TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3012873.2.2
(1520 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BG301229.1|BG301229 HVSMEb0020B01f Hordeum vulgare seedl... 384 e-117
gb|BG344152.2|BG344152 HVSMEg0007N17f Hordeum vulgare pre-a... 394 e-109
gb|BI960557.1|BI960557 HVSMEn0025A09f Hordeum vulgare rachi... 388 e-107
gb|BI958105.1|BI958105 HVSMEn0013G15f Hordeum vulgare rachi... 385 e-106
gb|BQ763369.1|BQ763369 EBro02_SQ008_J04_R root, 3 week, hyd... 261 2e-093
gb|BI960699.1|BI960699 HVSMEn0025O19f Hordeum vulgare rachi... 336 1e-091
gb|BF263685.3|BF263685 HV_CEa0007G08f Hordeum vulgare seedl... 334 7e-091
gb|BI958862.1|BI958862 HVSMEn0016O20f Hordeum vulgare rachi... 333 1e-090
gb|BQ766677.1|BQ766677 EBro08_SQ006_F23_R root, 3 week, dro... 160 1e-081
gb|BI959031.1|BI959031 HVSMEn0017M21f Hordeum vulgare rachi... 303 2e-081
gb|BI957284.1|BI957284 HVSMEn0008K05f Hordeum vulgare rachi... 292 2e-078
gb|BI958488.1|BI958488 HVSMEn0015E11f Hordeum vulgare rachi... 224 1e-072
gb|AL505019.1|AL505019 AL505019 Hordeum vulgare Barke roots... 198 3e-072
gb|BI956546.1|BI956546 HVSMEn0004B08f Hordeum vulgare rachi... 188 7e-072
gb|BQ763022.1|BQ763022 EBro02_SQ006_M20_R root, 3 week, hyd... 127 1e-067
gb|AL503986.1|AL503986 AL503986 Hordeum vulgare Barke roots... 198 1e-065
gb|BQ763205.1|BQ763205 EBro02_SQ007_F14_R root, 3 week, hyd... 239 3e-065
gb|BI777845.2|BI777845 EBro08_SQ002_E16_R root, 3 week, dro... 186 1e-064
gb|BJ450530.1|BJ450530 BJ450530 K. Sato unpublished cDNA li... 247 2e-064
gb|BI959591.1|BI959591 HVSMEn0020F03f Hordeum vulgare rachi... 246 3e-064
gb|BG369168.1|BG369168 HVSMEi0022M03f Hordeum vulgare 20 DA... 193 1e-063
gb|BI957975.1|BI957975 HVSMEn0012L23f Hordeum vulgare rachi... 243 2e-063
gb|BF263684.3|BF263684 HV_CEa0007G07f Hordeum vulgare seedl... 242 4e-063
gb|BM375203.2|BM375203 EBem06_SQ002_K13_R embryo, 21 DPA, n... 117 3e-057
gb|BU975402.1|BU975402 HB31A09r BC Hordeum vulgare subsp. v... 134 2e-053
gb|BU975696.1|BU975696 HB32A09r BC Hordeum vulgare subsp. v... 134 2e-053
gb|CA014495.1|CA014495 HT11I05r HT Hordeum vulgare subsp. v... 139 3e-053
gb|BM816674.1|BM816674 HB01C06_T3.ab1 HB Hordeum vulgare su... 79 5e-052
gb|BI958460.1|BI958460 HVSMEn0015C07f Hordeum vulgare rachi... 158 1e-051
gb|BQ464700.1|BQ464700 HU01A05T HU Hordeum vulgare subsp. v... 139 1e-051
gb|BF254781.2|BF254781 HVSMEf0005A11f Hordeum vulgare seedl... 203 3e-051
gb|BI950770.1|BI950770 HVSMEl0023C06f Hordeum vulgare spike... 193 1e-050
gb|BQ763026.1|BQ763026 EBro02_SQ006_N19_R root, 3 week, hyd... 87 2e-050
gb|BE230902.1|BE230902 HVSMEg0001E18f Hordeum vulgare pre-a... 133 1e-049
gb|BG344412.1|BG344412 HVSMEg0009D04f Hordeum vulgare pre-a... 179 9e-047
gb|BQ767762.1|BQ767762 EBro08_SQ009_D21 _R root, 3 week, dr... 178 8e-044
gb|BG365391.1|BG365391 HVSMEi0002I06f Hordeum vulgare 20 DA... 134 9e-044
gb|CA015399.1|CA015399 HT14D04r HT Hordeum vulgare subsp. v... 139 1e-043
gb|CA006616.1|CA006616 HU05D06r HU Hordeum vulgare subsp. v... 100 5e-043
gb|BE196376.3|BE196376 HVSMEh0092C03f Hordeum vulgare 5-45 ... 137 6e-043
gb|BF255832.2|BF255832 HVSMEf0007P02f Hordeum vulgare seedl... 79 1e-042
gb|BU986537.1|BU986537 HF12C17r HF Hordeum vulgare subsp. v... 79 2e-042
gb|BQ470739.1|BQ470739 HX03O06r HX Hordeum vulgare subsp. v... 79 2e-042
gb|AW982651.2|AW982651 HVSMEg0003N13f Hordeum vulgare pre-a... 78 5e-042
gb|BU996119.1|BU996119 HM12I01r HM Hordeum vulgare subsp. v... 159 9e-042
gb|BJ468735.1|BJ468735 BJ468735 K. Sato unpublished cDNA li... 128 1e-041
gb|AL505150.1|AL505150 AL505150 Hordeum vulgare Barke roots... 78 1e-041
gb|BQ467242.1|BQ467242 HS03C04r HS Hordeum vulgare subsp. v... 139 3e-041
gb|BE196379.3|BE196379 HVSMEh0092C06f Hordeum vulgare 5-45 ... 75 8e-041
gb|BE559021.2|BE559021 HV_CEb0022F12f Hordeum vulgare seedl... 105 8e-041
gb|CA032017.1|CA032017 HX11M09r HX Hordeum vulgare subsp. v... 101 1e-040
gb|BQ465481.1|BQ465481 HU03M08r HU Hordeum vulgare subsp. v... 97 2e-040
gb|BF066116.1|BF066116 HV_CEb0014O07f Hordeum vulgare seedl... 133 3e-040
gb|BF066138.1|BF066138 HV_CEb0014P07f Hordeum vulgare seedl... 133 3e-040
gb|AV934049.1|AV934049 AV934049 K. Sato unpublished cDNA li... 73 1e-039
gb|BG310404.1|BG310404 HVSMEc0018H08f Hordeum vulgare seedl... 151 2e-039
gb|BQ467661.1|BQ467661 HS04H17r HS Hordeum vulgare subsp. v... 131 2e-039
gb|BJ463463.1|BJ463463 BJ463463 K. Sato unpublished cDNA li... 105 2e-039
gb|BJ464137.1|BJ464137 BJ464137 K. Sato unpublished cDNA li... 105 2e-039
gb|AL506722.1|AL506722 AL506722 Hordeum vulgare Barke devel... 105 2e-039
gb|AV915311.1|AV915311 AV915311 K. Sato unpublished cDNA li... 105 2e-039
gb|CA031581.1|CA031581 HX10G17r HX Hordeum vulgare subsp. v... 101 6e-039
gb|CA007645.1|CA007645 HU08J12r HU Hordeum vulgare subsp. v... 105 2e-038
gb|BM442873.2|BM442873 EBro02_SQ001_K13_R root, 3 week, hyd... 87 2e-038
gb|BI958620.1|BI958620 HVSMEn0015P02f Hordeum vulgare rachi... 160 2e-038
gb|AV929667.1|AV929667 AV929667 K. Sato unpublished cDNA li... 160 2e-038
gb|AV930574.1|AV930574 AV930574 K. Sato unpublished cDNA li... 160 2e-038
gb|BE602876.2|BE602876 HVSMEh0100H17f Hordeum vulgare 5-45 ... 105 1e-037
gb|AV913567.1|AV913567 AV913567 K. Sato unpublished cDNA li... 75 1e-037
gb|AV926665.1|AV926665 AV926665 K. Sato unpublished cDNA li... 75 1e-037
gb|BQ460124.1|BQ460124 HA07C19r HA Hordeum vulgare subsp. v... 75 2e-037
gb|BU986380.1|BU986380 HF11K09r HF Hordeum vulgare subsp. v... 75 2e-037
gb|BQ467571.1|BQ467571 HS04D07r HS Hordeum vulgare subsp. v... 75 2e-037
gb|AV914608.1|AV914608 AV914608 K. Sato unpublished cDNA li... 105 3e-037
gb|BE456124.3|BE456124 HVSMEg0019N22f Hordeum vulgare pre-a... 64 3e-037
gb|BF253936.2|BF253936 HVSMEf0002I16f Hordeum vulgare seedl... 75 5e-037
gb|CV054175.1|CV054175 BNEL107f1 Barley EST endosperm libra... 97 9e-037
gb|AV931426.1|AV931426 AV931426 K. Sato unpublished cDNA li... 154 2e-036
gb|AV934152.1|AV934152 AV934152 K. Sato unpublished cDNA li... 73 2e-036
gb|BU973416.1|BU973416 HB24O01r BC Hordeum vulgare subsp. v... 72 2e-036
gb|BQ464838.1|BQ464838 HU01M14T HU Hordeum vulgare subsp. v... 139 3e-036
gb|CV063066.1|CV063066 BNEL86c3 Barley EST endosperm librar... 97 3e-036
gb|CA001150.1|CA001150 HS05E05u HS Hordeum vulgare subsp. v... 151 8e-036
gb|AV925423.1|AV925423 AV925423 K. Sato unpublished cDNA li... 144 1e-035
gb|BJ457952.1|BJ457952 BJ457952 K. Sato unpublished cDNA li... 150 2e-035
gb|CA000262.1|CA000262 HS09C23u HS Hordeum vulgare subsp. v... 149 5e-035
gb|AV913390.1|AV913390 AV913390 K. Sato unpublished cDNA li... 105 5e-035
gb|BE060930.3|BE060930 HVSMEg0013N24f Hordeum vulgare pre-a... 64 9e-035
gb|CV063107.1|CV063107 BNEL86g1 Barley EST endosperm librar... 92 9e-035
gb|BJ544054.1|BJ544054 BJ544054 K. Sato unpublished cDNA li... 73 1e-034
gb|BJ464456.1|BJ464456 BJ464456 K. Sato unpublished cDNA li... 72 1e-034
gb|BJ452084.1|BJ452084 BJ452084 K. Sato unpublished cDNA li... 95 2e-034
gb|BI955632.1|BI955632 HVSMEm0023N15f Hordeum vulgare green... 69 2e-034
gb|BI957282.1|BI957282 HVSMEn0008K03f Hordeum vulgare rachi... 127 2e-034
gb|BE214157.3|BE214157 HV_CEb0002H13f Hordeum vulgare seedl... 86 2e-033
gb|CA020126.1|CA020126 HV14G15r HV Hordeum vulgare subsp. v... 75 2e-033
gb|AW983188.3|AW983188 HVSMEg0008J14f Hordeum vulgare pre-a... 113 2e-033
gb|AV836450.1|AV836450 AV836450 K. Sato unpublished cDNA li... 71 2e-033
gb|AV913397.1|AV913397 AV913397 K. Sato unpublished cDNA li... 105 3e-033
gb|CA027702.1|CA027702 HZ59M02r HZ Hordeum vulgare subsp. v... 103 6e-033
gb|AL507080.1|AL507080 AL507080 Hordeum vulgare Barke devel... 70 1e-032
gb|CA022672.1|CA022672 HZ44A09r HZ Hordeum vulgare subsp. v... 70 1e-032
gb|CA021688.1|CA021688 HZ40M24r HZ Hordeum vulgare subsp. v... 70 1e-032
gb|CA026014.1|CA026014 HZ53N10r HZ Hordeum vulgare subsp. v... 70 1e-032
gb|CA024529.1|CA024529 HZ49J01r HZ Hordeum vulgare subsp. v... 70 1e-032
gb|CA025466.1|CA025466 HZ52D24r HZ Hordeum vulgare subsp. v... 70 1e-032
gb|CA028522.1|CA028522 HZ62E15r HZ Hordeum vulgare subsp. v... 70 1e-032
gb|BE215014.1|BE215014 HV_CEb0005I17f Hordeum vulgare seedl... 105 2e-032
gb|CA006217.1|CA006217 HU05D06u HU Hordeum vulgare subsp. v... 116 3e-032
gb|BM097482.2|BM097482 EBro05_SQ003_L07_R root, 3 week, red... 139 3e-032
gb|CA007861.1|CA007861 HU09D12r HU Hordeum vulgare subsp. v... 139 3e-032
gb|CA019777.1|CA019777 HV13C06r HV Hordeum vulgare subsp. v... 89 4e-032
gb|CA001675.1|CA001675 HS05E05r HS Hordeum vulgare subsp. v... 139 4e-032
gb|BQ463596.1|BQ463596 HI05N09r HI Hordeum vulgare subsp. v... 70 9e-032
gb|BQ663162.1|BQ663162 HU01A05w HU Hordeum vulgare subsp. v... 116 1e-031
gb|BQ663264.1|BQ663264 HU01M14w HU Hordeum vulgare subsp. v... 116 1e-031
gb|CA010747.1|CA010747 HT08M24u HT Hordeum vulgare subsp. v... 116 1e-031
gb|CA000392.1|CA000392 HS08M20u HS Hordeum vulgare subsp. v... 116 1e-031
gb|CA028585.1|CA028585 HZ62I09r HZ Hordeum vulgare subsp. v... 70 2e-031
gb|BI776330.2|BI776330 EBem04_SQ001_K08_R embryo, 12 DPA, n... 79 2e-031
gb|BI948507.1|BI948507 HVSMEl0009O08f Hordeum vulgare spike... 128 3e-031
gb|CA013550.1|CA013550 HT08M24r HT Hordeum vulgare subsp. v... 116 3e-031
gb|CA004585.1|CA004585 HS18B01r HS Hordeum vulgare subsp. v... 135 5e-031
gb|BU989665.1|BU989665 HF22F21r HF Hordeum vulgare subsp. v... 79 6e-031
gb|BU985911.1|BU985911 HF08P24r HF Hordeum vulgare subsp. v... 101 2e-030
gb|BF259786.2|BF259786 HVSMEf0020E05f Hordeum vulgare seedl... 72 2e-030
gb|CA015542.1|CA015542 HT14K06r HT Hordeum vulgare subsp. v... 68 2e-030
gb|BF265665.2|BF265665 HV_CEa0013A06f Hordeum vulgare seedl... 73 3e-030
gb|BI958316.1|BI958316 HVSMEn0014G04f Hordeum vulgare rachi... 75 3e-030
gb|BF064595.2|BF064595 HV_CEb0016A19f Hordeum vulgare seedl... 132 6e-030
gb|CA011608.1|CA011608 HT03A12r HT Hordeum vulgare subsp. v... 105 8e-030
gb|BE519901.1|BE519901 HV_CEb0021K08f Hordeum vulgare seedl... 71 9e-030
gb|AV936403.1|AV936403 AV936403 K. Sato unpublished cDNA li... 93 9e-030
gb|AL508824.1|AL508824 AL508824 Hordeum vulgare Barke devel... 71 9e-030
gb|BU980008.1|BU980008 HA18D04r HA Hordeum vulgare subsp. v... 121 1e-029
gb|CA003151.1|CA003151 HS09J04r HS Hordeum vulgare subsp. v... 121 1e-029
gb|BE214863.2|BE214863 HV_CEb0004O14f Hordeum vulgare seedl... 131 1e-029
gb|CV057862.1|CV057862 BNEL31f4 Barley EST endosperm librar... 97 4e-029
gb|AV936300.1|AV936300 AV936300 K. Sato unpublished cDNA li... 93 7e-029
gb|BM369883.2|BM369883 EBem07_SQ004_O04_R embryo, 28 DPA, n... 102 7e-029
gb|BF628107.2|BF628107 HVSMEb0003C11f Hordeum vulgare seedl... 75 8e-029
gb|CA022119.1|CA022119 HZ42D14r HZ Hordeum vulgare subsp. v... 69 2e-028
gb|BE454559.2|BE454559 HVSMEh0094E03f Hordeum vulgare 5-45 ... 73 2e-028
gb|CA023572.1|CA023572 HZ46L02r HZ Hordeum vulgare subsp. v... 104 2e-028
gb|AV936413.1|AV936413 AV936413 K. Sato unpublished cDNA li... 93 3e-028
gb|BU987846.1|BU987846 HF15O20r HF Hordeum vulgare subsp. v... 81 5e-028
gb|CA007077.1|CA007077 HU06K19r HU Hordeum vulgare subsp. v... 95 6e-028
gb|CA020044.1|CA020044 HV14C19r HV Hordeum vulgare subsp. v... 96 1e-027
gb|BI957985.1|BI957985 HVSMEn0012J23f Hordeum vulgare rachi... 124 1e-027
gb|BG343487.1|BG343487 HVSMEg0005O08f Hordeum vulgare pre-a... 61 2e-027
gb|BM444997.2|BM444997 EBem09_SQ007_C03_R embryo, 1 Day ger... 122 4e-027
gb|BE215940.1|BE215940 HV_CEb0008O10f Hordeum vulgare seedl... 69 6e-027
gb|BI960410.1|BI960410 HVSMEn0024I04f Hordeum vulgare rachi... 103 8e-027
gb|AV911222.1|AV911222 AV911222 K. Sato unpublished cDNA li... 93 1e-026
gb|CK122370.1|CK122370 BES1824103a12 BES1824 Hordeum vulgar... 99 1e-026
gb|BJ457744.1|BJ457744 BJ457744 K. Sato unpublished cDNA li... 71 2e-026
gb|AL450961.1|AL450961 AL450961 Hordeum vulgare Barke etiol... 52 2e-026
gb|BE195648.3|BE195648 HVSMEh0090A21f Hordeum vulgare 5-45 ... 71 4e-026
gb|BJ469082.1|BJ469082 BJ469082 K. Sato unpublished cDNA li... 91 8e-026
gb|BF626636.3|BF626636 HVSMEa0018P10f Hordeum vulgare seedl... 70 2e-025
gb|BG299416.1|BG299416 HVSMEa0019O06f Hordeum vulgare seedl... 69 4e-025
gb|CA001406.1|CA001406 HS18B01u HS Hordeum vulgare subsp. v... 116 4e-025
gb|BQ459797.1|BQ459797 HA08A23r HA Hordeum vulgare subsp. v... 75 2e-024
gb|CA002692.1|CA002692 HS08E02r HS Hordeum vulgare subsp. v... 75 2e-024
gb|CA004617.1|CA004617 HS18C15r HS Hordeum vulgare subsp. v... 75 2e-024
gb|CA021911.1|CA021911 HZ41I09r HZ Hordeum vulgare subsp. v... 75 2e-024
gb|BU980158.1|BU980158 HA18N13r HA Hordeum vulgare subsp. v... 75 2e-024
gb|CA013907.1|CA013907 HT09N23r HT Hordeum vulgare subsp. v... 78 3e-024
gb|AV914084.1|AV914084 AV914084 K. Sato unpublished cDNA li... 83 3e-024
gb|BG300073.1|BG300073 HVSMEb0011F07f Hordeum vulgare seedl... 54 3e-024
gb|AW982197.2|AW982197 HVSMEg0002E02f Hordeum vulgare pre-a... 56 4e-024
gb|AV918145.1|AV918145 AV918145 K. Sato unpublished cDNA li... 83 6e-024
