TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2943819.2.1
(1121 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
emb|X70877.1|HVMYB1 H.vulgare myb1 mRNA 304 7e-089
gb|BF627287.2|BF627287 HVSMEb0004H07f Hordeum vulgare seedl... 299 1e-085
emb|X70876.1|HVMYB2 H.vulgare myb2 mRNA 299 2e-085
gb|BF259663.3|BF259663 HVSMEf0019O20f Hordeum vulgare seedl... 314 6e-085
emb|X70879.1|HVMYB1G H.vulgare Myb1 gene 209 3e-083
gb|BG301022.1|BG301022 HVSMEb0019E16f Hordeum vulgare seedl... 305 3e-082
gb|BG301049.1|BG301049 HVSMEb0019G16f Hordeum vulgare seedl... 305 3e-082
gb|BI960347.1|BI960347 HVSMEn0024E22f Hordeum vulgare rachi... 304 6e-082
gb|BF617142.2|BF617142 HVSMEc0014M02f Hordeum vulgare seedl... 279 2e-074
gb|BF064941.1|BF064941 HV_CEb0022A15f Hordeum vulgare seedl... 157 6e-073
emb|X70880.1|HVMYB2G H.vulgare Myb2 gene 207 4e-059
gb|BF261857.2|BF261857 HV_CEa0002G15f Hordeum vulgare seedl... 228 5e-059
gb|BI958189.1|BI958189 HVSMEn0013M24f Hordeum vulgare rachi... 226 1e-058
gb|CA019195.1|CA019195 HV11C18r HV Hordeum vulgare subsp. v... 209 4e-058
gb|BI959020.1|BI959020 HVSMEn0017M09f Hordeum vulgare rachi... 224 9e-058
gb|BF620286.3|BF620286 HVSMEc0019F08f Hordeum vulgare seedl... 223 1e-057
gb|BF259477.2|BF259477 HVSMEf0019D12f Hordeum vulgare seedl... 222 3e-057
gb|BM816803.1|BM816803 HC114B11_SK.ab1 HC Hordeum vulgare s... 220 1e-056
gb|BG300704.1|BG300704 HVSMEb0018B03f Hordeum vulgare seedl... 219 2e-056
gb|BE559390.2|BE559390 HV_CEb0024H06f Hordeum vulgare seedl... 219 2e-056
gb|BF617565.3|BF617565 HVSMEc0018A12f Hordeum vulgare seedl... 219 2e-056
gb|BM371065.2|BM371065 EBro04_SQ003_G02_R root, 3 week, sal... 219 2e-056
gb|BM371066.2|BM371066 EBro04_SQ003_G03_R root, 3 week, sal... 219 2e-056
gb|BQ763917.1|BQ763917 EBro03_SQ005_C21_R root, 3 week, wat... 219 2e-056
gb|CA032540.1|CA032540 HX13G05r HX Hordeum vulgare subsp. v... 219 2e-056
gb|BE558747.2|BE558747 HV_CEb0020E02f Hordeum vulgare seedl... 219 3e-056
gb|BG343209.2|BG343209 HVSMEg0005B14f Hordeum vulgare pre-a... 218 4e-056
gb|BM443626.2|BM443626 EBro02_SQ005_P07_R root, 3 week, hyd... 215 3e-055
gb|CK123641.1|CK123641 BES1824104m18 BES1824 Hordeum vulgar... 214 9e-055
gb|BI946875.1|BI946875 HVSMEl0002J21f Hordeum vulgare spike... 210 2e-053
gb|BU998112.1|BU998112 HI10A14r HI Hordeum vulgare subsp. v... 208 4e-053
gb|BF617439.1|BF617439 HVSMEc0017F20f Hordeum vulgare seedl... 203 8e-053
gb|BM370838.2|BM370838 EBro04_SQ002_H14_R root, 3 week, sal... 205 4e-052
gb|BI959333.1|BI959333 HVSMEn0019E14f Hordeum vulgare rachi... 202 3e-051
