TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2969865.2.1
(675 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AL506991.1|AL506991 AL506991 Hordeum vulgare Barke devel... 226 1e-058
gb|AL508664.1|AL508664 AL508664 Hordeum vulgare Barke devel... 226 1e-058
gb|BE195563.3|BE195563 HVSMEh0089G22f Hordeum vulgare 5-45 ... 226 1e-058
gb|BM376659.2|BM376659 EBem05_SQ002_N15_R embryo, 14 DPA, n... 226 1e-058
gb|BM375320.2|BM375320 EBem06_SQ002_P19_R embryo, 21 DPA, n... 226 1e-058
gb|BQ762752.1|BQ762752 EBro02_SQ006_A04_R root, 3 week, hyd... 226 1e-058
gb|BQ765714.1|BQ765714 EBro03_SQ007_P20_R root, 3 week, wat... 226 1e-058
gb|BU969574.1|BU969574 HB11O15r BC Hordeum vulgare subsp. v... 226 1e-058
gb|BU977818.1|BU977818 HA12B16r HA Hordeum vulgare subsp. v... 226 1e-058
gb|BU985319.1|BU985319 HF06M14r HF Hordeum vulgare subsp. v... 226 1e-058
gb|BU988898.1|BU988898 HF19B05r HF Hordeum vulgare subsp. v... 226 1e-058
gb|BU999178.1|BU999178 HI13I22r HI Hordeum vulgare subsp. v... 226 1e-058
gb|CA001732.1|CA001732 HS05G17r HS Hordeum vulgare subsp. v... 226 1e-058
gb|BQ761651.1|BQ761651 EBem10_SQ001_N07_R embryo, 2 Day ger... 224 3e-058
gb|CA018517.1|CA018517 HV08N19r HV Hordeum vulgare subsp. v... 217 4e-056
gb|CA029325.1|CA029325 HZ64N23r HZ Hordeum vulgare subsp. v... 217 4e-056
gb|CV056821.1|CV056821 BNEL21a1 Barley EST endosperm librar... 217 4e-056
gb|CV059292.1|CV059292 BNEL46e5 Barley EST endosperm librar... 217 4e-056
gb|AV928185.1|AV928185 AV928185 K. Sato unpublished cDNA li... 216 1e-055
gb|AV930242.1|AV930242 AV930242 K. Sato unpublished cDNA li... 216 1e-055
gb|AL510410.1|AL510410 AL510410 Hordeum vulgare Barke devel... 215 3e-055
gb|BQ466427.1|BQ466427 HT02I03r HT Hordeum vulgare subsp. v... 215 3e-055
gb|BE195373.2|BE195373 HVSMEh0089A22f Hordeum vulgare 5-45 ... 189 1e-052
gb|CA028862.1|CA028862 HZ63H11r HZ Hordeum vulgare subsp. v... 186 1e-046
gb|CA001262.1|CA001262 HS18J05u HS Hordeum vulgare subsp. v... 185 2e-046
gb|CA010137.1|CA010137 HT11K12u HT Hordeum vulgare subsp. v... 179 1e-044
gb|AL511843.1|AL511843 AL511843 Hordeum vulgare Barke devel... 177 4e-044
gb|CA014548.1|CA014548 HT11K12r HT Hordeum vulgare subsp. v... 137 1e-038
gb|CA004752.1|CA004752 HS18J05r HS Hordeum vulgare subsp. v... 146 1e-034
gb|BM374705.1|BM374705 EBma05_SQ002_I15_R maternal, 12 DPA,... 140 8e-033
gb|AV925110.1|AV925110 AV925110 K. Sato unpublished cDNA li... 127 4e-029
gb|BJ468792.1|BJ468792 BJ468792 K. Sato unpublished cDNA li... 123 1e-027
gb|CA025713.1|CA025713 HZ52P01r HZ Hordeum vulgare subsp. v... 123 1e-027
gb|BI951216.1|BI951216 HVSMEl0025B11f Hordeum vulgare spike... 114 4e-025
>gb|AL506991.1|AL506991 AL506991 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY04N11T 5',
mRNA sequence
Length = 622
Score = 226 bits (488), Expect = 1e-058
Identities = 95/99 (95%), Positives = 97/99 (97%)
Frame = +3 / +1
Query: 129 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 308
FSTGPLS+LM+SVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG
Sbjct: 139 FSTGPLSILMLSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 318
Query: 309 KKKALPVNKDRFISKMFLRGDSVIIVLRNPK*VACTRRE 425
KKKALPVNKDRFISKMFLRGDSVIIVLRNPK*V TRRE
Sbjct: 319 KKKALPVNKDRFISKMFLRGDSVIIVLRNPK*VWTTRRE 435
Score = 195 bits (421), Expect = 2e-049
Identities = 86/96 (89%), Positives = 86/96 (89%)
Frame = -3 / -3
Query: 424 SLRVQATHFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQ 245
S RV THFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQ
Sbjct: 434 SRRVVQTHFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQ 255
Query: 244 CRSKARTRPSNFLLFRQLIRTWVLFLTLIMSTERGP 137
RS A TRPSNFLLFRQLI TWVLFLTL M ERGP
Sbjct: 254 *RSNALTRPSNFLLFRQLISTWVLFLTLSMRMERGP 147
Score = 172 bits (370), Expect = 2e-042
Identities = 76/107 (71%), Positives = 85/107 (79%)
Frame = -2 / -2
Query: 404 SFRVPEDNDDRIPTEEHLAYEPVLVHRESLLLAFTGLRYLGPHLPNVLKNHVAVPIEGSH 225
SFRVPED+DDRIP EEHLAYEPVLVHRE LLLAFT L L PHLP+VL+NHVAV ++ H
Sbjct: 414 SFRVPEDDDDRIPAEEHLAYEPVLVHREGLLLAFTSLWNLSPHLPDVLENHVAVTVKCPH 235
Query: 224 ATKQLLVVPAVDKNLGIILDAHHEHRERTGAELLFLLFYVGFFRHGR 84
ATKQLLVVPAVDK+LG++LDA HE E AELL LL + RH R
Sbjct: 234 ATKQLLVVPAVDKHLGVVLDAEHEDGEGARAELLLLLLPLIDRRHLR 94
Score = 172 bits (370), Expect = 2e-042
Identities = 73/108 (67%), Positives = 82/108 (75%)
Frame = +2 / +3
Query: 83 GAHGGRNQHKKGGRGVQHRSSLGAHDERQE*YPGSYQLPEQQEVAWSRASLRSALQHGS* 262
G G ++GG GVQH L H +RQE +PG+YQLPEQQEVAWSR + +LQHGS
Sbjct: 93 GGGGACRSGEEGGGGVQHGPPLHPHAQRQEQHPGAYQLPEQQEVAWSREGI*PSLQHGSR 272
Query: 263 ER*GDVDRGTEDR*RQEEGSPGEQGQVHKQDVPPWGFGHHCPQEPEMS 406
ER GDVD G++D *RQEEG PGEQGQVHKQDVPP GFGHH PQEPEMS
Sbjct: 273 ERQGDVD*GSKDW*RQEEGPPGEQGQVHKQDVPPRGFGHHRPQEPEMS 416
Score = 128 bits (274), Expect = 3e-029
Identities = 61/93 (65%), Positives = 66/93 (70%)
Frame = -1 / -1
Query: 405 LISGS*GQ**PNPHGGTSCL*TCPCSPGEPSSCLYXXXXXXXXXXXXSQEPCCSADRRLA 226
LISGS*G+**PNP GGTSCL*TCPCSPG PSSCLY S+EPCCS + +
Sbjct: 415 LISGS*GR**PNPRGGTSCL*TCPCSPGGPSSCLYQSLEPQSTSP*RSREPCCSDGQMPS 236
Query: 225 RDQATSCCSGS**EPGYYS*RSS*APREDRC*T 127
RDQATSCCSGS** PG S*R +* R C*T
Sbjct: 235 RDQATSCCSGS**APGCCS*R*A*GWRGGPC*T 137
>gb|AL508664.1|AL508664 AL508664 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY09H01V 5',
mRNA sequence
Length = 594
Score = 226 bits (488), Expect = 1e-058
Identities = 95/99 (95%), Positives = 97/99 (97%)
Frame = +3 / +2
Query: 129 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 308
FSTGPLS+LM+SVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG
Sbjct: 152 FSTGPLSILMLSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 331
Query: 309 KKKALPVNKDRFISKMFLRGDSVIIVLRNPK*VACTRRE 425
KKKALPVNKDRFISKMFLRGDSVIIVLRNPK*V TRRE
Sbjct: 332 KKKALPVNKDRFISKMFLRGDSVIIVLRNPK*VWTTRRE 448
Score = 195 bits (421), Expect = 2e-049
Identities = 86/96 (89%), Positives = 86/96 (89%)
Frame = -3 / -1
Query: 424 SLRVQATHFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQ 245
S RV THFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQ
Sbjct: 447 SRRVVQTHFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQ 268
Query: 244 CRSKARTRPSNFLLFRQLIRTWVLFLTLIMSTERGP 137
RS A TRPSNFLLFRQLI TWVLFLTL M ERGP
Sbjct: 267 *RSNALTRPSNFLLFRQLISTWVLFLTLSMRMERGP 160
Score = 172 bits (370), Expect = 2e-042
Identities = 76/107 (71%), Positives = 85/107 (79%)
Frame = -2 / -3
Query: 404 SFRVPEDNDDRIPTEEHLAYEPVLVHRESLLLAFTGLRYLGPHLPNVLKNHVAVPIEGSH 225
SFRVPED+DDRIP EEHLAYEPVLVHRE LLLAFT L L PHLP+VL+NHVAV ++ H
Sbjct: 427 SFRVPEDDDDRIPAEEHLAYEPVLVHREGLLLAFTSLWNLSPHLPDVLENHVAVTVKCPH 248
Query: 224 ATKQLLVVPAVDKNLGIILDAHHEHRERTGAELLFLLFYVGFFRHGR 84
ATKQLLVVPAVDK+LG++LDA HE E AELL LL + RH R
Sbjct: 247 ATKQLLVVPAVDKHLGVVLDAEHEDGEGARAELLLLLLPLIDRRHLR 107
Score = 172 bits (370), Expect = 2e-042
Identities = 73/108 (67%), Positives = 82/108 (75%)
Frame = +2 / +1
Query: 83 GAHGGRNQHKKGGRGVQHRSSLGAHDERQE*YPGSYQLPEQQEVAWSRASLRSALQHGS* 262
G G ++GG GVQH L H +RQE +PG+YQLPEQQEVAWSR + +LQHGS
Sbjct: 106 GGGGACRSGEEGGGGVQHGPPLHPHAQRQEQHPGAYQLPEQQEVAWSREGI*PSLQHGSR 285
Query: 263 ER*GDVDRGTEDR*RQEEGSPGEQGQVHKQDVPPWGFGHHCPQEPEMS 406
ER GDVD G++D *RQEEG PGEQGQVHKQDVPP GFGHH PQEPEMS
Sbjct: 286 ERQGDVD*GSKDW*RQEEGPPGEQGQVHKQDVPPRGFGHHRPQEPEMS 429
Score = 128 bits (274), Expect = 3e-029
Identities = 61/93 (65%), Positives = 66/93 (70%)
Frame = -1 / -2
Query: 405 LISGS*GQ**PNPHGGTSCL*TCPCSPGEPSSCLYXXXXXXXXXXXXSQEPCCSADRRLA 226
LISGS*G+**PNP GGTSCL*TCPCSPG PSSCLY S+EPCCS + +
Sbjct: 428 LISGS*GR**PNPRGGTSCL*TCPCSPGGPSSCLYQSLEPQSTSP*RSREPCCSDGQMPS 249
Query: 225 RDQATSCCSGS**EPGYYS*RSS*APREDRC*T 127
RDQATSCCSGS** PG S*R +* R C*T
Sbjct: 248 RDQATSCCSGS**APGCCS*R*A*GWRGGPC*T 150
>gb|BE195563.3|BE195563 HVSMEh0089G22f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0089G22f, mRNA sequence
Length = 650
Score = 226 bits (488), Expect = 1e-058
Identities = 95/99 (95%), Positives = 97/99 (97%)
Frame = +3 / +2
Query: 129 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 308
FSTGPLS+LM+SVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG
Sbjct: 134 FSTGPLSILMLSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 313
Query: 309 KKKALPVNKDRFISKMFLRGDSVIIVLRNPK*VACTRRE 425
KKKALPVNKDRFISKMFLRGDSVIIVLRNPK*V TRRE
Sbjct: 314 KKKALPVNKDRFISKMFLRGDSVIIVLRNPK*VWTTRRE 430
Score = 195 bits (421), Expect = 2e-049
Identities = 86/96 (89%), Positives = 86/96 (89%)
Frame = -3 / -3
Query: 424 SLRVQATHFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQ 245
S RV THFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQ
Sbjct: 429 SRRVVQTHFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQ 250
Query: 244 CRSKARTRPSNFLLFRQLIRTWVLFLTLIMSTERGP 137
RS A TRPSNFLLFRQLI TWVLFLTL M ERGP
Sbjct: 249 *RSNALTRPSNFLLFRQLISTWVLFLTLSMRMERGP 142
Score = 172 bits (370), Expect = 2e-042
Identities = 76/107 (71%), Positives = 85/107 (79%)
Frame = -2 / -2
Query: 404 SFRVPEDNDDRIPTEEHLAYEPVLVHRESLLLAFTGLRYLGPHLPNVLKNHVAVPIEGSH 225
SFRVPED+DDRIP EEHLAYEPVLVHRE LLLAFT L L PHLP+VL+NHVAV ++ H
Sbjct: 409 SFRVPEDDDDRIPAEEHLAYEPVLVHREGLLLAFTSLWNLSPHLPDVLENHVAVTVKCPH 230
Query: 224 ATKQLLVVPAVDKNLGIILDAHHEHRERTGAELLFLLFYVGFFRHGR 84
ATKQLLVVPAVDK+LG++LDA HE E AELL LL + RH R
Sbjct: 229 ATKQLLVVPAVDKHLGVVLDAEHEDGEGARAELLLLLLPLIDRRHLR 89
Score = 172 bits (370), Expect = 2e-042
Identities = 73/108 (67%), Positives = 82/108 (75%)
Frame = +2 / +1
Query: 83 GAHGGRNQHKKGGRGVQHRSSLGAHDERQE*YPGSYQLPEQQEVAWSRASLRSALQHGS* 262
G G ++GG GVQH L H +RQE +PG+YQLPEQQEVAWSR + +LQHGS
Sbjct: 88 GGGGACRSGEEGGGGVQHGPPLHPHAQRQEQHPGAYQLPEQQEVAWSREGI*PSLQHGSR 267
Query: 263 ER*GDVDRGTEDR*RQEEGSPGEQGQVHKQDVPPWGFGHHCPQEPEMS 406
ER GDVD G++D *RQEEG PGEQGQVHKQDVPP GFGHH PQEPEMS
