TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2943966.2.1
(599 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BF630744.2|BF630744 HVSMEb0013N02f Hordeum vulgare seedl... 223 6e-058
gb|BI957447.1|BI957447 HVSMEn0009J18f Hordeum vulgare rachi... 223 6e-058
gb|BJ467041.1|BJ467041 BJ467041 K. Sato unpublished cDNA li... 223 6e-058
gb|BJ468176.1|BJ468176 BJ468176 K. Sato unpublished cDNA li... 223 6e-058
gb|CA016838.1|CA016838 HV05N12u HV Hordeum vulgare subsp. v... 223 6e-058
gb|CB878369.1|CB878369 HP08E22T HP Hordeum vulgare subsp. v... 223 6e-058
gb|BG300054.1|BG300054 HVSMEb0011D09f Hordeum vulgare seedl... 219 1e-056
gb|BI958431.1|BI958431 HVSMEn0014O22f Hordeum vulgare rachi... 218 2e-056
gb|BI958752.1|BI958752 HVSMEn0016H12f Hordeum vulgare rachi... 217 3e-056
gb|BE213939.2|BE213939 HV_CEb0001L07f Hordeum vulgare seedl... 216 6e-056
gb|BF064997.3|BF064997 HV_CEb0022G03f Hordeum vulgare seedl... 212 1e-054
gb|BJ464739.1|BJ464739 BJ464739 K. Sato unpublished cDNA li... 207 4e-053
gb|BI779178.2|BI779178 EBro01_SQ003_D18_R root, 3 week, hyd... 203 9e-052
gb|BF257218.2|BF257218 HVSMEf0012D15f Hordeum vulgare seedl... 198 3e-050
gb|BE558675.1|BE558675 HV_CEb0020A16f Hordeum vulgare seedl... 198 3e-050
gb|CB878414.1|CB878414 HP08H09T HP Hordeum vulgare subsp. v... 188 2e-047
gb|BF259495.2|BF259495 HVSMEf0019H19f Hordeum vulgare seedl... 187 6e-047
gb|BI960118.1|BI960118 HVSMEn0023E18f Hordeum vulgare rachi... 187 6e-047
gb|BI960325.1|BI960325 HVSMEn0024D19f Hordeum vulgare rachi... 187 6e-047
gb|BU979082.1|BU979082 HA15B18r HA Hordeum vulgare subsp. v... 187 6e-047
gb|BU979265.1|BU979265 HA15J22r HA Hordeum vulgare subsp. v... 187 6e-047
gb|CA030887.1|CA030887 HX08G19r HX Hordeum vulgare subsp. v... 187 6e-047
gb|CB859935.1|CB859935 HI12A22w HI Hordeum vulgare subsp. v... 187 6e-047
gb|CB859954.1|CB859954 HI12C04w HI Hordeum vulgare subsp. v... 187 6e-047
gb|BI958437.1|BI958437 HVSMEn0014P16f Hordeum vulgare rachi... 186 8e-047
gb|BF626523.2|BF626523 HVSMEa0018K06f Hordeum vulgare seedl... 186 1e-046
gb|BI957613.1|BI957613 HVSMEn0010F23f Hordeum vulgare rachi... 180 1e-046
gb|BF254858.3|BF254858 HVSMEf0005D24f Hordeum vulgare seedl... 182 1e-045
gb|CA016746.1|CA016746 HV06J09u HV Hordeum vulgare subsp. v... 178 2e-044
gb|BI960058.1|BI960058 HVSMEn0023A12f Hordeum vulgare rachi... 175 2e-043
gb|CA006913.1|CA006913 HU06B07r HU Hordeum vulgare subsp. v... 172 1e-042
gb|BQ661977.1|BQ661977 HR01B07u HR Hordeum vulgare subsp. v... 169 1e-041
gb|BQ762267.1|BQ762267 EBro01_SQ005_F11_R root, 3 week, hyd... 168 3e-041
gb|BE214450.2|BE214450 HV_CEb0003H21f Hordeum vulgare seedl... 165 2e-040
gb|BU977318.1|BU977318 HA11D12u HA Hordeum vulgare subsp. v... 151 7e-040
gb|AL503249.1|AL503249 AL503249 Hordeum vulgare Barke roots... 159 1e-038
gb|BE216491.2|BE216491 HV_CEb0010K05f Hordeum vulgare seedl... 159 1e-038
gb|BF624054.2|BF624054 HVSMEa0009A08f Hordeum vulgare seedl... 158 2e-038
gb|BJ549094.1|BJ549094 BJ549094 K. Sato unpublished cDNA li... 157 4e-038
gb|BI960166.1|BI960166 HVSMEn0023I06f Hordeum vulgare rachi... 156 1e-037
gb|BE559087.1|BE559087 HV_CEb0022L14f Hordeum vulgare seedl... 155 1e-037
gb|BF260414.3|BF260414 HVSMEf0021O22f Hordeum vulgare seedl... 152 2e-037
gb|CA017209.1|CA017209 HV14G11u HV Hordeum vulgare subsp. v... 152 2e-037
gb|BQ660910.1|BQ660910 HM01A23w HM Hordeum vulgare subsp. v... 152 2e-037
gb|BE519617.1|BE519617 HV_CEb0016H01f Hordeum vulgare seedl... 155 2e-037
gb|BJ466490.1|BJ466490 BJ466490 K. Sato unpublished cDNA li... 151 4e-037
gb|BE519891.1|BE519891 HV_CEb0021J17f Hordeum vulgare seedl... 153 1e-036
gb|BQ661501.1|BQ661501 HM03L08u HM Hordeum vulgare subsp. v... 152 1e-036
gb|BF065240.1|BF065240 HV_CEb0024I11f Hordeum vulgare seedl... 148 1e-036
gb|AV924692.1|AV924692 AV924692 K. Sato unpublished cDNA li... 150 6e-036
gb|AV929789.1|AV929789 AV929789 K. Sato unpublished cDNA li... 149 1e-035
gb|BF256995.2|BF256995 HVSMEf0011J05f Hordeum vulgare seedl... 144 3e-034
gb|BM370604.2|BM370604 EBro08_SQ004_L13_R root, 3 week, dro... 144 3e-034
gb|BF625981.2|BF625981 HVSMEa0015B13f Hordeum vulgare seedl... 130 3e-033
gb|CB880406.1|CB880406 HM06H04w HM Hordeum vulgare subsp. v... 141 4e-033
gb|BQ763567.1|BQ763567 EBro02_SQ008_E22_R root, 3 week, hyd... 139 1e-032
gb|BG415448.2|BG415448 HVSMEk0006I14f Hordeum vulgare testa... 135 2e-032
gb|BI960399.1|BI960399 HVSMEn0024H14f Hordeum vulgare rachi... 138 2e-032
gb|CA007423.1|CA007423 HU07O17r HU Hordeum vulgare subsp. v... 134 3e-032
gb|CA001451.1|CA001451 HS17P10u HS Hordeum vulgare subsp. v... 137 6e-032
gb|BF259949.2|BF259949 HVSMEf0020L06f Hordeum vulgare seedl... 135 2e-031
gb|BE216025.2|BE216025 HV_CEb0009C13f Hordeum vulgare seedl... 134 3e-031
gb|BI950057.1|BI950057 HVSMEl0018B24f Hordeum vulgare spike... 134 4e-031
gb|BI956791.1|BI956791 HVSMEn0005F21f Hordeum vulgare rachi... 133 8e-031
gb|BI957710.1|BI957710 HVSMEn0010N01f Hordeum vulgare rachi... 133 1e-030
gb|AL500625.1|AL500625 AL500625 Hordeum vulgare Barke roots... 123 5e-030
gb|BI959235.1|BI959235 HVSMEn0018M17f Hordeum vulgare rachi... 128 2e-029
gb|BJ549697.1|BJ549697 BJ549697 K. Sato unpublished cDNA li... 128 2e-029
gb|BI960119.1|BI960119 HVSMEn0023E19f Hordeum vulgare rachi... 127 7e-029
gb|BI957460.1|BI957460 HVSMEn0009L10f Hordeum vulgare rachi... 126 1e-028
gb|AL500661.1|AL500661 AL500661 Hordeum vulgare Barke roots... 126 1e-028
gb|BG370011.2|BG370011 HVSMEi0026P07f Hordeum vulgare 20 DA... 126 1e-028
gb|AL504625.1|AL504625 AL504625 Hordeum vulgare Barke roots... 125 2e-028
gb|CB880402.1|CB880402 HM06G24w HM Hordeum vulgare subsp. v... 72 2e-028
gb|BI959367.1|BI959367 HVSMEn0019G08f Hordeum vulgare rachi... 123 9e-028
gb|BF629072.2|BF629072 HVSMEb0009M09f Hordeum vulgare seedl... 122 2e-027
gb|BQ460884.1|BQ460884 HE01O17r HE Hordeum vulgare subsp. v... 119 1e-026
gb|BU977235.1|BU977235 HA11B05r HA Hordeum vulgare subsp. v... 119 1e-026
gb|BI960120.1|BI960120 HVSMEn0023E20f Hordeum vulgare rachi... 90 3e-026
gb|BI959561.1|BI959561 HVSMEn0020D05f Hordeum vulgare rachi... 117 6e-026
gb|BF264389.2|BF264389 HV_CEa0009E18f Hordeum vulgare seedl... 114 3e-025
gb|CA016710.1|CA016710 HV06L01u HV Hordeum vulgare subsp. v... 114 4e-025
gb|CA016634.1|CA016634 HV08B21u HV Hordeum vulgare subsp. v... 111 2e-024
gb|BI959659.1|BI959659 HVSMEn0020K11f Hordeum vulgare rachi... 89 3e-024
gb|AL502956.1|AL502956 AL502956 Hordeum vulgare Barke roots... 111 5e-024
gb|BF256079.2|BF256079 HVSMEf0008K20f Hordeum vulgare seedl... 106 9e-024
gb|CA020338.1|CA020338 HZ36A04r HZ Hordeum vulgare subsp. v... 108 2e-023
gb|BF627066.2|BF627066 HVSMEb0002G16f Hordeum vulgare seedl... 104 4e-023
gb|BF630555.2|BF630555 HVSMEb0011I21f Hordeum vulgare seedl... 75 8e-023
gb|BI959396.1|BI959396 HVSMEn0019I08f Hordeum vulgare rachi... 105 2e-022
gb|BQ467961.1|BQ467961 HR01H17r HR Hordeum vulgare subsp. v... 105 2e-022
gb|CA021273.1|CA021273 HZ39J21r HZ Hordeum vulgare subsp. v... 105 2e-022
gb|AL503230.1|AL503230 AL503230 Hordeum vulgare Barke roots... 105 3e-022
gb|BI952091.1|BI952091 HVSMEm0004J09f Hordeum vulgare green... 73 5e-022
gb|BF261040.2|BF261040 HVSMEf0023J16f Hordeum vulgare seedl... 76 5e-022
gb|BU994270.1|BU994270 HM06G24r HM Hordeum vulgare subsp. v... 72 7e-022
gb|BF065210.2|BF065210 HV_CEb0024C21f Hordeum vulgare seedl... 100 5e-021
gb|BI959395.1|BI959395 HVSMEn0019I06f Hordeum vulgare rachi... 100 5e-021
gb|AV916275.1|AV916275 AV916275 K. Sato unpublished cDNA li... 72 6e-021
>gb|BF630744.2|BF630744 HVSMEb0013N02f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0013N02f, mRNA sequence
Length = 756
Score = 223 bits (482), Expect = 6e-058
Identities = 91/124 (73%), Positives = 107/124 (86%)
Frame = -2 / +2
Query: 598 ERAGVAGKVDFREGPALGNLDELLADEANLGAFDFAFVDADKPNYFNYHEQLLRLVRVGG 419
E+AG+A KVDFREG L L+ELLA++ ++DFAFVDADKPNY YHEQLLRLVRVGG
Sbjct: 185 EKAGMAHKVDFREGTGLERLEELLAEDDGAASYDFAFVDADKPNYVRYHEQLLRLVRVGG 364
Query: 418 TIVYDNTLWCGTVAMPPETPMSDIDRRFSAAIRDLNVRLSADERVEVCQLAIADGVTICR 239
TI+YDNTLW GTVA+P TP+SD+D RFSAA+RDLN +L+AD R+EVCQLAIADGVTICR
