHP SLA +SGLRLCGSSWVF RN
Sbjct: 207 WPSVAVAALSWSPNIRLRKSVTMRGRPSRRAILGSHPSCSLALVISGLRLCGSSWVFSRN 386
Query: 334 SIRALGSMVSWTTLASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP* 155
SIRA GSMVSWTTLASSSMVNSPGLP+LNGP SPSIS I PST+SETYWKLLVC PSP*
Sbjct: 387 SIRAFGSMVSWTTLASSSMVNSPGLPKLNGPM*SPSISLINPSTKSETYWKLLVCLPSP* 566
Query: 154 TVNGSFXSA*ATX*LTTRPSSMHMRGP 74
TV GSF SA*AT LTTRPSSMHMRGP
Sbjct: 567 TVKGSFLSA*ATKLLTTRPSSMHMRGP 647
Score = 191 bits (412), Expect(3) = 1e-048
Identities = 78/117 (66%), Positives = 86/117 (73%)
Frame = +2 / -2
Query: 71 IWPSHVH*RWPCCQLXRCSGTXEXAIDGLW*WKANQEFPICF*SGRGSDEADGRRACRTI 250
+WP+HVH*RWPCCQ CSG E A DGL W+A+QEFPI F* G G DEADGR + I
Sbjct: 650 LWPTHVH*RWPCCQQLCCSGAKEGAFDGLRRWQADQEFPIRF*FG*GVDEADGR*SHWAI 471
Query: 251 *PGQPRRVHHAGACQXCPGHHRPQRTDRVPSEHPXRPTQAQARHRPCQGAPWVGAKD 421
GQPR VHHAG Q CPGHHRP+R DRVP EHP RP QAQAR+ QGA WVGA+D
Sbjct: 470 QLGQPR*VHHAGTGQGCPGHHRPERADRVP*EHPGRPAQAQARYHQGQGATWVGAQD 300
Score = 187 bits (402), Expect = 9e-047
Identities = 85/135 (62%), Positives = 97/135 (71%)
Frame = -3 / +2
Query: 476 EDALAEVGDHEGKALAEGDLWLPPKELLGTADXXXXXXXXXXXXLTELDPCVGVDGVLDN 297
E LAEVG+HEG+A+ EGDL LPPK LLG D LTELDP V VDGVLDN
Sbjct: 245 EYPLAEVGNHEGEAVTEGDLGLPPKLLLGLGDIWLALVRVVLGVLTELDPRVRVDGVLDN 424
Query: 296 XGKLQHGELAGVAQVKWSYMLAFHQLHQTLDQIRNILETPGLLSITINRQWLXXQCLSNX 117
G+ QHGEL GVAQV+W ++ FHQ HQ L+QIRN+LETPGLL+I +NRQ L LSN
Sbjct: 425 LGQFQHGELTGVAQVEWPNVITFHQPHQPLNQIRNVLETPGLLAIAVNRQRLLP*RLSNK 604
Query: 116 LTDNTAIVNAHARAI 72
+ DNTAIVNAHA AI
Sbjct: 605 VADNTAIVNAHAWAI 649
Score = 157 bits (337), Expect = 8e-038
Identities = 75/122 (61%), Positives = 78/122 (63%)
Frame = +1 / -1
Query: 73 MALACALTMAVLSVXSLLRH*XXSH*RFMVMESKPGVSNMFLIWSRV**S*WKASM*DHL 252
MA ACALTMAVLS LLR * S *RF M S+PGVSN FLIW R ** *WK H
Sbjct: 648 MAHACALTMAVLSATLLLRR*GRSL*RFTAMASRPGVSNTFLIWLRG**G*WKVITLGHS 469
Query: 253 TWATPASSPCWSLPXLSRTPSTPTHGSSSVRXXXXXXXXXXXXXXVPRSSLGGSQRSPSA 432
TWATP SSPCW+ P LSRTPST T GSSSVR PRS+LGGS RSPS
Sbjct: 468 TWATPVSSPCWNWPRLSRTPSTRTRGSSSVRTPRTTRTSASQISPRPRSNLGGSPRSPSV 289
Query: 433 RA 438
A
Sbjct: 288 TA 283
Score = 155 bits (334), Expect = 2e-037
Identities = 62/91 (68%), Positives = 65/91 (71%)
Frame = -2 / +1
Query: 345 SDGTRSVRWGRWCPGQXWQAPAW*TRRGCPG*MVLHARLPSASSDPRPDQKHIGNSWFAF 166
S GTRS R GRWCPGQ W PAW*T RGCP *M LPSASS P+P+QK IGNSW A
Sbjct: 376 SHGTRSARSGRWCPGQPWPVPAW*THRGCPS*MAQCDHLPSASSTPQPNQKRIGNSWSAC 555
Query: 165 HHHKPSMAXSSVPEQRXN*QHGHRQCTCEGH 73
H KPS A S PEQ+ *QHGHRQCTC GH
Sbjct: 556 HRRKPSKAPSLAPEQQSC*QHGHRQCTCVGH 648
Score = 28.6 bits (56), Expect(3) = 1e-088
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +2 / -2
Query: 554 FWWPASSCLVG 586
FWWPASS L+G
Sbjct: 173 FWWPASSFLLG 141
Score = 28.1 bits (55), Expect(3) = 1e-088
Identities = 8/12 (66%), Positives = 12/12 (100%)
Frame = +2 / -3
Query: 644 EIPWLML*CYSF 679
++PWL++*CYSF
Sbjct: 82 KLPWLLV*CYSF 47
Score = 24.4 bits (47), Expect(3) = 1e-075
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = -2 / +1
Query: 585 PTKQLEAGHQKF 550
P ++LEAGHQ F
Sbjct: 142 PRRKLEAGHQNF 177
Score = 22.1 bits (42), Expect(3) = 1e-075
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = -2 / +3
Query: 681 EKE*HYSINQG 649
+KE*HY+ NQG
Sbjct: 45 KKE*HYTNNQG 77
Score = 21.7 bits (41), Expect(3) = 1e-048
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +1 / -1
Query: 499 PPPETSKARTEEEHGTWKFLVACF*L 576
PPP ++ ++ LVACF*L
Sbjct: 228 PPPPPKASKE*TGVQYYEILVACF*L 151
Score = 21.7 bits (41), Expect(3) = 1e-048
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3 / -2
Query: 45 VXIARIFNTYGP 80
V IARIFNT P
Sbjct: 677 VRIARIFNTLWP 642
>gb|BF258204.2|BF258204 HVSMEf0015B12f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0015B12f, mRNA sequence
Length = 749
Score = 300 bits (649), Expect(2) = 4e-083
Identities = 124/145 (85%), Positives = 131/145 (90%)
Frame = +3 / +1
Query: 81 RMCIDDGRVVS*XVAQALXXEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHVGPFNLG 260
RMCIDDGRVVS VAQAL EPLTVYGDGKQTRSFQYVSDLVEGLM+LMEG+H+GPFNLG
Sbjct: 1 RMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMRLMEGDHIGPFNLG 180
Query: 261 NPGEFTMLELAXVVQDTIDPNARIEFRQNTXDDPHKRKPDIGRAKELLGWEPKIPLREGL 440
NPGEFTMLELA VVQDTIDPNARIEFR+NT DDPHKRKPDI +AKE LGWEPKI LR+GL
Sbjct: 181 NPGEFTMLELAKVVQDTIDPNARIEFRENTQDDPHKRKPDITKAKEQLGWEPKIALRDGL 360
Query: 441 PLMVTDFRKRIFGDQDTAAATPGNQ 515
PLMVTDFRKRIFGDQD+AA Q
Sbjct: 361 PLMVTDFRKRIFGDQDSAATATEGQ 435
Score = 267 bits (578), Expect(2) = 4e-072
Identities = 116/144 (80%), Positives = 121/144 (84%)
Frame = -1 / -1
Query: 514 WFPGVAAAVSWSPKMRLRKSVTMRGRPSRRGIFGSHPRSSLARPMSGLRLCGSSWVF*RN 335
W AA+SWSP +RLRKSVTMRGRPSRR I GSHP SLA +SGLRLCGSSWVF RN
Sbjct: 434 WPSVAVAALSWSPNIRLRKSVTMRGRPSRRAILGSHPSCSLALVISGLRLCGSSWVFSRN 255
Query: 334 SIRALGSMVSWTTLASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP* 155
SIRA GSMVSWTTLASSSMVNSPGLP+LNGP SPSIS I PST+SETYWKLLVC PSP*
Sbjct: 254 SIRAFGSMVSWTTLASSSMVNSPGLPKLNGPM*SPSISLINPSTKSETYWKLLVCLPSP* 75
Query: 154 TVNGSFXSA*ATX*LTTRPSSMHM 83
TV GSF SA*AT LTTRPSSMHM
Sbjct: 74 TVKGSFLSA*ATKLLTTRPSSMHM 3
Score = 184 bits (397), Expect = 4e-046
Identities = 83/132 (62%), Positives = 95/132 (71%)
Frame = -3 / -3
Query: 476 EDALAEVGDHEGKALAEGDLWLPPKELLGTADXXXXXXXXXXXXLTELDPCVGVDGVLDN 297
E LAEVG+HEG+A+ EGDL LPPK LLG D LTELDP V VDGVLDN
Sbjct: 396 EYPLAEVGNHEGEAVTEGDLGLPPKLLLGLGDIWLALVRVVLGVLTELDPRVRVDGVLDN 217
Query: 296 XGKLQHGELAGVAQVKWSYMLAFHQLHQTLDQIRNILETPGLLSITINRQWLXXQCLSNX 117
G+ QHGEL GVAQV+W ++ FHQ HQ L+QIRN+LETPGLL+I +NRQ L LSN
Sbjct: 216 LGQFQHGELTGVAQVEWPNVITFHQPHQPLNQIRNVLETPGLLAIAVNRQRLLP*RLSNK 37
Query: 116 LTDNTAIVNAHA 81
+ DNTAIVNAHA
Sbjct: 36 VADNTAIVNAHA 1
Score = 182 bits (391), Expect = 3e-045
Identities = 76/113 (67%), Positives = 82/113 (72%)
Frame = +2 / +3
Query: 83 HVH*RWPCCQLXRCSGTXEXAIDGLW*WKANQEFPICF*SGRGSDEADGRRACRTI*PGQ 262
HVH*RWPCCQ CSG E A DGL W+A+QEFPI F* G G DEADGR + I GQ
Sbjct: 3 HVH*RWPCCQQLCCSGAKEGAFDGLRRWQADQEFPIRF*FG*GVDEADGR*SHWAIQLGQ 182
Query: 263 PRRVHHAGACQXCPGHHRPQRTDRVPSEHPXRPTQAQARHRPCQGAPWVGAKD 421
PR VHHAG Q CPGHHRP+R DRVP EHP RP QAQAR+ QGA WVGA+D
Sbjct: 183 PR*VHHAGTGQGCPGHHRPERADRVP*EHPGRPAQAQARYHQGQGATWVGAQD 341
Score = 154 bits (331), Expect = 5e-037
Identities = 73/119 (61%), Positives = 76/119 (63%)
Frame = +1 / +2
Query: 82 ACALTMAVLSVXSLLRH*XXSH*RFMVMESKPGVSNMFLIWSRV**S*WKASM*DHLTWA 261
ACALTMAVLS LLR * S *RF M S+PGVSN FLIW R ** *WK H TWA
Sbjct: 2 ACALTMAVLSATLLLRR*GRSL*RFTAMASRPGVSNTFLIWLRG**G*WKVITLGHSTWA 181
Query: 262 TPASSPCWSLPXLSRTPSTPTHGSSSVRXXXXXXXXXXXXXXVPRSSLGGSQRSPSARA 438
TP SSPCW+ P LSRTPST T GSSSVR PRS+LGGS RSPS A
Sbjct: 182 TPVSSPCWNWPRLSRTPSTRTRGSSSVRTPRTTRTSASQISPRPRSNLGGSPRSPSVTA 358
Score = 150 bits (322), Expect = 9e-036
Identities = 60/88 (68%), Positives = 63/88 (71%)
Frame = -2 / -2
Query: 345 SDGTRSVRWGRWCPGQXWQAPAW*TRRGCPG*MVLHARLPSASSDPRPDQKHIGNSWFAF 166
S GTRS R GRWCPGQ W PAW*T RGCP *M LPSASS P+P+QK IGNSW A
Sbjct: 265 SHGTRSARSGRWCPGQPWPVPAW*THRGCPS*MAQCDHLPSASSTPQPNQKRIGNSWSAC 86
Query: 165 HHHKPSMAXSSVPEQRXN*QHGHRQCTC 82
H KPS A S PEQ+ *QHGHRQCTC
Sbjct: 85 HRRKPSKAPSLAPEQQSC*QHGHRQCTC 2
Score = 28.6 bits (56), Expect(2) = 4e-083
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +2 / +3
Query: 554 FWWPASSCLVG 586
FWWPASS L+G
Sbjct: 468 FWWPASSFLLG 500
Score = 24.4 bits (47), Expect(2) = 4e-072
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = -2 / -2
Query: 585 PTKQLEAGHQKF 550
P ++LEAGHQ F
Sbjct: 499 PRRKLEAGHQNF 464
>gb|BF253522.3|BF253522 HVSMEf0001C17f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0001C17f, mRNA sequence
Length = 850
Score = 275 bits (596), Expect(3) = 2e-078
Identities = 113/132 (85%), Positives = 120/132 (90%)
Frame = +3 / +2
Query: 120 VAQALXXEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAXV 299
VAQAL EPLTVYGDGKQTRSFQYVSDLVEGLM+LMEG+H+GPFNLGNPGEFTMLELA V
Sbjct: 8 VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMRLMEGDHIGPFNLGNPGEFTMLELAKV 187
Query: 300 VQDTIDPNARIEFRQNTXDDPHKRKPDIGRAKELLGWEPKIPLREGLPLMVTDFRKRIFG 479
VQDTIDPNARIEFR+NT DDPHKRKPDI +AKE LGWEPKI LR+GLPLMVTDFRKRIFG
Sbjct: 188 VQDTIDPNARIEFRENTQDDPHKRKPDITKAKEQLGWEPKIALRDGLPLMVTDFRKRIFG 367
Query: 480 DQDTAAATPGNQ 515
DQD+AA Q
Sbjct: 368 DQDSAATATEGQ 403
Score = 246 bits (531), Expect(3) = 2e-067
Identities = 106/132 (80%), Positives = 111/132 (84%)
Frame = -1 / -2
Query: 514 WFPGVAAAVSWSPKMRLRKSVTMRGRPSRRGIFGSHPRSSLARPMSGLRLCGSSWVF*RN 335
W AA+SWSP +RLRKSVTMRGRPSRR I GSHP SLA +SGLRLCGSSWVF RN
Sbjct: 402 WPSVAVAALSWSPNIRLRKSVTMRGRPSRRAILGSHPSCSLALVISGLRLCGSSWVFSRN 223
Query: 334 SIRALGSMVSWTTLASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP* 155
SIRA GSMVSWTTLASSSMVNSPGLP+LNGP SPSIS I PST+SETYWKLLVC PSP*
Sbjct: 222 SIRAFGSMVSWTTLASSSMVNSPGLPKLNGPM*SPSISLINPSTKSETYWKLLVCLPSP* 43
Query: 154 TVNGSFXSA*AT 119
TV GSF SA*AT
Sbjct: 42 TVKGSFLSA*AT 7
Score = 161 bits (346), Expect = 5e-039
Identities = 73/119 (61%), Positives = 84/119 (70%)
Frame = -3 / -1
Query: 476 EDALAEVGDHEGKALAEGDLWLPPKELLGTADXXXXXXXXXXXXLTELDPCVGVDGVLDN 297
E LAEVG+HEG+A+ EGDL LPPK LLG D LTELDP V VDGVLDN
Sbjct: 364 EYPLAEVGNHEGEAVTEGDLGLPPKLLLGLGDIWLALVRVVLGVLTELDPRVRVDGVLDN 185
Query: 296 XGKLQHGELAGVAQVKWSYMLAFHQLHQTLDQIRNILETPGLLSITINRQWLXXQCLSN 120
G+ QHGEL GVAQV+W ++ FHQ HQ L+QIRN+LETPGLL+I +NRQ L LSN
Sbjct: 184 LGQFQHGELTGVAQVEWPNVITFHQPHQPLNQIRNVLETPGLLAIAVNRQRLLP*RLSN 8
Score = 154 bits (330), Expect = 7e-037
Identities = 66/100 (66%), Positives = 72/100 (72%)
Frame = +2 / +1
Query: 122 CSGTXEXAIDGLW*WKANQEFPICF*SGRGSDEADGRRACRTI*PGQPRRVHHAGACQXC 301
CSG E A DGL W+A+QEFPI F* G G DEADGR + I GQPR VHHAG Q C
Sbjct: 10 CSGAKEGAFDGLRRWQADQEFPIRF*FG*GVDEADGR*SHWAIQLGQPR*VHHAGTGQGC 189
Query: 302 PGHHRPQRTDRVPSEHPXRPTQAQARHRPCQGAPWVGAKD 421
PGHHRP+R DRVP EHP RP QAQAR+ QGA WVGA+D
Sbjct: 190 PGHHRPERADRVP*EHPGRPAQAQARYHQGQGATWVGAQD 309
Score = 133 bits (286), Expect = 9e-031
Identities = 63/106 (59%), Positives = 66/106 (62%)
Frame = +1 / +3
Query: 121 LLRH*XXSH*RFMVMESKPGVSNMFLIWSRV**S*WKASM*DHLTWATPASSPCWSLPXL 300
LLR * S *RF M S+PGVSN FLIW R ** *WK H TWATP SSPCW+ P L
Sbjct: 9 LLRR*GRSL*RFTAMASRPGVSNTFLIWLRG**G*WKVITLGHSTWATPVSSPCWNWPRL 188
Query: 301 SRTPSTPTHGSSSVRXXXXXXXXXXXXXXVPRSSLGGSQRSPSARA 438
SRTPST T GSSSVR PRS+LGGS RSPS A
Sbjct: 189 SRTPSTRTRGSSSVRTPRTTRTSASQISPRPRSNLGGSPRSPSVTA 326
Score = 123 bits (264), Expect = 9e-028
Identities = 50/76 (65%), Positives = 53/76 (69%)
Frame = -2 / -3
Query: 345 SDGTRSVRWGRWCPGQXWQAPAW*TRRGCPG*MVLHARLPSASSDPRPDQKHIGNSWFAF 166
S GTRS R GRWCPGQ W PAW*T RGCP *M LPSASS P+P+QK IGNSW A
Sbjct: 233 SHGTRSARSGRWCPGQPWPVPAW*THRGCPS*MAQCDHLPSASSTPQPNQKRIGNSWSAC 54
Query: 165 HHHKPSMAXSSVPEQR 118
H KPS A S PEQ+
Sbjct: 53 HRRKPSKAPSLAPEQQ 6
Score = 28.6 bits (56), Expect(3) = 2e-078
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +2 / +1
Query: 554 FWWPASSCLVG 586
FWWPASS L+G
Sbjct: 436 FWWPASSFLLG 468
Score = 27.6 bits (54), Expect(3) = 2e-078
Identities = 8/12 (66%), Positives = 12/12 (100%)
Frame = +2 / +3
Query: 644 EIPWLML*CYSF 679
++PWL++*CYSF
Sbjct: 528 KLPWLVV*CYSF 563
Score = 24.4 bits (47), Expect(3) = 2e-067
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = -2 / -3
Query: 585 PTKQLEAGHQKF 550
P ++LEAGHQ F
Sbjct: 467 PRRKLEAGHQNF 432
Score = 24.4 bits (47), Expect(3) = 2e-067
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = -2 / -1
Query: 687 IQEKE*HYSINQG 649
+ +KE*HY+ NQG
Sbjct: 571 VNKKE*HYTTNQG 533
>gb|BF620279.2|BF620279 HVSMEc0019E20f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0019E20f, mRNA sequence
Length = 677
Score = 286 bits (618), Expect = 1e-076
Identities = 122/147 (82%), Positives = 127/147 (86%)
Frame = +3 / -3
Query: 45 VXIARIFNTYGPRMCIDDGRVVS*XVAQALXXEPLTVYGDGKQTRSFQYVSDLVEGLMKL 224
V IARIF TYGP MCIDDGRVVS VAQAL EPLTVYGDGKQTRSFQYVSDLVE L+KL
Sbjct: 600 VRIARIFITYGPGMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQYVSDLVERLIKL 421
Query: 225 MEGEHVGPFNLGNPGEFTMLELAXVVQDTIDPNARIEFRQNTXDDPHKRKPDIGRAKELL 404
ME EHVGPFNLGNPGEFTMLELA VVQDTIDPNARIEFR +T PHKR+PDI +AKELL
Sbjct: 420 MEEEHVGPFNLGNPGEFTMLELAKVVQDTIDPNARIEFRADTTYSPHKREPDITKAKELL 241
Query: 405 GWEPKIPLREGLPLMVTDFRKRIFGDQ 485
GWEPK+ LR GLPLMV DF RIFGDQ
Sbjct: 240 GWEPKVALRTGLPLMVQDFSTRIFGDQ 160
Score = 241 bits (521), Expect = 3e-063
Identities = 111/147 (75%), Positives = 114/147 (77%)
Frame = -1 / +2
Query: 484 WSPKMRLRKSVTMRGRPSRRGIFGSHPRSSLARPMSGLRLCGSSWVF*RNSIRALGSMVS 305
WSPKMR+ KS TM GRP R GSHP SSLA MSG RLCG V RNSI ALGSMVS
Sbjct: 161 WSPKMRVLKSWTMSGRPVRSATLGSHPSSSLALVMSGSRLCGL*VVSARNSILALGSMVS 340
Query: 304 WTTLASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVNGSFXSA* 125
TTLASSS+VNSPG PRLNGPTCS SIS I STRSETYWKLLVC PSP TV GSF SA
Sbjct: 341 CTTLASSSIVNSPGFPRLNGPTCSSSISLISRSTRSETYWKLLVCLPSPYTVRGSFLSAW 520
Query: 124 ATX*LTTRPSSMHMRGPYVLKIRAIXT 44
AT LTTRPSSMHM GPYV+KIRAI T
Sbjct: 521 ATKLLTTRPSSMHMPGPYVMKIRAILT 601
Score = 141 bits (302), Expect = 5e-033
Identities = 66/142 (46%), Positives = 90/142 (63%)
Frame = -3 / +1
Query: 476 EDALAEVGDHEGKALAEGDLWLPPKELLGTADXXXXXXXXXXXXLTELDPCVGVDGVLDN 297
++A AEV DHE +A E L LPP++LLG D ELDPCVGVDGVL +
Sbjct: 169 KNAGAEVLDHEREACPERHLGLPPEQLLGLGDVRLALVRAVGGVGPELDPCVGVDGVLHH 348
Query: 296 XGKLQHGELAGVAQVKWSYMLAFHQLHQTLDQIRNILETPGLLSITINRQWLXXQCLSNX 117
G+LQH EL V QV+ +++L HQL Q L+QI ++LE P LL++ ++R L +CL +
Sbjct: 349 LGQLQHRELPRVPQVERAHVLLLHQLDQPLNQIGDVLEAPRLLAVAVHR*GLLPKCLGDK 528
Query: 116 LTDNTAIVNAHARAICVEDTCD 51
+ D+ AIV+AHAR + ED D
Sbjct: 529 VADDPAIVDAHARPVRDEDPRD 594
Score = 120 bits (257), Expect = 9e-027
Identities = 58/123 (47%), Positives = 72/123 (58%)
Frame = +2 / -2
Query: 50 DRTYLQHIWPSHVH*RWPCCQLXRCSGTXEXAIDGLW*WKANQEFPICF*SGRGSDEADG 229
DR L H+ HVH RWP Q GT E A +G+ +A++E P+ SG +D+ADG
Sbjct: 595 DRADLHHVRAGHVHRRWPGRQQLCRPGT*EGAPNGVRRRQADEELPVRLRSG*AADQADG 416
Query: 230 RRACRTI*PGQPRRVHHAGACQXCPGHHRPQRTDRVPSEHPXRPTQAQARHRPCQGAPWV 409
A + PG+P VH AGA Q GHHRPQR DRVP H +P QA+A H QGA V
Sbjct: 415 GGARGPVQPGEPGGVHDAGAGQGGAGHHRPQRKDRVPGRHHLQPAQARAGHHQGQGAARV 236
Query: 410 GAK 418
GA+
Sbjct: 235 GAQ 227
>gb|BJ548879.1|BJ548879 BJ548879 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal37k14 3', mRNA sequence
Length = 618
Score = 255 bits (552), Expect(4) = 1e-076
Identities = 103/120 (85%), Positives = 110/120 (91%)
Frame = +3 / -2
Query: 156 YGDGKQTRSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAXVVQDTIDPNARIE 335
YGDGKQTRSFQYVSDLVEGLM+LMEG+H+GPFNLGNPGEFTMLELA VVQDTIDPNARIE
Sbjct: 563 YGDGKQTRSFQYVSDLVEGLMRLMEGDHIGPFNLGNPGEFTMLELAKVVQDTIDPNARIE 384
Query: 336 FRQNTXDDPHKRKPDIGRAKELLGWEPKIPLREGLPLMVTDFRKRIFGDQDTAAATPGNQ 515
FR+NT DDPHKRKPDI +AKE LGWEPKI LR+GLPLMVTDFRKRIFGDQD+AA Q
Sbjct: 383 FRENTQDDPHKRKPDITKAKEQLGWEPKIALRDGLPLMVTDFRKRIFGDQDSAATATEGQ 204
Score = 226 bits (489), Expect(4) = 1e-063
Identities = 96/120 (80%), Positives = 101/120 (84%)
Frame = -1 / +1
Query: 514 WFPGVAAAVSWSPKMRLRKSVTMRGRPSRRGIFGSHPRSSLARPMSGLRLCGSSWVF*RN 335
W AA+SWSP +RLRKSVTMRGRPSRR I GSHP SLA +SGLRLCGSSWVF RN
Sbjct: 205 WPSVAVAALSWSPNIRLRKSVTMRGRPSRRAILGSHPSCSLALVISGLRLCGSSWVFSRN 384
Query: 334 SIRALGSMVSWTTLASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP* 155
SIRA GSMVSWTTLASSSMVNSPGLP+LNGP SPSIS I PST+SETYWKLLVC PSP*
Sbjct: 385 SIRAFGSMVSWTTLASSSMVNSPGLPKLNGPM*SPSISLINPSTKSETYWKLLVCLPSP* 564
Score = 151 bits (325), Expect(2) = 1e-037
Identities = 66/107 (61%), Positives = 77/107 (71%)
Frame = -3 / +3
Query: 476 EDALAEVGDHEGKALAEGDLWLPPKELLGTADXXXXXXXXXXXXLTELDPCVGVDGVLDN 297
E LAEVG+HEG+A+ EGDL LPPK LLG D LTELDP V VDGVLDN
Sbjct: 243 EYPLAEVGNHEGEAVTEGDLGLPPKLLLGLGDIWLALVRVVLGVLTELDPRVRVDGVLDN 422
Query: 296 XGKLQHGELAGVAQVKWSYMLAFHQLHQTLDQIRNILETPGLLSITI 156
G+ QHGEL GVAQV+W ++ FHQ HQ L+QIRN+LETPGLL+I +
Sbjct: 423 LGQFQHGELTGVAQVEWPNVITFHQPHQPLNQIRNVLETPGLLAIAV 563
Score = 138 bits (295), Expect(3) = 9e-035
Identities = 58/86 (67%), Positives = 64/86 (74%)
Frame = +2 / -1
Query: 164 WKANQEFPICF*SGRGSDEADGRRACRTI*PGQPRRVHHAGACQXCPGHHRPQRTDRVPS 343
W+A+QEFPI F* G G DEADGR + I GQPR VHHAG Q CPGHHRP+R DRVP
Sbjct: 555 WQADQEFPIRF*FG*GVDEADGR*SHWAIQLGQPR*VHHAGTGQGCPGHHRPERADRVP* 376
Query: 344 EHPXRPTQAQARHRPCQGAPWVGAKD 421
EHP RP QAQAR+ QGA WVGA+D
Sbjct: 375 EHPGRPAQAQARYHQGQGATWVGAQD 298
Score = 125 bits (267), Expect = 4e-028
Identities = 56/95 (58%), Positives = 59/95 (62%)
Frame = +1 / -3
Query: 154 FMVMESKPGVSNMFLIWSRV**S*WKASM*DHLTWATPASSPCWSLPXLSRTPSTPTHGS 333
F M S+PGVSN FLIW R ** *WK H TWATP SSPCW+ P LSRTPST T GS