gb|AV931570.1|AV931570 AV931570 K. Sato unpublished cDNA li... 103 6e-024
gb|AV934159.1|AV934159 AV934159 K. Sato unpublished cDNA li... 74 6e-024
gb|BF265663.2|BF265663 HV_CEa0013A04f Hordeum vulgare seedl... 70 6e-024
gb|CA009680.1|CA009680 HU14N01r HU Hordeum vulgare subsp. v... 71 7e-024
gb|BF259291.3|BF259291 HVSMEf0018M18f Hordeum vulgare seedl... 57 8e-024
gb|CA013420.1|CA013420 HT08G10r HT Hordeum vulgare subsp. v... 68 1e-023
gb|CA030421.1|CA030421 HX07A07r HX Hordeum vulgare subsp. v... 54 2e-023
gb|BU988879.1|BU988879 HF18P19r HF Hordeum vulgare subsp. v... 67 4e-023
gb|BU989165.1|BU989165 HF19P19r HF Hordeum vulgare subsp. v... 67 4e-023
gb|BF065218.2|BF065218 HV_CEb0024E13f Hordeum vulgare seedl... 67 5e-023
gb|BG369084.2|BG369084 HVSMEi0021K17f Hordeum vulgare 20 DA... 96 8e-023
gb|BM816368.1|BM816368 HB02H12_T3.ab1 HB Hordeum vulgare su... 69 9e-023
gb|BG415622.2|BG415622 HVSMEk0007D09f Hordeum vulgare testa... 59 2e-022
gb|CK123698.1|CK123698 BES1824105b24 BES1824 Hordeum vulgar... 75 2e-022
gb|CA002529.1|CA002529 HS07M14r HS Hordeum vulgare subsp. v... 105 5e-022
gb|CA002850.1|CA002850 HS08L10r HS Hordeum vulgare subsp. v... 105 5e-022
gb|CA002883.1|CA002883 HS08M20r HS Hordeum vulgare subsp. v... 105 5e-022
gb|BF258617.2|BF258617 HVSMEf0016D02f Hordeum vulgare seedl... 79 9e-022
gb|CA023175.1|CA023175 HZ45H08r HZ Hordeum vulgare subsp. v... 68 2e-021
gb|AJ463296.1|AJ463296 AJ463296 S00002 Hordeum vulgare subs... 103 2e-021
gb|BU976322.1|BU976322 HA03I06u HA Hordeum vulgare subsp. v... 103 2e-021
gb|CA000510.1|CA000510 HS08E02u HS Hordeum vulgare subsp. v... 103 2e-021
gb|BG367870.1|BG367870 HVSMEi0014B22f Hordeum vulgare 20 DA... 62 4e-021
gb|CA021049.1|CA021049 HZ38P08r HZ Hordeum vulgare subsp. v... 102 4e-021
gb|CV059539.1|CV059539 BNEL49c1 Barley EST endosperm librar... 54 7e-021
gb|BG343982.1|BG343982 HVSMEg0007E19f Hordeum vulgare pre-a... 62 8e-021
gb|BJ450325.1|BJ450325 BJ450325 K. Sato unpublished cDNA li... 71 8e-021
gb|CA005674.1|CA005674 HU09D12u HU Hordeum vulgare subsp. v... 101 8e-021
gb|CA010224.1|CA010224 HT11I05u HT Hordeum vulgare subsp. v... 101 8e-021
gb|BF617154.2|BF617154 HVSMEc0014M14f Hordeum vulgare seedl... 69 9e-021
>gb|BG301229.1|BG301229 HVSMEb0020B01f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0020B01f, mRNA sequence
Length = 893
Score = 384 bits (833), Expect(2) = e-117
Identities = 154/170 (90%), Positives = 163/170 (95%)
Frame = +3 / +2
Query: 291 NGQTVCVTGAAGYIASWLVKLLLEKGYTVKGTVRNPDDPKNAHLKALDGAAERLILCKAD 470
+GQTVCVTGAAGYIASWLVKLLLE+GYTVKGTVRNPDDPKNAHLKALDGAAERL+LCKAD
Sbjct: 131 HGQTVCVTGAAGYIASWLVKLLLERGYTVKGTVRNPDDPKNAHLKALDGAAERLVLCKAD 310
Query: 471 LLDYDAICRAVQGCQGVFHTASPVTDDPEQMVEPAVRGTEYVINAAAEAGTVRRVVFTSS 650
LLDYDAIC AV+GC GVFHTASPVTDDPEQMVEPAVRGTEYVI+AAA+AGTVRRVVFTSS
Sbjct: 311 LLDYDAICAAVEGCHGVFHTASPVTDDPEQMVEPAVRGTEYVIDAAADAGTVRRVVFTSS 490
Query: 651 IGAVTMDPKRGPDVVVDESCWSDLEFCEKTRNWYCYGKAVAEHAAWETAR 800
IGAVTMDP RGPDVVVDESCWSDLEFC+ T+NWYCY AVA+HAAWE AR
Sbjct: 491 IGAVTMDPNRGPDVVVDESCWSDLEFCKITKNWYCYCNAVADHAAWEKAR 640
Score = 290 bits (628), Expect(2) = 8e-086
Identities = 129/168 (76%), Positives = 131/168 (77%)
Frame = -2 / -3
Query: 796 AVSHAACSATALP*QYQFLVFSQNSRSLQHDSSTTTSGPRLGSMVTAPMDDVNTTRRTVP 617
A S AA SATAL *QYQFLV QNSRSLQ DSSTTTSGPRLGSMVTAPMDDVNTTRRTVP
Sbjct: 636 AFSXAA*SATALQ*QYQFLVILQNSRSLQQDSSTTTSGPRLGSMVTAPMDDVNTTRRTVP 457
Query: 616 ASAAALITYSVPRTAGSTICSGSSVTGEAVWKTPWQPCTXXXXXXXXXXXXXXXXXXXXA 437
ASAAA ITYSVP TAGSTICSGSSVTGEAVW TPWQP T A
Sbjct: 456 ASAAASITYSVPLTAGSTICSGSSVTGEAVWNTPWQPSTAAQMAS*SRRSALQRTSLSAA 277
Query: 436 PSSALRCAFFGSSGFLTVPFTVYPFSSSSFTNHEAMYPAAPVTHTVCP 293
PSSA RCAFFGSSGFLTVP TV P S SS T+H+AMYPAAPVTHTVCP
Sbjct: 276 PSSAFRCAFFGSSGFLTVPLTV*PLSRSSLTSHDAMYPAAPVTHTVCP 133
Score = 110 bits (234), Expect(2) = 2e-043
Identities = 45/64 (70%), Positives = 54/64 (84%)
Frame = -1 / -2
Query: 479 VQQIGLAEDQPLGGAVQRLEVRVLRVIWVPDGALHSVSLLEQQLHQPRGDVPGRAGHAHG 300
V+++GLAEDQPLGGAVQRL+V +LRVIWVP AL V+ L++QL +PR DVPG AG AHG
Sbjct: 319 VEEVGLAEDQPLGGAVQRLQVCILRVIWVPHCALDGVAPLQEQLDEPRRDVPGGAGDAHG 140
Query: 299 LPVP 288
LPVP
Sbjct: 139 LPVP 128
Score = 87.2 bits (184), Expect(2) = 2e-043
Identities = 35/48 (72%), Positives = 40/48 (83%)
Frame = -1 / -2
Query: 740 GFLAELEVAPARLVDHDVGPALGVHGHGADGRREHHPPHRAGLRRRVD 597
G LAE ++APA LVD VGPA+GVHG GADGRREH+P H AG+RRRVD
Sbjct: 580 GNLAEFKIAPAGLVDDHVGPAVGVHGDGADGRREHNPAHGAGVRRRVD 437
Score = 60.2 bits (125), Expect(2) = e-117
Identities = 28/57 (49%), Positives = 37/57 (64%)
Frame = +3 / +3
Query: 864 TVNASIAHILKYLDGSARTFANAVQAYVDVRDVADAHLRVFESPRASGRHLCAERVL 1034
TVNA+ ILK + A+AVQA++D+RD+A HLRVF P+A G C +RVL
Sbjct: 702 TVNATARPILKVP*RFRQEVAHAVQAFLDLRDIAGTHLRVFRGPKALGVTFCDKRVL 872
Score = 48.3 bits (99), Expect(2) = 8e-086
Identities = 25/50 (50%), Positives = 27/50 (54%)
Frame = -2 / -2
Query: 1006 PDARGLSKTRRCASATSRTSTYACTALAKVRAEPSRYLRMCAMLAFTVAC 857
P+A G KTRRC A SR S ACTA A LRM +AFTV C
Sbjct: 844 PNALGPLKTRRCVPAMSRKSKNACTAWATSWRNLQGTLRMGRAVAFTVGC 695
>gb|BG344152.2|BG344152 HVSMEg0007N17f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0007N17f, mRNA sequence
Length = 796
Score = 394 bits (854), Expect = e-109
Identities = 158/172 (91%), Positives = 166/172 (96%)
Frame = +3 / +3
Query: 291 NGQTVCVTGAAGYIASWLVKLLLEKGYTVKGTVRNPDDPKNAHLKALDGAAERLILCKAD 470
+GQTVCVTGAAGYIASWLVKLLLE+GYTVKGTVRNPDDPKNAHLKALDGAAERL+LCKAD
Sbjct: 135 HGQTVCVTGAAGYIASWLVKLLLERGYTVKGTVRNPDDPKNAHLKALDGAAERLVLCKAD 314
Query: 471 LLDYDAICRAVQGCQGVFHTASPVTDDPEQMVEPAVRGTEYVINAAAEAGTVRRVVFTSS 650
LLDYDAIC AV+GC GVFHTASPVTDDPEQMVEPAVRGTEYVI+AAA+AGTVRRVVFTSS
Sbjct: 315 LLDYDAICAAVEGCHGVFHTASPVTDDPEQMVEPAVRGTEYVIDAAADAGTVRRVVFTSS 494
Query: 651 IGAVTMDPKRGPDVVVDESCWSDLEFCEKTRNWYCYGKAVAEHAAWETARRR 806
IGAVTMDP RGPDVVVDESCWSDLEFC+KT+NWYCYGKAVAE AAWE AR R
Sbjct: 495 IGAVTMDPNRGPDVVVDESCWSDLEFCKKTKNWYCYGKAVAEQAAWEKARAR 650
Score = 307 bits (664), Expect = 1e-082
Identities = 133/168 (79%), Positives = 135/168 (80%)
Frame = -2 / -1
Query: 796 AVSHAACSATALP*QYQFLVFSQNSRSLQHDSSTTTSGPRLGSMVTAPMDDVNTTRRTVP 617
A SHAACSATALP*QYQFLVF QNSRSLQ DSSTTTSGPRLGSMVTAPMDDVNTTRRTVP
Sbjct: 640 AFSHAACSATALP*QYQFLVFLQNSRSLQQDSSTTTSGPRLGSMVTAPMDDVNTTRRTVP 461
Query: 616 ASAAALITYSVPRTAGSTICSGSSVTGEAVWKTPWQPCTXXXXXXXXXXXXXXXXXXXXA 437
ASAAA ITYSVP TAGSTICSGSSVTGEAVW TPWQP T A
Sbjct: 460 ASAAASITYSVPLTAGSTICSGSSVTGEAVWNTPWQPSTAAQMAS*SRRSALQRTSLSAA 281
Query: 436 PSSALRCAFFGSSGFLTVPFTVYPFSSSSFTNHEAMYPAAPVTHTVCP 293
PSSA RCAFFGSSGFLTVP TV P S SS T+H+AMYPAAPVTHTVCP
Sbjct: 280 PSSAFRCAFFGSSGFLTVPLTV*PLSRSSLTSHDAMYPAAPVTHTVCP 137
Score = 110 bits (234), Expect(2) = 3e-045
Identities = 45/64 (70%), Positives = 54/64 (84%)
Frame = -1 / -3
Query: 479 VQQIGLAEDQPLGGAVQRLEVRVLRVIWVPDGALHSVSLLEQQLHQPRGDVPGRAGHAHG 300
V+++GLAEDQPLGGAVQRL+V +LRVIWVP AL V+ L++QL +PR DVPG AG AHG
Sbjct: 323 VEEVGLAEDQPLGGAVQRLQVCILRVIWVPHCALDGVAPLQEQLDEPRRDVPGGAGDAHG 144
Query: 299 LPVP 288
LPVP
Sbjct: 143 LPVP 132
Score = 93.2 bits (197), Expect(2) = 3e-045
Identities = 37/48 (77%), Positives = 42/48 (87%)
Frame = -1 / -3
Query: 740 GFLAELEVAPARLVDHDVGPALGVHGHGADGRREHHPPHRAGLRRRVD 597
GFLAEL++APA LVD VGPA+GVHG GADGRREH+P H AG+RRRVD
Sbjct: 584 GFLAELKIAPAGLVDDHVGPAVGVHGDGADGRREHNPAHGAGVRRRVD 441
>gb|BI960557.1|BI960557 HVSMEn0025A09f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0025A09f, mRNA sequence
Length = 669
Score = 388 bits (841), Expect = e-107
Identities = 154/170 (90%), Positives = 165/170 (97%)
Frame = +3 / +2
Query: 291 NGQTVCVTGAAGYIASWLVKLLLEKGYTVKGTVRNPDDPKNAHLKALDGAAERLILCKAD 470
+GQTVCVTGAAGYIASWLVKLLLE+GYTVKGTVRNPDDPKNAHLKALDGAAERL+LCKAD
Sbjct: 137 HGQTVCVTGAAGYIASWLVKLLLERGYTVKGTVRNPDDPKNAHLKALDGAAERLVLCKAD 316
Query: 471 LLDYDAICRAVQGCQGVFHTASPVTDDPEQMVEPAVRGTEYVINAAAEAGTVRRVVFTSS 650
LLDYDAIC AV+GC GVFHTASPVTDDPEQMVEPAVRGTEYVI+AAA+AGTVRRVVFTSS
Sbjct: 317 LLDYDAICAAVEGCHGVFHTASPVTDDPEQMVEPAVRGTEYVIDAAADAGTVRRVVFTSS 496
Query: 651 IGAVTMDPKRGPDVVVDESCWSDLEFCEKTRNWYCYGKAVAEHAAWETAR 800
IGAVTMDP RGPDVVVDESCWSDLEFC+KT+NWYCYGKAVA+ AAW+ A+
Sbjct: 497 IGAVTMDPNRGPDVVVDESCWSDLEFCKKTKNWYCYGKAVADQAAWDKAK 646
Score = 302 bits (653), Expect = 4e-081
Identities = 132/168 (78%), Positives = 135/168 (80%)
Frame = -2 / -1
Query: 796 AVSHAACSATALP*QYQFLVFSQNSRSLQHDSSTTTSGPRLGSMVTAPMDDVNTTRRTVP 617
A+SHAA SATALP*QYQFLVF QNSRSLQ DSSTTTSGPRLGSMVTAPMDDVNTTRRTVP
Sbjct: 642 ALSHAA*SATALP*QYQFLVFLQNSRSLQQDSSTTTSGPRLGSMVTAPMDDVNTTRRTVP 463
Query: 616 ASAAALITYSVPRTAGSTICSGSSVTGEAVWKTPWQPCTXXXXXXXXXXXXXXXXXXXXA 437
ASAAA ITYSVP TAGSTICSGSSVTGEAVW TPWQP T A
Sbjct: 462 ASAAASITYSVPLTAGSTICSGSSVTGEAVWNTPWQPSTAAQMAS*SRRSALQRTSLSAA 283
Query: 436 PSSALRCAFFGSSGFLTVPFTVYPFSSSSFTNHEAMYPAAPVTHTVCP 293
PSSA RCAFFGSSGFLTVP TV P S SS T+H+AMYPAAPVTHTVCP
Sbjct: 282 PSSAFRCAFFGSSGFLTVPLTV*PLSRSSLTSHDAMYPAAPVTHTVCP 139
Score = 110 bits (234), Expect(2) = 3e-045
Identities = 45/64 (70%), Positives = 54/64 (84%)
Frame = -1 / -3
Query: 479 VQQIGLAEDQPLGGAVQRLEVRVLRVIWVPDGALHSVSLLEQQLHQPRGDVPGRAGHAHG 300
V+++GLAEDQPLGGAVQRL+V +LRVIWVP AL V+ L++QL +PR DVPG AG AHG
Sbjct: 325 VEEVGLAEDQPLGGAVQRLQVCILRVIWVPHCALDGVAPLQEQLDEPRRDVPGGAGDAHG 146
Query: 299 LPVP 288
LPVP
Sbjct: 145 LPVP 134
Score = 93.2 bits (197), Expect(2) = 3e-045
Identities = 37/48 (77%), Positives = 42/48 (87%)
Frame = -1 / -3
Query: 740 GFLAELEVAPARLVDHDVGPALGVHGHGADGRREHHPPHRAGLRRRVD 597
GFLAEL++APA LVD VGPA+GVHG GADGRREH+P H AG+RRRVD
Sbjct: 586 GFLAELKIAPAGLVDDHVGPAVGVHGDGADGRREHNPAHGAGVRRRVD 443
>gb|BI958105.1|BI958105 HVSMEn0013G15f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0013G15f, mRNA sequence
Length = 655
Score = 385 bits (834), Expect = e-106
Identities = 153/166 (92%), Positives = 162/166 (97%)
Frame = +3 / +2
Query: 291 NGQTVCVTGAAGYIASWLVKLLLEKGYTVKGTVRNPDDPKNAHLKALDGAAERLILCKAD 470
+GQTVCVTGAAGYIASWLVKLLLE+GYTVKGTVRNPDDPKNAHLKALDGAAERL+LCKAD
Sbjct: 134 HGQTVCVTGAAGYIASWLVKLLLERGYTVKGTVRNPDDPKNAHLKALDGAAERLVLCKAD 313
Query: 471 LLDYDAICRAVQGCQGVFHTASPVTDDPEQMVEPAVRGTEYVINAAAEAGTVRRVVFTSS 650
LLDYDAIC AV+GC GVFHTASPVTDDPEQMVEPAVRGTEYVI+AAA+AGTVRRVVFTSS
Sbjct: 314 LLDYDAICAAVEGCHGVFHTASPVTDDPEQMVEPAVRGTEYVIDAAADAGTVRRVVFTSS 493
Query: 651 IGAVTMDPKRGPDVVVDESCWSDLEFCEKTRNWYCYGKAVAEHAAW 788
IGAVTMDP RGPDVVVDESCWSDLEFC+KT+NWYCYGKAVA+ AAW
Sbjct: 494 IGAVTMDPNRGPDVVVDESCWSDLEFCKKTKNWYCYGKAVADQAAW 631
Score = 291 bits (630), Expect = 6e-078
Identities = 127/164 (77%), Positives = 130/164 (79%)
Frame = -2 / -2
Query: 784 AACSATALP*QYQFLVFSQNSRSLQHDSSTTTSGPRLGSMVTAPMDDVNTTRRTVPASAA 605
AA SATA P*QYQFLVF QNSRSLQ DSSTTTSGPRLGSMVTAPM+DVNTTRRTVPASAA
Sbjct: 627 AAWSATAFP*QYQFLVFLQNSRSLQQDSSTTTSGPRLGSMVTAPMEDVNTTRRTVPASAA 448
Query: 604 ALITYSVPRTAGSTICSGSSVTGEAVWKTPWQPCTXXXXXXXXXXXXXXXXXXXXAPSSA 425
A ITYSVP TAGSTICSGSSVTGEAVW TPWQP T APSSA
Sbjct: 447 ASITYSVPLTAGSTICSGSSVTGEAVWNTPWQPSTAAQMAS*SRRSALQRTSLSAAPSSA 268
Query: 424 LRCAFFGSSGFLTVPFTVYPFSSSSFTNHEAMYPAAPVTHTVCP 293
RCAFFGSSGFLTVP TV P S SS T+H+AMYPAAPVTHTVCP
Sbjct: 267 FRCAFFGSSGFLTVPLTV*PLSRSSLTSHDAMYPAAPVTHTVCP 136
Score = 110 bits (234), Expect(2) = 4e-044
Identities = 45/64 (70%), Positives = 54/64 (84%)
Frame = -1 / -1
Query: 479 VQQIGLAEDQPLGGAVQRLEVRVLRVIWVPDGALHSVSLLEQQLHQPRGDVPGRAGHAHG 300
V+++GLAEDQPLGGAVQRL+V +LRVIWVP AL V+ L++QL +PR DVPG AG AHG
Sbjct: 322 VEEVGLAEDQPLGGAVQRLQVCILRVIWVPHCALDGVAPLQEQLDEPRRDVPGGAGDAHG 143
Query: 299 LPVP 288
LPVP
Sbjct: 142 LPVP 131
Score = 89.5 bits (189), Expect(2) = 4e-044
Identities = 36/48 (75%), Positives = 41/48 (85%)
Frame = -1 / -1
Query: 740 GFLAELEVAPARLVDHDVGPALGVHGHGADGRREHHPPHRAGLRRRVD 597
GFLAEL++APA LVD VG A+GVHG GADGRREH+P H AG+RRRVD
Sbjct: 583 GFLAELKIAPAGLVDDHVGAAVGVHGDGADGRREHNPAHGAGVRRRVD 440
>gb|BQ763369.1|BQ763369 EBro02_SQ008_J04_R root, 3 week, hydroponic grown, low nitrogen, cv
Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone
EBro02_SQ008_J04 5', mRNA sequence
Length = 598
Score = 261 bits (564), Expect(2) = 2e-093
Identities = 106/114 (92%), Positives = 112/114 (98%)
Frame = +3 / +2
Query: 291 NGQTVCVTGAAGYIASWLVKLLLEKGYTVKGTVRNPDDPKNAHLKALDGAAERLILCKAD 470
+GQTVCVTGAAGYIASWLVKLLLE+GYTVKGTVRNPDDPKNAHLKALDGAAERL+LCKAD
Sbjct: 131 HGQTVCVTGAAGYIASWLVKLLLERGYTVKGTVRNPDDPKNAHLKALDGAAERLVLCKAD 310
Query: 471 LLDYDAICRAVQGCQGVFHTASPVTDDPEQMVEPAVRGTEYVINAAAEAGTVRR 632
LLDYDAIC AV+GC GVFHTASPVTDDPEQMVEPAVRGTEYVI+AAA+AGTVRR
Sbjct: 311 LLDYDAICAAVEGCHGVFHTASPVTDDPEQMVEPAVRGTEYVIDAAADAGTVRR 472
Score = 189 bits (408), Expect(2) = 6e-069
Identities = 81/113 (71%), Positives = 83/113 (73%)
Frame = -2 / -2
Query: 631 RRTVPASAAALITYSVPRTAGSTICSGSSVTGEAVWKTPWQPCTXXXXXXXXXXXXXXXX 452
RRTVPASAAA ITYSVP TAGSTICSGSSVTGEAVW TPWQP T
Sbjct: 471 RRTVPASAAASITYSVPLTAGSTICSGSSVTGEAVWNTPWQPSTAAQMAS*SRRSALQRT 292
Query: 451 XXXXAPSSALRCAFFGSSGFLTVPFTVYPFSSSSFTNHEAMYPAAPVTHTVCP 293
APSSA RCAFFGSSGFLTVP TV P S SS T+H+AMYPAAPVTHTVCP
Sbjct: 291 SLSAAPSSAFRCAFFGSSGFLTVPLTV*PLSRSSLTSHDAMYPAAPVTHTVCP 133