Sbjct: 365 TIIYDNTLWGGTVALPAGTPLSDLDTRFSAALRDLNAKLAADPRIEVCQLAIADGVTICR 544
Query: 238 RLV* 227
R+V*
Sbjct: 545 RVV* 556
Score = 127 bits (271), Expect(2) = 5e-032
Identities = 63/86 (73%), Positives = 64/86 (74%)
Frame = +3 / -1
Query: 231 TRRRQMVTPSAMAS*QTSTRSSAERRTLRSLMAAENLLSMSDMGVSGGMATVPHQSVLSY 410
T RRQMVTPSAMAS QTS R SA LRSL AAE +S SD GV G ATVP QSVLS
Sbjct: 552 TTRRQMVTPSAMASWQTSMRGSAASLALRSLRAAEKRVSRSDKGVPAGSATVPPQSVLS* 373
Query: 411 TMVPPTRTRRSSCSW*LK*LGLSAST 488
MVPPTRT RSSCSW* *LGLSAST
Sbjct: 372 MMVPPTRTSRSSCSW*RT*LGLSAST 295
Score = 105 bits (225), Expect = 3e-022
Identities = 47/69 (68%), Positives = 52/69 (75%)
Frame = +2 / -3
Query: 230 DEAAANGDAVGDGELTDLNALVRGEANVEVPDGGREPPVDVRHGRLRWHGHGPAPERVVV 409
D+AAA+GDAVGDGEL DL+A V GE VEVP+GG E V+V GR R H APERVVV
Sbjct: 553 DDAAADGDAVGDGELADLDARVGGELGVEVPEGGGEAGVEVGQGRARRQRHRAAPERVVV 374
Query: 410 HDGAADAHQ 436
DGAADAHQ
Sbjct: 373 DDGAADAHQ 347
Score = 30.4 bits (60), Expect(2) = 5e-032
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = +2 / -3
Query: 548 QRGALAEVDLARHAGAL 598
Q GALAEV L RHAG L
Sbjct: 235 QAGALAEVHLVRHAGLL 185
>gb|BI957447.1|BI957447 HVSMEn0009J18f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0009J18f, mRNA sequence
Length = 667
Score = 223 bits (482), Expect = 6e-058
Identities = 91/124 (73%), Positives = 107/124 (86%)
Frame = -2 / +1
Query: 598 ERAGVAGKVDFREGPALGNLDELLADEANLGAFDFAFVDADKPNYFNYHEQLLRLVRVGG 419
E+AG+A KVDFREG L L+ELLA++ ++DFAFVDADKPNY YHEQLLRLVRVGG
Sbjct: 178 EKAGMAHKVDFREGTGLERLEELLAEDDGAASYDFAFVDADKPNYVRYHEQLLRLVRVGG 357
Query: 418 TIVYDNTLWCGTVAMPPETPMSDIDRRFSAAIRDLNVRLSADERVEVCQLAIADGVTICR 239
TI+YDNTLW GTVA+P TP+SD+D RFSAA+RDLN +L+AD R+EVCQLAIADGVTICR
Sbjct: 358 TIIYDNTLWGGTVALPAGTPLSDLDTRFSAALRDLNAKLAADPRIEVCQLAIADGVTICR 537
Query: 238 RLV* 227
R+V*
Sbjct: 538 RVV* 549
Score = 127 bits (271), Expect(2) = 5e-032
Identities = 63/86 (73%), Positives = 64/86 (74%)
Frame = +3 / -3
Query: 231 TRRRQMVTPSAMAS*QTSTRSSAERRTLRSLMAAENLLSMSDMGVSGGMATVPHQSVLSY 410
T RRQMVTPSAMAS QTS R SA LRSL AAE +S SD GV G ATVP QSVLS
Sbjct: 545 TTRRQMVTPSAMASWQTSMRGSAASLALRSLRAAEKRVSRSDKGVPAGSATVPPQSVLS* 366
Query: 411 TMVPPTRTRRSSCSW*LK*LGLSAST 488
MVPPTRT RSSCSW* *LGLSAST
Sbjct: 365 MMVPPTRTSRSSCSW*RT*LGLSAST 288
Score = 105 bits (225), Expect = 3e-022
Identities = 47/69 (68%), Positives = 52/69 (75%)
Frame = +2 / -2
Query: 230 DEAAANGDAVGDGELTDLNALVRGEANVEVPDGGREPPVDVRHGRLRWHGHGPAPERVVV 409
D+AAA+GDAVGDGEL DL+A V GE VEVP+GG E V+V GR R H APERVVV
Sbjct: 546 DDAAADGDAVGDGELADLDARVGGELGVEVPEGGGEAGVEVGQGRARRQRHRAAPERVVV 367
Query: 410 HDGAADAHQ 436
DGAADAHQ
Sbjct: 366 DDGAADAHQ 340
Score = 30.4 bits (60), Expect(2) = 5e-032
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = +2 / -2
Query: 548 QRGALAEVDLARHAGAL 598
Q GALAEV L RHAG L
Sbjct: 228 QAGALAEVHLVRHAGLL 178
>gb|BJ467041.1|BJ467041 BJ467041 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags35l16 3', mRNA sequence
Length = 705
Score = 223 bits (482), Expect = 6e-058
Identities = 91/124 (73%), Positives = 107/124 (86%)
Frame = -2 / -3
Query: 598 ERAGVAGKVDFREGPALGNLDELLADEANLGAFDFAFVDADKPNYFNYHEQLLRLVRVGG 419
E+AG+A KVDFREG L L+ELLA++ ++DFAFVDADKPNY YHEQLLRLVRVGG
Sbjct: 604 EKAGMAHKVDFREGTGLERLEELLAEDDGAASYDFAFVDADKPNYVRYHEQLLRLVRVGG 425
Query: 418 TIVYDNTLWCGTVAMPPETPMSDIDRRFSAAIRDLNVRLSADERVEVCQLAIADGVTICR 239
TI+YDNTLW GTVA+P TP+SD+D RFSAA+RDLN +L+AD R+EVCQLAIADGVTICR
Sbjct: 424 TIIYDNTLWGGTVALPAGTPLSDLDTRFSAALRDLNAKLAADPRIEVCQLAIADGVTICR 245
Query: 238 RLV* 227
R+V*
Sbjct: 244 RVV* 233
Score = 127 bits (271), Expect(2) = 5e-032
Identities = 63/86 (73%), Positives = 64/86 (74%)
Frame = +3 / +3
Query: 231 TRRRQMVTPSAMAS*QTSTRSSAERRTLRSLMAAENLLSMSDMGVSGGMATVPHQSVLSY 410
T RRQMVTPSAMAS QTS R SA LRSL AAE +S SD GV G ATVP QSVLS
Sbjct: 237 TTRRQMVTPSAMASWQTSMRGSAASLALRSLRAAEKRVSRSDKGVPAGSATVPPQSVLS* 416
Query: 411 TMVPPTRTRRSSCSW*LK*LGLSAST 488
MVPPTRT RSSCSW* *LGLSAST
Sbjct: 417 MMVPPTRTSRSSCSW*RT*LGLSAST 494
Score = 105 bits (225), Expect = 3e-022
Identities = 47/69 (68%), Positives = 52/69 (75%)
Frame = +2 / +2
Query: 230 DEAAANGDAVGDGELTDLNALVRGEANVEVPDGGREPPVDVRHGRLRWHGHGPAPERVVV 409
D+AAA+GDAVGDGEL DL+A V GE VEVP+GG E V+V GR R H APERVVV
Sbjct: 236 DDAAADGDAVGDGELADLDARVGGELGVEVPEGGGEAGVEVGQGRARRQRHRAAPERVVV 415
Query: 410 HDGAADAHQ 436
DGAADAHQ
Sbjct: 416 DDGAADAHQ 442
Score = 30.4 bits (60), Expect(2) = 5e-032
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = +2 / +2
Query: 548 QRGALAEVDLARHAGAL 598
Q GALAEV L RHAG L
Sbjct: 554 QAGALAEVHLVRHAGLL 604
>gb|BJ468176.1|BJ468176 BJ468176 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags37h18 3', mRNA sequence
Length = 630
Score = 223 bits (482), Expect = 6e-058
Identities = 91/124 (73%), Positives = 107/124 (86%)
Frame = -2 / -1
Query: 598 ERAGVAGKVDFREGPALGNLDELLADEANLGAFDFAFVDADKPNYFNYHEQLLRLVRVGG 419
E+AG+A KVDFREG L L+ELLA++ ++DFAFVDADKPNY YHEQLLRLVRVGG
Sbjct: 630 EKAGMAHKVDFREGTGLERLEELLAEDDGAASYDFAFVDADKPNYVRYHEQLLRLVRVGG 451
Query: 418 TIVYDNTLWCGTVAMPPETPMSDIDRRFSAAIRDLNVRLSADERVEVCQLAIADGVTICR 239
TI+YDNTLW GTVA+P TP+SD+D RFSAA+RDLN +L+AD R+EVCQLAIADGVTICR
Sbjct: 450 TIIYDNTLWGGTVALPAGTPLSDLDTRFSAALRDLNAKLAADPRIEVCQLAIADGVTICR 271
Query: 238 RLV* 227
R+V*
Sbjct: 270 RVV* 259
Score = 127 bits (271), Expect(2) = 5e-032
Identities = 63/86 (73%), Positives = 64/86 (74%)
Frame = +3 / +2
Query: 231 TRRRQMVTPSAMAS*QTSTRSSAERRTLRSLMAAENLLSMSDMGVSGGMATVPHQSVLSY 410
T RRQMVTPSAMAS QTS R SA LRSL AAE +S SD GV G ATVP QSVLS
Sbjct: 263 TTRRQMVTPSAMASWQTSMRGSAASLALRSLRAAEKRVSRSDKGVPAGSATVPPQSVLS* 442
Query: 411 TMVPPTRTRRSSCSW*LK*LGLSAST 488
MVPPTRT RSSCSW* *LGLSAST
Sbjct: 443 MMVPPTRTSRSSCSW*RT*LGLSAST 520
Score = 105 bits (225), Expect = 3e-022
Identities = 47/69 (68%), Positives = 52/69 (75%)
Frame = +2 / +1
Query: 230 DEAAANGDAVGDGELTDLNALVRGEANVEVPDGGREPPVDVRHGRLRWHGHGPAPERVVV 409
D+AAA+GDAVGDGEL DL+A V GE VEVP+GG E V+V GR R H APERVVV
Sbjct: 262 DDAAADGDAVGDGELADLDARVGGELGVEVPEGGGEAGVEVGQGRARRQRHRAAPERVVV 441
Query: 410 HDGAADAHQ 436
DGAADAHQ
Sbjct: 442 DDGAADAHQ 468
Score = 30.4 bits (60), Expect(2) = 5e-032
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = +2 / +1
Query: 548 QRGALAEVDLARHAGAL 598
Q GALAEV L RHAG L
Sbjct: 580 QAGALAEVHLVRHAGLL 630
>gb|CA016838.1|CA016838 HV05N12u HV Hordeum vulgare subsp. vulgare cDNA clone HV05N12
3-PRIME, mRNA sequence
Length = 544
Score = 223 bits (482), Expect = 6e-058
Identities = 91/124 (73%), Positives = 107/124 (86%)
Frame = -2 / -1
Query: 598 ERAGVAGKVDFREGPALGNLDELLADEANLGAFDFAFVDADKPNYFNYHEQLLRLVRVGG 419
E+AG+A KVDFREG L L+ELLA++ ++DFAFVDADKPNY YHEQLLRLVRVGG
Sbjct: 544 EKAGMAHKVDFREGTGLERLEELLAEDDGAASYDFAFVDADKPNYVRYHEQLLRLVRVGG 365
Query: 418 TIVYDNTLWCGTVAMPPETPMSDIDRRFSAAIRDLNVRLSADERVEVCQLAIADGVTICR 239
TI+YDNTLW GTVA+P TP+SD+D RFSAA+RDLN +L+AD R+EVCQLAIADGVTICR
Sbjct: 364 TIIYDNTLWGGTVALPAGTPLSDLDTRFSAALRDLNAKLAADPRIEVCQLAIADGVTICR 185
Query: 238 RLV* 227
R+V*
Sbjct: 184 RVV* 173
Score = 127 bits (271), Expect(2) = 5e-032
Identities = 63/86 (73%), Positives = 64/86 (74%)
Frame = +3 / +3
Query: 231 TRRRQMVTPSAMAS*QTSTRSSAERRTLRSLMAAENLLSMSDMGVSGGMATVPHQSVLSY 410
T RRQMVTPSAMAS QTS R SA LRSL AAE +S SD GV G ATVP QSVLS
Sbjct: 177 TTRRQMVTPSAMASWQTSMRGSAASLALRSLRAAEKRVSRSDKGVPAGSATVPPQSVLS* 356
Query: 411 TMVPPTRTRRSSCSW*LK*LGLSAST 488
MVPPTRT RSSCSW* *LGLSAST
Sbjct: 357 MMVPPTRTSRSSCSW*RT*LGLSAST 434
Score = 105 bits (223), Expect = 5e-022
Identities = 46/69 (66%), Positives = 53/69 (76%)
Frame = +2 / +2
Query: 230 DEAAANGDAVGDGELTDLNALVRGEANVEVPDGGREPPVDVRHGRLRWHGHGPAPERVVV 409
D+AAA+GDAVGDGEL DL+A V GE VEVP+GG + V+V GR R H APERVVV
Sbjct: 176 DDAAADGDAVGDGELADLDARVGGELGVEVPEGGGKAGVEVGQGRARRQRHRAAPERVVV 355
Query: 410 HDGAADAHQ 436
+DGAADAHQ
Sbjct: 356 NDGAADAHQ 382
Score = 30.4 bits (60), Expect(2) = 5e-032
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = +2 / +2
Query: 548 QRGALAEVDLARHAGAL 598
Q GALAEV L RHAG L
Sbjct: 494 QAGALAEVHLVRHAGLL 544
>gb|CB878369.1|CB878369 HP08E22T HP Hordeum vulgare subsp. vulgare cDNA clone HP08E22
5-PRIME, mRNA sequence
Length = 581