Sbjct: 565 FTAMASRPGVSNTFLIWLRG**G*WKVITLGHSTWATPVSSPCWNWPRLSRTPSTRTRGS 386
Query: 334 SSVRXXXXXXXXXXXXXXVPRSSLGGSQRSPSARA 438
SSVR PRS+LGGS RSPS A
Sbjct: 385 SSVRTPRTTRTSASQISPRPRSNLGGSPRSPSVTA 281
Score = 109 bits (232), Expect = 2e-023
Identities = 43/64 (67%), Positives = 45/64 (70%)
Frame = -2 / +2
Query: 345 SDGTRSVRWGRWCPGQXWQAPAW*TRRGCPG*MVLHARLPSASSDPRPDQKHIGNSWFAF 166
S GTRS R GRWCPGQ W PAW*T RGCP *M LPSASS P+P+QK IGNSW A
Sbjct: 374 SHGTRSARSGRWCPGQPWPVPAW*THRGCPS*MAQCDHLPSASSTPQPNQKRIGNSWSAC 553
Query: 165 HHHK 154
H K
Sbjct: 554 HRRK 565
Score = 30.4 bits (60), Expect(4) = 1e-076
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +2 / -1
Query: 554 FWWPASSCLVGPP 592
FWWPASS L+G P
Sbjct: 171 FWWPASSFLLGYP 133
Score = 29.5 bits (58), Expect(4) = 1e-076
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +2 / -3
Query: 620 VVRRECVAEIPWLML*CYSF 679
VV ++PWL++*CYSF
Sbjct: 106 VVESFTTTKLPWLLV*CYSF 47
Score = 28.6 bits (56), Expect(4) = 1e-076
Identities = 14/18 (77%), Positives = 14/18 (77%)
Frame = +3 / -1
Query: 102 RVVS*XVAQALXXEPLTV 155
RVVS VAQAL EPLTV
Sbjct: 618 RVVSNFVAQALRKEPLTV 565
Score = 28.1 bits (55), Expect(3) = 9e-035
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +2 / -3
Query: 104 CCQLXRCSGTXEXAIDG 154
CCQ CSG E A DG
Sbjct: 616 CCQQLCCSGAKEGAFDG 566
Score = 26.3 bits (51), Expect(4) = 1e-063
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1 / +2
Query: 154 TVNGSFXSA*ATX*LTT 104
TV GSF SA*AT LTT
Sbjct: 566 TVKGSFLSA*ATKLLTT 616
Score = 25.4 bits (49), Expect(4) = 1e-063
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = -2 / +2
Query: 591 GGPTKQLEAGHQKF 550
G P ++LEAGHQ F
Sbjct: 134 G*PRRKLEAGHQNF 175
Score = 24.9 bits (48), Expect(2) = 1e-037
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -2 / +3
Query: 156 KPSMAXSSVPEQRXN*QH 103
KPS A S PEQ+ *QH
Sbjct: 564 KPSKAPSLAPEQQSC*QH 617
Score = 22.1 bits (42), Expect(4) = 1e-063
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = -2 / +3
Query: 681 EKE*HYSINQG 649
+KE*HY+ NQG
Sbjct: 45 KKE*HYTNNQG 77
Score = 21.7 bits (41), Expect(3) = 9e-035
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +1 / -3
Query: 499 PPPETSKARTEEEHGTWKFLVACF*L 576
PPP ++ ++ LVACF*L
Sbjct: 226 PPPPPKASKE*TGVQYYEILVACF*L 149
>gb|BJ449493.1|BJ449493 BJ449493 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak25e05 5', mRNA sequence
Length = 398
Score = 276 bits (597), Expect = 1e-073
Identities = 115/125 (92%), Positives = 116/125 (92%)
Frame = +3 / +1
Query: 45 VXIARIFNTYGPRMCIDDGRVVS*XVAQALXXEPLTVYGDGKQTRSFQYVSDLVEGLMKL 224
V IARIFNTYGPRMCIDDGRVVS VAQAL EPLTVYGDGKQTRSFQYVSDLVEGLMKL
Sbjct: 22 VRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKL 201
Query: 225 MEGEHVGPFNLGNPGEFTMLELAXVVQDTIDPNARIEFRQNTXDDPHKRKPDIGRAKELL 404
MEGEHVGPFNLGNPGEFTMLELA VVQDTIDPNARIEFR NT DDPHKRKPDI +AKELL
Sbjct: 202 MEGEHVGPFNLGNPGEFTMLELAKVVQDTIDPNARIEFRANTADDPHKRKPDITKAKELL 381
Query: 405 GWEPK 419
GWEPK
Sbjct: 382 GWEPK 396
Score = 229 bits (494), Expect = 2e-059
Identities = 104/124 (83%), Positives = 105/124 (84%)
Frame = -1 / -1
Query: 415 GSHPRSSLARPMSGLRLCGSSWVF*RNSIRALGSMVSWTTLASSSMVNSPGLPRLNGPTC 236
GSHP SSLA MSGLRLCGSS V RNSI ALGSMVS TTLASSS+VNSPG PRLNGPTC
Sbjct: 392 GSHPSSSLALVMSGLRLCGSSAVLARNSILALGSMVSCTTLASSSIVNSPGFPRLNGPTC 213
Query: 235 SPSISFIRPSTRSETYWKLLVCFPSP*TVNGSFXSA*ATX*LTTRPSSMHMRGPYVLKIR 56
SPSISFI PSTRSETYWKLLVC PSP TV GSF SA AT LTTRPSSMHMRGP VLKIR
Sbjct: 212 SPSISFISPSTRSETYWKLLVCLPSPYTVRGSFLSAWATKLLTTRPSSMHMRGP*VLKIR 33
Query: 55 AIXT 44
AI T
Sbjct: 32 AILT 21
Score = 138 bits (295), Expect = 5e-032
Identities = 61/123 (49%), Positives = 80/123 (65%)
Frame = -3 / -3
Query: 419 LWLPPKELLGTADXXXXXXXXXXXXLTELDPCVGVDGVLDNXGKLQHGELAGVAQVKWSY 240
L LPP++LLG D ELDPCVGVDGVL + G+LQH EL V QV+ +
Sbjct: 396 LGLPPEQLLGLGDVRLALVRVVGGVGPELDPCVGVDGVLHHLGQLQHRELPRVPQVERPH 217
Query: 239 MLAFHQLHQTLDQIRNILETPGLLSITINRQWLXXQCLSNXLTDNTAIVNAHARAICVED 60
+L HQLHQ L+QI ++LE P LL++ ++RQ L QCL + + D+ AIV+AHAR + VED
Sbjct: 216 VLPLHQLHQPLNQIGDVLEAPRLLAVAVHRQGLLPQCLGDKVADDPAIVDAHARPVGVED 37
Query: 59 TCD 51
D
Sbjct: 36 PRD 28
Score = 135 bits (290), Expect = 2e-031
Identities = 64/123 (52%), Positives = 76/123 (61%)
Frame = +2 / +3
Query: 50 DRTYLQHIWPSHVH*RWPCCQLXRCSGTXEXAIDGLW*WKANQEFPICF*SGRGSDEADG 229
DR LQH+ +HVH RWP Q GT E A DG+ +A++E P+ SG G+DEADG
Sbjct: 27 DRADLQHLRAAHVHRRWPGRQQLCRPGTEEGAPDGVRRRQADEELPVRLRSG*GADEADG 206
Query: 230 RRACRTI*PGQPRRVHHAGACQXCPGHHRPQRTDRVPSEHPXRPTQAQARHRPCQGAPWV 409
A + PG+P VH AGA Q GHHRPQR DRVP +H RP QAQA H QGA V
Sbjct: 207 GGARGAVQPGEPGGVHDAGAGQGGAGHHRPQRKDRVPGQHRRRPAQAQAGHHQGQGAARV 386
Query: 410 GAK 418
GA+
Sbjct: 387 GAQ 395
Score = 117 bits (250), Expect = 8e-026
Identities = 52/97 (53%), Positives = 61/97 (62%)
Frame = -2 / -2
Query: 339 GTRSVRWGRWCPGQXWQAPAW*TRRGCPG*MVLHARLPSASSDPRPDQKHIGNSWFAFHH 160
GTRS+RWGRWCP W APA *T G PG* A PSASS P+PD++ G+S A
Sbjct: 316 GTRSLRWGRWCPAPPWPAPAS*TPPGSPG*TAPRAPPPSASSAPQPDRRRTGSSSSACRR 137
Query: 159 HKPSMAXSSVPEQRXN*QHGHRQCTCEGHMC*RYVRS 49
PS A SSVP ++ *+ GHR+CTC C*R RS
Sbjct: 136 RTPSGAPSSVPGRQSC*RPGHRRCTCAARRC*RSARS 26
>gb|BU970828.1|BU970828 HB15M21r BC Hordeum vulgare subsp. vulgare cDNA clone HB15M21
5-PRIME, mRNA sequence
Length = 492
Score = 267 bits (577), Expect(2) = 2e-073
Identities = 108/125 (86%), Positives = 115/125 (92%)
Frame = +3 / +2
Query: 141 EPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAXVVQDTIDP 320
EPLTVYGDGKQTRSFQYVSDLVEGLM+LMEG+H+GPFNLGNPGEFTMLELA VVQDTIDP
Sbjct: 11 EPLTVYGDGKQTRSFQYVSDLVEGLMRLMEGDHIGPFNLGNPGEFTMLELAKVVQDTIDP 190
Query: 321 NARIEFRQNTXDDPHKRKPDIGRAKELLGWEPKIPLREGLPLMVTDFRKRIFGDQDTAAA 500
NARIEFR+NT DDPHKRKPDI +AKE LGWEPKI LR+GLPLMVTDFRKRIFGDQD+AA
Sbjct: 191 NARIEFRENTQDDPHKRKPDITKAKEQLGWEPKIALRDGLPLMVTDFRKRIFGDQDSAAT 370
Query: 501 TPGNQ 515
Q
Sbjct: 371 ATEGQ 385
Score = 235 bits (508), Expect(2) = 3e-062
Identities = 100/125 (80%), Positives = 105/125 (84%)
Frame = -1 / -1
Query: 514 WFPGVAAAVSWSPKMRLRKSVTMRGRPSRRGIFGSHPRSSLARPMSGLRLCGSSWVF*RN 335
W AA+SWSP +RLRKSVTMRGRPSRR I GSHP SLA +SGLRLCGSSWVF RN
Sbjct: 384 WPSVAVAALSWSPNIRLRKSVTMRGRPSRRAILGSHPSCSLALVISGLRLCGSSWVFSRN 205
Query: 334 SIRALGSMVSWTTLASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP* 155
SIRA GSMVSWTTLASSSMVNSPGLP+LNGP SPSIS I PST+SETYWKLLVC PSP*
Sbjct: 204 SIRAFGSMVSWTTLASSSMVNSPGLPKLNGPM*SPSISLINPSTKSETYWKLLVCLPSP* 25
Query: 154 TVNGS 140
TV GS
Sbjct: 24 TVKGS 10
Score = 157 bits (338), Expect = 6e-038
Identities = 69/112 (61%), Positives = 81/112 (72%)
Frame = -3 / -3
Query: 476 EDALAEVGDHEGKALAEGDLWLPPKELLGTADXXXXXXXXXXXXLTELDPCVGVDGVLDN 297
E LAEVG+HEG+A+ EGDL LPP+ LLG D LTELDP V VDGVLDN
Sbjct: 346 EYPLAEVGNHEGEAVTEGDLGLPPELLLGLGDIWLALVRVVLGVLTELDPRVRVDGVLDN 167
Query: 296 XGKLQHGELAGVAQVKWSYMLAFHQLHQTLDQIRNILETPGLLSITINRQWL 141
G+ QHGEL GVAQV+W ++ FHQ HQ L+QIRN+LETPGLL+I +NRQ L
Sbjct: 166 LGQFQHGELTGVAQVEWPNVITFHQPHQPLNQIRNVLETPGLLAIAVNRQRL 11
Score = 139 bits (298), Expect(2) = 2e-032
Identities = 62/95 (65%), Positives = 68/95 (71%)
Frame = +2 / +1
Query: 137 EXAIDGLW*WKANQEFPICF*SGRGSDEADGRRACRTI*PGQPRRVHHAGACQXCPGHHR 316
E A DGL W+A+QEFPI F* G G DEADGR + I GQPR VHHAG Q CPGHHR
Sbjct: 7 EGAFDGLRRWQADQEFPIRF*FG*GVDEADGR*SHWAIQLGQPR*VHHAGTGQGCPGHHR 186
Query: 317 PQRTDRVPSEHPXRPTQAQARHRPCQGAPWVGAKD 421
P+R DRVP EHP RP QAQAR+ QGA VGA+D
Sbjct: 187 PERADRVP*EHPGRPAQAQARYHQGQGATRVGAQD 291
Score = 125 bits (268), Expect = 3e-028
Identities = 58/99 (58%), Positives = 61/99 (61%)
Frame = +1 / +3
Query: 142 SH*RFMVMESKPGVSNMFLIWSRV**S*WKASM*DHLTWATPASSPCWSLPXLSRTPSTP 321
S *RF M S+PGVSN FLIW R ** *WK H TWATP SSPCW+ P LSRTPST
Sbjct: 12 SL*RFTAMASRPGVSNTFLIWLRG**G*WKVITLGHSTWATPVSSPCWNWPRLSRTPSTR 191
Query: 322 THGSSSVRXXXXXXXXXXXXXXVPRSSLGGSQRSPSARA 438
T GSSSVR PRS+ GGS RSPS A
Sbjct: 192 TRGSSSVRTPRTTRTSASQISPRPRSNSGGSPRSPSVTA 308
Score = 116 bits (248), Expect = 2e-025
Identities = 47/70 (67%), Positives = 49/70 (70%)
Frame = -2 / -2
Query: 345 SDGTRSVRWGRWCPGQXWQAPAW*TRRGCPG*MVLHARLPSASSDPRPDQKHIGNSWFAF 166
S GTRS R GRWCPGQ W PAW*T RGCP *M LPSASS P+P+QK IGNSW A
Sbjct: 215 SHGTRSARSGRWCPGQPWPVPAW*THRGCPS*MAQCDHLPSASSTPQPNQKRIGNSWSAC 36
Query: 165 HHHKPSMAXS 136
H KPS A S
Sbjct: 35 HRRKPSKAPS 6
Score = 29.0 bits (57), Expect(2) = 2e-073
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +2 / +1
Query: 554 FWWPASSCLVG 586
FWWPASS L+G
Sbjct: 418 FWWPASSLLLG 450
Score = 23.5 bits (45), Expect(2) = 3e-062
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -2 / -2
Query: 585 PTKQLEAGHQKF 550
P +LEAGHQ F
Sbjct: 449 PRSKLEAGHQNF 414
Score = 21.7 bits (41), Expect(2) = 2e-032
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +1 / +3
Query: 499 PPPETSKARTEEEHGTWKFLVACF*L 576
PPP ++ ++ LVACF*L
Sbjct: 363 PPPPPKASKE*TGVQYYEILVACF*L 440
>gb|BJ546337.1|BJ546337 BJ546337 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak39a18 3', mRNA sequence
Length = 514
Score = 267 bits (577), Expect(2) = 3e-073
Identities = 108/125 (86%), Positives = 115/125 (92%)
Frame = +3 / -3
Query: 141 EPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAXVVQDTIDP 320
EPLTVYGDGKQTRSFQYVSDLVEGLM+LMEG+H+GPFNLGNPGEFTMLELA VVQDTIDP
Sbjct: 506 EPLTVYGDGKQTRSFQYVSDLVEGLMRLMEGDHIGPFNLGNPGEFTMLELAKVVQDTIDP 327
Query: 321 NARIEFRQNTXDDPHKRKPDIGRAKELLGWEPKIPLREGLPLMVTDFRKRIFGDQDTAAA 500
NARIEFR+NT DDPHKRKPDI +AKE LGWEPKI LR+GLPLMVTDFRKRIFGDQD+AA
Sbjct: 326 NARIEFRENTQDDPHKRKPDITKAKEQLGWEPKIALRDGLPLMVTDFRKRIFGDQDSAAT 147
Query: 501 TPGNQ 515
Q
Sbjct: 146 ATEGQ 132
Score = 238 bits (514), Expect(2) = 2e-063
Identities = 101/126 (80%), Positives = 106/126 (84%)
Frame = -1 / +1
Query: 514 WFPGVAAAVSWSPKMRLRKSVTMRGRPSRRGIFGSHPRSSLARPMSGLRLCGSSWVF*RN 335
W AA+SWSP +RLRKSVTMRGRPSRR I GSHP SLA +SGLRLCGSSWVF RN
Sbjct: 133 WPSVAVAALSWSPNIRLRKSVTMRGRPSRRAILGSHPSCSLALVISGLRLCGSSWVFSRN 312
Query: 334 SIRALGSMVSWTTLASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP* 155
SIRA GSMVSWTTLASSSMVNSPGLP+LNGP SPSIS I PST+SETYWKLLVC PSP*
Sbjct: 313 SIRAFGSMVSWTTLASSSMVNSPGLPKLNGPM*SPSISLINPSTKSETYWKLLVCLPSP* 492
Query: 154 TVNGSF 137
TV GSF
Sbjct: 493 TVKGSF 510
Score = 159 bits (342), Expect = 2e-038
Identities = 70/112 (62%), Positives = 81/112 (72%)
Frame = -3 / +3
Query: 476 EDALAEVGDHEGKALAEGDLWLPPKELLGTADXXXXXXXXXXXXLTELDPCVGVDGVLDN 297
E LAEVG+HEG+A+ EGDL LPPK LLG D LTELDP V VDGVLDN
Sbjct: 171 EYPLAEVGNHEGEAVTEGDLGLPPKLLLGLGDIWLALVRVVLGVLTELDPRVRVDGVLDN 350
Query: 296 XGKLQHGELAGVAQVKWSYMLAFHQLHQTLDQIRNILETPGLLSITINRQWL 141
G+ QHGEL GVAQV+W ++ FHQ HQ L+QIRN+LETPGLL+I +NRQ L
Sbjct: 351 LGQFQHGELTGVAQVEWPNVITFHQPHQPLNQIRNVLETPGLLAIAVNRQRL 506
Score = 145 bits (312), Expect(2) = 2e-034
Identities = 63/95 (66%), Positives = 69/95 (72%)
Frame = +2 / -2
Query: 137 EXAIDGLW*WKANQEFPICF*SGRGSDEADGRRACRTI*PGQPRRVHHAGACQXCPGHHR 316
E A DGL W+A+QEFPI F* G G DEADGR + I GQPR VHHAG Q CPGHHR
Sbjct: 510 EGAFDGLRRWQADQEFPIRF*FG*GVDEADGR*SHWAIQLGQPR*VHHAGTGQGCPGHHR 331
Query: 317 PQRTDRVPSEHPXRPTQAQARHRPCQGAPWVGAKD 421
P+R DRVP EHP RP QAQAR+ QGA WVGA+D
Sbjct: 330 PERADRVP*EHPGRPAQAQARYHQGQGATWVGAQD 226
Score = 128 bits (274), Expect = 4e-029
Identities = 59/99 (59%), Positives = 62/99 (62%)
Frame = +1 / -1
Query: 142 SH*RFMVMESKPGVSNMFLIWSRV**S*WKASM*DHLTWATPASSPCWSLPXLSRTPSTP 321
S *RF M S+PGVSN FLIW R ** *WK H TWATP SSPCW+ P LSRTPST
Sbjct: 505 SL*RFTAMASRPGVSNTFLIWLRG**G*WKVITLGHSTWATPVSSPCWNWPRLSRTPSTR 326
Query: 322 THGSSSVRXXXXXXXXXXXXXXVPRSSLGGSQRSPSARA 438
T GSSSVR PRS+LGGS RSPS A
Sbjct: 325 TRGSSSVRTPRTTRTSASQISPRPRSNLGGSPRSPSVTA 209
Score = 116 bits (248), Expect = 2e-025
Identities = 47/70 (67%), Positives = 49/70 (70%)
Frame = -2 / +2
Query: 345 SDGTRSVRWGRWCPGQXWQAPAW*TRRGCPG*MVLHARLPSASSDPRPDQKHIGNSWFAF 166
S GTRS R GRWCPGQ W PAW*T RGCP *M LPSASS P+P+QK IGNSW A
Sbjct: 302 SHGTRSARSGRWCPGQPWPVPAW*THRGCPS*MAQCDHLPSASSTPQPNQKRIGNSWSAC 481
Query: 165 HHHKPSMAXS 136
H KPS A S
Sbjct: 482 HRRKPSKAPS 511
Score = 28.6 bits (56), Expect(2) = 3e-073
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +2 / -2
Query: 554 FWWPASSCLVG 586
FWWPASS L+G
Sbjct: 99 FWWPASSFLLG 67
Score = 24.4 bits (47), Expect(2) = 2e-063
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = -2 / +2
Query: 585 PTKQLEAGHQKF 550
P ++LEAGHQ F
Sbjct: 68 PRRKLEAGHQNF 103
Score = 21.7 bits (41), Expect(2) = 2e-034
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +1 / -1
Query: 499 PPPETSKARTEEEHGTWKFLVACF*L 576
PPP ++ ++ LVACF*L
Sbjct: 154 PPPPPKASKE*TGVQYYEILVACF*L 77
>gb|CA002810.1|CA002810 HS08J14r HS Hordeum vulgare subsp. vulgare cDNA clone HS08J14
5-PRIME, mRNA sequence
Length = 466
Score = 273 bits (590), Expect = 1e-072
Identities = 112/126 (88%), Positives = 117/126 (92%)
Frame = +3 / +2
Query: 45 VXIARIFNTYGPRMCIDDGRVVS*XVAQALXXEPLTVYGDGKQTRSFQYVSDLVEGLMKL 224
V IARIFNTYGPRMCIDDGRVVS VAQAL EPLTVYGDGKQTRSFQYVSDLVEGLM+L
Sbjct: 89 VRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMRL 268
Query: 225 MEGEHVGPFNLGNPGEFTMLELAXVVQDTIDPNARIEFRQNTXDDPHKRKPDIGRAKELL 404
MEG+H+GPFNLGNPGEFTMLELA VVQDTIDPNARIEFR+NT DDPHKRKPDI +AKE L
Sbjct: 269 MEGDHIGPFNLGNPGEFTMLELAKVVQDTIDPNARIEFRENTQDDPHKRKPDITKAKEQL 448
Query: 405 GWEPKI 422
GWEPKI
Sbjct: 449 GWEPKI 466
Score = 237 bits (513), Expect(2) = 3e-064
Identities = 105/126 (83%), Positives = 108/126 (85%)
Frame = -1 / -2
Query: 421 IFGSHPRSSLARPMSGLRLCGSSWVF*RNSIRALGSMVSWTTLASSSMVNSPGLPRLNGP 242
I GSHP SLA +SGLRLCGSSWVF RNSIRA GSMVSWTTLASSSMVNSPGLP+LNGP
Sbjct: 465 ILGSHPSCSLALVISGLRLCGSSWVFSRNSIRAFGSMVSWTTLASSSMVNSPGLPKLNGP 286
Query: 241 TCSPSISFIRPSTRSETYWKLLVCFPSP*TVNGSFXSA*ATX*LTTRPSSMHMRGPYVLK 62
SPSIS I PST+SETYWKLLVC PSP*TV GSF SA*AT LTTRPSSMHMRGP VLK
Sbjct: 285 M*SPSISLINPSTKSETYWKLLVCLPSP*TVKGSFLSA*ATKLLTTRPSSMHMRGP*VLK 106
Query: 61 IRAIXT 44
IRAI T
Sbjct: 105 IRAILT 88
Score = 189 bits (407), Expect = 2e-047
Identities = 80/124 (64%), Positives = 89/124 (71%)
Frame = +2 / +1
Query: 50 DRTYLQHIWPSHVH*RWPCCQLXRCSGTXEXAIDGLW*WKANQEFPICF*SGRGSDEADG 229
D + L H+WP+HVH*RWPCCQ CSG E A DGL W+A+QEFPI F* G G DEADG
Sbjct: 94 DCSDL*HLWPAHVH*RWPCCQQLCCSGAKEGAFDGLRRWQADQEFPIRF*FG*GVDEADG 273
Query: 230 RRACRTI*PGQPRRVHHAGACQXCPGHHRPQRTDRVPSEHPXRPTQAQARHRPCQGAPWV 409
R + I GQPR VHHAG Q CPGHHRP+R DRVP EHP RP QAQAR+ QGA V
Sbjct: 274 R*SHWAIQLGQPR*VHHAGTGQGCPGHHRPERADRVP*EHPGRPAQAQARYHQGQGATRV 453
Query: 410 GAKD 421
GA+D
Sbjct: 454 GAQD 465
Score = 166 bits (357), Expect = 1e-040
Identities = 76/129 (58%), Positives = 90/129 (69%)
Frame = -3 / -1
Query: 422 DLWLPPKELLGTADXXXXXXXXXXXXLTELDPCVGVDGVLDNXGKLQHGELAGVAQVKWS 243
DL LPP+ LLG D LTELDP V VDGVLDN G+ QHGEL GVAQV+W
Sbjct: 466 DLGLPPELLLGLGDIWLALVRVVLGVLTELDPRVRVDGVLDNLGQFQHGELTGVAQVEWP 287
Query: 242 YMLAFHQLHQTLDQIRNILETPGLLSITINRQWLXXQCLSNXLTDNTAIVNAHARAICVE 63
++ FHQ HQ L+QIRN+LETPGLL+I +NRQ L LSN + DNTAIVNAHARAI V+
Sbjct: 286 NVITFHQPHQPLNQIRNVLETPGLLAIAVNRQRLLP*RLSNKVADNTAIVNAHARAIGVK 107
Query: 62 DTCDXNSRL 36
D + N ++
Sbjct: 106 DPSNPNLKV 80
Score = 163 bits (351), Expect = 9e-040
Identities = 67/100 (67%), Positives = 71/100 (71%)
Frame = -2 / -3
Query: 345 SDGTRSVRWGRWCPGQXWQAPAW*TRRGCPG*MVLHARLPSASSDPRPDQKHIGNSWFAF 166
S GTRS R GRWCPGQ W PAW*T RGCP *M LPSASS P+P+QK IGNSW A
Sbjct: 389 SHGTRSARSGRWCPGQPWPVPAW*THRGCPS*MAQCDHLPSASSTPQPNQKRIGNSWSAC 210
Query: 165 HHHKPSMAXSSVPEQRXN*QHGHRQCTCEGHMC*RYVRS* 46
H KPS A S PEQ+ *QHGHRQCTC GH C*R +S*
Sbjct: 209 HRRKPSKAPSLAPEQQSC*QHGHRQCTCAGHRC*RSEQS* 90
Score = 149 bits (319), Expect = 2e-035
Identities = 72/120 (60%), Positives = 75/120 (62%)
Frame = +1 / +3
Query: 61 SSTHMALACALTMAVLSVXSLLRH*XXSH*RFMVMESKPGVSNMFLIWSRV**S*WKASM 240
S T MA ACALTMAVLS LLR * S *RF M S+PGVSN FLIW R ** *WK
Sbjct: 105 SLTPMARACALTMAVLSATLLLRR*GRSL*RFTAMASRPGVSNTFLIWLRG**G*WKVIT 284
Query: 241 *DHLTWATPASSPCWSLPXLSRTPSTPTHGSSSVRXXXXXXXXXXXXXXVPRSSLGGSQR 420
H TWATP SSPCW+ P LSRTPST T GSSSVR PRS+ GGS R
Sbjct: 285 LGHSTWATPVSSPCWNWPRLSRTPSTRTRGSSSVRTPRTTRTSASQISPRPRSNSGGSPR 464
Score = 27.6 bits (54), Expect(2) = 3e-064
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = -3 / -3
Query: 32 HGGNPWSRF 6
HGG+PWSRF
Sbjct: 74 HGGSPWSRF 48
>gb|BI958920.1|BI958920 HVSMEn0017D23f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0017D23f, mRNA sequence
Length = 648
Score = 258 bits (558), Expect(3) = 1e-072
Identities = 107/128 (83%), Positives = 114/128 (89%)
Frame = +3 / -1
Query: 132 LXXEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAXVVQDT 311
L E LTV GDGKQTRSFQYVSDLVEGLM+LMEG+H+GPFNLGNPGEFTMLELA VVQDT
Sbjct: 645 LRKELLTV*GDGKQTRSFQYVSDLVEGLMRLMEGDHIGPFNLGNPGEFTMLELAKVVQDT 466