Score = 110 bits (234), Expect(3) = 9e-042
Identities = 45/64 (70%), Positives = 54/64 (84%)
Frame = -1 / -1
Query: 479 VQQIGLAEDQPLGGAVQRLEVRVLRVIWVPDGALHSVSLLEQQLHQPRGDVPGRAGHAHG 300
V+++GLAEDQPLGGAVQRL+V +LRVIWVP AL V+ L++QL +PR DVPG AG AHG
Sbjct: 319 VEEVGLAEDQPLGGAVQRLQVCILRVIWVPHCALDGVAPLQEQLDEPRRDVPGGAGDAHG 140
Query: 299 LPVP 288
LPVP
Sbjct: 139 LPVP 128
Score = 103 bits (219), Expect(2) = 2e-093
Identities = 38/41 (92%), Positives = 40/41 (97%)
Frame = +3 / +3
Query: 633 VVFTSSIGAVTMDPKRGPDVVVDESCWSDLEFCEKTRNWYC 755
VVFTSSIGAVTMDP RGPDVVVDESCWSDLEFC+KT+NWYC
Sbjct: 474 VVFTSSIGAVTMDPNRGPDVVVDESCWSDLEFCKKTKNWYC 596
Score = 92.7 bits (196), Expect(2) = 6e-069
Identities = 40/42 (95%), Positives = 40/42 (95%)
Frame = -2 / -1
Query: 757 *QYQFLVFSQNSRSLQHDSSTTTSGPRLGSMVTAPMDDVNTT 632
*QYQFLVF QNSRSLQ DSSTTTSGPRLGSMVTAPMDDVNTT
Sbjct: 598 *QYQFLVFLQNSRSLQQDSSTTTSGPRLGSMVTAPMDDVNTT 473
Score = 74.8 bits (157), Expect(3) = 9e-042
Identities = 30/40 (75%), Positives = 34/40 (85%)
Frame = -1 / -3
Query: 740 GFLAELEVAPARLVDHDVGPALGVHGHGADGRREHHPPHR 621
GFLAEL++APA LVD VGPA+GVHG GADGRREH+P R
Sbjct: 581 GFLAELKIAPAGLVDDHVGPAVGVHGDGADGRREHNPGAR 462
Score = 24.9 bits (48), Expect(3) = 9e-042
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -1 / -1
Query: 632 PPHRAGLRRRVD 597
P H AG+RRRVD
Sbjct: 472 PAHGAGVRRRVD 437
>gb|BI960699.1|BI960699 HVSMEn0025O19f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0025O19f, mRNA sequence
Length = 661
Score = 336 bits (729), Expect = 1e-091
Identities = 134/169 (79%), Positives = 149/169 (88%)
Frame = +3 / +2
Query: 291 NGQTVCVTGAAGYIASWLVKLLLEKGYTVKGTVRNPDDPKNAHLKALDGAAERLILCKAD 470
+GQTVCVTGA GYI SWLVKLLL+KGY V+GTVRNPDD KNAHL+AL GAAERL+LCKAD
Sbjct: 83 HGQTVCVTGAGGYIGSWLVKLLLDKGYAVRGTVRNPDDAKNAHLRALAGAAERLVLCKAD 262
Query: 471 LLDYDAICRAVQGCQGVFHTASPVTDDPEQMVEPAVRGTEYVINAAAEAGTVRRVVFTSS 650
LLD DA+ +A+ GC GVFHTASPVTDDPE+MVEPAVRGT +I+AAAE+GTVRRVV TSS
Sbjct: 263 LLDGDALRQAIAGCHGVFHTASPVTDDPEEMVEPAVRGTLNIIDAAAESGTVRRVVLTSS 442
Query: 651 IGAVTMDPKRGPDVVVDESCWSDLEFCEKTRNWYCYGKAVAEHAAWETA 797
IGA+ MDP RG D VVDESCWSDLEFC+KT+NWYCYGKA A AAWE A
Sbjct: 443 IGAIAMDPNRGADAVVDESCWSDLEFCKKTKNWYCYGKAAAXXAAWEAA 589
Score = 257 bits (555), Expect = 1e-067
Identities = 113/169 (66%), Positives = 120/169 (71%)
Frame = -2 / -2
Query: 796 AVSHAACSATALP*QYQFLVFSQNSRSLQHDSSTTTSGPRLGSMVTAPMDDVNTTRRTVP 617
A SHAA SA A P*QYQFLVF QNSRSLQ DSSTT S PRLGSM APMDDV+TTRRTVP
Sbjct: 588 AASHAAXSAAAFP*QYQFLVFLQNSRSLQQDSSTTASAPRLGSMAIAPMDDVSTTRRTVP 409
Query: 616 ASAAALITYSVPRTAGSTICSGSSVTGEAVWKTPWQPCTXXXXXXXXXXXXXXXXXXXXA 437
SAAA + SVP TAGSTI SGSSVTG+AVWKTPWQP A
Sbjct: 408 DSAAASMMLSVPLTAGSTISSGSSVTGDAVWKTPWQPAMAWRSASPSSRSALHSTSLSAA 229
Query: 436 PSSALRCAFFGSSGFLTVPFTVYPFSSSSFTNHEAMYPAAPVTHTVCPF 290
P+ ALRCAFF SSGFLTVP T YP S S T+H+ M P APVTHTVCP+
Sbjct: 228 PARALRCAFFASSGFLTVPRTAYPLSRRSLTSHDPM*PPAPVTHTVCPW 82
Score = 91.8 bits (194), Expect(2) = 4e-036
Identities = 40/66 (60%), Positives = 49/66 (74%)
Frame = -1 / -1
Query: 479 VQQIGLAEDQPLGGAVQRLEVRVLRVIWVPDGALHSVSLLEQQLHQPRGDVPGRAGHAHG 300
V+Q+GLA+ QPL A + +VRVLRVI VPDGA H V L+E++L +PR DV AGHAH
Sbjct: 271 VEQVGLAQHQPLRRAGESPQVRVLRVIGVPDGASHGVPLVEEELDEPRPDVAAGAGHAHR 92
Query: 299 LPVPRR 282
LPV RR
Sbjct: 91 LPVARR 74
Score = 80.8 bits (170), Expect(2) = 4e-036
Identities = 35/48 (72%), Positives = 37/48 (77%)
Frame = -1 / -1
Query: 740 GFLAELEVAPARLVDHDVGPALGVHGHGADGRREHHPPHRAGLRRRVD 597
G LAELEVAPA LVD VG A+GVHG ADGRR+H RAGLRRRVD
Sbjct: 532 GLLAELEVAPAGLVDDGVGAAVGVHGDSADGRRQHDAADRAGLRRRVD 389
>gb|BF263685.3|BF263685 HV_CEa0007G08f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0007G08f, mRNA sequence
Length = 819
Score = 334 bits (724), Expect = 7e-091
Identities = 134/171 (78%), Positives = 148/171 (86%)
Frame = +3 / +1
Query: 291 NGQTVCVTGAAGYIASWLVKLLLEKGYTVKGTVRNPDDPKNAHLKALDGAAERLILCKAD 470
+GQTVCVTGA GYI SW+VKLLLEKGY V+GTVRNPDD KNAHL+AL GAAERL+LCKAD
Sbjct: 58 DGQTVCVTGAGGYIGSWIVKLLLEKGYAVRGTVRNPDDAKNAHLRALAGAAERLVLCKAD 237
Query: 471 LLDYDAICRAVQGCQGVFHTASPVTDDPEQMVEPAVRGTEYVINAAAEAGTVRRVVFTSS 650
LLD DA+ A+ GC GVFHTASPVTDDPE+MVEPAVRGT YVI+AAA++GTVRRVV TSS
Sbjct: 238 LLDGDALRAAIAGCHGVFHTASPVTDDPEEMVEPAVRGTRYVIDAAAQSGTVRRVVLTSS 417
Query: 651 IGAVTMDPKRGPDVVVDESCWSDLEFCEKTRNWYCYGKAVAEHAAWETARR 803
IGAV MDP R PD VVDESCWS+LEFC+KT+NWYCYGK VAE A E R
Sbjct: 418 IGAVAMDPSRDPDAVVDESCWSNLEFCKKTKNWYCYGKTVAEREALEAXXR 570
Score = 246 bits (531), Expect = 3e-064
Identities = 111/166 (66%), Positives = 116/166 (69%)
Frame = -2 / -2
Query: 790 SHAACSATALP*QYQFLVFSQNSRSLQHDSSTTTSGPRLGSMVTAPMDDVNTTRRTVPAS 611
S A+ SAT P*QYQFLVF QNSR LQ DSSTT SG RLGSM TAPMDDV+TTRRTVP
Sbjct: 557 SKASRSATVFP*QYQFLVFLQNSRLLQQDSSTTASGSRLGSMATAPMDDVSTTRRTVPDW 378
Query: 610 AAALITYSVPRTAGSTICSGSSVTGEAVWKTPWQPCTXXXXXXXXXXXXXXXXXXXXAPS 431
AAA +T VP TAGSTI SGSSVTGEAVWKTPWQP AP+
Sbjct: 377 AAASMT*RVPLTAGSTISSGSSVTGEAVWKTPWQPAMAARSASPSSRSALHSTSRSAAPA 198
Query: 430 SALRCAFFGSSGFLTVPFTVYPFSSSSFTNHEAMYPAAPVTHTVCP 293
ALRCAFF SSGFLTVP T YPFSS S T + M P APVTHTVCP
Sbjct: 197 RALRCAFFASSGFLTVPRTAYPFSSRSLTIQDPM*PPAPVTHTVCP 60
Score = 95.9 bits (203), Expect(2) = 4e-035
Identities = 41/65 (63%), Positives = 48/65 (73%)
Frame = -1 / -1
Query: 479 VQQIGLAEDQPLGGAVQRLEVRVLRVIWVPDGALHSVSLLEQQLHQPRGDVPGRAGHAHG 300
V+Q+GLA+ QPL A + +VRVLRVIWVPDGA H V LL+Q+L PR DV AGHAH
Sbjct: 246 VEQVGLAQHQPLRRAGESPQVRVLRVIWVPDGASHGVPLLQQELDDPRPDVAAGAGHAHR 67
Query: 299 LPVPR 285
LPV R
Sbjct: 66 LPVSR 52
Score = 73.5 bits (154), Expect(2) = 4e-035
Identities = 34/48 (70%), Positives = 34/48 (70%)
Frame = -1 / -1
Query: 740 GFLAELEVAPARLVDHDVGPALGVHGHGADGRREHHPPHRAGLRRRVD 597
G LAELEVAPA LVD V A GVHG GADGRREH RAGL R VD
Sbjct: 507 GLLAELEVAPAGLVDDGVRVAAGVHGDGADGRREHDAADRAGLGRGVD 364
>gb|BI958862.1|BI958862 HVSMEn0016O20f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0016O20f, mRNA sequence
Length = 670
Score = 333 bits (722), Expect = 1e-090
Identities = 139/158 (87%), Positives = 147/158 (93%)
Frame = +3 / +3
Query: 291 NGQTVCVTGAAGYIASWLVKLLLEKGYTVKGTVRNPDDPKNAHLKALDGAAERLILCKAD 470
+GQTVCVTGAAGYIASWLVKLLLE+GYTVKGTVRNPDDPKNAHLKALDGAAERL+LCKAD
Sbjct: 138 HGQTVCVTGAAGYIASWLVKLLLERGYTVKGTVRNPDDPKNAHLKALDGAAERLVLCKAD 317
Query: 471 LLDYDAICRAVQGCQGVFHTASPVTDDPEQMVEPAVRGTEYVINAAAEAGTVRRVVFTSS 650
LLDYDAIC AV+GC GVFHTASPVTDDPEQMVEPAVRGTEYVI+AAA+AGTVRRVVFTSS
Sbjct: 318 LLDYDAICAAVEGCHGVFHTASPVTDDPEQMVEPAVRGTEYVIDAAADAGTVRRVVFTSS 497
Query: 651 IGAVTMDPKRGPDVVVDESCWSDLEFCEKTRNWYCYGK 764
IGAVTMDP RGPDVVVDESC SDL F +T+N Y K
Sbjct: 498 IGAVTMDPNRGPDVVVDESC*SDL*FLAETKNLYLLRK 611
Score = 269 bits (582), Expect = 3e-071
Identities = 115/154 (74%), Positives = 121/154 (78%)
Frame = -2 / -1
Query: 754 QYQFLVFSQNSRSLQHDSSTTTSGPRLGSMVTAPMDDVNTTRRTVPASAAALITYSVPRT 575
+Y+FLV ++N RSLQ DSSTTTSGPRLGSMVTAPMDDVNTTRRTVPASAAA ITYSVP T
Sbjct: 601 KYKFLVSARNQRSLQQDSSTTTSGPRLGSMVTAPMDDVNTTRRTVPASAAASITYSVPLT 422
Query: 574 AGSTICSGSSVTGEAVWKTPWQPCTXXXXXXXXXXXXXXXXXXXXAPSSALRCAFFGSSG 395
AGSTICSGSSVTGEAVW TPWQP T APSSA RCAFFGSSG
Sbjct: 421 AGSTICSGSSVTGEAVWNTPWQPSTAAQMAS*SRRSALQRTSLSAAPSSAFRCAFFGSSG 242
Query: 394 FLTVPFTVYPFSSSSFTNHEAMYPAAPVTHTVCP 293
FLTVP TV P S SS T+H+AMYPAAPVTHTVCP
Sbjct: 241 FLTVPLTV*PLSRSSLTSHDAMYPAAPVTHTVCP 140
Score = 110 bits (234), Expect(3) = 1e-044
Identities = 45/64 (70%), Positives = 54/64 (84%)
Frame = -1 / -3
Query: 479 VQQIGLAEDQPLGGAVQRLEVRVLRVIWVPDGALHSVSLLEQQLHQPRGDVPGRAGHAHG 300
V+++GLAEDQPLGGAVQRL+V +LRVIWVP AL V+ L++QL +PR DVPG AG AHG
Sbjct: 326 VEEVGLAEDQPLGGAVQRLQVCILRVIWVPHCALDGVAPLQEQLDEPRRDVPGGAGDAHG 147
Query: 299 LPVP 288
LPVP
Sbjct: 146 LPVP 135
Score = 80.3 bits (169), Expect(3) = 1e-044
Identities = 32/48 (66%), Positives = 38/48 (79%)
Frame = -1 / -3
Query: 740 GFLAELEVAPARLVDHDVGPALGVHGHGADGRREHHPPHRAGLRRRVD 597
GF + ++A A LVD VGPA+GVHG GADGRREH+P H AG+RRRVD
Sbjct: 587 GFCQKSKIASAGLVDDHVGPAVGVHGDGADGRREHNPAHGAGVRRRVD 444
Score = 29.0 bits (57), Expect(3) = 1e-044
Identities = 15/24 (62%), Positives = 16/24 (66%)
Frame = -2 / -3
Query: 790 SHAACSATALP*QYQFLVFSQNSR 719
S AA SATALP Q Q L F Q S+
Sbjct: 638 SKAAGSATALPEQVQVLGFCQKSK 567
>gb|BQ766677.1|BQ766677 EBro08_SQ006_F23_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ006_F23 5', mRNA sequence
Length = 657
Score = 160 bits (345), Expect(3) = 1e-081
Identities = 63/97 (64%), Positives = 80/97 (82%)
Frame = +3 / +1
Query: 345 VKLLLEKGYTVKGTVRNPDDPKNAHLKALDGAAERLILCKADLLDYDAICRAVQGCQGVF 524
VK LL+KGYTV+GTVRNP DPKN HL+A DGAA+RL+L +ADL++ + + A GC+G+F
Sbjct: 1 VKRLLQKGYTVRGTVRNPVDPKNDHLRAFDGAADRLVLLRADLMEPETLVEAFTGCEGIF 180
Query: 525 HTASPVTDDPEQMVEPAVRGTEYVINAAAEAGTVRRV 635
H ASPVTDDPE+M+EPA+RGT+YVI AAA+ G R V
Sbjct: 181 HAASPVTDDPEKMIEPAIRGTKYVITAAADMGIKRVV 291
Score = 131 bits (281), Expect(2) = 2e-036
Identities = 68/134 (50%), Positives = 75/134 (55%)
Frame = -2 / -2
Query: 1000 ARGLSKTRRCASATSRTSTYACTALAKVRAEPSRYLRMCAMLAFTVACXXXXXXXXXXXX 821
A G S TR CASATS T TYAC A V A+P RY C++LAFTV C
Sbjct: 653 ASGAS*TRTCASATSLTCTYACAAFTYVLADPVRYFITCSVLAFTVGCSSGPSTSTRFTT 474
Query: 820 XXXXXXXRAVSHAACSATALP*QYQFLVFSQNSRSLQHDSSTTTSGPRLGSMVTAPMDDV 641
RAVS A+CSAT L *QYQF VF Q SRSLQ SST G G M T PM DV
Sbjct: 473 TSSMPRCRAVSSASCSATVLA*QYQFAVFLQ*SRSLQQVSSTGLLGSLWGFMYTVPMVDV 294
Query: 640 NTTRRTVPASAAAL 599
TTR ++AA +
Sbjct: 293 KTTRLMPMSAAAVI 252
Score = 105 bits (224), Expect(3) = 1e-029
Identities = 49/91 (53%), Positives = 54/91 (59%)
Frame = -2 / -2
Query: 634 TRRTVPASAAALITYSVPRTAGSTICSGSSVTGEAVWKTPWQPCTXXXXXXXXXXXXXXX 455
T R +P SAAA+ITY VPR AGS I SGSSVTGEA WK P QP
Sbjct: 290 TTRLMPMSAAAVITYLVPRIAGSIIFSGSSVTGEAAWKMPSQPVKASTRVSGSIRSARRR 111
Query: 454 XXXXXAPSSALRCAFFGSSGFLTVPFTVYPF 362
APS AL+ +FFGS+G TVP TVYPF
Sbjct: 110 TRRSAAPSKALK*SFFGSTGLRTVPRTVYPF 18
Score = 103 bits (219), Expect(3) = 1e-081
Identities = 38/61 (62%), Positives = 48/61 (78%)
Frame = +3 / +1
Query: 624 VRRVVFTSSIGAVTMDPKRGPDVVVDESCWSDLEFCEKTRNWYCYGKAVAEHAAWETARR 803
++RVVFTS+IG V M+P R P VD++CWSDL++C+KT NWYCY K VAE A ETAR+
Sbjct: 277 IKRVVFTSTIGTVYMNPHRDPSKPVDDTCWSDLDYCKKTANWYCYAKTVAEQDALETARQ 456
Query: 804 R 806
R
Sbjct: 457 R 459
Score = 79.9 bits (168), Expect(3) = 1e-081
Identities = 31/48 (64%), Positives = 40/48 (83%)
Frame = +3 / +1
Query: 858 QATVNASIAHILKYLDGSARTFANAVQAYVDVRDVADAHLRVFESPRA 1001
Q TVNAS H++KYL GSA+T+ NA QAYV V+DVA+AH+RV+E+P A
Sbjct: 511 QPTVNASTEHVMKYLTGSAKTYVNAAQAYVHVKDVAEAHVRVYEAPDA 654
Score = 44.1 bits (90), Expect(3) = 1e-029
Identities = 18/33 (54%), Positives = 24/33 (72%)
Frame = -1 / -1
Query: 731 AELEVAPARLVDHDVGPALGVHGHGADGRREHH 633
A ++VAPA ++D G +GVH H ADGRRE+H
Sbjct: 384 AVVKVAPAGVIDGLAGVPVGVHVHRADGRRENH 286
Score = 42.3 bits (86), Expect(2) = 2e-036
Identities = 20/44 (45%), Positives = 29/44 (65%)
Frame = -1 / -1
Query: 479 VQQIGLAEDQPLGGAVQRLEVRVLRVIWVPDGALHSVSLLEQQL 348
+ +IG ED+ +GGAV+ +V VL + V +GA H V LLE+ L
Sbjct: 135 LHKIGAEEDEAVGGAVKGSQVIVLWINRVANGASHGVPLLEEAL 4
Score = 24.4 bits (47), Expect(3) = 1e-029
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = -1 / -1
Query: 914 GRAVQVLEDVRDAGVHRRL 858
GR QVL V A VHRRL
Sbjct: 567 GRPRQVLHHVLRARVHRRL 511
>gb|BI959031.1|BI959031 HVSMEn0017M21f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0017M21f, mRNA sequence
Length = 646
Score = 303 bits (656), Expect = 2e-081
Identities = 122/161 (75%), Positives = 137/161 (85%)
Frame = +3 / +3
Query: 315 GAAGYIASWLVKLLLEKGYTVKGTVRNPDDPKNAHLKALDGAAERLILCKADLLDYDAIC 494
GA GY+ +VKLLL+KGY V+GTVRNPDD KNAHL+AL GAAERL+LCKADLLD DA+
Sbjct: 3 GAGGYMGWGVVKLLLDKGYAVRGTVRNPDDAKNAHLRALAGAAERLVLCKADLLDGDALR 182
Query: 495 RAVQGCQGVFHTASPVTDDPEQMVEPAVRGTEYVINAAAEAGTVRRVVFTSSIGAVTMDP 674
A+ GC GVFHTASPVTDDPE+MVEPAVRGT +I+AAAE+GTVRRVV TSSIGA+ MDP
Sbjct: 183 GAIAGCHGVFHTASPVTDDPEEMVEPAVRGTLNIIDAAAESGTVRRVVLTSSIGAIAMDP 362
Query: 675 KRGPDVVVDESCWSDLEFCEKTRNWYCYGKAVAEHAAWETA 797
RG D VVDESCWSDLEFC+KT+NWYCYGKA A AAW A
Sbjct: 363 NRGADAVVDESCWSDLEFCKKTKNWYCYGKAAAXRAAWXAA 485
Score = 231 bits (498), Expect = 1e-059
Identities = 105/161 (65%), Positives = 109/161 (67%)
Frame = -2 / -1
Query: 796 AVSHAACSATALP*QYQFLVFSQNSRSLQHDSSTTTSGPRLGSMVTAPMDDVNTTRRTVP 617
A SHAA SA A P*QYQFLVF QNSRSLQ DSSTT S PRLGSM APMDDV+TTRRTVP
Sbjct: 484 AASHAARSAAAFP*QYQFLVFLQNSRSLQQDSSTTASAPRLGSMAIAPMDDVSTTRRTVP 305
Query: 616 ASAAALITYSVPRTAGSTICSGSSVTGEAVWKTPWQPCTXXXXXXXXXXXXXXXXXXXXA 437
SAAA + SVP TAGSTI SGSSVTG+AVWKTPWQP A
Sbjct: 304 DSAAASMMLSVPLTAGSTISSGSSVTGDAVWKTPWQPAMAPRSASPSSRSALHSTSLSAA 125
Query: 436 PSSALRCAFFGSSGFLTVPFTVYPFSSSSFTNHEAMYPAAP 314
P+ ALRCAFF SSGFLTVP T YP S S T M P AP
Sbjct: 124 PARALRCAFFASSGFLTVPRTAYPLSRRSLTTPHPM*PPAP 2
Score = 80.8 bits (170), Expect(2) = 2e-027
Identities = 35/48 (72%), Positives = 37/48 (77%)
Frame = -1 / -3
Query: 740 GFLAELEVAPARLVDHDVGPALGVHGHGADGRREHHPPHRAGLRRRVD 597
G LAELEVAPA LVD VG A+GVHG ADGRR+H RAGLRRRVD
Sbjct: 428 GLLAELEVAPAGLVDDGVGAAVGVHGDSADGRRQHDAADRAGLRRRVD 285
Score = 62.5 bits (130), Expect(2) = 2e-027