Score = 223 bits (482), Expect = 6e-058
Identities = 91/124 (73%), Positives = 107/124 (86%)
Frame = -2 / +2
Query: 598 ERAGVAGKVDFREGPALGNLDELLADEANLGAFDFAFVDADKPNYFNYHEQLLRLVRVGG 419
E+AG+A KVDFREG L L+ELLA++ ++DFAFVDADKPNY YHEQLLRLVRVGG
Sbjct: 170 EKAGMAHKVDFREGTGLERLEELLAEDDGAASYDFAFVDADKPNYVRYHEQLLRLVRVGG 349
Query: 418 TIVYDNTLWCGTVAMPPETPMSDIDRRFSAAIRDLNVRLSADERVEVCQLAIADGVTICR 239
TI+YDNTLW GTVA+P TP+SD+D RFSAA+RDLN +L+AD R+EVCQLAIADGVTICR
Sbjct: 350 TIIYDNTLWGGTVALPAGTPLSDLDTRFSAALRDLNAKLAADPRIEVCQLAIADGVTICR 529
Query: 238 RLV* 227
R+V*
Sbjct: 530 RVV* 541
Score = 127 bits (271), Expect(2) = 5e-032
Identities = 63/86 (73%), Positives = 64/86 (74%)
Frame = +3 / -3
Query: 231 TRRRQMVTPSAMAS*QTSTRSSAERRTLRSLMAAENLLSMSDMGVSGGMATVPHQSVLSY 410
T RRQMVTPSAMAS QTS R SA LRSL AAE +S SD GV G ATVP QSVLS
Sbjct: 537 TTRRQMVTPSAMASWQTSMRGSAASLALRSLRAAEKRVSRSDKGVPAGSATVPPQSVLS* 358
Query: 411 TMVPPTRTRRSSCSW*LK*LGLSAST 488
MVPPTRT RSSCSW* *LGLSAST
Sbjct: 357 MMVPPTRTSRSSCSW*RT*LGLSAST 280
Score = 105 bits (225), Expect = 3e-022
Identities = 47/69 (68%), Positives = 52/69 (75%)
Frame = +2 / -2
Query: 230 DEAAANGDAVGDGELTDLNALVRGEANVEVPDGGREPPVDVRHGRLRWHGHGPAPERVVV 409
D+AAA+GDAVGDGEL DL+A V GE VEVP+GG E V+V GR R H APERVVV
Sbjct: 538 DDAAADGDAVGDGELADLDARVGGELGVEVPEGGGEAGVEVGQGRARRQRHRAAPERVVV 359
Query: 410 HDGAADAHQ 436
DGAADAHQ
Sbjct: 358 DDGAADAHQ 332
Score = 30.4 bits (60), Expect(2) = 5e-032
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = +2 / -2
Query: 548 QRGALAEVDLARHAGAL 598
Q GALAEV L RHAG L
Sbjct: 220 QAGALAEVHLVRHAGLL 170
>gb|BG300054.1|BG300054 HVSMEb0011D09f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0011D09f, mRNA sequence
Length = 518
Score = 219 bits (473), Expect = 1e-056
Identities = 90/124 (72%), Positives = 106/124 (85%)
Frame = -2 / +1
Query: 598 ERAGVAGKVDFREGPALGNLDELLADEANLGAFDFAFVDADKPNYFNYHEQLLRLVRVGG 419
E+AG+A KVDFREG L L+ELLA++ ++DFAFVDADKPNY YHEQLLRLVRVGG
Sbjct: 145 EKAGMAHKVDFREGTGLERLEELLAEDDGAASYDFAFVDADKPNYVRYHEQLLRLVRVGG 324
Query: 418 TIVYDNTLWCGTVAMPPETPMSDIDRRFSAAIRDLNVRLSADERVEVCQLAIADGVTICR 239
TI+YDNTLW GTVA+P TP+SD+D RFSAA+RDLN +L+AD R+EVCQLAIAD VTICR
Sbjct: 325 TIIYDNTLWGGTVALPAGTPLSDLDTRFSAALRDLNAKLAADPRIEVCQLAIADCVTICR 504
Query: 238 RLV* 227
R+V*
Sbjct: 505 RVV* 516
Score = 123 bits (263), Expect(2) = 6e-031
Identities = 62/86 (72%), Positives = 63/86 (73%)
Frame = +3 / -1
Query: 231 TRRRQMVTPSAMAS*QTSTRSSAERRTLRSLMAAENLLSMSDMGVSGGMATVPHQSVLSY 410
T RRQMVT SAMAS QTS R SA LRSL AAE +S SD GV G ATVP QSVLS
Sbjct: 512 TTRRQMVTQSAMASWQTSMRGSAASLALRSLRAAEKRVSRSDKGVPAGSATVPPQSVLS* 333
Query: 411 TMVPPTRTRRSSCSW*LK*LGLSAST 488
MVPPTRT RSSCSW* *LGLSAST
Sbjct: 332 MMVPPTRTSRSSCSW*RT*LGLSAST 255
Score = 105 bits (225), Expect = 3e-022
Identities = 47/69 (68%), Positives = 52/69 (75%)
Frame = +2 / -3
Query: 230 DEAAANGDAVGDGELTDLNALVRGEANVEVPDGGREPPVDVRHGRLRWHGHGPAPERVVV 409
D+AAA+GDAVGDGEL DL+A V GE VEVP+GG E V+V GR R H APERVVV
Sbjct: 513 DDAAADGDAVGDGELADLDARVGGELGVEVPEGGGEAGVEVGQGRARRQRHRAAPERVVV 334
Query: 410 HDGAADAHQ 436
DGAADAHQ
Sbjct: 333 DDGAADAHQ 307
Score = 30.4 bits (60), Expect(2) = 6e-031
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = +2 / -3
Query: 548 QRGALAEVDLARHAGAL 598
Q GALAEV L RHAG L
Sbjct: 195 QAGALAEVHLVRHAGLL 145
>gb|BI958431.1|BI958431 HVSMEn0014O22f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0014O22f, mRNA sequence
Length = 629
Score = 218 bits (470), Expect = 2e-056
Identities = 90/124 (72%), Positives = 106/124 (85%)
Frame = -2 / +2
Query: 598 ERAGVAGKVDFREGPALGNLDELLADEANLGAFDFAFVDADKPNYFNYHEQLLRLVRVGG 419
E+AG+A KVDFREG L L+ELLA++ ++DFAFVDADKPNY HEQLLRLVRVGG
Sbjct: 14 EKAGMAHKVDFREGTGLERLEELLAEDDGAASYDFAFVDADKPNYGRGHEQLLRLVRVGG 193
Query: 418 TIVYDNTLWCGTVAMPPETPMSDIDRRFSAAIRDLNVRLSADERVEVCQLAIADGVTICR 239
TI+YDNTLW GTVA+P TP+SD+D RFSAA+RDLN +L+AD R+EVCQLAIADGVTICR
Sbjct: 194 TIIYDNTLWGGTVALPAGTPLSDLDTRFSAALRDLNAKLAADPRIEVCQLAIADGVTICR 373
Query: 238 RLV* 227
R+V*
Sbjct: 374 RVV* 385
Score = 124 bits (266), Expect(2) = 2e-031
Identities = 62/86 (72%), Positives = 63/86 (73%)
Frame = +3 / -3
Query: 231 TRRRQMVTPSAMAS*QTSTRSSAERRTLRSLMAAENLLSMSDMGVSGGMATVPHQSVLSY 410
T RRQMVTPSAMAS QTS R SA LRSL AAE +S SD GV G ATVP QSVLS
Sbjct: 381 TTRRQMVTPSAMASWQTSMRGSAASLALRSLRAAEKRVSRSDKGVPAGSATVPPQSVLS* 202
Query: 411 TMVPPTRTRRSSCSW*LK*LGLSAST 488
MVPPTRT RSSCSW *LGLSAST
Sbjct: 201 MMVPPTRTSRSSCSWPRP*LGLSAST 124
Score = 105 bits (225), Expect = 3e-022
Identities = 47/69 (68%), Positives = 52/69 (75%)
Frame = +2 / -2
Query: 230 DEAAANGDAVGDGELTDLNALVRGEANVEVPDGGREPPVDVRHGRLRWHGHGPAPERVVV 409
D+AAA+GDAVGDGEL DL+A V GE VEVP+GG E V+V GR R H APERVVV
Sbjct: 382 DDAAADGDAVGDGELADLDARVGGELGVEVPEGGGEAGVEVGQGRARRQRHRAAPERVVV 203
Query: 410 HDGAADAHQ 436
DGAADAHQ
Sbjct: 202 DDGAADAHQ 176
Score = 30.4 bits (60), Expect(2) = 2e-031
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = +2 / -2
Query: 548 QRGALAEVDLARHAGAL 598
Q GALAEV L RHAG L
Sbjct: 64 QAGALAEVHLVRHAGLL 14
>gb|BI958752.1|BI958752 HVSMEn0016H12f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0016H12f, mRNA sequence
Length = 676
Score = 217 bits (469), Expect = 3e-056
Identities = 88/122 (72%), Positives = 104/122 (85%)
Frame = -2 / +2
Query: 598 ERAGVAGKVDFREGPALGNLDELLADEANLGAFDFAFVDADKPNYFNYHEQLLRLVRVGG 419
E+AG+A KVDFREG L L+ELLA++ ++DFAFVDADKPNY YHEQLLRLVRVGG
Sbjct: 104 EKAGMAHKVDFREGTGLERLEELLAEDDGAASYDFAFVDADKPNYVRYHEQLLRLVRVGG 283
Query: 418 TIVYDNTLWCGTVAMPPETPMSDIDRRFSAAIRDLNVRLSADERVEVCQLAIADGVTICR 239
TI+YDNTLW GTVA+P TP+SD+D RFSAA+RDLN +L+AD R+EVCQLAIAD VTICR
Sbjct: 284 TIIYDNTLWGGTVALPAGTPLSDLDTRFSAALRDLNAKLAADPRIEVCQLAIADRVTICR 463
Query: 238 RL 233
R+
Sbjct: 464 RV 469
Score = 121 bits (258), Expect(2) = 3e-030
Identities = 61/84 (72%), Positives = 62/84 (73%)
Frame = +3 / -2
Query: 237 RRQMVTPSAMAS*QTSTRSSAERRTLRSLMAAENLLSMSDMGVSGGMATVPHQSVLSYTM 416
RRQMVT SAMAS QTS R SA LRSL AAE +S SD GV G ATVP QSVLS M
Sbjct: 465 RRQMVTRSAMASWQTSMRGSAASLALRSLRAAEKRVSRSDKGVPAGSATVPPQSVLS*MM 286
Query: 417 VPPTRTRRSSCSW*LK*LGLSAST 488
VPPTRT RSSCSW* *LGLSAST
Sbjct: 285 VPPTRTSRSSCSW*RT*LGLSAST 214
Score = 101 bits (216), Expect = 4e-021
Identities = 45/69 (65%), Positives = 51/69 (73%)
Frame = +2 / -1
Query: 230 DEAAANGDAVGDGELTDLNALVRGEANVEVPDGGREPPVDVRHGRLRWHGHGPAPERVVV 409
++A A+GDAVGDGEL DL+A V GE VEVP+GG E V+V GR R H APERVVV
Sbjct: 472 EDAPADGDAVGDGELADLDARVGGELGVEVPEGGGEAGVEVGQGRARRQRHRAAPERVVV 293
Query: 410 HDGAADAHQ 436
DGAADAHQ
Sbjct: 292 DDGAADAHQ 266
Score = 30.4 bits (60), Expect(2) = 3e-030
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = +2 / -1
Query: 548 QRGALAEVDLARHAGAL 598
Q GALAEV L RHAG L
Sbjct: 154 QAGALAEVHLVRHAGLL 104
>gb|BE213939.2|BE213939 HV_CEb0001L07f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0001L07f, mRNA sequence
Length = 960
Score = 216 bits (467), Expect = 6e-056
Identities = 88/124 (70%), Positives = 104/124 (83%)
Frame = -2 / -3
Query: 598 ERAGVAGKVDFREGPALGNLDELLADEANLGAFDFAFVDADKPNYFNYHEQLLRLVRVGG 419
E+ G+A KVDFREGP L L+ELL ++ ++DFAFVDADKPNY YHEQLLRLVRVGG
Sbjct: 646 EKPGMAHKVDFREGPGLERLEELLPEDDGAASYDFAFVDADKPNYVRYHEQLLRLVRVGG 467
Query: 418 TIVYDNTLWCGTVAMPPETPMSDIDRRFSAAIRDLNVRLSADERVEVCQLAIADGVTICR 239
I+YDNTLW GTVA+P TP+SD+D RFSAA+RDLN +L+AD R+EVCQLAIADGVTIC
Sbjct: 466 PIIYDNTLWGGTVALPAGTPLSDLDTRFSAALRDLNAKLAADPRIEVCQLAIADGVTICP 287
Query: 238 RLV* 227
R+V*
Sbjct: 286 RVV* 275
Score = 121 bits (258), Expect(2) = 3e-029
Identities = 61/86 (70%), Positives = 62/86 (72%)
Frame = +3 / +3
Query: 231 TRRRQMVTPSAMAS*QTSTRSSAERRTLRSLMAAENLLSMSDMGVSGGMATVPHQSVLSY 410
T R QMVTPSAMAS QTS R SA LRSL AAE +S SD GV G ATVP QSVLS
Sbjct: 279 TTRGQMVTPSAMASWQTSMRGSAASLALRSLRAAEKRVSRSDKGVPAGSATVPPQSVLS* 458
Query: 411 TMVPPTRTRRSSCSW*LK*LGLSAST 488
M PPTRT RSSCSW* *LGLSAST
Sbjct: 459 MMGPPTRTNRSSCSW*RT*LGLSAST 536
Score = 27.2 bits (53), Expect(2) = 3e-029
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = +2 / +2
Query: 548 QRGALAEVDLARHAGAL 598
Q ALAEV L RHAG L
Sbjct: 596 QAXALAEVHLVRHAGLL 646
>gb|BF064997.3|BF064997 HV_CEb0022G03f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0022G03f, mRNA sequence
