TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2969912.2.1
(507 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CV054175.1|CV054175 BNEL107f1 Barley EST endosperm libra... 235 8e-076
gb|CV063066.1|CV063066 BNEL86c3 Barley EST endosperm librar... 235 1e-075
gb|CV063107.1|CV063107 BNEL86g1 Barley EST endosperm librar... 228 1e-073
gb|BE214157.3|BE214157 HV_CEb0002H13f Hordeum vulgare seedl... 226 6e-073
gb|CV057862.1|CV057862 BNEL31f4 Barley EST endosperm librar... 235 4e-067
gb|BI958316.1|BI958316 HVSMEn0014G04f Hordeum vulgare rachi... 204 2e-066
gb|BI776330.2|BI776330 EBem04_SQ001_K08_R embryo, 12 DPA, n... 200 2e-065
gb|CK122370.1|CK122370 BES1824103a12 BES1824 Hordeum vulgar... 237 2e-064
gb|AW982197.2|AW982197 HVSMEg0002E02f Hordeum vulgare pre-a... 171 2e-056
gb|BG300073.1|BG300073 HVSMEb0011F07f Hordeum vulgare seedl... 138 9e-047
gb|CA030421.1|CA030421 HX07A07r HX Hordeum vulgare subsp. v... 133 3e-045
gb|CV059539.1|CV059539 BNEL49c1 Barley EST endosperm librar... 117 2e-040
gb|BU987846.1|BU987846 HF15O20r HF Hordeum vulgare subsp. v... 160 5e-039
gb|BU989665.1|BU989665 HF22F21r HF Hordeum vulgare subsp. v... 149 1e-035
gb|CA030770.1|CA030770 HX08B09r HX Hordeum vulgare subsp. v... 89 3e-032
gb|BI960699.1|BI960699 HVSMEn0025O19f Hordeum vulgare rachi... 104 7e-030
gb|BG365391.1|BG365391 HVSMEi0002I06f Hordeum vulgare 20 DA... 66 9e-030
gb|BQ763022.1|BQ763022 EBro02_SQ006_M20_R root, 3 week, hyd... 80 2e-029
gb|BG344152.2|BG344152 HVSMEg0007N17f Hordeum vulgare pre-a... 104 4e-029
gb|BI958105.1|BI958105 HVSMEn0013G15f Hordeum vulgare rachi... 102 8e-029
gb|BI960557.1|BI960557 HVSMEn0025A09f Hordeum vulgare rachi... 102 9e-029
gb|CA032017.1|CA032017 HX11M09r HX Hordeum vulgare subsp. v... 72 4e-028
gb|BI959031.1|BI959031 HVSMEn0017M21f Hordeum vulgare rachi... 105 3e-027
gb|BE559021.2|BE559021 HV_CEb0022F12f Hordeum vulgare seedl... 70 3e-027
gb|BJ463463.1|BJ463463 BJ463463 K. Sato unpublished cDNA li... 70 3e-027
gb|BJ464137.1|BJ464137 BJ464137 K. Sato unpublished cDNA li... 70 3e-027
gb|AL506722.1|AL506722 AL506722 Hordeum vulgare Barke devel... 70 3e-027
gb|AV915311.1|AV915311 AV915311 K. Sato unpublished cDNA li... 70 3e-027
gb|CA007645.1|CA007645 HU08J12r HU Hordeum vulgare subsp. v... 68 1e-026
gb|BG301229.1|BG301229 HVSMEb0020B01f Hordeum vulgare seedl... 95 2e-026
gb|BM816674.1|BM816674 HB01C06_T3.ab1 HB Hordeum vulgare su... 82 2e-026
gb|BF255832.2|BF255832 HVSMEf0007P02f Hordeum vulgare seedl... 82 2e-026
gb|BU986537.1|BU986537 HF12C17r HF Hordeum vulgare subsp. v... 82 2e-026
gb|BQ470739.1|BQ470739 HX03O06r HX Hordeum vulgare subsp. v... 82 2e-026
gb|AL505150.1|AL505150 AL505150 Hordeum vulgare Barke roots... 82 3e-026
gb|BF263685.3|BF263685 HV_CEa0007G08f Hordeum vulgare seedl... 94 3e-026
gb|BF066116.1|BF066116 HV_CEb0014O07f Hordeum vulgare seedl... 90 3e-026
gb|BF066138.1|BF066138 HV_CEb0014P07f Hordeum vulgare seedl... 90 3e-026
gb|CA013420.1|CA013420 HT08G10r HT Hordeum vulgare subsp. v... 83 7e-026
gb|AW982651.2|AW982651 HVSMEg0003N13f Hordeum vulgare pre-a... 80 7e-026
gb|BE602876.2|BE602876 HVSMEh0100H17f Hordeum vulgare 5-45 ... 64 2e-025
gb|CA031581.1|CA031581 HX10G17r HX Hordeum vulgare subsp. v... 61 6e-025
gb|CA019777.1|CA019777 HV13C06r HV Hordeum vulgare subsp. v... 62 2e-024
gb|AV914608.1|AV914608 AV914608 K. Sato unpublished cDNA li... 59 4e-024
gb|CA030259.1|CA030259 HX06I17r HX Hordeum vulgare subsp. v... 68 4e-024
gb|CA007077.1|CA007077 HU06K19r HU Hordeum vulgare subsp. v... 70 2e-023
gb|BJ464456.1|BJ464456 BJ464456 K. Sato unpublished cDNA li... 70 3e-023
gb|AV913390.1|AV913390 AV913390 K. Sato unpublished cDNA li... 70 3e-023
gb|BU996119.1|BU996119 HM12I01r HM Hordeum vulgare subsp. v... 62 3e-023
gb|AV836450.1|AV836450 AV836450 K. Sato unpublished cDNA li... 90 4e-023
gb|AW983188.3|AW983188 HVSMEg0008J14f Hordeum vulgare pre-a... 51 6e-023
gb|AV934049.1|AV934049 AV934049 K. Sato unpublished cDNA li... 77 6e-023
gb|AL505019.1|AL505019 AL505019 Hordeum vulgare Barke roots... 66 2e-022
gb|BE456124.3|BE456124 HVSMEg0019N22f Hordeum vulgare pre-a... 51 4e-022
gb|BM374136.2|BM374136 EBma03_SQ003_M01_R maternal, 8 DPA, ... 53 5e-022
gb|BE196379.3|BE196379 HVSMEh0092C06f Hordeum vulgare 5-45 ... 53 5e-022
gb|BE454821.3|BE454821 HVSMEh0095D03f Hordeum vulgare 5-45 ... 53 6e-022
gb|BM373054.2|BM373054 EBma04_SQ002_O16_R maternal, 10 DPA,... 53 6e-022
gb|BI777845.2|BI777845 EBro08_SQ002_E16_R root, 3 week, dro... 79 7e-022
gb|BM098777.2|BM098777 EBpi05_SQ002_A12_R pistil, 8 DPA, no... 53 7e-022
gb|CA014495.1|CA014495 HT11I05r HT Hordeum vulgare subsp. v... 60 8e-022
gb|BF065218.2|BF065218 HV_CEb0024E13f Hordeum vulgare seedl... 69 8e-022
gb|BQ760073.1|BQ760073 EBpi07_SQ003_J03_R pistil, 12 DPA, n... 53 8e-022
gb|BG415963.1|BG415963 HVSMEk0009D15f Hordeum vulgare testa... 53 9e-022
gb|BM373176.2|BM373176 EBma04_SQ003_G09_R maternal, 10 DPA,... 53 9e-022
gb|BE194523.2|BE194523 HVSMEh0085O04f Hordeum vulgare 5-45 ... 53 9e-022
gb|BG418564.2|BG418564 HVSMEk0023C20f Hordeum vulgare testa... 53 9e-022
gb|BG418662.2|BG418662 HVSMEk0023M18f Hordeum vulgare testa... 53 9e-022
gb|BE455022.2|BE455022 HVSMEh0095O05f Hordeum vulgare 5-45 ... 53 9e-022
gb|AL508144.1|AL508144 AL508144 Hordeum vulgare Barke devel... 53 9e-022
gb|BG416654.1|BG416654 HVSMEk0014A07f Hordeum vulgare testa... 53 9e-022
gb|CK124748.1|CK124748 BES1824110d17 BES1824 Hordeum vulgar... 53 9e-022
gb|CK125597.1|CK125597 BES1824109c14 BES1824 Hordeum vulgar... 53 9e-022
gb|BG415143.1|BG415143 HVSMEk0005F01f Hordeum vulgare testa... 53 1e-021
gb|BG414757.2|BG414757 HVSMEk0003J21f Hordeum vulgare testa... 53 1e-021
gb|BQ458877.1|BQ458877 HA02P13r HA Hordeum vulgare subsp. v... 53 1e-021
gb|BG369168.1|BG369168 HVSMEi0022M03f Hordeum vulgare 20 DA... 62 1e-021
gb|BE602882.1|BE602882 HVSMEh0100J05f Hordeum vulgare 5-45 ... 53 2e-021
gb|BQ763026.1|BQ763026 EBro02_SQ006_N19_R root, 3 week, hyd... 53 2e-021
gb|AV925423.1|AV925423 AV925423 K. Sato unpublished cDNA li... 60 4e-021
gb|BJ452084.1|BJ452084 BJ452084 K. Sato unpublished cDNA li... 62 4e-021
gb|AV913397.1|AV913397 AV913397 K. Sato unpublished cDNA li... 65 4e-021
gb|BG414602.1|BG414602 HVSMEk0003A18f Hordeum vulgare testa... 54 4e-021
gb|BG414416.1|BG414416 HVSMEk0002H01f Hordeum vulgare testa... 51 4e-021
gb|BI955632.1|BI955632 HVSMEm0023N15f Hordeum vulgare green... 54 6e-021
gb|BG418101.2|BG418101 HVSMEk0021F02f Hordeum vulgare testa... 51 6e-021
gb|BQ763369.1|BQ763369 EBro02_SQ008_J04_R root, 3 week, hyd... 53 7e-021
gb|BE519901.1|BE519901 HV_CEb0021K08f Hordeum vulgare seedl... 66 8e-021
gb|AL507235.1|AL507235 AL507235 Hordeum vulgare Barke devel... 53 8e-021
>gb|CV054175.1|CV054175 BNEL107f1 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL107f1 5' similar to putative
cinnamoyl-CoA reductase, mRNA sequence
Length = 721
Score = 235 bits (508), Expect(2) = 8e-076
Identities = 92/119 (77%), Positives = 100/119 (84%)
Frame = +3 / +3
Query: 150 RLSFFRCXXXXXXXXXXXXRGCSGVFHLASPCTVDPVKDPQNQLMVPAVEGTLNVVRAXK 329
R+ FF C RGCSGVFHLASPCTVD V DPQ +L+VPAVEGTLNV+RA K
Sbjct: 258 RVRFFPCDLLDGAAMLAAARGCSGVFHLASPCTVDRVLDPQKELVVPAVEGTLNVLRAAK 437
Query: 330 DAGGVRRVVVTSSISAVVPNPGWPAGEVVDERCWTDIDYCEKNGVWYPASKTLAEKAAW 506
DAGGVRRVVVTSS+SAVVP+PGWPAGEV+DERCWTDIDYC+KNGVWYPASKTL EKAAW
Sbjct: 438 DAGGVRRVVVTSSVSAVVPSPGWPAGEVLDERCWTDIDYCDKNGVWYPASKTLTEKAAW 614