Query: 312 IDPNARIEFRQNTXDDPHKRKPDIGRAKELLGWEPKIPLREGLPLMVTDFRKRIFGDQDT 491
IDPNARIEFR+NT DDPHKRKPDI +AKE LGWEPKI LR+GLPLMVTDFRKRIFGDQD+
Sbjct: 465 IDPNARIEFRENTQDDPHKRKPDITKAKEQLGWEPKIALRDGLPLMVTDFRKRIFGDQDS 286
Query: 492 AAATPGNQ 515
AA Q
Sbjct: 285 AATATEGQ 262
Score = 235 bits (508), Expect(2) = 1e-062
Identities = 100/126 (79%), Positives = 105/126 (83%)
Frame = -1 / +2
Query: 514 WFPGVAAAVSWSPKMRLRKSVTMRGRPSRRGIFGSHPRSSLARPMSGLRLCGSSWVF*RN 335
W AA+SWSP +RLRKSVTMRGRPSRR I GSHP SLA +SGLRLCGSSWVF RN
Sbjct: 263 WPSVAVAALSWSPNIRLRKSVTMRGRPSRRAILGSHPSCSLALVISGLRLCGSSWVFSRN 442
Query: 334 SIRALGSMVSWTTLASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP* 155
SIRA GSMVSWTTLASSSMVNSPGLP+LNGP SPSIS I PST+SETYWKLLVC PSP*
Sbjct: 443 SIRAFGSMVSWTTLASSSMVNSPGLPKLNGPM*SPSISLINPSTKSETYWKLLVCLPSP* 622
Query: 154 TVNGSF 137
TV SF
Sbjct: 623 TVKSSF 640
Score = 159 bits (341), Expect = 2e-038
Identities = 70/112 (62%), Positives = 81/112 (72%)
Frame = -3 / +1
Query: 476 EDALAEVGDHEGKALAEGDLWLPPKELLGTADXXXXXXXXXXXXLTELDPCVGVDGVLDN 297
E LAEVG+HEG+A+ EGDL LPPK LLG D LTELDP V VDGVLDN
Sbjct: 301 EYPLAEVGNHEGEAVTEGDLGLPPKLLLGLGDIWLALVRVVLGVLTELDPRVRVDGVLDN 480
Query: 296 XGKLQHGELAGVAQVKWSYMLAFHQLHQTLDQIRNILETPGLLSITINRQWL 141
G+ QHGEL GVAQV+W ++ FHQ HQ L+QIRN+LETPGLL+I +NRQ L
Sbjct: 481 LGQFQHGELTGVAQVEWPNVITFHQPHQPLNQIRNVLETPGLLAIALNRQKL 636
Score = 146 bits (313), Expect = 2e-034
Identities = 63/95 (66%), Positives = 69/95 (72%)
Frame = +2 / -3
Query: 137 EXAIDGLW*WKANQEFPICF*SGRGSDEADGRRACRTI*PGQPRRVHHAGACQXCPGHHR 316
E A DGL W+A+QEFPI F* G G DEADGR + I GQPR VHHAG Q CPGHHR
Sbjct: 640 EGAFDGLGRWQADQEFPIRF*FG*GVDEADGR*SHWAIQLGQPR*VHHAGTGQGCPGHHR 461
Query: 317 PQRTDRVPSEHPXRPTQAQARHRPCQGAPWVGAKD 421
P+R DRVP EHP RP QAQAR+ QGA WVGA+D
Sbjct: 460 PERADRVP*EHPGRPAQAQARYHQGQGATWVGAQD 356
Score = 129 bits (276), Expect = 2e-029
Identities = 59/99 (59%), Positives = 62/99 (62%)
Frame = +1 / -2
Query: 142 SH*RFMVMESKPGVSNMFLIWSRV**S*WKASM*DHLTWATPASSPCWSLPXLSRTPSTP 321
S *RF M S+PGVSN FLIW R ** *WK H TWATP SSPCW+ P LSRTPST
Sbjct: 635 SF*RFRAMASRPGVSNTFLIWLRG**G*WKVITLGHSTWATPVSSPCWNWPRLSRTPSTR 456
Query: 322 THGSSSVRXXXXXXXXXXXXXXVPRSSLGGSQRSPSARA 438
T GSSSVR PRS+LGGS RSPS A
Sbjct: 455 TRGSSSVRTPRTTRTSASQISPRPRSNLGGSPRSPSVTA 339
Score = 115 bits (246), Expect = 3e-025
Identities = 47/70 (67%), Positives = 49/70 (70%)
Frame = -2 / +3
Query: 345 SDGTRSVRWGRWCPGQXWQAPAW*TRRGCPG*MVLHARLPSASSDPRPDQKHIGNSWFAF 166
S GTRS R GRWCPGQ W PAW*T RGCP *M LPSASS P+P+QK IGNSW A
Sbjct: 432 SHGTRSARSGRWCPGQPWPVPAW*THRGCPS*MAQCDHLPSASSTPQPNQKRIGNSWSAC 611
Query: 165 HHHKPSMAXS 136
H KPS A S
Sbjct: 612 HRPKPSKAPS 641
Score = 28.6 bits (56), Expect(3) = 1e-072
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +2 / -3
Query: 554 FWWPASSCLVG 586
FWWPASS L+G
Sbjct: 229 FWWPASSFLLG 197
Score = 25.4 bits (49), Expect(3) = 1e-072
Identities = 7/12 (58%), Positives = 11/12 (91%)
Frame = +2 / -1
Query: 644 EIPWLML*CYSF 679
++PWL++*CY F
Sbjct: 138 KLPWLLV*CYFF 103
Score = 24.4 bits (47), Expect(2) = 1e-062
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = -2 / +3
Query: 585 PTKQLEAGHQKF 550
P ++LEAGHQ F
Sbjct: 198 PRRKLEAGHQNF 233
>gb|BU982278.1|BU982278 HA26A18r HA Hordeum vulgare subsp. vulgare cDNA clone HA26A18
5-PRIME, mRNA sequence
Length = 565
Score = 269 bits (581), Expect = 2e-071
Identities = 107/139 (76%), Positives = 121/139 (87%)
Frame = +3 / +3
Query: 66 NTYGPRMCIDDGRVVS*XVAQALXXEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHVG 245
NTYGPRMC+DDGRVVS VAQAL P+TVYGDGKQTRSFQYVSDLV GLM LME +H+G
Sbjct: 63 NTYGPRMCLDDGRVVSNFVAQALRKHPMTVYGDGKQTRSFQYVSDLVAGLMALMESDHIG 242
Query: 246 PFNLGNPGEFTMLELAXVVQDTIDPNARIEFRQNTXDDPHKRKPDIGRAKELLGWEPKIP 425
PFNLGNPGEFTMLELA VV++TIDP + IEF+ NT DDPH RKPDI +AK++LGWEPK+
Sbjct: 243 PFNLGNPGEFTMLELAEVVKETIDPMSTIEFKPNTADDPHMRKPDITKAKQMLGWEPKVS 422
Query: 426 LREGLPLMVTDFRKRIFGD 482
L+EGLPLMVTDFRKRI +
Sbjct: 423 LKEGLPLMVTDFRKRILDE 479
Score = 182 bits (393), Expect = 2e-045
Identities = 89/153 (58%), Positives = 103/153 (67%)
Frame = -1 / -1
Query: 490 VSWSPKMRLRKSVTMRGRPSRRGIFGSHPRSSLARPMSGLRLCGSSWVF*RNSIRALGSM 311
+ +S K+ LRKSVT++GRPS R FGS P A +SG + GSS V NSI +GS+
Sbjct: 487 LDYSSKILLRKSVTIKGRPSLRDTFGSQPSICFALVISGFLIWGSSAVLGLNSIVDIGSI 308
Query: 310 VSWTTLASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVNGSFXS 131
VS+TT ASS+MVNSPG PRL GP S SI I P+TRSETY KL VCFPSP TV G S
Sbjct: 307 VSFTTSASSNMVNSPGFPRLKGPI*SLSIRAINPATRSETY*KLRVCFPSPYTVIGCLRS 128
Query: 130 A*ATX*LTTRPSSMHMRGPYVLKIRAIXTQGWH 32
A AT LTTRPSS H+RGPYVL+ Q H
Sbjct: 127 ACATKLLTTRPSSRHIRGPYVLRYEQFVPQHHH 29
Score = 100 bits (212), Expect(2) = 2e-024
Identities = 41/85 (48%), Positives = 57/85 (67%)
Frame = -3 / -3
Query: 317 VDGVLDNXGKLQHGELAGVAQVKWSYMLAFHQLHQTLDQIRNILETPGLLSITINRQWLX 138
VD L N K QHGEL+ V+ ++ + M+ HQ HQ+ +QIRNIL+T L SITI W+
Sbjct: 314 VDCFLHNLCKFQHGELSRVS*IERANMITLHQSHQSSNQIRNILKTSSLFSITIYCHWMF 135
Query: 137 XQCLSNXLTDNTAIVNAHARAICVE 63
QCL N + ++T I+ AH RAIC++
Sbjct: 134 AQCLCNKIANHTTIIQAHTRAICIK 60
Score = 32.2 bits (64), Expect(2) = 2e-024
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -3 / -3
Query: 476 EDALAEVGDHEGKALAEGDLWLPPKELL 393
+D AE+ H+GKA + LWLP LL
Sbjct: 473 QDPFAEICHHQGKAFLKRYLWLPT*HLL 390
>gb|BU972745.1|BU972745 HB22J12r BC Hordeum vulgare subsp. vulgare cDNA clone HB22J12
5-PRIME, mRNA sequence
Length = 619
Score = 265 bits (574), Expect = 2e-070
Identities = 109/123 (88%), Positives = 114/123 (92%)
Frame = +3 / +3
Query: 45 VXIARIFNTYGPRMCIDDGRVVS*XVAQALXXEPLTVYGDGKQTRSFQYVSDLVEGLMKL 224
V IARIFNTYGPRMCIDDGRVVS VAQAL EPLTVYGDGKQTRSFQYVSDLVEGLM+L
Sbjct: 249 VRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMRL 428
Query: 225 MEGEHVGPFNLGNPGEFTMLELAXVVQDTIDPNARIEFRQNTXDDPHKRKPDIGRAKELL 404
MEG+H+GPFNLGNPGEFTMLELA VVQDTIDPNARIEFR+NT DDPHKRKPDI +AKE L
Sbjct: 429 MEGDHIGPFNLGNPGEFTMLELAKVVQDTIDPNARIEFRENTQDDPHKRKPDITKAKEQL 608
Query: 405 GWE 413
GWE
Sbjct: 609 GWE 617
Score = 236 bits (509), Expect(2) = 1e-063
Identities = 104/124 (83%), Positives = 107/124 (86%)
Frame = -1 / -1
Query: 415 GSHPRSSLARPMSGLRLCGSSWVF*RNSIRALGSMVSWTTLASSSMVNSPGLPRLNGPTC 236
GSHP SLA +SGLRLCGSSWVF RNSIRA GSMVSWTTLASSSMVNSPGLP+LNGP
Sbjct: 619 GSHPSCSLALVISGLRLCGSSWVFSRNSIRAFGSMVSWTTLASSSMVNSPGLPKLNGPM* 440
Query: 235 SPSISFIRPSTRSETYWKLLVCFPSP*TVNGSFXSA*ATX*LTTRPSSMHMRGPYVLKIR 56
SPSIS I PST+SETYWKLLVC PSP*TV GSF SA*AT LTTRPSSMHMRGP VLKIR
Sbjct: 439 SPSISLINPSTKSETYWKLLVCLPSP*TVKGSFLSA*ATKLLTTRPSSMHMRGP*VLKIR 260
Query: 55 AIXT 44
AI T
Sbjct: 259 AILT 248
Score = 186 bits (400), Expect = 2e-046
Identities = 79/122 (64%), Positives = 87/122 (71%)
Frame = +2 / +2
Query: 50 DRTYLQHIWPSHVH*RWPCCQLXRCSGTXEXAIDGLW*WKANQEFPICF*SGRGSDEADG 229
D + L H+WP+HVH*RWPCCQ CSG E A DGL W+A+QEFPI F* G G DEADG
Sbjct: 254 DCSDL*HLWPAHVH*RWPCCQQLCCSGAKEGAFDGLRRWQADQEFPIRF*FG*GVDEADG 433
Query: 230 RRACRTI*PGQPRRVHHAGACQXCPGHHRPQRTDRVPSEHPXRPTQAQARHRPCQGAPWV 409
R + I GQPR VHHAG Q CPGHHRP+R DRVP EHP RP QAQAR+ QGA V
Sbjct: 434 R*SHWAIQLGQPR*VHHAGTGQGCPGHHRPERADRVP*EHPGRPAQAQARYHQGQGATRV 613
Query: 410 GA 415
GA
Sbjct: 614 GA 619
Score = 163 bits (351), Expect = 9e-040
Identities = 67/100 (67%), Positives = 71/100 (71%)
Frame = -2 / -2
Query: 345 SDGTRSVRWGRWCPGQXWQAPAW*TRRGCPG*MVLHARLPSASSDPRPDQKHIGNSWFAF 166
S GTRS R GRWCPGQ W PAW*T RGCP *M LPSASS P+P+QK IGNSW A
Sbjct: 549 SHGTRSARSGRWCPGQPWPVPAW*THRGCPS*MAQCDHLPSASSTPQPNQKRIGNSWSAC 370
Query: 165 HHHKPSMAXSSVPEQRXN*QHGHRQCTCEGHMC*RYVRS* 46
H KPS A S PEQ+ *QHGHRQCTC GH C*R +S*
Sbjct: 369 HRRKPSKAPSLAPEQQSC*QHGHRQCTCAGHRC*RSEQS* 250
Score = 162 bits (349), Expect = 2e-039
Identities = 74/126 (58%), Positives = 88/126 (69%)
Frame = -3 / -3
Query: 413 LPPKELLGTADXXXXXXXXXXXXLTELDPCVGVDGVLDNXGKLQHGELAGVAQVKWSYML 234
LPP+ LLG D LTELDP V VDGVLDN G+ QHGEL GVAQV+W ++
Sbjct: 617 LPPELLLGLGDIWLALVRVVLGVLTELDPRVRVDGVLDNLGQFQHGELTGVAQVEWPNVI 438
Query: 233 AFHQLHQTLDQIRNILETPGLLSITINRQWLXXQCLSNXLTDNTAIVNAHARAICVEDTC 54
FHQ HQ L+QIRN+LETPGLL+I +NRQ L LSN + DNTAIVNAHARAI V+D
Sbjct: 437 TFHQPHQPLNQIRNVLETPGLLAIAVNRQRLLP*RLSNKVADNTAIVNAHARAIGVKDPS 258
Query: 53 DXNSRL 36
+ N ++
Sbjct: 257 NPNLKV 240
Score = 147 bits (315), Expect = 9e-035
Identities = 71/118 (60%), Positives = 74/118 (62%)
Frame = +1 / +1
Query: 61 SSTHMALACALTMAVLSVXSLLRH*XXSH*RFMVMESKPGVSNMFLIWSRV**S*WKASM 240
S T MA ACALTMAVLS LLR * S *RF M S+PGVSN FLIW R ** *WK
Sbjct: 265 SLTPMARACALTMAVLSATLLLRR*GRSL*RFTAMASRPGVSNTFLIWLRG**G*WKVIT 444
Query: 241 *DHLTWATPASSPCWSLPXLSRTPSTPTHGSSSVRXXXXXXXXXXXXXXVPRSSLGGS 414
H TWATP SSPCW+ P LSRTPST T GSSSVR PRS+ GGS
Sbjct: 445 LGHSTWATPVSSPCWNWPRLSRTPSTRTRGSSSVRTPRTTRTSASQISPRPRSNSGGS 618
Score = 27.6 bits (54), Expect(2) = 1e-063
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = -3 / -2
Query: 32 HGGNPWSRF 6
HGG+PWSRF
Sbjct: 234 HGGSPWSRF 208
>gb|BJ544684.1|BJ544684 BJ544684 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak34f15 5', mRNA sequence
Length = 540
Score = 265 bits (574), Expect = 2e-070
Identities = 109/123 (88%), Positives = 114/123 (92%)
Frame = +3 / +1
Query: 45 VXIARIFNTYGPRMCIDDGRVVS*XVAQALXXEPLTVYGDGKQTRSFQYVSDLVEGLMKL 224
V IARIFNTYGPRMCIDDGRVVS VAQAL EPLTVYGDGKQTRSFQYVSDLVEGLM+L
Sbjct: 172 VRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMRL 351
Query: 225 MEGEHVGPFNLGNPGEFTMLELAXVVQDTIDPNARIEFRQNTXDDPHKRKPDIGRAKELL 404
MEG+H+GPFNLGNPGEFTMLELA VVQDTIDPNARIEFR+NT DDPHKRKPDI +AKE L
Sbjct: 352 MEGDHIGPFNLGNPGEFTMLELAKVVQDTIDPNARIEFRENTQDDPHKRKPDITKAKEQL 531
Query: 405 GWE 413
GWE
Sbjct: 532 GWE 540
Score = 233 bits (503), Expect(2) = 8e-063
Identities = 103/123 (83%), Positives = 106/123 (86%)
Frame = -1 / -2
Query: 412 SHPRSSLARPMSGLRLCGSSWVF*RNSIRALGSMVSWTTLASSSMVNSPGLPRLNGPTCS 233
SHP SLA +SGLRLCGSSWVF RNSIRA GSMVSWTTLASSSMVNSPGLP+LNGP S
Sbjct: 539 SHPSCSLALVISGLRLCGSSWVFSRNSIRAFGSMVSWTTLASSSMVNSPGLPKLNGPM*S 360
Query: 232 PSISFIRPSTRSETYWKLLVCFPSP*TVNGSFXSA*ATX*LTTRPSSMHMRGPYVLKIRA 53
PSIS I PST+SETYWKLLVC PSP*TV GSF SA*AT LTTRPSSMHMRGP VLKIRA
Sbjct: 359 PSISLINPSTKSETYWKLLVCLPSP*TVKGSFLSA*ATKLLTTRPSSMHMRGP*VLKIRA 180
Query: 52 IXT 44
I T
Sbjct: 179 ILT 171
Score = 190 bits (410), Expect = 7e-048
Identities = 79/121 (65%), Positives = 87/121 (71%)
Frame = +2 / +3
Query: 50 DRTYLQHIWPSHVH*RWPCCQLXRCSGTXEXAIDGLW*WKANQEFPICF*SGRGSDEADG 229
D + L H+WP+HVH*RWPCCQ CSG E A DGL W+A+QEFPI F* G G DEADG
Sbjct: 177 DCSDL*HLWPTHVH*RWPCCQQLCCSGAKEGAFDGLRRWQADQEFPIRF*FG*GVDEADG 356
Query: 230 RRACRTI*PGQPRRVHHAGACQXCPGHHRPQRTDRVPSEHPXRPTQAQARHRPCQGAPWV 409
R + I GQPR VHHAG Q CPGHHRP+R DRVP EHP RP QAQAR+ QGA WV
Sbjct: 357 R*SHWAIQLGQPR*VHHAGTGQGCPGHHRPERADRVP*EHPGRPAQAQARYHQGQGATWV 536
Query: 410 G 412
G
Sbjct: 537 G 539
Score = 163 bits (350), Expect = 1e-039
Identities = 67/100 (67%), Positives = 71/100 (71%)
Frame = -2 / -3
Query: 345 SDGTRSVRWGRWCPGQXWQAPAW*TRRGCPG*MVLHARLPSASSDPRPDQKHIGNSWFAF 166
S GTRS R GRWCPGQ W PAW*T RGCP *M LPSASS P+P+QK IGNSW A
Sbjct: 472 SHGTRSARSGRWCPGQPWPVPAW*THRGCPS*MAQCDHLPSASSTPQPNQKRIGNSWSAC 293
Query: 165 HHHKPSMAXSSVPEQRXN*QHGHRQCTCEGHMC*RYVRS* 46
H KPS A S PEQ+ *QHGHRQCTC GH C*R +S*
Sbjct: 292 HRRKPSKAPSLAPEQQSC*QHGHRQCTCVGHRC*RSEQS* 173
Score = 160 bits (345), Expect = 6e-039
Identities = 74/126 (58%), Positives = 87/126 (69%)
Frame = -3 / -1
Query: 413 LPPKELLGTADXXXXXXXXXXXXLTELDPCVGVDGVLDNXGKLQHGELAGVAQVKWSYML 234
LPPK LLG D LTELDP V VDGVLDN G+ QHGEL GVAQV+W ++
Sbjct: 540 LPPKLLLGLGDIWLALVRVVLGVLTELDPRVRVDGVLDNLGQFQHGELTGVAQVEWPNVI 361
Query: 233 AFHQLHQTLDQIRNILETPGLLSITINRQWLXXQCLSNXLTDNTAIVNAHARAICVEDTC 54
FHQ HQ L+QIRN+LETPGLL+I +NRQ L LSN + DNTAIVNAHA AI V+D
Sbjct: 360 TFHQPHQPLNQIRNVLETPGLLAIAVNRQRLLP*RLSNKVADNTAIVNAHAWAIGVKDPS 181
Query: 53 DXNSRL 36
+ N ++
Sbjct: 180 NPNLKV 163
Score = 147 bits (316), Expect = 6e-035
Identities = 71/117 (60%), Positives = 74/117 (63%)
Frame = +1 / +2
Query: 61 SSTHMALACALTMAVLSVXSLLRH*XXSH*RFMVMESKPGVSNMFLIWSRV**S*WKASM 240
S T MA ACALTMAVLS LLR * S *RF M S+PGVSN FLIW R ** *WK
Sbjct: 188 SLTPMAHACALTMAVLSATLLLRR*GRSL*RFTAMASRPGVSNTFLIWLRG**G*WKVIT 367
Query: 241 *DHLTWATPASSPCWSLPXLSRTPSTPTHGSSSVRXXXXXXXXXXXXXXVPRSSLGG 411
H TWATP SSPCW+ P LSRTPST T GSSSVR PRS+LGG
Sbjct: 368 LGHSTWATPVSSPCWNWPRLSRTPSTRTRGSSSVRTPRTTRTSASQISPRPRSNLGG 538
Score = 27.6 bits (54), Expect(2) = 8e-063
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = -3 / -3
Query: 32 HGGNPWSRF 6
HGG+PWSRF
Sbjct: 157 HGGSPWSRF 131
>gb|BF256948.2|BF256948 HVSMEf0011H06f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0011H06f, mRNA sequence
Length = 538
Score = 260 bits (563), Expect(2) = 2e-070
Identities = 112/145 (77%), Positives = 119/145 (82%)
Frame = +3 / +1
Query: 81 RMCIDDGRVVS*XVAQALXXEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHVGPFNLG 260
RMCIDDGRVV VAQAL EP+TVY DG QTRSFQYVSDLVEGLMKLME +H+ PFNLG
Sbjct: 1 RMCIDDGRVVINFVAQALRKEPMTVYCDG*QTRSFQYVSDLVEGLMKLMECDHIEPFNLG 180
Query: 261 NPGEFTMLELAXVVQDTIDPNARIEFRQNTXDDPHKRKPDIGRAKELLGWEPKIPLREGL 440
PGEFTMLEL VVQDTIDPNA IEFR+NT DDPH RKPDI + E LGWEPKI LR+GL
Sbjct: 181 YPGEFTMLELDKVVQDTIDPNALIEFRENTQDDPHNRKPDITKDMEQLGWEPKIALRDGL 360
Query: 441 PLMVTDFRKRIFGDQDTAAATPGNQ 515
PLM TDFRKRIFGDQD+AA Q
Sbjct: 361 PLMDTDFRKRIFGDQDSAATDTEGQ 435
Score = 230 bits (496), Expect = 9e-060
Identities = 105/144 (72%), Positives = 115/144 (79%)
Frame = -1 / -3
Query: 514 WFPGVAAAVSWSPKMRLRKSVTMRGRPSRRGIFGSHPRSSLARPMSGLRLCGSSWVF*RN 335
W AA+SWSP +RLRKSV+MRGRPSRR I GSHP S++ +SGLRL GSSWVF RN
Sbjct: 434 WPSVSVAALSWSPNIRLRKSVSMRGRPSRRAILGSHPSCSMSLVISGLRL*GSSWVFSRN 255
Query: 334 SIRALGSMVSWTTLASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP* 155
SI A GSMVS TTL+SSSMVNSPG P+LNG S SISFI PST+SETYWKLLVC PS *
Sbjct: 254 SISAFGSMVSCTTLSSSSMVNSPG*PKLNGSM*SHSISFINPSTKSETYWKLLVC*PSQ* 75
Query: 154 TVNGSFXSA*ATX*LTTRPSSMHM 83
TV GSF SA*AT +TTRPSSMHM
Sbjct: 74 TVIGSFLSA*ATKLMTTRPSSMHM 3
Score = 166 bits (358), Expect = 1e-040
Identities = 71/113 (62%), Positives = 78/113 (69%)
Frame = +2 / +3
Query: 83 HVH*RWPCCQLXRCSGTXEXAIDGLW*WKANQEFPICF*SGRGSDEADGRRACRTI*PGQ 262
HVH*RWP C CSG E A DGL *W A+QEFPI F* G G DEADG + I G
Sbjct: 3 HVH*RWPSCHQLCCSGAKEGAYDGLL*WLADQEFPIRF*FG*GVDEADGM*SH*AIQLGL 182
Query: 263 PRRVHHAGACQXCPGHHRPQRTDRVPSEHPXRPTQAQARHRPCQGAPWVGAKD 421
PRRVHHAG Q C GHHRP+R DRVP EHP RP+Q+QAR+ GA WVGA+D
Sbjct: 183 PRRVHHAGTGQGCAGHHRPERADRVP*EHPGRPSQSQARYHQGHGATWVGAQD 341
Score = 165 bits (355), Expect = 3e-040
Identities = 78/132 (59%), Positives = 91/132 (68%)
Frame = -3 / -2
Query: 476 EDALAEVGDHEGKALAEGDLWLPPKELLGTADXXXXXXXXXXXXLTELDPCVGVDGVLDN 297
E LAEVG HEG+A+ EGDL LPPK L D LTELD V VDGVL N
Sbjct: 396 EYPLAEVGIHEGEAVTEGDLGLPPKLLHVLGDIWLAIVRVVLGVLTELDQRVRVDGVLHN 217
Query: 296 XGKLQHGELAGVAQVKWSYMLAFHQLHQTLDQIRNILETPGLLSITINRQWLXXQCLSNX 117
+ QHGEL+GVAQV+W ++ FHQLHQ L+QIRN+LETPGLL+IT+NR L LSN
Sbjct: 216 LVQFQHGELSGVAQVEWLNVITFHQLHQPLNQIRNVLETPGLLAITVNRHRLLP*RLSNK 37
Query: 116 LTDNTAIVNAHA 81
+ DN+AIVNAHA
Sbjct: 36 VDDNSAIVNAHA 1
Score = 131 bits (281), Expect = 4e-030
Identities = 56/88 (63%), Positives = 60/88 (68%)
Frame = -2 / -1
Query: 345 SDGTRSVRWGRWCPGQXWQAPAW*TRRGCPG*MVLHARLPSASSDPRPDQKHIGNSWFAF 166
S GTRS R GRWCP Q PAW*T RG P *M +PSASS P+P+QK IGNSW A
Sbjct: 265 SHGTRSARSGRWCPAQPCPVPAW*TLRGSPS*MAQCDHIPSASSTPQPNQKRIGNSWSAS 86
Query: 165 HHHKPSMAXSSVPEQRXN*QHGHRQCTC 82
HH KPS A S PEQ+ *Q GHRQCTC
Sbjct: 85 HHSKPS*APSLAPEQQS**QLGHRQCTC 2
Score = 119 bits (255), Expect(2) = 6e-028
Identities = 58/88 (65%), Positives = 60/88 (68%)
Frame = +1 / +2
Query: 82 ACALTMAVLSVXSLLRH*XXSH*RFMVMESKPGVSNMFLIWSRV**S*WKASM*DHLTWA 261
ACALTMA LS LLR * S *RF VM S+PGVSN FLIW R **S*W H TWA
Sbjct: 2 ACALTMAELSSTLLLRR*GRSL*RFTVMASRPGVSNTFLIWLRG**S*WNVITLSHSTWA 181
Query: 262 TPASSPCWSLPXLSRTPSTPTHGSSSVR 345
TP SSPCW+ L RTPST T SSSVR
Sbjct: 182 TPESSPCWNWTRLCRTPSTRTR*SSSVR 265
Score = 25.8 bits (50), Expect(2) = 2e-070
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +2 / +3
Query: 557 WWPASSCLVG 586
WWPASS L+G
Sbjct: 471 WWPASSXLLG 500
Score = 24.4 bits (47), Expect(2) = 6e-028
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +1 / +2
Query: 397 SSLGGSQRSPSARA 438
S+LGGS RSPS A
Sbjct: 317 SNLGGSPRSPSVTA 358
>gb|BM816655.1|BM816655 HB01A07_T3.ab1 HB Hordeum vulgare subsp. vulgare cDNA clone
HB01A07_T3.ab1 similar to dTDP-glucose 4,6-dehydratase,,
mRNA sequence
Length = 859
Score = 249 bits (539), Expect(2) = 2e-070
Identities = 104/120 (86%), Positives = 109/120 (90%)
Frame = +3 / +3