Length = 816
Score = 212 bits (458), Expect = 1e-054
Identities = 88/124 (70%), Positives = 102/124 (82%)
Frame = -2 / +2
Query: 598 ERAGVAGKVDFREGPALGNLDELLADEANLGAFDFAFVDADKPNYFNYHEQLLRLVRVGG 419
E+AG+A KVDFREG L L+ELLA++ ++DFAFVDADKPNY YHEQLLRLVRVGG
Sbjct: 407 EKAGMAHKVDFREGTGLERLEELLAEDDGAASYDFAFVDADKPNYVRYHEQLLRLVRVGG 586
Query: 418 TIVYDNTLWCGTVAMPPETPMSDIDRRFSAAIRDLNVRLSADERVEVCQLAIADGVTICR 239
TI+YDNTLW GTVA+P T +SD+D RFSAA+RDLN + D R EVCQLAIADGVTICR
Sbjct: 587 TIIYDNTLWGGTVALPAGTXLSDLDTRFSAALRDLNAKARXDPRXEVCQLAIADGVTICR 766
Query: 238 RLV* 227
R+V*
Sbjct: 767 RVV* 778
Score = 122 bits (261), Expect(2) = 1e-030
Identities = 61/86 (70%), Positives = 62/86 (72%)
Frame = +3 / -1
Query: 231 TRRRQMVTPSAMAS*QTSTRSSAERRTLRSLMAAENLLSMSDMGVSGGMATVPHQSVLSY 410
T RRQMVTPSAMAS QTS R S LRSL AAE +S SD V G ATVP QSVLS
Sbjct: 774 TTRRQMVTPSAMASWQTSMRGSXRALALRSLRAAEKRVSRSDKXVPAGSATVPPQSVLS* 595
Query: 411 TMVPPTRTRRSSCSW*LK*LGLSAST 488
MVPPTRT RSSCSW* *LGLSAST
Sbjct: 594 MMVPPTRTSRSSCSW*RT*LGLSAST 517
Score = 30.4 bits (60), Expect(2) = 1e-030
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = +2 / -3
Query: 548 QRGALAEVDLARHAGAL 598
Q GALAEV L RHAG L
Sbjct: 457 QAGALAEVHLVRHAGLL 407
>gb|BJ464739.1|BJ464739 BJ464739 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags37h18 5', mRNA sequence
Length = 573
Score = 207 bits (447), Expect = 4e-053
Identities = 84/114 (73%), Positives = 98/114 (85%)
Frame = -2 / +2
Query: 568 FREGPALGNLDELLADEANLGAFDFAFVDADKPNYFNYHEQLLRLVRVGGTIVYDNTLWC 389
FREG L L+ELLA++ ++DFAFVDADKPNY YHEQLLRLVRVGGTI+YDNTLW
Sbjct: 26 FREGTGLERLEELLAEDDGAASYDFAFVDADKPNYVRYHEQLLRLVRVGGTIIYDNTLWG 205
Query: 388 GTVAMPPETPMSDIDRRFSAAIRDLNVRLSADERVEVCQLAIADGVTICRRLV* 227
GTVA+P TP+SD+D RFSAA+RDLN +L+AD R+EVCQLAIADGVTICRR+V*
Sbjct: 206 GTVALPAGTPLSDLDTRFSAALRDLNAKLAADPRIEVCQLAIADGVTICRRVV* 367
Score = 127 bits (271), Expect = 7e-029
Identities = 63/86 (73%), Positives = 64/86 (74%)
Frame = +3 / -1
Query: 231 TRRRQMVTPSAMAS*QTSTRSSAERRTLRSLMAAENLLSMSDMGVSGGMATVPHQSVLSY 410
T RRQMVTPSAMAS QTS R SA LRSL AAE +S SD GV G ATVP QSVLS
Sbjct: 363 TTRRQMVTPSAMASWQTSMRGSAASLALRSLRAAEKRVSRSDKGVPAGSATVPPQSVLS* 184
Query: 411 TMVPPTRTRRSSCSW*LK*LGLSAST 488
MVPPTRT RSSCSW* *LGLSAST
Sbjct: 183 MMVPPTRTSRSSCSW*RT*LGLSAST 106
Score = 105 bits (225), Expect = 3e-022
Identities = 47/69 (68%), Positives = 52/69 (75%)
Frame = +2 / -3
Query: 230 DEAAANGDAVGDGELTDLNALVRGEANVEVPDGGREPPVDVRHGRLRWHGHGPAPERVVV 409
D+AAA+GDAVGDGEL DL+A V GE VEVP+GG E V+V GR R H APERVVV
Sbjct: 364 DDAAADGDAVGDGELADLDARVGGELGVEVPEGGGEAGVEVGQGRARRQRHRAAPERVVV 185
Query: 410 HDGAADAHQ 436
DGAADAHQ
Sbjct: 184 DDGAADAHQ 158
>gb|BI779178.2|BI779178 EBro01_SQ003_D18_R root, 3 week, hydroponic grown, no treatment, cv
Optic, EBro01 Hordeum vulgare subsp. vulgare cDNA clone
EBro01_SQ003_D18 5', mRNA sequence
Length = 540
Score = 203 bits (437), Expect = 9e-052
Identities = 82/118 (69%), Positives = 96/118 (81%)
Frame = -2 / +1
Query: 595 RAGVAGKVDFREGPALGNLDELLADEANLGAFDFAFVDADKPNYFNYHEQLLRLVRVGGT 416
R G+A K DFREG L L+ELLA++ ++DFAFVDADKPNY YHEQLLRLVRVGGT
Sbjct: 187 RRGMAHKGDFREGTGLERLEELLAEDDGAASYDFAFVDADKPNYVRYHEQLLRLVRVGGT 366
Query: 415 IVYDNTLWCGTVAMPPETPMSDIDRRFSAAIRDLNVRLSADERVEVCQLAIADGVTIC 242
I+YDNTLW GTVA+P TP+SD+D RFS +RDLN +L+AD R+E CQLAIADGVTIC
Sbjct: 367 IIYDNTLWGGTVALPAGTPLSDLDTRFSGGLRDLNAKLAADPRIEGCQLAIADGVTIC 540
Score = 113 bits (241), Expect(2) = 1e-026
Identities = 57/82 (69%), Positives = 58/82 (70%)
Frame = +3 / -2
Query: 243 QMVTPSAMAS*QTSTRSSAERRTLRSLMAAENLLSMSDMGVSGGMATVPHQSVLSYTMVP 422
QMVTPSAMAS Q S R SA LRSL E +S SD GV G ATVP QSVLS MVP
Sbjct: 539 QMVTPSAMASWQPSMRGSAASLALRSLRPPEKRVSRSDKGVPAGSATVPPQSVLS*MMVP 360
Query: 423 PTRTRRSSCSW*LK*LGLSAST 488
PTRT RSSCSW* *LGLSAST
Sbjct: 359 PTRTSRSSCSW*RT*LGLSAST 294
Score = 26.3 bits (51), Expect(2) = 1e-026
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = +2 / -1
Query: 548 QRGALAEVDLARHA 589
Q GALAEV L RHA
Sbjct: 234 QAGALAEVPLVRHA 193
>gb|BF257218.2|BF257218 HVSMEf0012D15f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0012D15f, mRNA sequence
Length = 830
Score = 198 bits (426), Expect = 3e-050
Identities = 80/108 (74%), Positives = 94/108 (87%)
Frame = -2 / +3
Query: 550 LGNLDELLADEANLGAFDFAFVDADKPNYFNYHEQLLRLVRVGGTIVYDNTLWCGTVAMP 371
L L+ELLA++ ++DFAFVDADKPNY YHEQLLRLVRVGGTI+YDNTLW GTVA+P
Sbjct: 6 LERLEELLAEDDGAASYDFAFVDADKPNYVRYHEQLLRLVRVGGTIIYDNTLWGGTVALP 185
Query: 370 PETPMSDIDRRFSAAIRDLNVRLSADERVEVCQLAIADGVTICRRLV* 227
TP+SD+D RFSAA+RDLN +L+AD R+EVCQLAIADGVTICRR+V*
Sbjct: 186 AGTPLSDLDTRFSAALRDLNAKLAADPRIEVCQLAIADGVTICRRVV* 329
Score = 127 bits (271), Expect = 7e-029
Identities = 63/86 (73%), Positives = 64/86 (74%)
Frame = +3 / -2
Query: 231 TRRRQMVTPSAMAS*QTSTRSSAERRTLRSLMAAENLLSMSDMGVSGGMATVPHQSVLSY 410
T RRQMVTPSAMAS QTS R SA LRSL AAE +S SD GV G ATVP QSVLS
Sbjct: 325 TTRRQMVTPSAMASWQTSMRGSAASLALRSLRAAEKRVSRSDKGVPAGSATVPPQSVLS* 146
Query: 411 TMVPPTRTRRSSCSW*LK*LGLSAST 488
MVPPTRT RSSCSW* *LGLSAST
Sbjct: 145 MMVPPTRTSRSSCSW*RT*LGLSAST 68
Score = 105 bits (225), Expect = 3e-022
Identities = 47/69 (68%), Positives = 52/69 (75%)
Frame = +2 / -1
Query: 230 DEAAANGDAVGDGELTDLNALVRGEANVEVPDGGREPPVDVRHGRLRWHGHGPAPERVVV 409
D+AAA+GDAVGDGEL DL+A V GE VEVP+GG E V+V GR R H APERVVV
Sbjct: 326 DDAAADGDAVGDGELADLDARVGGELGVEVPEGGGEAGVEVGQGRARRQRHRAAPERVVV 147
Query: 410 HDGAADAHQ 436
DGAADAHQ
Sbjct: 146 DDGAADAHQ 120
>gb|BE558675.1|BE558675 HV_CEb0020A16f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0020A16f, mRNA sequence
Length = 816
Score = 198 bits (426), Expect = 3e-050
Identities = 80/108 (74%), Positives = 94/108 (87%)
Frame = -2 / -3
Query: 550 LGNLDELLADEANLGAFDFAFVDADKPNYFNYHEQLLRLVRVGGTIVYDNTLWCGTVAMP 371
L L+ELLA++ ++DFAFVDADKPNY YHEQLLRLVRVGGTI+YDNTLW GTVA+P
Sbjct: 598 LERLEELLAEDDGAASYDFAFVDADKPNYVRYHEQLLRLVRVGGTIIYDNTLWGGTVALP 419
Query: 370 PETPMSDIDRRFSAAIRDLNVRLSADERVEVCQLAIADGVTICRRLV* 227
TP+SD+D RFSAA+RDLN +L+AD R+EVCQLAIADGVTICRR+V*
Sbjct: 418 AGTPLSDLDTRFSAALRDLNAKLAADPRIEVCQLAIADGVTICRRVV* 275
Score = 127 bits (271), Expect = 7e-029
Identities = 63/86 (73%), Positives = 64/86 (74%)
Frame = +3 / +3
Query: 231 TRRRQMVTPSAMAS*QTSTRSSAERRTLRSLMAAENLLSMSDMGVSGGMATVPHQSVLSY 410
T RRQMVTPSAMAS QTS R SA LRSL AAE +S SD GV G ATVP QSVLS
Sbjct: 279 TTRRQMVTPSAMASWQTSMRGSAASLALRSLRAAEKRVSRSDKGVPAGSATVPPQSVLS* 458
Query: 411 TMVPPTRTRRSSCSW*LK*LGLSAST 488
MVPPTRT RSSCSW* *LGLSAST
Sbjct: 459 MMVPPTRTSRSSCSW*RT*LGLSAST 536
Score = 104 bits (221), Expect = 9e-022
Identities = 46/69 (66%), Positives = 52/69 (75%)
Frame = +2 / +2
Query: 230 DEAAANGDAVGDGELTDLNALVRGEANVEVPDGGREPPVDVRHGRLRWHGHGPAPERVVV 409
D+AAA+GDAVGDGEL DL+A V GE VEVP+GG + V+V GR R H APERVVV
Sbjct: 278 DDAAADGDAVGDGELADLDARVGGELGVEVPEGGGKAGVEVGQGRARRQRHRAAPERVVV 457
Query: 410 HDGAADAHQ 436
DGAADAHQ
Sbjct: 458 DDGAADAHQ 484
>gb|CB878414.1|CB878414 HP08H09T HP Hordeum vulgare subsp. vulgare cDNA clone HP08H09
5-PRIME, mRNA sequence
Length = 478
Score = 188 bits (405), Expect = 2e-047
Identities = 75/100 (75%), Positives = 88/100 (88%)
Frame = -2 / +1
Query: 526 ADEANLGAFDFAFVDADKPNYFNYHEQLLRLVRVGGTIVYDNTLWCGTVAMPPETPMSDI 347
A++ ++DFAFVDADKPNY YHEQLLRLVRVGGTI+YDNTLW GTVA+P TP+SD+
Sbjct: 10 AEDDGAASYDFAFVDADKPNYVRYHEQLLRLVRVGGTIIYDNTLWGGTVALPAGTPLSDL 189
Query: 346 DRRFSAAIRDLNVRLSADERVEVCQLAIADGVTICRRLV* 227
D RFSAA+RDLN +L+AD R+EVCQLAIADGVTICRR+V*
Sbjct: 190 DTRFSAALRDLNAKLAADPRIEVCQLAIADGVTICRRVV* 309
Score = 127 bits (271), Expect = 7e-029
Identities = 63/86 (73%), Positives = 64/86 (74%)
Frame = +3 / -3
Query: 231 TRRRQMVTPSAMAS*QTSTRSSAERRTLRSLMAAENLLSMSDMGVSGGMATVPHQSVLSY 410
T RRQMVTPSAMAS QTS R SA LRSL AAE +S SD GV G ATVP QSVLS
Sbjct: 305 TTRRQMVTPSAMASWQTSMRGSAASLALRSLRAAEKRVSRSDKGVPAGSATVPPQSVLS* 126
Query: 411 TMVPPTRTRRSSCSW*LK*LGLSAST 488
MVPPTRT RSSCSW* *LGLSAST
Sbjct: 125 MMVPPTRTSRSSCSW*RT*LGLSAST 48
Score = 105 bits (225), Expect = 3e-022
Identities = 47/69 (68%), Positives = 52/69 (75%)
Frame = +2 / -2
Query: 230 DEAAANGDAVGDGELTDLNALVRGEANVEVPDGGREPPVDVRHGRLRWHGHGPAPERVVV 409
D+AAA+GDAVGDGEL DL+A V GE VEVP+GG E V+V GR R H APERVVV