Score = 161 bits (346), Expect(2) = 5e-041
Identities = 70/97 (72%), Positives = 72/97 (74%)
Frame = -3 / -1
Query: 505 HAAFSASVLEAGYQTPFFXXXXXXXXXXXXXXSPAGHPGLGTTAEMDEVTTTRRTPPASL 326
HAAFS SV EAGYQTPF SPAG PGLGTTAE DEVTTTRRTPPASL
Sbjct: 613 HAAFSVSVFEAGYQTPFLSQ*SMSVQQRSSRTSPAGQPGLGTTAETDEVTTTRRTPPASL 434
Query: 325 XARTTFSVPSTAGTIS*FWGSLTGSTVQGDARWKTPE 215
AR+T SVPSTAGT S FWGS T STVQG+ARWKTPE
Sbjct: 433 AARSTLSVPSTAGTTSSFWGSRTRSTVQGEARWKTPE 323
Score = 68.0 bits (142), Expect(2) = 8e-076
Identities = 28/38 (73%), Positives = 32/38 (84%)
Frame = +3 / +3
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAETDH 116
VTGASGFIGS VR LL RGY+V A VL+PDD+AET+H
Sbjct: 114 VTGASGFIGSVTVRLLLARGYSVHAAVLNPDDKAETEH 227
Score = 27.2 bits (53), Expect(2) = 5e-041
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = -3 / -1
Query: 31 EPMKPLAPVT 2
EPMKPLAPVT
Sbjct: 142 EPMKPLAPVT 113
>gb|CV063066.1|CV063066 BNEL86c3 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL86c3 5' similar to putative
cinnamoyl-CoA reductase, mRNA sequence
Length = 715
Score = 235 bits (507), Expect(2) = 1e-075
Identities = 92/119 (77%), Positives = 100/119 (84%)
Frame = +3 / +3
Query: 150 RLSFFRCXXXXXXXXXXXXRGCSGVFHLASPCTVDPVKDPQNQLMVPAVEGTLNVVRAXK 329
R+ FF C RGCSGVFHLASPCTVD V DPQ +L+VPAVEGTLNV+RA K
Sbjct: 216 RVRFFPCDLLDGAVMLAAARGCSGVFHLASPCTVDRVLDPQKELVVPAVEGTLNVLRAAK 395
Query: 330 DAGGVRRVVVTSSISAVVPNPGWPAGEVVDERCWTDIDYCEKNGVWYPASKTLAEKAAW 506
DAGGVRRVVVTSS+SAVVP+PGWPAGEV+DERCWTDIDYC+KNGVWYPASKTL EKAAW
Sbjct: 396 DAGGVRRVVVTSSVSAVVPSPGWPAGEVLDERCWTDIDYCDKNGVWYPASKTLTEKAAW 572
Score = 161 bits (346), Expect(2) = 5e-041
Identities = 70/97 (72%), Positives = 72/97 (74%)
Frame = -3 / -1
Query: 505 HAAFSASVLEAGYQTPFFXXXXXXXXXXXXXXSPAGHPGLGTTAEMDEVTTTRRTPPASL 326
HAAFS SV EAGYQTPF SPAG PGLGTTAE DEVTTTRRTPPASL
Sbjct: 571 HAAFSVSVFEAGYQTPFLSQ*SMSVQQRSSRTSPAGQPGLGTTAETDEVTTTRRTPPASL 392
Query: 325 XARTTFSVPSTAGTIS*FWGSLTGSTVQGDARWKTPE 215
AR+T SVPSTAGT S FWGS T STVQG+ARWKTPE
Sbjct: 391 AARSTLSVPSTAGTTSSFWGSRTRSTVQGEARWKTPE 281
Score = 68.0 bits (142), Expect(2) = 1e-075
Identities = 28/38 (73%), Positives = 32/38 (84%)
Frame = +3 / +3
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAETDH 116
VTGASGFIGS VR LL RGY+V A VL+PDD+AET+H
Sbjct: 72 VTGASGFIGSVTVRLLLARGYSVHAAVLNPDDKAETEH 185
Score = 27.2 bits (53), Expect(2) = 5e-041
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = -3 / -1
Query: 31 EPMKPLAPVT 2
EPMKPLAPVT
Sbjct: 100 EPMKPLAPVT 71
>gb|CV063107.1|CV063107 BNEL86g1 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL86g1 5' similar to putative
cinnamoyl-CoA reductase, mRNA sequence
Length = 711
Score = 228 bits (492), Expect(2) = 1e-073
Identities = 90/119 (75%), Positives = 98/119 (82%)
Frame = +3 / +3
Query: 150 RLSFFRCXXXXXXXXXXXXRGCSGVFHLASPCTVDPVKDPQNQLMVPAVEGTLNVVRAXK 329
R+ FF C RGCSGVFHLASPCTVD V DPQ +L+VPAVEGTLNV+RA K
Sbjct: 258 RVRFFPCDLLDGAGMLAAARGCSGVFHLASPCTVDRVLDPQKELVVPAVEGTLNVLRAAK 437
Query: 330 DAGGVRRVVVTSSISAVVPNPGWPAGEVVDERCWTDIDYCEKNGVWYPASKTLAEKAAW 506
DAGGVRRVVVTSS+SAVVP+PGWPAGEV+ ERCWTDIDYC+KNGVWYPA KTL EKAAW
Sbjct: 438 DAGGVRRVVVTSSVSAVVPSPGWPAGEVLHERCWTDIDYCDKNGVWYPA*KTLTEKAAW 614
Score = 158 bits (340), Expect(2) = 3e-040
Identities = 68/98 (69%), Positives = 72/98 (73%)
Frame = -3 / -3
Query: 505 HAAFSASVLEAGYQTPFFXXXXXXXXXXXXXXSPAGHPGLGTTAEMDEVTTTRRTPPASL 326
HAAFS SV +AGYQTPF SPAG PGLGTTA+ DEVTTTRRTPPASL
Sbjct: 613 HAAFSVSVFQAGYQTPFLSQ*SMSVQQRSWRTSPAGQPGLGTTADTDEVTTTRRTPPASL 434
Query: 325 XARTTFSVPSTAGTIS*FWGSLTGSTVQGDARWKTPEH 212
AR+T SVPSTAGT S FWGS T STVQG+ARW TPEH
Sbjct: 433 AARSTLSVPSTAGTTSSFWGSRTRSTVQGEARWXTPEH 320
Score = 68.0 bits (142), Expect(2) = 1e-073
Identities = 28/38 (73%), Positives = 32/38 (84%)
Frame = +3 / +3
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAETDH 116
VTGASGFIGS VR LL RGY+V A VL+PDD+AET+H
Sbjct: 114 VTGASGFIGSVTVRLLLARGYSVHAAVLNPDDKAETEH 227
Score = 27.2 bits (53), Expect(2) = 3e-040
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = -3 / -3
Query: 31 EPMKPLAPVT 2
EPMKPLAPVT
Sbjct: 142 EPMKPLAPVT 113
>gb|BE214157.3|BE214157 HV_CEb0002H13f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0002H13f, mRNA sequence
Length = 942
Score = 226 bits (487), Expect(2) = 6e-073
Identities = 90/117 (76%), Positives = 98/117 (83%)
Frame = +3 / +1
Query: 150 RLSFFRCXXXXXXXXXXXXRGCSGVFHLASPCTVDPVKDPQNQLMVPAVEGTLNVVRAXK 329
R+ FF C RGCSGVFHLASPCTVD V DPQ +L+VPAVEGTLNV+RA K
Sbjct: 196 RVRFFPCDLLDGAAMLAAARGCSGVFHLASPCTVDRVLDPQKELVVPAVEGTLNVLRAAK 375
Query: 330 DAGGVRRVVVTSSISAVVPNPGWPAGEVVDERCWTDIDYCEKNGVWYPASKTLAEKA 500
DAGGVRRVVVTSS+SAVVP+PGWPAGEV+DERCWTDIDYC+KNGVW PASKTLAEKA
Sbjct: 376 DAGGVRRVVVTSSVSAVVPSPGWPAGEVLDERCWTDIDYCDKNGVWDPASKTLAEKA 546
Score = 157 bits (337), Expect(2) = 1e-039
Identities = 69/97 (71%), Positives = 71/97 (73%)
Frame = -3 / -2
Query: 505 HAAFSASVLEAGYQTPFFXXXXXXXXXXXXXXSPAGHPGLGTTAEMDEVTTTRRTPPASL 326
H AFSASV EAG QTPF SPAG PGLGTTAE DEVTTTRRTPPASL
Sbjct: 551 HVAFSASVFEAGSQTPFLSQ*SMSVQQRSSRTSPAGQPGLGTTAETDEVTTTRRTPPASL 372
Query: 325 XARTTFSVPSTAGTIS*FWGSLTGSTVQGDARWKTPE 215
AR+T SVPSTAGT S FWGS T STVQG+ARWKTPE
Sbjct: 371 AARSTLSVPSTAGTTSSFWGSRTRSTVQGEARWKTPE 261
Score = 68.0 bits (142), Expect(2) = 6e-073
Identities = 28/38 (73%), Positives = 32/38 (84%)
Frame = +3 / +1
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAETDH 116
VTGASGFIGS VR LL RGY+V A VL+PDD+AET+H
Sbjct: 52 VTGASGFIGSVTVRLLLARGYSVHAAVLNPDDKAETEH 165
Score = 27.2 bits (53), Expect(2) = 1e-039
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = -3 / -2
Query: 31 EPMKPLAPVT 2
EPMKPLAPVT
Sbjct: 80 EPMKPLAPVT 51
>gb|CV057862.1|CV057862 BNEL31f4 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL31f4 5' similar to putative
cinnamoyl-CoA reductase, mRNA sequence
Length = 634
Score = 235 bits (508), Expect(3) = 4e-067
Identities = 92/119 (77%), Positives = 100/119 (84%)
Frame = +3 / +1
Query: 150 RLSFFRCXXXXXXXXXXXXRGCSGVFHLASPCTVDPVKDPQNQLMVPAVEGTLNVVRAXK 329
R+ FF C RGCSGVFHLASPCTVD V DPQ +L+VPAVEGTLNV+RA K
Sbjct: 217 RVRFFPCDLLDGAAMLAAARGCSGVFHLASPCTVDRVLDPQKELVVPAVEGTLNVLRAAK 396
Query: 330 DAGGVRRVVVTSSISAVVPNPGWPAGEVVDERCWTDIDYCEKNGVWYPASKTLAEKAAW 506
DAGGVRRVVVTSS+SAVVP+PGWPAGEV+DERCWTDIDYC+KNGVWYPASKTL EKAAW
Sbjct: 397 DAGGVRRVVVTSSVSAVVPSPGWPAGEVLDERCWTDIDYCDKNGVWYPASKTLTEKAAW 573
Score = 161 bits (346), Expect = 3e-039
Identities = 70/97 (72%), Positives = 72/97 (74%)
Frame = -3 / -3
Query: 505 HAAFSASVLEAGYQTPFFXXXXXXXXXXXXXXSPAGHPGLGTTAEMDEVTTTRRTPPASL 326
HAAFS SV EAGYQTPF SPAG PGLGTTAE DEVTTTRRTPPASL
Sbjct: 572 HAAFSVSVFEAGYQTPFLSQ*SMSVQQRSSRTSPAGQPGLGTTAETDEVTTTRRTPPASL 393
Query: 325 XARTTFSVPSTAGTIS*FWGSLTGSTVQGDARWKTPE 215
AR+T SVPSTAGT S FWGS T STVQG+ARWKTPE
Sbjct: 392 AARSTLSVPSTAGTTSSFWGSRTRSTVQGEARWKTPE 282
Score = 29.9 bits (59), Expect(3) = 4e-067
Identities = 15/25 (60%), Positives = 16/25 (64%)
Frame = +3 / +3
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRA 77
VT ASGFI S LL RGY+V A
Sbjct: 72 VTRASGFIRSGTRAPLLARGYSVHA 146
Score = 27.6 bits (54), Expect(3) = 4e-067
Identities = 9/12 (75%), Positives = 12/12 (100%)
Frame = +3 / +1
Query: 81 VLDPDDRAETDH 116
VL+PDD+AET+H
Sbjct: 151 VLNPDDKAETEH 186
>gb|BI958316.1|BI958316 HVSMEn0014G04f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0014G04f, mRNA sequence
Length = 666
Score = 204 bits (439), Expect(2) = 2e-066
Identities = 81/116 (69%), Positives = 91/116 (78%)