Identities = 27/47 (57%), Positives = 35/47 (74%)
Frame = -1 / -3
Query: 479 VQQIGLAEDQPLGGAVQRLEVRVLRVIWVPDGALHSVSLLEQQLHQP 339
V+Q+GLA+ QPL A + +VRVLRVI VPDGA H V L+E++L P
Sbjct: 167 VEQVGLAQHQPLRRAGESPQVRVLRVIGVPDGASHGVPLVEEELDDP 27
>gb|BI957284.1|BI957284 HVSMEn0008K05f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0008K05f, mRNA sequence
Length = 860
Score = 292 bits (633), Expect = 2e-078
Identities = 122/139 (87%), Positives = 128/139 (92%)
Frame = +3 / +3
Query: 291 NGQTVCVTGAAGYIASWLVKLLLEKGYTVKGTVRNPDDPKNAHLKALDGAAERLILCKAD 470
+GQTVCVTGAAGYIASWLV LLLE+GYTVKGTVRNPDDPKNAHLKALDGAAERL+LCKAD
Sbjct: 123 HGQTVCVTGAAGYIASWLVGLLLERGYTVKGTVRNPDDPKNAHLKALDGAAERLVLCKAD 302
Query: 471 LLDYDAICRAVQGCQGVFHTASPVTDDPEQMVEPAVRGTEYVINAAAEAGTVRRVVFTSS 650
LLDYDAIC AV+GC GVFHTASPVTDDPEQMVEPAVRGTEYVI+AAA+AGTVRRVVFTS
Sbjct: 303 LLDYDAICAAVEGCHGVFHTASPVTDDPEQMVEPAVRGTEYVIDAAADAGTVRRVVFTSC 482
Query: 651 IGAVTMDPKRGPDVVVDES 707
IG TMDP RGP VV S
Sbjct: 483 IGGGTMDPNRGPTWVVRSS 539
Score = 225 bits (486), Expect = 5e-058
Identities = 98/135 (72%), Positives = 100/135 (74%)
Frame = -2 / -2
Query: 697 TTTSGPRLGSMVTAPMDDVNTTRRTVPASAAALITYSVPRTAGSTICSGSSVTGEAVWKT 518
TT GPRLGSMV PM DVNTTRRTVPASAAA ITYSVP TAGSTICSGSSVTGEAVW T
Sbjct: 529 TTHVGPRLGSMVPPPMXDVNTTRRTVPASAAASITYSVPLTAGSTICSGSSVTGEAVWNT 350
Query: 517 PWQPCTXXXXXXXXXXXXXXXXXXXXAPSSALRCAFFGSSGFLTVPFTVYPFSSSSFTNH 338
PWQP T APSSA RCAFFGSSGFLTVP TV P S SS T+H
Sbjct: 349 PWQPSTAAQMAS*SRRSALQRTSLSAAPSSAFRCAFFGSSGFLTVPLTV*PLSRSSPTSH 170
Query: 337 EAMYPAAPVTHTVCP 293
+AMYPAAPVTHTVCP
Sbjct: 169 DAMYPAAPVTHTVCP 125
Score = 106 bits (227), Expect(2) = 1e-031
Identities = 44/64 (68%), Positives = 53/64 (82%)
Frame = -1 / -1
Query: 479 VQQIGLAEDQPLGGAVQRLEVRVLRVIWVPDGALHSVSLLEQQLHQPRGDVPGRAGHAHG 300
V+++GLAEDQPLGGAVQRL+V +LRVIWVP AL V+ L++Q +PR DVPG AG AHG
Sbjct: 311 VEEVGLAEDQPLGGAVQRLQVCILRVIWVPHCALDGVAPLQEQPDEPRRDVPGGAGDAHG 132
Query: 299 LPVP 288
LPVP
Sbjct: 131 LPVP 120
Score = 51.0 bits (105), Expect(2) = 1e-031
Identities = 19/29 (65%), Positives = 22/29 (75%)
Frame = -1 / -1
Query: 683 PALGVHGHGADGRREHHPPHRAGLRRRVD 597
PA+GVHG D REH+P H AG+RRRVD
Sbjct: 515 PAVGVHGAAPDAXREHNPAHGAGVRRRVD 429
>gb|BI958488.1|BI958488 HVSMEn0015E11f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0015E11f,
mRNA sequence
Length = 620
Score = 224 bits (484), Expect(2) = 1e-072
Identities = 93/122 (76%), Positives = 105/122 (86%)
Frame = +3 / +1
Query: 858 QATVNASIAHILKYLDGSARTFANAVQAYVDVRDVADAHLRVFESPRASGRHLCAERVLH 1037
Q TVNAS AHILKYLDGSAR +ANAVQAYVDVRDVA AHLRVFE+P+ASGR+LCAERVLH
Sbjct: 142 QPTVNASAAHILKYLDGSARKYANAVQAYVDVRDVAGAHLRVFEAPQASGRYLCAERVLH 321
Query: 1038 REDVVRILAKLFPEYPVPARCSDEVNPRKQPYKFSNQKLRDLGLQFRPVSQSLYDTVKNL 1217
R+DV IL+KLFP YPVP RCSD+VNP K PYK SN L+DLGL+F V+ SLYDTVK+L
Sbjct: 322 RQDVFHILSKLFP*YPVPTRCSDDVNPPKHPYKMSNSNLQDLGLKFTSVNHSLYDTVKSL 501
Query: 1218 QE 1223
+
Sbjct: 502 HD 507
Score = 145 bits (311), Expect(2) = 4e-049
Identities = 65/96 (67%), Positives = 66/96 (68%)
Frame = -2 / -1
Query: 1006 PDARGLSKTRRCASATSRTSTYACTALAKVRAEPSRYLRMCAMLAFTVACXXXXXXXXXX 827
P+A G SKTRRCA ATSRTSTYACTALA AEPSRYLRMCA LAFTV C
Sbjct: 290 PEAWGASKTRRCAPATSRTSTYACTALAYFLAEPSRYLRMCAALAFTVGCSSGPTTSTGF 111
Query: 826 XXXXXXXXXRAVSHAACSATALP*QYQFLVFSQNSR 719
A SHAACSATALP*QYQFLVF QNSR
Sbjct: 110 TTTRSTPRALAFSHAACSATALP*QYQFLVFLQNSR 3
Score = 84.5 bits (178), Expect(2) = 3e-021
Identities = 37/84 (44%), Positives = 52/84 (61%)
Frame = -1 / -3
Query: 1226 LLLEVLHRVVKRLADRPELQPQVPELLVGELVRLLPRIHLVGAPGWDGVLGEELXXXXXX 1047
++++ HR+V+R+ R EL+ ++ ++ VG LVR+L +H+V AP WDGVLGEEL
Sbjct: 510 VIMKAFHRIVQRVVHRSELEAKILQIRVGHLVRMLRWVHIVRAPCWDGVLGEELGEDVED 331
Query: 1046 XXXXXXXXXAEVAAGRAGALEDAE 975
AEVAAG G LED E
Sbjct: 330 VLAVQDALGAEVAAGGLGRLEDPE 259
Score = 70.7 bits (148), Expect(2) = 4e-049
Identities = 32/51 (62%), Positives = 34/51 (66%)
Frame = -2 / -1
Query: 1216 RFFTVS*SDWLTGRNCSPRSRSFWLENLYGCFRGFTSSEHLAGTGYSGKSL 1064
R FTVS +W T N PRS L+ L GCF GFTSSEHL GTGY GKSL
Sbjct: 500 RLFTVSYREWFTEVNLRPRSCRLELDIL*GCFGGFTSSEHLVGTGY*GKSL 348
Score = 70.3 bits (147), Expect(2) = 1e-072
Identities = 25/30 (83%), Positives = 27/30 (90%)
Frame = +3 / +1
Query: 717 DLEFCEKTRNWYCYGKAVAEHAAWETARRR 806
DLEFC+KT+NWYCYGKAVAE AAWE AR R
Sbjct: 1 DLEFCKKTKNWYCYGKAVAEQAAWEKARAR 90
Score = 38.2 bits (77), Expect(2) = 3e-021
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = -1 / -3
Query: 914 GRAVQVLEDVRDAGVHRRL 858
G AV+VLEDVR AGVHRRL
Sbjct: 198 GGAVEVLEDVRGAGVHRRL 142
>gb|AL505019.1|AL505019 AL505019 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW07C05V 5', mRNA sequence
Length = 610
Score = 198 bits (426), Expect(2) = 3e-072
Identities = 77/115 (66%), Positives = 97/115 (84%)
Frame = +3 / +1
Query: 291 NGQTVCVTGAAGYIASWLVKLLLEKGYTVKGTVRNPDDPKNAHLKALDGAAERLILCKAD 470
+G+TVCVTGA G+IASWLVK LL+KGYTV+GTVRNP DPKN HL+A DGAA+RL+L +AD
Sbjct: 73 HGRTVCVTGAGGFIASWLVKRLLQKGYTVRGTVRNPVDPKNDHLRAFDGAADRLVLLRAD 252
Query: 471 LLDYDAICRAVQGCQGVFHTASPVTDDPEQMVEPAVRGTEYVINAAAEAGTVRRV 635
L++ + + A GC+G+FH ASPVTDDPE+M+EPA+RGT+YVI AAA+ G R V
Sbjct: 253 LMEPETLVEAFTGCEGIFHAASPVTDDPEKMIEPAIRGTKYVITAAADMGIKRVV 417
Score = 136 bits (292), Expect(2) = 1e-038
Identities = 63/115 (54%), Positives = 70/115 (60%)
Frame = -2 / -3
Query: 634 TRRTVPASAAALITYSVPRTAGSTICSGSSVTGEAVWKTPWQPCTXXXXXXXXXXXXXXX 455
T R +P SAAA+ITY VPR AGS I SGSSVTGEA WK P QP
Sbjct: 416 TTRLMPMSAAAVITYLVPRIAGSIIFSGSSVTGEAAWKMPSQPVKASTRVSGSIRSARRR 237
Query: 454 XXXXXAPSSALRCAFFGSSGFLTVPFTVYPFSSSSFTNHEAMYPAAPVTHTVCPF 290
APS AL+ +FFGS+G TVP TVYPF T+HEAM P APVTHTV P+
Sbjct: 236 TRRSAAPSKALK*SFFGSTGLRTVPRTVYPFWRRRLTSHEAMKPPAPVTHTVRPW 72
Score = 95.5 bits (202), Expect(2) = 3e-072
Identities = 35/60 (58%), Positives = 45/60 (75%)
Frame = +3 / +1
Query: 624 VRRVVFTSSIGAVTMDPKRGPDVVVDESCWSDLEFCEKTRNWYCYGKAVAEHAAWETARR 803
++RVVFTS+IG V M+P R P VD++CWSDL++C+KT NW CY K VAE A ET R+
Sbjct: 403 IKRVVFTSTIGTVYMNPHRDPSKPVDDTCWSDLDYCKKTANWXCYAKTVAEQDALETGRQ 582
Score = 67.5 bits (141), Expect(2) = 5e-023
Identities = 36/65 (55%), Positives = 40/65 (61%)
Frame = -2 / -3
Query: 793 VSHAACSATALP*QYQFLVFSQNSRSLQHDSSTTTSGPRLGSMVTAPMDDVNTTRRTVPA 614
VS A+CSAT L *Q QF VF Q SRSLQ SST G G M T PM DV TTR +
Sbjct: 572 VSSASCSATVLA*QXQFAVFLQ*SRSLQQVSSTGLLGSLWGFMYTVPMVDVKTTRLMPMS 393
Query: 613 SAAAL 599
+AA +
Sbjct: 392 AAAVI 378
Score = 61.1 bits (127), Expect(2) = 5e-023
Identities = 28/59 (47%), Positives = 38/59 (64%)
Frame = -1 / -2
Query: 479 VQQIGLAEDQPLGGAVQRLEVRVLRVIWVPDGALHSVSLLEQQLHQPRGDVPGRAGHAH 303
+ +IG ED+ +GGAV+ +V VL + V +GA H V LLE+ L +PRGD AG AH
Sbjct: 261 LHKIGAEEDEAVGGAVKGSQVIVLWINRVANGASHGVPLLEEALDEPRGDEAAGAGDAH 85
Score = 44.1 bits (90), Expect(2) = 1e-038
Identities = 18/33 (54%), Positives = 24/33 (72%)
Frame = -1 / -2
Query: 731 AELEVAPARLVDHDVGPALGVHGHGADGRREHH 633
A ++VAPA ++D G +GVH H ADGRRE+H
Sbjct: 510 AVVKVAPAGVIDGLAGVPVGVHVHRADGRRENH 412
>gb|BI956546.1|BI956546 HVSMEn0004B08f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0004B08f, mRNA sequence
Length = 793
Score = 188 bits (406), Expect(3) = 7e-072
Identities = 79/102 (77%), Positives = 87/102 (85%)
Frame = +3 / +3
Query: 399 DDPKNAHLKALDGAAERLILCKADLLDYDAICRAVQGCQGVFHTASPVTDDPEQMVEPAV 578
DD KNAHL+AL GAAERL+LCKADLLD DA+ A+ GC GVFHTASPVTDDPE+MVEPAV
Sbjct: 189 DDAKNAHLRALAGAAERLVLCKADLLDADALRAAIAGCHGVFHTASPVTDDPEEMVEPAV 368
Query: 579 RGTEYVINAAAEAGTVRRVVFTSSIGAVTMDPKRGPDVVVDE 704
RGT YVI+AAAE+GTVRRV+ TSSIGAV MDP R PD DE
Sbjct: 369 RGTRYVIDAAAESGTVRRVLLTSSIGAVAMDPSRAPDAGGDE 494
Score = 137 bits (294), Expect(3) = 1e-048
Identities = 62/102 (60%), Positives = 65/102 (63%)
Frame = -2 / -1
Query: 703 SSTTTSGPRLGSMVTAPMDDVNTTRRTVPASAAALITYSVPRTAGSTICSGSSVTGEAVW 524
SS SG RLGSM TAPMDDV+ TRRTVP SAAA +T VP TAGSTI SGSSVTGEAVW
Sbjct: 493 SSPPASGARLGSMATAPMDDVSRTRRTVPDSAAASMT*RVPLTAGSTISSGSSVTGEAVW 314
Query: 523 KTPWQPCTXXXXXXXXXXXXXXXXXXXXAPSSALRCAFFGSS 398
KTPWQP AP+ ALRCAF SS
Sbjct: 313 KTPWQPAMAARSASASSRSALHSTSRSAAPARALRCAFLASS 188
Score = 73.0 bits (153), Expect(3) = 7e-072
Identities = 28/34 (82%), Positives = 31/34 (91%)
Frame = +3 / +1
Query: 291 NGQTVCVTGAAGYIASWLVKLLLEKGYTVKGTVR 392
+GQTVCVTGA GYI SW+VKLLLEKGY V+GTVR
Sbjct: 79 HGQTVCVTGAGGYIGSWIVKLLLEKGYAVRGTVR 180
Score = 59.7 bits (124), Expect(3) = 1e-048
Identities = 24/33 (72%), Positives = 25/33 (75%)
Frame = -2 / -3
Query: 391 LTVPFTVYPFSSSSFTNHEAMYPAAPVTHTVCP 293
LTVP T YPFSS S T H+ M P APVTHTVCP
Sbjct: 179 LTVPRTAYPFSSRSLTIHDPM*PPAPVTHTVCP 81
Score = 49.2 bits (101), Expect(3) = 7e-072
Identities = 16/22 (72%), Positives = 18/22 (81%)
Frame = +3 / +1
Query: 711 WSDLEFCEKTRNWYCYGKAVAE 776
WSDL FC+KT NW CYGK VA+
Sbjct: 502 WSDLGFCKKTENWCCYGKTVAD 567
Score = 35.4 bits (71), Expect(3) = 1e-048
Identities = 16/26 (61%), Positives = 19/26 (73%)
Frame = -2 / -3
Query: 790 SHAACSATALP*QYQFLVFSQNSRSL 713
S ++ SAT P*Q+QF VF QN RSL
Sbjct: 581 SESSGSATVFP*QHQFSVFLQNPRSL 504
>gb|BQ763022.1|BQ763022 EBro02_SQ006_M20_R root, 3 week, hydroponic grown, low nitrogen, cv
Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone
EBro02_SQ006_M20 5', mRNA sequence
Length = 626
Score = 127 bits (271), Expect(3) = 1e-067
Identities = 47/68 (69%), Positives = 57/68 (83%)
Frame = +3 / +1
Query: 555 EQMVEPAVRGTEYVINAAAEAGTVRRVVFTSSIGAVTMDPKRGPDVVVDESCWSDLEFCE 734
++M+EPAV GT VINAAA+ G++RRVV TSSIGAV MDP+R PD DE+CWSDLEFC+
Sbjct: 421 KKMIEPAVSGTRNVINAAADVGSIRRVVMTSSIGAVYMDPRRSPDEEADETCWSDLEFCK 600
Query: 735 KTRNWYCY 758
T+NWYCY
Sbjct: 601 NTKNWYCY 624
Score = 104 bits (222), Expect(3) = 4e-044
Identities = 48/66 (72%), Positives = 53/66 (80%)
Frame = -2 / -1
Query: 757 *QYQFLVFSQNSRSLQHDSSTTTSGPRLGSMVTAPMDDVNTTRRTVPASAAALITYSVPR 578
*QYQF VF QNSRSLQH SS ++SG R GSM TAP+DDV TTRR +P SAAALIT+ VP
Sbjct: 623 *QYQFFVFLQNSRSLQHVSSASSSGLRRGSMYTAPIDDVITTRRMLPTSAAALITFLVPL 444
Query: 577 TAGSTI 560
TAGS I
Sbjct: 443 TAGSII 426
Score = 88.1 bits (186), Expect(3) = 1e-067
Identities = 35/54 (64%), Positives = 43/54 (79%)
Frame = +3 / +3
Query: 399 DDPKNAHLKALDGAAERLILCKADLLDYDAICRAVQGCQGVFHTASPVTDDPEQ 560
D +NAHLK L+GAAERL L + DLLD +++ A +GCQGVFHTA PVTDDPE+
Sbjct: 264 DVARNAHLKGLEGAAERLTLFRVDLLDKESLVAAFRGCQGVFHTACPVTDDPEK 425
Score = 81.7 bits (172), Expect(3) = 1e-067
Identities = 32/37 (86%), Positives = 34/37 (91%)
Frame = +3 / +3
Query: 294 GQTVCVTGAAGYIASWLVKLLLEKGYTVKGTVRNPDD 404
G+TVCVTGA G+IASWLVKLLLEKGY V GTVRNPDD
Sbjct: 156 GRTVCVTGAGGFIASWLVKLLLEKGYAVHGTVRNPDD 266
Score = 60.2 bits (125), Expect(3) = 4e-044
Identities = 25/37 (67%), Positives = 28/37 (75%)
Frame = -2 / -2
Query: 403 SSGFLTVPFTVYPFSSSSFTNHEAMYPAAPVTHTVCP 293
SSGF TVP+T PFS S T+H+AM P APVTHTV P
Sbjct: 265 SSGFRTVPWTA*PFSRRSLTSHDAMKPPAPVTHTVRP 155
Score = 52.8 bits (109), Expect(3) = 4e-044
Identities = 22/53 (41%), Positives = 23/53 (43%)
Frame = -2 / -2
Query: 556 SGSSVTGEAVWKTPWQPCTXXXXXXXXXXXXXXXXXXXXAPSSALRCAFFGSS 398
SGSSVTG AVW TPW P APS RCAF +S
Sbjct: 421 SGSSVTGHAVWNTPWHPRNAATRLSLSSRSTRKRVSRSAAPSKPFRCAFLATS 263
>gb|AL503986.1|AL503986 AL503986 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW01C19V 5', mRNA sequence
Length = 614
Score = 198 bits (426), Expect(3) = 1e-065
Identities = 77/115 (66%), Positives = 97/115 (84%)
Frame = +3 / +1
Query: 291 NGQTVCVTGAAGYIASWLVKLLLEKGYTVKGTVRNPDDPKNAHLKALDGAAERLILCKAD 470
+G+TVCVTGA G+IASWLVK LL+KGYTV+GTVRNP DPKN HL+A DGAA+RL+L +AD
Sbjct: 67 HGRTVCVTGAGGFIASWLVKRLLQKGYTVRGTVRNPVDPKNDHLRAFDGAADRLVLLRAD 246
Query: 471 LLDYDAICRAVQGCQGVFHTASPVTDDPEQMVEPAVRGTEYVINAAAEAGTVRRV 635
L++ + + A GC+G+FH ASPVTDDPE+M+EPA+RGT+YVI AAA+ G R V
Sbjct: 247 LMEPETLVEAFTGCEGIFHAASPVTDDPEKMIEPAIRGTKYVITAAADMGIKRVV 411
Score = 136 bits (292), Expect(3) = 1e-041
Identities = 63/115 (54%), Positives = 70/115 (60%)
Frame = -2 / -1
Query: 634 TRRTVPASAAALITYSVPRTAGSTICSGSSVTGEAVWKTPWQPCTXXXXXXXXXXXXXXX 455
T R +P SAAA+ITY VPR AGS I SGSSVTGEA WK P QP
Sbjct: 410 TTRLMPMSAAAVITYLVPRIAGSIIFSGSSVTGEAAWKMPSQPVKASTRVSGSIRSARRR 231
Query: 454 XXXXXAPSSALRCAFFGSSGFLTVPFTVYPFSSSSFTNHEAMYPAAPVTHTVCPF 290
APS AL+ +FFGS+G TVP TVYPF T+HEAM P APVTHTV P+
Sbjct: 230 TRRSAAPSKALK*SFFGSTGLRTVPRTVYPFWRRRLTSHEAMKPPAPVTHTVRPW 66
Score = 57.4 bits (119), Expect(3) = 1e-065
Identities = 17/25 (68%), Positives = 22/25 (88%)
Frame = +3 / +3
Query: 702 ESCWSDLEFCEKTRNWYCYGKAVAE 776
++CWSDL++C+KT NWYCY K VAE
Sbjct: 477 DTCWSDLDYCKKTANWYCYAKTVAE 551
Score = 39.6 bits (80), Expect(3) = 1e-041
Identities = 19/26 (73%), Positives = 19/26 (73%)
Frame = -2 / -2
Query: 778 CSATALP*QYQFLVFSQNSRSLQHDS 701
CSAT L *QYQF VF Q SRSLQ S
Sbjct: 553 CSATVLA*QYQFAVFLQ*SRSLQQVS 476
Score = 34.5 bits (69), Expect(3) = 1e-065
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +3 / +1
Query: 624 VRRVVFTSSIGAVTMDPKRGP 686
++RVVFTS+IG V M+P R P
Sbjct: 397 IKRVVFTSTIGTVYMNPHRDP 459
Score = 33.1 bits (66), Expect(3) = 1e-041
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = -1 / -3
Query: 689 VGPALGVHGHGADGRREHH 633