Sbjct: 306 DDAAADGDAVGDGELADLDARVGGELGVEVPEGGGEAGVEVGQGRARRQRHRAAPERVVV 127
Query: 410 HDGAADAHQ 436
DGAADAHQ
Sbjct: 126 DDGAADAHQ 100
>gb|BF259495.2|BF259495 HVSMEf0019H19f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0019H19f, mRNA sequence
Length = 759
Score = 187 bits (402), Expect = 6e-047
Identities = 74/121 (61%), Positives = 92/121 (76%)
Frame = -2 / +1
Query: 598 ERAGVAGKVDFREGPALGNLDELLADEANLGAFDFAFVDADKPNYFNYHEQLLRLVRVGG 419
E+AGVA K+DFREGPAL LD LL DEAN G FDF FVDADK NY NYHE+L++LV+VGG
Sbjct: 235 EKAGVAHKIDFREGPALPVLDALLEDEANHGTFDFVFVDADKDNYLNYHERLMKLVKVGG 414
Query: 418 TIVYDNTLWCGTVAMPPETPMSDIDRRFSAAIRDLNVRLSADERVEVCQLAIADGVTICR 239
+ YDNTLW G+V +P + PM R + + DLN L+AD+RVE+CQL + DG+T+CR
Sbjct: 415 LLGYDNTLWNGSVVLPADAPMRKYIRYYRDFVLDLNKALAADQRVEICQLPVGDGITLCR 594
Query: 238 R 236
R
Sbjct: 595 R 597
>gb|BI960118.1|BI960118 HVSMEn0023E18f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0023E18f, mRNA sequence
Length = 637
Score = 187 bits (402), Expect = 6e-047
Identities = 74/121 (61%), Positives = 92/121 (76%)
Frame = -2 / +2
Query: 598 ERAGVAGKVDFREGPALGNLDELLADEANLGAFDFAFVDADKPNYFNYHEQLLRLVRVGG 419
E+AGVA K+DFREGPAL LD LL DEAN G FDF FVDADK NY NYHE+L++LV+VGG
Sbjct: 173 EKAGVAHKIDFREGPALPVLDALLEDEANHGTFDFVFVDADKDNYLNYHERLMKLVKVGG 352
Query: 418 TIVYDNTLWCGTVAMPPETPMSDIDRRFSAAIRDLNVRLSADERVEVCQLAIADGVTICR 239
+ YDNTLW G+V +P + PM R + + DLN L+AD+RVE+CQL + DG+T+CR
Sbjct: 353 LLGYDNTLWNGSVVLPADAPMRKYIRYYRDFVLDLNKALAADQRVEICQLPVGDGITLCR 532
Query: 238 R 236
R
Sbjct: 533 R 535
>gb|BI960325.1|BI960325 HVSMEn0024D19f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0024D19f, mRNA sequence
Length = 591
Score = 187 bits (402), Expect = 6e-047
Identities = 74/121 (61%), Positives = 92/121 (76%)
Frame = -2 / +1
Query: 598 ERAGVAGKVDFREGPALGNLDELLADEANLGAFDFAFVDADKPNYFNYHEQLLRLVRVGG 419
E+AGVA K+DFREGPAL LD LL DEAN G FDF FVDADK NY NYHE+L++LV+VGG
Sbjct: 13 EKAGVAHKIDFREGPALPVLDALLEDEANHGTFDFVFVDADKDNYLNYHERLMKLVKVGG 192
Query: 418 TIVYDNTLWCGTVAMPPETPMSDIDRRFSAAIRDLNVRLSADERVEVCQLAIADGVTICR 239
+ YDNTLW G+V +P + PM R + + DLN L+AD+RVE+CQL + DG+T+CR
Sbjct: 193 LLGYDNTLWNGSVVLPADAPMRKYIRYYRDFVLDLNKALAADQRVEICQLPVGDGITLCR 372
Query: 238 R 236
R
Sbjct: 373 R 375
>gb|BU979082.1|BU979082 HA15B18r HA Hordeum vulgare subsp. vulgare cDNA clone HA15B18
5-PRIME, mRNA sequence
Length = 593
Score = 187 bits (402), Expect = 6e-047
Identities = 74/121 (61%), Positives = 92/121 (76%)
Frame = -2 / +2
Query: 598 ERAGVAGKVDFREGPALGNLDELLADEANLGAFDFAFVDADKPNYFNYHEQLLRLVRVGG 419
E+AGVA K+DFREGPAL LD LL DEAN G FDF FVDADK NY NYHE+L++LV+VGG
Sbjct: 23 EKAGVAHKIDFREGPALPVLDALLEDEANHGTFDFVFVDADKDNYLNYHERLMKLVKVGG 202
Query: 418 TIVYDNTLWCGTVAMPPETPMSDIDRRFSAAIRDLNVRLSADERVEVCQLAIADGVTICR 239
+ YDNTLW G+V +P + PM R + + DLN L+AD+RVE+CQL + DG+T+CR
Sbjct: 203 LLGYDNTLWNGSVVLPADAPMRKYIRYYRDFVLDLNKALAADQRVEICQLPVGDGITLCR 382
Query: 238 R 236
R
Sbjct: 383 R 385
>gb|BU979265.1|BU979265 HA15J22r HA Hordeum vulgare subsp. vulgare cDNA clone HA15J22
5-PRIME, mRNA sequence
Length = 507
Score = 187 bits (402), Expect = 6e-047
Identities = 74/121 (61%), Positives = 92/121 (76%)
Frame = -2 / +2
Query: 598 ERAGVAGKVDFREGPALGNLDELLADEANLGAFDFAFVDADKPNYFNYHEQLLRLVRVGG 419
E+AGVA K+DFREGPAL LD LL DEAN G FDF FVDADK NY NYHE+L++LV+VGG
Sbjct: 23 EKAGVAHKIDFREGPALPVLDALLEDEANHGTFDFVFVDADKDNYLNYHERLMKLVKVGG 202
Query: 418 TIVYDNTLWCGTVAMPPETPMSDIDRRFSAAIRDLNVRLSADERVEVCQLAIADGVTICR 239
+ YDNTLW G+V +P + PM R + + DLN L+AD+RVE+CQL + DG+T+CR
Sbjct: 203 LLGYDNTLWNGSVVLPADAPMRKYIRYYRDFVLDLNKALAADQRVEICQLPVGDGITLCR 382
Query: 238 R 236
R
Sbjct: 383 R 385
>gb|CA030887.1|CA030887 HX08G19r HX Hordeum vulgare subsp. vulgare cDNA clone HX08G19
5-PRIME, mRNA sequence
Length = 577
Score = 187 bits (402), Expect = 6e-047
Identities = 74/121 (61%), Positives = 92/121 (76%)
Frame = -2 / -3
Query: 598 ERAGVAGKVDFREGPALGNLDELLADEANLGAFDFAFVDADKPNYFNYHEQLLRLVRVGG 419
E+AGVA K+DFREGPAL LD LL DEAN G FDF FVDADK NY NYHE+L++LV+VGG
Sbjct: 554 EKAGVAHKIDFREGPALPVLDALLEDEANHGTFDFVFVDADKDNYLNYHERLMKLVKVGG 375
Query: 418 TIVYDNTLWCGTVAMPPETPMSDIDRRFSAAIRDLNVRLSADERVEVCQLAIADGVTICR 239
+ YDNTLW G+V +P + PM R + + DLN L+AD+RVE+CQL + DG+T+CR
Sbjct: 374 LLGYDNTLWNGSVVLPADAPMRKYIRYYRDFVLDLNKALAADQRVEICQLPVGDGITLCR 195
Query: 238 R 236
R
Sbjct: 194 R 192
>gb|CB859935.1|CB859935 HI12A22w HI Hordeum vulgare subsp. vulgare cDNA clone HI12A22
3-PRIME, mRNA sequence
Length = 549
Score = 187 bits (402), Expect = 6e-047
Identities = 74/121 (61%), Positives = 92/121 (76%)
Frame = -2 / -2
Query: 598 ERAGVAGKVDFREGPALGNLDELLADEANLGAFDFAFVDADKPNYFNYHEQLLRLVRVGG 419
E+AGVA K+DFREGPAL LD LL DEAN G FDF FVDADK NY NYHE+L++LV+VGG
Sbjct: 536 EKAGVAHKIDFREGPALPVLDALLEDEANHGTFDFVFVDADKDNYLNYHERLMKLVKVGG 357
Query: 418 TIVYDNTLWCGTVAMPPETPMSDIDRRFSAAIRDLNVRLSADERVEVCQLAIADGVTICR 239
+ YDNTLW G+V +P + PM R + + DLN L+AD+RVE+CQL + DG+T+CR
Sbjct: 356 LLGYDNTLWNGSVVLPADAPMRKYIRYYRDFVLDLNKALAADQRVEICQLPVGDGITLCR 177
Query: 238 R 236
R
Sbjct: 176 R 174
>gb|CB859954.1|CB859954 HI12C04w HI Hordeum vulgare subsp. vulgare cDNA clone HI12C04
3-PRIME, mRNA sequence
Length = 552
Score = 187 bits (402), Expect = 6e-047
Identities = 74/121 (61%), Positives = 92/121 (76%)
Frame = -2 / -1
Query: 598 ERAGVAGKVDFREGPALGNLDELLADEANLGAFDFAFVDADKPNYFNYHEQLLRLVRVGG 419
E+AGVA K+DFREGPAL LD LL DEAN G FDF FVDADK NY NYHE+L++LV+VGG
Sbjct: 534 EKAGVAHKIDFREGPALPVLDALLEDEANHGTFDFVFVDADKDNYLNYHERLMKLVKVGG 355
Query: 418 TIVYDNTLWCGTVAMPPETPMSDIDRRFSAAIRDLNVRLSADERVEVCQLAIADGVTICR 239
+ YDNTLW G+V +P + PM R + + DLN L+AD+RVE+CQL + DG+T+CR
Sbjct: 354 LLGYDNTLWNGSVVLPADAPMRKYIRYYRDFVLDLNKALAADQRVEICQLPVGDGITLCR 175
Query: 238 R 236
R
Sbjct: 174 R 172
>gb|BI958437.1|BI958437 HVSMEn0014P16f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0014P16f, mRNA sequence
Length = 660
Score = 186 bits (401), Expect = 8e-047
Identities = 74/99 (74%), Positives = 87/99 (87%)
Frame = -2 / -1
Query: 523 DEANLGAFDFAFVDADKPNYFNYHEQLLRLVRVGGTIVYDNTLWCGTVAMPPETPMSDID 344
++ ++DFAFVDADKPNY YHEQLLRLVRVGGTI+YDNTLW GTVA+P TP+SD+D
Sbjct: 555 EDDGAASYDFAFVDADKPNYVRYHEQLLRLVRVGGTIIYDNTLWGGTVALPAGTPLSDLD 376
Query: 343 RRFSAAIRDLNVRLSADERVEVCQLAIADGVTICRRLV* 227
RFSAA+RDLN +L+AD R+EVCQLAIADGVTICRR+V*
Sbjct: 375 TRFSAALRDLNAKLAADPRIEVCQLAIADGVTICRRVV* 259
Score = 127 bits (271), Expect(2) = 6e-031
Identities = 63/86 (73%), Positives = 64/86 (74%)
Frame = +3 / +2
Query: 231 TRRRQMVTPSAMAS*QTSTRSSAERRTLRSLMAAENLLSMSDMGVSGGMATVPHQSVLSY 410
T RRQMVTPSAMAS QTS R SA LRSL AAE +S SD GV G ATVP QSVLS
Sbjct: 263 TTRRQMVTPSAMASWQTSMRGSAASLALRSLRAAEKRVSRSDKGVPAGSATVPPQSVLS* 442
Query: 411 TMVPPTRTRRSSCSW*LK*LGLSAST 488
MVPPTRT RSSCSW* *LGLSAST
Sbjct: 443 MMVPPTRTSRSSCSW*RT*LGLSAST 520
Score = 105 bits (225), Expect = 3e-022
Identities = 47/69 (68%), Positives = 52/69 (75%)
Frame = +2 / +1
Query: 230 DEAAANGDAVGDGELTDLNALVRGEANVEVPDGGREPPVDVRHGRLRWHGHGPAPERVVV 409
D+AAA+GDAVGDGEL DL+A V GE VEVP+GG E V+V GR R H APERVVV
Sbjct: 262 DDAAADGDAVGDGELADLDARVGGELGVEVPEGGGEAGVEVGQGRARRQRHRAAPERVVV 441
Query: 410 HDGAADAHQ 436
DGAADAHQ
Sbjct: 442 DDGAADAHQ 468
Score = 26.7 bits (52), Expect(2) = 6e-031
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +2 / +3
Query: 545 AQRGALAEVDLARHAGAL 598
++ GAL EV L RHAG L
Sbjct: 579 SRAGALREVHLGRHAGLL 632
>gb|BF626523.2|BF626523 HVSMEa0018K06f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0018K06f, mRNA sequence
Length = 749
Score = 186 bits (400), Expect = 1e-046
Identities = 75/110 (68%), Positives = 90/110 (81%)
Frame = -2 / +3
Query: 598 ERAGVAGKVDFREGPALGNLDELLADEANLGAFDFAFVDADKPNYFNYHEQLLRLVRVGG 419
E+AG+A KVDFREG L L+ELLA++ ++DFAFVDADKPNY YHEQLLRLVRVGG
Sbjct: 420 EKAGMAHKVDFREGTGLERLEELLAEDDGAASYDFAFVDADKPNYVRYHEQLLRLVRVGG 599
Query: 418 TIVYDNTLWCGTVAMPPETPMSDIDRRFSAAIRDLNVRLSADERVEVCQL 269
TI+YDNTLW GTVA+P TP+SD+D RF A +RDLN +L+AD +EVCQL
Sbjct: 600 TIIYDNTLWGGTVALPAGTPLSDLDTRFFAGLRDLNAKLAADPCMEVCQL 749
Score = 92.7 bits (196), Expect(2) = 8e-022
Identities = 46/71 (64%), Positives = 48/71 (67%)
Frame = +3 / -2
Query: 276 QTSTRSSAERRTLRSLMAAENLLSMSDMGVSGGMATVPHQSVLSYTMVPPTRTRRSSCSW 455