Frame = +3 / +3
Query: 150 RLSFFRCXXXXXXXXXXXXRGCSGVFHLASPCTVDPVKDPQNQLMVPAVEGTLNVVRAXK 329
R+ FF C RGCSGVFHLASPCTVD V DPQ +L+VPAVEGTLNV+RA K
Sbjct: 216 RVRFFPCDLLDGAAMLAAARGCSGVFHLASPCTVDRVLDPQKELVVPAVEGTLNVLRAAK 395
Query: 330 DAGGVRRVVVTSSISAVVPNPGWPAGEVVDERCWTDIDYCEKNGVWYPASKTLAEK 497
DAGGVRRVVVTSS+SAVVP+PGWPAGEV+ CWTDIDYC++N VW PASKT +K
Sbjct: 396 DAGGVRRVVVTSSVSAVVPSPGWPAGEVLXXACWTDIDYCDQNXVWSPASKTWLKK 563
Score = 130 bits (278), Expect(3) = 3e-038
Identities = 54/64 (84%), Positives = 56/64 (87%)
Frame = -3 / -3
Query: 406 PAGHPGLGTTAEMDEVTTTRRTPPASLXARTTFSVPSTAGTIS*FWGSLTGSTVQGDARW 227
PAG PGLGTTAE DEVTTTRRTPPASL AR+T SVPSTAGT S FWGS T STVQG+ARW
Sbjct: 472 PAGQPGLGTTAETDEVTTTRRTPPASLAARSTLSVPSTAGTTSSFWGSRTRSTVQGEARW 293
Query: 226 KTPE 215
KTPE
Sbjct: 292 KTPE 281
Score = 68.0 bits (142), Expect(2) = 2e-066
Identities = 28/38 (73%), Positives = 32/38 (84%)
Frame = +3 / +3
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAETDH 116
VTGASGFIGS VR LL RGY+V A VL+PDD+AET+H
Sbjct: 72 VTGASGFIGSVTVRLLLARGYSVHAAVLNPDDKAETEH 185
Score = 40.0 bits (81), Expect(3) = 3e-038
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = -2 / -2
Query: 500 RLLRQRLGSRVPNPVLLAVVDVGPATLVDDLA 405
RL + SR P+ VL+AVVDVGPA V+DLA
Sbjct: 566 RLFKPGF*SRGPDXVLVAVVDVGPAGXVEDLA 471
Score = 27.2 bits (53), Expect(3) = 3e-038
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = -3 / -3
Query: 31 EPMKPLAPVT 2
EPMKPLAPVT
Sbjct: 100 EPMKPLAPVT 71
>gb|BI776330.2|BI776330 EBem04_SQ001_K08_R embryo, 12 DPA, no treatment, cv Optic, EBem04
Hordeum vulgare subsp. vulgare cDNA clone
EBem04_SQ001_K08 5', mRNA sequence
Length = 585
Score = 200 bits (432), Expect(2) = 2e-065
Identities = 80/111 (72%), Positives = 88/111 (79%)
Frame = +3 / +2
Query: 150 RLSFFRCXXXXXXXXXXXXRGCSGVFHLASPCTVDPVKDPQNQLMVPAVEGTLNVVRAXK 329
R+ FF C RGCSGVFHLASPCTVD V DPQ +L+VPAVEGTLNV+RA K
Sbjct: 242 RVRFFPCDLLDGAAMLAAARGCSGVFHLASPCTVDRVLDPQKELVVPAVEGTLNVLRAAK 421
Query: 330 DAGGVRRVVVTSSISAVVPNPGWPAGEVVDERCWTDIDYCEKNGVWYPASK 482
DAGGVRRVVVTSS+SAVVP+PGWPAGEV+DERCWTDIDYC+KNG P K
Sbjct: 422 DAGGVRRVVVTSSVSAVVPSPGWPAGEVLDERCWTDIDYCDKNGGLVPCFK 574
Score = 135 bits (289), Expect(2) = 1e-033
Identities = 62/108 (57%), Positives = 66/108 (61%)
Frame = -3 / -1
Query: 481 LEAGYQTPFFXXXXXXXXXXXXXXSPAGHPGLGTTAEMDEVTTTRRTPPASLXARTTFSV 302
L+ G + PF SPAG PGLGTTAE DEVTTTRRTPPASL AR+T SV
Sbjct: 573 LKQGTRPPFLSQ*SMSVQQRSSRTSPAGQPGLGTTAETDEVTTTRRTPPASLAARSTLSV 394
Query: 301 PSTAGTIS*FWGSLTGSTVQGDARWKTPEHXXXXXXXXXXXXXSQRKK 158
PSTAGT S FWGS T STVQG+ARWKTPE S KK
Sbjct: 393 PSTAGTTSSFWGSRTRSTVQGEARWKTPEQPRAAASMAAPSSRSHGKK 250
Score = 68.0 bits (142), Expect(2) = 2e-065
Identities = 28/38 (73%), Positives = 32/38 (84%)
Frame = +3 / +2
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAETDH 116
VTGASGFIGS VR LL RGY+V A VL+PDD+AET+H
Sbjct: 98 VTGASGFIGSVTVRLLLARGYSVHAAVLNPDDKAETEH 211
Score = 27.2 bits (53), Expect(2) = 1e-033
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = -3 / -1
Query: 31 EPMKPLAPVT 2
EPMKPLAPVT
Sbjct: 126 EPMKPLAPVT 97
>gb|CK122370.1|CK122370 BES1824103a12 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010A123 5-PRIME, mRNA sequence
Length = 463
Score = 237 bits (512), Expect(2) = 2e-064
Identities = 93/119 (78%), Positives = 101/119 (84%)
Frame = +3 / +2
Query: 150 RLSFFRCXXXXXXXXXXXXRGCSGVFHLASPCTVDPVKDPQNQLMVPAVEGTLNVVRAXK 329
R+ FF C RGCSGVFHLASPCTVD V DPQ +L+VPAVEGTLNV+RA K
Sbjct: 83 RVRFFPCDLLDGAAMLAAARGCSGVFHLASPCTVDRVLDPQKELVVPAVEGTLNVLRAAK 262
Query: 330 DAGGVRRVVVTSSISAVVPNPGWPAGEVVDERCWTDIDYCEKNGVWYPASKTLAEKAAW 506
DAGGVRRVVVTSS+SAVVP+PGWPAGEV+DERCWTDIDYC+KNGVWYPASKTLAEKAAW
Sbjct: 263 DAGGVRRVVVTSSVSAVVPSPGWPAGEVLDERCWTDIDYCDKNGVWYPASKTLAEKAAW 439
Score = 163 bits (351), Expect = 5e-040
Identities = 74/116 (63%), Positives = 76/116 (65%)
Frame = -3 / -2
Query: 505 HAAFSASVLEAGYQTPFFXXXXXXXXXXXXXXSPAGHPGLGTTAEMDEVTTTRRTPPASL 326
HAAFSASV EAGYQTPF SPAG PGLGTTAE DEVTTTRRTPPASL
Sbjct: 438 HAAFSASVFEAGYQTPFLSQ*SMSVQQRSSRTSPAGQPGLGTTAETDEVTTTRRTPPASL 259
Query: 325 XARTTFSVPSTAGTIS*FWGSLTGSTVQGDARWKTPEHXXXXXXXXXXXXXSQRKK 158
AR+T SVPSTAGT S FWGS T STVQG+ARWKTPE S KK
Sbjct: 258 AARSTLSVPSTAGTTSSFWGSRTRSTVQGEARWKTPEQPRAAASMAAPSSRSHGKK 91
Score = 27.6 bits (54), Expect(2) = 2e-064
Identities = 9/12 (75%), Positives = 12/12 (100%)
Frame = +3 / +2
Query: 81 VLDPDDRAETDH 116
VL+PDD+AET+H
Sbjct: 17 VLNPDDKAETEH 52
>gb|AW982197.2|AW982197 HVSMEg0002E02f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0002E02f, mRNA sequence
Length = 867
Score = 171 bits (367), Expect(2) = 2e-056
Identities = 70/109 (64%), Positives = 81/109 (74%)
Frame = +3 / +2
Query: 150 RLSFFRCXXXXXXXXXXXXRGCSGVFHLASPCTVDPVKDPQNQLMVPAVEGTLNVVRAXK 329
R+ FF C RGCSGVFHLASPCTVD V DPQ +L+VPAVEGTLNV+RA K
Sbjct: 242 RVRFFPCDLLDGACMLAAARGCSGVFHLASPCTVDRVLDPQKELVVPAVEGTLNVLRAVK 421
Query: 330 DAGGVRRVVVTSSISAVVPNPGWPAGEVVDERCWTDIDYCEKNGVWYPA 476
DAGGVRRVVVTS +SAVVP+PGW GEV +R WT+ D+ +KNGV P+
Sbjct: 422 DAGGVRRVVVTSYVSAVVPSPGWALGEVPHKRWWTNFDFWDKNGVMVPS 568
Score = 128 bits (274), Expect(2) = 4e-031
Identities = 57/86 (66%), Positives = 59/86 (68%)
Frame = -3 / -1
Query: 472 GYQTPFFXXXXXXXXXXXXXXSPAGHPGLGTTAEMDEVTTTRRTPPASLXARTTFSVPST 293
G TPF SP HPGLGTTAE EVTTTRRTPPASL AR+T SVPST
Sbjct: 564 GTMTPFLSQKSKLVHQRL*GTSPRAHPGLGTTAETYEVTTTRRTPPASLTARSTLSVPST 385
Query: 292 AGTIS*FWGSLTGSTVQGDARWKTPE 215
AGT S FWGS T STVQG+ARWKTPE
Sbjct: 384 AGTTSSFWGSRTRSTVQGEARWKTPE 307
Score = 68.0 bits (142), Expect(2) = 2e-056
Identities = 28/38 (73%), Positives = 32/38 (84%)
Frame = +3 / +2
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAETDH 116
VTGASGFIGS VR LL RGY+V A VL+PDD+AET+H
Sbjct: 98 VTGASGFIGSVTVRLLLARGYSVHAAVLNPDDKAETEH 211
Score = 27.2 bits (53), Expect(2) = 4e-031
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = -3 / -1
Query: 31 EPMKPLAPVT 2
EPMKPLAPVT
Sbjct: 126 EPMKPLAPVT 97
>gb|BG300073.1|BG300073 HVSMEb0011F07f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0011F07f, mRNA sequence
Length = 522
Score = 138 bits (296), Expect(2) = 9e-047
Identities = 57/83 (68%), Positives = 63/83 (75%)
Frame = +3 / +2
Query: 150 RLSFFRCXXXXXXXXXXXXRGCSGVFHLASPCTVDPVKDPQNQLMVPAVEGTLNVVRAXK 329
R+ FF C RGCSGVFHLASPCTVD V DP +L+VPAVEGTLNV+RA K
Sbjct: 242 RVRFFPCDLLDGAAMLAAARGCSGVFHLASPCTVDRVLDPHKELVVPAVEGTLNVLRAAK 421
Query: 330 DAGGVRRVVVTSSISAVVPNPGW 398
DAGGVRRVVVTSS+SAVVP+P W
Sbjct: 422 DAGGVRRVVVTSSVSAVVPSPRW 490
Score = 116 bits (248), Expect(2) = 8e-028
Identities = 49/59 (83%), Positives = 51/59 (86%)
Frame = -3 / -1
Query: 391 GLGTTAEMDEVTTTRRTPPASLXARTTFSVPSTAGTIS*FWGSLTGSTVQGDARWKTPE 215
GLGTTAE DEVTTTRRTPPASL AR+T SVPSTAGT S WGS T STVQG+ARWKTPE
Sbjct: 483 GLGTTAETDEVTTTRRTPPASLAARSTLSVPSTAGTTSSLWGSRTRSTVQGEARWKTPE 307
Score = 68.0 bits (142), Expect(2) = 9e-047
Identities = 28/38 (73%), Positives = 32/38 (84%)
Frame = +3 / +2
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAETDH 116
VTGASGFIGS VR LL RGY+V A VL+PDD+AET+H
Sbjct: 98 VTGASGFIGSVTVRLLLARGYSVHAAVLNPDDKAETEH 211
Score = 27.2 bits (53), Expect(2) = 8e-028
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = -3 / -1
Query: 31 EPMKPLAPVT 2
EPMKPLAPVT
Sbjct: 126 EPMKPLAPVT 97
>gb|CA030421.1|CA030421 HX07A07r HX Hordeum vulgare subsp. vulgare cDNA clone HX07A07
5-PRIME, mRNA sequence
Length = 436
Score = 133 bits (284), Expect(2) = 3e-045
Identities = 56/79 (70%), Positives = 61/79 (77%)