gb|BU996472.1|BU996472 HM13L14r HM Hordeum vulgare subsp. v... 202 3e-051
emb|X70878.1|HVMYB3 H.vulgare myb3 mRNA 202 3e-051
gb|BQ761004.1|BQ761004 EBro04_SQ001_O04_R root, 3 week, sal... 199 2e-050
gb|CV053597.1|CV053597 BNEL101a5 Barley EST endosperm libra... 193 1e-048
gb|AV914947.1|AV914947 AV914947 K. Sato unpublished cDNA li... 190 1e-047
gb|CB883071.1|CB883071 HQ01B16w HQ Hordeum vulgare subsp. v... 186 2e-046
gb|AY672068.1| Hordeum vulgare subsp. vulgare myb transcrip... 186 2e-046
gb|BI957410.1|BI957410 HVSMEn0009G13f Hordeum vulgare rachi... 186 2e-046
gb|CB882601.1|CB882601 HL02F10w HL Hordeum vulgare subsp. v... 184 9e-046
emb|X99973.1|HVMYB4TRF H.vulgare mRNA for myb4 transcriptio... 182 4e-045
emb|X70881.1|HVMYB3G H.vulgare myb3 gene 128 5e-045
gb|CB877704.1|CB877704 HP05O05T HP Hordeum vulgare subsp. v... 180 1e-044
gb|BG369720.1|BG369720 HVSMEi0025K10f Hordeum vulgare 20 DA... 179 3e-044
gb|BQ467188.1|BQ467188 HS02O24r HS Hordeum vulgare subsp. v... 179 3e-044
gb|CB876695.1|CB876695 HP02B11T HP Hordeum vulgare subsp. v... 179 3e-044
gb|BQ463523.1|BQ463523 HI05J08r HI Hordeum vulgare subsp. v... 178 4e-044
gb|CV058923.1|CV058923 BNEL42e10 Barley EST endosperm libra... 178 4e-044
gb|CA002506.1|CA002506 HS07L12r HS Hordeum vulgare subsp. v... 175 5e-043
gb|CA013607.1|CA013607 HT08P20r HT Hordeum vulgare subsp. v... 174 9e-043
gb|CA014662.1|CA014662 HT11P22r HT Hordeum vulgare subsp. v... 174 9e-043
emb|X87690.1|HVRNAGAM1 H.vulgare mRNA for GAMyb protein 174 9e-043
gb|CA019900.1|CA019900 HV13K14r HV Hordeum vulgare subsp. v... 173 1e-042
gb|AL507585.1|AL507585 AL507585 Hordeum vulgare Barke devel... 169 2e-041
gb|CV063729.1|CV063729 BNEL92e6 Barley EST endosperm librar... 168 4e-041
gb|CV056415.1|CV056415 BNEL17E10 Barley EST endosperm libra... 168 6e-041
gb|CV056818.1|CV056818 BNEL20h7 Barley EST endosperm librar... 168 6e-041
gb|CV058910.1|CV058910 BNEL42d1 Barley EST endosperm librar... 168 6e-041
gb|CV062377.1|CV062377 BNEL79d11 Barley EST endosperm libra... 168 6e-041
gb|CV058774.1|CV058774 BNEL40g12 Barley EST endosperm libra... 166 1e-040
gb|CV062831.1|CV062831 BNEL83e5 Barley EST endosperm librar... 166 1e-040
gb|BQ764651.1|BQ764651 EBca01_SQ004_C14_R carpel, pre-anthe... 166 2e-040
gb|BQ460434.1|BQ460434 HA09K10r HA Hordeum vulgare subsp. v... 164 1e-039
gb|BQ471469.1|BQ471469 HV02I08r HV Hordeum vulgare subsp. v... 96 2e-039
gb|BM371860.2|BM371860 EBma08_SQ004_D12_R maternal, 28 DPA,... 161 7e-039
gb|BF626054.2|BF626054 HVSMEa0015H17f Hordeum vulgare seedl... 160 1e-038
gb|CA027463.1|CA027463 HZ59A03r HZ Hordeum vulgare subsp. v... 160 1e-038