QTS SA RSL A+ +S SD GV G ATVP QSVLS MVPPTRT RSSCSW
Sbjct: 742 QTSMHGSAASLAFRSLRPAKKRVSRSDKGVPAGSATVPPQSVLS*MMVPPTRTSRSSCSW 563
Query: 456 *LK*LGLSAST 488
* *LGLSAST
Sbjct: 562 *RT*LGLSAST 530
Score = 30.4 bits (60), Expect(2) = 8e-022
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = +2 / -1
Query: 548 QRGALAEVDLARHAGAL 598
Q GALAEV L RHAG L
Sbjct: 470 QAGALAEVHLVRHAGLL 420
>gb|BI957613.1|BI957613 HVSMEn0010F23f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0010F23f, mRNA sequence
Length = 654
Score = 180 bits (388), Expect(2) = 1e-046
Identities = 72/106 (67%), Positives = 87/106 (82%)
Frame = -2 / +3
Query: 598 ERAGVAGKVDFREGPALGNLDELLADEANLGAFDFAFVDADKPNYFNYHEQLLRLVRVGG 419
E+AG+A DFREG L L+ELLA++ ++DFAFVDADKPNY YHEQLLRLVRVGG
Sbjct: 216 EKAGMAHTADFREGTGLERLEELLAEDDGAASYDFAFVDADKPNYVRYHEQLLRLVRVGG 395
Query: 418 TIVYDNTLWCGTVAMPPETPMSDIDRRFSAAIRDLNVRLSADERVE 281
TI+YDNTLW GTVA+P TP+SD+D RFSAA+RDLN +L+AD R+E
Sbjct: 396 TIIYDNTLWGGTVALPAGTPLSDLDTRFSAALRDLNAKLAADPRIE 533
Score = 96.4 bits (204), Expect(3) = 2e-023
Identities = 48/69 (69%), Positives = 49/69 (71%)
Frame = +3 / -3
Query: 282 STRSSAERRTLRSLMAAENLLSMSDMGVSGGMATVPHQSVLSYTMVPPTRTRRSSCSW*L 461
S R SA LRSL AAE +S SD GV G ATVP QSVLS MVPPTRT RSSCSW*
Sbjct: 532 SMRGSAASLALRSLSAAEKRVSRSDKGVPAGSATVPPQSVLS*MMVPPTRTSRSSCSW*R 353
Query: 462 K*LGLSAST 488
*LGLSAST
Sbjct: 352 T*LGLSAST 326
Score = 26.3 bits (51), Expect(3) = 2e-023
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = +2 / -2
Query: 548 QRGALAEVDLARHAGAL 598
Q GALAEV RHAG L
Sbjct: 266 QAGALAEVRGVRHAGLL 216
Score = 25.4 bits (49), Expect(2) = 1e-046
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = -2 / +1
Query: 280 VCQLAIADGVTICR 239
VC LAIA+GVT+ R
Sbjct: 535 VCDLAIANGVTMFR 576
Score = 23.5 bits (45), Expect(3) = 2e-023
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = +2 / -1
Query: 239 AANGDAVGDGELTD 280
A +GD VGDG++ D
Sbjct: 576 AEHGDPVGDGKVAD 535
>gb|BF254858.3|BF254858 HVSMEf0005D24f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0005D24f, mRNA sequence
Length = 541
Score = 182 bits (393), Expect = 1e-045
Identities = 73/91 (80%), Positives = 83/91 (91%)
Frame = -2 / +2
Query: 499 DFAFVDADKPNYFNYHEQLLRLVRVGGTIVYDNTLWCGTVAMPPETPMSDIDRRFSAAIR 320
DFAFVDADKPNY YHEQLLR+VRVGGTI+YDNTLW GTVA+P TP+SD+D RFSAA+R
Sbjct: 2 DFAFVDADKPNYVRYHEQLLRVVRVGGTIIYDNTLWGGTVALPAGTPLSDLDTRFSAALR 181
Query: 319 DLNVRLSADERVEVCQLAIADGVTICRRLV* 227
DLN +L+AD R+EVCQLAIADGVTICRR+V*
Sbjct: 182 DLNAKLAADPRIEVCQLAIADGVTICRRVV* 274
Score = 127 bits (271), Expect = 7e-029
Identities = 63/86 (73%), Positives = 64/86 (74%)
Frame = +3 / -2
Query: 231 TRRRQMVTPSAMAS*QTSTRSSAERRTLRSLMAAENLLSMSDMGVSGGMATVPHQSVLSY 410
T RRQMVTPSAMAS QTS R SA LRSL AAE +S SD GV G ATVP QSVLS
Sbjct: 270 TTRRQMVTPSAMASWQTSMRGSAASLALRSLRAAEKRVSRSDKGVPAGSATVPPQSVLS* 91
Query: 411 TMVPPTRTRRSSCSW*LK*LGLSAST 488
MVPPTRT RSSCSW* *LGLSAST
Sbjct: 90 MMVPPTRTTRSSCSW*RT*LGLSAST 13
Score = 103 bits (220), Expect = 1e-021
Identities = 46/68 (67%), Positives = 51/68 (75%)
Frame = +2 / -1
Query: 230 DEAAANGDAVGDGELTDLNALVRGEANVEVPDGGREPPVDVRHGRLRWHGHGPAPERVVV 409
D+AAA+GDAVGDGEL DL+A V GE VEVP+GG E V+V GR R H APERVVV
Sbjct: 271 DDAAADGDAVGDGELADLDARVGGELGVEVPEGGGEAGVEVGQGRARRQRHRAAPERVVV 92
Query: 410 HDGAADAH 433
DGAADAH
Sbjct: 91 DDGAADAH 68
>gb|CA016746.1|CA016746 HV06J09u HV Hordeum vulgare subsp. vulgare cDNA clone HV06J09
3-PRIME, mRNA sequence
Length = 496
Score = 178 bits (384), Expect = 2e-044
Identities = 72/89 (80%), Positives = 81/89 (91%)
Frame = -2 / -1
Query: 493 AFVDADKPNYFNYHEQLLRLVRVGGTIVYDNTLWCGTVAMPPETPMSDIDRRFSAAIRDL 314
AFVDADKPNY YHEQLLRLVRVGGTI+YDNTLW GTVA+P TP+SD+D RFSAA+RDL
Sbjct: 496 AFVDADKPNYVRYHEQLLRLVRVGGTIIYDNTLWGGTVALPAGTPLSDLDTRFSAALRDL 317
Query: 313 NVRLSADERVEVCQLAIADGVTICRRLV* 227
N +L+AD R+EVCQLAIADGVTICRR+V*
Sbjct: 316 NAKLAADPRIEVCQLAIADGVTICRRVV* 230
Score = 127 bits (271), Expect = 7e-029
Identities = 63/86 (73%), Positives = 64/86 (74%)
Frame = +3 / +3
Query: 231 TRRRQMVTPSAMAS*QTSTRSSAERRTLRSLMAAENLLSMSDMGVSGGMATVPHQSVLSY 410
T RRQMVTPSAMAS QTS R SA LRSL AAE +S SD GV G ATVP QSVLS
Sbjct: 234 TTRRQMVTPSAMASWQTSMRGSAASLALRSLRAAEKRVSRSDKGVPAGSATVPPQSVLS* 413
Query: 411 TMVPPTRTRRSSCSW*LK*LGLSAST 488
MVPPTRT RSSCSW* *LGLSAST
Sbjct: 414 MMVPPTRTSRSSCSW*RT*LGLSAST 491
Score = 106 bits (227), Expect = 1e-022
Identities = 47/69 (68%), Positives = 53/69 (76%)
Frame = +2 / +2
Query: 230 DEAAANGDAVGDGELTDLNALVRGEANVEVPDGGREPPVDVRHGRLRWHGHGPAPERVVV 409
D+AAA+GDAVGDGEL DL+A V GE VEVP+GG E V+V GR R H APERVVV
Sbjct: 233 DDAAADGDAVGDGELADLDARVGGELGVEVPEGGGEAGVEVGQGRARRQRHRAAPERVVV 412
Query: 410 HDGAADAHQ 436
+DGAADAHQ
Sbjct: 413 NDGAADAHQ 439
>gb|BI960058.1|BI960058 HVSMEn0023A12f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0023A12f, mRNA sequence
Length = 639
Score = 175 bits (377), Expect = 2e-043
Identities = 71/89 (79%), Positives = 80/89 (89%)
Frame = -2 / -3
Query: 493 AFVDADKPNYFNYHEQLLRLVRVGGTIVYDNTLWCGTVAMPPETPMSDIDRRFSAAIRDL 314
A VDADKPNY YHEQLLRLVRVGGTI+YDNTLW GTVA+P TP+SD+D RFSAA+RDL
Sbjct: 529 AVVDADKPNYVRYHEQLLRLVRVGGTIIYDNTLWGGTVALPAGTPLSDLDTRFSAALRDL 350
Query: 313 NVRLSADERVEVCQLAIADGVTICRRLV* 227
N +L+AD R+EVCQLAIADGVTICRR+V*
Sbjct: 349 NAKLAADPRIEVCQLAIADGVTICRRVV* 263
Score = 127 bits (271), Expect = 7e-029
Identities = 63/86 (73%), Positives = 64/86 (74%)
Frame = +3 / +3
Query: 231 TRRRQMVTPSAMAS*QTSTRSSAERRTLRSLMAAENLLSMSDMGVSGGMATVPHQSVLSY 410
T RRQMVTPSAMAS QTS R SA LRSL AAE +S SD GV G ATVP QSVLS
Sbjct: 267 TTRRQMVTPSAMASWQTSMRGSAASLALRSLRAAEKRVSRSDKGVPAGSATVPPQSVLS* 446
Query: 411 TMVPPTRTRRSSCSW*LK*LGLSAST 488
MVPPTRT RSSCSW* *LGLSAST
Sbjct: 447 MMVPPTRTSRSSCSW*RT*LGLSAST 524
Score = 104 bits (221), Expect = 9e-022
Identities = 46/69 (66%), Positives = 52/69 (75%)
Frame = +2 / +2
Query: 230 DEAAANGDAVGDGELTDLNALVRGEANVEVPDGGREPPVDVRHGRLRWHGHGPAPERVVV 409
D+AAA+GDAVGDGEL DL+A V GE VEVP+GG + V+V GR R H APERVVV
Sbjct: 266 DDAAADGDAVGDGELADLDARVGGELGVEVPEGGGKAGVEVGQGRARRQRHRAAPERVVV 445
Query: 410 HDGAADAHQ 436
DGAADAHQ
Sbjct: 446 DDGAADAHQ 472
>gb|CA006913.1|CA006913 HU06B07r HU Hordeum vulgare subsp. vulgare cDNA clone HU06B07
5-PRIME, mRNA sequence
Length = 454
Score = 172 bits (371), Expect = 1e-042
Identities = 69/98 (70%), Positives = 82/98 (83%)
Frame = -2 / +3
Query: 598 ERAGVAGKVDFREGPALGNLDELLADEANLGAFDFAFVDADKPNYFNYHEQLLRLVRVGG 419
E+AG+A KVDFREG L L+ELLA++ ++DFAFVDADKPNY YHEQLLRLVRVGG
Sbjct: 159 EKAGMAHKVDFREGTGLERLEELLAEDDGAASYDFAFVDADKPNYVRYHEQLLRLVRVGG 338
Query: 418 TIVYDNTLWCGTVAMPPETPMSDIDRRFSAAIRDLNVR 305
TI+YDNTLW GTVA+P TP+SD+D RFSAA+RDLN +
Sbjct: 339 TIIYDNTLWGGTVALPAGTPLSDLDTRFSAALRDLNAK 452
Score = 90.9 bits (192), Expect(2) = 3e-021
Identities = 44/59 (74%), Positives = 45/59 (76%)
Frame = +3 / -1
Query: 312 LRSLMAAENLLSMSDMGVSGGMATVPHQSVLSYTMVPPTRTRRSSCSW*LK*LGLSAST 488
LRSL AAE +S SD GV G ATVP QSVLS MVPPTRT RSSCSW* *LGLSAST
Sbjct: 445 LRSLRAAEKRVSRSDKGVPAGSATVPPQSVLS*MMVPPTRTSRSSCSW*RT*LGLSAST 269
Score = 30.4 bits (60), Expect(2) = 3e-021
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = +2 / -3
Query: 548 QRGALAEVDLARHAGAL 598
Q GALAEV L RHAG L
Sbjct: 209 QAGALAEVHLVRHAGLL 159
>gb|BQ661977.1|BQ661977 HR01B07u HR Hordeum vulgare subsp. vulgare cDNA clone HR01B07
3-PRIME, mRNA sequence
Length = 502
Score = 169 bits (364), Expect = 1e-041
Identities = 68/85 (80%), Positives = 77/85 (90%)
Frame = -2 / -1
Query: 481 ADKPNYFNYHEQLLRLVRVGGTIVYDNTLWCGTVAMPPETPMSDIDRRFSAAIRDLNVRL 302
ADKPNY YHEQLLRLVRVGGTI+YDNTLW GTVA+P TP+SD+D RFSAA+RDLN +L
Sbjct: 502 ADKPNYVRYHEQLLRLVRVGGTIIYDNTLWGGTVALPAGTPLSDLDTRFSAALRDLNAKL 323
Query: 301 SADERVEVCQLAIADGVTICRRLV* 227
+AD R+EVCQLAIADGVTICRR+V*
Sbjct: 322 AADPRIEVCQLAIADGVTICRRVV* 248
Score = 126 bits (269), Expect = 1e-028
Identities = 61/83 (73%), Positives = 62/83 (74%)
Frame = +3 / +3
Query: 231 TRRRQMVTPSAMAS*QTSTRSSAERRTLRSLMAAENLLSMSDMGVSGGMATVPHQSVLSY 410
T RRQMVTPSAMAS QTS R SA LRSL AAE +S SD GV G ATVP QSVLSY
Sbjct: 252 TTRRQMVTPSAMASWQTSMRGSAASLALRSLRAAEKRVSRSDKGVPAGSATVPPQSVLSY 431
Query: 411 TMVPPTRTRRSSCSW*LK*LGLS 479