Frame = +3 / +2
Query: 150 RLSFFRCXXXXXXXXXXXXRGCSGVFHLASPCTVDPVKDPQNQLMVPAVEGTLNVVRAXK 329
R+ FF C RGCSGVFHLASPCTVD V DPQ +L+VPAVEGTLNV+RA K
Sbjct: 200 RVRFFPCDLLDGAAMLAAARGCSGVFHLASPCTVDRVLDPQKELVVPAVEGTLNVLRAAK 379
Query: 330 DAGGVRRVVVTSSISAVVP 386
DAGGVRRVVVTSS+SAVVP
Sbjct: 380 DAGGVRRVVVTSSVSAVVP 436
Score = 115 bits (245), Expect(2) = 9e-028
Identities = 51/76 (67%), Positives = 53/76 (69%)
Frame = -3 / -2
Query: 385 GTTAEMDEVTTTRRTPPASLXARTTFSVPSTAGTIS*FWGSLTGSTVQGDARWKTPEHXX 206
GTTAE DEVTTTRRTPPASL AR+T SVPSTAGT S FWGS T STVQG+ARWKTPE
Sbjct: 435 GTTAETDEVTTTRRTPPASLAARSTLSVPSTAGTTSSFWGSRTRSTVQGEARWKTPEQPR 256
Query: 205 XXXXXXXXXXXSQRKK 158
S KK
Sbjct: 255 AAASMAAPSSRSHGKK 208
Score = 68.0 bits (142), Expect(2) = 3e-045
Identities = 28/38 (73%), Positives = 32/38 (84%)
Frame = +3 / +2
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAETDH 116
VTGASGFIGS VR LL RGY+V A VL+PDD+AET+H
Sbjct: 56 VTGASGFIGSVTVRLLLARGYSVHAAVLNPDDKAETEH 169
Score = 27.2 bits (53), Expect(2) = 9e-028
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = -3 / -2
Query: 31 EPMKPLAPVT 2
EPMKPLAPVT
Sbjct: 84 EPMKPLAPVT 55
>gb|CV059539.1|CV059539 BNEL49c1 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL49c1 5' similar to putative
cinnamoyl-CoA reductase, mRNA sequence
Length = 499
Score = 117 bits (250), Expect(2) = 2e-040
Identities = 49/71 (69%), Positives = 53/71 (74%)
Frame = +3 / +3
Query: 150 RLSFFRCXXXXXXXXXXXXRGCSGVFHLASPCTVDPVKDPQNQLMVPAVEGTLNVVRAXK 329
R+ FF C RGCSGVFHLASPCTVD V DPQ +L+VPAVEGTLNV+RA K
Sbjct: 258 RVRFFPCDLLDGAAMLAAARGCSGVFHLASPCTVDRVLDPQKELVVPAVEGTLNVLRAAK 437
Query: 330 DAGGVRRVVVT 362
DAGGVRRVVVT
Sbjct: 438 DAGGVRRVVVT 470
Score = 98.7 bits (209), Expect(2) = 2e-022
Identities = 42/54 (77%), Positives = 44/54 (81%)
Frame = -3 / -1
Query: 376 AEMDEVTTTRRTPPASLXARTTFSVPSTAGTIS*FWGSLTGSTVQGDARWKTPE 215
A VTTTRRTPPASL AR+T SVPSTAGT S FWGS T STVQG+ARWKTPE
Sbjct: 484 AXPTRVTTTRRTPPASLAARSTLSVPSTAGTTSSFWGSRTRSTVQGEARWKTPE 323
Score = 68.0 bits (142), Expect(2) = 2e-040
Identities = 28/38 (73%), Positives = 32/38 (84%)
Frame = +3 / +3
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAETDH 116
VTGASGFIGS VR LL RGY+V A VL+PDD+AET+H
Sbjct: 114 VTGASGFIGSVTVRLLLARGYSVHAAVLNPDDKAETEH 227
Score = 27.2 bits (53), Expect(2) = 2e-022
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = -3 / -1
Query: 31 EPMKPLAPVT 2
EPMKPLAPVT
Sbjct: 142 EPMKPLAPVT 113
>gb|BU987846.1|BU987846 HF15O20r HF Hordeum vulgare subsp. vulgare cDNA clone HF15O20
5-PRIME, mRNA sequence
Length = 493
Score = 160 bits (344), Expect = 5e-039
Identities = 61/67 (91%), Positives = 66/67 (98%)
Frame = +3 / +3
Query: 306 LNVVRAXKDAGGVRRVVVTSSISAVVPNPGWPAGEVVDERCWTDIDYCEKNGVWYPASKT 485
LNV+RA KDAGGVRRVVVTSS+SAVVP+PGWPAGEV+DERCWTDIDYC+KNGVWYPASKT
Sbjct: 12 LNVLRAAKDAGGVRRVVVTSSVSAVVPSPGWPAGEVLDERCWTDIDYCDKNGVWYPASKT 191
Query: 486 LAEKAAW 506
LAEKAAW
Sbjct: 192 LAEKAAW 212
Score = 103 bits (220), Expect = 6e-022
Identities = 46/67 (68%), Positives = 47/67 (70%)
Frame = -3 / -1
Query: 505 HAAFSASVLEAGYQTPFFXXXXXXXXXXXXXXSPAGHPGLGTTAEMDEVTTTRRTPPASL 326
HAAFSASV EAGYQTPF SPAG PGLGTTAE DEVTTTRRTPPASL
Sbjct: 211 HAAFSASVFEAGYQTPFLSQ*SMSVQQRSSRTSPAGQPGLGTTAETDEVTTTRRTPPASL 32
Query: 325 XARTTFS 305
AR+T S
Sbjct: 31 AARSTLS 11
>gb|BU989665.1|BU989665 HF22F21r HF Hordeum vulgare subsp. vulgare cDNA clone HF22F21
5-PRIME, mRNA sequence
Length = 537
Score = 149 bits (320), Expect = 1e-035
Identities = 56/60 (93%), Positives = 60/60 (100%)
Frame = +3 / +3
Query: 327 KDAGGVRRVVVTSSISAVVPNPGWPAGEVVDERCWTDIDYCEKNGVWYPASKTLAEKAAW 506
KDAGGVRRVVVTSS+SAVVP+PGWPAGEV+DERCWTDIDYC+KNGVWYPASKTLAEKAAW
Sbjct: 6 KDAGGVRRVVVTSSVSAVVPSPGWPAGEVLDERCWTDIDYCDKNGVWYPASKTLAEKAAW 185
>gb|CA030770.1|CA030770 HX08B09r HX Hordeum vulgare subsp. vulgare cDNA clone HX08B09
5-PRIME, mRNA sequence
Length = 407
Score = 89.0 bits (188), Expect(2) = 3e-032
Identities = 36/57 (63%), Positives = 40/57 (70%)
Frame = +3 / +3
Query: 150 RLSFFRCXXXXXXXXXXXXRGCSGVFHLASPCTVDPVKDPQNQLMVPAVEGTLNVVR 320
R+ FF C RGCSGVFHLASPCTVD V DPQ +L+VPAVEGTLNV+R
Sbjct: 237 RVRFFPCDLLDGAAMLAAARGCSGVFHLASPCTVDRVLDPQKELVVPAVEGTLNVLR 407
Score = 68.0 bits (142), Expect(2) = 3e-032
Identities = 28/38 (73%), Positives = 32/38 (84%)
Frame = +3 / +3
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAETDH 116
VTGASGFIGS VR LL RGY+V A VL+PDD+AET+H
Sbjct: 93 VTGASGFIGSVTVRLLLARGYSVHAAVLNPDDKAETEH 206
>gb|BI960699.1|BI960699 HVSMEn0025O19f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0025O19f, mRNA sequence
Length = 661
Score = 104 bits (222), Expect(2) = 7e-030
Identities = 41/87 (47%), Positives = 56/87 (64%)
Frame = +3 / +2
Query: 246 TVDPVKDPQNQLMVPAVEGTLNVVRAXKDAGGVRRVVVTSSISAVVPNPGWPAGEVVDER 425
T PV D +++ PAV GTLN++ A ++G VRRVV+TSSI A+ +P A VVDE
Sbjct: 320 TASPVTDDPEEMVEPAVRGTLNIIDAAAESGTVRRVVLTSSIGAIAMDPNRGADAVVDES 499
Query: 426 CWTDIDYCEKNGVWYPASKTLAEKAAW 506
CW+D+++C+K WY K A AAW
Sbjct: 500 CWSDLEFCKKTKNWYCYGKAAAXXAAW 580
Score = 46.4 bits (95), Expect(2) = 7e-030
Identities = 20/32 (62%), Positives = 24/32 (75%)
Frame = +3 / +2
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDD 98
VTGA G+IGS LV+ LL +GY VR V +PDD
Sbjct: 101 VTGAGGYIGSWLVKLLLDKGYAVRGTVRNPDD 196
>gb|BG365391.1|BG365391 HVSMEi0002I06f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0002I06f, mRNA sequence
Length = 757
Score = 66.1 bits (138), Expect(3) = 9e-030
Identities = 24/55 (43%), Positives = 38/55 (69%)
Frame = +3 / +1
Query: 342 VRRVVVTSSISAVVPNPGWPAGEVVDERCWTDIDYCEKNGVWYPASKTLAEKAAW 506
V++V+ SS +AV NP WP ++ DE CW+D D+C+KN W +K +AE+A++
Sbjct: 412 VQKVIGLSSTAAVDFNPNWPQDKLKDESCWSDKDFCQKNEDWCSVAKIVAEQASF 576
Score = 57.0 bits (118), Expect(3) = 9e-030
Identities = 22/57 (38%), Positives = 32/57 (56%)
Frame = +3 / +1
Query: 153 LSFFRCXXXXXXXXXXXXRGCSGVFHLASPCTVDPVKDPQNQLMVPAVEGTLNVVRA 323
L FR GC GVFHLA+P D + DP+++++ PA +GT NV++A
Sbjct: 226 LHLFRADVLDYDTLTRAFEGCEGVFHLATPVPEDKIGDPESEVLAPAGKGTSNVLKA 396
Score = 44.1 bits (90), Expect(3) = 9e-030
Identities = 20/32 (62%), Positives = 21/32 (65%)
Frame = +3 / +1
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDD 98
VTG GFI S LV+ LL RGY V A V DP D
Sbjct: 85 VTGGGGFIASWLVKLLLSRGYAVNATVRDPSD 180
>gb|BQ763022.1|BQ763022 EBro02_SQ006_M20_R root, 3 week, hydroponic grown, low nitrogen, cv
Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone
EBro02_SQ006_M20 5', mRNA sequence
Length = 626
Score = 80.3 bits (169), Expect(3) = 2e-029
Identities = 30/67 (44%), Positives = 43/67 (64%)
Frame = +3 / +1
Query: 270 QNQLMVPAVEGTLNVVRAXKDAGGVRRVVVTSSISAVVPNPGWPAGEVVDERCWTDIDYC 449
+ +++ PAV GT NV+ A D G +RRVV+TSSI AV +P E DE CW+D+++C
Sbjct: 418 RKKMIEPAVSGTRNVINAAADVGSIRRVVMTSSIGAVYMDPRRSPDEEADETCWSDLEFC 597
Query: 450 EKNGVWY 470
+ WY
Sbjct: 598 KNTKNWY 618
Score = 45.5 bits (93), Expect(3) = 2e-029
Identities = 21/38 (55%), Positives = 24/38 (63%)
Frame = +3 / +3
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAETDH 116
VTGA GFI S LV+ LL +GY V V +PDD A H
Sbjct: 171 VTGAGGFIASWLVKLLLEKGYAVHGTVRNPDDVARNAH 284
Score = 40.5 bits (82), Expect(3) = 2e-029
Identities = 17/39 (43%), Positives = 19/39 (48%)
Frame = +3 / +3
Query: 150 RLSFFRCXXXXXXXXXXXXRGCSGVFHLASPCTVDPVKD 266
RL+ FR RGC GVFH A P T DP K+
Sbjct: 312 RLTLFRVDLLDKESLVAAFRGCQGVFHTACPVTDDPEKN 428
>gb|BG344152.2|BG344152 HVSMEg0007N17f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0007N17f, mRNA sequence