gb|BF618630.2|BF618630 HVSMEc0006O07f Hordeum vulgare seedl... 134 2e-038
gb|BU975705.1|BU975705 HB32A20r BC Hordeum vulgare subsp. v... 159 3e-038
gb|BU975173.1|BU975173 HB30F02r BC Hordeum vulgare subsp. v... 158 5e-038
gb|BQ466900.1|BQ466900 HS01O24T HS Hordeum vulgare subsp. v... 157 9e-038
gb|BF619532.3|BF619532 HVSMEc0003P10f Hordeum vulgare seedl... 138 2e-037
gb|AV920069.1|AV920069 AV920069 K. Sato unpublished cDNA li... 108 2e-037
gb|AL507948.1|AL507948 AL507948 Hordeum vulgare Barke devel... 155 4e-037
gb|BI956816.1|BI956816 HVSMEn0005H11f Hordeum vulgare rachi... 154 8e-037
gb|AY008692.1| Hordeum vulgare transcription factor GAMyb (... 129 2e-036
gb|BQ753632.1|BQ753632 EBan01_SQ004_M23_R anther, yellow st... 152 3e-036
gb|CV063055.1|CV063055 BNEL86b3 Barley EST endosperm librar... 147 9e-035
gb|BF627413.1|BF627413 HVSMEb0004M17f Hordeum vulgare seedl... 145 3e-034
gb|CK123590.1|CK123590 BES1824104i24 BES1824 Hordeum vulgar... 145 3e-034
gb|BI779364.2|BI779364 EBro01_SQ003_M18_R root, 3 week, hyd... 128 4e-034
gb|BI954784.1|BI954784 HVSMEm0019M04f Hordeum vulgare green... 131 6e-030
gb|AV933832.1|AV933832 AV933832 K. Sato unpublished cDNA li... 131 6e-030
gb|BQ765682.1|BQ765682 EBro03_SQ007_I24_R root, 3 week, wat... 131 6e-030
gb|CA003603.1|CA003603 HS14P22r HS Hordeum vulgare subsp. v... 129 2e-029
gb|AV932650.1|AV932650 AV932650 K. Sato unpublished cDNA li... 128 6e-029
gb|BM443593.2|BM443593 EBro02_SQ005_M21_R root, 3 week, hyd... 121 7e-027
gb|BG369102.2|BG369102 HVSMEi0021L15f Hordeum vulgare 20 DA... 120 1e-026
gb|AL507750.1|AL507750 AL507750 Hordeum vulgare Barke devel... 108 4e-026
gb|BQ756020.1|BQ756020 EBem05_SQ001_E11_R embryo, 14 DPA, n... 108 4e-026
gb|CV063142.1|CV063142 BNEL87b1 Barley EST endosperm librar... 102 6e-025
gb|CV063485.1|CV063485 BNEL8H1 Barley EST endosperm library... 102 6e-025
gb|CV059557.1|CV059557 BNEL49d7 Barley EST endosperm librar... 102 6e-025
gb|BG343954.1|BG343954 HVSMEg0007D14f Hordeum vulgare pre-a... 114 8e-025
gb|CV057037.1|CV057037 BNEL23d1 Barley EST endosperm librar... 102 8e-025
gb|CA008589.1|CA008589 HU11H04r HU Hordeum vulgare subsp. v... 114 1e-024
gb|CK124462.1|CK124462 BES1824109d16 BES1824 Hordeum vulgar... 100 2e-024
gb|CK124499.1|CK124499 BES1824109g02 BES1824 Hordeum vulgar... 100 2e-024
gb|CV053601.1|CV053601 BNEL101a9 Barley EST endosperm libra... 102 1e-023
gb|BG368576.2|BG368576 HVSMEi0019M02f Hordeum vulgare 20 DA... 105 3e-022
gb|BE455245.2|BE455245 HVSMEh0096L16f Hordeum vulgare 5-45 ... 89 8e-022
gb|AF189788.1|AF189788 Hordeum vulgare putative c-myb-like ... 89 3e-021