Query: 45 VXIARIFNTYGPRMCIDDGRVVS*XVAQALXXEPLTVYGDGKQTRSFQYVSDLVEGLMKL 224
V IARIFNTYGPRMCIDDGRVVS VAQAL EPLTVYGDGKQTRSFQYVSDLVEGLM+L
Sbjct: 297 VRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMRL 476
Query: 225 MEGEHVGPFNLGNPGEFTMLELAXVVQDTIDPNARIEFRQNTXDDPHKRKPDIGRAKELL 404
MEG+H+ PFNLGNPGEFTMLELA VVQDTIDPNARIEFR+NT DDPHKRKPDI +AK L
Sbjct: 477 MEGDHIXPFNLGNPGEFTMLELAKVVQDTIDPNARIEFRENTQDDPHKRKPDITKAKGAL 656
Score = 219 bits (473), Expect(3) = 1e-063
Identities = 98/117 (83%), Positives = 101/117 (86%)
Frame = -1 / -1
Query: 394 LARPMSGLRLCGSSWVF*RNSIRALGSMVSWTTLASSSMVNSPGLPRLNGPTCSPSISFI 215
LA +SGLRLCGSSWVF RNSIRA GSMVSWTTLASSSMVNSPGLP+LNG SPSIS I
Sbjct: 646 LALVISGLRLCGSSWVFSRNSIRAFGSMVSWTTLASSSMVNSPGLPKLNGXM*SPSISLI 467
Query: 214 RPSTRSETYWKLLVCFPSP*TVNGSFXSA*ATX*LTTRPSSMHMRGPYVLKIRAIXT 44
PST+SETYWKLLVC PSP*TV GSF SA*AT LTTRPSSMHMRGP VLKIRAI T
Sbjct: 466 NPSTKSETYWKLLVCLPSP*TVKGSFLSA*ATKLLTTRPSSMHMRGP*VLKIRAILT 296
Score = 177 bits (382), Expect(2) = 5e-046
Identities = 74/115 (64%), Positives = 82/115 (71%)
Frame = +2 / +2
Query: 50 DRTYLQHIWPSHVH*RWPCCQLXRCSGTXEXAIDGLW*WKANQEFPICF*SGRGSDEADG 229
D + L H+WP+HVH*RWPCCQ CSG E A DGL W+A+QEFPI F* G G DEADG
Sbjct: 302 DCSDL*HLWPAHVH*RWPCCQQLCCSGAKEGAFDGLRRWQADQEFPIRF*FG*GVDEADG 481
Query: 230 RRACRTI*PGQPRRVHHAGACQXCPGHHRPQRTDRVPSEHPXRPTQAQARHRPCQ 394
R + I GQPR VHHAG Q CPGHHRP+R DRVP EHP RP QAQAR+ Q
Sbjct: 482 R*SHXAIQLGQPR*VHHAGTGQGCPGHHRPERADRVP*EHPGRPAQAQARYHQGQ 646
Score = 163 bits (351), Expect(2) = 4e-044
Identities = 67/100 (67%), Positives = 71/100 (71%)
Frame = -2 / -2
Query: 345 SDGTRSVRWGRWCPGQXWQAPAW*TRRGCPG*MVLHARLPSASSDPRPDQKHIGNSWFAF 166
S GTRS R GRWCPGQ W PAW*T RGCP *M LPSASS P+P+QK IGNSW A
Sbjct: 597 SHGTRSARSGRWCPGQPWPVPAW*THRGCPS*MAQCDHLPSASSTPQPNQKRIGNSWSAC 418
Query: 165 HHHKPSMAXSSVPEQRXN*QHGHRQCTCEGHMC*RYVRS* 46
H KPS A S PEQ+ *QHGHRQCTC GH C*R +S*
Sbjct: 417 HRRKPSKAPSLAPEQQSC*QHGHRQCTCAGHRC*RSEQS* 298
Score = 155 bits (332), Expect(2) = 1e-038
Identities = 71/124 (57%), Positives = 84/124 (67%)
Frame = -3 / -3
Query: 407 PKELLGTADXXXXXXXXXXXXLTELDPCVGVDGVLDNXGKLQHGELAGVAQVKWSYMLAF 228
PK G D LTELDP V VDGVLDN G+ QHGEL GVAQV+W ++ F
Sbjct: 659 PKCSFGLGDIWLALVRVVLGVLTELDPRVRVDGVLDNLGQFQHGELTGVAQVEWXNVITF 480
Query: 227 HQLHQTLDQIRNILETPGLLSITINRQWLXXQCLSNXLTDNTAIVNAHARAICVEDTCDX 48
HQ HQ L+QIRN+LETPGLL+I +NRQ L LSN + DNTAIVNAHARAI V+D +
Sbjct: 479 HQPHQPLNQIRNVLETPGLLAIAVNRQRLLP*RLSNKVADNTAIVNAHARAIGVKDPSNP 300
Query: 47 NSRL 36
N ++
Sbjct: 299 NLKV 288
Score = 139 bits (298), Expect(2) = 3e-033
Identities = 67/116 (57%), Positives = 70/116 (60%)
Frame = +1 / +1
Query: 61 SSTHMALACALTMAVLSVXSLLRH*XXSH*RFMVMESKPGVSNMFLIWSRV**S*WKASM 240
S T MA ACALTMAVLS LLR * S *RF M S+PGVSN FLIW R ** *WK
Sbjct: 313 SLTPMARACALTMAVLSATLLLRR*GRSL*RFTAMASRPGVSNTFLIWLRG**G*WKVIT 492
Query: 241 *DHLTWATPASSPCWSLPXLSRTPSTPTHGSSSVRXXXXXXXXXXXXXXVPRSSLG 408
H TWATP SSPCW+ P LSRTPST T GSSSVR P+ G
Sbjct: 493 LXHSTWATPVSSPCWNWPRLSRTPSTRTRGSSSVRTPRTTRTSASQISPRPKEHFG 660
Score = 36.3 bits (73), Expect(2) = 2e-070
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = +3 / +2
Query: 405 GWEPKIPLREGLPLMVTDFRK 467
G P+ P R+GLPLM TDFRK
Sbjct: 659 GGSPRSPSRDGLPLMGTDFRK 721
Score = 35.0 bits (70), Expect(3) = 1e-063
Identities = 15/21 (71%), Positives = 15/21 (71%)
Frame = -1 / -2
Query: 466 LRKSVTMRGRPSRRGIFGSHP 404
LRKSV MRGRPSR G G P
Sbjct: 720 LRKSVPMRGRPSREGDLGLPP 658
Score = 34.5 bits (69), Expect(2) = 4e-044
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = -3 / -1
Query: 467 LAEVGDHEGKALAEGDLWLPPK 402
LAEVG HEGKA+ G W P +
Sbjct: 721 LAEVGTHEGKAVTGGRSWAPTR 656
Score = 27.6 bits (54), Expect(3) = 1e-063
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = -3 / -2
Query: 32 HGGNPWSRF 6
HGG+PWSRF
Sbjct: 282 HGGSPWSRF 256
Score = 26.7 bits (52), Expect(2) = 5e-046
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +3 / +1
Query: 387 RAKELLGWEPKIPL 428
R KE GWEPKI L
Sbjct: 640 RPKEHFGWEPKIAL 681
Score = 24.9 bits (48), Expect(2) = 1e-038
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -3 / -2
Query: 443 GKALAEGDLWLPPKELL 393
G+ EGDL LPP+ LL
Sbjct: 696 GRPSREGDLGLPPEVLL 646
Score = 22.6 bits (43), Expect(2) = 3e-033
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +1 / +2
Query: 394 RSSLGGSQRSPS 429
RS+ GGS RSPS
Sbjct: 647 RSTSGGSPRSPS 682
>gb|CV062330.1|CV062330 BNEL78h1 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL78h1 5' similar to UDP-glucuronic
acid decarboxylase, mRNA sequence
Length = 563
Score = 247 bits (533), Expect(3) = 4e-070
Identities = 100/117 (85%), Positives = 107/117 (91%)
Frame = +3 / +1
Query: 165 GKQTRSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAXVVQDTIDPNARIEFRQ 344
GKQTRSFQYVSDLVEGLM+LMEG+H+GPFNLGNPGEFTMLELA VVQDTIDPNARIEFR+
Sbjct: 1 GKQTRSFQYVSDLVEGLMRLMEGDHIGPFNLGNPGEFTMLELAKVVQDTIDPNARIEFRE 180
Query: 345 NTXDDPHKRKPDIGRAKELLGWEPKIPLREGLPLMVTDFRKRIFGDQDTAAATPGNQ 515
NT DDPHKRKPDI +AKE LGWEPKI LR+GLPLMVTDFRKRIFGDQD+AA Q
Sbjct: 181 NTQDDPHKRKPDITKAKEQLGWEPKIALRDGLPLMVTDFRKRIFGDQDSAATATEGQ 351
Score = 216 bits (466), Expect(3) = 1e-057
Identities = 91/115 (79%), Positives = 96/115 (83%)
Frame = -1 / -1
Query: 514 WFPGVAAAVSWSPKMRLRKSVTMRGRPSRRGIFGSHPRSSLARPMSGLRLCGSSWVF*RN 335
W AA+SWSP +RLRKSVTMRGRPSRR I GSHP S A +SGLRLCGSSWVF RN
Sbjct: 350 WPSVAVAALSWSPNIRLRKSVTMRGRPSRRAILGSHPSCSFALVISGLRLCGSSWVFSRN 171
Query: 334 SIRALGSMVSWTTLASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVC 170
SIRA GSMVSWTTLASSSMVNSPGLP+LNGP SPSIS I PST+SETYWKLLVC
Sbjct: 170 SIRAFGSMVSWTTLASSSMVNSPGLPKLNGPM*SPSISLINPSTKSETYWKLLVC 6
Score = 142 bits (305), Expect = 2e-033
Identities = 63/104 (60%), Positives = 74/104 (71%)
Frame = -3 / -3
Query: 476 EDALAEVGDHEGKALAEGDLWLPPKELLGTADXXXXXXXXXXXXLTELDPCVGVDGVLDN 297
E LAEVG+HEG+A+ EGDL LPP+ LL D LTELDP V VDGVLDN
Sbjct: 312 EYPLAEVGNHEGEAVTEGDLGLPPELLLCLGDIWLALVRVVLGVLTELDPRVRVDGVLDN 133
Query: 296 XGKLQHGELAGVAQVKWSYMLAFHQLHQTLDQIRNILETPGLLS 165
G+ QHGEL GVAQV+W ++ FHQ HQ L+QIRN+LETPGLL+
Sbjct: 132 LGQFQHGELTGVAQVEWPNVITFHQPHQPLNQIRNVLETPGLLA 1
Score = 124 bits (266), Expect(2) = 4e-028
Identities = 55/85 (64%), Positives = 62/85 (72%)
Frame = +2 / +3
Query: 167 KANQEFPICF*SGRGSDEADGRRACRTI*PGQPRRVHHAGACQXCPGHHRPQRTDRVPSE 346
+A+QEFPI F* G G DEADGR + I GQPR VHHAG Q CPGHHRP+R DRVP E
Sbjct: 3 QADQEFPIRF*FG*GVDEADGR*SHWAIQLGQPR*VHHAGTGQGCPGHHRPERADRVP*E 182
Query: 347 HPXRPTQAQARHRPCQGAPWVGAKD 421
HP RP QAQAR+ +GA VGA+D
Sbjct: 183 HPGRPAQAQARYHQGKGATRVGAQD 257
Score = 114 bits (244), Expect = 5e-025
Identities = 52/90 (57%), Positives = 55/90 (61%)
Frame = +1 / +2
Query: 169 SKPGVSNMFLIWSRV**S*WKASM*DHLTWATPASSPCWSLPXLSRTPSTPTHGSSSVRX 348
S+PGVSN FLIW R ** *WK H TWATP SSPCW+ P LSRTPST T GSSSVR
Sbjct: 5 SRPGVSNTFLIWLRG**G*WKVITLGHSTWATPVSSPCWNWPRLSRTPSTRTRGSSSVRT 184
Query: 349 XXXXXXXXXXXXXVPRSSLGGSQRSPSARA 438
RS+ GGS RSPS A
Sbjct: 185 PRTTRTSASQISPRQRSNSGGSPRSPSVTA 274
Score = 104 bits (221), Expect = 8e-022
Identities = 41/59 (69%), Positives = 43/59 (72%)
Frame = -2 / -2
Query: 345 SDGTRSVRWGRWCPGQXWQAPAW*TRRGCPG*MVLHARLPSASSDPRPDQKHIGNSWFA 169
S GTRS R GRWCPGQ W PAW*T RGCP *M LPSASS P+P+QK IGNSW A
Sbjct: 181 SHGTRSARSGRWCPGQPWPVPAW*THRGCPS*MAQCDHLPSASSTPQPNQKRIGNSWSA 5
Score = 29.0 bits (57), Expect(3) = 4e-070
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +2 / +3
Query: 554 FWWPASSCLVG 586
FWWPASS L+G
Sbjct: 384 FWWPASSLLLG 416
Score = 28.1 bits (55), Expect(3) = 4e-070
Identities = 8/12 (66%), Positives = 12/12 (100%)
Frame = +2 / +1
Query: 644 EIPWLML*CYSF 679
++PWL++*CYSF
Sbjct: 475 KLPWLLV*CYSF 510
Score = 23.5 bits (45), Expect(3) = 1e-057
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -2 / -2
Query: 585 PTKQLEAGHQKF 550
P +LEAGHQ F
Sbjct: 415 PRSKLEAGHQNF 380
Score = 22.1 bits (42), Expect(3) = 1e-057
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = -2 / -1
Query: 681 EKE*HYSINQG 649
+KE*HY+ NQG
Sbjct: 512 KKE*HYTNNQG 480
Score = 21.7 bits (41), Expect(2) = 4e-028
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +1 / +2
Query: 499 PPPETSKARTEEEHGTWKFLVACF*L 576
PPP ++ ++ LVACF*L
Sbjct: 329 PPPPPKASKE*TGVQYYEILVACF*L 406
>gb|BU996667.1|BU996667 HM14F14r HM Hordeum vulgare subsp. vulgare cDNA clone HM14F14
5-PRIME, mRNA sequence
Length = 604
Score = 263 bits (569), Expect = 8e-070
Identities = 108/122 (88%), Positives = 113/122 (92%)
Frame = +3 / +1
Query: 45 VXIARIFNTYGPRMCIDDGRVVS*XVAQALXXEPLTVYGDGKQTRSFQYVSDLVEGLMKL 224
V IARIFNTYGPRMCIDDGRVVS VAQAL EPLTVYGDGKQTRSFQYVSDLVEGLM+L
Sbjct: 238 VRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMRL 417
Query: 225 MEGEHVGPFNLGNPGEFTMLELAXVVQDTIDPNARIEFRQNTXDDPHKRKPDIGRAKELL 404
MEG+H+GPFNLGNPGEFTMLELA VVQDTIDPNARIEFR+NT DDPHKRKPDI +AKE L
Sbjct: 418 MEGDHIGPFNLGNPGEFTMLELAKVVQDTIDPNARIEFRENTQDDPHKRKPDITKAKEQL 597
Query: 405 GW 410
GW
Sbjct: 598 GW 603
Score = 231 bits (499), Expect(2) = 3e-062
Identities = 102/122 (83%), Positives = 105/122 (86%)
Frame = -1 / -3
Query: 409 HPRSSLARPMSGLRLCGSSWVF*RNSIRALGSMVSWTTLASSSMVNSPGLPRLNGPTCSP 230
HP SLA +SGLRLCGSSWVF RNSIRA GSMVSWTTLASSSMVNSPGLP+LNGP SP
Sbjct: 602 HPSCSLALVISGLRLCGSSWVFSRNSIRAFGSMVSWTTLASSSMVNSPGLPKLNGPM*SP 423
Query: 229 SISFIRPSTRSETYWKLLVCFPSP*TVNGSFXSA*ATX*LTTRPSSMHMRGPYVLKIRAI 50
SIS I PST+SETYWKLLVC PSP*TV GSF SA*AT LTTRPSSMHMRGP VLKIRAI
Sbjct: 422 SISLINPSTKSETYWKLLVCLPSP*TVKGSFLSA*ATKLLTTRPSSMHMRGP*VLKIRAI 243
Query: 49 XT 44
T
Sbjct: 242 LT 237
Score = 181 bits (390), Expect = 4e-045
Identities = 76/117 (64%), Positives = 84/117 (71%)
Frame = +2 / +3
Query: 50 DRTYLQHIWPSHVH*RWPCCQLXRCSGTXEXAIDGLW*WKANQEFPICF*SGRGSDEADG 229
D + L H+WP+HVH*RWPCCQ CSG E A DGL W+A+QEFPI F* G G DEADG
Sbjct: 243 DCSDL*HLWPAHVH*RWPCCQQLCCSGAKEGAFDGLRRWQADQEFPIRF*FG*GVDEADG 422
Query: 230 RRACRTI*PGQPRRVHHAGACQXCPGHHRPQRTDRVPSEHPXRPTQAQARHRPCQGA 400
R + I GQPR VHHAG Q CPGHHRP+R DRVP EHP RP QAQAR+ QGA
Sbjct: 423 R*SHWAIQLGQPR*VHHAGTGQGCPGHHRPERADRVP*EHPGRPAQAQARYHQGQGA 593
Score = 163 bits (351), Expect = 9e-040
Identities = 67/100 (67%), Positives = 71/100 (71%)
Frame = -2 / -1
Query: 345 SDGTRSVRWGRWCPGQXWQAPAW*TRRGCPG*MVLHARLPSASSDPRPDQKHIGNSWFAF 166
S GTRS R GRWCPGQ W PAW*T RGCP *M LPSASS P+P+QK IGNSW A
Sbjct: 538 SHGTRSARSGRWCPGQPWPVPAW*THRGCPS*MAQCDHLPSASSTPQPNQKRIGNSWSAC 359
Query: 165 HHHKPSMAXSSVPEQRXN*QHGHRQCTCEGHMC*RYVRS* 46
H KPS A S PEQ+ *QHGHRQCTC GH C*R +S*
Sbjct: 358 HRRKPSKAPSLAPEQQSC*QHGHRQCTCAGHRC*RSEQS* 239
Score = 160 bits (345), Expect = 6e-039
Identities = 73/125 (58%), Positives = 87/125 (69%)
Frame = -3 / -2
Query: 410 PPKELLGTADXXXXXXXXXXXXLTELDPCVGVDGVLDNXGKLQHGELAGVAQVKWSYMLA 231
PP+ LLG D LTELDP V VDGVLDN G+ QHGEL GVAQV+W ++
Sbjct: 603 PPELLLGLGDIWLALVRVVLGVLTELDPRVRVDGVLDNLGQFQHGELTGVAQVEWPNVIT 424
Query: 230 FHQLHQTLDQIRNILETPGLLSITINRQWLXXQCLSNXLTDNTAIVNAHARAICVEDTCD 51
FHQ HQ L+QIRN+LETPGLL+I +NRQ L LSN + DNTAIVNAHARAI V+D +
Sbjct: 423 FHQPHQPLNQIRNVLETPGLLAIAVNRQRLLP*RLSNKVADNTAIVNAHARAIGVKDPSN 244
Query: 50 XNSRL 36
N ++
Sbjct: 243 PNLKV 229
Score = 145 bits (311), Expect = 3e-034
Identities = 70/117 (59%), Positives = 73/117 (62%)
Frame = +1 / +2
Query: 61 SSTHMALACALTMAVLSVXSLLRH*XXSH*RFMVMESKPGVSNMFLIWSRV**S*WKASM 240
S T MA ACALTMAVLS LLR * S *RF M S+PGVSN FLIW R ** *WK
Sbjct: 254 SLTPMARACALTMAVLSATLLLRR*GRSL*RFTAMASRPGVSNTFLIWLRG**G*WKVIT 433
Query: 241 *DHLTWATPASSPCWSLPXLSRTPSTPTHGSSSVRXXXXXXXXXXXXXXVPRSSLGG 411
H TWATP SSPCW+ P LSRTPST T GSSSVR PRS+ GG
Sbjct: 434 LGHSTWATPVSSPCWNWPRLSRTPSTRTRGSSSVRTPRTTRTSASQISPRPRSNSGG 604
Score = 27.6 bits (54), Expect(2) = 3e-062
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = -3 / -1
Query: 32 HGGNPWSRF 6
HGG+PWSRF
Sbjct: 223 HGGSPWSRF 197
>gb|BG301258.2|BG301258 HVSMEb0020E14f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0020E14f, mRNA sequence
Length = 900
Score = 198 bits (427), Expect(2) = 3e-069
Identities = 85/94 (90%), Positives = 85/94 (90%)
Frame = +3 / +3
Query: 45 VXIARIFNTYGPRMCIDDGRVVS*XVAQALXXEPLTVYGDGKQTRSFQYVSDLVEGLMKL 224
V IARIFNTYGPRMCIDDGRVVS VAQAL EPLTVYGD KQT SFQYVSDLVEGLMKL
Sbjct: 366 VRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDRKQTMSFQYVSDLVEGLMKL 545
Query: 225 MEGEHVGPFNLGNPGEFTMLELAXVVQDTIDPNA 326
MEGEHVGPF LGNPGEFTMLELA VVQDTIDPNA
Sbjct: 546 MEGEHVGPFKLGNPGEFTMLELAKVVQDTIDPNA 647
Score = 175 bits (376), Expect(2) = 3e-056
Identities = 78/94 (82%), Positives = 80/94 (85%)
Frame = -1 / -3
Query: 325 ALGSMVSWTTLASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVN 146
ALGSMVS TTLASSS+VNSPG P LNGPTCSPSISFI PSTRSETYWKL+VC SP TV
Sbjct: 646 ALGSMVSCTTLASSSIVNSPGFPSLNGPTCSPSISFISPSTRSETYWKLIVCLRSPYTVR 467
Query: 145 GSFXSA*ATX*LTTRPSSMHMRGPYVLKIRAIXT 44
GSF SA AT LTTRPSSMHMRGP VLKIRAI T
Sbjct: 466 GSFLSAWATKLLTTRPSSMHMRGP*VLKIRAILT 365
Score = 111 bits (238), Expect(2) = 4e-028
Identities = 48/92 (52%), Positives = 65/92 (70%)
Frame = -3 / -2
Query: 326 CVGVDGVLDNXGKLQHGELAGVAQVKWSYMLAFHQLHQTLDQIRNILETPGLLSITINRQ 147
CVGVDGVL + G+LQH EL GV Q + ++L HQLHQ L+QI ++LE LL++ ++RQ
Sbjct: 647 CVGVDGVLHHFGQLQHRELPGVPQFERPHVLPLHQLHQPLNQIGDVLEAHRLLAVAVHRQ 468
Query: 146 WLXXQCLSNXLTDNTAIVNAHARAICVEDTCD 51
L QCL + + D+ AIV+AHAR + VED D
Sbjct: 467 GLLPQCLGDKVADDPAIVDAHARPVGVEDPRD 372
Score = 106 bits (227), Expect = 1e-022
Identities = 48/93 (51%), Positives = 57/93 (61%)
Frame = -2 / -1
Query: 327 VRWGRWCPGQXWQAPAW*TRRGCPG*MVLHARLPSASSDPRPDQKHIGNSWFAFHHHKPS 148
+RWGRWCP W APA *T RG P * A PSASS P+PD++ G+S A PS
Sbjct: 648 LRWGRWCPAPLWPAPAS*TPRGSPV*TAPRAPPPSASSAPQPDRRRTGSSSSACGRRTPS 469
Query: 147 MAXSSVPEQRXN*QHGHRQCTCEGHMC*RYVRS 49
A SSVP ++ *+ GHR+CTC C*R RS
Sbjct: 468 GAPSSVPGRQSC*RPGHRRCTCAARRC*RSARS 370
Score = 95.0 bits (201), Expect(2) = 2e-024
Identities = 46/92 (50%), Positives = 55/92 (59%)
Frame = +2 / +2
Query: 50 DRTYLQHIWPSHVH*RWPCCQLXRCSGTXEXAIDGLW*WKANQEFPICF*SGRGSDEADG 229
DR LQH+ +HVH RWP Q GT E A DG+ +A+ E P+ SG G+DEADG
Sbjct: 371 DRADLQHLRAAHVHRRWPGRQQLCRPGTEEGAPDGVRRPQADDELPVRLRSG*GADEADG 550
Query: 230 RRACRTI*PGQPRRVHHAGACQXCPGHHRPQR 325
A + G+PR VH AGA Q GHHRPQR
Sbjct: 551 GGARGAVQTGEPRGVHDAGAGQSGAGHHRPQR 646
Score = 84.0 bits (177), Expect(2) = 3e-069
Identities = 35/55 (63%), Positives = 39/55 (70%)
Frame = +3 / +2
Query: 318 PNARIEFRQNTXDDPHKRKPDIGRAKELLGWEPKIPLREGLPLMVTDFRKRIFGD 482
P RIEFR NT DDP KRKPD+ +AKELLG EPK PLR GLPL+ + R GD
Sbjct: 638 PQRRIEFRANTVDDPDKRKPDLTKAKELLGLEPKGPLRNGLPLIGQELPTRFLGD 802
Score = 63.8 bits (133), Expect(2) = 3e-056
Identities = 33/55 (60%), Positives = 35/55 (63%)
Frame = -1 / -1
Query: 481 SPKMRLRKSVTMRGRPSRRGIFGSHPRSSLARPMSGLRLCGSSWVF*RNSIRALG 317
SPK R+ S MRGRP R G GS+P SSLA SGLRL GSS V RNSI G
Sbjct: 801 SPKNRVGSSWPMRGRPFRSGPLGSNPSSSLALVRSGLRLSGSSTVLARNSILRWG 637
Score = 37.3 bits (75), Expect(2) = 2e-024
Identities = 17/30 (56%), Positives = 19/30 (63%)
Frame = +2 / +1
Query: 329 DRVPSEHPXRPTQAQARHRPCQGAPWVGAK 418
DRVP +H RP QAQA QGA VGA+
Sbjct: 649 DRVPGQHRRRPGQAQAGPHQGQGAARVGAQ 738
Score = 32.7 bits (65), Expect(2) = 4e-028
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = -3 / -3
Query: 449 HEGKALAEGDLWLPPKELLGTADXXXXXXXXXXXXLTELDPCVG 318
+EGK + E L L P++LLG + ELDP +G
Sbjct: 769 NEGKTVPERPLGLQPEQLLGLGEVRLALVRVVDGVGPELDPALG 638
>gb|BJ546155.1|BJ546155 BJ546155 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak34f15 3', mRNA sequence
Length = 555
Score = 244 bits (527), Expect(3) = 4e-069
Identities = 99/116 (85%), Positives = 106/116 (91%)
Frame = +3 / -3
Query: 168 KQTRSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAXVVQDTIDPNARIEFRQN 347
KQTRSFQYVSDLVEGLM+LMEG+H+GPFNLGNPGEFTMLELA VVQDTIDPNARIEFR+N
Sbjct: 553 KQTRSFQYVSDLVEGLMRLMEGDHIGPFNLGNPGEFTMLELAKVVQDTIDPNARIEFREN 374
Query: 348 TXDDPHKRKPDIGRAKELLGWEPKIPLREGLPLMVTDFRKRIFGDQDTAAATPGNQ 515
T DDPHKRKPDI +AKE LGWEPKI LR+GLPLMVTDFRKRIFGDQD+AA Q
Sbjct: 373 TQDDPHKRKPDITKAKEQLGWEPKIALRDGLPLMVTDFRKRIFGDQDSAATATEGQ 206
Score = 218 bits (470), Expect(3) = 2e-058
Identities = 92/115 (80%), Positives = 97/115 (84%)
Frame = -1 / +3
Query: 514 WFPGVAAAVSWSPKMRLRKSVTMRGRPSRRGIFGSHPRSSLARPMSGLRLCGSSWVF*RN 335
W AA+SWSP +RLRKSVTMRGRPSRR I GSHP SLA +SGLRLCGSSWVF RN
Sbjct: 207 WPSVAVAALSWSPNIRLRKSVTMRGRPSRRAILGSHPSCSLALVISGLRLCGSSWVFSRN 386
Query: 334 SIRALGSMVSWTTLASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVC 170
SIRA GSMVSWTTLASSSMVNSPGLP+LNGP SPSIS I PST+SETYWKLLVC
Sbjct: 387 SIRAFGSMVSWTTLASSSMVNSPGLPKLNGPM*SPSISLINPSTKSETYWKLLVC 551
Score = 148 bits (317), Expect = 5e-035
Identities = 65/103 (63%), Positives = 74/103 (71%)
Frame = -3 / +2
Query: 476 EDALAEVGDHEGKALAEGDLWLPPKELLGTADXXXXXXXXXXXXLTELDPCVGVDGVLDN 297