Length = 796
Score = 104 bits (221), Expect(2) = 4e-029
Identities = 44/87 (50%), Positives = 55/87 (63%)
Frame = +3 / +3
Query: 246 TVDPVKDPQNQLMVPAVEGTLNVVRAXKDAGGVRRVVVTSSISAVVPNPGWPAGEVVDER 425
T PV D Q++ PAV GT V+ A DAG VRRVV TSSI AV +P VVDE
Sbjct: 372 TASPVTDDPEQMVEPAVRGTEYVIDAAADAGTVRRVVFTSSIGAVTMDPNRGPDVVVDES 551
Query: 426 CWTDIDYCEKNGVWYPASKTLAEKAAW 506
CW+D+++C+K WY K +AE+AAW
Sbjct: 552 CWSDLEFCKKTKNWYCYGKAVAEQAAW 632
Score = 44.6 bits (91), Expect(2) = 4e-029
Identities = 19/32 (59%), Positives = 24/32 (75%)
Frame = +3 / +3
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDD 98
VTGA+G+I S LV+ LL RGY V+ V +PDD
Sbjct: 153 VTGAAGYIASWLVKLLLERGYTVKGTVRNPDD 248
>gb|BI958105.1|BI958105 HVSMEn0013G15f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0013G15f, mRNA sequence
Length = 655
Score = 102 bits (218), Expect(2) = 8e-029
Identities = 43/87 (49%), Positives = 55/87 (63%)
Frame = +3 / +2
Query: 246 TVDPVKDPQNQLMVPAVEGTLNVVRAXKDAGGVRRVVVTSSISAVVPNPGWPAGEVVDER 425
T PV D Q++ PAV GT V+ A DAG VRRVV TSSI AV +P VVDE
Sbjct: 371 TASPVTDDPEQMVEPAVRGTEYVIDAAADAGTVRRVVFTSSIGAVTMDPNRGPDVVVDES 550
Query: 426 CWTDIDYCEKNGVWYPASKTLAEKAAW 506
CW+D+++C+K WY K +A++AAW
Sbjct: 551 CWSDLEFCKKTKNWYCYGKAVADQAAW 631
Score = 44.6 bits (91), Expect(2) = 8e-029
Identities = 19/32 (59%), Positives = 24/32 (75%)
Frame = +3 / +2
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDD 98
VTGA+G+I S LV+ LL RGY V+ V +PDD
Sbjct: 152 VTGAAGYIASWLVKLLLERGYTVKGTVRNPDD 247
>gb|BI960557.1|BI960557 HVSMEn0025A09f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0025A09f, mRNA sequence
Length = 669
Score = 102 bits (218), Expect(2) = 9e-029
Identities = 43/87 (49%), Positives = 55/87 (63%)
Frame = +3 / +2
Query: 246 TVDPVKDPQNQLMVPAVEGTLNVVRAXKDAGGVRRVVVTSSISAVVPNPGWPAGEVVDER 425
T PV D Q++ PAV GT V+ A DAG VRRVV TSSI AV +P VVDE
Sbjct: 374 TASPVTDDPEQMVEPAVRGTEYVIDAAADAGTVRRVVFTSSIGAVTMDPNRGPDVVVDES 553
Query: 426 CWTDIDYCEKNGVWYPASKTLAEKAAW 506
CW+D+++C+K WY K +A++AAW
Sbjct: 554 CWSDLEFCKKTKNWYCYGKAVADQAAW 634
Score = 44.6 bits (91), Expect(2) = 9e-029
Identities = 19/32 (59%), Positives = 24/32 (75%)
Frame = +3 / +2
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDD 98
VTGA+G+I S LV+ LL RGY V+ V +PDD
Sbjct: 155 VTGAAGYIASWLVKLLLERGYTVKGTVRNPDD 250
>gb|CA032017.1|CA032017 HX11M09r HX Hordeum vulgare subsp. vulgare cDNA clone HX11M09
5-PRIME, mRNA sequence
Length = 647
Score = 71.6 bits (150), Expect(3) = 4e-028
Identities = 28/52 (53%), Positives = 35/52 (67%)
Frame = +3 / +2
Query: 342 VRRVVVTSSISAVVPNPGWPAGEVVDERCWTDIDYCEKNGVWYPASKTLAEK 497
V+RVV+ SS++AV NP WP G+ DE W+D D C K WY SKTLAE+
Sbjct: 491 VKRVVMVSSVAAVSNNPNWPKGKFFDEDSWSDEDLCRKGEDWYFLSKTLAER 646
Score = 56.1 bits (116), Expect(3) = 4e-028
Identities = 24/52 (46%), Positives = 35/52 (67%)
Frame = +3 / +2
Query: 210 GCSGVFHLASPCTVDPVKDPQNQLMVPAVEGTLNVVRAXKDAGGVRRVVVTS 365
GC GVFH+ASP +P+ +++ PAV GTLNV++A +A R V+V+S
Sbjct: 362 GCDGVFHVASPVPSGRSTNPEEEVIAPAVTGTLNVLKACYEAKVKRVVMVSS 517
Score = 34.1 bits (68), Expect(3) = 4e-028
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = +3 / +2
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAETDH 116
VTGA GFI S LV+ LL +G+ G + A+ H
Sbjct: 161 VTGAGGFIASWLVKLLLSKGHYTVRGTVRDPGNAKNAH 274
>gb|BI959031.1|BI959031 HVSMEn0017M21f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0017M21f, mRNA sequence
Length = 646
Score = 105 bits (225), Expect(2) = 3e-027
Identities = 41/87 (47%), Positives = 57/87 (65%)
Frame = +3 / +3
Query: 246 TVDPVKDPQNQLMVPAVEGTLNVVRAXKDAGGVRRVVVTSSISAVVPNPGWPAGEVVDER 425
T PV D +++ PAV GTLN++ A ++G VRRVV+TSSI A+ +P A VVDE
Sbjct: 216 TASPVTDDPEEMVEPAVRGTLNIIDAAAESGTVRRVVLTSSIGAIAMDPNRGADAVVDES 395
Query: 426 CWTDIDYCEKNGVWYPASKTLAEKAAW 506
CW+D+++C+K WY K A +AAW
Sbjct: 396 CWSDLEFCKKTKNWYCYGKAAAXRAAW 476
Score = 36.3 bits (73), Expect(2) = 3e-027
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +3 / +3
Query: 9 GASGFIGSTLVRGLLGRGYNVRAGVLDPDD 98
GA G++G +V+ LL +GY VR V +PDD
Sbjct: 3 GAGGYMGWGVVKLLLDKGYAVRGTVRNPDD 92
>gb|BE559021.2|BE559021 HV_CEb0022F12f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0022F12f, mRNA sequence
Length = 697
Score = 69.8 bits (146), Expect(3) = 3e-027
Identities = 28/55 (50%), Positives = 35/55 (63%)
Frame = +3 / +1
Query: 342 VRRVVVTSSISAVVPNPGWPAGEVVDERCWTDIDYCEKNGVWYPASKTLAEKAAW 506
V+RVV+ SS +AV NP WP G+V E W+D D C K WY SKT AE+ A+
Sbjct: 415 VKRVVIVSSCAAVFNNPNWPKGKVFTEDSWSDEDLCRKGEDWYLLSKTRAEREAF 579
Score = 57.9 bits (120), Expect(3) = 3e-027
Identities = 24/52 (46%), Positives = 35/52 (67%)
Frame = +3 / +1
Query: 210 GCSGVFHLASPCTVDPVKDPQNQLMVPAVEGTLNVVRAXKDAGGVRRVVVTS 365
GC GVFH+ASP +P+ +++ PAV GTLNV++A +A R V+V+S
Sbjct: 286 GCEGVFHVASPVPSGRSTNPEEEVIAPAVTGTLNVLKACNEAKVKRVVIVSS 441
Score = 30.9 bits (61), Expect(3) = 3e-027
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +3 / +1
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAETDH 116
VTGA GF+ S LV+ LL + + G + A+ H
Sbjct: 85 VTGAGGFVASWLVKLLLSKAHYTVRGTVRDPGNAKNAH 198
>gb|BJ463463.1|BJ463463 BJ463463 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags32a03 5', mRNA sequence
Length = 662
Score = 69.8 bits (146), Expect(3) = 3e-027
Identities = 28/55 (50%), Positives = 35/55 (63%)
Frame = +3 / +1
Query: 342 VRRVVVTSSISAVVPNPGWPAGEVVDERCWTDIDYCEKNGVWYPASKTLAEKAAW 506
V+RVV+ SS +AV NP WP G+V E W+D D C K WY SKT AE+ A+
Sbjct: 388 VKRVVIVSSCAAVFNNPNWPKGKVFTEDSWSDEDLCRKGEDWYLLSKTRAEREAF 552
Score = 57.9 bits (120), Expect(3) = 3e-027
Identities = 24/52 (46%), Positives = 35/52 (67%)
Frame = +3 / +1
Query: 210 GCSGVFHLASPCTVDPVKDPQNQLMVPAVEGTLNVVRAXKDAGGVRRVVVTS 365
GC GVFH+ASP +P+ +++ PAV GTLNV++A +A R V+V+S
Sbjct: 259 GCEGVFHVASPVPSGRSTNPEEEVIAPAVTGTLNVLKACNEAKVKRVVIVSS 414
Score = 30.9 bits (61), Expect(3) = 3e-027
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +3 / +1
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAETDH 116
VTGA GF+ S LV+ LL + + G + A+ H
Sbjct: 58 VTGAGGFVASWLVKLLLSKAHYTVRGTVRDPGNAKNAH 171
>gb|BJ464137.1|BJ464137 BJ464137 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags33a09 5', mRNA sequence
Length = 663
Score = 69.8 bits (146), Expect(3) = 3e-027
Identities = 28/55 (50%), Positives = 35/55 (63%)
Frame = +3 / +1
Query: 342 VRRVVVTSSISAVVPNPGWPAGEVVDERCWTDIDYCEKNGVWYPASKTLAEKAAW 506
V+RVV+ SS +AV NP WP G+V E W+D D C K WY SKT AE+ A+
Sbjct: 406 VKRVVIVSSCAAVFNNPNWPKGKVFTEDSWSDEDLCRKGEDWYLLSKTRAEREAF 570
Score = 57.9 bits (120), Expect(3) = 3e-027
Identities = 24/52 (46%), Positives = 35/52 (67%)
Frame = +3 / +1
Query: 210 GCSGVFHLASPCTVDPVKDPQNQLMVPAVEGTLNVVRAXKDAGGVRRVVVTS 365
GC GVFH+ASP +P+ +++ PAV GTLNV++A +A R V+V+S
Sbjct: 277 GCEGVFHVASPVPSGRSTNPEEEVIAPAVTGTLNVLKACNEAKVKRVVIVSS 432
Score = 30.9 bits (61), Expect(3) = 3e-027
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +3 / +1
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAETDH 116
VTGA GF+ S LV+ LL + + G + A+ H
Sbjct: 76 VTGAGGFVASWLVKLLLSKAHYTVRGTVRDPGNAKNAH 189
>gb|AL506722.1|AL506722 AL506722 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY04A23T 5',
mRNA sequence
Length = 619
Score = 69.8 bits (146), Expect(3) = 3e-027
Identities = 28/55 (50%), Positives = 35/55 (63%)
Frame = +3 / +2
Query: 342 VRRVVVTSSISAVVPNPGWPAGEVVDERCWTDIDYCEKNGVWYPASKTLAEKAAW 506
V+RVV+ SS +AV NP WP G+V E W+D D C K WY SKT AE+ A+