+G +GVH H ADGRRE+H
Sbjct: 462 LGVPVGVHVHRADGRRENH 406
>gb|BQ763205.1|BQ763205 EBro02_SQ007_F14_R root, 3 week, hydroponic grown, low nitrogen, cv
Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone
EBro02_SQ007_F14 5', mRNA sequence
Length = 426
Score = 239 bits (517), Expect = 2e-062
Identities = 108/140 (77%), Positives = 108/140 (77%)
Frame = -2 / -2
Query: 1000 ARGLSKTRRCASATSRTSTYACTALAKVRAEPSRYLRMCAMLAFTVACXXXXXXXXXXXX 821
A G SKTRRCA ATSRTSTYACTALA AEPSRYLRMCA LAFTV C
Sbjct: 425 AWGASKTRRCAPATSRTSTYACTALAYFLAEPSRYLRMCAALAFTVGCSSGPTTSTGFTT 246
Query: 820 XXXXXXXRAVSHAACSATALP*QYQFLVFSQNSRSLQHDSSTTTSGPRLGSMVTAPMDDV 641
A SHAACSATALP*QYQFLVF QNSRSLQ DSSTTTSGPRLGSMVTAPMDDV
Sbjct: 245 TRSTPRALAFSHAACSATALP*QYQFLVFLQNSRSLQQDSSTTTSGPRLGSMVTAPMDDV 66
Query: 640 NTTRRTVPASAAALITYSVP 581
NTTRRTVPASAAA ITYSVP
Sbjct: 65 NTTRRTVPASAAASITYSVP 6
Score = 174 bits (374), Expect(2) = 3e-065
Identities = 69/77 (89%), Positives = 73/77 (94%)
Frame = +3 / +1
Query: 576 VRGTEYVINAAAEAGTVRRVVFTSSIGAVTMDPKRGPDVVVDESCWSDLEFCEKTRNWYC 755
VRGTEYVI+AAA+AGTVRRVVFTSSIGAVTMDP RGPDVVVDESCWSDLEFC+KT+NWYC
Sbjct: 1 VRGTEYVIDAAADAGTVRRVVFTSSIGAVTMDPNRGPDVVVDESCWSDLEFCKKTKNWYC 180
Query: 756 YGKAVAEHAAWETARRR 806
YGKAVAE AAWE AR R
Sbjct: 181 YGKAVAEQAAWEKARAR 231
Score = 95.9 bits (203), Expect(2) = 3e-065
Identities = 41/48 (85%), Positives = 43/48 (89%)
Frame = +3 / +1
Query: 858 QATVNASIAHILKYLDGSARTFANAVQAYVDVRDVADAHLRVFESPRA 1001
Q TVNAS AHILKYLDGSAR +ANAVQAYVDVRDVA AHLRVFE+P A
Sbjct: 283 QPTVNASAAHILKYLDGSARKYANAVQAYVDVRDVAGAHLRVFEAPHA 426
Score = 93.2 bits (197), Expect(2) = 8e-024
Identities = 37/48 (77%), Positives = 42/48 (87%)
Frame = -1 / -1
Query: 740 GFLAELEVAPARLVDHDVGPALGVHGHGADGRREHHPPHRAGLRRRVD 597
GFLAEL++APA LVD VGPA+GVHG GADGRREH+P H AG+RRRVD
Sbjct: 165 GFLAELKIAPAGLVDDHVGPAVGVHGDGADGRREHNPAHGAGVRRRVD 22
Score = 38.2 bits (77), Expect(2) = 8e-024
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = -1 / -1
Query: 914 GRAVQVLEDVRDAGVHRRL 858
G AV+VLEDVR AGVHRRL
Sbjct: 339 GGAVEVLEDVRGAGVHRRL 283
>gb|BI777845.2|BI777845 EBro08_SQ002_E16_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ002_E16 5', mRNA sequence
Length = 601
Score = 186 bits (400), Expect(2) = 1e-064
Identities = 75/115 (65%), Positives = 90/115 (78%)
Frame = +3 / +2
Query: 399 DDPKNAHLKALDGAAERLILCKADLLDYDAICRAVQGCQGVFHTASPVTDDPEQMVEPAV 578
D +NAHL+ L+GAAERL L + DLLD +++ A +GCQGVFHTA PVTDDPE+M+EPAV
Sbjct: 248 DVARNAHLRGLEGAAERLTLFRVDLLDKESLVAAFRGCQGVFHTACPVTDDPEKMIEPAV 427
Query: 579 RGTEYVINAAAEAGTVRRVVFTSSIGAVTMDPKRGPDVVVDESCWSDLEFCEKTR 743
GT VINAAAE +RRVV TSSIGA+ MDP+R PD DE+CWSDLEFC+ R
Sbjct: 428 SGTRNVINAAAEVDGIRRVVMTSSIGAIYMDPRRSPDEEADETCWSDLEFCKTQR 592
Score = 133 bits (284), Expect(2) = 3e-042
Identities = 62/111 (55%), Positives = 67/111 (60%)
Frame = -2 / -2
Query: 730 QNSRSLQHDSSTTTSGPRLGSMVTAPMDDVNTTRRTVPASAAALITYSVPRTAGSTICSG 551
QNSRSLQH SS ++SG R GSM AP+DDV TTRR SAAALIT+ VP TAGS I SG
Sbjct: 579 QNSRSLQHVSSASSSGLRRGSMYMAPIDDVITTRRMPSTSAAALITFLVPLTAGSIIFSG 400
Query: 550 SSVTGEAVWKTPWQPCTXXXXXXXXXXXXXXXXXXXXAPSSALRCAFFGSS 398
SSVTG AVW TPW P APS LRCAF +S
Sbjct: 399 SSVTGHAVWNTPWHPRNAATRLSLSSRSTRKRVSRSAAPSKPLRCAFLATS 247
Score = 81.7 bits (172), Expect(2) = 1e-064
Identities = 32/37 (86%), Positives = 34/37 (91%)
Frame = +3 / +2
Query: 294 GQTVCVTGAAGYIASWLVKLLLEKGYTVKGTVRNPDD 404
G+TVCVTGA G+IASWLVKLLLEKGY V GTVRNPDD
Sbjct: 140 GRTVCVTGAGGFIASWLVKLLLEKGYAVHGTVRNPDD 250
Score = 60.2 bits (125), Expect(2) = 3e-042
Identities = 25/37 (67%), Positives = 28/37 (75%)
Frame = -2 / -2
Query: 403 SSGFLTVPFTVYPFSSSSFTNHEAMYPAAPVTHTVCP 293
SSGF TVP+T PFS S T+H+AM P APVTHTV P
Sbjct: 249 SSGFRTVPWTA*PFSRRSLTSHDAMKPPAPVTHTVRP 139
>gb|BJ450530.1|BJ450530 BJ450530 K. Sato unpublished cDNA library, cv. Akashinriki vegetative
stage leaves Hordeum vulgare subsp. vulgare cDNA clone
baak30a24 5', mRNA sequence
Length = 439
Score = 247 bits (533), Expect = 2e-064
Identities = 102/126 (80%), Positives = 112/126 (88%)
Frame = +3 / +3
Query: 864 TVNASIAHILKYLDGSARTFANAVQAYVDVRDVADAHLRVFESPRASGRHLCAERVLHRE 1043
TVNAS AH LKYLDGSAR +ANAVQA VDVRDV AHLRVFE+P+ASGR+LCAERVLHR+
Sbjct: 3 TVNASAAHXLKYLDGSARKYANAVQAXVDVRDVXGAHLRVFEAPQASGRYLCAERVLHRQ 182
Query: 1044 DVVRILAKLFPEYPVPARCSDEVNPRKQPYKFSNQKLRDLGLQFRPVSQSLYDTVKNLQE 1223
DVV ILAKLFPEY VP RC DEVNPRKQPYK SNQKL+DLGL+F PV+ SLY+TVK+LQE
Sbjct: 183 DVVHILAKLFPEYXVPTRCXDEVNPRKQPYKMSNQKLQDLGLKFTPVNDSLYETVKSLQE 362
Query: 1224 KGHLPV 1241
KGH PV
Sbjct: 363 KGHXPV 380
Score = 101 bits (215), Expect(2) = 4e-024
Identities = 48/89 (53%), Positives = 56/89 (62%)
Frame = -1 / -3
Query: 1241 HRQVSLLLEVLHRVVKRLADRPELQPQVPELLVGELVRLLPRIHLVGAPGWDGVLGEELX 1062
HR V LLL LHR+V+R+ R EL+ ++ +LLVG LVRLLP +HLV AP WD VLGEEL
Sbjct: 380 HRXVPLLLXALHRLVQRVVHRSELEAKILQLLVGHLVRLLPWVHLVXAPCWDXVLGEELG 201
Query: 1061 XXXXXXXXXXXXXXAEVAAGRAGALEDAE 975
AEVAAG G LED E
Sbjct: 200 ENVDDVLAVQDALGAEVAAGGLGRLEDPE 114
Score = 95.9 bits (203), Expect(2) = 2e-038
Identities = 41/59 (69%), Positives = 43/59 (72%)
Frame = -2 / -1
Query: 1240 TGRCPFSWRFFTVS*SDWLTGRNCSPRSRSFWLENLYGCFRGFTSSEHLAGTGYSGKSL 1064
TG CPFS R FTVS + TG N PRS SFWL+ L GCFRGFTSS HL GT YSGKSL
Sbjct: 379 TGXCPFSXRLFTVSYRESFTGVNLRPRSCSFWLDIL*GCFRGFTSSXHLVGTXYSGKSL 203
Score = 84.5 bits (178), Expect(2) = 2e-038
Identities = 37/48 (77%), Positives = 38/48 (79%)
Frame = -2 / -1
Query: 1006 PDARGLSKTRRCASATSRTSTYACTALAKVRAEPSRYLRMCAMLAFTV 863
P+A G SKTRRCA TSRTST ACTALA AEPSRYL MCA LAFTV
Sbjct: 145 PEAWGASKTRRCAPXTSRTSTXACTALAYFLAEPSRYLXMCAALAFTV 2
Score = 30.9 bits (61), Expect(2) = 4e-024
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1 / -3
Query: 914 GRAVQVLEDVRDAGVHR 864
G AV+VLE VR AGVHR
Sbjct: 53 GGAVEVLEXVRGAGVHR 3
>gb|BI959591.1|BI959591 HVSMEn0020F03f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0020F03f, mRNA sequence
Length = 646
Score = 246 bits (531), Expect = 3e-064
Identities = 99/111 (89%), Positives = 106/111 (95%)
Frame = +3 / +1
Query: 291 NGQTVCVTGAAGYIASWLVKLLLEKGYTVKGTVRNPDDPKNAHLKALDGAAERLILCKAD 470
+GQTVCVTGAAGYIA WLVKLLLE+GYTVKGTVRNPDDPKNAHLKALDGAAERL+LCKAD
Sbjct: 133 HGQTVCVTGAAGYIAWWLVKLLLERGYTVKGTVRNPDDPKNAHLKALDGAAERLVLCKAD 312
Query: 471 LLDYDAICRAVQGCQGVFHTASPVTDDPEQMVEPAVRGTEYVINAAAEAGT 623
LLDYDAIC AV+GC GVFHTASPVTDDPEQMVEPA RGTEYVI+A A+AG+
Sbjct: 313 LLDYDAICAAVEGCHGVFHTASPVTDDPEQMVEPAARGTEYVIDAGADAGS 465
Score = 175 bits (377), Expect = 5e-043
Identities = 75/109 (68%), Positives = 76/109 (69%)
Frame = -2 / -3
Query: 619 PASAAALITYSVPRTAGSTICSGSSVTGEAVWKTPWQPCTXXXXXXXXXXXXXXXXXXXX 440
PASA A ITYSVP AGSTICSGSSVTGEAVW TPWQP T
Sbjct: 461 PASAPASITYSVPLAAGSTICSGSSVTGEAVWNTPWQPSTAAQMAS*SRRSALQRTSLSA 282
Query: 439 APSSALRCAFFGSSGFLTVPFTVYPFSSSSFTNHEAMYPAAPVTHTVCP 293
APSSA RCAFFGSSGFLTVP TV P S SS T+H AMYPAAPVTHTVCP
Sbjct: 281 APSSAFRCAFFGSSGFLTVPLTV*PLSRSSLTSHHAMYPAAPVTHTVCP 135
Score = 106 bits (227), Expect = 2e-022
Identities = 44/64 (68%), Positives = 53/64 (82%)
Frame = -1 / -2
Query: 479 VQQIGLAEDQPLGGAVQRLEVRVLRVIWVPDGALHSVSLLEQQLHQPRGDVPGRAGHAHG 300
V+++GLAEDQPLGGAVQRL+V +LRVIWVP AL V+ L++QL +P DVPG AG AHG
Sbjct: 321 VEEVGLAEDQPLGGAVQRLQVCILRVIWVPHCALDGVAPLQEQLDEPPRDVPGGAGDAHG 142
Query: 299 LPVP 288
LPVP
Sbjct: 141 LPVP 130
>gb|BG369168.1|BG369168 HVSMEi0022M03f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0022M03f, mRNA sequence
Length = 828
Score = 193 bits (417), Expect(2) = 1e-063
Identities = 76/115 (66%), Positives = 96/115 (83%)
Frame = +3 / +2
Query: 291 NGQTVCVTGAAGYIASWLVKLLLEKGYTVKGTVRNPDDPKNAHLKALDGAAERLILCKAD 470
+G+TVCVTGA G+IASWLVK LL+KGYTV+GTVRNP DPKN HL+A DGAA+RL+L +AD
Sbjct: 74 HGRTVCVTGAGGFIASWLVKRLLQKGYTVRGTVRNPVDPKNDHLRAFDGAADRLVLLRAD 253
Query: 471 LLDYDAICRAVQGCQGVFHTASPVTDDPEQMVEPAVRGTEYVINAAAEAGTVRRV 635
L++ + + A GC+G+FH ASPVTDDPE+M+EPA+RGT+ VI AAA+ G R V
Sbjct: 254 LMEPETLVEAFTGCEGIFHAASPVTDDPEKMIEPAIRGTKCVITAAADMGIKRVV 418
Score = 134 bits (287), Expect(2) = 1e-034
Identities = 62/115 (53%), Positives = 70/115 (60%)
Frame = -2 / -1
Query: 634 TRRTVPASAAALITYSVPRTAGSTICSGSSVTGEAVWKTPWQPCTXXXXXXXXXXXXXXX 455
T R +P SAAA+IT+ VPR AGS I SGSSVTGEA WK P QP
Sbjct: 417 TTRLMPMSAAAVITHLVPRIAGSIIFSGSSVTGEAAWKMPSQPVKASTRVSGSIRSARRR 238
Query: 454 XXXXXAPSSALRCAFFGSSGFLTVPFTVYPFSSSSFTNHEAMYPAAPVTHTVCPF 290
APS AL+ +FFGS+G TVP TVYPF T+HEAM P APVTHTV P+
Sbjct: 237 TRRSAAPSKALK*SFFGSTGLRTVPRTVYPFWRRRLTSHEAMKPPAPVTHTVRPW 73
Score = 70.7 bits (148), Expect(2) = 1e-063
Identities = 25/44 (56%), Positives = 34/44 (77%)
Frame = +3 / +2
Query: 624 VRRVVFTSSIGAVTMDPKRGPDVVVDESCWSDLEFCEKTRNWYC 755
++RVVFT +IGA M+P R P VD++CWSDL++CEKT +W C
Sbjct: 404 IKRVVFTLTIGAGFMNPHRDPGEPVDDACWSDLDYCEKTGDWCC 535
Score = 33.6 bits (67), Expect(2) = 1e-034
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = -1 / -3
Query: 743 PGFLAELEVAPARLVDHDVGPALGVHGHGADGRREHH 633
P ++VAPA ++ G +GVH ADG+R++H
Sbjct: 523 PCLFTVVQVAPAGVIHGLAGVPVGVHEPRADGQRKNH 413
>gb|BI957975.1|BI957975 HVSMEn0012L23f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0012L23f, mRNA sequence
Length = 455
Score = 243 bits (525), Expect = 2e-063
Identities = 100/126 (79%), Positives = 113/126 (89%)
Frame = +3 / +1
Query: 291 NGQTVCVTGAAGYIASWLVKLLLEKGYTVKGTVRNPDDPKNAHLKALDGAAERLILCKAD 470
+GQTVCVTGA GYI SWLVKLLL+KGY V+GTVRNPDD KNAHL+AL GAAERL+LCKAD
Sbjct: 76 HGQTVCVTGAGGYIGSWLVKLLLDKGYAVRGTVRNPDDAKNAHLRALAGAAERLVLCKAD 255
Query: 471 LLDYDAICRAVQGCQGVFHTASPVTDDPEQMVEPAVRGTEYVINAAAEAGTVRRVVFTSS 650
LLD DA+ +A+ GC GVFHTASPVTDDPE+MVEPAVRGT +I+AAAE+GTVRRVV TSS
Sbjct: 256 LLDGDALRQAIAGCHGVFHTASPVTDDPEEMVEPAVRGTLNIIDAAAESGTVRRVVLTSS 435
Query: 651 IGAVTM 668
IGA+ M
Sbjct: 436 IGAIAM 453
Score = 183 bits (395), Expect = 2e-045
Identities = 79/127 (62%), Positives = 86/127 (67%)
Frame = -2 / -1
Query: 670 SMVTAPMDDVNTTRRTVPASAAALITYSVPRTAGSTICSGSSVTGEAVWKTPWQPCTXXX 491
SM APMDDV+TTRRTVP SAAA + SVP TAGSTI SGSSVTG+AVWKTPWQP
Sbjct: 455 SMAIAPMDDVSTTRRTVPDSAAASMMLSVPLTAGSTISSGSSVTGDAVWKTPWQPAMAWR 276
Query: 490 XXXXXXXXXXXXXXXXXAPSSALRCAFFGSSGFLTVPFTVYPFSSSSFTNHEAMYPAAPV 311
AP+ ALRCAFF SSGFLTVP T YP S S T+H+ M P APV
Sbjct: 275 SASPSSRSALHSTSLSAAPARALRCAFFASSGFLTVPRTAYPLSRRSLTSHDPM*PPAPV 96
Query: 310 THTVCPF 290
THTVCP+
Sbjct: 95 THTVCPW 75
Score = 91.8 bits (194), Expect(2) = 5e-025
Identities = 40/66 (60%), Positives = 49/66 (74%)
Frame = -1 / -3
Query: 479 VQQIGLAEDQPLGGAVQRLEVRVLRVIWVPDGALHSVSLLEQQLHQPRGDVPGRAGHAHG 300
V+Q+GLA+ QPL A + +VRVLRVI VPDGA H V L+E++L +PR DV AGHAH
Sbjct: 264 VEQVGLAQHQPLRRAGESPQVRVLRVIGVPDGASHGVPLVEEELDEPRPDVAAGAGHAHR 85
Query: 299 LPVPRR 282
LPV RR
Sbjct: 84 LPVARR 67
Score = 43.7 bits (89), Expect(2) = 5e-025
Identities = 17/24 (70%), Positives = 18/24 (75%)
Frame = -1 / -3
Query: 668 HGHGADGRREHHPPHRAGLRRRVD 597
HG ADGRR+H RAGLRRRVD
Sbjct: 453 HGDSADGRRQHDAADRAGLRRRVD 382
>gb|BF263684.3|BF263684 HV_CEa0007G07f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0007G07f, mRNA sequence
Length = 437
Score = 242 bits (523), Expect = 4e-063
Identities = 100/123 (81%), Positives = 110/123 (89%)
Frame = +3 / +1
Query: 300 TVCVTGAAGYIASWLVKLLLEKGYTVKGTVRNPDDPKNAHLKALDGAAERLILCKADLLD 479
TVCVTGA GYI SW+VKLLLEKGY V+GTVRNPDD KNAHL+AL GAAERL+LCKADLLD
Sbjct: 67 TVCVTGAGGYIGSWIVKLLLEKGYAVRGTVRNPDDAKNAHLRALAGAAERLVLCKADLLD 246
Query: 480 YDAICRAVQGCQGVFHTASPVTDDPEQMVEPAVRGTEYVINAAAEAGTVRRVVFTSSIGA 659
DA+ A+ GC GVFHTASPVTDDPE+MVEPAVRGT YVI+AAA++GTVRRVV TSSIGA
Sbjct: 247 GDALRAAIAGCHGVFHTASPVTDDPEEMVEPAVRGTRYVIDAAAQSGTVRRVVLTSSIGA 426
Query: 660 VTM 668
V M
Sbjct: 427 VAM 435
Score = 178 bits (383), Expect = 8e-044
Identities = 79/125 (63%), Positives = 83/125 (66%)
Frame = -2 / -1
Query: 670 SMVTAPMDDVNTTRRTVPASAAALITYSVPRTAGSTICSGSSVTGEAVWKTPWQPCTXXX 491
SM TAPMDDV+TTRRTVP AAA +T VP TAGSTI SGSSVTGEAVW TPWQP
Sbjct: 437 SMATAPMDDVSTTRRTVPDWAAASMT*RVPLTAGSTISSGSSVTGEAVWNTPWQPAMAAR 258
Query: 490 XXXXXXXXXXXXXXXXXAPSSALRCAFFGSSGFLTVPFTVYPFSSSSFTNHEAMYPAAPV 311
AP+ ALRCAFF SSGFLTVP T YPFSS S T + M P APV
Sbjct: 257 SASPSSRSALHSTSRSAAPARALRCAFFASSGFLTVPRTAYPFSSRSLTIQDPM*PPAPV 78
Query: 310 THTVC 296
THTVC
Sbjct: 77 THTVC 63
Score = 94.5 bits (200), Expect(2) = 3e-025
Identities = 40/65 (61%), Positives = 48/65 (73%)
Frame = -1 / -3
Query: 479 VQQIGLAEDQPLGGAVQRLEVRVLRVIWVPDGALHSVSLLEQQLHQPRGDVPGRAGHAHG 300
V+Q+GLA+ QPL A + +VRVLRVIWVPDGA H V LL+Q+L PR DV AGHAH
Sbjct: 246 VEQVGLAQHQPLRRAGESPQVRVLRVIWVPDGASHGVPLLQQELDDPRPDVAAGAGHAHR 67
Query: 299 LPVPR 285
+PV R
Sbjct: 66 VPVSR 52
Score = 41.4 bits (84), Expect(2) = 3e-025
Identities = 17/24 (70%), Positives = 17/24 (70%)
Frame = -1 / -3
Query: 668 HGHGADGRREHHPPHRAGLRRRVD 597
HG GADGRREH RAGL R VD
Sbjct: 435 HGDGADGRREHDAADRAGLGRGVD 364
>gb|BM375203.2|BM375203 EBem06_SQ002_K13_R embryo, 21 DPA, no treatment, cv Optic, EBem06
Hordeum vulgare subsp. vulgare cDNA clone
EBem06_SQ002_K13 5', mRNA sequence
Length = 546
Score = 117 bits (251), Expect(3) = 3e-057
Identities = 44/73 (60%), Positives = 58/73 (79%)