E LAEVG+HEG+A+ EGDL LPPK LLG D LTELDP V VDGVLDN
Sbjct: 245 EYPLAEVGNHEGEAVTEGDLGLPPKLLLGLGDIWLALVRVVLGVLTELDPRVRVDGVLDN 424
Query: 296 XGKLQHGELAGVAQVKWSYMLAFHQLHQTLDQIRNILETPGLL 168
G+ QHGEL GVAQV+W ++ FHQ HQ L+QIRN+LETPGLL
Sbjct: 425 LGQFQHGELTGVAQVEWPNVITFHQPHQPLNQIRNVLETPGLL 553
Score = 133 bits (284), Expect(2) = 2e-030
Identities = 57/85 (67%), Positives = 63/85 (74%)
Frame = +2 / -2
Query: 167 KANQEFPICF*SGRGSDEADGRRACRTI*PGQPRRVHHAGACQXCPGHHRPQRTDRVPSE 346
+A+QEFPI F* G G DEADGR + I GQPR VHHAG Q CPGHHRP+R DRVP E
Sbjct: 554 QADQEFPIRF*FG*GVDEADGR*SHWAIQLGQPR*VHHAGTGQGCPGHHRPERADRVP*E 375
Query: 347 HPXRPTQAQARHRPCQGAPWVGAKD 421
HP RP QAQAR+ QGA WVGA+D
Sbjct: 374 HPGRPAQAQARYHQGQGATWVGAQD 300
Score = 121 bits (258), Expect = 6e-027
Identities = 54/90 (60%), Positives = 57/90 (63%)
Frame = +1 / -1
Query: 169 SKPGVSNMFLIWSRV**S*WKASM*DHLTWATPASSPCWSLPXLSRTPSTPTHGSSSVRX 348
S+PGVSN FLIW R ** *WK H TWATP SSPCW+ P LSRTPST T GSSSVR
Sbjct: 552 SRPGVSNTFLIWLRG**G*WKVITLGHSTWATPVSSPCWNWPRLSRTPSTRTRGSSSVRT 373
Query: 349 XXXXXXXXXXXXXVPRSSLGGSQRSPSARA 438
PRS+LGGS RSPS A
Sbjct: 372 PRTTRTSASQISPRPRSNLGGSPRSPSVTA 283
Score = 104 bits (221), Expect = 8e-022
Identities = 41/59 (69%), Positives = 43/59 (72%)
Frame = -2 / +1
Query: 345 SDGTRSVRWGRWCPGQXWQAPAW*TRRGCPG*MVLHARLPSASSDPRPDQKHIGNSWFA 169
S GTRS R GRWCPGQ W PAW*T RGCP *M LPSASS P+P+QK IGNSW A
Sbjct: 376 SHGTRSARSGRWCPGQPWPVPAW*THRGCPS*MAQCDHLPSASSTPQPNQKRIGNSWSA 552
Score = 28.6 bits (56), Expect(3) = 4e-069
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +2 / -2
Query: 554 FWWPASSCLVG 586
FWWPASS L+G
Sbjct: 173 FWWPASSFLLG 141
Score = 28.1 bits (55), Expect(3) = 4e-069
Identities = 8/12 (66%), Positives = 12/12 (100%)
Frame = +2 / -3
Query: 644 EIPWLML*CYSF 679
++PWL++*CYSF
Sbjct: 82 KLPWLLV*CYSF 47
Score = 24.4 bits (47), Expect(3) = 2e-058
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = -2 / +1
Query: 585 PTKQLEAGHQKF 550
P ++LEAGHQ F
Sbjct: 142 PRRKLEAGHQNF 177
Score = 22.1 bits (42), Expect(3) = 2e-058
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = -2 / +3
Query: 681 EKE*HYSINQG 649
+KE*HY+ NQG
Sbjct: 45 KKE*HYTNNQG 77
Score = 21.7 bits (41), Expect(2) = 2e-030
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +1 / -1
Query: 499 PPPETSKARTEEEHGTWKFLVACF*L 576
PPP ++ ++ LVACF*L
Sbjct: 228 PPPPPKASKE*TGVQYYEILVACF*L 151
>gb|AL510717.1|AL510717 AL510717 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY05M18u 3',
mRNA sequence
Length = 580
Score = 221 bits (477), Expect(4) = 1e-068
Identities = 89/106 (83%), Positives = 96/106 (90%)
Frame = +3 / -1
Query: 198 DLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAXVVQDTIDPNARIEFRQNTXDDPHKRKP 377
DLVEGLM+LMEG+H+GPFNLGNPGEFTMLELA VVQDTIDPNARIEFR+NT DDPHKRKP
Sbjct: 511 DLVEGLMRLMEGDHIGPFNLGNPGEFTMLELAKVVQDTIDPNARIEFRENTQDDPHKRKP 332
Query: 378 DIGRAKELLGWEPKIPLREGLPLMVTDFRKRIFGDQDTAAATPGNQ 515
DI +AKE LGWEPKI LR+GLPLMVTDFRKRIFGDQD+AA Q
Sbjct: 331 DITKAKEQLGWEPKIALRDGLPLMVTDFRKRIFGDQDSAATATEGQ 194
Score = 193 bits (416), Expect(4) = 1e-057
Identities = 83/106 (78%), Positives = 88/106 (83%)
Frame = -1 / +3
Query: 514 WFPGVAAAVSWSPKMRLRKSVTMRGRPSRRGIFGSHPRSSLARPMSGLRLCGSSWVF*RN 335
W AA+SWSP +RLRKSVTMRGRPSRR I GSHP SLA +SGLRLCGSSWVF RN
Sbjct: 195 WPSVAVAALSWSPNIRLRKSVTMRGRPSRRAILGSHPSCSLALVISGLRLCGSSWVFSRN 374
Query: 334 SIRALGSMVSWTTLASSSMVNSPGLPRLNGPTCSPSISFIRPSTRS 197
SIRA GSMVSWTTLASSSMVNSPGLP+LNGP SPSIS I PST+S
Sbjct: 375 SIRAFGSMVSWTTLASSSMVNSPGLPKLNGPM*SPSISLINPSTKS 512
Score = 124 bits (266), Expect(2) = 1e-031
Identities = 55/94 (58%), Positives = 65/94 (69%)
Frame = -3 / +2
Query: 476 EDALAEVGDHEGKALAEGDLWLPPKELLGTADXXXXXXXXXXXXLTELDPCVGVDGVLDN 297
E LAEVG+HEG+A+ EGDL LPP+ LLG D LTELDP V VDGVLDN
Sbjct: 233 EYPLAEVGNHEGEAVTEGDLGLPPELLLGLGDIWLALVRVVLGVLTELDPRVRVDGVLDN 412
Query: 296 XGKLQHGELAGVAQVKWSYMLAFHQLHQTLDQIR 195
G+ QHGEL GVAQV+W ++ FHQ HQ L+QI+
Sbjct: 413 LGQFQHGELTGVAQVEWPNVITFHQPHQPLNQIK 514
Score = 112 bits (240), Expect(2) = 2e-024
Identities = 51/85 (60%), Positives = 56/85 (65%)
Frame = +2 / -3
Query: 167 KANQEFPICF*SGRGSDEADGRRACRTI*PGQPRRVHHAGACQXCPGHHRPQRTDRVPSE 346
K + F * G G DEADGR + I GQPR VHHAG Q CPGHHRP+R DRVP E
Sbjct: 542 KQTRSFQYVS*FG*GVDEADGR*SHWAIQLGQPR*VHHAGTGQGCPGHHRPERADRVP*E 363
Query: 347 HPXRPTQAQARHRPCQGAPWVGAKD 421
HP RP QAQAR+ QGA VGA+D
Sbjct: 362 HPGRPAQAQARYHQGQGATRVGAQD 288
Score = 103 bits (220), Expect(2) = 1e-023
Identities = 47/82 (57%), Positives = 49/82 (59%)
Frame = +1 / -2
Query: 193 FLIWSRV**S*WKASM*DHLTWATPASSPCWSLPXLSRTPSTPTHGSSSVRXXXXXXXXX 372
FLIW R ** *WK H TWATP SSPCW+ P LSRTPST T GSSSVR
Sbjct: 516 FLIWLRG**G*WKVITLGHSTWATPVSSPCWNWPRLSRTPSTRTRGSSSVRTPRTTRTSA 337
Query: 373 XXXXXVPRSSLGGSQRSPSARA 438
PRS+ GGS RSPS A
Sbjct: 336 SQISPRPRSNSGGSPRSPSVTA 271
Score = 41.4 bits (84), Expect(4) = 1e-057
Identities = 15/20 (75%), Positives = 15/20 (75%)
Frame = -1 / +1
Query: 211 PSTRSETYWKLLVCFPSP*T 152
P ETYWKLLVC PSP*T
Sbjct: 499 PQPNQETYWKLLVCLPSP*T 558
Score = 39.1 bits (79), Expect(4) = 1e-068
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3 / -3
Query: 153 VYGDGKQTRSFQYVS 197
VYGDGKQTRSFQYVS
Sbjct: 557 VYGDGKQTRSFQYVS 513
Score = 31.8 bits (63), Expect(2) = 1e-031
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = -3 / +3
Query: 197 RNILETPGLLSITIN 153
RN+LETPGLL+I +N
Sbjct: 513 RNVLETPGLLAIAVN 557
Score = 29.0 bits (57), Expect(4) = 1e-068
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +2 / -3
Query: 554 FWWPASSCLVG 586
FWWPASS L+G
Sbjct: 161 FWWPASSLLLG 129
Score = 28.1 bits (55), Expect(4) = 1e-068
Identities = 8/12 (66%), Positives = 12/12 (100%)
Frame = +2 / -1
Query: 644 EIPWLML*CYSF 679
++PWL++*CYSF
Sbjct: 70 KLPWLLV*CYSF 35
Score = 26.3 bits (51), Expect(2) = 1e-023
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +2 / -2
Query: 146 IDGLW*WKANQEFPICF 196
+ GL W+A+QEFPI F
Sbjct: 564 LTGLRRWQADQEFPIRF 514
Score = 23.5 bits (45), Expect(4) = 1e-057
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -2 / +1
Query: 585 PTKQLEAGHQKF 550
P +LEAGHQ F
Sbjct: 130 PRSKLEAGHQNF 165
Score = 22.1 bits (42), Expect(4) = 1e-057
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = -2 / +3
Query: 681 EKE*HYSINQG 649
+KE*HY+ NQG
Sbjct: 33 KKE*HYTNNQG 65
Score = 21.7 bits (41), Expect(2) = 2e-024
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +1 / -2
Query: 499 PPPETSKARTEEEHGTWKFLVACF*L 576
PPP ++ ++ LVACF*L
Sbjct: 216 PPPPPKASKE*TGVQYYEILVACF*L 139
>gb|AV911559.1|AV911559 AV911559 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak13i23 3', mRNA sequence
Length = 551
Score = 242 bits (522), Expect(3) = 2e-068
Identities = 98/115 (85%), Positives = 105/115 (91%)
Frame = +3 / -2
Query: 171 QTRSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAXVVQDTIDPNARIEFRQNT 350
QTRSFQYVSDLVEGLM+LMEG+H+GPFNLGNPGEFTMLELA VVQDTIDPNARIEFR+NT
Sbjct: 550 QTRSFQYVSDLVEGLMRLMEGDHIGPFNLGNPGEFTMLELAKVVQDTIDPNARIEFRENT 371
Query: 351 XDDPHKRKPDIGRAKELLGWEPKIPLREGLPLMVTDFRKRIFGDQDTAAATPGNQ 515
DDPHKRKPDI +AKE LGWEPKI LR+GLPLMVTDFRKRIFGDQD+AA Q
Sbjct: 370 QDDPHKRKPDITKAKEQLGWEPKIALRDGLPLMVTDFRKRIFGDQDSAATATEGQ 206
Score = 218 bits (470), Expect(3) = 2e-058
Identities = 92/115 (80%), Positives = 97/115 (84%)
Frame = -1 / +3
Query: 514 WFPGVAAAVSWSPKMRLRKSVTMRGRPSRRGIFGSHPRSSLARPMSGLRLCGSSWVF*RN 335
W AA+SWSP +RLRKSVTMRGRPSRR I GSHP SLA +SGLRLCGSSWVF RN
Sbjct: 207 WPSVAVAALSWSPNIRLRKSVTMRGRPSRRAILGSHPSCSLALVISGLRLCGSSWVFSRN 386
Query: 334 SIRALGSMVSWTTLASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVC 170
SIRA GSMVSWTTLASSSMVNSPGLP+LNGP SPSIS I PST+SETYWKLLVC
Sbjct: 387 SIRAFGSMVSWTTLASSSMVNSPGLPKLNGPM*SPSISLINPSTKSETYWKLLVC 551
Score = 146 bits (313), Expect = 2e-034
Identities = 64/102 (62%), Positives = 73/102 (71%)
Frame = -3 / +2
Query: 476 EDALAEVGDHEGKALAEGDLWLPPKELLGTADXXXXXXXXXXXXLTELDPCVGVDGVLDN 297
E LAEVG+HEG+A+ EGDL LPPK LLG D LTELDP V VDGVLDN
Sbjct: 245 EYPLAEVGNHEGEAVTEGDLGLPPKLLLGLGDIWLALVRVVLGVLTELDPRVRVDGVLDN 424
Query: 296 XGKLQHGELAGVAQVKWSYMLAFHQLHQTLDQIRNILETPGL 171
G+ QHGEL GVAQV+W ++ FHQ HQ L+QIRN+LETPGL
Sbjct: 425 LGQFQHGELTGVAQVEWPNVITFHQPHQPLNQIRNVLETPGL 550
Score = 132 bits (283), Expect(2) = 2e-030
Identities = 57/84 (67%), Positives = 62/84 (73%)
Frame = +2 / -1
Query: 170 ANQEFPICF*SGRGSDEADGRRACRTI*PGQPRRVHHAGACQXCPGHHRPQRTDRVPSEH 349
A+QEFPI F* G G DEADGR + I GQPR VHHAG Q CPGHHRP+R DRVP EH
Sbjct: 551 ADQEFPIRF*FG*GVDEADGR*SHWAIQLGQPR*VHHAGTGQGCPGHHRPERADRVP*EH 372
Query: 350 PXRPTQAQARHRPCQGAPWVGAKD 421
P RP QAQAR+ QGA WVGA+D
Sbjct: 371 PGRPAQAQARYHQGQGATWVGAQD 300
Score = 119 bits (254), Expect = 2e-026
Identities = 53/89 (59%), Positives = 56/89 (62%)
Frame = +1 / -3
Query: 172 KPGVSNMFLIWSRV**S*WKASM*DHLTWATPASSPCWSLPXLSRTPSTPTHGSSSVRXX 351
+PGVSN FLIW R ** *WK H TWATP SSPCW+ P LSRTPST T GSSSVR
Sbjct: 549 RPGVSNTFLIWLRG**G*WKVITLGHSTWATPVSSPCWNWPRLSRTPSTRTRGSSSVRTP 370
Query: 352 XXXXXXXXXXXXVPRSSLGGSQRSPSARA 438
PRS+LGGS RSPS A
Sbjct: 369 RTTRTSASQISPRPRSNLGGSPRSPSVTA 283
Score = 103 bits (219), Expect = 2e-021
Identities = 40/57 (70%), Positives = 42/57 (73%)
Frame = -2 / +1
Query: 345 SDGTRSVRWGRWCPGQXWQAPAW*TRRGCPG*MVLHARLPSASSDPRPDQKHIGNSW 175
S GTRS R GRWCPGQ W PAW*T RGCP *M LPSASS P+P+QK IGNSW
Sbjct: 376 SHGTRSARSGRWCPGQPWPVPAW*THRGCPS*MAQCDHLPSASSTPQPNQKRIGNSW 546
Score = 28.6 bits (56), Expect(3) = 2e-068
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +2 / -1
Query: 554 FWWPASSCLVG 586
FWWPASS L+G
Sbjct: 173 FWWPASSFLLG 141
Score = 28.1 bits (55), Expect(3) = 2e-068
Identities = 8/12 (66%), Positives = 12/12 (100%)
Frame = +2 / -2
Query: 644 EIPWLML*CYSF 679
++PWL++*CYSF
Sbjct: 82 KLPWLLV*CYSF 47
Score = 24.4 bits (47), Expect(3) = 2e-058
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = -2 / +1
Query: 585 PTKQLEAGHQKF 550
P ++LEAGHQ F
Sbjct: 142 PRRKLEAGHQNF 177
Score = 22.1 bits (42), Expect(3) = 2e-058
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = -2 / +3
Query: 681 EKE*HYSINQG 649
+KE*HY+ NQG
Sbjct: 45 KKE*HYTNNQG 77
Score = 21.7 bits (41), Expect(2) = 2e-030
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +1 / -3
Query: 499 PPPETSKARTEEEHGTWKFLVACF*L 576
PPP ++ ++ LVACF*L
Sbjct: 228 PPPPPKASKE*TGVQYYEILVACF*L 151
>gb|BQ757608.1|BQ757608 EBem10_SQ004_K13_R embryo, 2 Day germination, no treatment, cv
Optic, EBem10 Hordeum vulgare subsp. vulgare cDNA clone
EBem10_SQ004_K13 5', mRNA sequence
Length = 479
Score = 249 bits (539), Expect(2) = 4e-068
Identities = 101/118 (85%), Positives = 108/118 (91%)
Frame = +3 / +3
Query: 162 DGKQTRSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAXVVQDTIDPNARIEFR 341
DGKQTRSFQYVSDLVEGLM+LMEG+H+GPFNLGNPGEFTMLELA VVQDTIDPNARIEFR
Sbjct: 3 DGKQTRSFQYVSDLVEGLMRLMEGDHIGPFNLGNPGEFTMLELAKVVQDTIDPNARIEFR 182
Query: 342 QNTXDDPHKRKPDIGRAKELLGWEPKIPLREGLPLMVTDFRKRIFGDQDTAAATPGNQ 515
+NT DDPHKRKPDI +AKE LGWEPKI LR+GLPLMVTDFRKRIFGDQD+AA Q
Sbjct: 183 ENTQDDPHKRKPDITKAKEQLGWEPKIALRDGLPLMVTDFRKRIFGDQDSAATATEGQ 356
Score = 223 bits (481), Expect(2) = 1e-058
Identities = 94/118 (79%), Positives = 99/118 (83%)
Frame = -1 / -2
Query: 514 WFPGVAAAVSWSPKMRLRKSVTMRGRPSRRGIFGSHPRSSLARPMSGLRLCGSSWVF*RN 335
W AA+SWSP +RLRKSVTMRGRPSRR I GSHP SLA +SGLRLCGSSWVF RN
Sbjct: 355 WPSVAVAALSWSPNIRLRKSVTMRGRPSRRAILGSHPSCSLALVISGLRLCGSSWVFSRN 176
Query: 334 SIRALGSMVSWTTLASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPS 161
SIRA GSMVSWTTLASSSMVNSPGLP+LNGP SPSIS I PST+SETYWKLLVC PS
Sbjct: 175 SIRAFGSMVSWTTLASSSMVNSPGLPKLNGPM*SPSISLINPSTKSETYWKLLVCLPS 2
Score = 145 bits (311), Expect = 3e-034
Identities = 64/105 (60%), Positives = 75/105 (71%)
Frame = -3 / -1
Query: 476 EDALAEVGDHEGKALAEGDLWLPPKELLGTADXXXXXXXXXXXXLTELDPCVGVDGVLDN 297
E LAEVG+HEG+A+ EGDL LPP+ LLG D LTELDP V VDGVLDN
Sbjct: 317 EYPLAEVGNHEGEAVTEGDLGLPPELLLGLGDIWLALVRVVLGVLTELDPRVRVDGVLDN 138
Query: 296 XGKLQHGELAGVAQVKWSYMLAFHQLHQTLDQIRNILETPGLLSI 162
G+ QHGEL GVAQV+W ++ FHQ HQ L+QI N+LETPGLL+I
Sbjct: 137 LGQFQHGELTGVAQVEWPNVITFHQPHQPLNQIGNVLETPGLLAI 3
Score = 129 bits (276), Expect(2) = 2e-029
Identities = 56/86 (65%), Positives = 62/86 (72%)
Frame = +2 / +2
Query: 164 WKANQEFPICF*SGRGSDEADGRRACRTI*PGQPRRVHHAGACQXCPGHHRPQRTDRVPS 343
W+A+QEFPI F G G DEADGR + I GQPR VHHAG Q CPGHHRP+R DRVP
Sbjct: 5 WQADQEFPIRFRFG*GVDEADGR*SHWAIQLGQPR*VHHAGTGQGCPGHHRPERADRVP* 184
Query: 344 EHPXRPTQAQARHRPCQGAPWVGAKD 421
EHP RP QAQAR+ QGA VGA+D
Sbjct: 185 EHPGRPAQAQARYHQGQGATRVGAQD 262
Score = 116 bits (249), Expect = 1e-025
Identities = 53/92 (57%), Positives = 56/92 (60%)
Frame = +1 / +1
Query: 163 MESKPGVSNMFLIWSRV**S*WKASM*DHLTWATPASSPCWSLPXLSRTPSTPTHGSSSV 342
M S+PGVSN F IW R ** *WK H TWATP SSPCW+ P LSRTPST T GSSSV
Sbjct: 4 MASRPGVSNTFPIWLRG**G*WKVITLGHSTWATPVSSPCWNWPRLSRTPSTRTRGSSSV 183
Query: 343 RXXXXXXXXXXXXXXVPRSSLGGSQRSPSARA 438
R PRS+ GGS RSPS A
Sbjct: 184 RTPRTTRTSASQISPRPRSNSGGSPRSPSVTA 279
Score = 105 bits (223), Expect = 4e-022
Identities = 41/61 (67%), Positives = 44/61 (72%)
Frame = -2 / -3
Query: 345 SDGTRSVRWGRWCPGQXWQAPAW*TRRGCPG*MVLHARLPSASSDPRPDQKHIGNSWFAF 166
S GTRS R GRWCPGQ W PAW*T RGCP *M LPSASS P+P++K IGNSW A
Sbjct: 186 SHGTRSARSGRWCPGQPWPVPAW*THRGCPS*MAQCDHLPSASSTPQPNRKRIGNSWSAC 7
Query: 165 H 163
H
Sbjct: 6 H 4
Score = 29.0 bits (57), Expect(2) = 4e-068
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +2 / +2
Query: 554 FWWPASSCLVG 586
FWWPASS L+G
Sbjct: 389 FWWPASSLLLG 421
Score = 23.5 bits (45), Expect(2) = 1e-058
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -2 / -3
Query: 585 PTKQLEAGHQKF 550
P +LEAGHQ F
Sbjct: 420 PRSKLEAGHQNF 385
Score = 21.7 bits (41), Expect(2) = 2e-029
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +1 / +1
Query: 499 PPPETSKARTEEEHGTWKFLVACF*L 576
PPP ++ ++ LVACF*L
Sbjct: 334 PPPPPKASKE*TGVQYYEILVACF*L 411
>gb|CV063225.1|CV063225 BNEL88a10 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL88a10 5' similar to dTDP-glucose
4-6-dehydratase-like protein, mRNA sequence
Length = 622
Score = 247 bits (533), Expect(2) = 2e-067
Identities = 100/117 (85%), Positives = 107/117 (91%)
Frame = +3 / +1
Query: 165 GKQTRSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAXVVQDTIDPNARIEFRQ 344
GKQTRSFQYVSDLVEGLM+LMEG+H+GPFNLGNPGEFTMLELA VVQDTIDPNARIEFR+
Sbjct: 1 GKQTRSFQYVSDLVEGLMRLMEGDHIGPFNLGNPGEFTMLELAKVVQDTIDPNARIEFRE 180
Query: 345 NTXDDPHKRKPDIGRAKELLGWEPKIPLREGLPLMVTDFRKRIFGDQDTAAATPGNQ 515
NT DDPHKRKPDI +AKE LGWEPKI LR+GLPLMVTDFRKRIFGDQD+AA Q
Sbjct: 181 NTQDDPHKRKPDITKAKEQLGWEPKIALRDGLPLMVTDFRKRIFGDQDSAATATEGQ 351
Score = 216 bits (466), Expect(2) = 2e-056
Identities = 91/115 (79%), Positives = 96/115 (83%)
Frame = -1 / -3
Query: 514 WFPGVAAAVSWSPKMRLRKSVTMRGRPSRRGIFGSHPRSSLARPMSGLRLCGSSWVF*RN 335
W AA+SWSP +RLRKSVTMRGRPSRR I GSHP S A +SGLRLCGSSWVF RN
Sbjct: 350 WPSVAVAALSWSPNIRLRKSVTMRGRPSRRAILGSHPSCSFALVISGLRLCGSSWVFSRN 171
Query: 334 SIRALGSMVSWTTLASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVC 170
SIRA GSMVSWTTLASSSMVNSPGLP+LNGP SPSIS I PST+SETYWKLLVC
Sbjct: 170 SIRAFGSMVSWTTLASSSMVNSPGLPKLNGPM*SPSISLINPSTKSETYWKLLVC 6
Score = 142 bits (305), Expect = 2e-033
Identities = 63/104 (60%), Positives = 74/104 (71%)
Frame = -3 / -2
Query: 476 EDALAEVGDHEGKALAEGDLWLPPKELLGTADXXXXXXXXXXXXLTELDPCVGVDGVLDN 297
E LAEVG+HEG+A+ EGDL LPP+ LL D LTELDP V VDGVLDN
Sbjct: 312 EYPLAEVGNHEGEAVTEGDLGLPPELLLCLGDIWLALVRVVLGVLTELDPRVRVDGVLDN 133
Query: 296 XGKLQHGELAGVAQVKWSYMLAFHQLHQTLDQIRNILETPGLLS 165
G+ QHGEL GVAQV+W ++ FHQ HQ L+QIRN+LETPGLL+
Sbjct: 132 LGQFQHGELTGVAQVEWPNVITFHQPHQPLNQIRNVLETPGLLA 1
Score = 124 bits (266), Expect(2) = 5e-028
Identities = 55/85 (64%), Positives = 62/85 (72%)
Frame = +2 / +3
Query: 167 KANQEFPICF*SGRGSDEADGRRACRTI*PGQPRRVHHAGACQXCPGHHRPQRTDRVPSE 346
+A+QEFPI F* G G DEADGR + I GQPR VHHAG Q CPGHHRP+R DRVP E
Sbjct: 3 QADQEFPIRF*FG*GVDEADGR*SHWAIQLGQPR*VHHAGTGQGCPGHHRPERADRVP*E 182
Query: 347 HPXRPTQAQARHRPCQGAPWVGAKD 421
HP RP QAQAR+ +GA VGA+D
Sbjct: 183 HPGRPAQAQARYHQGKGATRVGAQD 257
Score = 114 bits (244), Expect = 5e-025
Identities = 52/90 (57%), Positives = 55/90 (61%)
Frame = +1 / +2
Query: 169 SKPGVSNMFLIWSRV**S*WKASM*DHLTWATPASSPCWSLPXLSRTPSTPTHGSSSVRX 348
S+PGVSN FLIW R ** *WK H TWATP SSPCW+ P LSRTPST T GSSSVR
Sbjct: 5 SRPGVSNTFLIWLRG**G*WKVITLGHSTWATPVSSPCWNWPRLSRTPSTRTRGSSSVRT 184
Query: 349 XXXXXXXXXXXXXVPRSSLGGSQRSPSARA 438
RS+ GGS RSPS A
Sbjct: 185 PRTTRTSASQISPRQRSNSGGSPRSPSVTA 274
Score = 104 bits (221), Expect = 8e-022
Identities = 41/59 (69%), Positives = 43/59 (72%)
Frame = -2 / -1