gb|BF629773.1|BF629773 HVSMEb0013M11f Hordeum vulgare seedl... 102 4e-021
gb|BJ471839.1|BJ471839 BJ471839 K. Sato unpublished cDNA li... 84 6e-021
>emb|X70877.1|HVMYB1 H.vulgare myb1 mRNA
Length = 1284
Score = 304 bits (658), Expect(4) = 7e-089
Identities = 115/131 (87%), Positives = 124/131 (94%)
Frame = -2 / +2
Query: 1120 GRSPCCEKAHTNRGAWTKEEDERLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYL 941
GRSPCCEKAHTN+GAWTKEED+RL AYI+AHGEGCWRSLPKAAGLLRCGKSCRLRWINYL
Sbjct: 215 GRSPCCEKAHTNKGAWTKEEDDRLTAYIKAHGEGCWRSLPKAAGLLRCGKSCRLRWINYL 394
Query: 940 RPDLKRGNFTADEDDLIVKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHVRRKLLGRGI 761
RPDLKRGNF+ +ED+LI+KLHSLLGNKWSLIA RLPGRTDNEIKNYWNTH+RRKL RGI
Sbjct: 395 RPDLKRGNFSHEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLTSRGI 574
Query: 760 DPVTHRPIAAD 728
DPVTHR I +D
Sbjct: 575 DPVTHRAINSD 607
Score = 197 bits (425), Expect(3) = 2e-050
Identities = 92/131 (70%), Positives = 97/131 (74%)
Frame = +3 / -1
Query: 729 SAAMGRCVTGSMPLPSSFRRTCVFQ*FLISLSVRPGSRAAMSDHLFPRRLCSLTMRSSSS 908
S + R VTGS+P SF R CVFQ*FLISLSV PGS A+ DHLFPRRL SL M SSSS
Sbjct: 606 SLLIARWVTGSIPRLVSFLRMCVFQ*FLISLSVLPGSLPAIRDHLFPRRLWSLMMSSSSS 427
Query: 909 AVKLPRFRSGRR*LIHRSRQLLPHRSRPAALGSDRQHPSPCARM*ATXXXXXXLVHAPLL 1088
+KLPR RSGRR*LI R RQLLP RSRPAALG +RQ PSPCA M*A LV APLL
Sbjct: 426 WLKLPRLRSGRR*LIQRRRQLLPQRSRPAALGRERQQPSPCALM*AVSRSSSSLVQAPLL 247
Query: 1089 VCAFSQQGDRP 1121
VCAFSQ GD P
Sbjct: 246 VCAFSQHGDLP 214
Score = 39.1 bits (79), Expect(4) = 7e-089
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = -2 / +2
Query: 634 RCPDLNLDLCISPP 593
+CPDLNLDLCISPP
Sbjct: 788 KCPDLNLDLCISPP 829
Score = 28.1 bits (55), Expect(4) = 7e-089
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = -2 / +2
Query: 409 LGLRGGMLDFRGLKMK* 359
+GLR MLDFR ++MK*
Sbjct: 965 MGLRTAMLDFRSIEMK* 1015
Score = 24.9 bits (48), Expect(3) = 2e-050
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3 / -1
Query: 588 WHGGLMQRSRLR 623
W GGLM RSR R
Sbjct: 834 WIGGLMHRSRFR 799
Score = 22.6 bits (43), Expect(4) = 7e-089
Identities = 6/13 (46%), Positives = 10/13 (76%)
Frame = -2 / +2
Query: 487 LCFGCSLGVQKGA 449
LCF CS+G+ + +
Sbjct: 905 LCFSCSMGLPRSS 943
Score = 22.1 bits (42), Expect(3) = 2e-050
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +2 / -3
Query: 353 LRSLHLEASKVQH 391
L S HL+AS+V+H
Sbjct: 1021 LCSFHLDASEVEH 983
>gb|BF627287.2|BF627287 HVSMEb0004H07f Hordeum vulgare seedling shoot EST library HVcDNA0002
(Dehydration stress) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEb0004H07f, mRNA sequence