Sbjct: 268 ERQGDVD*GSKDW*RQEEGPPGEQGQVHKQDVPPRGFGHHRPQEPEMS 411
Score = 128 bits (274), Expect = 3e-029
Identities = 61/93 (65%), Positives = 66/93 (70%)
Frame = -1 / -1
Query: 405 LISGS*GQ**PNPHGGTSCL*TCPCSPGEPSSCLYXXXXXXXXXXXXSQEPCCSADRRLA 226
LISGS*G+**PNP GGTSCL*TCPCSPG PSSCLY S+EPCCS + +
Sbjct: 410 LISGS*GR**PNPRGGTSCL*TCPCSPGGPSSCLYQSLEPQSTSP*RSREPCCSDGQMPS 231
Query: 225 RDQATSCCSGS**EPGYYS*RSS*APREDRC*T 127
RDQATSCCSGS** PG S*R +* R C*T
Sbjct: 230 RDQATSCCSGS**APGCCS*R*A*GWRGGPC*T 132
>gb|BM376659.2|BM376659 EBem05_SQ002_N15_R embryo, 14 DPA, no treatment, cv Optic, EBem05
Hordeum vulgare subsp. vulgare cDNA clone
EBem05_SQ002_N15 5', mRNA sequence
Length = 529
Score = 226 bits (488), Expect = 1e-058
Identities = 95/99 (95%), Positives = 97/99 (97%)
Frame = +3 / +2
Query: 129 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 308
FSTGPLS+LM+SVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG
Sbjct: 140 FSTGPLSILMLSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 319
Query: 309 KKKALPVNKDRFISKMFLRGDSVIIVLRNPK*VACTRRE 425
KKKALPVNKDRFISKMFLRGDSVIIVLRNPK*V TRRE
Sbjct: 320 KKKALPVNKDRFISKMFLRGDSVIIVLRNPK*VWTTRRE 436
Score = 195 bits (421), Expect = 2e-049
Identities = 86/96 (89%), Positives = 86/96 (89%)
Frame = -3 / -2
Query: 424 SLRVQATHFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQ 245
S RV THFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQ
Sbjct: 435 SRRVVQTHFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQ 256
Query: 244 CRSKARTRPSNFLLFRQLIRTWVLFLTLIMSTERGP 137
RS A TRPSNFLLFRQLI TWVLFLTL M ERGP
Sbjct: 255 *RSNALTRPSNFLLFRQLISTWVLFLTLSMRMERGP 148
Score = 173 bits (372), Expect = 1e-042
Identities = 73/108 (67%), Positives = 83/108 (76%)
Frame = +2 / +1
Query: 83 GAHGGRNQHKKGGRGVQHRSSLGAHDERQE*YPGSYQLPEQQEVAWSRASLRSALQHGS* 262
G G ++GG GVQH + L H +RQE +PG+YQLPEQQEVAWSR + +LQHGS
Sbjct: 94 GGGGACRSGEEGGGGVQHGAPLHPHAQRQEQHPGAYQLPEQQEVAWSREGI*PSLQHGSR 273
Query: 263 ER*GDVDRGTEDR*RQEEGSPGEQGQVHKQDVPPWGFGHHCPQEPEMS 406
ER GDVD G++D *RQEEG PGEQGQVHKQDVPP GFGHH PQEPEMS
Sbjct: 274 ERQGDVD*GSKDW*RQEEGPPGEQGQVHKQDVPPRGFGHHRPQEPEMS 417
Score = 171 bits (369), Expect = 2e-042
Identities = 76/107 (71%), Positives = 85/107 (79%)
Frame = -2 / -1
Query: 404 SFRVPEDNDDRIPTEEHLAYEPVLVHRESLLLAFTGLRYLGPHLPNVLKNHVAVPIEGSH 225
SFRVPED+DDRIP EEHLAYEPVLVHRE LLLAFT L L PHLP+VL+NHVAV ++ H
Sbjct: 415 SFRVPEDDDDRIPAEEHLAYEPVLVHREGLLLAFTSLWNLSPHLPDVLENHVAVTVKCPH 236
Query: 224 ATKQLLVVPAVDKNLGIILDAHHEHRERTGAELLFLLFYVGFFRHGR 84
ATKQLLVVPAVDK+LG++LDA HE E AELL LL + RH R
Sbjct: 235 ATKQLLVVPAVDKHLGVVLDAEHEDGEGPRAELLLLLLPLIDRRHLR 95
Score = 127 bits (273), Expect = 4e-029
Identities = 61/93 (65%), Positives = 66/93 (70%)
Frame = -1 / -3
Query: 405 LISGS*GQ**PNPHGGTSCL*TCPCSPGEPSSCLYXXXXXXXXXXXXSQEPCCSADRRLA 226
LISGS*G+**PNP GGTSCL*TCPCSPG PSSCLY S+EPCCS + +
Sbjct: 416 LISGS*GR**PNPRGGTSCL*TCPCSPGGPSSCLYQSLEPQSTSP*RSREPCCSDGQMPS 237
Query: 225 RDQATSCCSGS**EPGYYS*RSS*APREDRC*T 127
RDQATSCCSGS** PG S*R +* R C*T
Sbjct: 236 RDQATSCCSGS**APGCCS*R*A*GWRGAPC*T 138
>gb|BM375320.2|BM375320 EBem06_SQ002_P19_R embryo, 21 DPA, no treatment, cv Optic, EBem06
Hordeum vulgare subsp. vulgare cDNA clone
EBem06_SQ002_P19 5', mRNA sequence
Length = 465
Score = 226 bits (488), Expect = 1e-058
Identities = 95/99 (95%), Positives = 97/99 (97%)
Frame = +3 / +2
Query: 129 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 308
FSTGPLS+LM+SVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG
Sbjct: 167 FSTGPLSILMLSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 346
Query: 309 KKKALPVNKDRFISKMFLRGDSVIIVLRNPK*VACTRRE 425
KKKALPVNKDRFISKMFLRGDSVIIVLRNPK*V TRRE
Sbjct: 347 KKKALPVNKDRFISKMFLRGDSVIIVLRNPK*VWTTRRE 463
Score = 195 bits (421), Expect = 2e-049
Identities = 86/96 (89%), Positives = 86/96 (89%)
Frame = -3 / -1
Query: 424 SLRVQATHFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQ 245
S RV THFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQ
Sbjct: 462 SRRVVQTHFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQ 283
Query: 244 CRSKARTRPSNFLLFRQLIRTWVLFLTLIMSTERGP 137
RS A TRPSNFLLFRQLI TWVLFLTL M ERGP
Sbjct: 282 *RSNALTRPSNFLLFRQLISTWVLFLTLSMRMERGP 175
Score = 173 bits (372), Expect = 1e-042
Identities = 73/108 (67%), Positives = 83/108 (76%)
Frame = +2 / +1
Query: 83 GAHGGRNQHKKGGRGVQHRSSLGAHDERQE*YPGSYQLPEQQEVAWSRASLRSALQHGS* 262
G G ++GG GVQH + L H +RQE +PG+YQLPEQQEVAWSR + +LQHGS
Sbjct: 121 GGGGACRSGEEGGGGVQHGAPLHPHAQRQEQHPGAYQLPEQQEVAWSREGI*PSLQHGSR 300
Query: 263 ER*GDVDRGTEDR*RQEEGSPGEQGQVHKQDVPPWGFGHHCPQEPEMS 406
ER GDVD G++D *RQEEG PGEQGQVHKQDVPP GFGHH PQEPEMS
Sbjct: 301 ERQGDVD*GSKDW*RQEEGPPGEQGQVHKQDVPPRGFGHHRPQEPEMS 444
Score = 171 bits (369), Expect = 2e-042
Identities = 76/107 (71%), Positives = 85/107 (79%)
Frame = -2 / -3
Query: 404 SFRVPEDNDDRIPTEEHLAYEPVLVHRESLLLAFTGLRYLGPHLPNVLKNHVAVPIEGSH 225
SFRVPED+DDRIP EEHLAYEPVLVHRE LLLAFT L L PHLP+VL+NHVAV ++ H
Sbjct: 442 SFRVPEDDDDRIPAEEHLAYEPVLVHREGLLLAFTSLWNLSPHLPDVLENHVAVTVKCPH 263
Query: 224 ATKQLLVVPAVDKNLGIILDAHHEHRERTGAELLFLLFYVGFFRHGR 84
ATKQLLVVPAVDK+LG++LDA HE E AELL LL + RH R
Sbjct: 262 ATKQLLVVPAVDKHLGVVLDAEHEDGEGPRAELLLLLLPLIDRRHLR 122
Score = 127 bits (273), Expect = 4e-029
Identities = 61/93 (65%), Positives = 66/93 (70%)
Frame = -1 / -2
Query: 405 LISGS*GQ**PNPHGGTSCL*TCPCSPGEPSSCLYXXXXXXXXXXXXSQEPCCSADRRLA 226
LISGS*G+**PNP GGTSCL*TCPCSPG PSSCLY S+EPCCS + +
Sbjct: 443 LISGS*GR**PNPRGGTSCL*TCPCSPGGPSSCLYQSLEPQSTSP*RSREPCCSDGQMPS 264
Query: 225 RDQATSCCSGS**EPGYYS*RSS*APREDRC*T 127
RDQATSCCSGS** PG S*R +* R C*T
Sbjct: 263 RDQATSCCSGS**APGCCS*R*A*GWRGAPC*T 165
>gb|BQ762752.1|BQ762752 EBro02_SQ006_A04_R root, 3 week, hydroponic grown, low nitrogen, cv
Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone
EBro02_SQ006_A04 5', mRNA sequence
Length = 636
Score = 226 bits (488), Expect = 1e-058
Identities = 95/99 (95%), Positives = 97/99 (97%)
Frame = +3 / +2
Query: 129 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 308
FSTGPLS+LM+SVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG
Sbjct: 137 FSTGPLSILMLSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 316
Query: 309 KKKALPVNKDRFISKMFLRGDSVIIVLRNPK*VACTRRE 425
KKKALPVNKDRFISKMFLRGDSVIIVLRNPK*V TRRE
Sbjct: 317 KKKALPVNKDRFISKMFLRGDSVIIVLRNPK*VWTTRRE 433
Score = 195 bits (421), Expect = 2e-049
Identities = 86/96 (89%), Positives = 86/96 (89%)
Frame = -3 / -1
Query: 424 SLRVQATHFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQ 245
S RV THFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQ
Sbjct: 432 SRRVVQTHFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQ 253
Query: 244 CRSKARTRPSNFLLFRQLIRTWVLFLTLIMSTERGP 137
RS A TRPSNFLLFRQLI TWVLFLTL M ERGP
Sbjct: 252 *RSNALTRPSNFLLFRQLISTWVLFLTLSMRMERGP 145
Score = 173 bits (372), Expect = 1e-042
Identities = 73/108 (67%), Positives = 83/108 (76%)
Frame = +2 / +1
Query: 83 GAHGGRNQHKKGGRGVQHRSSLGAHDERQE*YPGSYQLPEQQEVAWSRASLRSALQHGS* 262
G G ++GG GVQH + L H +RQE +PG+YQLPEQQEVAWSR + +LQHGS
Sbjct: 91 GGGGACRSGEEGGGGVQHGAPLHPHAQRQEQHPGAYQLPEQQEVAWSREGI*PSLQHGSR 270
Query: 263 ER*GDVDRGTEDR*RQEEGSPGEQGQVHKQDVPPWGFGHHCPQEPEMS 406
ER GDVD G++D *RQEEG PGEQGQVHKQDVPP GFGHH PQEPEMS
Sbjct: 271 ERQGDVD*GSKDW*RQEEGPPGEQGQVHKQDVPPRGFGHHRPQEPEMS 414
Score = 171 bits (369), Expect = 2e-042
Identities = 76/107 (71%), Positives = 85/107 (79%)
Frame = -2 / -3
Query: 404 SFRVPEDNDDRIPTEEHLAYEPVLVHRESLLLAFTGLRYLGPHLPNVLKNHVAVPIEGSH 225
SFRVPED+DDRIP EEHLAYEPVLVHRE LLLAFT L L PHLP+VL+NHVAV ++ H
Sbjct: 412 SFRVPEDDDDRIPAEEHLAYEPVLVHREGLLLAFTSLWNLSPHLPDVLENHVAVTVKCPH 233
Query: 224 ATKQLLVVPAVDKNLGIILDAHHEHRERTGAELLFLLFYVGFFRHGR 84
ATKQLLVVPAVDK+LG++LDA HE E AELL LL + RH R
Sbjct: 232 ATKQLLVVPAVDKHLGVVLDAEHEDGEGPRAELLLLLLPLIDRRHLR 92
Score = 127 bits (273), Expect = 4e-029
Identities = 61/93 (65%), Positives = 66/93 (70%)
Frame = -1 / -2
Query: 405 LISGS*GQ**PNPHGGTSCL*TCPCSPGEPSSCLYXXXXXXXXXXXXSQEPCCSADRRLA 226
LISGS*G+**PNP GGTSCL*TCPCSPG PSSCLY S+EPCCS + +
Sbjct: 413 LISGS*GR**PNPRGGTSCL*TCPCSPGGPSSCLYQSLEPQSTSP*RSREPCCSDGQMPS 234
Query: 225 RDQATSCCSGS**EPGYYS*RSS*APREDRC*T 127
RDQATSCCSGS** PG S*R +* R C*T
Sbjct: 233 RDQATSCCSGS**APGCCS*R*A*GWRGAPC*T 135
>gb|BQ765714.1|BQ765714 EBro03_SQ007_P20_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ007_P20 5', mRNA sequence
Length = 524
Score = 226 bits (488), Expect = 1e-058
Identities = 95/99 (95%), Positives = 97/99 (97%)
Frame = +3 / +2
Query: 129 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 308
FSTGPLS+LM+SVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG
Sbjct: 137 FSTGPLSILMLSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 316
Query: 309 KKKALPVNKDRFISKMFLRGDSVIIVLRNPK*VACTRRE 425
KKKALPVNKDRFISKMFLRGDSVIIVLRNPK*V TRRE
Sbjct: 317 KKKALPVNKDRFISKMFLRGDSVIIVLRNPK*VWTTRRE 433
Score = 195 bits (421), Expect = 2e-049
Identities = 86/96 (89%), Positives = 86/96 (89%)
Frame = -3 / -3
Query: 424 SLRVQATHFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQ 245
S RV THFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQ
Sbjct: 432 SRRVVQTHFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQ 253
Query: 244 CRSKARTRPSNFLLFRQLIRTWVLFLTLIMSTERGP 137
RS A TRPSNFLLFRQLI TWVLFLTL M ERGP
Sbjct: 252 *RSNALTRPSNFLLFRQLISTWVLFLTLSMRMERGP 145
Score = 170 bits (366), Expect = 6e-042
Identities = 72/108 (66%), Positives = 82/108 (75%)
Frame = +2 / +1
Query: 83 GAHGGRNQHKKGGRGVQHRSSLGAHDERQE*YPGSYQLPEQQEVAWSRASLRSALQHGS* 262
G G ++GG GVQH + L H +RQE +PG+YQLPEQQEVAWSR + +LQHGS
Sbjct: 91 GGGGACRSGEEGGGGVQHGAPLHPHAQRQEQHPGAYQLPEQQEVAWSREGI*PSLQHGSR 270
Query: 263 ER*GDVDRGTEDR*RQEEGSPGEQGQVHKQDVPPWGFGHHCPQEPEMS 406
ER GDVD G++D *RQEE PGEQGQVHKQDVPP GFGHH PQEPEMS