Sbjct: 353 VKRVVIVSSCAAVFNNPNWPKGKVFTEDSWSDEDLCRKGEDWYLLSKTRAEREAF 517
Score = 57.9 bits (120), Expect(3) = 3e-027
Identities = 24/52 (46%), Positives = 35/52 (67%)
Frame = +3 / +2
Query: 210 GCSGVFHLASPCTVDPVKDPQNQLMVPAVEGTLNVVRAXKDAGGVRRVVVTS 365
GC GVFH+ASP +P+ +++ PAV GTLNV++A +A R V+V+S
Sbjct: 224 GCEGVFHVASPVPSGRSTNPEEEVIAPAVTGTLNVLKACNEAKVKRVVIVSS 379
Score = 30.9 bits (61), Expect(3) = 3e-027
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +3 / +2
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAETDH 116
VTGA GF+ S LV+ LL + + G + A+ H
Sbjct: 23 VTGAGGFVASWLVKLLLSKAHYTVRGTVRDPGNAKNAH 136
>gb|AV915311.1|AV915311 AV915311 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags13n08 5', mRNA sequence
Length = 578
Score = 69.8 bits (146), Expect(3) = 3e-027
Identities = 28/55 (50%), Positives = 35/55 (63%)
Frame = +3 / +2
Query: 342 VRRVVVTSSISAVVPNPGWPAGEVVDERCWTDIDYCEKNGVWYPASKTLAEKAAW 506
V+RVV+ SS +AV NP WP G+V E W+D D C K WY SKT AE+ A+
Sbjct: 389 VKRVVIVSSCAAVFNNPNWPKGKVFTEDSWSDEDLCRKGEDWYLLSKTRAEREAF 553
Score = 57.9 bits (120), Expect(3) = 3e-027
Identities = 24/52 (46%), Positives = 35/52 (67%)
Frame = +3 / +2
Query: 210 GCSGVFHLASPCTVDPVKDPQNQLMVPAVEGTLNVVRAXKDAGGVRRVVVTS 365
GC GVFH+ASP +P+ +++ PAV GTLNV++A +A R V+V+S
Sbjct: 260 GCEGVFHVASPVPSGRSTNPEEEVIAPAVTGTLNVLKACNEAKVKRVVIVSS 415
Score = 30.9 bits (61), Expect(3) = 3e-027
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +3 / +2
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAETDH 116
VTGA GF+ S LV+ LL + + G + A+ H
Sbjct: 59 VTGAGGFVASWLVKLLLSKAHYTVRGTVRDPGNAKNAH 172
>gb|CA007645.1|CA007645 HU08J12r HU Hordeum vulgare subsp. vulgare cDNA clone HU08J12
5-PRIME, mRNA sequence
Length = 511
Score = 68.0 bits (142), Expect(3) = 1e-026
Identities = 27/52 (51%), Positives = 33/52 (63%)
Frame = +3 / +1
Query: 342 VRRVVVTSSISAVVPNPGWPAGEVVDERCWTDIDYCEKNGVWYPASKTLAEK 497
V+RVV+ SS +AV NP WP G+V E W+D D C K WY SKT AE+
Sbjct: 355 VKRVVIVSSCAAVFNNPNWPKGKVFTEDSWSDEDLCRKGEDWYLLSKTRAER 510
Score = 57.9 bits (120), Expect(3) = 1e-026
Identities = 24/52 (46%), Positives = 35/52 (67%)
Frame = +3 / +1
Query: 210 GCSGVFHLASPCTVDPVKDPQNQLMVPAVEGTLNVVRAXKDAGGVRRVVVTS 365
GC GVFH+ASP +P+ +++ PAV GTLNV++A +A R V+V+S
Sbjct: 226 GCEGVFHVASPVPSGRSTNPEEEVIAPAVTGTLNVLKACNEAKVKRVVIVSS 381
Score = 30.9 bits (61), Expect(3) = 1e-026
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +3 / +1
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAETDH 116
VTGA GF+ S LV+ LL + + G + A+ H
Sbjct: 25 VTGAGGFVASWLVKLLLSKAHYTVRGTVRDPGNAKNAH 138
>gb|BG301229.1|BG301229 HVSMEb0020B01f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0020B01f, mRNA sequence
Length = 893
Score = 95.5 bits (202), Expect(2) = 2e-026
Identities = 41/87 (47%), Positives = 52/87 (59%)
Frame = +3 / +2
Query: 246 TVDPVKDPQNQLMVPAVEGTLNVVRAXKDAGGVRRVVVTSSISAVVPNPGWPAGEVVDER 425
T PV D Q++ PAV GT V+ A DAG VRRVV TSSI AV +P VVDE
Sbjct: 368 TASPVTDDPEQMVEPAVRGTEYVIDAAADAGTVRRVVFTSSIGAVTMDPNRGPDVVVDES 547
Query: 426 CWTDIDYCEKNGVWYPASKTLAEKAAW 506
CW+D+++C+ WY +A+ AAW
Sbjct: 548 CWSDLEFCKITKNWYCYCNAVADHAAW 628
Score = 44.6 bits (91), Expect(2) = 2e-026
Identities = 19/32 (59%), Positives = 24/32 (75%)
Frame = +3 / +2
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDD 98
VTGA+G+I S LV+ LL RGY V+ V +PDD
Sbjct: 149 VTGAAGYIASWLVKLLLERGYTVKGTVRNPDD 244
>gb|BM816674.1|BM816674 HB01C06_T3.ab1 HB Hordeum vulgare subsp. vulgare cDNA clone
HB01C06_T3.ab1 similar to Aldehyde reductase,Hydrogen
dehydrogenase,Alcohol dehydrogenase,Cinnamyl-alcohol
dehydrogenase,Hydrogenase,Cytochrome-c3
hydrogenase,Cinnamoyl-CoA reductase,Transferred entry:
1.18.99.1,Carbonyl reductase (NADPH),Dihydrokaempferol
4-reductase,, mRNA sequence
Length = 847
Score = 82.2 bits (173), Expect(3) = 2e-026
Identities = 38/83 (45%), Positives = 50/83 (60%)
Frame = +3 / +1
Query: 258 VKDPQNQLMVPAVEGTLNVVRAXKDAGGVRRVVVTSSISAVVPNPGWPAGEVVDERCWTD 437
VKDP+ +L+ PAV GTLNV+R+ K A R +V +S + VVDE ++
Sbjct: 337 VKDPKAELLDPAVNGTLNVLRSCKKASIKRVIVTSSMAAVAYNGKPRTPDVVVDETWFSS 516
Query: 438 IDYCEKNGVWYPASKTLAEKAAW 506
+ CEKN WY SKTLAE+AAW
Sbjct: 517 AEVCEKNKQWYVLSKTLAEEAAW 585
Score = 47.3 bits (97), Expect(3) = 2e-026
Identities = 23/38 (60%), Positives = 26/38 (68%)
Frame = +3 / +1
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAETDH 116
VTGASG+I S LV+ LL RGY VRA V D D +T H
Sbjct: 91 VTGASGYIASWLVKLLLHRGYTVRATVRDTADPKKTLH 204
Score = 26.3 bits (51), Expect(3) = 2e-026
Identities = 11/31 (35%), Positives = 12/31 (38%)
Frame = +3 / +1
Query: 150 RLSFFRCXXXXXXXXXXXXRGCSGVFHLASP 242
RL F+ GC VFH ASP
Sbjct: 232 RLHLFKASLLEEGTFDAAIAGCDCVFHTASP 324
>gb|BF255832.2|BF255832 HVSMEf0007P02f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0007P02f, mRNA sequence
Length = 837
Score = 82.2 bits (173), Expect(3) = 2e-026
Identities = 38/83 (45%), Positives = 50/83 (60%)
Frame = +3 / +2
Query: 258 VKDPQNQLMVPAVEGTLNVVRAXKDAGGVRRVVVTSSISAVVPNPGWPAGEVVDERCWTD 437
VKDP+ +L+ PAV GTLNV+R+ K A R +V +S + VVDE ++
Sbjct: 359 VKDPKAELLDPAVNGTLNVLRSCKKASIKRVIVTSSMAAVAYNGKPRTPDVVVDETWFSS 538
Query: 438 IDYCEKNGVWYPASKTLAEKAAW 506
+ CEKN WY SKTLAE+AAW
Sbjct: 539 AEVCEKNKQWYVLSKTLAEEAAW 607
Score = 47.3 bits (97), Expect(3) = 2e-026
Identities = 23/38 (60%), Positives = 26/38 (68%)
Frame = +3 / +2
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAETDH 116
VTGASG+I S LV+ LL RGY VRA V D D +T H
Sbjct: 113 VTGASGYIASWLVKLLLHRGYTVRATVRDTADPKKTLH 226
Score = 26.3 bits (51), Expect(3) = 2e-026
Identities = 11/31 (35%), Positives = 12/31 (38%)
Frame = +3 / +2
Query: 150 RLSFFRCXXXXXXXXXXXXRGCSGVFHLASP 242
RL F+ GC VFH ASP
Sbjct: 254 RLHLFKASLLEEGTFDAAIAGCDCVFHTASP 346
>gb|BU986537.1|BU986537 HF12C17r HF Hordeum vulgare subsp. vulgare cDNA clone HF12C17
5-PRIME, mRNA sequence
Length = 683
Score = 82.2 bits (173), Expect(3) = 2e-026
Identities = 38/83 (45%), Positives = 50/83 (60%)
Frame = +3 / +3
Query: 258 VKDPQNQLMVPAVEGTLNVVRAXKDAGGVRRVVVTSSISAVVPNPGWPAGEVVDERCWTD 437
VKDP+ +L+ PAV GTLNV+R+ K A R +V +S + VVDE ++
Sbjct: 330 VKDPKAELLDPAVNGTLNVLRSCKKASIKRVIVTSSMAAVAYNGKPRTPDVVVDETWFSS 509
Query: 438 IDYCEKNGVWYPASKTLAEKAAW 506
+ CEKN WY SKTLAE+AAW
Sbjct: 510 AEVCEKNQQWYVLSKTLAEEAAW 578
Score = 47.3 bits (97), Expect(3) = 2e-026
Identities = 23/38 (60%), Positives = 26/38 (68%)
Frame = +3 / +3
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAETDH 116
VTGASG+I S LV+ LL RGY VRA V D D +T H
Sbjct: 84 VTGASGYIASWLVKLLLHRGYTVRATVRDTADPKKTLH 197
Score = 26.3 bits (51), Expect(3) = 2e-026
Identities = 11/31 (35%), Positives = 12/31 (38%)
Frame = +3 / +3
Query: 150 RLSFFRCXXXXXXXXXXXXRGCSGVFHLASP 242
RL F+ GC VFH ASP
Sbjct: 225 RLHLFKASLLEEGTFDAAIAGCDCVFHTASP 317
>gb|BQ470739.1|BQ470739 HX03O06r HX Hordeum vulgare subsp. vulgare cDNA clone HX03O06
5-PRIME, mRNA sequence
Length = 667
Score = 82.2 bits (173), Expect(3) = 2e-026
Identities = 38/83 (45%), Positives = 50/83 (60%)
Frame = +3 / +2
Query: 258 VKDPQNQLMVPAVEGTLNVVRAXKDAGGVRRVVVTSSISAVVPNPGWPAGEVVDERCWTD 437
VKDP+ +L+ PAV GTLNV+R+ K A R +V +S + VVDE ++
Sbjct: 314 VKDPKAELLDPAVNGTLNVLRSCKKASIKRVIVTSSMAAVAYNGKPRTPDVVVDETWFSS 493
Query: 438 IDYCEKNGVWYPASKTLAEKAAW 506
+ CEKN WY SKTLAE+AAW
Sbjct: 494 AEVCEKNQQWYVLSKTLAEEAAW 562
Score = 47.3 bits (97), Expect(3) = 2e-026
Identities = 23/38 (60%), Positives = 26/38 (68%)
Frame = +3 / +2
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAETDH 116