Frame = +3 / +2
Query: 1008 RHLCAERVLHREDVVRILAKLFPEYPVPARCSDEVNPRKQPYKFSNQKLRDLGLQFRPVS 1187
R++CAER LHR ++ RILA LFPEYP+P RC DEVNP K+ YK++NQ L+DL ++F PV
Sbjct: 326 RYVCAERTLHRGELCRILAGLFPEYPIPTRCKDEVNPPKKGYKYTNQPLKDLSMKFTPVQ 505
Query: 1188 QSLYDTVKNLQEK 1226
+ LY+ V +LQEK
Sbjct: 506 EYLYEAVNSLQEK 544
Score = 93.6 bits (198), Expect(2) = 2e-028
Identities = 49/107 (45%), Positives = 54/107 (50%)
Frame = -2 / -1
Query: 1006 PDARGLSKTRRCASATSRTSTYACTALAKVRAEPSRYLRMCAMLAFTVACXXXXXXXXXX 827
P A G T CASA S T T AC +L A P RYL MC +L F + C
Sbjct: 321 PPALGAWSTLTCASAASLTCT*ACDSLTYALASPVRYLSMCLVLVFILGCSSSPSVTTGI 142
Query: 826 XXXXXXXXXRAVSHAACSATALP*QYQFLVFSQNSRSLQHDSSTTTS 686
RA SHA SA L *QYQFLV Q SRSLQH+SS+ S
Sbjct: 141 TTARSSPSDRAASHAPRSAIVLA*QYQFLVCLQ*SRSLQHESSSGAS 1
Score = 76.2 bits (160), Expect(3) = 3e-057
Identities = 23/38 (60%), Positives = 31/38 (81%)
Frame = +3 / +2
Query: 687 DVVVDESCWSDLEFCEKTRNWYCYGKAVAEHAAWETAR 800
D +D+SCWSDL++C++T+NWYCY K +AE AWE AR
Sbjct: 2 DAPLDDSCWSDLDYCKQTKNWYCYAKTIAERGAWEAAR 115
Score = 68.0 bits (142), Expect(3) = 3e-057
Identities = 26/51 (50%), Positives = 35/51 (68%)
Frame = +3 / +2
Query: 858 QATVNASIAHILKYLDGSARTFANAVQAYVDVRDVADAHLRVFESPRASGR 1010
Q ++N S HILKYL G A+ + N AYV V+D A+AH+RV ++P A GR
Sbjct: 173 QPSMNTSTKHILKYLTGEAKAYVNESHAYVHVKDAAEAHVRVLQAPNAGGR 325
Score = 53.3 bits (110), Expect(2) = 2e-028
Identities = 29/53 (54%), Positives = 29/53 (54%)
Frame = -2 / -1
Query: 1228 PFSWRFFTVS*SDWLTGRNCSPRSRSFWLENLYGCFRGFTSSEHLAGTGYSGK 1070
PFS R FT S* TG N RS W L F GFTSS HL G GYSGK
Sbjct: 546 PFSCREFTAS*RYSCTGVNFMLRSLRGWFVYL*PFFGGFTSSLHLVGMGYSGK 388
>gb|BU975402.1|BU975402 HB31A09r BC Hordeum vulgare subsp. vulgare cDNA clone HB31A09
5-PRIME, mRNA sequence
Length = 557
Score = 134 bits (288), Expect(2) = 2e-053
Identities = 53/71 (74%), Positives = 61/71 (85%)
Frame = +3 / +1
Query: 1029 VLHREDVVRILAKLFPEYPVPARCSDEVNPRKQPYKFSNQKLRDLGLQFRPVSQSLYDTV 1208
VLHREDVV IL K FPEYP+P+RCSD VNPRK+PYK SNQ+LR+LGL+F PV+Q LYDTV
Sbjct: 226 VLHREDVVTILRKFFPEYPIPSRCSDSVNPRKRPYKMSNQRLRELGLEFTPVAQCLYDTV 405
Query: 1209 KNLQEKGHLPV 1241
+ QEKG LPV
Sbjct: 406 VSFQEKGILPV 438
Score = 95.9 bits (203), Expect(2) = 2e-053
Identities = 38/54 (70%), Positives = 46/54 (85%)
Frame = +3 / +1
Query: 858 QATVNASIAHILKYLDGSARTFANAVQAYVDVRDVADAHLRVFESPRASGRHLC 1019
Q VNAS+ H+LKYLDGSA+T+ANAVQAYV VRD A AH+ VFE+P A+GR+LC
Sbjct: 49 QPAVNASLTHVLKYLDGSAKTYANAVQAYVHVRDTAAAHVLVFEAPAAAGRYLC 210
Score = 86.8 bits (183), Expect(2) = 4e-035
Identities = 37/59 (62%), Positives = 40/59 (67%)
Frame = -2 / -1
Query: 1240 TGRCPFSWRFFTVS*SDWLTGRNCSPRSRSFWLENLYGCFRGFTSSEHLAGTGYSGKSL 1064
TGR PFSW+ TVS* TG N P SRS W + LYG F GFT SEHL G GYSGK+L
Sbjct: 437 TGRMPFSWKLTTVS*RHCATGVNSRPSSRSRWFDILYGRFLGFTESEHLLGMGYSGKNL 261
Score = 82.6 bits (174), Expect(2) = 4e-035
Identities = 35/50 (70%), Positives = 36/50 (72%)
Frame = -2 / -1
Query: 1006 PDARGLSKTRRCASATSRTSTYACTALAKVRAEPSRYLRMCAMLAFTVAC 857
P A G SKTR CA+A SRT TYACTALA V AEPSRYL C LAFT C
Sbjct: 197 PAAAGASKTRTCAAAVSRTCTYACTALAYVLAEPSRYLSTCVRLAFTAGC 48
>gb|BU975696.1|BU975696 HB32A09r BC Hordeum vulgare subsp. vulgare cDNA clone HB32A09
5-PRIME, mRNA sequence
Length = 559
Score = 134 bits (288), Expect(2) = 2e-053
Identities = 53/71 (74%), Positives = 61/71 (85%)
Frame = +3 / +1
Query: 1029 VLHREDVVRILAKLFPEYPVPARCSDEVNPRKQPYKFSNQKLRDLGLQFRPVSQSLYDTV 1208
VLHREDVV IL K FPEYP+P+RCSD VNPRK+PYK SNQ+LR+LGL+F PV+Q LYDTV
Sbjct: 226 VLHREDVVTILRKFFPEYPIPSRCSDSVNPRKRPYKMSNQRLRELGLEFTPVAQCLYDTV 405
Query: 1209 KNLQEKGHLPV 1241
+ QEKG LPV
Sbjct: 406 VSFQEKGILPV 438
Score = 95.9 bits (203), Expect(2) = 2e-053
Identities = 38/54 (70%), Positives = 46/54 (85%)
Frame = +3 / +1
Query: 858 QATVNASIAHILKYLDGSARTFANAVQAYVDVRDVADAHLRVFESPRASGRHLC 1019
Q VNAS+ H+LKYLDGSA+T+ANAVQAYV VRD A AH+ VFE+P A+GR+LC
Sbjct: 49 QPAVNASLTHVLKYLDGSAKTYANAVQAYVHVRDTAAAHVLVFEAPAAAGRYLC 210
Score = 86.8 bits (183), Expect(2) = 4e-035
Identities = 37/59 (62%), Positives = 40/59 (67%)
Frame = -2 / -3
Query: 1240 TGRCPFSWRFFTVS*SDWLTGRNCSPRSRSFWLENLYGCFRGFTSSEHLAGTGYSGKSL 1064
TGR PFSW+ TVS* TG N P SRS W + LYG F GFT SEHL G GYSGK+L
Sbjct: 437 TGRMPFSWKLTTVS*RHCATGVNSRPSSRSRWFDILYGRFLGFTESEHLLGMGYSGKNL 261
Score = 82.6 bits (174), Expect(2) = 4e-035
Identities = 35/50 (70%), Positives = 36/50 (72%)
Frame = -2 / -3
Query: 1006 PDARGLSKTRRCASATSRTSTYACTALAKVRAEPSRYLRMCAMLAFTVAC 857
P A G SKTR CA+A SRT TYACTALA V AEPSRYL C LAFT C
Sbjct: 197 PAAAGASKTRTCAAAVSRTCTYACTALAYVLAEPSRYLSTCVRLAFTAGC 48
>gb|CA014495.1|CA014495 HT11I05r HT Hordeum vulgare subsp. vulgare cDNA clone HT11I05
5-PRIME, mRNA sequence
Length = 654
Score = 139 bits (298), Expect(2) = 3e-053
Identities = 55/87 (63%), Positives = 68/87 (78%)
Frame = +3 / +3
Query: 297 QTVCVTGAAGYIASWLVKLLLEKGYTVKGTVRNPDDPKNAHLKALDGAAERLILCKADLL 476
+ VCVTGA G+I SW+VK LL +GY V+GT R+P D KNAHL AL+GA ERL LC+AD+L
Sbjct: 162 ELVCVTGAGGFIGSWVVKELLLRGYRVRGTARDPADRKNAHLLALEGAEERLTLCRADVL 341
Query: 477 DYDAICRAVQGCQGVFHTASPVTDDPE 557
DYD + A GC GVFH ASPV++DP+
Sbjct: 342 DYDGLRAAFCGCHGVFHVASPVSNDPD 422
Score = 90.4 bits (191), Expect(2) = 3e-053
Identities = 36/56 (64%), Positives = 41/56 (73%)
Frame = +3 / +3
Query: 624 VRRVVFTSSIGAVTMDPKRGPDVVVDESCWSDLEFCEKTRNWYCYGKAVAEHAAWE 791
VRRVVFTSS GAV MDP R PD V+DE+CWSD +FC+ T N YC K +AE A E
Sbjct: 483 VRRVVFTSSYGAVHMDPNRSPDAVLDEACWSDYDFCKNTGNLYCCAKMMAEITATE 650
Score = 67.5 bits (141), Expect(4) = 2e-032
Identities = 27/37 (72%), Positives = 30/37 (81%)
Frame = -1 / -2
Query: 734 LAELEVAPARLVDHDVGPALGVHGHGADGRREHHPPH 624
LAE+ VAPA LV+H VG A+GVH HGA GRREHH PH
Sbjct: 593 LAEVVVAPAGLVEHGVGAAVGVHVHGAVGRREHHAPH 483
Score = 55.1 bits (114), Expect(4) = 2e-032
Identities = 26/45 (57%), Positives = 27/45 (60%)
Frame = -2 / -3
Query: 436 PSSALRCAFFGSSGFLTVPFTVYPFSSSSFTNHEAMYPAAPVTHT 302
PSSA RCAF S+G VP T P SSFT E M P APVT T
Sbjct: 301 PSSASRCAFLRSAGSRAVPLTR*PRRRSSFTTQEPMKPPAPVTQT 167
Score = 39.6 bits (80), Expect(4) = 2e-032
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = -2 / -3
Query: 556 SGSSVTGEAVWKTPWQP 506
SGS TGEA WKTPWQP
Sbjct: 421 SGSLDTGEATWKTPWQP 371
Score = 33.6 bits (67), Expect(4) = 2e-032
Identities = 15/24 (62%), Positives = 16/24 (66%)
Frame = -2 / -3
Query: 634 TRRTVPASAAALITYSVPRTAGST 563
T R PASA ALIT+ VP TA T
Sbjct: 496 TTRRTPASATALITFLVPSTATGT 425
>gb|BM816674.1|BM816674 HB01C06_T3.ab1 HB Hordeum vulgare subsp. vulgare cDNA clone
HB01C06_T3.ab1 similar to Aldehyde reductase,Hydrogen
dehydrogenase,Alcohol dehydrogenase,Cinnamyl-alcohol
dehydrogenase,Hydrogenase,Cytochrome-c3
hydrogenase,Cinnamoyl-CoA reductase,Transferred entry:
1.18.99.1,Carbonyl reductase (NADPH),Dihydrokaempferol
4-reductase,, mRNA sequence
Length = 847
Score = 79.4 bits (167), Expect(4) = 5e-052
Identities = 34/87 (39%), Positives = 49/87 (56%)
Frame = +3 / +1
Query: 540 VTDDPEQMVEPAVRGTEYVINAAAEAGTVRRVVFTSSIGAVTMDPKRGPDVVVDESCWSD 719
V D ++++PAV GT V+ + +A R +V +S R PDVVVDE+ +S
Sbjct: 337 VKDPKAELLDPAVNGTLNVLRSCKKASIKRVIVTSSMAAVAYNGKPRTPDVVVDETWFSS 516
Query: 720 LEFCEKTRNWYCYGKAVAEHAAWETAR 800
E CEK + WY K +AE AAW+ A+
Sbjct: 517 AEVCEKNKQWYVLSKTLAEEAAWKFAK 597
Score = 74.8 bits (157), Expect(4) = 5e-052
Identities = 29/39 (74%), Positives = 34/39 (87%)
Frame = +3 / +1
Query: 294 GQTVCVTGAAGYIASWLVKLLLEKGYTVKGTVRNPDDPK 410
G+ VCVTGA+GYIASWLVKLLL +GYTV+ TVR+ DPK
Sbjct: 76 GKVVCVTGASGYIASWLVKLLLHRGYTVRATVRDTADPK 192
Score = 58.3 bits (121), Expect(4) = 5e-052
Identities = 26/47 (55%), Positives = 30/47 (63%)
Frame = +3 / +1
Query: 399 DDPKNAHLKALDGAAERLILCKADLLDYDAICRAVQGCQGVFHTASP 539
D K HL+AL+GA ERL L KA LL+ A+ GC VFHTASP
Sbjct: 184 DPKKTLHLQALEGAKERLHLFKASLLEEGTFDAAIAGCDCVFHTASP 324
Score = 49.6 bits (102), Expect(4) = 5e-052
Identities = 21/49 (42%), Positives = 33/49 (67%)
Frame = +3 / +1
Query: 858 QATVNASIAHILKYLDGSARTFANAVQAYVDVRDVADAHLRVFESPRAS 1004
Q T+N S ILK ++GS+ T+A+ +V+V+DVA AH+ +E P A+
Sbjct: 655 QPTLNTSAEAILKXINGSSSTYAHFCFGWVNVKDVALAHILAYEDPSAT 801
>gb|BI958460.1|BI958460 HVSMEn0015C07f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0015C07f,
mRNA sequence
Length = 656
Score = 158 bits (339), Expect(2) = 1e-051
Identities = 68/92 (73%), Positives = 76/92 (82%)
Frame = +3 / +1
Query: 858 QATVNASIAHILKYLDGSARTFANAVQAYVDVRDVADAHLRVFESPRASGRHLCAERVLH 1037
Q TVNA HILKYLDGSAR +ANAVQAYVDVRDVA AHLRVFE+P+ASGR+LCA+RVLH
Sbjct: 142 QPTVNAGGGHILKYLDGSARKYANAVQAYVDVRDVAGAHLRVFEAPQASGRYLCADRVLH 321
Query: 1038 REDVVRILAKLFPEYPVPARCSDEVNPRKQPY 1133
R+DV IL +LF E VP S +VNPRKQPY
Sbjct: 322 RQDVFLILGELFRECRVPTGGSGQVNPRKQPY 417
Score = 137 bits (293), Expect(2) = 5e-035
Identities = 62/96 (64%), Positives = 64/96 (66%)
Frame = -2 / -1
Query: 1006 PDARGLSKTRRCASATSRTSTYACTALAKVRAEPSRYLRMCAMLAFTVACXXXXXXXXXX 827
P+A G SKTRRCA ATSRTSTYACTALA AEPSRYLRMC AFTV C
Sbjct: 290 PEAWGASKTRRCAPATSRTSTYACTALAYFLAEPSRYLRMCPPPAFTVGCSSGPTTSTGF 111
Query: 826 XXXXXXXXXRAVSHAACSATALP*QYQFLVFSQNSR 719
A SHAACSATALP*QYQFLVF Q+SR
Sbjct: 110 TTTRSTPRALAFSHAACSATALP*QYQFLVFLQHSR 3
Score = 66.6 bits (139), Expect(2) = 1e-051
Identities = 24/30 (80%), Positives = 26/30 (86%)
Frame = +3 / +1
Query: 717 DLEFCEKTRNWYCYGKAVAEHAAWETARRR 806
DLE C+KT+NWYCYGKAVAE AAWE AR R
Sbjct: 1 DLECCKKTKNWYCYGKAVAEQAAWEKARAR 90
Score = 31.8 bits (63), Expect(2) = 5e-035
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = -2 / -1
Query: 1129 GCFRGFTSSEHLAGTGYSGKS 1067
GCFRGFT E GT +S KS
Sbjct: 413 GCFRGFTCPEPPVGTRHSRKS 351
>gb|BQ464700.1|BQ464700 HU01A05T HU Hordeum vulgare subsp. vulgare cDNA clone HU01A05
5-PRIME, mRNA sequence
Length = 661
Score = 139 bits (299), Expect(2) = 1e-051
Identities = 54/87 (62%), Positives = 68/87 (78%)
Frame = +3 / +2
Query: 297 QTVCVTGAAGYIASWLVKLLLEKGYTVKGTVRNPDDPKNAHLKALDGAAERLILCKADLL 476
+ VCVTGA G+I SW+VK LL +GY V+GT R+P D KNAHL AL+GA ERL +C+AD+L
Sbjct: 203 ELVCVTGAGGFIGSWVVKELLLRGYRVRGTARDPADRKNAHLLALEGAEERLTMCRADVL 382
Query: 477 DYDAICRAVQGCQGVFHTASPVTDDPE 557
DYD + A GC GVFH ASPV++DP+
Sbjct: 383 DYDGLGAAFHGCHGVFHVASPVSNDPD 463
Score = 84.5 bits (178), Expect(2) = 1e-051
Identities = 33/50 (66%), Positives = 37/50 (74%)
Frame = +3 / +2
Query: 606 AAEAGTVRRVVFTSSIGAVTMDPKRGPDVVVDESCWSDLEFCEKTRNWYC 755
AA VRRVVFTSS GAV MDP R PD V+DE+CWSD +FC+ T N YC
Sbjct: 506 AAADAGVRRVVFTSSYGAVHMDPNRSPDAVLDEACWSDYDFCKNTGNLYC 655
Score = 69.3 bits (145), Expect(2) = 8e-021
Identities = 33/52 (63%), Positives = 38/52 (73%)
Frame = -2 / -2
Query: 754 QYQFLVFSQNSRSLQHDSSTTTSGPRLGSMVTAPMDDVNTTRRTVPASAAAL 599
QY+ VF Q S SLQ SS+T SG RLGSM TAP DDVNTTRRT ++AA +
Sbjct: 654 QYRLPVFLQKS*SLQQASSSTASGLRLGSMCTAP*DDVNTTRRTPASAAALI 499
Score = 65.7 bits (137), Expect(4) = 6e-030
Identities = 26/36 (72%), Positives = 29/36 (80%)
Frame = -1 / -1
Query: 731 AELEVAPARLVDHDVGPALGVHGHGADGRREHHPPH 624
AE+ VAPA LV+H VG A+GVH HGA GRREHH PH
Sbjct: 631 AEVVVAPAGLVEHGVGAAVGVHVHGAVGRREHHAPH 524
Score = 52.8 bits (109), Expect(4) = 6e-030
Identities = 25/45 (55%), Positives = 26/45 (57%)
Frame = -2 / -2
Query: 436 PSSALRCAFFGSSGFLTVPFTVYPFSSSSFTNHEAMYPAAPVTHT 302
PS A RCAF S+G VP T P SSFT E M P APVT T
Sbjct: 342 PSRASRCAFLRSAGSRAVPLTR*PRRRSSFTTQEPMKPPAPVTQT 208
Score = 51.9 bits (107), Expect(2) = 8e-021
Identities = 25/66 (37%), Positives = 36/66 (54%)
Frame = -1 / -1
Query: 479 VQQIGLAEDQPLGGAVQRLEVRVLRVIWVPDGALHSVSLLEQQLHQPRGDVPGRAGHAHG 300
V+ +G A +PL +Q +VRVL V + G+ +V+ E+ LH P D R HA
Sbjct: 385 VEDVGAAHCEPLLRPLQGQQVRVLAVSGISGGSSDAVAAEEELLHHPGADEASRTRHADQ 206
Query: 299 LPVPRR 282
LP+P R
Sbjct: 205 LPLPLR 188
Score = 35.4 bits (71), Expect(4) = 6e-030
Identities = 16/24 (66%), Positives = 17/24 (70%)
Frame = -2 / -2
Query: 634 TRRTVPASAAALITYSVPRTAGST 563
T R PASAAALIT+ VP TA T
Sbjct: 537 TTRRTPASAAALITFLVPSTATGT 466
Score = 33.1 bits (66), Expect(4) = 6e-030
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -2 / -2
Query: 556 SGSSVTGEAVWKTPWQP 506
SGS TGEA KTPWQP
Sbjct: 462 SGSLETGEAT*KTPWQP 412
>gb|BF254781.2|BF254781 HVSMEf0005A11f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEf0005A11f, mRNA sequence
Length = 586
Score = 203 bits (437), Expect = 3e-051
Identities = 81/103 (78%), Positives = 93/103 (90%)
Frame = +3 / -1
Query: 933 VQAYVDVRDVADAHLRVFESPRASGRHLCAERVLHREDVVRILAKLFPEYPVPARCSDEV 1112
VQAYV +RD + AH+ FE+P+ASGR+LCAERVLHR+DVV ILAKLFPEYPVP RCSDEV
Sbjct: 526 VQAYVTLRDFSGAHIGFFEAPQASGRYLCAERVLHRQDVVHILAKLFPEYPVPTRCSDEV 347
Query: 1113 NPRKQPYKFSNQKLRDLGLQFRPVSQSLYDTVKNLQEKGHLPV 1241
NPRKQPYK SNQKL+DLGL+F PV+ SLY+TVK+LQEKGHLPV
Sbjct: 346 NPRKQPYKMSNQKLQDLGLKFTPVNDSLYETVKSLQEKGHLPV 218
Score = 107 bits (229), Expect(2) = 6e-027
Identities = 44/59 (74%), Positives = 46/59 (77%)
Frame = -2 / +3
Query: 1240 TGRCPFSWRFFTVS*SDWLTGRNCSPRSRSFWLENLYGCFRGFTSSEHLAGTGYSGKSL 1064
TGRCPFSWR FTVS + TG N PRS SFWL+ L GC RGFTSSEHL GTGYSGKSL
Sbjct: 219 TGRCPFSWRLFTVSYRESFTGVNLRPRSCSFWLDIL*GCLRGFTSSEHLVGTGYSGKSL 395
Score = 34.1 bits (68), Expect(2) = 6e-027
Identities = 14/25 (56%), Positives = 15/25 (60%)