Length = 756
Score = 299 bits (647), Expect(2) = 1e-085
Identities = 111/130 (85%), Positives = 124/130 (95%)
Frame = -2 / +1
Query: 1120 GRSPCCEKAHTNRGAWTKEEDERLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYL 941
GRSPCCEK HTN+GAWTKEED+RL+AYIRA+GEGCWRSLPKAAGLLRCGKSCRLRW+NYL
Sbjct: 55 GRSPCCEKEHTNKGAWTKEEDQRLIAYIRANGEGCWRSLPKAAGLLRCGKSCRLRWMNYL 234
Query: 940 RPDLKRGNFTADEDDLIVKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHVRRKLLGRGI 761
RPDLKRGNFT DED+LI++LHSLLGNKWSLIA +LPGRTDNEIKNYWNTH++RKLL RG+
Sbjct: 235 RPDLKRGNFTDDEDELIIRLHSLLGNKWSLIAGQLPGRTDNEIKNYWNTHIKRKLLSRGM 414
Query: 760 DPVTHRPIAA 731
DP THRP+ A
Sbjct: 415 DPHTHRPLTA 444
Score = 194 bits (418), Expect = 8e-049
Identities = 90/131 (68%), Positives = 94/131 (71%)
Frame = +3 / -2
Query: 729 SAAMGRCVTGSMPLPSSFRRTCVFQ*FLISLSVRPGSRAAMSDHLFPRRLCSLTMRSSSS 908
+A GRCV GSMP S R CVFQ*FLISLSV PGS AM DHL P RL M SSSS
Sbjct: 446 TAVSGRCVCGSMPRERSLRLMCVFQ*FLISLSVLPGSWPAMRDHLLPSRLWRRMMSSSSS 267
Query: 909 AVKLPRFRSGRR*LIHRSRQLLPHRSRPAALGSDRQHPSPCARM*ATXXXXXXLVHAPLL 1088
+VKLPR RSGRR* I R RQLLP RSRPAALGS+RQ PSP A M*A LVHAPLL
Sbjct: 266 SVKLPRLRSGRR*FIQRRRQLLPQRSRPAALGSERQQPSPLALM*AISRWSSSLVHAPLL 87
Query: 1089 VCAFSQQGDRP 1121
VC+FSQ GD P
Sbjct: 86 VCSFSQHGDLP 54
Score = 54.7 bits (113), Expect(4) = 1e-022
Identities = 22/30 (73%), Positives = 25/30 (83%)
Frame = -1 / +3
Query: 866 EQVVAHRRAAPGADGQRDQELLEHARPAEA 777
+QVV+HRR A G DGQRDQELLEHA A+A
Sbjct: 309 QQVVSHRRPAAGQDGQRDQELLEHAHQAQA 398
Score = 50.1 bits (103), Expect(4) = 1e-022
Identities = 21/28 (75%), Positives = 22/28 (78%)
Frame = -1 / +3
Query: 1121 GAVALLREGAHQQGRVDQGGGRAPGGLH 1038
G VA+LREGAHQQG VDQGGG A LH
Sbjct: 54 GEVAVLREGAHQQGGVDQGGGPAADRLH 137
Score = 38.2 bits (77), Expect(2) = 1e-085
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = -2 / +1
Query: 697 PSPSXXXXXXXXXXXXXXXAPRCPDLNLDLCISPPC 590
P P PRCPDLNLDL + P C
Sbjct: 547 PVPVESSDDDGSSGATSTGEPRCPDLNLDLSVGPAC 654
Score = 32.2 bits (64), Expect(4) = 1e-022
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = -1 / +3
Query: 977 RQELPAAVDQLPPARPE 927
RQELP +D+LPP RP+
Sbjct: 198 RQELPPPLDELPPPRPQ 248
Score = 29.9 bits (59), Expect(4) = 1e-022
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -1 / +3
Query: 653 DGRQGAQMPRPQPRPL 606
D +GA +PRPQPRP+
Sbjct: 591 DEHRGATVPRPQPRPV 638
>emb|X70876.1|HVMYB2 H.vulgare myb2 mRNA
Length = 1102
Score = 299 bits (647), Expect(2) = 2e-085
Identities = 111/130 (85%), Positives = 124/130 (95%)
Frame = -2 / +2
Query: 1120 GRSPCCEKAHTNRGAWTKEEDERLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYL 941