Sbjct: 271 ERQGDVD*GSKDW*RQEESPPGEQGQVHKQDVPPRGFGHHRPQEPEMS 414
Score = 170 bits (365), Expect = 9e-042
Identities = 75/107 (70%), Positives = 84/107 (78%)
Frame = -2 / -2
Query: 404 SFRVPEDNDDRIPTEEHLAYEPVLVHRESLLLAFTGLRYLGPHLPNVLKNHVAVPIEGSH 225
SFRVPED+DDRIP EEHLAYEPVLVHRE LLAFT L L PHLP+VL+NHVAV ++ H
Sbjct: 412 SFRVPEDDDDRIPAEEHLAYEPVLVHREGFLLAFTSLWNLSPHLPDVLENHVAVTVKCPH 233
Query: 224 ATKQLLVVPAVDKNLGIILDAHHEHRERTGAELLFLLFYVGFFRHGR 84
ATKQLLVVPAVDK+LG++LDA HE E AELL LL + RH R
Sbjct: 232 ATKQLLVVPAVDKHLGVVLDAEHEDGEGPRAELLLLLLPLIDRRHLR 92
Score = 123 bits (263), Expect = 1e-027
Identities = 60/93 (64%), Positives = 65/93 (69%)
Frame = -1 / -1
Query: 405 LISGS*GQ**PNPHGGTSCL*TCPCSPGEPSSCLYXXXXXXXXXXXXSQEPCCSADRRLA 226
LISGS*G+**PNP GGTSCL*TCPCSPG SSCLY S+EPCCS + +
Sbjct: 413 LISGS*GR**PNPRGGTSCL*TCPCSPGGLSSCLYQSLEPQSTSP*RSREPCCSDGQMPS 234
Query: 225 RDQATSCCSGS**EPGYYS*RSS*APREDRC*T 127
RDQATSCCSGS** PG S*R +* R C*T
Sbjct: 233 RDQATSCCSGS**APGCCS*R*A*GWRGAPC*T 135
>gb|BU969574.1|BU969574 HB11O15r BC Hordeum vulgare subsp. vulgare cDNA clone HB11O15
5-PRIME, mRNA sequence
Length = 476
Score = 226 bits (488), Expect = 1e-058
Identities = 95/99 (95%), Positives = 97/99 (97%)
Frame = +3 / +3
Query: 129 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 308
FSTGPLS+LM+SVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG
Sbjct: 123 FSTGPLSILMLSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 302
Query: 309 KKKALPVNKDRFISKMFLRGDSVIIVLRNPK*VACTRRE 425
KKKALPVNKDRFISKMFLRGDSVIIVLRNPK*V TRRE
Sbjct: 303 KKKALPVNKDRFISKMFLRGDSVIIVLRNPK*VWTTRRE 419
Score = 195 bits (421), Expect = 2e-049
Identities = 86/96 (89%), Positives = 86/96 (89%)
Frame = -3 / -2
Query: 424 SLRVQATHFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQ 245
S RV THFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQ
Sbjct: 418 SRRVVQTHFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQ 239
Query: 244 CRSKARTRPSNFLLFRQLIRTWVLFLTLIMSTERGP 137
RS A TRPSNFLLFRQLI TWVLFLTL M ERGP
Sbjct: 238 *RSNALTRPSNFLLFRQLISTWVLFLTLSMRMERGP 131
Score = 172 bits (370), Expect = 2e-042
Identities = 76/107 (71%), Positives = 85/107 (79%)
Frame = -2 / -1
Query: 404 SFRVPEDNDDRIPTEEHLAYEPVLVHRESLLLAFTGLRYLGPHLPNVLKNHVAVPIEGSH 225
SFRVPED+DDRIP EEHLAYEPVLVHRE LLLAFT L L PHLP+VL+NHVAV ++ H
Sbjct: 398 SFRVPEDDDDRIPAEEHLAYEPVLVHREGLLLAFTSLWNLSPHLPDVLENHVAVTVKCPH 219
Query: 224 ATKQLLVVPAVDKNLGIILDAHHEHRERTGAELLFLLFYVGFFRHGR 84
ATKQLLVVPAVDK+LG++LDA HE E AELL LL + RH R
Sbjct: 218 ATKQLLVVPAVDKHLGVVLDAEHEDGEGARAELLLLLLPLIDRRHLR 78
Score = 172 bits (370), Expect = 2e-042
Identities = 73/108 (67%), Positives = 82/108 (75%)
Frame = +2 / +2
Query: 83 GAHGGRNQHKKGGRGVQHRSSLGAHDERQE*YPGSYQLPEQQEVAWSRASLRSALQHGS* 262
G G ++GG GVQH L H +RQE +PG+YQLPEQQEVAWSR + +LQHGS
Sbjct: 77 GGGGACRSGEEGGGGVQHGPPLHPHAQRQEQHPGAYQLPEQQEVAWSREGI*PSLQHGSR 256
Query: 263 ER*GDVDRGTEDR*RQEEGSPGEQGQVHKQDVPPWGFGHHCPQEPEMS 406
ER GDVD G++D *RQEEG PGEQGQVHKQDVPP GFGHH PQEPEMS
Sbjct: 257 ERQGDVD*GSKDW*RQEEGPPGEQGQVHKQDVPPRGFGHHRPQEPEMS 400
Score = 128 bits (274), Expect = 3e-029
Identities = 61/93 (65%), Positives = 66/93 (70%)
Frame = -1 / -3
Query: 405 LISGS*GQ**PNPHGGTSCL*TCPCSPGEPSSCLYXXXXXXXXXXXXSQEPCCSADRRLA 226
LISGS*G+**PNP GGTSCL*TCPCSPG PSSCLY S+EPCCS + +
Sbjct: 399 LISGS*GR**PNPRGGTSCL*TCPCSPGGPSSCLYQSLEPQSTSP*RSREPCCSDGQMPS 220
Query: 225 RDQATSCCSGS**EPGYYS*RSS*APREDRC*T 127
RDQATSCCSGS** PG S*R +* R C*T
Sbjct: 219 RDQATSCCSGS**APGCCS*R*A*GWRGGPC*T 121
>gb|BU977818.1|BU977818 HA12B16r HA Hordeum vulgare subsp. vulgare cDNA clone HA12B16
5-PRIME, mRNA sequence
Length = 535
Score = 226 bits (488), Expect = 1e-058
Identities = 95/99 (95%), Positives = 97/99 (97%)
Frame = +3 / +3
Query: 129 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 308
FSTGPLS+LM+SVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG
Sbjct: 147 FSTGPLSILMLSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 326
Query: 309 KKKALPVNKDRFISKMFLRGDSVIIVLRNPK*VACTRRE 425
KKKALPVNKDRFISKMFLRGDSVIIVLRNPK*V TRRE
Sbjct: 327 KKKALPVNKDRFISKMFLRGDSVIIVLRNPK*VWTTRRE 443
Score = 195 bits (421), Expect = 2e-049
Identities = 86/96 (89%), Positives = 86/96 (89%)
Frame = -3 / -1
Query: 424 SLRVQATHFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQ 245
S RV THFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQ
Sbjct: 442 SRRVVQTHFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQ 263
Query: 244 CRSKARTRPSNFLLFRQLIRTWVLFLTLIMSTERGP 137
RS A TRPSNFLLFRQLI TWVLFLTL M ERGP
Sbjct: 262 *RSNALTRPSNFLLFRQLISTWVLFLTLSMRMERGP 155
Score = 172 bits (370), Expect = 2e-042
Identities = 76/107 (71%), Positives = 85/107 (79%)
Frame = -2 / -3
Query: 404 SFRVPEDNDDRIPTEEHLAYEPVLVHRESLLLAFTGLRYLGPHLPNVLKNHVAVPIEGSH 225
SFRVPED+DDRIP EEHLAYEPVLVHRE LLLAFT L L PHLP+VL+NHVAV ++ H
Sbjct: 422 SFRVPEDDDDRIPAEEHLAYEPVLVHREGLLLAFTSLWNLSPHLPDVLENHVAVTVKCPH 243
Query: 224 ATKQLLVVPAVDKNLGIILDAHHEHRERTGAELLFLLFYVGFFRHGR 84
ATKQLLVVPAVDK+LG++LDA HE E AELL LL + RH R
Sbjct: 242 ATKQLLVVPAVDKHLGVVLDAEHEDGEGARAELLLLLLPLIDRRHLR 102
Score = 172 bits (370), Expect = 2e-042
Identities = 73/108 (67%), Positives = 82/108 (75%)
Frame = +2 / +2
Query: 83 GAHGGRNQHKKGGRGVQHRSSLGAHDERQE*YPGSYQLPEQQEVAWSRASLRSALQHGS* 262
G G ++GG GVQH L H +RQE +PG+YQLPEQQEVAWSR + +LQHGS
Sbjct: 101 GGGGACRSGEEGGGGVQHGPPLHPHAQRQEQHPGAYQLPEQQEVAWSREGI*PSLQHGSR 280
Query: 263 ER*GDVDRGTEDR*RQEEGSPGEQGQVHKQDVPPWGFGHHCPQEPEMS 406
ER GDVD G++D *RQEEG PGEQGQVHKQDVPP GFGHH PQEPEMS
Sbjct: 281 ERQGDVD*GSKDW*RQEEGPPGEQGQVHKQDVPPRGFGHHRPQEPEMS 424
Score = 128 bits (274), Expect = 3e-029
Identities = 61/93 (65%), Positives = 66/93 (70%)
Frame = -1 / -2
Query: 405 LISGS*GQ**PNPHGGTSCL*TCPCSPGEPSSCLYXXXXXXXXXXXXSQEPCCSADRRLA 226
LISGS*G+**PNP GGTSCL*TCPCSPG PSSCLY S+EPCCS + +
Sbjct: 423 LISGS*GR**PNPRGGTSCL*TCPCSPGGPSSCLYQSLEPQSTSP*RSREPCCSDGQMPS 244
Query: 225 RDQATSCCSGS**EPGYYS*RSS*APREDRC*T 127
RDQATSCCSGS** PG S*R +* R C*T
Sbjct: 243 RDQATSCCSGS**APGCCS*R*A*GWRGGPC*T 145
>gb|BU985319.1|BU985319 HF06M14r HF Hordeum vulgare subsp. vulgare cDNA clone HF06M14
5-PRIME, mRNA sequence
Length = 572
Score = 226 bits (488), Expect = 1e-058
Identities = 95/99 (95%), Positives = 97/99 (97%)
Frame = +3 / +1
Query: 129 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 308
FSTGPLS+LM+SVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG
Sbjct: 82 FSTGPLSILMLSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 261
Query: 309 KKKALPVNKDRFISKMFLRGDSVIIVLRNPK*VACTRRE 425
KKKALPVNKDRFISKMFLRGDSVIIVLRNPK*V TRRE
Sbjct: 262 KKKALPVNKDRFISKMFLRGDSVIIVLRNPK*VWTTRRE 378
Score = 195 bits (421), Expect = 2e-049
Identities = 86/96 (89%), Positives = 86/96 (89%)
Frame = -3 / -1
Query: 424 SLRVQATHFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQ 245
S RV THFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQ
Sbjct: 377 SRRVVQTHFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQ 198
Query: 244 CRSKARTRPSNFLLFRQLIRTWVLFLTLIMSTERGP 137
RS A TRPSNFLLFRQLI TWVLFLTL M ERGP
Sbjct: 197 *RSNALTRPSNFLLFRQLISTWVLFLTLSMRMERGP 90
Score = 172 bits (370), Expect = 2e-042
Identities = 76/107 (71%), Positives = 85/107 (79%)
Frame = -2 / -3
Query: 404 SFRVPEDNDDRIPTEEHLAYEPVLVHRESLLLAFTGLRYLGPHLPNVLKNHVAVPIEGSH 225
SFRVPED+DDRIP EEHLAYEPVLVHRE LLLAFT L L PHLP+VL+NHVAV ++ H
Sbjct: 357 SFRVPEDDDDRIPAEEHLAYEPVLVHREGLLLAFTSLWNLSPHLPDVLENHVAVTVKCPH 178
Query: 224 ATKQLLVVPAVDKNLGIILDAHHEHRERTGAELLFLLFYVGFFRHGR 84
ATKQLLVVPAVDK+LG++LDA HE E AELL LL + RH R
Sbjct: 177 ATKQLLVVPAVDKHLGVVLDAEHEDGEGARAELLLLLLPLIDRRHLR 37
Score = 172 bits (370), Expect = 2e-042
Identities = 73/108 (67%), Positives = 82/108 (75%)
Frame = +2 / +3
Query: 83 GAHGGRNQHKKGGRGVQHRSSLGAHDERQE*YPGSYQLPEQQEVAWSRASLRSALQHGS* 262
G G ++GG GVQH L H +RQE +PG+YQLPEQQEVAWSR + +LQHGS
Sbjct: 36 GGGGACRSGEEGGGGVQHGPPLHPHAQRQEQHPGAYQLPEQQEVAWSREGI*PSLQHGSR 215
Query: 263 ER*GDVDRGTEDR*RQEEGSPGEQGQVHKQDVPPWGFGHHCPQEPEMS 406
ER GDVD G++D *RQEEG PGEQGQVHKQDVPP GFGHH PQEPEMS
Sbjct: 216 ERQGDVD*GSKDW*RQEEGPPGEQGQVHKQDVPPRGFGHHRPQEPEMS 359
Score = 128 bits (274), Expect = 3e-029
Identities = 61/93 (65%), Positives = 66/93 (70%)
Frame = -1 / -2
Query: 405 LISGS*GQ**PNPHGGTSCL*TCPCSPGEPSSCLYXXXXXXXXXXXXSQEPCCSADRRLA 226
LISGS*G+**PNP GGTSCL*TCPCSPG PSSCLY S+EPCCS + +
Sbjct: 358 LISGS*GR**PNPRGGTSCL*TCPCSPGGPSSCLYQSLEPQSTSP*RSREPCCSDGQMPS 179
Query: 225 RDQATSCCSGS**EPGYYS*RSS*APREDRC*T 127
RDQATSCCSGS** PG S*R +* R C*T
Sbjct: 178 RDQATSCCSGS**APGCCS*R*A*GWRGGPC*T 80
>gb|BU988898.1|BU988898 HF19B05r HF Hordeum vulgare subsp. vulgare cDNA clone HF19B05
5-PRIME, mRNA sequence
Length = 585
Score = 226 bits (488), Expect = 1e-058
Identities = 95/99 (95%), Positives = 97/99 (97%)
Frame = +3 / +1
Query: 129 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 308
FSTGPLS+LM+SVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG
Sbjct: 109 FSTGPLSILMLSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 288
Query: 309 KKKALPVNKDRFISKMFLRGDSVIIVLRNPK*VACTRRE 425
KKKALPVNKDRFISKMFLRGDSVIIVLRNPK*V TRRE
Sbjct: 289 KKKALPVNKDRFISKMFLRGDSVIIVLRNPK*VWTTRRE 405
Score = 195 bits (421), Expect = 2e-049
Identities = 86/96 (89%), Positives = 86/96 (89%)
Frame = -3 / -2
Query: 424 SLRVQATHFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQ 245
S RV THFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQ
Sbjct: 404 SRRVVQTHFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQ 225
Query: 244 CRSKARTRPSNFLLFRQLIRTWVLFLTLIMSTERGP 137
RS A TRPSNFLLFRQLI TWVLFLTL M ERGP
Sbjct: 224 *RSNALTRPSNFLLFRQLISTWVLFLTLSMRMERGP 117
Score = 172 bits (370), Expect = 2e-042
Identities = 76/107 (71%), Positives = 85/107 (79%)
Frame = -2 / -1
Query: 404 SFRVPEDNDDRIPTEEHLAYEPVLVHRESLLLAFTGLRYLGPHLPNVLKNHVAVPIEGSH 225