Query: 345 SDGTRSVRWGRWCPGQXWQAPAW*TRRGCPG*MVLHARLPSASSDPRPDQKHIGNSWFA 169
S GTRS R GRWCPGQ W PAW*T RGCP *M LPSASS P+P+QK IGNSW A
Sbjct: 181 SHGTRSARSGRWCPGQPWPVPAW*THRGCPS*MAQCDHLPSASSTPQPNQKRIGNSWSA 5
Score = 29.0 bits (57), Expect(2) = 2e-067
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +2 / +3
Query: 554 FWWPASSCLVG 586
FWWPASS L+G
Sbjct: 384 FWWPASSLLLG 416
Score = 23.5 bits (45), Expect(2) = 2e-056
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -2 / -1
Query: 585 PTKQLEAGHQKF 550
P +LEAGHQ F
Sbjct: 415 PRSKLEAGHQNF 380
Score = 21.7 bits (41), Expect(2) = 5e-028
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +1 / +2
Query: 499 PPPETSKARTEEEHGTWKFLVACF*L 576
PPP ++ ++ LVACF*L
Sbjct: 329 PPPPPKASKE*TGVQYYEILVACF*L 406
>gb|BF260520.3|BF260520 HVSMEf0022D16f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0022D16f, mRNA sequence
Length = 691
Score = 242 bits (522), Expect(3) = 1e-066
Identities = 99/125 (79%), Positives = 108/125 (86%)
Frame = +3 / +2
Query: 123 AQALXXEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAXVV 302
A AL EPLT YGDGK TRS QY+SDLVEG M+LMEG+H+ PFN GNPGEFTMLELA VV
Sbjct: 14 AHALTKEPLTAYGDGKHTRSLQYLSDLVEGAMRLMEGDHIVPFNSGNPGEFTMLELANVV 193
Query: 303 QDTIDPNARIEFRQNTXDDPHKRKPDIGRAKELLGWEPKIPLREGLPLMVTDFRKRIFGD 482
QDTI PNARIEFR+NT DDP+KR PDI +AKE LGWEPKI LR+GLPLMVTDFRKRIFGD
Sbjct: 194 QDTIYPNARIEFRENTHDDPYKRMPDITKAKEQLGWEPKIALRDGLPLMVTDFRKRIFGD 373
Query: 483 QDTAA 497
D+AA
Sbjct: 374 HDSAA 388
Score = 214 bits (462), Expect(2) = 1e-055
Identities = 98/132 (74%), Positives = 104/132 (78%)
Frame = -1 / -2
Query: 514 WFPGVAAAVSWSPKMRLRKSVTMRGRPSRRGIFGSHPRSSLARPMSGLRLCGSSWVF*RN 335
W AA+SWSP +RLRKSVTMRGRPSRR I GSHP SLA +SG+RL GSSWVF RN
Sbjct: 405 WPSVTVAALSWSPNIRLRKSVTMRGRPSRRAILGSHPSCSLALVISGMRLYGSSWVFSRN 226
Query: 334 SIRALGSMVSWTTLASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP* 155
SIRALG MVS TTLASSSMVNSPGLP LNG SPSIS I PST+SE Y KLLVC PSP*
Sbjct: 225 SIRALG*MVSCTTLASSSMVNSPGLPELNGTM*SPSISLIAPSTKSERYCKLLVCLPSP* 46
Query: 154 TVNGSFXSA*AT 119
V GSF SA*A+
Sbjct: 45 AVKGSFVSA*AS 10
Score = 147 bits (316), Expect = 6e-035
Identities = 65/112 (58%), Positives = 80/112 (71%)
Frame = -3 / -1
Query: 476 EDALAEVGDHEGKALAEGDLWLPPKELLGTADXXXXXXXXXXXXLTELDPCVGVDGVLDN 297
E LAEVG+HEG+A+ EGDL LPPK LLG D LTELDP VGVDGVL N
Sbjct: 367 EYPLAEVGNHEGQAVTEGDLGLPPKLLLGLGDIWHALVRVVMGVLTELDPRVGVDGVLHN 188
Query: 296 XGKLQHGELAGVAQVKWSYMLAFHQLHQTLDQIRNILETPGLLSITINRQWL 141
G+ QHGEL GVA+V+W ++AFHQ H+ L+QIR +L TPG+L+I ++RQ L
Sbjct: 187 VGQFQHGELTGVARVEWHNVIAFHQPHRPLNQIRKVL*TPGVLAIAVSRQRL 32
Score = 142 bits (305), Expect = 2e-033
Identities = 63/100 (63%), Positives = 68/100 (68%)
Frame = +2 / +1
Query: 122 CSGTXEXAIDGLW*WKANQEFPICF*SGRGSDEADGRRACRTI*PGQPRRVHHAGACQXC 301
CS E A DGL W+A+QEF I F* G G DEADGRR+ I GQPR VHHAG Q C
Sbjct: 13 CSRANEGAFDGLRRWQAHQEFTIPF*FG*GGDEADGRRSHCAIQLGQPR*VHHAGTGQRC 192
Query: 302 PGHHRPQRTDRVPSEHPXRPTQAQARHRPCQGAPWVGAKD 421
GHH PQR DRVP EHP RP QA AR+ QGA WVGA+D
Sbjct: 193 AGHHLPQRADRVP*EHP*RPVQAHARYHQGQGATWVGAQD 312
Score = 118 bits (253), Expect = 3e-026
Identities = 48/76 (63%), Positives = 51/76 (67%)
Frame = -2 / -3
Query: 345 SDGTRSVRWGRWCPGQXWQAPAW*TRRGCPG*MVLHARLPSASSDPRPDQKHIGNSWFAF 166
S GTRS RWGRWCP Q W PAW*T RGCP *M RLPSASS P+P+QK I NSW A
Sbjct: 236 SHGTRSARWGRWCPAQRWPVPAW*THRGCPS*MAQCDRLPSASSPPQPNQKGIVNSWCAC 57
Query: 165 HHHKPSMAXSSVPEQR 118
H KPS A S E +
Sbjct: 56 HRRKPSKAPSLAREHQ 9
Score = 116 bits (249), Expect = 1e-025
Identities = 58/106 (54%), Positives = 61/106 (57%)
Frame = +1 / +3
Query: 121 LLRH*XXSH*RFMVMESKPGVSNMFLIWSRV**S*WKASM*DHLTWATPASSPCWSLPXL 300
+L * S *R M S PGV N FLIW R * *WKA H T ATP SSPCW+ P L
Sbjct: 12 MLTR*RRSL*RLTAMASTPGVYNTFLIWLRGR*G*WKAITLCHSTRATPVSSPCWNWPTL 191
Query: 301 SRTPSTPTHGSSSVRXXXXXXXXXXXXXXVPRSSLGGSQRSPSARA 438
RTPSTPT GSSSVR PRS+LGGS RSPS A
Sbjct: 192 CRTPSTPTRGSSSVRTPMTTRTSACQISPRPRSNLGGSPRSPSVTA 329
Score = 28.1 bits (55), Expect(3) = 1e-066
Identities = 8/12 (66%), Positives = 12/12 (100%)
Frame = +2 / +2
Query: 644 EIPWLML*CYSF 679
++PWL++*CYSF
Sbjct: 530 KLPWLLV*CYSF 565
Score = 24.9 bits (48), Expect(2) = 1e-055
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = -1 / -3
Query: 799 YDXMLSTKN*IIQVY 755
Y+ ++STKN* IQ+Y
Sbjct: 671 YNSIISTKN*KIQIY 627
Score = 22.1 bits (42), Expect(3) = 1e-066
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +2 / +1
Query: 554 FWWPASSCLVG 586
FW PASS L+G
Sbjct: 439 FWRPASSFLLG 471
>gb|BM443008.2|BM443008 EBro02_SQ002_C21_R root, 3 week, hydroponic grown, low nitrogen, cv
Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone
EBro02_SQ002_C21 5', mRNA sequence
Length = 465
Score = 248 bits (536), Expect = 3e-065
Identities = 102/113 (90%), Positives = 106/113 (93%)
Frame = +3 / +2
Query: 45 VXIARIFNTYGPRMCIDDGRVVS*XVAQALXXEPLTVYGDGKQTRSFQYVSDLVEGLMKL 224
V IARIFNTYGPRMCIDDGRVVS VAQAL EPLTVYGDGKQTRSFQYVSDLVEGLM+L
Sbjct: 125 VRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMRL 304
Query: 225 MEGEHVGPFNLGNPGEFTMLELAXVVQDTIDPNARIEFRQNTXDDPHKRKPDI 383
MEG+H+GPFNLGNPGEFTMLELA VVQDTIDPNARIEFR+NT DDPHKRKPDI
Sbjct: 305 MEGDHIGPFNLGNPGEFTMLELAKVVQDTIDPNARIEFRENTQDDPHKRKPDI 463
Score = 221 bits (478), Expect(2) = 2e-059
Identities = 97/113 (85%), Positives = 100/113 (88%)
Frame = -1 / -1
Query: 382 MSGLRLCGSSWVF*RNSIRALGSMVSWTTLASSSMVNSPGLPRLNGPTCSPSISFIRPST 203
+SGLRLCGSSWVF RNSIRA GSMVSWTTLASSSMVNSPGLP+LNGP SPSIS I PST
Sbjct: 462 ISGLRLCGSSWVFSRNSIRAFGSMVSWTTLASSSMVNSPGLPKLNGPM*SPSISLINPST 283
Query: 202 RSETYWKLLVCFPSP*TVNGSFXSA*ATX*LTTRPSSMHMRGPYVLKIRAIXT 44
+SETYWKLLVC PSP*TV GSF SA*AT LTTRPSSMHMRGP VLKIRAI T
Sbjct: 282 KSETYWKLLVCLPSP*TVKGSFLSA*ATKLLTTRPSSMHMRGP*VLKIRAILT 124
Score = 176 bits (379), Expect = 1e-043
Identities = 73/111 (65%), Positives = 81/111 (72%)
Frame = +2 / +1
Query: 50 DRTYLQHIWPSHVH*RWPCCQLXRCSGTXEXAIDGLW*WKANQEFPICF*SGRGSDEADG 229
D + L H+WP+HVH*RWPCCQ CSG E A DGL W+A+QEFPI F* G G DEADG
Sbjct: 130 DCSDL*HLWPAHVH*RWPCCQQLCCSGAKEGAFDGLRRWQADQEFPIRF*FG*GVDEADG 309
Query: 230 RRACRTI*PGQPRRVHHAGACQXCPGHHRPQRTDRVPSEHPXRPTQAQARH 382
R + I GQPR VHHAG Q CPGHHRP+R DRVP EHP RP QAQAR+
Sbjct: 310 R*SHWAIQLGQPR*VHHAGTGQGCPGHHRPERADRVP*EHPGRPAQAQARY 462
Score = 163 bits (351), Expect = 9e-040
Identities = 67/100 (67%), Positives = 71/100 (71%)
Frame = -2 / -2
Query: 345 SDGTRSVRWGRWCPGQXWQAPAW*TRRGCPG*MVLHARLPSASSDPRPDQKHIGNSWFAF 166
S GTRS R GRWCPGQ W PAW*T RGCP *M LPSASS P+P+QK IGNSW A
Sbjct: 425 SHGTRSARSGRWCPGQPWPVPAW*THRGCPS*MAQCDHLPSASSTPQPNQKRIGNSWSAC 246
Query: 165 HHHKPSMAXSSVPEQRXN*QHGHRQCTCEGHMC*RYVRS* 46
H KPS A S PEQ+ *QHGHRQCTC GH C*R +S*
Sbjct: 245 HRRKPSKAPSLAPEQQSC*QHGHRQCTCAGHRC*RSEQS* 126
Score = 152 bits (327), Expect = 2e-036
Identities = 66/102 (64%), Positives = 79/102 (77%)
Frame = -3 / -3
Query: 341 TELDPCVGVDGVLDNXGKLQHGELAGVAQVKWSYMLAFHQLHQTLDQIRNILETPGLLSI 162
TELDP V VDGVLDN G+ QHGEL GVAQV+W ++ FHQ HQ L+QIRN+LETPGLL+I
Sbjct: 421 TELDPRVRVDGVLDNLGQFQHGELTGVAQVEWPNVITFHQPHQPLNQIRNVLETPGLLAI 242
Query: 161 TINRQWLXXQCLSNXLTDNTAIVNAHARAICVEDTCDXNSRL 36
+NRQ L LSN + DNTAIVNAHARAI V+D + N ++
Sbjct: 241 AVNRQRLLP*RLSNKVADNTAIVNAHARAIGVKDPSNPNLKV 116
Score = 138 bits (295), Expect = 5e-032
Identities = 65/95 (68%), Positives = 67/95 (70%)
Frame = +1 / +3
Query: 61 SSTHMALACALTMAVLSVXSLLRH*XXSH*RFMVMESKPGVSNMFLIWSRV**S*WKASM 240
S T MA ACALTMAVLS LLR * S *RF M S+PGVSN FLIW R ** *WK
Sbjct: 141 SLTPMARACALTMAVLSATLLLRR*GRSL*RFTAMASRPGVSNTFLIWLRG**G*WKVIT 320
Query: 241 *DHLTWATPASSPCWSLPXLSRTPSTPTHGSSSVR 345
H TWATP SSPCW+ P LSRTPST T GSSSVR
Sbjct: 321 LGHSTWATPVSSPCWNWPRLSRTPSTRTRGSSSVR 425
Score = 27.6 bits (54), Expect(2) = 2e-059
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = -3 / -2
Query: 32 HGGNPWSRF 6
HGG+PWSRF
Sbjct: 110 HGGSPWSRF 84
>gb|AV909217.1|AV909217 AV909217 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak12a20 5', mRNA sequence
Length = 630
Score = 242 bits (523), Expect = 2e-063
Identities = 98/129 (75%), Positives = 111/129 (86%)
Frame = +3 / +2
Query: 96 DGRVVS*XVAQALXXEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEF 275
DGRVVS VAQAL P+TVYGDGKQTRSFQYVSDLV GLM LME +H+GPFNLGNPGEF
Sbjct: 5 DGRVVSNFVAQALRKHPMTVYGDGKQTRSFQYVSDLVAGLMALMESDHIGPFNLGNPGEF 184
Query: 276 TMLELAXVVQDTIDPNARIEFRQNTXDDPHKRKPDIGRAKELLGWEPKIPLREGLPLMVT 455
TMLELA VV++TIDP + IEF+ NT DDPH RKPDI +AK++LGWEPK+ L+EGLPLMVT
Sbjct: 185 TMLELAEVVKETIDPMSTIEFKPNTADDPHMRKPDITKAKQMLGWEPKVSLKEGLPLMVT 364
Query: 456 DFRKRIFGD 482
DFRKRI +
Sbjct: 365 DFRKRILDE 391
Score = 159 bits (341), Expect = 2e-038
Identities = 79/132 (59%), Positives = 91/132 (68%)
Frame = -1 / -1
Query: 490 VSWSPKMRLRKSVTMRGRPSRRGIFGSHPRSSLARPMSGLRLCGSSWVF*RNSIRALGSM 311
+ +S K+ LRKSVT++GRPS R FGS P A +SG + GSS V NSI +GS+
Sbjct: 399 LDYSSKILLRKSVTIKGRPSLRDTFGSQPSICFALVISGFLIWGSSAVLGLNSIVDIGSI 220
Query: 310 VSWTTLASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVNGSFXS 131
VS+TT ASS+MVNSPG PRL GP S SI I P+TRSETY KL VCFPSP TV G S
Sbjct: 219 VSFTTSASSNMVNSPGFPRLKGPI*SLSIRAINPATRSETY*KLRVCFPSPYTVIGCLRS 40
Query: 130 A*ATX*LTTRPS 95
A AT LTTRPS
Sbjct: 39 ACATKLLTTRPS 4
>gb|AV911101.1|AV911101 AV911101 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak12a20 3', mRNA sequence
Length = 680
Score = 237 bits (511), Expect = 8e-062
Identities = 96/127 (75%), Positives = 109/127 (85%)
Frame = +3 / -2
Query: 102 RVVS*XVAQALXXEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTM 281
RVVS VAQAL P+TVYGDGKQTRSFQYVSDLV GLM LME +H+GPFNLGNPGEFTM
Sbjct: 679 RVVSNFVAQALRKHPMTVYGDGKQTRSFQYVSDLVAGLMALMESDHIGPFNLGNPGEFTM 500
Query: 282 LELAXVVQDTIDPNARIEFRQNTXDDPHKRKPDIGRAKELLGWEPKIPLREGLPLMVTDF 461
LELA VV++TIDP + IEF+ NT DDPH RKPDI +AK++LGWEPK+ L+EGLPLMVTDF
Sbjct: 499 LELAEVVKETIDPMSTIEFKPNTADDPHMRKPDITKAKQMLGWEPKVSLKEGLPLMVTDF 320
Query: 462 RKRIFGD 482
RKRI +
Sbjct: 319 RKRILDE 299
Score = 154 bits (330), Expect = 7e-037
Identities = 77/130 (59%), Positives = 89/130 (68%)
Frame = -1 / +3
Query: 490 VSWSPKMRLRKSVTMRGRPSRRGIFGSHPRSSLARPMSGLRLCGSSWVF*RNSIRALGSM 311
+ +S K+ LRKSVT++GRPS R FGS P A +SG + GSS V NSI +GS+
Sbjct: 291 LDYSSKILLRKSVTIKGRPSLRDTFGSQPSICFALVISGFLIWGSSAVLGLNSIVDIGSI 470
Query: 310 VSWTTLASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVNGSFXS 131
VS+TT ASS+MVNSPG PRL GP S SI I P+TRSETY KL VCFPSP TV G S
Sbjct: 471 VSFTTSASSNMVNSPGFPRLKGPI*SLSIRAINPATRSETY*KLRVCFPSPYTVIGCLRS 650
Query: 130 A*ATX*LTTR 101
A AT LTTR
Sbjct: 651 ACATKLLTTR 680
>gb|BJ477449.1|BJ477449 BJ477449 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal41g23 3', mRNA sequence
Length = 679
Score = 237 bits (511), Expect = 8e-062
Identities = 96/127 (75%), Positives = 109/127 (85%)
Frame = +3 / -1
Query: 102 RVVS*XVAQALXXEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTM 281
RVVS VAQAL P+TVYGDGKQTRSFQYVSDLV GLM LME +H+GPFNLGNPGEFTM
Sbjct: 679 RVVSNFVAQALRKHPMTVYGDGKQTRSFQYVSDLVAGLMALMESDHIGPFNLGNPGEFTM 500
Query: 282 LELAXVVQDTIDPNARIEFRQNTXDDPHKRKPDIGRAKELLGWEPKIPLREGLPLMVTDF 461
LELA VV++TIDP + IEF+ NT DDPH RKPDI +AK++LGWEPK+ L+EGLPLMVTDF
Sbjct: 499 LELAEVVKETIDPMSTIEFKPNTADDPHMRKPDITKAKQMLGWEPKVSLKEGLPLMVTDF 320
Query: 462 RKRIFGD 482
RKRI +
Sbjct: 319 RKRILDE 299
Score = 151 bits (325), Expect = 4e-036
Identities = 76/129 (58%), Positives = 88/129 (68%)
Frame = -1 / +3
Query: 490 VSWSPKMRLRKSVTMRGRPSRRGIFGSHPRSSLARPMSGLRLCGSSWVF*RNSIRALGSM 311
+ +S K+ LRKSVT++GRPS R FGS P A +SG + GSS V NSI +GS+
Sbjct: 291 LDYSSKILLRKSVTIKGRPSLRDTFGSQPSICFALVISGFLIWGSSAVLGLNSIVDIGSI 470
Query: 310 VSWTTLASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVNGSFXS 131
VS+TT ASS+MVNSPG PRL GP S SI I P+TRSETY KL VCFPSP TV G S
Sbjct: 471 VSFTTSASSNMVNSPGFPRLKGPI*SLSIRAINPATRSETY*KLRVCFPSPYTVIGCLRS 650
Query: 130 A*ATX*LTT 104
A AT LTT
Sbjct: 651 ACATKLLTT 677
>gb|BI960078.1|BI960078 HVSMEn0023C04f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0023C04f, mRNA sequence
Length = 617
Score = 197 bits (425), Expect(2) = 5e-058
Identities = 80/94 (85%), Positives = 83/94 (88%)
Frame = +3 / +3
Query: 204 VEGLMKLMEGEHVGPFNLGNPGEFTMLELAXVVQDTIDPNARIEFRQNTXDDPHKRKPDI 383
+ G KLMEGEHVGPFNLGNPGEFTMLELA VVQDTIDPNARIEFR NT DDPHKRKPDI
Sbjct: 150 LRG*XKLMEGEHVGPFNLGNPGEFTMLELAKVVQDTIDPNARIEFRANTADDPHKRKPDI 329
Query: 384 GRAKELLGWEPKIPLREGLPLMVTDFRKRIFGDQ 485
+AKELLGWEPK+ LR GLPLMV DFR RIFGDQ
Sbjct: 330 TKAKELLGWEPKVALRNGLPLMVXDFRTRIFGDQ 431
Score = 159 bits (341), Expect(2) = 2e-052
Identities = 71/92 (77%), Positives = 74/92 (80%)
Frame = -1 / -2
Query: 484 WSPKMRLRKSVTMRGRPSRRGIFGSHPRSSLARPMSGLRLCGSSWVF*RNSIRALGSMVS 305
WSPKMR+RKS TM GRP R GSHP SSLA MSGLRLCGSS V RNSI ALGSMVS
Sbjct: 430 WSPKMRVRKSWTMSGRPFRSATLGSHPSSSLALVMSGLRLCGSSAVLARNSILALGSMVS 251
Query: 304 WTTLASSSMVNSPGLPRLNGPTCSPSISFIRP 209
TTLASSS+VNSPG PRLNGPTCSPSIS +P
Sbjct: 250 CTTLASSSIVNSPGFPRLNGPTCSPSISXHQP 155
Score = 123 bits (264), Expect = 9e-028
Identities = 55/71 (77%), Positives = 55/71 (77%)
Frame = +3 / +2
Query: 57 RIFNTYGPRMCIDDGRVVS*XVAQALXXEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGE 236
RIFNTYGPRMCIDDGRVVS VAQAL EPLTVYGDGKQTRSFQYVSDLVEGLM G
Sbjct: 2 RIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMXADGGG 181
Query: 237 HVGPFNLGNPG 269
G G PG
Sbjct: 182 ARGAVQPGEPG 214
Score = 111 bits (237), Expect(2) = 2e-024
Identities = 50/71 (70%), Positives = 51/71 (71%)
Frame = -1 / -3
Query: 268 PGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVNGSFXSA*ATX*LTTRPSSM 89
PG P P P + I PSTRSETYWKLLVC PSP TV GSF SA AT LTTRPSSM
Sbjct: 213 PGSPG*TAPRAPPPSAXISPSTRSETYWKLLVCLPSPYTVRGSFLSAWATKLLTTRPSSM 34
Query: 88 HMRGPYVLKIR 56
HMRGP VLKIR
Sbjct: 33 HMRGP*VLKIR 1
Score = 94.5 bits (200), Expect(2) = 1e-029
Identities = 44/86 (51%), Positives = 53/86 (61%)
Frame = -3 / -1
Query: 476 EDALAEVGDHEGKALAEGDLWLPPKELLGTADXXXXXXXXXXXXLTELDPCVGVDGVLDN 297
EDA AEV DHE +A+ E L LPP++LLG D ELDPCVGVDGVL +
Sbjct: 422 EDAGAEVXDHEREAVPERHLGLPPEQLLGLGDVRLALVRVVGGVGPELDPCVGVDGVLHH 243
Query: 296 XGKLQHGELAGVAQVKWSYMLAFHQL 219
G+LQH EL V QV+ ++L HQL
Sbjct: 242 LGQLQHRELPRVPQVERPHVLPLHQL 165
Score = 85.4 bits (180), Expect(2) = 5e-021
Identities = 38/66 (57%), Positives = 42/66 (63%)
Frame = +2 / +2
Query: 221 ADGRRACRTI*PGQPRRVHHAGACQXCPGHHRPQRTDRVPSEHPXRPTQAQARHRPCQGA 400
ADG A + PG+P VH AGA Q GHHRPQR DRVP +H RP QAQA H QGA
Sbjct: 167 ADGGGARGAVQPGEPGGVHDAGAGQGGAGHHRPQRKDRVPGQHRRRPAQAQAGHHQGQGA 346
Query: 401 PWVGAK 418
VGA+
Sbjct: 347 ARVGAQ 364
Score = 67.0 bits (140), Expect(2) = 2e-052
Identities = 27/53 (50%), Positives = 39/53 (73%)
Frame = -3 / -2
Query: 218 HQTLDQIRNILETPGLLSITINRQWLXXQCLSNXLTDNTAIVNAHARAICVED 60
HQ L+QI ++LE P LL++ ++RQ L QCL + + D+ AIV+AHAR + VED
Sbjct: 163 HQPLNQIGDVLEAPRLLAVAVHRQGLLPQCLGDKVADDPAIVDAHARPVGVED 5
Score = 55.6 bits (115), Expect(2) = 1e-029
Identities = 25/57 (43%), Positives = 33/57 (57%)
Frame = -2 / -1
Query: 231 LPSASSDPRPDQKHIGNSWFAFHHHKPSMAXSSVPEQRXN*QHGHRQCTCEGHMC*R 61
L S P+PD++ G+S A PS A SSVP ++ *+ GHR+CTC C*R
Sbjct: 176 LHQLXSAPQPDRRRTGSSSSACRRRTPSGAPSSVPGRQSC*RPGHRRCTCAARRC*R 6
Score = 47.3 bits (97), Expect(2) = 5e-058
Identities = 23/52 (44%), Positives = 31/52 (59%)
Frame = +2 / +1
Query: 62 LQHIWPSHVH*RWPCCQLXRCSGTXEXAIDGLW*WKANQEFPICF*SGRGSD 217
LQH+ +HVH RWP Q GT E A DG+ +A++E P+ SG G+D
Sbjct: 7 LQHLRAAHVHRRWPGRQQLCRPGTEEGAPDGVRRRQADEELPVRLRSG*GAD 162
Score = 35.4 bits (71), Expect(2) = 5e-021
Identities = 22/50 (44%), Positives = 24/50 (48%)
Frame = +1 / +3
Query: 61 SSTHMALACALTMAVLSVXSLLRH*XXSH*RFMVMESKPGVSNMFLIWSR 210
SST ACA TMA S RH* S *R S+ G S+ IW R
Sbjct: 6 SSTPTGRACASTMAGSSATLSPRH*GRSP*RCTATASRRGASSTSPIWLR 155
Score = 22.6 bits (43), Expect(2) = 2e-024
Identities = 9/28 (32%), Positives = 13/28 (46%)
Frame = -1 / -2
Query: 514 WFPGVAAAVSWSPKMRLRKSVTMRGRPS 431
W P + SW+ R +S T+ PS
Sbjct: 430 WSPKMRVRKSWTMSGRPFRSATLGSHPS 347
>gb|BF256552.2|BF256552 HVSMEf0010F04f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0010F04f, mRNA sequence
Length = 840
Score = 217 bits (468), Expect = 7e-056
Identities = 90/143 (62%), Positives = 110/143 (76%)
Frame = +3 / +3
Query: 45 VXIARIFNTYGPRMCIDDGRVVS*XVAQALXXEPLTVYGDGKQTRSFQYVSDLVEGLMKL 224
+ IARIFNTYGPRM IDDGRVVS +AQA+ E LTV G QTRSF YV+D+V GLMKL
Sbjct: 132 IRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEALTVQKPGTQTRSFCYVADMVNGLMKL 311
Query: 225 MEGEHVGPFNLGNPGEFTMLELAXVVQDTIDPNARIEFRQNTXDDPHKRKPDIGRAKELL 404
M G++ GP N+GNPGEFTMLELA V++ I+P + +NT DDP +RKPDI +AKE+L
Sbjct: 312 MNGDNTGPINIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEVL 491