GRSPCCEK HTN+GAWTKEED+RL+AYIRA+GEGCWRSLPKAAGLLRCGKSCRLRW+NYL
Sbjct: 47 GRSPCCEKEHTNKGAWTKEEDQRLIAYIRANGEGCWRSLPKAAGLLRCGKSCRLRWMNYL 226
Query: 940 RPDLKRGNFTADEDDLIVKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHVRRKLLGRGI 761
RPDLKRGNFT DED+LI++LHSLLGNKWSLIA +LPGRTDNEIKNYWNTH++RKLL RG+
Sbjct: 227 RPDLKRGNFTDDEDELIIRLHSLLGNKWSLIAGQLPGRTDNEIKNYWNTHIKRKLLSRGM 406
Query: 760 DPVTHRPIAA 731
DP THRP+ A
Sbjct: 407 DPHTHRPLTA 436
Score = 194 bits (418), Expect = 8e-049
Identities = 90/131 (68%), Positives = 94/131 (71%)
Frame = +3 / -2
Query: 729 SAAMGRCVTGSMPLPSSFRRTCVFQ*FLISLSVRPGSRAAMSDHLFPRRLCSLTMRSSSS 908
+A GRCV GSMP S R CVFQ*FLISLSV PGS AM DHL P RL M SSSS
Sbjct: 438 TAVSGRCVCGSMPRERSLRLMCVFQ*FLISLSVLPGSWPAMRDHLLPSRLWRRMMSSSSS 259
Query: 909 AVKLPRFRSGRR*LIHRSRQLLPHRSRPAALGSDRQHPSPCARM*ATXXXXXXLVHAPLL 1088
+VKLPR RSGRR* I R RQLLP RSRPAALGS+RQ PSP A M*A LVHAPLL
Sbjct: 258 SVKLPRLRSGRR*FIQRRRQLLPQRSRPAALGSERQQPSPLALM*AISRWSSSLVHAPLL 79
Query: 1089 VCAFSQQGDRP 1121
VC+FSQ GD P
Sbjct: 78 VCSFSQHGDLP 46
Score = 54.7 bits (113), Expect(4) = 4e-022
Identities = 22/30 (73%), Positives = 25/30 (83%)
Frame = -1 / +1
Query: 866 EQVVAHRRAAPGADGQRDQELLEHARPAEA 777
+QVV+HRR A G DGQRDQELLEHA A+A
Sbjct: 301 QQVVSHRRPAAGQDGQRDQELLEHAHQAQA 390
Score = 50.1 bits (103), Expect(4) = 4e-022
Identities = 21/28 (75%), Positives = 22/28 (78%)
Frame = -1 / +1
Query: 1121 GAVALLREGAHQQGRVDQGGGRAPGGLH 1038
G VA+LREGAHQQG VDQGGG A LH
Sbjct: 46 GEVAVLREGAHQQGGVDQGGGPAADRLH 129
Score = 37.7 bits (76), Expect(2) = 2e-085
Identities = 14/35 (40%), Positives = 15/35 (42%)
Frame = -2 / +2
Query: 697 PSPSXXXXXXXXXXXXXXXAPRCPDLNLDLCISPP 593
P P PRCPDLNLDL + PP
Sbjct: 539 PVPVESSDDDGSSGATSTGEPRCPDLNLDLSVGPP 643
Score = 32.2 bits (64), Expect(4) = 4e-022
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = -1 / +1
Query: 977 RQELPAAVDQLPPARPE 927
RQELP +D+LPP RP+
Sbjct: 190 RQELPPPLDELPPPRPQ 240
Score = 29.9 bits (59), Expect(4) = 4e-022
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -1 / +1
Query: 653 DGRQGAQMPRPQPRPL 606
D +GA +PRPQPRP+
Sbjct: 583 DEHRGATVPRPQPRPV 630
>gb|BF259663.3|BF259663 HVSMEf0019O20f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEf0019O20f, mRNA sequence
Length = 528
Score = 314 bits (680), Expect = 6e-085
Identities = 120/137 (87%), Positives = 129/137 (94%)
Frame = -2 / +2
Query: 1120 GRSPCCEKAHTNRGAWTKEEDERLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYL 941
GRSPCCEKAHTN+GAWT+EEDERLVA++RAHGEGCWRSLP AAGLLRCGKSCRLRWINYL
Sbjct: 71 GRSPCCEKAHTNKGAWTREEDERLVAHVRAHGEGCWRSLPSAAGLLRCGKSCRLRWINYL 250