SFRVPED+DDRIP EEHLAYEPVLVHRE LLLAFT L L PHLP+VL+NHVAV ++ H
Sbjct: 384 SFRVPEDDDDRIPAEEHLAYEPVLVHREGLLLAFTSLWNLSPHLPDVLENHVAVTVKCPH 205
Query: 224 ATKQLLVVPAVDKNLGIILDAHHEHRERTGAELLFLLFYVGFFRHGR 84
ATKQLLVVPAVDK+LG++LDA HE E AELL LL + RH R
Sbjct: 204 ATKQLLVVPAVDKHLGVVLDAEHEDGEGARAELLLLLLPLIDRRHLR 64
Score = 172 bits (370), Expect = 2e-042
Identities = 73/108 (67%), Positives = 82/108 (75%)
Frame = +2 / +3
Query: 83 GAHGGRNQHKKGGRGVQHRSSLGAHDERQE*YPGSYQLPEQQEVAWSRASLRSALQHGS* 262
G G ++GG GVQH L H +RQE +PG+YQLPEQQEVAWSR + +LQHGS
Sbjct: 63 GGGGACRSGEEGGGGVQHGPPLHPHAQRQEQHPGAYQLPEQQEVAWSREGI*PSLQHGSR 242
Query: 263 ER*GDVDRGTEDR*RQEEGSPGEQGQVHKQDVPPWGFGHHCPQEPEMS 406
ER GDVD G++D *RQEEG PGEQGQVHKQDVPP GFGHH PQEPEMS
Sbjct: 243 ERQGDVD*GSKDW*RQEEGPPGEQGQVHKQDVPPRGFGHHRPQEPEMS 386
Score = 128 bits (274), Expect = 3e-029
Identities = 61/93 (65%), Positives = 66/93 (70%)
Frame = -1 / -3
Query: 405 LISGS*GQ**PNPHGGTSCL*TCPCSPGEPSSCLYXXXXXXXXXXXXSQEPCCSADRRLA 226
LISGS*G+**PNP GGTSCL*TCPCSPG PSSCLY S+EPCCS + +
Sbjct: 385 LISGS*GR**PNPRGGTSCL*TCPCSPGGPSSCLYQSLEPQSTSP*RSREPCCSDGQMPS 206
Query: 225 RDQATSCCSGS**EPGYYS*RSS*APREDRC*T 127
RDQATSCCSGS** PG S*R +* R C*T
Sbjct: 205 RDQATSCCSGS**APGCCS*R*A*GWRGGPC*T 107
>gb|BU999178.1|BU999178 HI13I22r HI Hordeum vulgare subsp. vulgare cDNA clone HI13I22
5-PRIME, mRNA sequence
Length = 634
Score = 226 bits (488), Expect = 1e-058
Identities = 95/99 (95%), Positives = 97/99 (97%)
Frame = +3 / +2
Query: 129 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 308
FSTGPLS+LM+SVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG
Sbjct: 140 FSTGPLSILMLSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 319
Query: 309 KKKALPVNKDRFISKMFLRGDSVIIVLRNPK*VACTRRE 425
KKKALPVNKDRFISKMFLRGDSVIIVLRNPK*V TRRE
Sbjct: 320 KKKALPVNKDRFISKMFLRGDSVIIVLRNPK*VWTTRRE 436
Score = 195 bits (421), Expect = 2e-049
Identities = 86/96 (89%), Positives = 86/96 (89%)
Frame = -3 / -2
Query: 424 SLRVQATHFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQ 245
S RV THFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQ
Sbjct: 435 SRRVVQTHFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQ 256
Query: 244 CRSKARTRPSNFLLFRQLIRTWVLFLTLIMSTERGP 137
RS A TRPSNFLLFRQLI TWVLFLTL M ERGP
Sbjct: 255 *RSNALTRPSNFLLFRQLISTWVLFLTLSMRMERGP 148
Score = 172 bits (370), Expect = 2e-042
Identities = 76/107 (71%), Positives = 85/107 (79%)
Frame = -2 / -1
Query: 404 SFRVPEDNDDRIPTEEHLAYEPVLVHRESLLLAFTGLRYLGPHLPNVLKNHVAVPIEGSH 225
SFRVPED+DDRIP EEHLAYEPVLVHRE LLLAFT L L PHLP+VL+NHVAV ++ H
Sbjct: 415 SFRVPEDDDDRIPAEEHLAYEPVLVHREGLLLAFTSLWNLSPHLPDVLENHVAVTVKCPH 236
Query: 224 ATKQLLVVPAVDKNLGIILDAHHEHRERTGAELLFLLFYVGFFRHGR 84
ATKQLLVVPAVDK+LG++LDA HE E AELL LL + RH R
Sbjct: 235 ATKQLLVVPAVDKHLGVVLDAEHEDGEGARAELLLLLLPLIDRRHLR 95
Score = 172 bits (370), Expect = 2e-042
Identities = 73/108 (67%), Positives = 82/108 (75%)
Frame = +2 / +1
Query: 83 GAHGGRNQHKKGGRGVQHRSSLGAHDERQE*YPGSYQLPEQQEVAWSRASLRSALQHGS* 262
G G ++GG GVQH L H +RQE +PG+YQLPEQQEVAWSR + +LQHGS
Sbjct: 94 GGGGACRSGEEGGGGVQHGPPLHPHAQRQEQHPGAYQLPEQQEVAWSREGI*PSLQHGSR 273
Query: 263 ER*GDVDRGTEDR*RQEEGSPGEQGQVHKQDVPPWGFGHHCPQEPEMS 406
ER GDVD G++D *RQEEG PGEQGQVHKQDVPP GFGHH PQEPEMS
Sbjct: 274 ERQGDVD*GSKDW*RQEEGPPGEQGQVHKQDVPPRGFGHHRPQEPEMS 417
Score = 128 bits (274), Expect = 3e-029
Identities = 61/93 (65%), Positives = 66/93 (70%)
Frame = -1 / -3
Query: 405 LISGS*GQ**PNPHGGTSCL*TCPCSPGEPSSCLYXXXXXXXXXXXXSQEPCCSADRRLA 226
LISGS*G+**PNP GGTSCL*TCPCSPG PSSCLY S+EPCCS + +
Sbjct: 416 LISGS*GR**PNPRGGTSCL*TCPCSPGGPSSCLYQSLEPQSTSP*RSREPCCSDGQMPS 237
Query: 225 RDQATSCCSGS**EPGYYS*RSS*APREDRC*T 127
RDQATSCCSGS** PG S*R +* R C*T
Sbjct: 236 RDQATSCCSGS**APGCCS*R*A*GWRGGPC*T 138
>gb|CA001732.1|CA001732 HS05G17r HS Hordeum vulgare subsp. vulgare cDNA clone HS05G17
5-PRIME, mRNA sequence
Length = 533
Score = 226 bits (488), Expect = 1e-058
Identities = 95/99 (95%), Positives = 97/99 (97%)
Frame = +3 / +3
Query: 129 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 308
FSTGPLS+LM+SVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG
Sbjct: 183 FSTGPLSILMLSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 362
Query: 309 KKKALPVNKDRFISKMFLRGDSVIIVLRNPK*VACTRRE 425
KKKALPVNKDRFISKMFLRGDSVIIVLRNPK*V TRRE
Sbjct: 363 KKKALPVNKDRFISKMFLRGDSVIIVLRNPK*VWTTRRE 479
Score = 195 bits (421), Expect = 2e-049
Identities = 86/96 (89%), Positives = 86/96 (89%)
Frame = -3 / -2
Query: 424 SLRVQATHFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQ 245
S RV THFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQ
Sbjct: 478 SRRVVQTHFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQ 299
Query: 244 CRSKARTRPSNFLLFRQLIRTWVLFLTLIMSTERGP 137
RS A TRPSNFLLFRQLI TWVLFLTL M ERGP
Sbjct: 298 *RSNALTRPSNFLLFRQLISTWVLFLTLSMRMERGP 191
Score = 172 bits (370), Expect = 2e-042
Identities = 73/108 (67%), Positives = 82/108 (75%)
Frame = +2 / +2
Query: 83 GAHGGRNQHKKGGRGVQHRSSLGAHDERQE*YPGSYQLPEQQEVAWSRASLRSALQHGS* 262
G G ++GG GVQH L H +RQE +PG+YQLPEQQEVAWSR + +LQHGS
Sbjct: 137 GGGGACRSGEEGGGGVQHGPPLHPHAQRQEQHPGAYQLPEQQEVAWSREGI*PSLQHGSR 316
Query: 263 ER*GDVDRGTEDR*RQEEGSPGEQGQVHKQDVPPWGFGHHCPQEPEMS 406
ER GDVD G++D *RQEEG PGEQGQVHKQDVPP GFGHH PQEPEMS
Sbjct: 317 ERQGDVD*GSKDW*RQEEGPPGEQGQVHKQDVPPRGFGHHRPQEPEMS 460
Score = 172 bits (370), Expect = 2e-042
Identities = 76/107 (71%), Positives = 85/107 (79%)
Frame = -2 / -1
Query: 404 SFRVPEDNDDRIPTEEHLAYEPVLVHRESLLLAFTGLRYLGPHLPNVLKNHVAVPIEGSH 225
SFRVPED+DDRIP EEHLAYEPVLVHRE LLLAFT L L PHLP+VL+NHVAV ++ H
Sbjct: 458 SFRVPEDDDDRIPAEEHLAYEPVLVHREGLLLAFTSLWNLSPHLPDVLENHVAVTVKCPH 279
Query: 224 ATKQLLVVPAVDKNLGIILDAHHEHRERTGAELLFLLFYVGFFRHGR 84
ATKQLLVVPAVDK+LG++LDA HE E AELL LL + RH R
Sbjct: 278 ATKQLLVVPAVDKHLGVVLDAEHEDGEGARAELLLLLLPLIDRRHLR 138
Score = 128 bits (274), Expect = 3e-029
Identities = 61/93 (65%), Positives = 66/93 (70%)
Frame = -1 / -3
Query: 405 LISGS*GQ**PNPHGGTSCL*TCPCSPGEPSSCLYXXXXXXXXXXXXSQEPCCSADRRLA 226
LISGS*G+**PNP GGTSCL*TCPCSPG PSSCLY S+EPCCS + +
Sbjct: 459 LISGS*GR**PNPRGGTSCL*TCPCSPGGPSSCLYQSLEPQSTSP*RSREPCCSDGQMPS 280
Query: 225 RDQATSCCSGS**EPGYYS*RSS*APREDRC*T 127
RDQATSCCSGS** PG S*R +* R C*T
Sbjct: 279 RDQATSCCSGS**APGCCS*R*A*GWRGGPC*T 181
>gb|BQ761651.1|BQ761651 EBem10_SQ001_N07_R embryo, 2 Day germination, no treatment, cv
Optic, EBem10 Hordeum vulgare subsp. vulgare cDNA clone
EBem10_SQ001_N07 5', mRNA sequence
Length = 459
Score = 224 bits (484), Expect = 3e-058
Identities = 94/99 (94%), Positives = 96/99 (96%)
Frame = +3 / +1
Query: 129 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 308
FSTGPLS+LM+SVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG
Sbjct: 82 FSTGPLSILMLSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 261
Query: 309 KKKALPVNKDRFISKMFLRGDSVIIVLRNPK*VACTRRE 425
KKKALPVNKDRFISKMF RGDSVIIVLRNPK*V TRRE
Sbjct: 262 KKKALPVNKDRFISKMFFRGDSVIIVLRNPK*VWTTRRE 378
Score = 194 bits (418), Expect = 4e-049
Identities = 85/96 (88%), Positives = 86/96 (89%)
Frame = -3 / -2
Query: 424 SLRVQATHFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQ 245
S RV THFGFLRTMMTESPR+NILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQ
Sbjct: 377 SRRVVQTHFGFLRTMMTESPRKNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQ 198
Query: 244 CRSKARTRPSNFLLFRQLIRTWVLFLTLIMSTERGP 137
RS A TRPSNFLLFRQLI TWVLFLTL M ERGP
Sbjct: 197 *RSNALTRPSNFLLFRQLISTWVLFLTLSMRMERGP 90
Score = 171 bits (369), Expect = 2e-042
Identities = 76/107 (71%), Positives = 85/107 (79%)
Frame = -2 / -1
Query: 404 SFRVPEDNDDRIPTEEHLAYEPVLVHRESLLLAFTGLRYLGPHLPNVLKNHVAVPIEGSH 225
SFRVPED+DDRIP EEHLAYEPVLVHRE LLLAFT L L PHLP+VL+NHVAV ++ H
Sbjct: 357 SFRVPEDDDDRIPAEEHLAYEPVLVHREGLLLAFTSLWNLSPHLPDVLENHVAVTVKCPH 178
Query: 224 ATKQLLVVPAVDKNLGIILDAHHEHRERTGAELLFLLFYVGFFRHGR 84
ATKQLLVVPAVDK+LG++LDA HE E AELL LL + RH R
Sbjct: 177 ATKQLLVVPAVDKHLGVVLDAEHEDGEGPRAELLLLLLPLIDRRHLR 37
Score = 168 bits (362), Expect = 2e-041
Identities = 72/108 (66%), Positives = 82/108 (75%)
Frame = +2 / +3
Query: 83 GAHGGRNQHKKGGRGVQHRSSLGAHDERQE*YPGSYQLPEQQEVAWSRASLRSALQHGS* 262
G G ++GG GVQH + L H +RQE +PG+YQLPEQQEVAWSR + +LQHGS
Sbjct: 36 GGGGACRSGEEGGGGVQHGAPLHPHAQRQEQHPGAYQLPEQQEVAWSREGI*PSLQHGSR 215
Query: 263 ER*GDVDRGTEDR*RQEEGSPGEQGQVHKQDVPPWGFGHHCPQEPEMS 406
ER GDVD G++D *RQEEG PGEQGQVHKQDV P GFGHH PQEPEMS
Sbjct: 216 ERQGDVD*GSKDW*RQEEGPPGEQGQVHKQDVLPRGFGHHRPQEPEMS 359
Score = 124 bits (265), Expect = 6e-028
Identities = 60/93 (64%), Positives = 65/93 (69%)
Frame = -1 / -3
Query: 405 LISGS*GQ**PNPHGGTSCL*TCPCSPGEPSSCLYXXXXXXXXXXXXSQEPCCSADRRLA 226
LISGS*G+**PNP G TSCL*TCPCSPG PSSCLY S+EPCCS + +
Sbjct: 358 LISGS*GR**PNPRGRTSCL*TCPCSPGGPSSCLYQSLEPQSTSP*RSREPCCSDGQMPS 179
Query: 225 RDQATSCCSGS**EPGYYS*RSS*APREDRC*T 127
RDQATSCCSGS** PG S*R +* R C*T
Sbjct: 178 RDQATSCCSGS**APGCCS*R*A*GWRGAPC*T 80
>gb|CA018517.1|CA018517 HV08N19r HV Hordeum vulgare subsp. vulgare cDNA clone HV08N19
5-PRIME, mRNA sequence
Length = 622
Score = 217 bits (469), Expect = 4e-056
Identities = 91/92 (98%), Positives = 92/92 (100%)
Frame = +3 / +1
Query: 129 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 308
FSTGPLS+LMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG
Sbjct: 142 FSTGPLSLLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 321
Query: 309 KKKALPVNKDRFISKMFLRGDSVIIVLRNPK* 404
KKKALPVNKDRFISKMFLRGDSVIIVLRNPK*
Sbjct: 322 KKKALPVNKDRFISKMFLRGDSVIIVLRNPK* 417
Score = 188 bits (405), Expect = 3e-047
Identities = 81/89 (91%), Positives = 83/89 (93%)
Frame = -3 / -3
Query: 403 HFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQCRSKART 224
HFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHIS TFSRTMLQ RS A T