Query: 405 GWEPKIPLREGLPLMVTDFRKRI 473
WEPK+ LR+GL LM DFR+R+
Sbjct: 492 DWEPKVVLRDGLVLMEDDFRERL 560
Score = 103 bits (220), Expect(2) = 2e-028
Identities = 56/90 (62%), Positives = 59/90 (65%)
Frame = -1 / -3
Query: 319 GSMVSWTTLASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVNGS 140
G + S+T ASSSMVNSPG P L GP SP ISFIRP T S T KLLVC P TV S
Sbjct: 406 GLINSFTFSASSSMVNSPGFPMLMGPVLSPFISFIRPLTISAT*QKLLVCVPGFWTVRAS 227
Query: 139 FXSA*ATX*LTTRPSSMHMRGPYVLKIRAI 50
A*A LTTRPSSM + GP VLKI AI
Sbjct: 226 PRMA*AMKLLTTRPSSMFILGP*VLKILAI 137
Score = 42.3 bits (86), Expect(2) = 2e-028
Identities = 22/42 (52%), Positives = 25/42 (59%)
Frame = -1 / -3
Query: 469 RLRKSVTMRGRPSRRGIFGSHPRSSLARPMSGLRLCGSSWVF 344
R RKS +M +PSRR GS R+S A MSG GSS VF
Sbjct: 556 RSRKSSSMSTKPSRRTTLGSQSRTSFAFVMSGFLWRGSSGVF 431
>gb|AV919156.1|AV919156 AV919156 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags4m06 3', mRNA sequence
Length = 721
Score = 217 bits (468), Expect = 7e-056
Identities = 90/143 (62%), Positives = 110/143 (76%)
Frame = +3 / -1
Query: 45 VXIARIFNTYGPRMCIDDGRVVS*XVAQALXXEPLTVYGDGKQTRSFQYVSDLVEGLMKL 224
+ IARIFNTYGPRM IDDGRVVS +AQA+ E LTV G QTRSF YV+D+V GLMKL
Sbjct: 631 IRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEALTVQKPGTQTRSFCYVADMVNGLMKL 452
Query: 225 MEGEHVGPFNLGNPGEFTMLELAXVVQDTIDPNARIEFRQNTXDDPHKRKPDIGRAKELL 404
M G++ GP N+GNPGEFTMLELA V++ I+P + +NT DDP +RKPDI +AKE+L
Sbjct: 451 MNGDNTGPINIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEVL 272
Query: 405 GWEPKIPLREGLPLMVTDFRKRI 473
WEPK+ LR+GL LM DFR+R+
Sbjct: 271 DWEPKVVLRDGLVLMEDDFRERL 203
Score = 103 bits (220), Expect(2) = 2e-028
Identities = 56/90 (62%), Positives = 59/90 (65%)
Frame = -1 / +3
Query: 319 GSMVSWTTLASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVNGS 140
G + S+T ASSSMVNSPG P L GP SP ISFIRP T S T KLLVC P TV S
Sbjct: 357 GLINSFTFSASSSMVNSPGFPMLMGPVLSPFISFIRPLTISAT*QKLLVCVPGFWTVRAS 536
Query: 139 FXSA*ATX*LTTRPSSMHMRGPYVLKIRAI 50
A*A LTTRPSSM + GP VLKI AI
Sbjct: 537 PRMA*AMKLLTTRPSSMFILGP*VLKILAI 626
Score = 42.3 bits (86), Expect(2) = 2e-028
Identities = 22/42 (52%), Positives = 25/42 (59%)
Frame = -1 / +3
Query: 469 RLRKSVTMRGRPSRRGIFGSHPRSSLARPMSGLRLCGSSWVF 344
R RKS +M +PSRR GS R+S A MSG GSS VF
Sbjct: 207 RSRKSSSMSTKPSRRTTLGSQSRTSFAFVMSGFLWRGSSGVF 332
>gb|AV921718.1|AV921718 AV921718 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags12h18 3', mRNA sequence
Length = 626
Score = 217 bits (468), Expect = 7e-056
Identities = 90/143 (62%), Positives = 110/143 (76%)
Frame = +3 / -3
Query: 45 VXIARIFNTYGPRMCIDDGRVVS*XVAQALXXEPLTVYGDGKQTRSFQYVSDLVEGLMKL 224
+ IARIFNTYGPRM IDDGRVVS +AQA+ E LTV G QTRSF YV+D+V GLMKL
Sbjct: 573 IRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEALTVQKPGTQTRSFCYVADMVNGLMKL 394
Query: 225 MEGEHVGPFNLGNPGEFTMLELAXVVQDTIDPNARIEFRQNTXDDPHKRKPDIGRAKELL 404
M G++ GP N+GNPGEFTMLELA V++ I+P + +NT DDP +RKPDI +AKE+L
Sbjct: 393 MNGDNTGPINIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEVL 214
Query: 405 GWEPKIPLREGLPLMVTDFRKRI 473
WEPK+ LR+GL LM DFR+R+
Sbjct: 213 DWEPKVVLRDGLVLMEDDFRERL 145
Score = 103 bits (220), Expect(2) = 2e-028
Identities = 56/90 (62%), Positives = 59/90 (65%)
Frame = -1 / +2
Query: 319 GSMVSWTTLASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVNGS 140
G + S+T ASSSMVNSPG P L GP SP ISFIRP T S T KLLVC P TV S
Sbjct: 299 GLINSFTFSASSSMVNSPGFPMLMGPVLSPFISFIRPLTISAT*QKLLVCVPGFWTVRAS 478
Query: 139 FXSA*ATX*LTTRPSSMHMRGPYVLKIRAI 50
A*A LTTRPSSM + GP VLKI AI
Sbjct: 479 PRMA*AMKLLTTRPSSMFILGP*VLKILAI 568
Score = 42.3 bits (86), Expect(2) = 2e-028
Identities = 22/42 (52%), Positives = 25/42 (59%)
Frame = -1 / +2
Query: 469 RLRKSVTMRGRPSRRGIFGSHPRSSLARPMSGLRLCGSSWVF 344
R RKS +M +PSRR GS R+S A MSG GSS VF
Sbjct: 149 RSRKSSSMSTKPSRRTTLGSQSRTSFAFVMSGFLWRGSSGVF 274
>gb|BJ462617.1|BJ462617 BJ462617 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags29i05 5', mRNA sequence
Length = 604
Score = 217 bits (468), Expect = 7e-056
Identities = 90/143 (62%), Positives = 110/143 (76%)
Frame = +3 / +2
Query: 45 VXIARIFNTYGPRMCIDDGRVVS*XVAQALXXEPLTVYGDGKQTRSFQYVSDLVEGLMKL 224
+ IARIFNTYGPRM IDDGRVVS +AQA+ E LTV G QTRSF YV+D+V GLMKL
Sbjct: 164 IRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEALTVQKPGTQTRSFCYVADMVNGLMKL 343
Query: 225 MEGEHVGPFNLGNPGEFTMLELAXVVQDTIDPNARIEFRQNTXDDPHKRKPDIGRAKELL 404
M G++ GP N+GNPGEFTMLELA V++ I+P + +NT DDP +RKPDI +AKE+L
Sbjct: 344 MNGDNTGPINIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEVL 523
Query: 405 GWEPKIPLREGLPLMVTDFRKRI 473
WEPK+ LR+GL LM DFR+R+
Sbjct: 524 DWEPKVVLRDGLVLMEDDFRERL 592
Score = 103 bits (220), Expect(2) = 2e-028
Identities = 56/90 (62%), Positives = 59/90 (65%)
Frame = -1 / -2
Query: 319 GSMVSWTTLASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVNGS 140
G + S+T ASSSMVNSPG P L GP SP ISFIRP T S T KLLVC P TV S
Sbjct: 438 GLINSFTFSASSSMVNSPGFPMLMGPVLSPFISFIRPLTISAT*QKLLVCVPGFWTVRAS 259
Query: 139 FXSA*ATX*LTTRPSSMHMRGPYVLKIRAI 50
A*A LTTRPSSM + GP VLKI AI
Sbjct: 258 PRMA*AMKLLTTRPSSMFILGP*VLKILAI 169
Score = 42.3 bits (86), Expect(2) = 2e-028
Identities = 22/42 (52%), Positives = 25/42 (59%)
Frame = -1 / -2
Query: 469 RLRKSVTMRGRPSRRGIFGSHPRSSLARPMSGLRLCGSSWVF 344
R RKS +M +PSRR GS R+S A MSG GSS VF
Sbjct: 588 RSRKSSSMSTKPSRRTTLGSQSRTSFAFVMSGFLWRGSSGVF 463
>gb|BJ463352.1|BJ463352 BJ463352 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags27b23 5', mRNA sequence
Length = 635
Score = 217 bits (468), Expect = 7e-056
Identities = 90/143 (62%), Positives = 110/143 (76%)
Frame = +3 / +2
Query: 45 VXIARIFNTYGPRMCIDDGRVVS*XVAQALXXEPLTVYGDGKQTRSFQYVSDLVEGLMKL 224
+ IARIFNTYGPRM IDDGRVVS +AQA+ E LTV G QTRSF YV+D+V GLMKL
Sbjct: 95 IRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEALTVQKPGTQTRSFCYVADMVNGLMKL 274
Query: 225 MEGEHVGPFNLGNPGEFTMLELAXVVQDTIDPNARIEFRQNTXDDPHKRKPDIGRAKELL 404
M G++ GP N+GNPGEFTMLELA V++ I+P + +NT DDP +RKPDI +AKE+L
Sbjct: 275 MNGDNTGPINIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEVL 454
Query: 405 GWEPKIPLREGLPLMVTDFRKRI 473
WEPK+ LR+GL LM DFR+R+
Sbjct: 455 DWEPKVVLRDGLVLMEDDFRERL 523
Score = 103 bits (220), Expect(2) = 2e-028
Identities = 56/90 (62%), Positives = 59/90 (65%)
Frame = -1 / -3
Query: 319 GSMVSWTTLASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVNGS 140
G + S+T ASSSMVNSPG P L GP SP ISFIRP T S T KLLVC P TV S
Sbjct: 369 GLINSFTFSASSSMVNSPGFPMLMGPVLSPFISFIRPLTISAT*QKLLVCVPGFWTVRAS 190
Query: 139 FXSA*ATX*LTTRPSSMHMRGPYVLKIRAI 50
A*A LTTRPSSM + GP VLKI AI
Sbjct: 189 PRMA*AMKLLTTRPSSMFILGP*VLKILAI 100
Score = 42.3 bits (86), Expect(2) = 2e-028
Identities = 22/42 (52%), Positives = 25/42 (59%)
Frame = -1 / -3
Query: 469 RLRKSVTMRGRPSRRGIFGSHPRSSLARPMSGLRLCGSSWVF 344
R RKS +M +PSRR GS R+S A MSG GSS VF
Sbjct: 519 RSRKSSSMSTKPSRRTTLGSQSRTSFAFVMSGFLWRGSSGVF 394
>gb|BJ463970.1|BJ463970 BJ463970 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags31e18 5', mRNA sequence
Length = 623
Score = 217 bits (468), Expect = 7e-056
Identities = 90/143 (62%), Positives = 110/143 (76%)
Frame = +3 / +2
Query: 45 VXIARIFNTYGPRMCIDDGRVVS*XVAQALXXEPLTVYGDGKQTRSFQYVSDLVEGLMKL 224
+ IARIFNTYGPRM IDDGRVVS +AQA+ E LTV G QTRSF YV+D+V GLMKL
Sbjct: 80 IRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEALTVQKPGTQTRSFCYVADMVNGLMKL 259
Query: 225 MEGEHVGPFNLGNPGEFTMLELAXVVQDTIDPNARIEFRQNTXDDPHKRKPDIGRAKELL 404
M G++ GP N+GNPGEFTMLELA V++ I+P + +NT DDP +RKPDI +AKE+L
Sbjct: 260 MNGDNTGPINIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEVL 439
Query: 405 GWEPKIPLREGLPLMVTDFRKRI 473
WEPK+ LR+GL LM DFR+R+
Sbjct: 440 DWEPKVVLRDGLVLMEDDFRERL 508
Score = 103 bits (220), Expect(2) = 2e-028
Identities = 56/90 (62%), Positives = 59/90 (65%)
Frame = -1 / -3
Query: 319 GSMVSWTTLASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVNGS 140
G + S+T ASSSMVNSPG P L GP SP ISFIRP T S T KLLVC P TV S
Sbjct: 354 GLINSFTFSASSSMVNSPGFPMLMGPVLSPFISFIRPLTISAT*QKLLVCVPGFWTVRAS 175
Query: 139 FXSA*ATX*LTTRPSSMHMRGPYVLKIRAI 50
A*A LTTRPSSM + GP VLKI AI
Sbjct: 174 PRMA*AMKLLTTRPSSMFILGP*VLKILAI 85
Score = 42.3 bits (86), Expect(2) = 2e-028
Identities = 22/42 (52%), Positives = 25/42 (59%)
Frame = -1 / -3
Query: 469 RLRKSVTMRGRPSRRGIFGSHPRSSLARPMSGLRLCGSSWVF 344
R RKS +M +PSRR GS R+S A MSG GSS VF
Sbjct: 504 RSRKSSSMSTKPSRRTTLGSQSRTSFAFVMSGFLWRGSSGVF 379
>gb|BQ658243.1|BQ658243 HB09P05w BC Hordeum vulgare subsp. vulgare cDNA clone HB09P05
3-PRIME, mRNA sequence
Length = 665
Score = 217 bits (468), Expect = 7e-056
Identities = 90/143 (62%), Positives = 110/143 (76%)
Frame = +3 / -3
Query: 45 VXIARIFNTYGPRMCIDDGRVVS*XVAQALXXEPLTVYGDGKQTRSFQYVSDLVEGLMKL 224
+ IARIFNTYGPRM IDDGRVVS +AQA+ E LTV G QTRSF YV+D+V GLMKL
Sbjct: 624 IRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEALTVQKPGTQTRSFCYVADMVNGLMKL 445
Query: 225 MEGEHVGPFNLGNPGEFTMLELAXVVQDTIDPNARIEFRQNTXDDPHKRKPDIGRAKELL 404
M G++ GP N+GNPGEFTMLELA V++ I+P + +NT DDP +RKPDI +AKE+L
Sbjct: 444 MNGDNTGPINIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEVL 265
Query: 405 GWEPKIPLREGLPLMVTDFRKRI 473
WEPK+ LR+GL LM DFR+R+
Sbjct: 264 DWEPKVVLRDGLVLMEDDFRERL 196
Score = 103 bits (220), Expect(2) = 2e-028
Identities = 56/90 (62%), Positives = 59/90 (65%)
Frame = -1 / +2
Query: 319 GSMVSWTTLASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVNGS 140
G + S+T ASSSMVNSPG P L GP SP ISFIRP T S T KLLVC P TV S
Sbjct: 350 GLINSFTFSASSSMVNSPGFPMLMGPVLSPFISFIRPLTISAT*QKLLVCVPGFWTVRAS 529
Query: 139 FXSA*ATX*LTTRPSSMHMRGPYVLKIRAI 50
A*A LTTRPSSM + GP VLKI AI
Sbjct: 530 PRMA*AMKLLTTRPSSMFILGP*VLKILAI 619
Score = 42.3 bits (86), Expect(2) = 2e-028
Identities = 22/42 (52%), Positives = 25/42 (59%)
Frame = -1 / +2
Query: 469 RLRKSVTMRGRPSRRGIFGSHPRSSLARPMSGLRLCGSSWVF 344
R RKS +M +PSRR GS R+S A MSG GSS VF
Sbjct: 200 RSRKSSSMSTKPSRRTTLGSQSRTSFAFVMSGFLWRGSSGVF 325
>gb|BQ767952.1|BQ767952 EBro08_SQ010_E07_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ010_E07 5', mRNA sequence
Length = 605
Score = 217 bits (468), Expect = 7e-056
Identities = 90/143 (62%), Positives = 110/143 (76%)
Frame = +3 / +3
Query: 45 VXIARIFNTYGPRMCIDDGRVVS*XVAQALXXEPLTVYGDGKQTRSFQYVSDLVEGLMKL 224
+ IARIFNTYGPRM IDDGRVVS +AQA+ E LTV G QTRSF YV+D+V GLMKL
Sbjct: 39 IRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEALTVQKPGTQTRSFCYVADMVNGLMKL 218
Query: 225 MEGEHVGPFNLGNPGEFTMLELAXVVQDTIDPNARIEFRQNTXDDPHKRKPDIGRAKELL 404
M G++ GP N+GNPGEFTMLELA V++ I+P + +NT DDP +RKPDI +AKE+L
Sbjct: 219 MNGDNTGPINIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEVL 398
Query: 405 GWEPKIPLREGLPLMVTDFRKRI 473
WEPK+ LR+GL LM DFR+R+
Sbjct: 399 DWEPKVVLRDGLVLMEDDFRERL 467
Score = 103 bits (220), Expect(2) = 2e-028
Identities = 56/90 (62%), Positives = 59/90 (65%)
Frame = -1 / -2
Query: 319 GSMVSWTTLASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVNGS 140
G + S+T ASSSMVNSPG P L GP SP ISFIRP T S T KLLVC P TV S
Sbjct: 313 GLINSFTFSASSSMVNSPGFPMLMGPVLSPFISFIRPLTISAT*QKLLVCVPGFWTVRAS 134
Query: 139 FXSA*ATX*LTTRPSSMHMRGPYVLKIRAI 50
A*A LTTRPSSM + GP VLKI AI
Sbjct: 133 PRMA*AMKLLTTRPSSMFILGP*VLKILAI 44
Score = 42.3 bits (86), Expect(2) = 2e-028
Identities = 22/42 (52%), Positives = 25/42 (59%)
Frame = -1 / -2
Query: 469 RLRKSVTMRGRPSRRGIFGSHPRSSLARPMSGLRLCGSSWVF 344
R RKS +M +PSRR GS R+S A MSG GSS VF
Sbjct: 463 RSRKSSSMSTKPSRRTTLGSQSRTSFAFVMSGFLWRGSSGVF 338
>gb|AJ463159.1|AJ463159 AJ463159 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200085A08F1, mRNA sequence
Length = 420
Score = 208 bits (448), Expect(2) = 1e-055
Identities = 83/100 (83%), Positives = 90/100 (90%)
Frame = +3 / +1
Query: 216 MKLMEGEHVGPFNLGNPGEFTMLELAXVVQDTIDPNARIEFRQNTXDDPHKRKPDIGRAK 395
M+LMEG+H+GPFNLGNPGEFTMLELA VVQDTIDPNARIEFR+NT DDPHKRKPDI +AK
Sbjct: 1 MRLMEGDHIGPFNLGNPGEFTMLELAKVVQDTIDPNARIEFRENTQDDPHKRKPDITKAK 180
Query: 396 ELLGWEPKIPLREGLPLMVTDFRKRIFGDQDTAAATPGNQ 515
E LGWEPKI LR+GLPLMVTDFRKRIFGDQD+AA Q
Sbjct: 181 EQLGWEPKIALRDGLPLMVTDFRKRIFGDQDSAATATEGQ 300
Score = 179 bits (386), Expect(2) = 1e-045
Identities = 77/98 (78%), Positives = 81/98 (82%)
Frame = -1 / -2
Query: 514 WFPGVAAAVSWSPKMRLRKSVTMRGRPSRRGIFGSHPRSSLARPMSGLRLCGSSWVF*RN 335
W AA+SWSP +RLRKSVTMRGRPSRR I GSHP S A +SGLRLCGSSWVF RN
Sbjct: 299 WPSVAVAALSWSPNIRLRKSVTMRGRPSRRAILGSHPSCSFALVISGLRLCGSSWVFSRN 120
Query: 334 SIRALGSMVSWTTLASSSMVNSPGLPRLNGPTCSPSIS 221
SIRA GSMVSWTTLASSSMVNSPGLP+LNGP SPSIS
Sbjct: 119 SIRAFGSMVSWTTLASSSMVNSPGLPKLNGPM*SPSIS 6
Score = 111 bits (237), Expect = 5e-024
Identities = 50/87 (57%), Positives = 58/87 (66%)
Frame = -3 / -1
Query: 476 EDALAEVGDHEGKALAEGDLWLPPKELLGTADXXXXXXXXXXXXLTELDPCVGVDGVLDN 297
E LAEVG+HEG+A+ EGDL LPP+ LL D LTELDP V VDGVLDN
Sbjct: 261 EYPLAEVGNHEGEAVTEGDLGLPPELLLCLGDIWLALVRVVLGVLTELDPRVRVDGVLDN 82
Query: 296 XGKLQHGELAGVAQVKWSYMLAFHQLH 216
G+ QHGEL GVAQV+W ++ FHQ H
Sbjct: 81 LGQFQHGELTGVAQVEWPNVITFHQPH 1
Score = 103 bits (219), Expect(2) = 8e-022
Identities = 44/68 (64%), Positives = 49/68 (72%)
Frame = +2 / +3
Query: 218 EADGRRACRTI*PGQPRRVHHAGACQXCPGHHRPQRTDRVPSEHPXRPTQAQARHRPCQG 397
EADGR + I GQPR VHHAG Q CPGHHRP+R DRVP EHP RP QAQAR+ +G
Sbjct: 3 EADGR*SHWAIQLGQPR*VHHAGTGQGCPGHHRPERADRVP*EHPGRPAQAQARYHQGKG 182
Query: 398 APWVGAKD 421
A VGA+D
Sbjct: 183 ATRVGAQD 206
Score = 29.0 bits (57), Expect(2) = 1e-055
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +2 / +3
Query: 554 FWWPASSCLVG 586
FWWPASS L+G
Sbjct: 333 FWWPASSLLLG 365
Score = 23.5 bits (45), Expect(2) = 1e-045
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -2 / -3
Query: 585 PTKQLEAGHQKF 550
P +LEAGHQ F
Sbjct: 364 PRSKLEAGHQNF 329
Score = 21.7 bits (41), Expect(2) = 8e-022
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +1 / +2
Query: 499 PPPETSKARTEEEHGTWKFLVACF*L 576
PPP ++ ++ LVACF*L
Sbjct: 278 PPPPPKASKE*TGVQYYEILVACF*L 355
>gb|AV914847.1|AV914847 AV914847 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags8i09 5', mRNA sequence
Length = 519
Score = 215 bits (465), Expect = 2e-055
Identities = 90/99 (90%), Positives = 93/99 (93%)
Frame = +3 / +1
Query: 45 VXIARIFNTYGPRMCIDDGRVVS*XVAQALXXEPLTVYGDGKQTRSFQYVSDLVEGLMKL 224
V IARIFNTYGPRMCIDDGRVVS VAQAL EPLTVYGDGKQTRSFQYVSDLVEGLM+L
Sbjct: 223 VRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMRL 402
Query: 225 MEGEHVGPFNLGNPGEFTMLELAXVVQDTIDPNARIEFR 341
MEG+H+GPFNLGNPGEFTMLELA VVQDTIDPNARIEFR
Sbjct: 403 MEGDHIGPFNLGNPGEFTMLELAKVVQDTIDPNARIEFR 519
Score = 192 bits (414), Expect = 2e-048
Identities = 85/99 (85%), Positives = 87/99 (87%)
Frame = -1 / -2
Query: 340 RNSIRALGSMVSWTTLASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPS 161
RNSIRA GSMVSWTTLASSSMVNSPGLP+LNGP SPSIS I PST+SETYWKLLVC PS
Sbjct: 518 RNSIRAFGSMVSWTTLASSSMVNSPGLPKLNGPM*SPSISLINPSTKSETYWKLLVCLPS 339
Query: 160 P*TVNGSFXSA*ATX*LTTRPSSMHMRGPYVLKIRAIXT 44
P*TV GSF SA*AT LTTRPSSMHMRGP VLKIRAI T
Sbjct: 338 P*TVKGSFLSA*ATKLLTTRPSSMHMRGP*VLKIRAILT 222
Score = 161 bits (347), Expect = 3e-039
Identities = 66/98 (67%), Positives = 70/98 (71%)
Frame = -2 / -3
Query: 339 GTRSVRWGRWCPGQXWQAPAW*TRRGCPG*MVLHARLPSASSDPRPDQKHIGNSWFAFHH 160
GTRS R GRWCPGQ W PAW*T RGCP *M LPSASS P+P+QK IGNSW A H
Sbjct: 517 GTRSARSGRWCPGQPWPVPAW*THRGCPS*MAQCDHLPSASSTPQPNQKRIGNSWSACHR 338
Query: 159 HKPSMAXSSVPEQRXN*QHGHRQCTCEGHMC*RYVRS* 46
KPS A S PEQ+ *QHGHRQCTC GH C*R +S*
Sbjct: 337 RKPSKAPSLAPEQQSC*QHGHRQCTCVGHRC*RSEQS* 224
Score = 152 bits (327), Expect = 2e-036
Identities = 63/97 (64%), Positives = 70/97 (72%)
Frame = +2 / +3
Query: 50 DRTYLQHIWPSHVH*RWPCCQLXRCSGTXEXAIDGLW*WKANQEFPICF*SGRGSDEADG 229
D + L H+WP+HVH*RWPCCQ CSG E A DGL W+A+QEFPI F* G G DEADG
Sbjct: 228 DCSDL*HLWPTHVH*RWPCCQQLCCSGAKEGAFDGLRRWQADQEFPIRF*FG*GVDEADG 407
Query: 230 RRACRTI*PGQPRRVHHAGACQXCPGHHRPQRTDRVP 340
R + I GQPR VHHAG Q CPGHHRP+R DRVP
Sbjct: 408 R*SHWAIQLGQPR*VHHAGTGQGCPGHHRPERADRVP 518
Score = 149 bits (319), Expect = 2e-035
Identities = 65/102 (63%), Positives = 78/102 (76%)
Frame = -3 / -1
Query: 341 TELDPCVGVDGVLDNXGKLQHGELAGVAQVKWSYMLAFHQLHQTLDQIRNILETPGLLSI 162
TELDP V VDGVLDN G+ QHGEL GVAQV+W ++ FHQ HQ L+QIRN+LETPGLL+I
Sbjct: 519 TELDPRVRVDGVLDNLGQFQHGELTGVAQVEWPNVITFHQPHQPLNQIRNVLETPGLLAI 340
Query: 161 TINRQWLXXQCLSNXLTDNTAIVNAHARAICVEDTCDXNSRL 36
+NRQ L LSN + DNTAIVNAHA AI V+D + N ++
Sbjct: 339 AVNRQRLLP*RLSNKVADNTAIVNAHAWAIGVKDPSNPNLKV 214
Score = 133 bits (285), Expect = 1e-030
Identities = 63/93 (67%), Positives = 65/93 (69%)
Frame = +1 / +2
Query: 61 SSTHMALACALTMAVLSVXSLLRH*XXSH*RFMVMESKPGVSNMFLIWSRV**S*WKASM 240
S T MA ACALTMAVLS LLR * S *RF M S+PGVSN FLIW R ** *WK