Query: 940 RPDLKRGNFTADEDDLIVKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHVRRKLLGRGI 761
RPDLKRGNF+ DED+LIVKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTH+RRKLLGRGI
Sbjct: 251 RPDLKRGNFSRDEDELIVKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHIRRKLLGRGI 430
Query: 760 DPVTHRPIAADAVTVTT 710
DPVTHRP+ A T +
Sbjct: 431 DPVTHRPVTDAAGTTVS 481
Score = 237 bits (513), Expect = 6e-062
Identities = 104/134 (77%), Positives = 109/134 (81%)
Frame = +3 / -1
Query: 720 VTASAAMGRCVTGSMPLPSSFRRTCVFQ*FLISLSVRPGSRAAMSDHLFPRRLCSLTMRS 899
V A++ GRCVTGS+PLPSSF R CVFQ*FLISLSV PG RAAMSDHL PRRL SLTM S
Sbjct: 471 VPAASVTGRCVTGSIPLPSSFLRMCVFQ*FLISLSVLPGRRAAMSDHLLPRRLWSLTMSS 292
Query: 900 SSSAVKLPRFRSGRR*LIHRSRQLLPHRSRPAALGSDRQHPSPCARM*ATXXXXXXLVHA 1079
SSS +KLPR RSGRR*LIH RQLLP RSRPAALGS+RQHPSPCAR AT LVHA
Sbjct: 291 SSSRLKLPRLRSGRR*LIHLRRQLLPQRSRPAALGSERQHPSPCARTWATSRSSSSLVHA 112
Query: 1080 PLLVCAFSQQGDRP 1121
PL VCAFSQ GDRP
Sbjct: 111 PLFVCAFSQHGDRP 70
Score = 84.9 bits (179), Expect(2) = 2e-029
Identities = 36/65 (55%), Positives = 41/65 (63%)
Frame = -1 / +1
Query: 1121 GAVALLREGAHQQGRVDQGGGRAPGGLHPXXXXXXXXXXXXXXXXXXVRQELPAAVDQLP 942
GAVA+LREGAH+QGRVD+GGGRA GG P +RQELP VDQLP
Sbjct: 70 GAVAVLREGAHEQGRVDEGGGRAAGGPRPGARGGVLALAAQRRRPAALRQELPPQVDQLP 249
Query: 941 PARPE 927
P RP+
Sbjct: 250 PPRPQ 264
Score = 64.8 bits (135), Expect(2) = 2e-029
Identities = 27/34 (79%), Positives = 28/34 (82%)
Frame = -1 / +1
Query: 866 EQVVAHRRAAPGADGQRDQELLEHARPAEAAGQG 765
+QVVAHRRA G DGQRDQELLEHA P EAA QG
Sbjct: 325 QQVVAHRRAPAGEDGQRDQELLEHAHPEEAARQG 426
>emb|X70879.1|HVMYB1G H.vulgare Myb1 gene
Length = 2587
Score = 209 bits (451), Expect(5) = 3e-083
Identities = 78/87 (89%), Positives = 85/87 (97%)
Frame = -2 / +3
Query: 1120 GRSPCCEKAHTNRGAWTKEEDERLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYL 941
GRSPCCEKAHTN+GAWTKEED+RL AYI+AHGEGCWRSLPKAAGLLRCGKSCRLRWINYL
Sbjct: 1005 GRSPCCEKAHTNKGAWTKEEDDRLTAYIKAHGEGCWRSLPKAAGLLRCGKSCRLRWINYL 1184
Query: 940 RPDLKRGNFTADEDDLIVKLHSLLGNK 860
RPDLKRGNF+ +ED+LI+KLHSLLGNK
Sbjct: 1185 RPDLKRGNFSHEEDELIIKLHSLLGNK 1265
Score = 142 bits (304), Expect(4) = 2e-045
Identities = 64/88 (72%), Positives = 67/88 (76%)
Frame = +3 / -1
Query: 858 HLFPRRLCSLTMRSSSSAVKLPRFRSGRR*LIHRSRQLLPHRSRPAALGSDRQHPSPCAR 1037
+LFPRRL SL M SSSS +KLPR RSGRR*LI R RQLLP RSRPAALG +RQ PSPCA
Sbjct: 1267 YLFPRRLWSLMMSSSSSWLKLPRLRSGRR*LIQRRRQLLPQRSRPAALGRERQQPSPCAL 1088
Query: 1038 M*ATXXXXXXLVHAPLLVCAFSQQGDRP 1121
M*A LV APLLVCAFSQ GD P
Sbjct: 1087 M*AVSRSSSSLVQAPLLVCAFSQHGDLP 1004
Score = 99.1 bits (210), Expect(5) = 3e-083