VTGASG+I S LV+ LL RGY VRA V D D +T H
Sbjct: 68 VTGASGYIASWLVKLLLHRGYTVRATVRDTADPKKTLH 181
Score = 26.3 bits (51), Expect(3) = 2e-026
Identities = 11/31 (35%), Positives = 12/31 (38%)
Frame = +3 / +2
Query: 150 RLSFFRCXXXXXXXXXXXXRGCSGVFHLASP 242
RL F+ GC VFH ASP
Sbjct: 209 RLHLFKASLLEEGTFDAAIAGCDCVFHTASP 301
>gb|AL505150.1|AL505150 AL505150 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW07I24V 5', mRNA sequence
Length = 700
Score = 82.2 bits (173), Expect(3) = 3e-026
Identities = 38/83 (45%), Positives = 50/83 (60%)
Frame = +3 / +1
Query: 258 VKDPQNQLMVPAVEGTLNVVRAXKDAGGVRRVVVTSSISAVVPNPGWPAGEVVDERCWTD 437
VKDP+ +L+ PAV GTLNV+R+ K A R +V +S + VVDE ++
Sbjct: 355 VKDPKAELLDPAVNGTLNVLRSCKKASIKRVIVTSSMAAVAYNGKPRTPDVVVDETWFSS 534
Query: 438 IDYCEKNGVWYPASKTLAEKAAW 506
+ CEKN WY SKTLAE+AAW
Sbjct: 535 AEVCEKNQQWYVLSKTLAEEAAW 603
Score = 46.9 bits (96), Expect(3) = 3e-026
Identities = 23/38 (60%), Positives = 26/38 (68%)
Frame = +3 / +1
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAETDH 116
VTGASG+I S LV+ LL RGY VRA V D D +T H
Sbjct: 109 VTGASGYIXSWLVKLLLHRGYTVRATVRDTADPKKTLH 222
Score = 26.3 bits (51), Expect(3) = 3e-026
Identities = 11/31 (35%), Positives = 12/31 (38%)
Frame = +3 / +1
Query: 150 RLSFFRCXXXXXXXXXXXXRGCSGVFHLASP 242
RL F+ GC VFH ASP
Sbjct: 250 RLHLFKASLLEEGTFDAAIAGCDCVFHTASP 342
>gb|BF263685.3|BF263685 HV_CEa0007G08f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0007G08f, mRNA sequence
Length = 819
Score = 94.1 bits (199), Expect(2) = 3e-026
Identities = 39/86 (45%), Positives = 54/86 (62%)
Frame = +3 / +1
Query: 246 TVDPVKDPQNQLMVPAVEGTLNVVRAXKDAGGVRRVVVTSSISAVVPNPGWPAGEVVDER 425
T PV D +++ PAV GT V+ A +G VRRVV+TSSI AV +P VVDE
Sbjct: 295 TASPVTDDPEEMVEPAVRGTRYVIDAAAQSGTVRRVVLTSSIGAVAMDPSRDPDAVVDES 474
Query: 426 CWTDIDYCEKNGVWYPASKTLAEKAA 503
CW+++++C+K WY KT+AE+ A
Sbjct: 475 CWSNLEFCKKTKNWYCYGKTVAEREA 552
Score = 45.1 bits (92), Expect(2) = 3e-026
Identities = 19/32 (59%), Positives = 24/32 (75%)
Frame = +3 / +1
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDD 98
VTGA G+IGS +V+ LL +GY VR V +PDD
Sbjct: 76 VTGAGGYIGSWIVKLLLEKGYAVRGTVRNPDD 171
>gb|BF066116.1|BF066116 HV_CEb0014O07f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0014O07f, mRNA sequence
Length = 821
Score = 90.0 bits (190), Expect(3) = 3e-026
Identities = 34/76 (44%), Positives = 48/76 (63%)
Frame = +3 / +1
Query: 276 QLMVPAVEGTLNVVRAXKDAGGVRRVVVTSSISAVVPNPGWPAGEVVDERCWTDIDYCEK 455
Q++ PAV GT NV++A A VR VVV+S ++ + WP G++ DE CW+D ++C
Sbjct: 478 QMLGPAVSGTTNVLKAASAANAVRVVVVSSMVAVEINPKDWPQGKIRDESCWSDKEFCRS 657
Query: 456 NGVWYPASKTLAEKAA 503
N WYP +K AE AA
Sbjct: 658 NQSWYPVAKIAAEAAA 705
Score = 35.0 bits (70), Expect(3) = 3e-026
Identities = 16/27 (59%), Positives = 18/27 (66%)
Frame = +3 / +2
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGV 83
VTGA G+I S LV+ LL RGY V V
Sbjct: 86 VTGAGGYIASWLVKLLLSRGYAVHGTV 166
Score = 32.2 bits (64), Expect(3) = 3e-026
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +3 / +2
Query: 210 GCSGVFHLASPCTVDPVKDPQ 272
GC GVFH+A+P + + DP+
Sbjct: 284 GCQGVFHVATPVPSEIITDPE 346
>gb|BF066138.1|BF066138 HV_CEb0014P07f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0014P07f, mRNA sequence
Length = 821
Score = 90.0 bits (190), Expect(3) = 3e-026
Identities = 34/76 (44%), Positives = 48/76 (63%)
Frame = +3 / +1
Query: 276 QLMVPAVEGTLNVVRAXKDAGGVRRVVVTSSISAVVPNPGWPAGEVVDERCWTDIDYCEK 455
Q++ PAV GT NV++A A VR VVV+S ++ + WP G++ DE CW+D ++C
Sbjct: 478 QMLGPAVSGTTNVLKAASAANAVRVVVVSSMVAVEINPKDWPQGKIRDESCWSDKEFCRS 657
Query: 456 NGVWYPASKTLAEKAA 503
N WYP +K AE AA
Sbjct: 658 NQSWYPVAKIAAEAAA 705
Score = 35.0 bits (70), Expect(3) = 3e-026
Identities = 16/27 (59%), Positives = 18/27 (66%)
Frame = +3 / +2
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGV 83
VTGA G+I S LV+ LL RGY V V
Sbjct: 86 VTGAGGYIASWLVKLLLSRGYAVHGTV 166
Score = 32.2 bits (64), Expect(3) = 3e-026
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +3 / +2
Query: 210 GCSGVFHLASPCTVDPVKDPQ 272
GC GVFH+A+P + + DP+
Sbjct: 284 GCQGVFHVATPVPSEIITDPE 346
>gb|CA013420.1|CA013420 HT08G10r HT Hordeum vulgare subsp. vulgare cDNA clone HT08G10
5-PRIME, mRNA sequence
Length = 535
Score = 83.1 bits (175), Expect(2) = 7e-026
Identities = 30/55 (54%), Positives = 40/55 (72%)
Frame = +3 / +2
Query: 342 VRRVVVTSSISAVVPNPGWPAGEVVDERCWTDIDYCEKNGVWYPASKTLAEKAAW 506
V+RVV+ SS++AV+ NP WP G+ +DE CW+D+DYC WY SKTLAE A+
Sbjct: 257 VKRVVMVSSVAAVMTNPSWPEGKPMDEDCWSDVDYCRTTENWYNLSKTLAELQAF 421
Score = 53.3 bits (110), Expect(2) = 7e-026
Identities = 22/52 (42%), Positives = 34/52 (65%)
Frame = +3 / +2
Query: 210 GCSGVFHLASPCTVDPVKDPQNQLMVPAVEGTLNVVRAXKDAGGVRRVVVTS 365
GC VFH+A P + + +P+ L+ PAV GT+NV++A +A R V+V+S
Sbjct: 128 GCDVVFHVACPVLANHIPNPEADLIAPAVTGTMNVLKACSEAKVKRVVMVSS 283
>gb|AW982651.2|AW982651 HVSMEg0003N13f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0003N13f, mRNA sequence
Length = 1042
Score = 80.3 bits (169), Expect(3) = 7e-026
Identities = 37/83 (44%), Positives = 49/83 (59%)
Frame = +3 / +1
Query: 258 VKDPQNQLMVPAVEGTLNVVRAXKDAGGVRRVVVTSSISAVVPNPGWPAGEVVDERCWTD 437
VKDP+ +L+ P V GTLNV+R+ K A R +V +S + VVDE ++
Sbjct: 283 VKDPKAELLDPTVNGTLNVLRSCKKASIKRVIVTSSMAACAYNGKPRTPDVVVDETWFSS 462
Query: 438 IDYCEKNGVWYPASKTLAEKAAW 506
+ CEKN WY SKTLAE+AAW
Sbjct: 463 AEVCEKNKQWYVLSKTLAEEAAW 531
Score = 47.3 bits (97), Expect(3) = 7e-026
Identities = 23/38 (60%), Positives = 26/38 (68%)
Frame = +3 / +1
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAETDH 116
VTGASG+I S LV+ LL RGY VRA V D D +T H
Sbjct: 37 VTGASGYIASWLVKLLLHRGYTVRATVRDTADPKKTLH 150
Score = 26.3 bits (51), Expect(3) = 7e-026
Identities = 11/31 (35%), Positives = 12/31 (38%)
Frame = +3 / +1
Query: 150 RLSFFRCXXXXXXXXXXXXRGCSGVFHLASP 242
RL F+ GC VFH ASP
Sbjct: 178 RLHLFKASLLEEGTFDAAIAGCDCVFHTASP 270
>gb|BE602876.2|BE602876 HVSMEh0100H17f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0100H17f, mRNA sequence
Length = 505
Score = 63.8 bits (133), Expect(3) = 2e-025
Identities = 25/48 (52%), Positives = 30/48 (62%)
Frame = +3 / +1
Query: 342 VRRVVVTSSISAVVPNPGWPAGEVVDERCWTDIDYCEKNGVWYPASKT 485
V+RVV+ SS +AV NP WP G+V E W+D D C K WY SKT
Sbjct: 358 VKRVVIVSSCAAVFNNPNWPKGKVFTEDSWSDEDLCRKGEDWYLLSKT 501
Score = 57.9 bits (120), Expect(3) = 2e-025
Identities = 24/52 (46%), Positives = 35/52 (67%)
Frame = +3 / +1
Query: 210 GCSGVFHLASPCTVDPVKDPQNQLMVPAVEGTLNVVRAXKDAGGVRRVVVTS 365
GC GVFH+ASP +P+ +++ PAV GTLNV++A +A R V+V+S
Sbjct: 229 GCEGVFHVASPVPSGRSTNPEEEVIAPAVTGTLNVLKACNEAKVKRVVIVSS 384
Score = 30.9 bits (61), Expect(3) = 2e-025
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +3 / +1
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAETDH 116
VTGA GF+ S LV+ LL + + G + A+ H
Sbjct: 28 VTGAGGFVASWLVKLLLSKAHYTVRGTVRDPGNAKNAH 141
>gb|CA031581.1|CA031581 HX10G17r HX Hordeum vulgare subsp. vulgare cDNA clone HX10G17
5-PRIME, mRNA sequence
Length = 622
Score = 60.6 bits (126), Expect(3) = 6e-025
Identities = 22/43 (51%), Positives = 28/43 (65%)
Frame = +3 / +1
Query: 342 VRRVVVTSSISAVVPNPGWPAGEVVDERCWTDIDYCEKNGVWY 470
V+RVV+ SS++AV NP WP G+ DE W+D D C K WY
Sbjct: 490 VKRVVMVSSVAAVSNNPNWPKGKFFDEDSWSDEDLCRKGEDWY 618
Score = 56.1 bits (116), Expect(3) = 6e-025
Identities = 24/52 (46%), Positives = 35/52 (67%)
Frame = +3 / +1
Query: 210 GCSGVFHLASPCTVDPVKDPQNQLMVPAVEGTLNVVRAXKDAGGVRRVVVTS 365
GC GVFH+ASP +P+ +++ PAV GTLNV++A +A R V+V+S