MVPPTRT RSSCSW* *LGLS
Sbjct: 432 MMVPPTRTSRSSCSW*RT*LGLS 500
Score = 107 bits (228), Expect = 1e-022
Identities = 47/69 (68%), Positives = 53/69 (76%)
Frame = +2 / +2
Query: 230 DEAAANGDAVGDGELTDLNALVRGEANVEVPDGGREPPVDVRHGRLRWHGHGPAPERVVV 409
D+AAA+GDAVGDGEL DL+A V GE VEVP+GG E V+V GR R H APERVVV
Sbjct: 251 DDAAADGDAVGDGELADLDARVGGELGVEVPEGGGEAGVEVGQGRARRQRHRAAPERVVV 430
Query: 410 HDGAADAHQ 436
+DGAADAHQ
Sbjct: 431 YDGAADAHQ 457
>gb|BQ762267.1|BQ762267 EBro01_SQ005_F11_R root, 3 week, hydroponic grown, no treatment, cv
Optic, EBro01 Hordeum vulgare subsp. vulgare cDNA clone
EBro01_SQ005_F11 5', mRNA sequence
Length = 664
Score = 168 bits (361), Expect(2) = 3e-041
Identities = 68/112 (60%), Positives = 84/112 (75%)
Frame = -2 / +3
Query: 598 ERAGVAGKVDFREGPALGNLDELLADEANLGAFDFAFVDADKPNYFNYHEQLLRLVRVGG 419
E+AGVA K+DFREGPAL LD LL DEAN G FDF FVDADK NY NYHE+L++LV+VGG
Sbjct: 180 EKAGVAHKIDFREGPALPVLDALLEDEANHGTFDFVFVDADKDNYLNYHERLMKLVKVGG 359
Query: 418 TIVYDNTLWCGTVAMPPETPMSDIDRRFSAAIRDLNVRLSADERVEVCQLAI 263
+ YDNTLW G+V +P + PM R + + DLN L+AD+RVE+CQL +
Sbjct: 360 LLGYDNTLWNGSVVLPADAPMRKYIRYYRDFVLDLNKALAADQRVEICQLPV 515
Score = 21.7 bits (41), Expect(2) = 3e-041
Identities = 6/8 (75%), Positives = 8/8 (100%)
Frame = -2 / +1
Query: 259 DGVTICRR 236
DG+T+CRR
Sbjct: 520 DGITLCRR 543
>gb|BE214450.2|BE214450 HV_CEb0003H21f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0003H21f, mRNA sequence
Length = 694
Score = 165 bits (355), Expect = 2e-040
Identities = 66/96 (68%), Positives = 78/96 (81%)
Frame = -2 / +3
Query: 598 ERAGVAGKVDFREGPALGNLDELLADEANLGAFDFAFVDADKPNYFNYHEQLLRLVRVGG 419
E+AG+A KVDFREG L L+ELLA++ ++DFAFVDADKPNY YHEQLLRLVRVGG
Sbjct: 405 EKAGMAHKVDFREGTGLERLEELLAEDDGAASYDFAFVDADKPNYVRYHEQLLRLVRVGG 584
Query: 418 TIVYDNTLWCGTVAMPPETPMSDIDRRFSAAIRDLN 311
TI+YDNTLW GTVA+P TP+ D+D RFS +RDLN
Sbjct: 585 TIIYDNTLWGGTVALPAGTPLVDLDTRFSGGLRDLN 692
>gb|BU977318.1|BU977318 HA11D12u HA Hordeum vulgare subsp. vulgare cDNA clone HA11D12
3-PRIME, mRNA sequence
Length = 580
Score = 151 bits (325), Expect(2) = 7e-040
Identities = 61/96 (63%), Positives = 78/96 (81%)
Frame = -2 / -2
Query: 508 GAFDFAFVDADKPNYFNYHEQLLRLVRVGGTIVYDNTLWCGTVAMPPETPMSDIDRRFSA 329
G+FDFAFVDADK NY +YHEQLLRLVRVGG + YDNTLW GTV+MP +TP+++ DR+
Sbjct: 426 GSFDFAFVDADKYNYGSYHEQLLRLVRVGGVLAYDNTLWGGTVSMPDDTPLTEEDRKKRD 247
Query: 328 AIRDLNVRLSADERVEVCQLAIADGVTICRRLV*WS 221
+IR N ++AD RVE QL IADG+T+CRR+V*++
Sbjct: 246 SIRGFNAMIAADARVEPVQLPIADGITLCRRVV*FA 139
Score = 102 bits (217), Expect = 2e-021
Identities = 54/88 (61%), Positives = 58/88 (65%)
Frame = +3 / +2
Query: 225 HQTRRRQMVTPSAMAS*QTSTRSSAERRTLRSLMAAENLLSMSDMGVSGGMATVPHQSVL 404
+QT RRQ V PSA+ S STR+SA L LM + L S S GVS GM TVP QSVL
Sbjct: 143 NQTTRRQSVIPSAIGSCTGSTRASAAIMALNPLMESRFLRSSSVSGVSSGMDTVPPQSVL 322
Query: 405 SYTMVPPTRTRRSSCSW*LK*LGLSAST 488
S PPTRT RSSCSW*L *L LSAST
Sbjct: 323 S*ASTPPTRTSRSSCSW*LP*LYLSAST 406
Score = 31.8 bits (63), Expect(2) = 7e-040
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = -2 / -3
Query: 598 ERAGVAGKVDFREGP 554
++AGVA KVDFREGP
Sbjct: 515 KKAGVAHKVDFREGP 471
>gb|AL503249.1|AL503249 AL503249 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW01E24T 5', mRNA sequence
Length = 700
Score = 159 bits (342), Expect = 1e-038
Identities = 64/90 (71%), Positives = 75/90 (83%)
Frame = -2 / +2
Query: 598 ERAGVAGKVDFREGPALGNLDELLADEANLGAFDFAFVDADKPNYFNYHEQLLRLVRVGG 419
E+AG+A KVDFREG L L+ELLA++ ++DFAFVDADKPNY YHEQLLRLVRVGG
Sbjct: 428 EKAGMAHKVDFREGTGLERLEELLAEDDGAASYDFAFVDADKPNYVRYHEQLLRLVRVGG 607
Query: 418 TIVYDNTLWCGTVAMPPETPMSDIDRRFSA 329
TI+YDNTLW GTVA+P TP+SD+D RFSA
Sbjct: 608 TIIYDNTLWGGTVALPAGTPLSDLDTRFSA 697
>gb|BE216491.2|BE216491 HV_CEb0010K05f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0010K05f, mRNA sequence
Length = 697
Score = 159 bits (342), Expect = 1e-038
Identities = 64/90 (71%), Positives = 75/90 (83%)
Frame = -2 / +2
Query: 598 ERAGVAGKVDFREGPALGNLDELLADEANLGAFDFAFVDADKPNYFNYHEQLLRLVRVGG 419
E+AG+A KVDFREG L L+ELLA++ ++DFAFVDADKPNY YHEQLLRLVRVGG
Sbjct: 428 EKAGMAHKVDFREGTGLERLEELLAEDDGAASYDFAFVDADKPNYVRYHEQLLRLVRVGG 607
Query: 418 TIVYDNTLWCGTVAMPPETPMSDIDRRFSA 329
TI+YDNTLW GTVA+P TP+SD+D RFSA
Sbjct: 608 TIIYDNTLWGGTVALPAGTPLSDLDTRFSA 697
>gb|BF624054.2|BF624054 HVSMEa0009A08f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0009A08f, mRNA sequence
Length = 804
Score = 158 bits (340), Expect = 2e-038
Identities = 63/93 (67%), Positives = 76/93 (81%)
Frame = -2 / +3
Query: 598 ERAGVAGKVDFREGPALGNLDELLADEANLGAFDFAFVDADKPNYFNYHEQLLRLVRVGG 419
E+AG+A KVDFREG L L+ELLA++ ++DFAFVDADKPNY YHEQLLRLVRVGG
Sbjct: 435 EKAGMAHKVDFREGTGLERLEELLAEDDGAASYDFAFVDADKPNYVRYHEQLLRLVRVGG 614
Query: 418 TIVYDNTLWCGTVAMPPETPMSDIDRRFSAAIR 320
TI+YDNTLW GTVA+P TP+ D+D RFSA ++
Sbjct: 615 TIIYDNTLWGGTVALPAGTPLFDLDTRFSAGLK 713
>gb|BJ549094.1|BJ549094 BJ549094 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags28c08 5', mRNA sequence
Length = 509
Score = 157 bits (338), Expect = 4e-038
Identities = 65/106 (61%), Positives = 79/106 (74%)
Frame = -2 / +3
Query: 598 ERAGVAGKVDFREGPALGNLDELLADEANLGAFDFAFVDADKPNYFNYHEQLLRLVRVGG 419
E+AGVA K+DFREGPAL LD LL DEAN G FDF FVDADK NY NYHE+L++LV+VGG
Sbjct: 192 EKAGVAHKIDFREGPALPVLDALLEDEANHGTFDFVFVDADKDNYLNYHERLMKLVKVGG 371
Query: 418 TIVYDNTLWCGTVAMPPETPMSDIDRRFSAAIRDLNVRLSADERVE 281
+ YDNTLW G+V +P + PM R + + DLN L+AD+RVE
Sbjct: 372 LLGYDNTLWNGSVVLPADAPMRKYIRYYRDFVLDLNKALAADQRVE 509
>gb|BI960166.1|BI960166 HVSMEn0023I06f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0023I06f, mRNA sequence
Length = 630
Score = 156 bits (335), Expect = 1e-037
Identities = 64/95 (67%), Positives = 76/95 (80%)
Frame = -2 / +2
Query: 598 ERAGVAGKVDFREGPALGNLDELLADEANLGAFDFAFVDADKPNYFNYHEQLLRLVRVGG 419
E+AG+A KVDFREG L L+ELLA++ ++DFAFVDADKPNY YHEQLLRLVRVGG
Sbjct: 302 EKAGMAHKVDFREGTGLERLEELLAEDDGAASYDFAFVDADKPNYVRYHEQLLRLVRVGG 481
Query: 418 TIVYDNTLWCGTVAMPPETPMSDIDRRFSAAIRDL 314
TI+YDNTLW GTVA+P P+ + RFSAA+RDL
Sbjct: 482 TIIYDNTLWGGTVALPAGAPLFHPNTRFSAALRDL 586
>gb|BE559087.1|BE559087 HV_CEb0022L14f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0022L14f, mRNA sequence
Length = 737
Score = 155 bits (334), Expect = 1e-037
Identities = 62/88 (70%), Positives = 73/88 (82%)
Frame = -2 / +3
Query: 598 ERAGVAGKVDFREGPALGNLDELLADEANLGAFDFAFVDADKPNYFNYHEQLLRLVRVGG 419
E+AG+A KVDFREG L L+ELLA++ ++DFAFVDADKPNY YHEQLLRLVRVGG
Sbjct: 465 EKAGMAHKVDFREGTGLERLEELLAEDDGAASYDFAFVDADKPNYVRYHEQLLRLVRVGG 644
Query: 418 TIVYDNTLWCGTVAMPPETPMSDIDRRF 335
TI+YDNTLW GTVA+P TP+SD+D RF
Sbjct: 645 TIIYDNTLWGGTVALPAGTPLSDLDTRF 728
>gb|BF260414.3|BF260414 HVSMEf0021O22f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0021O22f, mRNA sequence
Length = 650
Score = 152 bits (327), Expect(2) = 2e-037
Identities = 63/109 (57%), Positives = 84/109 (77%)
Frame = -2 / +2
Query: 547 GNLDELLADEANLGAFDFAFVDADKPNYFNYHEQLLRLVRVGGTIVYDNTLWCGTVAMPP 368
G + + L + + G+FDFAFVDADK NY +YHEQLLRLVRVGG + YDNTLW GTV+MP
Sbjct: 161 GPILDKLIADEDEGSFDFAFVDADKYNYGSYHEQLLRLVRVGGVLAYDNTLWGGTVSMPD 340
Query: 367 ETPMSDIDRRFSAAIRDLNVRLSADERVEVCQLAIADGVTICRRLV*WS 221
+TP+++ DR+ +IR N ++AD RVE QL IADG+T+CRR+V*++
Sbjct: 341 DTPLTEEDRKKRDSIRGFNAMIAADARVEPVQLPIADGITLCRRVV*FA 487
Score = 102 bits (217), Expect(2) = 7e-024
Identities = 54/88 (61%), Positives = 58/88 (65%)
Frame = +3 / -3
Query: 225 HQTRRRQMVTPSAMAS*QTSTRSSAERRTLRSLMAAENLLSMSDMGVSGGMATVPHQSVL 404
+QT RRQ V PSA+ S STR+SA L LM + L S S GVS GM TVP QSVL
Sbjct: 483 NQTTRRQSVIPSAIGSCTGSTRASAAIMALNPLMESRFLRSSSVSGVSSGMDTVPPQSVL 304
Query: 405 SYTMVPPTRTRRSSCSW*LK*LGLSAST 488
S PPTRT RSSCSW*L *L LSAST
Sbjct: 303 S*ASTPPTRTSRSSCSW*LP*LYLSAST 220
Score = 27.6 bits (54), Expect(2) = 7e-024
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = +2 / -2
Query: 554 GALAEVDLARHAGAL 598
GALAEVDL R AG L
Sbjct: 157 GALAEVDLVRDAGLL 113
Score = 23.1 bits (44), Expect(2) = 2e-037
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -3 / +3
Query: 591 PAWRARSTSARA 556
PA R RSTSARA
Sbjct: 120 PASRTRSTSARA 155
>gb|CA017209.1|CA017209 HV14G11u HV Hordeum vulgare subsp. vulgare cDNA clone HV14G11