Sbjct: 416 HFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISRTFSRTMLQ*RSNALT 237
Query: 223 RPSNFLLFRQLIRTWVLFLTLIMSTERGP 137
RPS+FLLFRQLI TWVLFLTLIMS +RGP
Sbjct: 236 RPSSFLLFRQLISTWVLFLTLIMSRDRGP 150
Score = 162 bits (349), Expect = 1e-039
Identities = 67/100 (67%), Positives = 78/100 (78%)
Frame = +2 / +3
Query: 104 QHKKGGRGVQHRSSLGAHDERQE*YPGSYQLPEQQEVAWSRASLRSALQHGS*ER*GDVD 283
Q ++GG GVQHR+ + AHDERQE YPG+YQLPEQQE WSR S+ +LQHGS ER GDVD
Sbjct: 117 QCEEGGGGVQHRAPVPAHDERQEQYPGTYQLPEQQEATWSRESI*PSLQHGSRERSGDVD 296
Query: 284 RGTEDR*RQEEGSPGEQGQVHKQDVPPWGFGHHCPQEPEM 403
G++D RQEEG EQGQVH+QDVPP GHHC +EPEM
Sbjct: 297 *GSKDWQRQEEGPSSEQGQVHQQDVPPRRLGHHCSKEPEM 416
Score = 160 bits (343), Expect = 1e-038
Identities = 69/101 (68%), Positives = 80/101 (79%)
Frame = -2 / -2
Query: 404 SFRVPEDNDDRIPTEEHLAYEPVLVHRESLLLAFTGLRYLGPHLPNVLKNHVAVPIEGSH 225
SFRVP +NDDR+ EEHLA EPVLVH + LLLAF L L PHLPNVL+NHVA+ ++ SH
Sbjct: 417 SFRVP*NNDDRVAAEEHLADEPVLVHWKGLLLAFASLWNLSPHLPNVLENHVAMTVKCSH 238
Query: 224 ATKQLLVVPAVDKNLGIILDAHHEHRERTGAELLFLLFYVG 102
ATK LLVVPAVDK LGI+LDAHHE + GAELL LL ++G
Sbjct: 237 ATK*LLVVPAVDKYLGIVLDAHHEQGQGPGAELLLLLLHIG 115
Score = 111 bits (237), Expect = 4e-024
Identities = 55/93 (59%), Positives = 61/93 (65%)
Frame = -1 / -1
Query: 405 LISGS*GQ**PNPHGGTSCL*TCPCSPGEPSSCLYXXXXXXXXXXXXSQEPCCSADRRLA 226
+ISGS Q**P+ GGTSC *TCPCS PSSCL S+EPCC+ + L+
Sbjct: 418 IISGSLEQ**PSRRGGTSC**TCPCSLEGPSSCLCQSLEPQSTSPERSREPCCNDGQMLS 239
Query: 225 RDQATSCCSGS**EPGYYS*RSS*APREDRC*T 127
RDQ SCCSGS** PGY S*RSS*A RC*T
Sbjct: 238 RDQVASCCSGS**VPGYCS*RSS*AGTGARC*T 140
>gb|CA029325.1|CA029325 HZ64N23r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ64N23
5-PRIME, mRNA sequence
Length = 461
Score = 217 bits (469), Expect = 4e-056
Identities = 91/92 (98%), Positives = 92/92 (100%)
Frame = +3 / +3
Query: 129 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 308
FSTGPLS+LMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG
Sbjct: 159 FSTGPLSLLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 338
Query: 309 KKKALPVNKDRFISKMFLRGDSVIIVLRNPK* 404
KKKALPVNKDRFISKMFLRGDSVIIVLRNPK*
Sbjct: 339 KKKALPVNKDRFISKMFLRGDSVIIVLRNPK* 434
Score = 188 bits (405), Expect = 3e-047
Identities = 81/89 (91%), Positives = 83/89 (93%)
Frame = -3 / -2
Query: 403 HFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQCRSKART 224
HFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHIS TFSRTMLQ RS A T
Sbjct: 433 HFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISRTFSRTMLQ*RSNALT 254
Query: 223 RPSNFLLFRQLIRTWVLFLTLIMSTERGP 137
RPS+FLLFRQLI TWVLFLTLIMS +RGP
Sbjct: 253 RPSSFLLFRQLISTWVLFLTLIMSRDRGP 167
Score = 162 bits (349), Expect = 1e-039
Identities = 67/100 (67%), Positives = 78/100 (78%)
Frame = +2 / +2
Query: 104 QHKKGGRGVQHRSSLGAHDERQE*YPGSYQLPEQQEVAWSRASLRSALQHGS*ER*GDVD 283
Q ++GG GVQHR+ + AHDERQE YPG+YQLPEQQE WSR S+ +LQHGS ER GDVD
Sbjct: 134 QCEEGGGGVQHRAPVPAHDERQEQYPGTYQLPEQQEATWSRESI*PSLQHGSRERSGDVD 313
Query: 284 RGTEDR*RQEEGSPGEQGQVHKQDVPPWGFGHHCPQEPEM 403
G++D RQEEG EQGQVH+QDVPP GHHC +EPEM
Sbjct: 314 *GSKDWQRQEEGPSSEQGQVHQQDVPPRRLGHHCSKEPEM 433
Score = 160 bits (343), Expect = 1e-038
Identities = 69/101 (68%), Positives = 80/101 (79%)
Frame = -2 / -1
Query: 404 SFRVPEDNDDRIPTEEHLAYEPVLVHRESLLLAFTGLRYLGPHLPNVLKNHVAVPIEGSH 225
SFRVP +NDDR+ EEHLA EPVLVH + LLLAF L L PHLPNVL+NHVA+ ++ SH
Sbjct: 434 SFRVP*NNDDRVAAEEHLADEPVLVHWKGLLLAFASLWNLSPHLPNVLENHVAMTVKCSH 255
Query: 224 ATKQLLVVPAVDKNLGIILDAHHEHRERTGAELLFLLFYVG 102
ATK LLVVPAVDK LGI+LDAHHE + GAELL LL ++G
Sbjct: 254 ATK*LLVVPAVDKYLGIVLDAHHEQGQGPGAELLLLLLHIG 132
Score = 111 bits (237), Expect = 4e-024
Identities = 55/93 (59%), Positives = 61/93 (65%)
Frame = -1 / -3
Query: 405 LISGS*GQ**PNPHGGTSCL*TCPCSPGEPSSCLYXXXXXXXXXXXXSQEPCCSADRRLA 226
+ISGS Q**P+ GGTSC *TCPCS PSSCL S+EPCC+ + L+
Sbjct: 435 IISGSLEQ**PSRRGGTSC**TCPCSLEGPSSCLCQSLEPQSTSPERSREPCCNDGQMLS 256
Query: 225 RDQATSCCSGS**EPGYYS*RSS*APREDRC*T 127
RDQ SCCSGS** PGY S*RSS*A RC*T
Sbjct: 255 RDQVASCCSGS**VPGYCS*RSS*AGTGARC*T 157
>gb|CV056821.1|CV056821 BNEL21a1 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL21a1 5' similar to small nuclear
ribonucleoprotein D2, putative / snRNP core protein D2,
putative / Sm protein D2, putative, mRNA sequence
Length = 629
Score = 217 bits (469), Expect = 4e-056
Identities = 91/92 (98%), Positives = 92/92 (100%)
Frame = +3 / +2
Query: 129 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 308
FSTGPLS+LMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG
Sbjct: 134 FSTGPLSLLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 313
Query: 309 KKKALPVNKDRFISKMFLRGDSVIIVLRNPK* 404
KKKALPVNKDRFISKMFLRGDSVIIVLRNPK*
Sbjct: 314 KKKALPVNKDRFISKMFLRGDSVIIVLRNPK* 409
Score = 188 bits (405), Expect = 3e-047
Identities = 81/89 (91%), Positives = 83/89 (93%)
Frame = -3 / -3
Query: 403 HFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQCRSKART 224
HFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHIS TFSRTMLQ RS A T
Sbjct: 408 HFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISRTFSRTMLQ*RSNALT 229
Query: 223 RPSNFLLFRQLIRTWVLFLTLIMSTERGP 137
RPS+FLLFRQLI TWVLFLTLIMS +RGP
Sbjct: 228 RPSSFLLFRQLISTWVLFLTLIMSRDRGP 142
Score = 162 bits (349), Expect = 1e-039
Identities = 67/100 (67%), Positives = 78/100 (78%)
Frame = +2 / +1
Query: 104 QHKKGGRGVQHRSSLGAHDERQE*YPGSYQLPEQQEVAWSRASLRSALQHGS*ER*GDVD 283
Q ++GG GVQHR+ + AHDERQE YPG+YQLPEQQE WSR S+ +LQHGS ER GDVD
Sbjct: 109 QCEEGGGGVQHRAPVPAHDERQEQYPGTYQLPEQQEATWSRESI*PSLQHGSRERSGDVD 288
Query: 284 RGTEDR*RQEEGSPGEQGQVHKQDVPPWGFGHHCPQEPEM 403
G++D RQEEG EQGQVH+QDVPP GHHC +EPEM
Sbjct: 289 *GSKDWQRQEEGPSSEQGQVHQQDVPPRRLGHHCSKEPEM 408
Score = 160 bits (343), Expect = 1e-038
Identities = 69/101 (68%), Positives = 80/101 (79%)
Frame = -2 / -2
Query: 404 SFRVPEDNDDRIPTEEHLAYEPVLVHRESLLLAFTGLRYLGPHLPNVLKNHVAVPIEGSH 225
SFRVP +NDDR+ EEHLA EPVLVH + LLLAF L L PHLPNVL+NHVA+ ++ SH
Sbjct: 409 SFRVP*NNDDRVAAEEHLADEPVLVHWKGLLLAFASLWNLSPHLPNVLENHVAMTVKCSH 230
Query: 224 ATKQLLVVPAVDKNLGIILDAHHEHRERTGAELLFLLFYVG 102
ATK LLVVPAVDK LGI+LDAHHE + GAELL LL ++G
Sbjct: 229 ATK*LLVVPAVDKYLGIVLDAHHEQGQGPGAELLLLLLHIG 107
Score = 111 bits (237), Expect = 4e-024
Identities = 55/93 (59%), Positives = 61/93 (65%)
Frame = -1 / -1
Query: 405 LISGS*GQ**PNPHGGTSCL*TCPCSPGEPSSCLYXXXXXXXXXXXXSQEPCCSADRRLA 226
+ISGS Q**P+ GGTSC *TCPCS PSSCL S+EPCC+ + L+
Sbjct: 410 IISGSLEQ**PSRRGGTSC**TCPCSLEGPSSCLCQSLEPQSTSPERSREPCCNDGQMLS 231
Query: 225 RDQATSCCSGS**EPGYYS*RSS*APREDRC*T 127
RDQ SCCSGS** PGY S*RSS*A RC*T
Sbjct: 230 RDQVASCCSGS**VPGYCS*RSS*AGTGARC*T 132
>gb|CV059292.1|CV059292 BNEL46e5 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL46e5 5' similar to small nuclear
ribonucleoprotein D2, putative / snRNP core protein D2,
putative / Sm protein D2, putative, mRNA sequence
Length = 643
Score = 217 bits (469), Expect = 4e-056
Identities = 91/92 (98%), Positives = 92/92 (100%)
Frame = +3 / +2
Query: 129 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 308
FSTGPLS+LMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG
Sbjct: 134 FSTGPLSLLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 313
Query: 309 KKKALPVNKDRFISKMFLRGDSVIIVLRNPK* 404
KKKALPVNKDRFISKMFLRGDSVIIVLRNPK*
Sbjct: 314 KKKALPVNKDRFISKMFLRGDSVIIVLRNPK* 409
Score = 188 bits (405), Expect = 3e-047
Identities = 81/89 (91%), Positives = 83/89 (93%)
Frame = -3 / -2
Query: 403 HFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQCRSKART 224
HFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHIS TFSRTMLQ RS A T
Sbjct: 408 HFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISRTFSRTMLQ*RSNALT 229
Query: 223 RPSNFLLFRQLIRTWVLFLTLIMSTERGP 137
RPS+FLLFRQLI TWVLFLTLIMS +RGP
Sbjct: 228 RPSSFLLFRQLISTWVLFLTLIMSRDRGP 142
Score = 162 bits (349), Expect = 1e-039
Identities = 67/100 (67%), Positives = 78/100 (78%)
Frame = +2 / +1
Query: 104 QHKKGGRGVQHRSSLGAHDERQE*YPGSYQLPEQQEVAWSRASLRSALQHGS*ER*GDVD 283
Q ++GG GVQHR+ + AHDERQE YPG+YQLPEQQE WSR S+ +LQHGS ER GDVD
Sbjct: 109 QCEEGGGGVQHRAPVPAHDERQEQYPGTYQLPEQQEATWSRESI*PSLQHGSRERSGDVD 288
Query: 284 RGTEDR*RQEEGSPGEQGQVHKQDVPPWGFGHHCPQEPEM 403
G++D RQEEG EQGQVH+QDVPP GHHC +EPEM
Sbjct: 289 *GSKDWQRQEEGPSSEQGQVHQQDVPPRRLGHHCSKEPEM 408
Score = 160 bits (343), Expect = 1e-038
Identities = 69/101 (68%), Positives = 80/101 (79%)
Frame = -2 / -1
Query: 404 SFRVPEDNDDRIPTEEHLAYEPVLVHRESLLLAFTGLRYLGPHLPNVLKNHVAVPIEGSH 225
SFRVP +NDDR+ EEHLA EPVLVH + LLLAF L L PHLPNVL+NHVA+ ++ SH
Sbjct: 409 SFRVP*NNDDRVAAEEHLADEPVLVHWKGLLLAFASLWNLSPHLPNVLENHVAMTVKCSH 230
Query: 224 ATKQLLVVPAVDKNLGIILDAHHEHRERTGAELLFLLFYVG 102
ATK LLVVPAVDK LGI+LDAHHE + GAELL LL ++G
Sbjct: 229 ATK*LLVVPAVDKYLGIVLDAHHEQGQGPGAELLLLLLHIG 107
Score = 111 bits (237), Expect = 4e-024
Identities = 55/93 (59%), Positives = 61/93 (65%)
Frame = -1 / -3
Query: 405 LISGS*GQ**PNPHGGTSCL*TCPCSPGEPSSCLYXXXXXXXXXXXXSQEPCCSADRRLA 226
+ISGS Q**P+ GGTSC *TCPCS PSSCL S+EPCC+ + L+
Sbjct: 410 IISGSLEQ**PSRRGGTSC**TCPCSLEGPSSCLCQSLEPQSTSPERSREPCCNDGQMLS 231
Query: 225 RDQATSCCSGS**EPGYYS*RSS*APREDRC*T 127
RDQ SCCSGS** PGY S*RSS*A RC*T
Sbjct: 230 RDQVASCCSGS**VPGYCS*RSS*AGTGARC*T 132
>gb|AV928185.1|AV928185 AV928185 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd27e17 3', mRNA sequence
Length = 728
Score = 216 bits (466), Expect = 1e-055
Identities = 90/92 (97%), Positives = 92/92 (100%)
Frame = +3 / -1
Query: 129 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 308
FSTGPLS+LMMSVKNNTQVLINCRNNKKLLGR+RAFDRHCNMVLENVREMWTEVPKTGKG
Sbjct: 518 FSTGPLSLLMMSVKNNTQVLINCRNNKKLLGRMRAFDRHCNMVLENVREMWTEVPKTGKG 339
Query: 309 KKKALPVNKDRFISKMFLRGDSVIIVLRNPK* 404
KKKALPVNKDRFISKMFLRGDSVIIVLRNPK*
Sbjct: 338 KKKALPVNKDRFISKMFLRGDSVIIVLRNPK* 243