Sbjct: 239 SLTPMAHACALTMAVLSATLLLRR*GRSL*RFTAMASRPGVSNTFLIWLRG**G*WKVIT 418
Query: 241 *DHLTWATPASSPCWSLPXLSRTPSTPTHGSSS 339
H TWATP SSPCW+ P LSRTPST T GSSS
Sbjct: 419 LGHSTWATPVSSPCWNWPRLSRTPSTRTRGSSS 517
>gb|BF258305.2|BF258305 HVSMEf0015F24f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0015F24f, mRNA sequence
Length = 745
Score = 215 bits (464), Expect = 2e-055
Identities = 90/143 (62%), Positives = 109/143 (76%)
Frame = +3 / +2
Query: 45 VXIARIFNTYGPRMCIDDGRVVS*XVAQALXXEPLTVYGDGKQTRSFQYVSDLVEGLMKL 224
+ IARIFNTYGPRM IDDGRVVS +AQA+ E LTV G QTRSF YV+D+V GLMKL
Sbjct: 68 IRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEALTVQKPGTQTRSFCYVADMVNGLMKL 247
Query: 225 MEGEHVGPFNLGNPGEFTMLELAXVVQDTIDPNARIEFRQNTXDDPHKRKPDIGRAKELL 404
M G++ GP N+GNPGEFTMLELA V++ I+P +NT DDP +RKPDI +AKE+L
Sbjct: 248 MNGDNTGPINIGNPGEFTMLELAENVKELINPEVTATMTENTPDDPRQRKPDITKAKEVL 427
Query: 405 GWEPKIPLREGLPLMVTDFRKRI 473
WEPK+ LR+GL LM DFR+R+
Sbjct: 428 DWEPKVVLRDGLVLMEDDFRERL 496
Score = 103 bits (220), Expect(2) = 3e-029
Identities = 56/90 (62%), Positives = 59/90 (65%)
Frame = -1 / -2
Query: 319 GSMVSWTTLASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVNGS 140
G + S+T ASSSMVNSPG P L GP SP ISFIRP T S T KLLVC P TV S
Sbjct: 342 GLINSFTFSASSSMVNSPGFPMLMGPVLSPFISFIRPLTISAT*QKLLVCVPGFWTVRAS 163
Query: 139 FXSA*ATX*LTTRPSSMHMRGPYVLKIRAI 50
A*A LTTRPSSM + GP VLKI AI
Sbjct: 162 PRMA*AMKLLTTRPSSMFILGP*VLKILAI 73
Score = 45.1 bits (92), Expect(2) = 3e-029
Identities = 23/42 (54%), Positives = 26/42 (61%)
Frame = -1 / -2
Query: 469 RLRKSVTMRGRPSRRGIFGSHPRSSLARPMSGLRLCGSSWVF 344
R RKS +M +PSRR FGS R+S A MSG GSS VF
Sbjct: 492 RSRKSSSMSTKPSRRTTFGSQSRTSFAFVMSGFLWRGSSGVF 367
>gb|BE231175.2|BE231175 HVSMEg0017G06f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0017G06f, mRNA sequence
Length = 939
Score = 209 bits (451), Expect = 2e-053
Identities = 87/142 (61%), Positives = 107/142 (75%)
Frame = +3 / +2
Query: 45 VXIARIFNTYGPRMCIDDGRVVS*XVAQALXXEPLTVYGDGKQTRSFQYVSDLVEGLMKL 224
+ IARIFNTYGPRM IDDGRVVS +AQA+ E LTV G QTRSF YV+D+V GLMKL
Sbjct: 188 IRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEALTVQKPGTQTRSFCYVADMVNGLMKL 367
Query: 225 MEGEHVGPFNLGNPGEFTMLELAXVVQDTIDPNARIEFRQNTXDDPHKRKPDIGRAKELL 404
M G++ GP N+GNPGEFTMLELA V++ I+P + +NT DDP ++KPDI +A E+L
Sbjct: 368 MNGDNTGPINIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQKKPDITKAXEVL 547
Query: 405 GWEPKIPLREGLPLMVTDFRKR 470
WEP + LR+GL LM DFR+R
Sbjct: 548 DWEPXVVLRDGLVLMEDDFRER 613
Score = 103 bits (220), Expect(2) = 3e-029
Identities = 56/90 (62%), Positives = 59/90 (65%)
Frame = -1 / -1
Query: 319 GSMVSWTTLASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVNGS 140
G + S+T ASSSMVNSPG P L GP SP ISFIRP T S T KLLVC P TV S
Sbjct: 462 GLINSFTFSASSSMVNSPGFPMLMGPVLSPFISFIRPLTISAT*QKLLVCVPGFWTVRAS 283
Query: 139 FXSA*ATX*LTTRPSSMHMRGPYVLKIRAI 50
A*A LTTRPSSM + GP VLKI AI
Sbjct: 282 PRMA*AMKLLTTRPSSMFILGP*VLKILAI 193
Score = 45.1 bits (92), Expect(2) = 3e-029
Identities = 24/48 (50%), Positives = 27/48 (56%)
Frame = -1 / -1
Query: 487 SWSPKMRLRKSVTMRGRPSRRGIFGSHPRSSLARPMSGLRLCGSSWVF 344
SW R RKS +M +PSRR GS R+S A MSG GSS VF
Sbjct: 630 SWGIPNRSRKSSSMSTKPSRRTTXGSQSRTSXAFVMSGFFWRGSSGVF 487
>gb|AJ463158.1|AJ463158 AJ463158 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200037F02F1, mRNA sequence
Length = 360
Score = 200 bits (432), Expect(2) = 2e-053
Identities = 80/96 (83%), Positives = 86/96 (89%)
Frame = +3 / +3
Query: 228 EGEHVGPFNLGNPGEFTMLELAXVVQDTIDPNARIEFRQNTXDDPHKRKPDIGRAKELLG 407
EG+H+GPFNLGNPGEFTMLELA VVQDTIDPNARIEFR+NT DDPHKRKPDI +AKE LG
Sbjct: 3 EGDHIGPFNLGNPGEFTMLELAKVVQDTIDPNARIEFRENTQDDPHKRKPDITKAKEQLG 182
Query: 408 WEPKIPLREGLPLMVTDFRKRIFGDQDTAAATPGNQ 515
WEPKI LR+GLPLMVTDFRKRIFGDQD+AA Q
Sbjct: 183 WEPKIALRDGLPLMVTDFRKRIFGDQDSAATATEGQ 290
Score = 176 bits (378), Expect(2) = 2e-044
Identities = 75/96 (78%), Positives = 79/96 (82%)
Frame = -1 / -3
Query: 514 WFPGVAAAVSWSPKMRLRKSVTMRGRPSRRGIFGSHPRSSLARPMSGLRLCGSSWVF*RN 335
W AA+SWSP +RLRKSVTMRGRPSRR I GSHP S A +SGLRLCGSSWVF RN
Sbjct: 289 WPSVAVAALSWSPNIRLRKSVTMRGRPSRRAILGSHPSCSFALVISGLRLCGSSWVFSRN 110
Query: 334 SIRALGSMVSWTTLASSSMVNSPGLPRLNGPTCSPS 227
SIRA GSMVSWTTLASSSMVNSPGLP+LNGP SPS
Sbjct: 109 SIRAFGSMVSWTTLASSSMVNSPGLPKLNGPM*SPS 2
Score = 103 bits (219), Expect = 2e-021
Identities = 47/83 (56%), Positives = 55/83 (66%)
Frame = -3 / -2
Query: 476 EDALAEVGDHEGKALAEGDLWLPPKELLGTADXXXXXXXXXXXXLTELDPCVGVDGVLDN 297
E LAEVG+HEG+A+ EGDL LPP+ LL D LTELDP V VDGVLDN
Sbjct: 251 EYPLAEVGNHEGEAVTEGDLGLPPELLLCLGDIWLALVRVVLGVLTELDPRVRVDGVLDN 72
Query: 296 XGKLQHGELAGVAQVKWSYMLAF 228
G+ QHGEL GVAQV+W ++ F
Sbjct: 71 LGQFQHGELTGVAQVEWPNVITF 3
Score = 29.0 bits (57), Expect(2) = 2e-053
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +2 / +2
Query: 554 FWWPASSCLVG 586
FWWPASS L+G
Sbjct: 323 FWWPASSLLLG 355
Score = 23.5 bits (45), Expect(2) = 2e-044
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -2 / -1
Query: 585 PTKQLEAGHQKF 550
P +LEAGHQ F
Sbjct: 354 PRSKLEAGHQNF 319
>gb|BF254210.3|BF254210 HVSMEf0003F07f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0003F07f, mRNA sequence
Length = 828
Score = 208 bits (449), Expect = 3e-053
Identities = 88/143 (61%), Positives = 107/143 (74%)
Frame = +3 / +2
Query: 45 VXIARIFNTYGPRMCIDDGRVVS*XVAQALXXEPLTVYGDGKQTRSFQYVSDLVEGLMKL 224
+ IARIFNTYGPRM IDDGRVVS +AQA+ E LTV G QTRSF YV+D+V GLMKL
Sbjct: 107 IRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEALTVQKPGTQTRSFCYVADMVNGLMKL 286
Query: 225 MEGEHVGPFNLGNPGEFTMLELAXVVQDTIDPNARIEFRQNTXDDPHKRKPDIGRAKELL 404
M G++ GP N+GNPGEFTMLELA V++ I+P + +NT DDP +RKPD+ +AKE+L
Sbjct: 287 MNGDNTGPINIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKPDMTKAKEVL 466
Query: 405 GWEPKIPLREGLPLMVTDFRKRI 473
WEPK LR+G LM D RKR+
Sbjct: 467 DWEPKDRLRDG*VLMDDDLRKRV 535
Score = 103 bits (220), Expect(2) = 2e-026
Identities = 56/90 (62%), Positives = 59/90 (65%)
Frame = -1 / -1
Query: 319 GSMVSWTTLASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVNGS 140
G + S+T ASSSMVNSPG P L GP SP ISFIRP T S T KLLVC P TV S
Sbjct: 381 GLINSFTFSASSSMVNSPGFPMLMGPVLSPFISFIRPLTISAT*QKLLVCVPGFWTVRAS 202
Query: 139 FXSA*ATX*LTTRPSSMHMRGPYVLKIRAI 50
A*A LTTRPSSM + GP VLKI AI
Sbjct: 201 PRMA*AMKLLTTRPSSMFILGP*VLKILAI 112
Score = 35.4 bits (71), Expect(2) = 2e-026
Identities = 20/42 (47%), Positives = 23/42 (54%)
Frame = -1 / -1
Query: 469 RLRKSVTMRGRPSRRGIFGSHPRSSLARPMSGLRLCGSSWVF 344
R RKS ++ PSR GS R+S A MSG GSS VF
Sbjct: 531 RFRKSSSISTYPSRSLSLGSQSRTSFAFVMSGFLWRGSSGVF 406
>gb|BE455469.2|BE455469 HVSMEg0017F01f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0017F01f, mRNA sequence
Length = 588
Score = 207 bits (446), Expect = 7e-053
Identities = 84/94 (89%), Positives = 86/94 (91%)
Frame = +3 / +2
Query: 204 VEGLMKLMEGEHVGPFNLGNPGEFTMLELAXVVQDTIDPNARIEFRQNTXDDPHKRKPDI 383
VEGLMKLMEGEHVGPFNLGNPGEFTMLELA VVQDTIDPNARIEFR NT DDPHKRKPDI
Sbjct: 257 VEGLMKLMEGEHVGPFNLGNPGEFTMLELAKVVQDTIDPNARIEFRANTADDPHKRKPDI 436
Query: 384 GRAKELLGWEPKIPLREGLPLMVTDFRKRIFGDQ 485
+AKELLGWEPK+ LR GLPLMV DFR RIFGDQ
Sbjct: 437 TKAKELLGWEPKVALRNGLPLMVQDFRTRIFGDQ 538
Score = 168 bits (362), Expect = 3e-041
Identities = 75/94 (79%), Positives = 77/94 (81%)
Frame = -1 / -1
Query: 484 WSPKMRLRKSVTMRGRPSRRGIFGSHPRSSLARPMSGLRLCGSSWVF*RNSIRALGSMVS 305
WSPKMR+RKS TM GRP R GSHP SSLA MSGLRLCGSS V RNSI ALGSMVS
Sbjct: 537 WSPKMRVRKSWTMSGRPFRSATLGSHPSSSLALVMSGLRLCGSSAVLARNSILALGSMVS 358
Query: 304 WTTLASSSMVNSPGLPRLNGPTCSPSISFIRPST 203
TTLASSS+VNSPG PRLNGPTCSPSISFI PST
Sbjct: 357 CTTLASSSIVNSPGFPRLNGPTCSPSISFISPST 256
Score = 100 bits (214), Expect = 7e-021
Identities = 47/91 (51%), Positives = 57/91 (62%)
Frame = -3 / -3
Query: 476 EDALAEVGDHEGKALAEGDLWLPPKELLGTADXXXXXXXXXXXXLTELDPCVGVDGVLDN 297
EDA AEV DHE +A+ E L LPP++LLG D ELDPCVGVDGVL +
Sbjct: 529 EDAGAEVLDHEREAVPERHLGLPPEQLLGLGDVRLALVRVVGGVGPELDPCVGVDGVLHH 350
Query: 296 XGKLQHGELAGVAQVKWSYMLAFHQLHQTLD 204
G+LQH EL V QV+ ++L HQLHQ L+
Sbjct: 349 LGQLQHRELPRVPQVERPHVLPLHQLHQPLN 257
>gb|BJ454281.1|BJ454281 BJ454281 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak46n15 5', mRNA sequence
Length = 614
Score = 207 bits (446), Expect = 7e-053
Identities = 86/135 (63%), Positives = 104/135 (77%)
Frame = +3 / +3
Query: 45 VXIARIFNTYGPRMCIDDGRVVS*XVAQALXXEPLTVYGDGKQTRSFQYVSDLVEGLMKL 224
+ IARIFNTYGPRM IDDGRVVS +AQA+ E LTV G QTRSF YV+D+V GLMKL
Sbjct: 204 IRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEALTVQKPGTQTRSFCYVADMVNGLMKL 383
Query: 225 MEGEHVGPFNLGNPGEFTMLELAXVVQDTIDPNARIEFRQNTXDDPHKRKPDIGRAKELL 404
M G++ GP N+GNPGEFTMLELA V++ I+P + +NT DDP +RKPDI +AKE+L
Sbjct: 384 MNGDNTGPINIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEVL 563
Query: 405 GWEPKIPLREGLPLM 449
WEPK+ LR+GL LM
Sbjct: 564 DWEPKVVLRDGLVLM 608
Score = 103 bits (220), Expect(2) = 2e-026
Identities = 56/90 (62%), Positives = 59/90 (65%)
Frame = -1 / -2
Query: 319 GSMVSWTTLASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVNGS 140
G + S+T ASSSMVNSPG P L GP SP ISFIRP T S T KLLVC P TV S
Sbjct: 478 GLINSFTFSASSSMVNSPGFPMLMGPVLSPFISFIRPLTISAT*QKLLVCVPGFWTVRAS 299
Query: 139 FXSA*ATX*LTTRPSSMHMRGPYVLKIRAI 50
A*A LTTRPSSM + GP VLKI AI
Sbjct: 298 PRMA*AMKLLTTRPSSMFILGP*VLKILAI 209
Score = 35.4 bits (71), Expect(2) = 2e-026
Identities = 18/36 (50%), Positives = 21/36 (58%)
Frame = -1 / -2
Query: 451 TMRGRPSRRGIFGSHPRSSLARPMSGLRLCGSSWVF 344
+M +PSRR GS R+S A MSG GSS VF
Sbjct: 610 SMSTKPSRRTTLGSQSRTSFAFVMSGFLWRGSSGVF 503
>gb|BJ466302.1|BJ466302 BJ466302 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags31i13 3', mRNA sequence
Length = 582
Score = 206 bits (444), Expect = 1e-052
Identities = 86/138 (62%), Positives = 105/138 (76%)
Frame = +3 / -2
Query: 60 IFNTYGPRMCIDDGRVVS*XVAQALXXEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEH 239
IFNTYG RM IDDGRVVS +AQA+ E LTV G QTRSF YV+D+V GLMKLM G++
Sbjct: 578 IFNTYGXRMNIDDGRVVSNFIAQAIRGEALTVQKPGTQTRSFCYVADMVNGLMKLMNGDN 399
Query: 240 VGPFNLGNPGEFTMLELAXVVQDTIDPNARIEFRQNTXDDPHKRKPDIGRAKELLGWEPK 419
GP N+GNPGEFTMLELA V++ I+P + +NT DDP +RKPDI +AKE+L WEPK
Sbjct: 398 TGPINIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPK 219
Query: 420 IPLREGLPLMVTDFRKRI 473
+ LR+GL LM DFR+R+
Sbjct: 218 VVLRDGLVLMEDDFRERL 165
Score = 95.9 bits (203), Expect(2) = 3e-026
Identities = 52/86 (60%), Positives = 55/86 (63%)
Frame = -1 / +1
Query: 319 GSMVSWTTLASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVNGS 140
G + S+T ASSSMVNSPG P L GP SP ISFIRP T S T KLLVC P TV S
Sbjct: 319 GLINSFTFSASSSMVNSPGFPMLMGPVLSPFISFIRPLTISAT*QKLLVCVPGFWTVRAS 498
Query: 139 FXSA*ATX*LTTRPSSMHMRGPYVLK 62
A*A LTTRPSSM + P VLK
Sbjct: 499 PRMA*AMKLLTTRPSSMFILXP*VLK 576
Score = 42.3 bits (86), Expect(2) = 3e-026
Identities = 22/42 (52%), Positives = 25/42 (59%)
Frame = -1 / +1
Query: 469 RLRKSVTMRGRPSRRGIFGSHPRSSLARPMSGLRLCGSSWVF 344
R RKS +M +PSRR GS R+S A MSG GSS VF
Sbjct: 169 RSRKSSSMSTKPSRRTTLGSQSRTSFAFVMSGFLWRGSSGVF 294
>gb|AV936421.1|AV936421 AV936421 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal11e02 3', mRNA sequence
Length = 647
Score = 193 bits (417), Expect(2) = 4e-052
Identities = 76/101 (75%), Positives = 88/101 (87%)
Frame = +3 / -2
Query: 180 SFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAXVVQDTIDPNARIEFRQNTXDD 359
SFQYVSDLV GLM LME +H+GPFNLGNPGEFTMLELA VV++TIDP + IEF+ NT DD
Sbjct: 601 SFQYVSDLVAGLMALMESDHIGPFNLGNPGEFTMLELAEVVKETIDPMSTIEFKPNTADD 422
Query: 360 PHKRKPDIGRAKELLGWEPKIPLREGLPLMVTDFRKRIFGD 482
PH RKPDI +AK++LGWEPK+ L+EGLPLMVTDFRKRI +
Sbjct: 421 PHMRKPDITKAKQMLGWEPKVSLKEGLPLMVTDFRKRILDE 299
Score = 123 bits (263), Expect(2) = 2e-028
Identities = 61/108 (56%), Positives = 73/108 (67%)
Frame = -1 / +3
Query: 490 VSWSPKMRLRKSVTMRGRPSRRGIFGSHPRSSLARPMSGLRLCGSSWVF*RNSIRALGSM 311
+ +S K+ LRKSVT++GRPS R FGS P A +SG + GSS V NSI +GS+
Sbjct: 291 LDYSSKILLRKSVTIKGRPSLRDTFGSQPSICFALVISGFLIWGSSAVLGLNSIVDIGSI 470
Query: 310 VSWTTLASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCF 167
VS+TT ASS+MVNSPG PRL GP S SI I P+TRSETY KL F
Sbjct: 471 VSFTTSASSNMVNSPGFPRLKGPI*SLSIRAINPATRSETY*KLSSLF 614
Score = 31.3 bits (62), Expect(2) = 4e-052
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = +3 / -1
Query: 147 LTVYGDGKQTRSF 185
+TVYGDGKQTR F
Sbjct: 635 MTVYGDGKQTRKF 597
Score = 22.1 bits (42), Expect(2) = 2e-028
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -1 / +1
Query: 175 VCFPSP*TV 149
VCFPSP TV
Sbjct: 607 VCFPSPYTV 633
>gb|AV909659.1|AV909659 AV909659 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak13i23 5', mRNA sequence
Length = 521
Score = 122 bits (262), Expect(4) = 1e-051
Identities = 47/55 (85%), Positives = 52/55 (94%)
Frame = +3 / +1
Query: 231 GEHVGPFNLGNPGEFTMLELAXVVQDTIDPNARIEFRQNTXDDPHKRKPDIGRAK 395
G+H+GPFNLGNPGEFTMLELA VVQDTIDPNARIEFR+NT DDPHKRKPDI +A+
Sbjct: 43 GDHIGPFNLGNPGEFTMLELAKVVQDTIDPNARIEFRENTQDDPHKRKPDITKAQ 207
Score = 108 bits (230), Expect(5) = 1e-043
Identities = 45/51 (88%), Positives = 47/51 (92%)
Frame = -1 / -1
Query: 382 MSGLRLCGSSWVF*RNSIRALGSMVSWTTLASSSMVNSPGLPRLNGPTCSP 230
+SGLRLCGSSWVF RNSIRA GSMVSWTTLASSSMVNSPGLP+LNGP SP
Sbjct: 194 ISGLRLCGSSWVFSRNSIRAFGSMVSWTTLASSSMVNSPGLPKLNGPM*SP 42
Score = 85.8 bits (181), Expect(4) = 1e-022
Identities = 32/42 (76%), Positives = 34/42 (80%)
Frame = +2 / +3
Query: 257 GQPRRVHHAGACQXCPGHHRPQRTDRVPSEHPXRPTQAQARH 382
GQPR VHHAG Q CPGHHRP+R DRVP EHP RP QAQAR+
Sbjct: 69 GQPR*VHHAGTGQGCPGHHRPERADRVP*EHPGRPAQAQARY 194
Score = 80.3 bits (169), Expect(4) = 1e-051
Identities = 33/43 (76%), Positives = 35/43 (81%)
Frame = +3 / +2
Query: 387 RAKELLGWEPKIPLREGLPLMVTDFRKRIFGDQDTAAATPGNQ 515
R KE LGWEPKI LR+GLPLMVTDFRKRIFGDQD+AA Q
Sbjct: 200 RHKEQLGWEPKIALRDGLPLMVTDFRKRIFGDQDSAATATEGQ 328
Score = 70.7 bits (148), Expect(5) = 1e-043
Identities = 29/41 (70%), Positives = 31/41 (75%)
Frame = -1 / -3
Query: 514 WFPGVAAAVSWSPKMRLRKSVTMRGRPSRRGIFGSHPRSSL 392
W AA+SWSP +RLRKSVTMRGRPSRR I GSHP SL
Sbjct: 327 WPSVAVAALSWSPNIRLRKSVTMRGRPSRRAILGSHPSCSL 205
Score = 68.4 bits (143), Expect(3) = 3e-021
Identities = 25/33 (75%), Positives = 25/33 (75%)
Frame = -2 / -2
Query: 345 SDGTRSVRWGRWCPGQXWQAPAW*TRRGCPG*M 247
S GTRS R GRWCPGQ W PAW*T RGCP *M
Sbjct: 157 SHGTRSARSGRWCPGQPWPVPAW*THRGCPS*M 59
Score = 47.3 bits (97), Expect(3) = 3e-021
Identities = 20/28 (71%), Positives = 23/28 (82%)
Frame = -3 / -2
Query: 476 EDALAEVGDHEGKALAEGDLWLPPKELL 393
E LAEVG+HEG+A+ EGDL LPPK LL
Sbjct: 289 EYPLAEVGNHEGEAVTEGDLGLPPKLLL 206
Score = 28.6 bits (56), Expect(4) = 1e-051
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +2 / +1
Query: 554 FWWPASSCLVG 586
FWWPASS L+G
Sbjct: 361 FWWPASSFLLG 393
Score = 28.6 bits (56), Expect(4) = 1e-022
Identities = 14/25 (56%), Positives = 15/25 (60%)
Frame = +3 / +3
Query: 192 VSDLVEGLMKLMEGEHVGPFNLGNP 266
VSDLVEGLM+LM LG P
Sbjct: 3 VSDLVEGLMRLMXR*SHWAIQLGQP 77
Score = 28.1 bits (55), Expect(4) = 1e-051
Identities = 8/12 (66%), Positives = 12/12 (100%)
Frame = +2 / +2
Query: 644 EIPWLML*CYSF 679
++PWL++*CYSF
Sbjct: 452 KLPWLLV*CYSF 487
Score = 26.7 bits (52), Expect(4) = 1e-022
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = +1 / +3
Query: 394 RSSLGGSQRSPSARA 438
RS+LGGS RSPS A
Sbjct: 207 RSNLGGSPRSPSVTA 251
Score = 24.9 bits (48), Expect(5) = 1e-043
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = -2 / -3
Query: 228 PSASSDPRPDQK 193
PSASS P+P+QK
Sbjct: 39 PSASSTPQPNQK 4
Score = 24.4 bits (47), Expect(5) = 1e-043
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = -2 / -1
Query: 585 PTKQLEAGHQKF 550
P ++LEAGHQ F
Sbjct: 392 PRRKLEAGHQNF 357
Score = 23.1 bits (44), Expect(3) = 3e-021
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -1 / -2
Query: 226 ISFIRPSTRSET 191
IS I PST+SET
Sbjct: 37 ISLINPSTKSET 2
Score = 22.1 bits (42), Expect(5) = 1e-043
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = -2 / -3
Query: 681 EKE*HYSINQG 649
+KE*HY+ NQG
Sbjct: 489 KKE*HYTNNQG 457
Score = 21.7 bits (41), Expect(4) = 1e-022
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +1 / +3
Query: 499 PPPETSKARTEEEHGTWKFLVACF*L 576
PPP ++ ++ LVACF*L
Sbjct: 306 PPPPPKASKE*TGVQYYEILVACF*L 383
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 428,657,839
Number of Sequences: 312970
Number of extensions: 8328568
Number of successful extensions: 108490
Number of sequences better than 1.0e-020: 197
length of database: 58,378,179
effective HSP length: 52
effective length of database: 42,103,739
effective search space used: 9052303885
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)