Frame = -2 / +3
Query: 1006 PDARGLSKTRRCASATSRTSTYACT 932
P+A G SK CA SR TYACT
Sbjct: 453 PEAWGASKNPMCAPEKSRNVTYACT 527
>gb|BI950770.1|BI950770 HVSMEl0023C06f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0023C06f, mRNA sequence
Length = 994
Score = 193 bits (415), Expect(2) = 1e-050
Identities = 75/116 (64%), Positives = 96/116 (82%)
Frame = +3 / +3
Query: 291 NGQTVCVTGAAGYIASWLVKLLLEKGYTVKGTVRNPDDPKNAHLKALDGAAERLILCKAD 470
+G+TVCVTGA G+IASWLVK LL+KGYTV+GTVRNP DPKN HL+A DGAA+RL+L +AD
Sbjct: 216 HGRTVCVTGAGGFIASWLVKRLLQKGYTVRGTVRNPVDPKNDHLRAFDGAADRLVLLRAD 395
Query: 471 LLDYDAICRAVQGCQGVFHTASPVTDDPEQMVEPAVRGTEYVINAAAEAGTVRRVV 638
L++ + + A GC+G+FH A PVTDDPE+M+EPA+ GT+YVI AAA+ G R V+
Sbjct: 396 LMEPETLVEAFTGCEGIFHAAFPVTDDPEKMIEPAIPGTKYVITAAADMGIKRGVL 563
Score = 131 bits (281), Expect = 9e-030
Identities = 62/120 (51%), Positives = 70/120 (58%)
Frame = -2 / -1
Query: 649 DDVNTTRRTVPASAAALITYSVPRTAGSTICSGSSVTGEAVWKTPWQPCTXXXXXXXXXX 470
D T R +P SAAA+ITY VP AGS I SGSSVTG+A WK P QP
Sbjct: 574 DGRRKTPRLMPMSAAAVITYFVPGIAGSIIFSGSSVTGKAAWKMPSQPVKASTRVSGSIR 395
Query: 469 XXXXXXXXXXAPSSALRCAFFGSSGFLTVPFTVYPFSSSSFTNHEAMYPAAPVTHTVCPF 290
APS AL+ +FFGS+G TVP TVYPF T+HEAM P APVTHTV P+
Sbjct: 394 SARRRTRRSAAPSKALK*SFFGSTGLRTVPRTVYPFWRRRLTSHEAMKPPAPVTHTVRPW 215
Score = 28.1 bits (55), Expect(2) = 1e-050
Identities = 7/12 (58%), Positives = 11/12 (91%)
Frame = +3 / +3
Query: 708 CWSDLEFCEKTR 743
CWSDL++C++ R
Sbjct: 627 CWSDLDYCKRKR 662
>gb|BQ763026.1|BQ763026 EBro02_SQ006_N19_R root, 3 week, hydroponic grown, low nitrogen, cv
Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone
EBro02_SQ006_N19 5', mRNA sequence
Length = 546
Score = 86.8 bits (183), Expect(3) = 2e-050
Identities = 34/54 (62%), Positives = 43/54 (79%)
Frame = +3 / +3
Query: 399 DDPKNAHLKALDGAAERLILCKADLLDYDAICRAVQGCQGVFHTASPVTDDPEQ 560
D +NAHL+ L+GAAERL L + DLLD +++ A +GCQGVFHTA PVTDDPE+
Sbjct: 264 DVARNAHLRGLEGAAERLTLFRVDLLDKESLVAAFRGCQGVFHTACPVTDDPEK 425
Score = 81.7 bits (172), Expect(3) = 2e-050
Identities = 32/37 (86%), Positives = 34/37 (91%)
Frame = +3 / +3
Query: 294 GQTVCVTGAAGYIASWLVKLLLEKGYTVKGTVRNPDD 404
G+TVCVTGA G+IASWLVKLLLEKGY V GTVRNPDD
Sbjct: 156 GRTVCVTGAGGFIASWLVKLLLEKGYAVHGTVRNPDD 266
Score = 70.7 bits (148), Expect(3) = 2e-050
Identities = 30/42 (71%), Positives = 35/42 (83%)
Frame = +3 / +1
Query: 555 EQMVEPAVRGTEYVINAAAEAGTVRRVVFTSSIGAVTMDPKR 680
++M+EPAV GT VINAAAE G +RRVV TSSIGAV MDP+R
Sbjct: 421 KKMIEPAVSGTRNVINAAAEVGGIRRVVMTSSIGAVYMDPRR 546
Score = 63.4 bits (132), Expect(3) = 2e-032
Identities = 29/40 (72%), Positives = 31/40 (77%)
Frame = -2 / -2
Query: 679 RLGSMVTAPMDDVNTTRRTVPASAAALITYSVPRTAGSTI 560
R GSM TAP+DDV TTRR P SAAALIT+ VP TAGS I
Sbjct: 545 RRGSMYTAPIDDVITTRRMPPTSAAALITFLVPLTAGSII 426
Score = 60.2 bits (125), Expect(3) = 2e-032
Identities = 25/37 (67%), Positives = 28/37 (75%)
Frame = -2 / -3
Query: 403 SSGFLTVPFTVYPFSSSSFTNHEAMYPAAPVTHTVCP 293
SSGF TVP+T PFS S T+H+AM P APVTHTV P
Sbjct: 265 SSGFRTVPWTA*PFSRRSLTSHDAMKPPAPVTHTVRP 155
Score = 54.7 bits (113), Expect(3) = 2e-032
Identities = 23/53 (43%), Positives = 24/53 (45%)
Frame = -2 / -3
Query: 556 SGSSVTGEAVWKTPWQPCTXXXXXXXXXXXXXXXXXXXXAPSSALRCAFFGSS 398
SGSSVTG AVW TPW P APS LRCAF +S
Sbjct: 421 SGSSVTGHAVWNTPWHPRNAATRLSLSSRSTRKRVSRSAAPSKPLRCAFLATS 263
>gb|BE230902.1|BE230902 HVSMEg0001E18f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0001E18f, mRNA sequence
Length = 618
Score = 133 bits (284), Expect(2) = 1e-049
Identities = 52/71 (73%), Positives = 61/71 (85%)
Frame = +3 / +3
Query: 1029 VLHREDVVRILAKLFPEYPVPARCSDEVNPRKQPYKFSNQKLRDLGLQFRPVSQSLYDTV 1208
VLHREDVV IL K FPEYP+P+RCSD VNPRK+PYK SN++LR+LGL+F PV+Q LYDTV
Sbjct: 153 VLHREDVVTILRKFFPEYPIPSRCSDSVNPRKRPYKMSNRRLRELGLEFTPVAQCLYDTV 332
Query: 1209 KNLQEKGHLPV 1241
+ QEKG LPV
Sbjct: 333 VSFQEKGILPV 365
Score = 84.9 bits (179), Expect(2) = 1e-049
Identities = 33/45 (73%), Positives = 40/45 (88%)
Frame = +3 / +3
Query: 885 HILKYLDGSARTFANAVQAYVDVRDVADAHLRVFESPRASGRHLC 1019
H+LKYLDGSA+T+ANAVQAYV VRD A AH+ VFE+P A+GR+LC
Sbjct: 3 HVLKYLDGSAKTYANAVQAYVHVRDTAAAHVLVFEAPAAAGRYLC 137
Score = 80.3 bits (169), Expect(2) = 5e-028
Identities = 36/59 (61%), Positives = 39/59 (66%)
Frame = -2 / -3
Query: 1240 TGRCPFSWRFFTVS*SDWLTGRNCSPRSRSFWLENLYGCFRGFTSSEHLAGTGYSGKSL 1064
TGR PFSW+ TVS* TG N P SRS + LYG F GFT SEHL G GYSGK+L
Sbjct: 364 TGRMPFSWKLTTVS*RHCATGVNSRPSSRSRRFDILYGRFLGFTESEHLLGMGYSGKNL 188
Score = 65.2 bits (136), Expect(2) = 5e-028
Identities = 29/41 (70%), Positives = 30/41 (73%)
Frame = -2 / -3
Query: 1006 PDARGLSKTRRCASATSRTSTYACTALAKVRAEPSRYLRMC 884
P A G SKTR CA+A SRT TYA TALA V AEPSRYL C
Sbjct: 124 PAAAGASKTRTCAAAVSRTCTYAWTALAYVLAEPSRYLSTC 2
>gb|BG344412.1|BG344412 HVSMEg0009D04f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0009D04f, mRNA sequence
Length = 850
Score = 179 bits (386), Expect(2) = 9e-047
Identities = 71/85 (83%), Positives = 80/85 (94%)
Frame = +3 / -2
Query: 987 ESPRASGRHLCAERVLHREDVVRILAKLFPEYPVPARCSDEVNPRKQPYKFSNQKLRDLG 1166
E+P+ASGR+LCAERVLHR+DVV ILAKLFPEYPVP RCSDEVNPRKQPYK SNQKL+DLG
Sbjct: 483 EAPQASGRYLCAERVLHRQDVVHILAKLFPEYPVPTRCSDEVNPRKQPYKMSNQKLQDLG 304
Query: 1167 LQFRPVSQSLYDTVKNLQEKGHLPV 1241
L+F PV+ SLY+TVK+LQEKGHLPV
Sbjct: 303 LKFTPVNDSLYETVKSLQEKGHLPV 229
Score = 110 bits (235), Expect(2) = 2e-026
Identities = 45/59 (76%), Positives = 47/59 (79%)
Frame = -2 / +2
Query: 1240 TGRCPFSWRFFTVS*SDWLTGRNCSPRSRSFWLENLYGCFRGFTSSEHLAGTGYSGKSL 1064
TGRCPFSWR FTVS + TG N PRS SFWL+ L GCFRGFTSSEHL GTGYSGKSL
Sbjct: 230 TGRCPFSWRLFTVSYRESFTGVNLRPRSCSFWLDIL*GCFRGFTSSEHLVGTGYSGKSL 406
Score = 101 bits (216), Expect(2) = 2e-022
Identities = 47/86 (54%), Positives = 57/86 (66%)
Frame = -1 / +1
Query: 1241 HRQVSLLLEVLHRVVKRLADRPELQPQVPELLVGELVRLLPRIHLVGAPGWDGVLGEELX 1062
HR+V LLLE LHR+V+R+ R EL+ ++ +LLVG LVRLLP +HLV AP WDGVLGEEL
Sbjct: 229 HREVPLLLEALHRLVQRVVHRSELEAKILQLLVGHLVRLLPWVHLVRAPCWDGVLGEELG 408
Query: 1061 XXXXXXXXXXXXXXAEVAAGRAGALE 984
A+VAAG G LE
Sbjct: 409 EDVDDVLAVQDALGAKVAAGGLGRLE 486
Score = 29.5 bits (58), Expect(2) = 2e-026
Identities = 17/44 (38%), Positives = 18/44 (40%)
Frame = -2 / +3
Query: 994 GLSKTRRCASATSRTSTYACTALAKVRAEPSRYLRMCAMLAFTV 863
G + C ATS TS YACT P A LA TV
Sbjct: 474 GAPRDPECPPATSPTSPYACTGWRTSWRNPQGT*GCAAELAVTV 605
Score = 28.6 bits (56), Expect(2) = 9e-047
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +3 / -2
Query: 885 HILKYLDGSARTFAN 929
HILK L+GSAR +AN
Sbjct: 582 HILKSLEGSARKYAN 538
Score = 24.9 bits (48), Expect(2) = 2e-022
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = -2 / +2
Query: 928 LAKVRAEPSRYLRMC 884
LA AEPSR LRMC
Sbjct: 539 LAYFLAEPSRDLRMC 583
>gb|BQ767762.1|BQ767762 EBro08_SQ009_D21 _R root, 3 week, drought-stressed, cv Optic,
EBro08 Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ009_D21 5', mRNA sequence
Length = 434
Score = 178 bits (383), Expect = 8e-044
Identities = 71/77 (92%), Positives = 75/77 (97%)
Frame = +3 / +2
Query: 291 NGQTVCVTGAAGYIASWLVKLLLEKGYTVKGTVRNPDDPKNAHLKALDGAAERLILCKAD 470
+GQTVCVTGAAGYIASWLVKLLLE+GYTVKGTVRNPDDPKNAHLKALDGAAERL+LCKAD
Sbjct: 116 HGQTVCVTGAAGYIASWLVKLLLERGYTVKGTVRNPDDPKNAHLKALDGAAERLVLCKAD 295
Query: 471 LLDYDAICRAVQGCQGV 521
LLDYDAIC AV+GC GV
Sbjct: 296 LLDYDAICAAVEGCHGV 346
Score = 113 bits (241), Expect = 3e-024
Identities = 47/76 (61%), Positives = 49/76 (64%)
Frame = -2 / -3
Query: 520 TPWQPCTXXXXXXXXXXXXXXXXXXXXAPSSALRCAFFGSSGFLTVPFTVYPFSSSSFTN 341
TPWQP T APSSA RCAFFGSSGFLTVP TV P S SS T+
Sbjct: 345 TPWQPSTAAQMAS*SRRSALQRTSLSAAPSSAFRCAFFGSSGFLTVPLTV*PLSRSSLTS 166
Query: 340 HEAMYPAAPVTHTVCP 293
H+AMYPAAPVTHTVCP
Sbjct: 165 HDAMYPAAPVTHTVCP 118
Score = 110 bits (234), Expect = 3e-023
Identities = 45/64 (70%), Positives = 54/64 (84%)
Frame = -1 / -2
Query: 479 VQQIGLAEDQPLGGAVQRLEVRVLRVIWVPDGALHSVSLLEQQLHQPRGDVPGRAGHAHG 300
V+++GLAEDQPLGGAVQRL+V +LRVIWVP AL V+ L++QL +PR DVPG AG AHG
Sbjct: 304 VEEVGLAEDQPLGGAVQRLQVCILRVIWVPHCALDGVAPLQEQLDEPRRDVPGGAGDAHG 125
Query: 299 LPVP 288
LPVP
Sbjct: 124 LPVP 113
>gb|BG365391.1|BG365391 HVSMEi0002I06f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0002I06f, mRNA sequence
Length = 757
Score = 134 bits (288), Expect(2) = 9e-044
Identities = 52/83 (62%), Positives = 64/83 (77%)
Frame = +3 / +1
Query: 303 VCVTGAAGYIASWLVKLLLEKGYTVKGTVRNPDDPKNAHLKALDGAAERLILCKADLLDY 482
VCVTG G+IASWLVKLLL +GY V TVR+P DPK+ HLK +D A E L L +AD+LDY
Sbjct: 79 VCVTGGGGFIASWLVKLLLSRGYAVNATVRDPSDPKSVHLKQMDEARENLHLFRADVLDY 258
Query: 483 DAICRAVQGCQGVFHTASPVTDD 551
D + RA +GC+GVFH A+PV +D
Sbjct: 259 DTLTRAFEGCEGVFHLATPVPED 327
Score = 63.4 bits (132), Expect(2) = 9e-044
Identities = 26/66 (39%), Positives = 38/66 (57%)
Frame = +3 / +1
Query: 606 AAEAGTVRRVVFTSSIGAVTMDPKRGPDVVVDESCWSDLEFCEKTRNWYCYGKAVAEHAA 785
A A V++V+ SS AV +P D + DESCWSD +FC+K +W K VAE A+
Sbjct: 394 ACSAMKVQKVIGLSSTAAVDFNPNWPQDKLKDESCWSDKDFCQKNEDWCSVAKIVAEQAS 573
Query: 786 WETARR 803
+ + +
Sbjct: 574 FRYSEK 591
>gb|CA015399.1|CA015399 HT14D04r HT Hordeum vulgare subsp. vulgare cDNA clone HT14D04
5-PRIME, mRNA sequence
Length = 576
Score = 139 bits (299), Expect(2) = 1e-043
Identities = 54/87 (62%), Positives = 68/87 (78%)
Frame = +3 / +2
Query: 297 QTVCVTGAAGYIASWLVKLLLEKGYTVKGTVRNPDDPKNAHLKALDGAAERLILCKADLL 476
+ VCVTGA G+I SW+VK LL +GY V+GT R+P D KNAHL AL+GA ERL +C+AD+L
Sbjct: 161 ELVCVTGAGGFIGSWVVKELLLRGYRVRGTARDPADRKNAHLLALEGAEERLTMCRADVL 340
Query: 477 DYDAICRAVQGCQGVFHTASPVTDDPE 557
DYD + A GC GVFH ASPV++DP+
Sbjct: 341 DYDGLGAAFHGCHGVFHVASPVSNDPD 421
Score = 57.9 bits (120), Expect(2) = 1e-043
Identities = 22/29 (75%), Positives = 24/29 (82%)
Frame = +3 / +3
Query: 630 RVVFTSSIGAVTMDPKRGPDVVVDESCWS 716
RVVFTSS GAV MDP R PD V+DE+CWS
Sbjct: 489 RVVFTSSYGAVHMDPNRSPDAVLDEACWS 575
Score = 57.9 bits (120), Expect(3) = 1e-022
Identities = 23/32 (71%), Positives = 25/32 (78%)
Frame = -1 / -2
Query: 716 APARLVDHDVGPALGVHGHGADGRREHHPPHR 621
APA LV+H VG A+GVH HGA GRREHH P R
Sbjct: 575 APAGLVEHGVGAAVGVHVHGAVGRREHHAPAR 480
Score = 51.9 bits (107), Expect(3) = 1e-022
Identities = 25/66 (37%), Positives = 36/66 (54%)
Frame = -1 / -3
Query: 479 VQQIGLAEDQPLGGAVQRLEVRVLRVIWVPDGALHSVSLLEQQLHQPRGDVPGRAGHAHG 300
V+ +G A +PL +Q +VRVL V + G+ +V+ E+ LH P D R HA
Sbjct: 343 VEDVGAAHCEPLLRPLQGQQVRVLAVSGISGGSSDAVAAEEELLHHPGADEASRTRHADQ 164
Query: 299 LPVPRR 282
LP+P R
Sbjct: 163 LPLPLR 146
Score = 35.0 bits (70), Expect(3) = 1e-022
Identities = 16/25 (64%), Positives = 17/25 (68%)
Frame = -2 / -1
Query: 637 TTRRTVPASAAALITYSVPRTAGST 563
T R PASAAALIT+ VP TA T
Sbjct: 498 TPRARTPASAAALITFLVPSTATGT 424
>gb|CA006616.1|CA006616 HU05D06r HU Hordeum vulgare subsp. vulgare cDNA clone HU05D06
5-PRIME, mRNA sequence
Length = 459
Score = 100 bits (212), Expect(2) = 5e-043
Identities = 38/61 (62%), Positives = 48/61 (78%)
Frame = +3 / +3
Query: 375 VKGTVRNPDDPKNAHLKALDGAAERLILCKADLLDYDAICRAVQGCQGVFHTASPVTDDP 554
V+GT R+P D KNAHL AL+GA ERL +C+AD+LDYD + A GC GVFH ASPV++DP
Sbjct: 15 VRGTARDPADRKNAHLLALEGAEERLTMCRADVLDYDGLGAAFHGCHGVFHVASPVSNDP 194
Query: 555 E 557
+
Sbjct: 195 D 197
Score = 95.9 bits (203), Expect(2) = 5e-043
Identities = 40/67 (59%), Positives = 46/67 (68%)
Frame = +3 / +3
Query: 606 AAEAGTVRRVVFTSSIGAVTMDPKRGPDVVVDESCWSDLEFCEKTRNWYCYGKAVAEHAA 785
AA VRRVVFTSS GAV MDP R PD V+DE+CWSD +FC+ T N YC K +AE A
Sbjct: 240 AAADAGVRRVVFTSSYGAVHMDPNRSPDAVLDEACWSDYDFCKNTGNLYCCAKMMAEITA 419
Query: 786 WETARRR 806
E A +R
Sbjct: 420 TEEAAKR 440
Score = 65.7 bits (137), Expect(4) = 3e-022
Identities = 26/36 (72%), Positives = 29/36 (80%)
Frame = -1 / -2
Query: 731 AELEVAPARLVDHDVGPALGVHGHGADGRREHHPPH 624
AE+ VAPA LV+H VG A+GVH HGA GRREHH PH
Sbjct: 365 AEVVVAPAGLVEHGVGAAVGVHVHGAVGRREHHAPH 258
Score = 35.4 bits (71), Expect(4) = 3e-022
Identities = 16/24 (66%), Positives = 17/24 (70%)
Frame = -2 / -3
Query: 634 TRRTVPASAAALITYSVPRTAGST 563
T R PASAAALIT+ VP TA T
Sbjct: 271 TTRRTPASAAALITFLVPSTATGT 200
Score = 33.1 bits (66), Expect(4) = 3e-022
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -2 / -3
Query: 556 SGSSVTGEAVWKTPWQP 506
SGS TGEA KTPWQP
Sbjct: 196 SGSLETGEAT*KTPWQP 146
Score = 26.3 bits (51), Expect(4) = 3e-022
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = -1 / -2
Query: 479 VQQIGLAEDQPLGGAVQRLEVRVLRVIWVPDGALHSVS 366
V+ +G A +PL +Q +VRVL V + G+ + S
Sbjct: 119 VEDVGAAHCEPLLRPLQGQQVRVLAVSGISGGSSDAAS 6
>gb|BE196376.3|BE196376 HVSMEh0092C03f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0092C03f, mRNA sequence
Length = 975
Score = 137 bits (293), Expect(2) = 6e-043
Identities = 53/83 (63%), Positives = 64/83 (77%)
Frame = +3 / +1
Query: 303 VCVTGAAGYIASWLVKLLLEKGYTVKGTVRNPDDPKNAHLKALDGAAERLILCKADLLDY 482
VCVTG G+IASWLVKLLL +GY V TVR+P DPKN HLK +D A E L L +AD+LDY
Sbjct: 79 VCVTGGGGFIASWLVKLLLSRGYAVNATVRDPSDPKNVHLKQMDEARENLHLFRADVLDY 258
Query: 483 DAICRAVQGCQGVFHTASPVTDD 551
D + RA +GC+GVFH A+PV +D
Sbjct: 259 DTLTRAFEGCEGVFHLATPVPED 327
Score = 58.3 bits (121), Expect(2) = 6e-043