Score = 186 bits (401), Expect = 1e-046
Identities = 81/94 (86%), Positives = 84/94 (89%)
Frame = -3 / +1
Query: 418 RVQATHFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQCR 239
R + H GFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQ R
Sbjct: 229 RHRLNHLGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQ*R 408
Query: 238 SKARTRPSNFLLFRQLIRTWVLFLTLIMSTERGP 137
S A RPS+FLLFRQLI TWVLFLTLIMS +RGP
Sbjct: 409 SNALMRPSSFLLFRQLISTWVLFLTLIMSRDRGP 510
Score = 161 bits (346), Expect = 4e-039
Identities = 66/100 (66%), Positives = 78/100 (78%)
Frame = +2 / -3
Query: 104 QHKKGGRGVQHRSSLGAHDERQE*YPGSYQLPEQQEVAWSRASLRSALQHGS*ER*GDVD 283
Q ++GG GVQHR+ + AHDERQE YPG+YQLPEQQE WS S+ +LQHGS ER*GDVD
Sbjct: 543 QCEEGGGGVQHRAPVPAHDERQEQYPGTYQLPEQQEATWSHESI*PSLQHGSRER*GDVD 364
Query: 284 RGTEDR*RQEEGSPGEQGQVHKQDVPPWGFGHHCPQEPEM 403
G++D RQEEG EQGQVH+QDVPP GHHC +EP+M
Sbjct: 363 *GSKDWQRQEEGPSSEQGQVHQQDVPPRRLGHHCSKEPQM 244
Score = 156 bits (336), Expect = 9e-038
Identities = 68/101 (67%), Positives = 79/101 (78%)
Frame = -2 / +3
Query: 404 SFRVPEDNDDRIPTEEHLAYEPVLVHRESLLLAFTGLRYLGPHLPNVLKNHVAVPIEGSH 225
SF VP +NDDR+ EEHLA EPVLVH + LLLAF L L PHLPNVL+NHVA+ ++ SH
Sbjct: 243 SFGVP*NNDDRVAAEEHLADEPVLVHWKGLLLAFASLWNLSPHLPNVLENHVAMTVKCSH 422
Query: 224 ATKQLLVVPAVDKNLGIILDAHHEHRERTGAELLFLLFYVG 102
ATK LLVVPAVDK LGI+LDAHHE + GAELL LL ++G
Sbjct: 423 ATK*LLVVPAVDKYLGIVLDAHHEQGQGPGAELLLLLLHIG 545
Score = 103 bits (219), Expect = 1e-021
Identities = 53/93 (56%), Positives = 59/93 (63%)
Frame = -1 / +2
Query: 405 LISGS*GQ**PNPHGGTSCL*TCPCSPGEPSSCLYXXXXXXXXXXXXSQEPCCSADRRLA 226
+I GS Q**P+ GGTSC *TCPCS PSSCL S+EPCC+ + L+
Sbjct: 242 IIWGSLEQ**PSRRGGTSC**TCPCSLEGPSSCLCQSLEPQSTSP*RSREPCCNDGQMLS 421
Query: 225 RDQATSCCSGS**EPGYYS*RSS*APREDRC*T 127
DQ SCCSGS** PGY S*RSS*A RC*T
Sbjct: 422 CDQVASCCSGS**VPGYCS*RSS*AGTGARC*T 520
>gb|AV930242.1|AV930242 AV930242 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd21j01 3', mRNA sequence
Length = 628
Score = 216 bits (466), Expect = 1e-055
Identities = 90/92 (97%), Positives = 92/92 (100%)
Frame = +3 / -2
Query: 129 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 308
FSTGPLS+LMMSVKNNTQVLINCRNNKKLLGR+RAFDRHCNMVLENVREMWTEVPKTGKG
Sbjct: 525 FSTGPLSLLMMSVKNNTQVLINCRNNKKLLGRMRAFDRHCNMVLENVREMWTEVPKTGKG 346
Query: 309 KKKALPVNKDRFISKMFLRGDSVIIVLRNPK* 404
KKKALPVNKDRFISKMFLRGDSVIIVLRNPK*
Sbjct: 345 KKKALPVNKDRFISKMFLRGDSVIIVLRNPK* 250
Score = 186 bits (401), Expect = 1e-046
Identities = 81/94 (86%), Positives = 84/94 (89%)
Frame = -3 / +2
Query: 418 RVQATHFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQCR 239
R + H GFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQ R
Sbjct: 236 RHRLNHLGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQ*R 415
Query: 238 SKARTRPSNFLLFRQLIRTWVLFLTLIMSTERGP 137
S A RPS+FLLFRQLI TWVLFLTLIMS +RGP
Sbjct: 416 SNALMRPSSFLLFRQLISTWVLFLTLIMSRDRGP 517
Score = 158 bits (340), Expect = 2e-038
Identities = 65/100 (65%), Positives = 77/100 (77%)
Frame = +2 / -1
Query: 104 QHKKGGRGVQHRSSLGAHDERQE*YPGSYQLPEQQEVAWSRASLRSALQHGS*ER*GDVD 283
Q ++ G GVQHR+ + AHDERQE YPG+YQLPEQQE WS S+ +LQHGS ER*GDVD
Sbjct: 550 QCEEXGXGVQHRAPVPAHDERQEQYPGTYQLPEQQEATWSHESI*PSLQHGSRER*GDVD 371
Query: 284 RGTEDR*RQEEGSPGEQGQVHKQDVPPWGFGHHCPQEPEM 403
G++D RQEEG EQGQVH+QDVPP GHHC +EP+M
Sbjct: 370 *GSKDWQRQEEGPSSEQGQVHQQDVPPRRLGHHCSKEPQM 251
Score = 156 bits (336), Expect = 9e-038
Identities = 68/101 (67%), Positives = 79/101 (78%)
Frame = -2 / +1
Query: 404 SFRVPEDNDDRIPTEEHLAYEPVLVHRESLLLAFTGLRYLGPHLPNVLKNHVAVPIEGSH 225
SF VP +NDDR+ EEHLA EPVLVH + LLLAF L L PHLPNVL+NHVA+ ++ SH
Sbjct: 250 SFGVP*NNDDRVAAEEHLADEPVLVHWKGLLLAFASLWNLSPHLPNVLENHVAMTVKCSH 429
Query: 224 ATKQLLVVPAVDKNLGIILDAHHEHRERTGAELLFLLFYVG 102
ATK LLVVPAVDK LGI+LDAHHE + GAELL LL ++G
Sbjct: 430 ATK*LLVVPAVDKYLGIVLDAHHEQGQGPGAELLLLLLHIG 552
Score = 103 bits (219), Expect = 1e-021
Identities = 53/93 (56%), Positives = 59/93 (63%)
Frame = -1 / +3
Query: 405 LISGS*GQ**PNPHGGTSCL*TCPCSPGEPSSCLYXXXXXXXXXXXXSQEPCCSADRRLA 226
+I GS Q**P+ GGTSC *TCPCS PSSCL S+EPCC+ + L+
Sbjct: 249 IIWGSLEQ**PSRRGGTSC**TCPCSLEGPSSCLCQSLEPQSTSP*RSREPCCNDGQMLS 428
Query: 225 RDQATSCCSGS**EPGYYS*RSS*APREDRC*T 127
DQ SCCSGS** PGY S*RSS*A RC*T
Sbjct: 429 CDQVASCCSGS**VPGYCS*RSS*AGTGARC*T 527
>gb|AL510410.1|AL510410 AL510410 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY04N11u 3',
mRNA sequence
Length = 554
Score = 215 bits (463), Expect = 3e-055
Identities = 91/97 (93%), Positives = 93/97 (95%)
Frame = +3 / -3
Query: 135 TGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKK 314
TGPL +LM+SVKNNTQVLIN RNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKK
Sbjct: 507 TGPLXILMLSVKNNTQVLINXRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKK 328
Query: 315 KALPVNKDRFISKMFLRGDSVIIVLRNPK*VACTRRE 425
KALPVNKDRFISKMFLRGDSVIIVLRNPK*V TRRE
Sbjct: 327 KALPVNKDRFISKMFLRGDSVIIVLRNPK*VWTTRRE 217
Score = 190 bits (409), Expect = 8e-048
Identities = 84/96 (87%), Positives = 84/96 (87%)
Frame = -3 / +2
Query: 424 SLRVQATHFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQ 245
S RV THFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQ
Sbjct: 218 SRRVVQTHFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQ 397
Query: 244 CRSKARTRPSNFLLFRQLIRTWVLFLTLIMSTERGP 137
RS A TRPSNFLLFR LI TWVLFLTL M RGP
Sbjct: 398 *RSNALTRPSNFLLFRXLISTWVLFLTLSMRMXRGP 505
Score = 160 bits (343), Expect = 1e-038
Identities = 66/87 (75%), Positives = 74/87 (85%)
Frame = -2 / +1
Query: 404 SFRVPEDNDDRIPTEEHLAYEPVLVHRESLLLAFTGLRYLGPHLPNVLKNHVAVPIEGSH 225
SFRVPED+DDRIP EEHLAYEPVLVHRE LLLAFT L L PHLP+VL+NHVAV ++ H
Sbjct: 238 SFRVPEDDDDRIPAEEHLAYEPVLVHREGLLLAFTSLWNLSPHLPDVLENHVAVTVKCPH 417
Query: 224 ATKQLLVVPAVDKNLGIILDAHHEHRE 144
ATKQLLVVP VDK+LG++LDA HE E
Sbjct: 418 ATKQLLVVPXVDKHLGVVLDAEHEDGE 498
Score = 157 bits (338), Expect = 5e-038
Identities = 68/101 (67%), Positives = 75/101 (74%)
Frame = +2 / -2
Query: 104 QHKKGGRGVQHRSSLGAHDERQE*YPGSYQLPEQQEVAWSRASLRSALQHGS*ER*GDVD 283
Q KK H H +RQE +PG+YQLPEQQEVAWSR + +LQHGS ER GDVD
Sbjct: 538 QGKKEEEEFXHGPPXHPHAQRQEQHPGAYQLPEQQEVAWSREGI*PSLQHGSRERQGDVD 359
Query: 284 RGTEDR*RQEEGSPGEQGQVHKQDVPPWGFGHHCPQEPEMS 406
G++D *RQEEG PGEQGQVHKQDVPP GFGHH PQEPEMS
Sbjct: 358 *GSKDW*RQEEGPPGEQGQVHKQDVPPRGFGHHRPQEPEMS 236
Score = 124 bits (265), Expect = 6e-028
Identities = 56/81 (69%), Positives = 60/81 (74%)
Frame = -1 / +3
Query: 405 LISGS*GQ**PNPHGGTSCL*TCPCSPGEPSSCLYXXXXXXXXXXXXSQEPCCSADRRLA 226
LISGS*G+**PNP GGTSCL*TCPCSPG PSSCLY S+EPCCS + +
Sbjct: 237 LISGS*GR**PNPRGGTSCL*TCPCSPGGPSSCLYQSLEPQSTSP*RSREPCCSDGQMPS 416
Query: 225 RDQATSCCSGS**EPGYYS*R 163
RDQATSCCSGS** PG S*R
Sbjct: 417 RDQATSCCSGS**APGCCS*R 479
>gb|BQ466427.1|BQ466427 HT02I03r HT Hordeum vulgare subsp. vulgare cDNA clone HT02I03
5-PRIME, mRNA sequence
Length = 623
Score = 215 bits (463), Expect = 3e-055
Identities = 90/92 (97%), Positives = 91/92 (98%)
Frame = +3 / +2
Query: 129 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 308
FST PLS+LMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG
Sbjct: 116 FSTAPLSLLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 295
Query: 309 KKKALPVNKDRFISKMFLRGDSVIIVLRNPK* 404
KKKALPVNKDRFISKMFLRGDSVIIVLRNPK*
Sbjct: 296 KKKALPVNKDRFISKMFLRGDSVIIVLRNPK* 391
Score = 185 bits (398), Expect = 2e-046
Identities = 80/88 (90%), Positives = 82/88 (93%)
Frame = -3 / -3
Query: 403 HFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQCRSKART 224
HFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHIS TFSRTMLQ RS A T
Sbjct: 390 HFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISRTFSRTMLQ*RSNALT 211
Query: 223 RPSNFLLFRQLIRTWVLFLTLIMSTERG 140
RPS+FLLFRQLI TWVLFLTLIMS +RG
Sbjct: 210 RPSSFLLFRQLISTWVLFLTLIMSRDRG 127
Score = 162 bits (349), Expect = 1e-039
Identities = 67/100 (67%), Positives = 78/100 (78%)
Frame = +2 / +1
Query: 104 QHKKGGRGVQHRSSLGAHDERQE*YPGSYQLPEQQEVAWSRASLRSALQHGS*ER*GDVD 283
Q ++GG GVQHR+ + AHDERQE YPG+YQLPEQQE WSR S+ +LQHGS ER GDVD
Sbjct: 91 QCEEGGGGVQHRAPVPAHDERQEQYPGTYQLPEQQEATWSRESI*PSLQHGSGERSGDVD 270
Query: 284 RGTEDR*RQEEGSPGEQGQVHKQDVPPWGFGHHCPQEPEM 403
G++D RQEEG EQGQVH+QDVPP GHHC +EPEM
Sbjct: 271 *GSKDWQRQEEGPSSEQGQVHQQDVPPRRLGHHCSKEPEM 390
Score = 160 bits (343), Expect = 1e-038
Identities = 69/101 (68%), Positives = 80/101 (79%)
Frame = -2 / -2
Query: 404 SFRVPEDNDDRIPTEEHLAYEPVLVHRESLLLAFTGLRYLGPHLPNVLKNHVAVPIEGSH 225
SFRVP +NDDR+ EEHLA EPVLVH + LLLAF L L PHLPNVL+NHVA+ ++ SH
Sbjct: 391 SFRVP*NNDDRVAAEEHLADEPVLVHWKGLLLAFASLWNLSPHLPNVLQNHVAMTVKCSH 212
Query: 224 ATKQLLVVPAVDKNLGIILDAHHEHRERTGAELLFLLFYVG 102
ATK LLVVPAVDK LGI+LDAHHE + GAELL LL ++G
Sbjct: 211 ATK*LLVVPAVDKYLGIVLDAHHEQGQGRGAELLLLLLHIG 89
Score = 110 bits (235), Expect = 8e-024
Identities = 55/93 (59%), Positives = 60/93 (64%)
Frame = -1 / -1
Query: 405 LISGS*GQ**PNPHGGTSCL*TCPCSPGEPSSCLYXXXXXXXXXXXXSQEPCCSADRRLA 226
+ISGS Q**P+ GGTSC *TCPCS PSSCL S EPCC+ + L+
Sbjct: 392 IISGSLEQ**PSRRGGTSC**TCPCSLEGPSSCLCQSLEPQSTSPERSPEPCCNDGQMLS 213
Query: 225 RDQATSCCSGS**EPGYYS*RSS*APREDRC*T 127
RDQ SCCSGS** PGY S*RSS*A RC*T
Sbjct: 212 RDQVASCCSGS**VPGYCS*RSS*AGTGARC*T 114
>gb|BE195373.2|BE195373 HVSMEh0089A22f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0089A22f, mRNA sequence
Length = 958
Score = 189 bits (408), Expect(2) = 1e-052
Identities = 80/82 (97%), Positives = 80/82 (97%)
Frame = +3 / -1
Query: 180 QVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKALPVNKDRFISKMF 359
QVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKALPVNKDRFISKMF
Sbjct: 433 QVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKALPVNKDRFISKMF 254
Query: 360 LRGDSVIIVLRNPK*VACTRRE 425
LRGDSVIIVLRNPK*V TRRE
Sbjct: 253 LRGDSVIIVLRNPK*VWTTRRE 188