3-PRIME, mRNA sequence
Length = 552
Score = 152 bits (327), Expect(2) = 2e-037
Identities = 63/109 (57%), Positives = 84/109 (77%)
Frame = -2 / -2
Query: 547 GNLDELLADEANLGAFDFAFVDADKPNYFNYHEQLLRLVRVGGTIVYDNTLWCGTVAMPP 368
G + + L + + G+FDFAFVDADK NY +YHEQLLRLVRVGG + YDNTLW GTV+MP
Sbjct: 407 GPILDKLIADEDEGSFDFAFVDADKYNYGSYHEQLLRLVRVGGVLAYDNTLWGGTVSMPD 228
Query: 367 ETPMSDIDRRFSAAIRDLNVRLSADERVEVCQLAIADGVTICRRLV*WS 221
+TP+++ DR+ +IR N ++AD RVE QL IADG+T+CRR+V*++
Sbjct: 227 DTPLTEEDRKKRDSIRGFNAMIAADARVEPVQLPIADGITLCRRVV*FA 81
Score = 102 bits (217), Expect(2) = 7e-024
Identities = 54/88 (61%), Positives = 58/88 (65%)
Frame = +3 / +1
Query: 225 HQTRRRQMVTPSAMAS*QTSTRSSAERRTLRSLMAAENLLSMSDMGVSGGMATVPHQSVL 404
+QT RRQ V PSA+ S STR+SA L LM + L S S GVS GM TVP QSVL
Sbjct: 85 NQTTRRQSVIPSAIGSCTGSTRASAAIMALNPLMESRFLRSSSVSGVSSGMDTVPPQSVL 264
Query: 405 SYTMVPPTRTRRSSCSW*LK*LGLSAST 488
S PPTRT RSSCSW*L *L LSAST
Sbjct: 265 S*ASTPPTRTSRSSCSW*LP*LYLSAST 348
Score = 27.6 bits (54), Expect(2) = 7e-024
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = +2 / +3
Query: 554 GALAEVDLARHAGAL 598
GALAEVDL R AG L
Sbjct: 411 GALAEVDLVRDAGLL 455
Score = 23.1 bits (44), Expect(2) = 2e-037
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -3 / -3
Query: 591 PAWRARSTSARA 556
PA R RSTSARA
Sbjct: 448 PASRTRSTSARA 413
>gb|BQ660910.1|BQ660910 HM01A23w HM Hordeum vulgare subsp. vulgare cDNA clone HM01A23
3-PRIME, mRNA sequence
Length = 543
Score = 152 bits (327), Expect(2) = 2e-037
Identities = 63/109 (57%), Positives = 84/109 (77%)
Frame = -2 / -2
Query: 547 GNLDELLADEANLGAFDFAFVDADKPNYFNYHEQLLRLVRVGGTIVYDNTLWCGTVAMPP 368
G + + L + + G+FDFAFVDADK NY +YHEQLLRLVRVGG + YDNTLW GTV+MP
Sbjct: 410 GPILDKLIADEDEGSFDFAFVDADKYNYGSYHEQLLRLVRVGGVLAYDNTLWGGTVSMPD 231
Query: 367 ETPMSDIDRRFSAAIRDLNVRLSADERVEVCQLAIADGVTICRRLV*WS 221
+TP+++ DR+ +IR N ++AD RVE QL IADG+T+CRR+V*++
Sbjct: 230 DTPLTEEDRKKRDSIRGFNAMIAADARVEPVQLPIADGITLCRRVV*FA 84
Score = 102 bits (217), Expect(2) = 7e-024
Identities = 54/88 (61%), Positives = 58/88 (65%)
Frame = +3 / +1
Query: 225 HQTRRRQMVTPSAMAS*QTSTRSSAERRTLRSLMAAENLLSMSDMGVSGGMATVPHQSVL 404
+QT RRQ V PSA+ S STR+SA L LM + L S S GVS GM TVP QSVL
Sbjct: 88 NQTTRRQSVIPSAIGSCTGSTRASAAIMALNPLMESRFLRSSSVSGVSSGMDTVPPQSVL 267
Query: 405 SYTMVPPTRTRRSSCSW*LK*LGLSAST 488
S PPTRT RSSCSW*L *L LSAST
Sbjct: 268 S*ASTPPTRTSRSSCSW*LP*LYLSAST 351
Score = 27.6 bits (54), Expect(2) = 7e-024
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = +2 / +3
Query: 554 GALAEVDLARHAGAL 598
GALAEVDL R AG L
Sbjct: 414 GALAEVDLVRDAGLL 458
Score = 23.1 bits (44), Expect(2) = 2e-037
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -3 / -3
Query: 591 PAWRARSTSARA 556
PA R RSTSARA
Sbjct: 451 PASRTRSTSARA 416
>gb|BE519617.1|BE519617 HV_CEb0016H01f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0016H01f, mRNA sequence
Length = 705
Score = 155 bits (333), Expect = 2e-037
Identities = 63/89 (70%), Positives = 73/89 (82%)
Frame = -2 / +3
Query: 598 ERAGVAGKVDFREGPALGNLDELLADEANLGAFDFAFVDADKPNYFNYHEQLLRLVRVGG 419
E+AG+A KVDFREG L L+ELLA++ + DFAFVDADKPNY YHEQLLRLVRVGG
Sbjct: 435 EKAGMAHKVDFREGTGLERLEELLAEDDGAASCDFAFVDADKPNYVRYHEQLLRLVRVGG 614
Query: 418 TIVYDNTLWCGTVAMPPETPMSDIDRRFS 332
TI+YDNTLW GTVA+P TP+SD+D RFS
Sbjct: 615 TIIYDNTLWGGTVALPAGTPLSDLDTRFS 701
>gb|BJ466490.1|BJ466490 BJ466490 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags32g18 3', mRNA sequence
Length = 646
Score = 151 bits (324), Expect(2) = 4e-037
Identities = 62/106 (58%), Positives = 81/106 (76%)
Frame = -2 / -3
Query: 547 GNLDELLADEANLGAFDFAFVDADKPNYFNYHEQLLRLVRVGGTIVYDNTLWCGTVAMPP 368
G + + L + + G+FDFAFVDADK NY +YHEQLLRLVRVGG + YDNTLW GTV+MP
Sbjct: 362 GPILDKLIADEDEGSFDFAFVDADKYNYGSYHEQLLRLVRVGGVLAYDNTLWGGTVSMPD 183
Query: 367 ETPMSDIDRRFSAAIRDLNVRLSADERVEVCQLAIADGVTICRRLV 230
+TP+++ DR+ +IR N ++AD RVE QL IADG+T+CRR+V
Sbjct: 182 DTPLTEEDRKKRDSIRGFNAMIAADARVEPVQLPIADGITLCRRVV 45
Score = 99.6 bits (211), Expect(2) = 5e-023
Identities = 53/86 (61%), Positives = 56/86 (65%)
Frame = +3 / +1
Query: 231 TRRRQMVTPSAMAS*QTSTRSSAERRTLRSLMAAENLLSMSDMGVSGGMATVPHQSVLSY 410
T RRQ V PSA+ S STR+SA L LM + L S S GVS GM TVP QSVLS
Sbjct: 46 TTRRQSVIPSAIGSCTGSTRASAAIMALNPLMESRFLRSSSVSGVSSGMDTVPPQSVLS* 225
Query: 411 TMVPPTRTRRSSCSW*LK*LGLSAST 488
PPTRT RSSCSW*L *L LSAST
Sbjct: 226 ASTPPTRTSRSSCSW*LP*LYLSAST 303
Score = 27.6 bits (54), Expect(2) = 5e-023
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = +2 / +3
Query: 554 GALAEVDLARHAGAL 598
GALAEVDL R AG L
Sbjct: 366 GALAEVDLVRDAGLL 410
Score = 23.1 bits (44), Expect(2) = 4e-037
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -3 / -1
Query: 591 PAWRARSTSARA 556
PA R RSTSARA
Sbjct: 403 PASRTRSTSARA 368
>gb|BE519891.1|BE519891 HV_CEb0021J17f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0021J17f, mRNA sequence
Length = 714
Score = 153 bits (328), Expect = 1e-036
Identities = 61/87 (70%), Positives = 72/87 (82%)
Frame = -2 / +1
Query: 598 ERAGVAGKVDFREGPALGNLDELLADEANLGAFDFAFVDADKPNYFNYHEQLLRLVRVGG 419
E+AG+A KVDFREG L L+ELLA++ ++DFAFVDADKPNY YHEQLLRLVRVGG
Sbjct: 454 EKAGMAHKVDFREGTGLERLEELLAEDDGAASYDFAFVDADKPNYVRYHEQLLRLVRVGG 633
Query: 418 TIVYDNTLWCGTVAMPPETPMSDIDRR 338
TI+YDNTLW GTVA+P TP+SD+D R
Sbjct: 634 TIIYDNTLWGGTVALPAGTPLSDLDTR 714
>gb|BQ661501.1|BQ661501 HM03L08u HM Hordeum vulgare subsp. vulgare cDNA clone HM03L08
3-PRIME, mRNA sequence
Length = 486
Score = 152 bits (327), Expect = 1e-036
Identities = 63/109 (57%), Positives = 84/109 (77%)
Frame = -2 / -1
Query: 547 GNLDELLADEANLGAFDFAFVDADKPNYFNYHEQLLRLVRVGGTIVYDNTLWCGTVAMPP 368
G + + L + + G+FDFAFVDADK NY +YHEQLLRLVRVGG + YDNTLW GTV+MP
Sbjct: 465 GPILDKLIADEDEGSFDFAFVDADKYNYGSYHEQLLRLVRVGGVLAYDNTLWGGTVSMPD 286
Query: 367 ETPMSDIDRRFSAAIRDLNVRLSADERVEVCQLAIADGVTICRRLV*WS 221
+TP+++ DR+ +IR N ++AD RVE QL IADG+T+CRR+V*++
Sbjct: 285 DTPLTEEDRKKRDSIRGFNAMIAADARVEPVQLPIADGITLCRRVV*FA 139
Score = 102 bits (217), Expect = 2e-021
Identities = 54/88 (61%), Positives = 58/88 (65%)
Frame = +3 / +2
Query: 225 HQTRRRQMVTPSAMAS*QTSTRSSAERRTLRSLMAAENLLSMSDMGVSGGMATVPHQSVL 404
+QT RRQ V PSA+ S STR+SA L LM + L S S GVS GM TVP QSVL
Sbjct: 143 NQTTRRQSVIPSAIGSCTGSTRASAAIMALNPLMESRFLRSSSVSGVSSGMDTVPPQSVL 322
Query: 405 SYTMVPPTRTRRSSCSW*LK*LGLSAST 488
S PPTRT RSSCSW*L *L LSAST
Sbjct: 323 S*ASTPPTRTSRSSCSW*LP*LYLSAST 406
>gb|BF065240.1|BF065240 HV_CEb0024I11f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0024I11f, mRNA sequence
Length = 807
Score = 148 bits (317), Expect(2) = 1e-036
Identities = 60/91 (65%), Positives = 72/91 (79%)
Frame = -2 / +3
Query: 598 ERAGVAGKVDFREGPALGNLDELLADEANLGAFDFAFVDADKPNYFNYHEQLLRLVRVGG 419
E+AG+A KVDFREG L L+ELLA++ ++DFAF DADKPNY YHEQLLRLVR GG
Sbjct: 450 EKAGMAHKVDFREGTGLERLEELLAEDDGAASYDFAFGDADKPNYVRYHEQLLRLVRGGG 629
Query: 418 TIVYDNTLWCGTVAMPPETPMSDIDRRFSAA 326
TI+YDNTLW GTVA+P TP+S++D RF A
Sbjct: 630 TIIYDNTLWGGTVALPGGTPLSELDTRFPPA 722
Score = 24.4 bits (47), Expect(2) = 1e-036
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -2 / +2
Query: 337 FSAAIRDLNVRLSADERVEVCQL 269
FSA RDLN +++A+ + L
Sbjct: 710 FSAGFRDLNAKVAANRALRFANL 778
>gb|AV924692.1|AV924692 AV924692 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd16j09 5', mRNA sequence
Length = 328
Score = 150 bits (322), Expect = 6e-036
Identities = 60/93 (64%), Positives = 75/93 (80%)
Frame = -2 / +3
Query: 508 GAFDFAFVDADKPNYFNYHEQLLRLVRVGGTIVYDNTLWCGTVAMPPETPMSDIDRRFSA 329
G+FDFAFVDADK NY +YHEQLLRLVRVGG + YDNTLW GTV+MP +TP+++ DR+
Sbjct: 12 GSFDFAFVDADKYNYGSYHEQLLRLVRVGGVLAYDNTLWGGTVSMPDDTPLTEEDRKKRD 191
Query: 328 AIRDLNVRLSADERVEVCQLAIADGVTICRRLV 230
+IR N ++AD RVE QL IADG+T+CRR+V
Sbjct: 192 SIRGFNAMIAADARVEPVQLPIADGITLCRRVV 290
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 238,706,664
Number of Sequences: 312970
Number of extensions: 3322416
Number of successful extensions: 69560
Number of sequences better than 1.0e-020: 141
length of database: 58,378,179
effective HSP length: 51
effective length of database: 42,416,709
effective search space used: 6277672932
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)