Identities = 24/56 (42%), Positives = 32/56 (57%)
Frame = +3 / +1
Query: 606 AAEAGTVRRVVFTSSIGAVTMDPKRGPDVVVDESCWSDLEFCEKTRNWYCYGKAVA 773
A A V++V+ SS AV +P D + DESCWSD +FC+K +W K VA
Sbjct: 394 ACSAMKVQKVIVLSSTAAVDFNPNWPQDKLKDESCWSDKDFCQKNEDWVFCAKIVA 561
>gb|BF255832.2|BF255832 HVSMEf0007P02f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0007P02f, mRNA sequence
Length = 837
Score = 79.4 bits (167), Expect(3) = 1e-042
Identities = 34/87 (39%), Positives = 49/87 (56%)
Frame = +3 / +2
Query: 540 VTDDPEQMVEPAVRGTEYVINAAAEAGTVRRVVFTSSIGAVTMDPKRGPDVVVDESCWSD 719
V D ++++PAV GT V+ + +A R +V +S R PDVVVDE+ +S
Sbjct: 359 VKDPKAELLDPAVNGTLNVLRSCKKASIKRVIVTSSMAAVAYNGKPRTPDVVVDETWFSS 538
Query: 720 LEFCEKTRNWYCYGKAVAEHAAWETAR 800
E CEK + WY K +AE AAW+ A+
Sbjct: 539 AEVCEKNKQWYVLSKTLAEEAAWKFAK 619
Score = 74.8 bits (157), Expect(3) = 1e-042
Identities = 29/39 (74%), Positives = 34/39 (87%)
Frame = +3 / +2
Query: 294 GQTVCVTGAAGYIASWLVKLLLEKGYTVKGTVRNPDDPK 410
G+ VCVTGA+GYIASWLVKLLL +GYTV+ TVR+ DPK
Sbjct: 98 GKVVCVTGASGYIASWLVKLLLHRGYTVRATVRDTADPK 214
Score = 58.3 bits (121), Expect(3) = 1e-042
Identities = 26/47 (55%), Positives = 30/47 (63%)
Frame = +3 / +2
Query: 399 DDPKNAHLKALDGAAERLILCKADLLDYDAICRAVQGCQGVFHTASP 539
D K HL+AL+GA ERL L KA LL+ A+ GC VFHTASP
Sbjct: 206 DPKKTLHLQALEGAKERLHLFKASLLEEGTFDAAIAGCDCVFHTASP 346
>gb|BU986537.1|BU986537 HF12C17r HF Hordeum vulgare subsp. vulgare cDNA clone HF12C17
5-PRIME, mRNA sequence
Length = 683
Score = 79.0 bits (166), Expect(3) = 2e-042
Identities = 34/87 (39%), Positives = 49/87 (56%)
Frame = +3 / +3
Query: 540 VTDDPEQMVEPAVRGTEYVINAAAEAGTVRRVVFTSSIGAVTMDPKRGPDVVVDESCWSD 719
V D ++++PAV GT V+ + +A R +V +S R PDVVVDE+ +S
Sbjct: 330 VKDPKAELLDPAVNGTLNVLRSCKKASIKRVIVTSSMAAVAYNGKPRTPDVVVDETWFSS 509
Query: 720 LEFCEKTRNWYCYGKAVAEHAAWETAR 800
E CEK + WY K +AE AAW+ A+
Sbjct: 510 AEVCEKNQQWYVLSKTLAEEAAWKFAK 590
Score = 74.8 bits (157), Expect(3) = 2e-042
Identities = 29/39 (74%), Positives = 34/39 (87%)
Frame = +3 / +3
Query: 294 GQTVCVTGAAGYIASWLVKLLLEKGYTVKGTVRNPDDPK 410
G+ VCVTGA+GYIASWLVKLLL +GYTV+ TVR+ DPK
Sbjct: 69 GKVVCVTGASGYIASWLVKLLLHRGYTVRATVRDTADPK 185
Score = 58.3 bits (121), Expect(3) = 2e-042
Identities = 26/47 (55%), Positives = 30/47 (63%)
Frame = +3 / +3
Query: 399 DDPKNAHLKALDGAAERLILCKADLLDYDAICRAVQGCQGVFHTASP 539
D K HL+AL+GA ERL L KA LL+ A+ GC VFHTASP
Sbjct: 177 DPKKTLHLQALEGAKERLHLFKASLLEEGTFDAAIAGCDCVFHTASP 317
>gb|BQ470739.1|BQ470739 HX03O06r HX Hordeum vulgare subsp. vulgare cDNA clone HX03O06
5-PRIME, mRNA sequence
Length = 667
Score = 79.0 bits (166), Expect(3) = 2e-042
Identities = 34/87 (39%), Positives = 49/87 (56%)
Frame = +3 / +2
Query: 540 VTDDPEQMVEPAVRGTEYVINAAAEAGTVRRVVFTSSIGAVTMDPKRGPDVVVDESCWSD 719
V D ++++PAV GT V+ + +A R +V +S R PDVVVDE+ +S
Sbjct: 314 VKDPKAELLDPAVNGTLNVLRSCKKASIKRVIVTSSMAAVAYNGKPRTPDVVVDETWFSS 493
Query: 720 LEFCEKTRNWYCYGKAVAEHAAWETAR 800
E CEK + WY K +AE AAW+ A+
Sbjct: 494 AEVCEKNQQWYVLSKTLAEEAAWKFAK 574
Score = 74.8 bits (157), Expect(3) = 2e-042
Identities = 29/39 (74%), Positives = 34/39 (87%)
Frame = +3 / +2
Query: 294 GQTVCVTGAAGYIASWLVKLLLEKGYTVKGTVRNPDDPK 410
G+ VCVTGA+GYIASWLVKLLL +GYTV+ TVR+ DPK
Sbjct: 53 GKVVCVTGASGYIASWLVKLLLHRGYTVRATVRDTADPK 169
Score = 58.3 bits (121), Expect(3) = 2e-042
Identities = 26/47 (55%), Positives = 30/47 (63%)
Frame = +3 / +2
Query: 399 DDPKNAHLKALDGAAERLILCKADLLDYDAICRAVQGCQGVFHTASP 539
D K HL+AL+GA ERL L KA LL+ A+ GC VFHTASP
Sbjct: 161 DPKKTLHLQALEGAKERLHLFKASLLEEGTFDAAIAGCDCVFHTASP 301
>gb|AW982651.2|AW982651 HVSMEg0003N13f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0003N13f, mRNA sequence
Length = 1042
Score = 77.6 bits (163), Expect(3) = 5e-042
Identities = 33/87 (37%), Positives = 48/87 (55%)
Frame = +3 / +1
Query: 540 VTDDPEQMVEPAVRGTEYVINAAAEAGTVRRVVFTSSIGAVTMDPKRGPDVVVDESCWSD 719
V D ++++P V GT V+ + +A R +V +S R PDVVVDE+ +S
Sbjct: 283 VKDPKAELLDPTVNGTLNVLRSCKKASIKRVIVTSSMAACAYNGKPRTPDVVVDETWFSS 462
Query: 720 LEFCEKTRNWYCYGKAVAEHAAWETAR 800
E CEK + WY K +AE AAW+ A+
Sbjct: 463 AEVCEKNKQWYVLSKTLAEEAAWKFAK 543
Score = 74.8 bits (157), Expect(3) = 5e-042
Identities = 29/39 (74%), Positives = 34/39 (87%)
Frame = +3 / +1
Query: 294 GQTVCVTGAAGYIASWLVKLLLEKGYTVKGTVRNPDDPK 410
G+ VCVTGA+GYIASWLVKLLL +GYTV+ TVR+ DPK
Sbjct: 22 GKVVCVTGASGYIASWLVKLLLHRGYTVRATVRDTADPK 138
Score = 58.3 bits (121), Expect(3) = 5e-042
Identities = 26/47 (55%), Positives = 30/47 (63%)
Frame = +3 / +1
Query: 399 DDPKNAHLKALDGAAERLILCKADLLDYDAICRAVQGCQGVFHTASP 539
D K HL+AL+GA ERL L KA LL+ A+ GC VFHTASP
Sbjct: 130 DPKKTLHLQALEGAKERLHLFKASLLEEGTFDAAIAGCDCVFHTASP 270
>gb|BU996119.1|BU996119 HM12I01r HM Hordeum vulgare subsp. vulgare cDNA clone HM12I01
5-PRIME, mRNA sequence
Length = 482
Score = 159 bits (341), Expect(3) = 9e-042
Identities = 66/112 (58%), Positives = 81/112 (72%)
Frame = +3 / +2
Query: 303 VCVTGAAGYIASWLVKLLLEKGYTVKGTVRNPDDPKNAHLKALDGAAERLILCKADLLDY 482
VCVTGA G+I SW+VKLLL +GY V+GT R DDPKNAHL ALDGAAERL + + DLLD
Sbjct: 11 VCVTGAGGFIGSWIVKLLLARGYAVRGTSRRADDPKNAHLWALDGAAERLTMVQVDLLDR 190
Query: 483 DAICRAVQGCQGVFHTASPVTDDPEQMVEPAVRGTEYVINAAAEAGTVRRVV 638
++ A GC GV HTASP+ D PE+++EP + GT V+ AA AG R V+
Sbjct: 191 ASLRAAFHGCDGVIHTASPMHDTPEEIIEPVITGTLNVVEMAAGAGVRRVVL 346
Score = 94.1 bits (199), Expect(2) = 1e-030
Identities = 50/113 (44%), Positives = 54/113 (47%)
Frame = -2 / -3
Query: 640 NTTRRTVPASAAALITYSVPRTAGSTICSGSSVTGEAVWKTPWQPCTXXXXXXXXXXXXX 461
++T R PA AA T SVP GS I SG S G+AVW TP QP
Sbjct: 348 DSTTRRTPAPAAISTTLSVPVITGSMISSGVSCIGDAVWMTPSQPWKAARRLARSSRSTC 169
Query: 460 XXXXXXXAPSSALRCAFFGSSGFLTVPFTVYPFSSSSFTNHEAMYPAAPVTHT 302
APSSA RCAF GSS VP T P + S T E M P APVT T
Sbjct: 168 TMVSRSAAPSSAHRCAFLGSSARREVPRTA*PRARRSLTIQEPMKPPAPVTQT 10
Score = 60.2 bits (125), Expect(2) = 1e-030
Identities = 24/38 (63%), Positives = 29/38 (76%)
Frame = -1 / -2
Query: 740 GFLAELEVAPARLVDHDVGPALGVHGHGADGRREHHPP 627
G LA +EVAPAR+V+ VG A+GVH HGADG +HH P
Sbjct: 445 GLLAVVEVAPARVVERRVGVAVGVHVHGADGGGQHHAP 332
Score = 28.6 bits (56), Expect(3) = 9e-042
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +1 / +3
Query: 628 GGWCSRRPSAP*PWTPSAGP 687
G WC PSAP TP+A P
Sbjct: 333 GAWCCPPPSAPCT*TPTATP 392
Score = 22.1 bits (42), Expect(3) = 9e-042
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +2 / +1
Query: 737 NQELVLLRQ 763
NQELVLLRQ
Sbjct: 442 NQELVLLRQ 468
>gb|BJ468735.1|BJ468735 BJ468735 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd27a15 5', mRNA sequence
Length = 505
Score = 128 bits (274), Expect(2) = 1e-041
Identities = 54/81 (66%), Positives = 61/81 (75%)
Frame = +3 / +3
Query: 309 VTGAAGYIASWLVKLLLEKGYTVKGTVRNPDDPKNAHLKALDGAAERLILCKADLLDYDA 488
VTG G+IASWLVKLLL +GY V TVR+P D KNAHL LDGAAE L L KAD+LD A
Sbjct: 3 VTGGGGFIASWLVKLLLSRGYAVHATVRDPSDQKNAHLMQLDGAAENLRLFKADVLDSAA 182
Query: 489 ICRAVQGCQGVFHTASPVTDD 551
+ AV+GC+GVFH ASPV D
Sbjct: 183 LAAAVEGCEGVFHVASPVPAD 245
Score = 62.9 bits (131), Expect(2) = 1e-041
Identities = 26/58 (44%), Positives = 31/58 (53%)
Frame = +3 / +3
Query: 624 VRRVVFTSSIGAVTMDPKRGPDVVVDESCWSDLEFCEKTRNWYCYGKAVAEHAAWETA 797
V++VV SS AV +P DESCWSD + C+ WYC K VAE WE A
Sbjct: 330 VQKVVVVSSTAAVRYNPNWPLGKPKDESCWSDRKVCKDNEIWYCLAKTVAEQTVWEYA 503
>gb|AL505150.1|AL505150 AL505150 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW07I24V 5', mRNA sequence
Length = 700
Score = 78.0 bits (164), Expect(3) = 1e-041
Identities = 34/86 (39%), Positives = 48/86 (55%)
Frame = +3 / +1
Query: 540 VTDDPEQMVEPAVRGTEYVINAAAEAGTVRRVVFTSSIGAVTMDPKRGPDVVVDESCWSD 719
V D ++++PAV GT V+ + +A R +V +S R PDVVVDE+ +S
Sbjct: 355 VKDPKAELLDPAVNGTLNVLRSCKKASIKRVIVTSSMAAVAYNGKPRTPDVVVDETWFSS 534
Query: 720 LEFCEKTRNWYCYGKAVAEHAAWETA 797
E CEK + WY K +AE AAW+ A
Sbjct: 535 AEVCEKNQQWYVLSKTLAEEAAWKFA 612
Score = 73.0 bits (153), Expect(3) = 1e-041
Identities = 28/39 (71%), Positives = 33/39 (84%)
Frame = +3 / +1
Query: 294 GQTVCVTGAAGYIASWLVKLLLEKGYTVKGTVRNPDDPK 410
G+ VCVTGA+GYI SWLVKLLL +GYTV+ TVR+ DPK
Sbjct: 94 GKVVCVTGASGYIXSWLVKLLLHRGYTVRATVRDTADPK 210
Score = 58.3 bits (121), Expect(3) = 1e-041
Identities = 26/47 (55%), Positives = 30/47 (63%)
Frame = +3 / +1
Query: 399 DDPKNAHLKALDGAAERLILCKADLLDYDAICRAVQGCQGVFHTASP 539
D K HL+AL+GA ERL L KA LL+ A+ GC VFHTASP
Sbjct: 202 DPKKTLHLQALEGAKERLHLFKASLLEEGTFDAAIAGCDCVFHTASP 342
>gb|BQ467242.1|BQ467242 HS03C04r HS Hordeum vulgare subsp. vulgare cDNA clone HS03C04
5-PRIME, mRNA sequence
Length = 561
Score = 139 bits (298), Expect(2) = 3e-041
Identities = 55/87 (63%), Positives = 68/87 (78%)
Frame = +3 / +3
Query: 297 QTVCVTGAAGYIASWLVKLLLEKGYTVKGTVRNPDDPKNAHLKALDGAAERLILCKADLL 476
+ VCVTGA G+I SW+VK LL +GY V+GT R+P D KNAHL AL+GA ERL LC+AD+L
Sbjct: 159 ELVCVTGAGGFIGSWVVKELLLRGYRVRGTARDPADRKNAHLLALEGAEERLTLCRADVL 338
Query: 477 DYDAICRAVQGCQGVFHTASPVTDDPE 557
DYD + A GC GVFH ASPV++DP+
Sbjct: 339 DYDGLRAAFCGCHGVFHVASPVSNDPD 419
Score = 55.1 bits (114), Expect(4) = 1e-028
Identities = 26/45 (57%), Positives = 27/45 (60%)
Frame = -2 / -3
Query: 436 PSSALRCAFFGSSGFLTVPFTVYPFSSSSFTNHEAMYPAAPVTHT 302
PSSA RCAF S+G VP T P SSFT E M P APVT T
Sbjct: 298 PSSASRCAFLRSAGSRAVPLTR*PRRRSSFTTQEPMKPPAPVTQT 164
Score = 54.2 bits (112), Expect(4) = 1e-028
Identities = 20/27 (74%), Positives = 22/27 (81%)
Frame = -1 / -2
Query: 704 LVDHDVGPALGVHGHGADGRREHHPPH 624
LV+H VG A+GVH HGA GRREHH PH
Sbjct: 560 LVEHGVGAAVGVHVHGAVGRREHHAPH 480
Score = 50.6 bits (104), Expect(2) = 3e-041
Identities = 21/27 (77%), Positives = 22/27 (81%)
Frame = +3 / +3
Query: 624 VRRVVFTSSIGAVTMDPKRGPDVVVDE 704
VRRVVFTSS GAV MDP R PD V+DE
Sbjct: 480 VRRVVFTSSYGAVHMDPNRSPDAVLDE 560
Score = 39.6 bits (80), Expect(4) = 1e-028
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = -2 / -3
Query: 556 SGSSVTGEAVWKTPWQP 506
SGS TGEA WKTPWQP
Sbjct: 418 SGSLDTGEATWKTPWQP 368
Score = 33.6 bits (67), Expect(4) = 1e-028
Identities = 15/24 (62%), Positives = 16/24 (66%)
Frame = -2 / -3
Query: 634 TRRTVPASAAALITYSVPRTAGST 563
T R PASA ALIT+ VP TA T
Sbjct: 493 TTRRTPASATALITFLVPSTATGT 422
>gb|BE196379.3|BE196379 HVSMEh0092C06f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0092C06f, mRNA sequence
Length = 941
Score = 74.8 bits (157), Expect(4) = 8e-041
Identities = 29/39 (74%), Positives = 34/39 (87%)
Frame = +3 / +2
Query: 294 GQTVCVTGAAGYIASWLVKLLLEKGYTVKGTVRNPDDPK 410
G+ VCVTGA+GYIASWLVKLLL +GYTV+ TVR+ DPK
Sbjct: 134 GKVVCVTGASGYIASWLVKLLLHRGYTVRATVRDTADPK 250
Score = 61.1 bits (127), Expect(4) = 8e-041
Identities = 28/73 (38%), Positives = 39/73 (53%)
Frame = +3 / +2
Query: 540 VTDDPEQMVEPAVRGTEYVINAAAEAGTVRRVVFTSSIGAVTMDPKRGPDVVVDESCWSD 719
V D ++++PAV GT V+ + +A R +V +S R PDVVVDE+ +S
Sbjct: 395 VKDPKAELLDPAVNGTLNVLRSCKKASIKRVIVTSSMAAVXLHGKPRTPDVVVDETWFSS 574
Query: 720 LEFCEKTRNWYCY 758
E CEK N CY
Sbjct: 575 AEVCEKISNGMCY 613
Score = 58.3 bits (121), Expect(4) = 8e-041
Identities = 26/47 (55%), Positives = 30/47 (63%)
Frame = +3 / +2
Query: 399 DDPKNAHLKALDGAAERLILCKADLLDYDAICRAVQGCQGVFHTASP 539
D K HL+AL+GA ERL L KA LL+ A+ GC VFHTASP
Sbjct: 242 DPKKTLHLQALEGAKERLHLFKASLLEEGTFDAAIAGCDCVFHTASP 382
Score = 29.9 bits (59), Expect(4) = 8e-041
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +3 / +1
Query: 735 KTRNWYCYGKAVAEHAAWETAR 800
K + WY K +AE AAW A+
Sbjct: 589 KDKQWYVLSKTLAEGAAWXVAK 654
>gb|BE559021.2|BE559021 HV_CEb0022F12f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0022F12f, mRNA sequence
Length = 697
Score = 105 bits (223), Expect(4) = 8e-041
Identities = 44/64 (68%), Positives = 51/64 (79%)
Frame = +3 / +1
Query: 351 LLLEKGYTVKGTVRNPDDPKNAHLKALDGAAERLILCKADLLDYDAICRAVQGCQGVFHT 530
LL + YTV+GTVR+P + KNAHLKAL+GA ERL L ADLLDYD+I AV GC+GVFH
Sbjct: 130 LLSKAHYTVRGTVRDPGNAKNAHLKALEGAGERLQLLSADLLDYDSIASAVAGCEGVFHV 309
Query: 531 ASPV 542
ASPV
Sbjct: 310 ASPV 321
Score = 50.1 bits (103), Expect(4) = 8e-041
Identities = 24/66 (36%), Positives = 30/66 (45%)
Frame = +3 / +1
Query: 606 AAEAGTVRRVVFTSSIGAVTMDPKRGPDVVVDESCWSDLEFCEKTRNWYCYGKAVAEHAA 785
A V+RVV SS AV +P V E WSD + C K +WY K AE A
Sbjct: 397 ACNEAKVKRVVIVSSCAAVFNNPNWPKGKVFTEDSWSDEDLCRKGEDWYLLSKTRAEREA 576
Query: 786 WETARR 803
+ A +
Sbjct: 577 FAYAAK 594
Score = 46.4 bits (95), Expect(4) = 8e-041
Identities = 17/23 (73%), Positives = 20/23 (86%)
Frame = +3 / +1
Query: 303 VCVTGAAGYIASWLVKLLLEKGY 371
VCVTGA G++ASWLVKLLL K +
Sbjct: 79 VCVTGAGGFVASWLVKLLLSKAH 147
Score = 22.6 bits (43), Expect(4) = 8e-041
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +3 / +1
Query: 858 QATVNASIAHILKYL 902
Q TVNAS +LKYL
Sbjct: 649 QPTVNASSKILLKYL 693
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 518,329,853
Number of Sequences: 312970
Number of extensions: 7704795
Number of successful extensions: 95924
Number of sequences better than 1.0e-020: 263
length of database: 58,378,179
effective HSP length: 53
effective length of database: 41,790,769
effective search space used: 18931218357
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)