Sbjct: 361 GCDGVFHVASPVPSGRSTNPEEEVIAPAVTGTLNVLKACYEAKVKRVVMVSS 516
Score = 34.1 bits (68), Expect(3) = 6e-025
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = +3 / +1
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAETDH 116
VTGA GFI S LV+ LL +G+ G + A+ H
Sbjct: 160 VTGAGGFIASWLVKLLLSKGHYTVRGTVRDPGNAKNAH 273
>gb|CA019777.1|CA019777 HV13C06r HV Hordeum vulgare subsp. vulgare cDNA clone HV13C06
5-PRIME, mRNA sequence
Length = 495
Score = 61.6 bits (128), Expect(3) = 2e-024
Identities = 20/35 (57%), Positives = 29/35 (82%)
Frame = +3 / +1
Query: 342 VRRVVVTSSISAVVPNPGWPAGEVVDERCWTDIDY 446
V+RVV+ SS++AV+ NP WP G+ +DE CW+D+DY
Sbjct: 391 VKRVVMVSSVAAVMTNPSWPEGKPMDEDCWSDVDY 495
Score = 56.5 bits (117), Expect(3) = 2e-024
Identities = 25/72 (34%), Positives = 38/72 (52%)
Frame = +3 / +1
Query: 150 RLSFFRCXXXXXXXXXXXXRGCSGVFHLASPCTVDPVKDPQNQLMVPAVEGTLNVVRAXK 329
RL F+ GC VFH+A P + + +P+ L+ PAV GT+NV++A
Sbjct: 202 RLRLFKADLLDYGSMAAAIAGCDVVFHVACPVLANHIPNPEADLIAPAVTGTMNVLKACS 381
Query: 330 DAGGVRRVVVTS 365
+A R V+V+S
Sbjct: 382 EAKVKRVVMVSS 417
Score = 30.9 bits (61), Expect(3) = 2e-024
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +3 / +1
Query: 3 VTGASGFIGSTLVRGLLGRG 62
VTGA GF+ S LV+ LL RG
Sbjct: 49 VTGAGGFVASWLVKLLLSRG 108
>gb|AV914608.1|AV914608 AV914608 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags7d04 5', mRNA sequence
Length = 514
Score = 59.3 bits (123), Expect(3) = 4e-024
Identities = 22/43 (51%), Positives = 27/43 (62%)
Frame = +3 / +2
Query: 342 VRRVVVTSSISAVVPNPGWPAGEVVDERCWTDIDYCEKNGVWY 470
V+RVV+ SS +AV NP WP G+V E W+D D C K WY
Sbjct: 380 VKRVVIVSSCAAVFNNPNWPKGKVFTEDSWSDEDLCRKGEDWY 508
Score = 57.9 bits (120), Expect(3) = 4e-024
Identities = 24/52 (46%), Positives = 35/52 (67%)
Frame = +3 / +2
Query: 210 GCSGVFHLASPCTVDPVKDPQNQLMVPAVEGTLNVVRAXKDAGGVRRVVVTS 365
GC GVFH+ASP +P+ +++ PAV GTLNV++A +A R V+V+S
Sbjct: 251 GCEGVFHVASPVPSGRSTNPEEEVIAPAVTGTLNVLKACNEAKVKRVVIVSS 406
Score = 30.9 bits (61), Expect(3) = 4e-024
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +3 / +2
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAETDH 116
VTGA GF+ S LV+ LL + + G + A+ H
Sbjct: 50 VTGAGGFVASWLVKLLLSKAHYTVRGTVRDPGNAKNAH 163
>gb|CA030259.1|CA030259 HX06I17r HX Hordeum vulgare subsp. vulgare cDNA clone HX06I17
5-PRIME, mRNA sequence
Length = 353
Score = 68.0 bits (142), Expect(2) = 4e-024
Identities = 28/38 (73%), Positives = 32/38 (84%)
Frame = +3 / +2
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDDRAETDH 116
VTGASGFIGS VR LL RGY+V A VL+PDD+AET+H
Sbjct: 80 VTGASGFIGSVTVRLLLARGYSVHAAVLNPDDKAETEH 193
Score = 61.6 bits (128), Expect(2) = 4e-024
Identities = 24/43 (55%), Positives = 26/43 (60%)
Frame = +3 / +2
Query: 150 RLSFFRCXXXXXXXXXXXXRGCSGVFHLASPCTVDPVKDPQNQ 278
R+ FF C RGCSGVFHLASPCTVD V DPQ +
Sbjct: 224 RVRFFPCDLLDGAAMLAAARGCSGVFHLASPCTVDRVLDPQKE 352
>gb|CA007077.1|CA007077 HU06K19r HU Hordeum vulgare subsp. vulgare cDNA clone HU06K19
5-PRIME, mRNA sequence
Length = 459
Score = 69.8 bits (146), Expect(2) = 2e-023
Identities = 28/55 (50%), Positives = 35/55 (63%)
Frame = +3 / +1
Query: 342 VRRVVVTSSISAVVPNPGWPAGEVVDERCWTDIDYCEKNGVWYPASKTLAEKAAW 506
V+RVV+ SS +AV NP WP G+V E W+D D C K WY SKT AE+ A+
Sbjct: 268 VKRVVIVSSCAAVFNNPNWPKGKVFTEDSWSDEDLCRKGEDWYLLSKTRAEREAF 432
Score = 57.9 bits (120), Expect(2) = 2e-023
Identities = 24/52 (46%), Positives = 35/52 (67%)
Frame = +3 / +1
Query: 210 GCSGVFHLASPCTVDPVKDPQNQLMVPAVEGTLNVVRAXKDAGGVRRVVVTS 365
GC GVFH+ASP +P+ +++ PAV GTLNV++A +A R V+V+S
Sbjct: 139 GCEGVFHVASPVPSGRSTNPEEEVIAPAVTGTLNVLKACNEAKVKRVVIVSS 294
>gb|BJ464456.1|BJ464456 BJ464456 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags34g17 5', mRNA sequence
Length = 647
Score = 69.8 bits (146), Expect(2) = 3e-023
Identities = 28/55 (50%), Positives = 35/55 (63%)
Frame = +3 / +2
Query: 342 VRRVVVTSSISAVVPNPGWPAGEVVDERCWTDIDYCEKNGVWYPASKTLAEKAAW 506
V+RVV+ SS +AV NP WP G+V E W+D D C K WY SKT AE+ A+
Sbjct: 209 VKRVVIVSSCAAVFNNPNWPKGKVFTEDSWSDEDLCRKGEDWYLLSKTRAEREAF 373
Score = 57.9 bits (120), Expect(2) = 3e-023
Identities = 24/52 (46%), Positives = 35/52 (67%)
Frame = +3 / +2
Query: 210 GCSGVFHLASPCTVDPVKDPQNQLMVPAVEGTLNVVRAXKDAGGVRRVVVTS 365
GC GVFH+ASP +P+ +++ PAV GTLNV++A +A R V+V+S
Sbjct: 80 GCEGVFHVASPVPSGRSTNPEEEVIAPAVTGTLNVLKACNEAKVKRVVIVSS 235
>gb|AV913390.1|AV913390 AV913390 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags21o04 5', mRNA sequence
Length = 518
Score = 69.8 bits (146), Expect(2) = 3e-023
Identities = 28/55 (50%), Positives = 35/55 (63%)
Frame = +3 / +2
Query: 342 VRRVVVTSSISAVVPNPGWPAGEVVDERCWTDIDYCEKNGVWYPASKTLAEKAAW 506
V+RVV+ SS +AV NP WP G+V E W+D D C K WY SKT AE+ A+
Sbjct: 329 VKRVVIVSSCAAVFNNPNWPKGKVFTEDSWSDEDLCRKGEDWYLLSKTRAEREAF 493
Score = 57.9 bits (120), Expect(2) = 3e-023
Identities = 24/52 (46%), Positives = 35/52 (67%)
Frame = +3 / +2
Query: 210 GCSGVFHLASPCTVDPVKDPQNQLMVPAVEGTLNVVRAXKDAGGVRRVVVTS 365
GC GVFH+ASP +P+ +++ PAV GTLNV++A +A R V+V+S
Sbjct: 200 GCEGVFHVASPVPSGRSTNPEEEVIAPAVTGTLNVLKACNEAKVKRVVIVSS 355
>gb|BU996119.1|BU996119 HM12I01r HM Hordeum vulgare subsp. vulgare cDNA clone HM12I01
5-PRIME, mRNA sequence
Length = 482
Score = 62.5 bits (130), Expect(4) = 3e-023
Identities = 23/52 (44%), Positives = 35/52 (67%)
Frame = +3 / +2
Query: 339 GVRRVVVTSSISAVVPNPGWPAGEVVDERCWTDIDYCEKNGVWYPASKTLAE 494
GVRRVV++S+I + NP +D+ CW+D+DYC++ WY +KT+AE
Sbjct: 326 GVRRVVLSSTIGTMYMNPHRDPDAPLDDSCWSDLDYCKQTKNWYCYAKTIAE 481
Score = 40.9 bits (83), Expect(4) = 3e-023
Identities = 19/32 (59%), Positives = 21/32 (65%)
Frame = +3 / +2
Query: 3 VTGASGFIGSTLVRGLLGRGYNVRAGVLDPDD 98
VTGA GFIGS +V+ LL RGY VR DD
Sbjct: 17 VTGAGGFIGSWIVKLLLARGYAVRGTSRRADD 112
Score = 32.7 bits (65), Expect(4) = 3e-023
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +3 / +2
Query: 246 TVDPVKDPQNQLMVPAVEGTLNVVRAXKDAGGVRRVV 356
T P+ D +++ P + GTLNVV AG R V+
Sbjct: 236 TASPMHDTPEEIIEPVITGTLNVVEMAAGAGVRRVVL 346
Score = 24.9 bits (48), Expect(4) = 3e-023
Identities = 10/31 (32%), Positives = 12/31 (38%)
Frame = +3 / +2
Query: 150 RLSFFRCXXXXXXXXXXXXRGCSGVFHLASP 242
RL+ + GC GV H ASP
Sbjct: 155 RLTMVQVDLLDRASLRAAFHGCDGVIHTASP 247
>gb|AV836450.1|AV836450 AV836450 K. Sato unpublished cDNA library: Hordeum vulgare subsp.
vulgare seedling leaves second leaf stage Hordeum
vulgare subsp. vulgare cDNA clone basd16h21, mRNA
sequence
Length = 566
Score = 90.4 bits (191), Expect(2) = 4e-023
Identities = 36/85 (42%), Positives = 51/85 (60%)
Frame = +3 / +1
Query: 210 GCSGVFHLASPCTVDPVKDPQNQLMVPAVEGTLNVVRAXKDAGGVRRVVVTSSISAVVPN 389
GC GVFH+ASP V DP+ +++ PA GT NV+ A A R VVV+S ++ +
Sbjct: 199 GCQGVFHVASPVPTGDVTDPEVEVLGPAATGTRNVLEAASAAKVRRLVVVSSIVAVDINP 378
Query: 390 PGWPAGEVVDERCWTDIDYCEKNGV 464
WPA ++ DE CW+D ++C N V
Sbjct: 379 KDWPADKIKDETCWSDREFCRNNEV 453
Score = 36.8 bits (74), Expect(2) = 4e-023
Identities = 17/28 (60%), Positives = 18/28 (64%)
Frame = +3 / +3
Query: 6 TGASGFIGSTLVRGLLGRGYNVRAGVLD 89
TGA G+I S LV LL RGY VR V D
Sbjct: 3 TGAGGYIASWLVXLLLSRGYTVRGTVRD 86
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 139,920,533
Number of Sequences: 312970
Number of extensions: 1675119
Number of successful extensions: 68610
Number of sequences better than 1.0e-020: 126
length of database: 58,378,179
effective HSP length: 50
effective length of database: 42,729,679
effective search space used: 5042102122
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)