Score = 172 bits (370), Expect(2) = 1e-045
Identities = 75/82 (91%), Positives = 75/82 (91%)
Frame = -3 / +3
Query: 424 SLRVQATHFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQ 245
S RV THFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQ
Sbjct: 189 SRRVVQTHFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQ 368
Query: 244 CRSKARTRPSNFLLFRQLIRTW 179
RS A TRPSNFLLFRQLI TW
Sbjct: 369 *RSNALTRPSNFLLFRQLISTW 434
Score = 145 bits (312), Expect = 2e-034
Identities = 60/76 (78%), Positives = 65/76 (85%)
Frame = +2 / -3
Query: 179 PGSYQLPEQQEVAWSRASLRSALQHGS*ER*GDVDRGTEDR*RQEEGSPGEQGQVHKQDV 358
PG+YQLPEQQEVAWSR + +LQHGS ER GDVD G++D *RQEEG PGEQGQVHKQDV
Sbjct: 434 PGAYQLPEQQEVAWSREGI*PSLQHGSRERQGDVD*GSKDW*RQEEGPPGEQGQVHKQDV 255
Query: 359 PPWGFGHHCPQEPEMS 406
PP GFGHH PQEPEMS
Sbjct: 254 PPRGFGHHRPQEPEMS 207
Score = 145 bits (312), Expect(2) = 2e-035
Identities = 61/76 (80%), Positives = 67/76 (88%)
Frame = -2 / +2
Query: 404 SFRVPEDNDDRIPTEEHLAYEPVLVHRESLLLAFTGLRYLGPHLPNVLKNHVAVPIEGSH 225
SFRVPED+DDRIP EEHLAYEPVLVHRE LLLAFT L L PHLP+VL+NHVAV ++ H
Sbjct: 209 SFRVPEDDDDRIPAEEHLAYEPVLVHREGLLLAFTSLWNLSPHLPDVLENHVAVTVKCPH 388
Query: 224 ATKQLLVVPAVDKNLG 177
ATKQLLVVPAVDK+LG
Sbjct: 389 ATKQLLVVPAVDKHLG 436
Score = 121 bits (259), Expect = 4e-027
Identities = 53/76 (69%), Positives = 57/76 (75%)
Frame = -1 / +1
Query: 405 LISGS*GQ**PNPHGGTSCL*TCPCSPGEPSSCLYXXXXXXXXXXXXSQEPCCSADRRLA 226
LISGS*G+**PNP GGTSCL*TCPCSPG PSSCLY S+EPCCS + +
Sbjct: 208 LISGS*GR**PNPRGGTSCL*TCPCSPGGPSSCLYQSLEPQSTSP*RSREPCCSDGQMPS 387
Query: 225 RDQATSCCSGS**EPG 178
RDQATSCCSGS** PG
Sbjct: 388 RDQATSCCSGS**APG 435
Score = 36.8 bits (74), Expect(2) = 1e-052
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = +3 / -3
Query: 129 FSTGPLSVLMMSVKNNT 179
FSTGPLS+LM+SVK NT
Sbjct: 485 FSTGPLSILMLSVKTNT 435
Score = 30.9 bits (61), Expect(2) = 1e-045
Identities = 14/23 (60%), Positives = 15/23 (65%)
Frame = -2 / +3
Query: 179 GIILDAHHEHRERTGAELLFLLF 111
G+ LDA HE E AELL LLF
Sbjct: 435 GVGLDAEHEDGEGARAELLLLLF 503
Score = 23.1 bits (44), Expect(2) = 2e-035
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -3 / +1
Query: 178 VLFLTLIMSTERGP 137
VL LTL M ERGP
Sbjct: 436 VLVLTLSMRMERGP 477
>gb|CA028862.1|CA028862 HZ63H11r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ63H11
5-PRIME, mRNA sequence
Length = 390
Score = 186 bits (400), Expect = 1e-046
Identities = 76/77 (98%), Positives = 77/77 (100%)
Frame = +3 / +3
Query: 129 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 308
FSTGPLS+LMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG
Sbjct: 159 FSTGPLSLLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 338
Query: 309 KKKALPVNKDRFISKMF 359
KKKALPVNKDRFISKMF
Sbjct: 339 KKKALPVNKDRFISKMF 389
Score = 151 bits (324), Expect = 4e-036
Identities = 66/74 (89%), Positives = 68/74 (91%)
Frame = -3 / -3
Query: 358 NILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQCRSKARTRPSNFLLFRQLIRTW 179
NILLMNLSLFTGRAFFLPLPVFGTSVHIS TFSRTMLQ RS A TRPS+FLLFRQLI TW
Sbjct: 388 NILLMNLSLFTGRAFFLPLPVFGTSVHISRTFSRTMLQ*RSNALTRPSSFLLFRQLISTW 209
Query: 178 VLFLTLIMSTERGP 137
VLFLTLIMS +RGP
Sbjct: 208 VLFLTLIMSRDRGP 167
Score = 135 bits (290), Expect = 2e-031
Identities = 59/86 (68%), Positives = 68/86 (79%)
Frame = -2 / -2
Query: 359 EHLAYEPVLVHRESLLLAFTGLRYLGPHLPNVLKNHVAVPIEGSHATKQLLVVPAVDKNL 180
EHLA EPVLVH + LLLAF L L PHLPNVL+NHVA+ ++ SHATK LLVVPAVDK L
Sbjct: 389 EHLADEPVLVHWKGLLLAFASLWNLSPHLPNVLENHVAMTVKCSHATK*LLVVPAVDKYL 210
Query: 179 GIILDAHHEHRERTGAELLFLLFYVG 102
GI+LDAHHE + GAELL LL ++G
Sbjct: 209 GIVLDAHHEQGQGPGAELLLLLLHIG 132
Score = 134 bits (287), Expect = 5e-031
Identities = 57/85 (67%), Positives = 67/85 (78%)
Frame = +2 / +2
Query: 104 QHKKGGRGVQHRSSLGAHDERQE*YPGSYQLPEQQEVAWSRASLRSALQHGS*ER*GDVD 283
Q ++GG GVQHR+ + AHDERQE YPG+YQLPEQQE WSR S+ +LQHGS ER GDVD
Sbjct: 134 QCEEGGGGVQHRAPVPAHDERQEQYPGTYQLPEQQEATWSRESI*PSLQHGSRERSGDVD 313
Query: 284 RGTEDR*RQEEGSPGEQGQVHKQDV 358
G++D RQEEG EQGQVH+QDV
Sbjct: 314 *GSKDWQRQEEGPSSEQGQVHQQDV 388
>gb|CA001262.1|CA001262 HS18J05u HS Hordeum vulgare subsp. vulgare cDNA clone HS18J05
3-PRIME, mRNA sequence
Length = 492
Score = 185 bits (399), Expect = 2e-046
Identities = 78/80 (97%), Positives = 78/80 (97%)
Frame = +3 / -2
Query: 186 LINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLR 365
LINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLR
Sbjct: 491 LINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLR 312
Query: 366 GDSVIIVLRNPK*VACTRRE 425
GDSVIIVLRNPK*V TRRE
Sbjct: 311 GDSVIIVLRNPK*VWTTRRE 252
Score = 165 bits (355), Expect = 2e-040
Identities = 73/79 (92%), Positives = 73/79 (92%)
Frame = -3 / +1
Query: 424 SLRVQATHFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQ 245
S RV THFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQ
Sbjct: 253 SRRVVQTHFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQ 432
Query: 244 CRSKARTRPSNFLLFRQLI 188
RS A TRPSNFLLFRQLI
Sbjct: 433 *RSNALTRPSNFLLFRQLI 489
Score = 140 bits (301), Expect = 6e-033
Identities = 59/73 (80%), Positives = 64/73 (87%)
Frame = -2 / +3
Query: 404 SFRVPEDNDDRIPTEEHLAYEPVLVHRESLLLAFTGLRYLGPHLPNVLKNHVAVPIEGSH 225
SFRVPED+DDRIP EEHLAYEPVLVHRE LLLAFT L L PHLP+VL+NHVAV ++ H
Sbjct: 273 SFRVPEDDDDRIPAEEHLAYEPVLVHREGLLLAFTSLWNLSPHLPDVLENHVAVTVKCPH 452
Query: 224 ATKQLLVVPAVDK 186
ATKQLLVVPAVDK
Sbjct: 453 ATKQLLVVPAVDK 491
Score = 139 bits (299), Expect = 1e-032
Identities = 58/74 (78%), Positives = 63/74 (85%)
Frame = +2 / -1
Query: 185 SYQLPEQQEVAWSRASLRSALQHGS*ER*GDVDRGTEDR*RQEEGSPGEQGQVHKQDVPP 364
+YQLPEQQEVAWSR + +LQHGS ER GDVD G++D *RQEEG PGEQGQVHKQDVPP
Sbjct: 492 AYQLPEQQEVAWSREGI*PSLQHGSRERQGDVD*GSKDW*RQEEGPPGEQGQVHKQDVPP 313
Query: 365 WGFGHHCPQEPEMS 406
GFGHH PQEPEMS
Sbjct: 312 RGFGHHRPQEPEMS 271
Score = 116 bits (247), Expect = 2e-025
Identities = 51/73 (69%), Positives = 55/73 (75%)
Frame = -1 / +2
Query: 405 LISGS*GQ**PNPHGGTSCL*TCPCSPGEPSSCLYXXXXXXXXXXXXSQEPCCSADRRLA 226
LISGS*G+**PNP GGTSCL*TCPCSPG PSSCLY S+EPCCS + +
Sbjct: 272 LISGS*GR**PNPRGGTSCL*TCPCSPGGPSSCLYQSLEPQSTSP*RSREPCCSDGQMPS 451
Query: 225 RDQATSCCSGS** 187
RDQATSCCSGS**
Sbjct: 452 RDQATSCCSGS** 490
>gb|CA010137.1|CA010137 HT11K12u HT Hordeum vulgare subsp. vulgare cDNA clone HT11K12
3-PRIME, mRNA sequence
Length = 474
Score = 179 bits (386), Expect = 1e-044
Identities = 75/78 (96%), Positives = 76/78 (97%)
Frame = +3 / -1
Query: 192 NCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGD 371
+CRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGD
Sbjct: 465 DCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGD 286
Query: 372 SVIIVLRNPK*VACTRRE 425
SVIIVLRNPK*V TRRE
Sbjct: 285 SVIIVLRNPK*VWTTRRE 232
Score = 161 bits (347), Expect = 3e-039
Identities = 71/77 (92%), Positives = 71/77 (92%)
Frame = -3 / +2
Query: 424 SLRVQATHFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQ 245
S RV THFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQ
Sbjct: 233 SRRVVQTHFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQ 412
Query: 244 CRSKARTRPSNFLLFRQ 194
RS A TRPSNFLLFRQ
Sbjct: 413 *RSNALTRPSNFLLFRQ 463
Score = 135 bits (290), Expect = 2e-031
Identities = 57/71 (80%), Positives = 62/71 (87%)
Frame = -2 / +1
Query: 404 SFRVPEDNDDRIPTEEHLAYEPVLVHRESLLLAFTGLRYLGPHLPNVLKNHVAVPIEGSH 225
SFRVPED+DDRIP EEHLAYEPVLVHRE LLLAFT L L PHLP+VL+NHVAV ++ H
Sbjct: 253 SFRVPEDDDDRIPAEEHLAYEPVLVHREGLLLAFTSLWNLSPHLPDVLENHVAVTVKCPH 432
Query: 224 ATKQLLVVPAV 192
ATKQLLVVPAV
Sbjct: 433 ATKQLLVVPAV 465
Score = 133 bits (286), Expect = 7e-031
Identities = 56/71 (78%), Positives = 60/71 (84%)
Frame = +2 / -3
Query: 194 LPEQQEVAWSRASLRSALQHGS*ER*GDVDRGTEDR*RQEEGSPGEQGQVHKQDVPPWGF 373
LPEQQEVAWSR + +LQHGS ER GDVD G++D *RQEEG PGEQGQVHKQDVPP GF
Sbjct: 463 LPEQQEVAWSREGI*PSLQHGSRERQGDVD*GSKDW*RQEEGPPGEQGQVHKQDVPPRGF 284
Query: 374 GHHCPQEPEMS 406
GHH PQEPEMS
Sbjct: 283 GHHRPQEPEMS 251
Score = 115 bits (245), Expect = 3e-025
Identities = 49/71 (69%), Positives = 53/71 (74%)
Frame = -1 / +3
Query: 405 LISGS*GQ**PNPHGGTSCL*TCPCSPGEPSSCLYXXXXXXXXXXXXSQEPCCSADRRLA 226
LISGS*G+**PNP GGTSCL*TCPCSPG PSSCLY S+EPCCS + +
Sbjct: 252 LISGS*GR**PNPRGGTSCL*TCPCSPGGPSSCLYQSLEPQSTSP*RSREPCCSDGQMPS 431
Query: 225 RDQATSCCSGS 193
RDQATSCCSGS
Sbjct: 432 RDQATSCCSGS 464
>gb|AL511843.1|AL511843 AL511843 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY09H01u 3',
mRNA sequence
Length = 540
Score = 177 bits (382), Expect = 4e-044
Identities = 77/95 (81%), Positives = 80/95 (84%)
Frame = +3 / -3
Query: 141 PLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKA 320
PL + + + L RNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKA
Sbjct: 508 PLPSSCSASRTTPRCLSTARNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKA 329
Query: 321 LPVNKDRFISKMFLRGDSVIIVLRNPK*VACTRRE 425
LPVNKDRFISKMFLRGDSVIIVLRNPK*V TRRE
Sbjct: 328 LPVNKDRFISKMFLRGDSVIIVLRNPK*VWTTRRE 224
Score = 159 bits (342), Expect(2) = 2e-042
Identities = 70/76 (92%), Positives = 70/76 (92%)
Frame = -3 / +3
Query: 424 SLRVQATHFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQ 245
S RV THFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQ
Sbjct: 225 SRRVVQTHFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQ 404
Query: 244 CRSKARTRPSNFLLFR 197
RS A TRPSNFLLFR
Sbjct: 405 *RSNALTRPSNFLLFR 452
Score = 132 bits (282), Expect(2) = 2e-033
Identities = 55/69 (79%), Positives = 60/69 (86%)
Frame = -2 / +2
Query: 404 SFRVPEDNDDRIPTEEHLAYEPVLVHRESLLLAFTGLRYLGPHLPNVLKNHVAVPIEGSH 225
SFRVPED+DDRIP EEHLAYEPVLVHRE LLLAFT L L PHLP+VL+NHVAV ++ H
Sbjct: 245 SFRVPEDDDDRIPAEEHLAYEPVLVHREGLLLAFTSLWNLSPHLPDVLENHVAVTVKCPH 424
Query: 224 ATKQLLVVP 198
ATKQLLVVP
Sbjct: 425 ATKQLLVVP 451
Score = 132 bits (282), Expect(2) = 2e-036
Identities = 55/70 (78%), Positives = 59/70 (84%)
Frame = +2 / -2
Query: 197 PEQQEVAWSRASLRSALQHGS*ER*GDVDRGTEDR*RQEEGSPGEQGQVHKQDVPPWGFG 376
PEQQEVAWSR + +LQHGS ER GDVD G++D *RQEEG PGEQGQVHKQDVPP GFG
Sbjct: 452 PEQQEVAWSREGI*PSLQHGSRERQGDVD*GSKDW*RQEEGPPGEQGQVHKQDVPPRGFG 273
Query: 377 HHCPQEPEMS 406
HH PQEPEMS
Sbjct: 272 HHRPQEPEMS 243
Score = 113 bits (241), Expect = 1e-024
Identities = 48/70 (68%), Positives = 52/70 (74%)
Frame = -1 / +1
Query: 405 LISGS*GQ**PNPHGGTSCL*TCPCSPGEPSSCLYXXXXXXXXXXXXSQEPCCSADRRLA 226
LISGS*G+**PNP GGTSCL*TCPCSPG PSSCLY S+EPCCS + +
Sbjct: 244 LISGS*GR**PNPRGGTSCL*TCPCSPGGPSSCLYQSLEPQSTSP*RSREPCCSDGQMPS 423
Query: 225 RDQATSCCSG 196
RDQATSCCSG
Sbjct: 424 RDQATSCCSG 453
Score = 40.0 bits (81), Expect(2) = 2e-036
Identities = 15/25 (60%), Positives = 20/25 (80%)
Frame = +3 / -2
Query: 141 PLSVLMMSVKNNTQVLINCRNNKKL 215
P +LM+SVKNNTQVLINC +++
Sbjct: 509 PSPILMLSVKNNTQVLINCPEQQEV 435
Score = 32.7 bits (65), Expect(2) = 2e-042
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = -2 / +3
Query: 209 LVVPAVDKNLGIILDAHHE 153
L+ AVDK+LG++LDA HE
Sbjct: 441 LLFRAVDKHLGVVLDAEHE 497
Score = 30.4 bits (60), Expect(2) = 2e-033
Identities = 13/19 (68%), Positives = 13/19 (68%)
Frame = -3 / +1
Query: 196 QLIRTWVLFLTLIMSTERG 140
QLI TWVLFLTL M G
Sbjct: 454 QLISTWVLFLTLSMRMGEG 510
>gb|CA014548.1|CA014548 HT11K12r HT Hordeum vulgare subsp. vulgare cDNA clone HT11K12
5-PRIME, mRNA sequence
Length = 474
Score = 137 bits (294), Expect(2) = 1e-038
Identities = 58/61 (95%), Positives = 59/61 (96%)
Frame = +3 / +3
Query: 243 HCNMVLENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK*VACTRR 422
+CNMVLENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK*V TRR
Sbjct: 60 YCNMVLENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK*VWTTRR 239
Query: 423 E 425
E
Sbjct: 240 E 242
Score = 132 bits (283), Expect(2) = 1e-034
Identities = 57/60 (95%), Positives = 57/60 (95%)
Frame = -3 / -3
Query: 424 SLRVQATHFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQ 245
S RV THFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQ
Sbjct: 241 SRRVVQTHFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQ 62
Score = 109 bits (233), Expect(2) = 4e-027
Identities = 45/54 (83%), Positives = 48/54 (88%)
Frame = -2 / -2
Query: 404 SFRVPEDNDDRIPTEEHLAYEPVLVHRESLLLAFTGLRYLGPHLPNVLKNHVAV 243
SFRVPED+DDRIP EEHLAYEPVLVHRE LLLAFT L L PHLP+VL+NHVAV
Sbjct: 221 SFRVPEDDDDRIPAEEHLAYEPVLVHREGLLLAFTSLWNLSPHLPDVLENHVAV 60
Score = 108 bits (231), Expect(2) = 1e-026
Identities = 45/56 (80%), Positives = 48/56 (85%)
Frame = +2 / +2
Query: 239 SALQHGS*ER*GDVDRGTEDR*RQEEGSPGEQGQVHKQDVPPWGFGHHCPQEPEMS 406
+ LQHGS ER GDVD G++D *RQEEG PGEQGQVHKQDVPP GFGHH PQEPEMS
Sbjct: 56 TVLQHGSRERQGDVD*GSKDW*RQEEGPPGEQGQVHKQDVPPRGFGHHRPQEPEMS 223
Score = 42.3 bits (86), Expect(2) = 1e-038
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +3 / +1
Query: 192 NCRNNKKLLGRVRAFDR 242
+CRNNKKLLGRVRAFDR
Sbjct: 10 DCRNNKKLLGRVRAFDR 60
Score = 34.1 bits (68), Expect(2) = 1e-034
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = -3 / -2
Query: 241 RSKARTRPSNFLLFRQ 194
RS A TRPSNFLLFRQ
Sbjct: 59 RSNALTRPSNFLLFRQ 12
Score = 31.3 bits (62), Expect(2) = 4e-027
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = -1 / -3
Query: 228 ARDQATSCCSGS 193
+RDQATSCCSGS
Sbjct: 46 SRDQATSCCSGS 11
Score = 30.4 bits (60), Expect(2) = 1e-026
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +2 / +3
Query: 194 LPEQQEVAWSRASL 235
LPEQQEVAWSR +
Sbjct: 12 LPEQQEVAWSREGI 53
>gb|CA004752.1|CA004752 HS18J05r HS Hordeum vulgare subsp. vulgare cDNA clone HS18J05
5-PRIME, mRNA sequence
Length = 376
Score = 146 bits (313), Expect = 1e-034
Identities = 58/60 (96%), Positives = 60/60 (100%)
Frame = +3 / +2
Query: 129 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 308
FSTGPLS+LM+SVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG
Sbjct: 197 FSTGPLSILMLSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 376
Score = 114 bits (244), Expect = 4e-025
Identities = 50/57 (87%), Positives = 50/57 (87%)
Frame = -3 / -2
Query: 307 PLPVFGTSVHISLTFSRTMLQCRSKARTRPSNFLLFRQLIRTWVLFLTLIMSTERGP 137
PLPVFGTSVHISLTFSRTMLQ RS A TRPSNFLLFRQLI TWVLFLTL M ERGP
Sbjct: 375 PLPVFGTSVHISLTFSRTMLQ*RSNALTRPSNFLLFRQLISTWVLFLTLSMRMERGP 205
Score = 102 bits (217), Expect = 2e-021
Identities = 47/75 (62%), Positives = 55/75 (73%)
Frame = -2 / -1
Query: 308 AFTGLRYLGPHLPNVLKNHVAVPIEGSHATKQLLVVPAVDKNLGIILDAHHEHRERTGAE 129
AFT L L PHLP+VL+NHVAV ++ HATKQLLVVPAVDK+LG++LDA HE E AE
Sbjct: 376 AFTSLWNLSPHLPDVLENHVAVTVKCPHATKQLLVVPAVDKHLGVVLDAEHEDGEGARAE 197
Query: 128 LLFLLFYVGFFRHGR 84
LL LL + RH R
Sbjct: 196 LLLLLLPLIDRRHLR 152
>gb|BM374705.1|BM374705 EBma05_SQ002_I15_R maternal, 12 DPA, no treatment, cv Optic, EBma05
Hordeum vulgare subsp. vulgare cDNA clone
EBma05_SQ002_I15 5', mRNA sequence
Length = 393
Score = 140 bits (300), Expect = 8e-033
Identities = 59/61 (96%), Positives = 59/61 (96%)
Frame = +3 / +1
Query: 243 HCNMVLENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK*VACTRR 422
HCNMVLENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK*V TRR
Sbjct: 1 HCNMVLENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK*VWTTRR 180
Query: 423 E 425
E
Sbjct: 181 E 183
Score = 132 bits (283), Expect = 2e-030
Identities = 57/60 (95%), Positives = 57/60 (95%)
Frame = -3 / -2
Query: 424 SLRVQATHFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQ 245
S RV THFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQ
Sbjct: 182 SRRVVQTHFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQ 3
Score = 109 bits (233), Expect = 1e-023
Identities = 45/54 (83%), Positives = 48/54 (88%)
Frame = -2 / -1
Query: 404 SFRVPEDNDDRIPTEEHLAYEPVLVHRESLLLAFTGLRYLGPHLPNVLKNHVAV 243
SFRVPED+DDRIP EEHLAYEPVLVHRE LLLAFT L L PHLP+VL+NHVAV
Sbjct: 162 SFRVPEDDDDRIPAEEHLAYEPVLVHREGLLLAFTSLWNLSPHLPDVLENHVAV 1
Score = 108 bits (230), Expect = 4e-023
Identities = 45/54 (83%), Positives = 47/54 (87%)
Frame = +2 / +3
Query: 245 LQHGS*ER*GDVDRGTEDR*RQEEGSPGEQGQVHKQDVPPWGFGHHCPQEPEMS 406
LQHGS ER GDVD G++D *RQEEG PGEQGQVHKQDVPP GFGHH PQEPEMS
Sbjct: 3 LQHGSRERQGDVD*GSKDW*RQEEGPPGEQGQVHKQDVPPRGFGHHRPQEPEMS 164
>gb|AV925110.1|AV925110 AV925110 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd21j01 5', mRNA sequence
Length = 513
Score = 127 bits (273), Expect = 4e-029
Identities = 51/53 (96%), Positives = 53/53 (100%)
Frame = +3 / +1
Query: 129 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTE 287
FSTGPLS+LMMSVKNNTQVLINCRNNKKLLGR+RAFDRHCNMVLENVREMWTE
Sbjct: 355 FSTGPLSLLMMSVKNNTQVLINCRNNKKLLGRMRAFDRHCNMVLENVREMWTE 513
Score = 104 bits (221), Expect = 6e-022
Identities = 43/62 (69%), Positives = 51/62 (82%)
Frame = -2 / -1
Query: 287 LGPHLPNVLKNHVAVPIEGSHATKQLLVVPAVDKNLGIILDAHHEHRERTGAELLFLLFY 108
L PHLPNVL+NHVA+ ++ SHATK LLVVPAVDK LGI+LDAHHE + GAELL LL +
Sbjct: 513 LSPHLPNVLENHVAMTVKCSHATK*LLVVPAVDKYLGIVLDAHHEQGQGPGAELLLLLLH 334
Query: 107 VG 102
+G
Sbjct: 333 IG 328
>gb|BJ468792.1|BJ468792 BJ468792 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd27e17 5', mRNA sequence
Length = 499
Score = 123 bits (263), Expect = 1e-027
Identities = 49/51 (96%), Positives = 51/51 (100%)
Frame = +3 / +3
Query: 129 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMW 281
FSTGPLS+LMMSVKNNTQVLINCRNNKKLLGR+RAFDRHCNMVLENVREMW
Sbjct: 345 FSTGPLSLLMMSVKNNTQVLINCRNNKKLLGRMRAFDRHCNMVLENVREMW 497
Score = 102 bits (217), Expect = 2e-021
Identities = 42/60 (70%), Positives = 50/60 (83%)
Frame = -2 / -3
Query: 281 PHLPNVLKNHVAVPIEGSHATKQLLVVPAVDKNLGIILDAHHEHRERTGAELLFLLFYVG 102
PHLPNVL+NHVA+ ++ SHATK LLVVPAVDK LGI+LDAHHE + GAELL LL ++G
Sbjct: 497 PHLPNVLENHVAMTVKCSHATK*LLVVPAVDKYLGIVLDAHHEQGQGPGAELLLLLLHIG 318
>gb|CA025713.1|CA025713 HZ52P01r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ52P01
5-PRIME, mRNA sequence
Length = 396
Score = 123 bits (263), Expect = 1e-027
Identities = 52/52 (100%), Positives = 52/52 (100%)
Frame = +3 / +1
Query: 249 NMVLENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK* 404
NMVLENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK*
Sbjct: 13 NMVLENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK* 168
Score = 121 bits (259), Expect = 4e-027
Identities = 51/52 (98%), Positives = 51/52 (98%)
Frame = -3 / -2
Query: 403 HFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTML 248
HFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHIS TFSRTML
Sbjct: 167 HFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISRTFSRTML 12
>gb|BI951216.1|BI951216 HVSMEl0025B11f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0025B11f, mRNA sequence
Length = 406
Score = 114 bits (244), Expect = 4e-025
Identities = 48/48 (100%), Positives = 48/48 (100%)
Frame = +3 / +1
Query: 261 ENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK* 404
ENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK*
Sbjct: 1 ENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK* 144
Score = 111 bits (238), Expect = 3e-024
Identities = 47/52 (90%), Positives = 48/52 (92%)
Frame = -3 / -3
Query: 418 RVQATHFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTF 263
R + H GFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTF
Sbjct: 158 RHRLNHLGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTF 3
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 319,734,325
Number of Sequences: 312970
Number of extensions: 5058175
Number of successful extensions: 64439
Number of sequences better than 1.0e-020: 44
length of database: 58,378,179
effective HSP length: 51
effective length of database: 42,416,709
effective search space used: 7338090657
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)