Identities = 39/52 (75%), Positives = 42/52 (80%)
Frame = -2 / +2
Query: 883 LHSLLGNKWSLIAARLPGRTDNEIKNYWNTHVRRKLLGRGIDPVTHRPIAAD 728
L L +WSLIA RLPGRTDNEIKNYWNTH+RRKL RGIDPVTHR I +D
Sbjct: 1388 LFLLGARRWSLIAGRLPGRTDNEIKNYWNTHIRRKLTSRGIDPVTHRAINSD 1543
Score = 61.1 bits (127), Expect(4) = 2e-045
Identities = 29/45 (64%), Positives = 32/45 (71%)
Frame = +3 / -2
Query: 729 SAAMGRCVTGSMPLPSSFRRTCVFQ*FLISLSVRPGSRAAMSDHL 863
S + R VTGS+P SF R CVFQ*FLISLSV PGS A+ DHL
Sbjct: 1542 SLLIARWVTGSIPRLVSFLRMCVFQ*FLISLSVLPGSLPAIRDHL 1408
Score = 39.1 bits (79), Expect(5) = 3e-083
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = -2 / +2
Query: 634 RCPDLNLDLCISPP 593
+CPDLNLDLCISPP
Sbjct: 1724 KCPDLNLDLCISPP 1765
Score = 28.1 bits (55), Expect(5) = 3e-083
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = -2 / +2
Query: 409 LGLRGGMLDFRGLKMK* 359
+GLR MLDFR ++MK*
Sbjct: 1901 MGLRTAMLDFRSIEMK* 1951
Score = 24.9 bits (48), Expect(4) = 2e-045
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3 / -2
Query: 588 WHGGLMQRSRLR 623
W GGLM RSR R
Sbjct: 1770 WIGGLMHRSRFR 1735
Score = 22.6 bits (43), Expect(5) = 3e-083
Identities = 6/13 (46%), Positives = 10/13 (76%)
Frame = -2 / +2
Query: 487 LCFGCSLGVQKGA 449
LCF CS+G+ + +
Sbjct: 1841 LCFSCSMGLPRSS 1879
Score = 22.1 bits (42), Expect(4) = 2e-045
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +2 / -1
Query: 353 LRSLHLEASKVQH 391
L S HL+AS+V+H
Sbjct: 1957 LCSFHLDASEVEH 1919
>gb|BG301022.1|BG301022 HVSMEb0019E16f Hordeum vulgare seedling shoot EST library HVcDNA0002
(Dehydration stress) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEb0019E16f, mRNA sequence
Length = 625
Score = 305 bits (660), Expect = 3e-082
Identities = 114/139 (82%), Positives = 129/139 (92%)
Frame = -2 / +2
Query: 1120 GRSPCCEKAHTNRGAWTKEEDERLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYL 941
GRSPCCEKAHTN+GAWTKEED+RL+ YI+AHGEGCWRSLPKAAGLLRCGKSCRLRW+NYL
Sbjct: 83 GRSPCCEKAHTNKGAWTKEEDQRLIGYIKAHGEGCWRSLPKAAGLLRCGKSCRLRWMNYL 262
Query: 940 RPDLKRGNFTADEDDLIVKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHVRRKLLGRGI 761
RPDLKRGNFT D+D+LI+KLH+LLGNKWSLIA +LPGRTDNEIKNYWNTH++RKLL RG+
Sbjct: 263 RPDLKRGNFTDDDDELIIKLHALLGNKWSLIAGQLPGRTDNEIKNYWNTHIKRKLLNRGM 442
Query: 760 DPVTHRPIAADAVTVTTVS 704
DP THRPI+A A + T S
Sbjct: 443 DPHTHRPISAAAASGLTAS 499
Score = 199 bits (429), Expect = 2e-050
Identities = 93/139 (66%), Positives = 100/139 (71%)
Frame = +3 / -2
Query: 705 ETVVTVTASAAMGRCVTGSMPLPSSFRRTCVFQ*FLISLSVRPGSRAAMSDHLFPRRLCS 884
+ V + A+A MGRCV GSMP S R CVFQ*FLISLSVRPGS A++DHL PRR S
Sbjct: 498 DAVSPLAAAALMGRCVCGSMPRLRSLRLMCVFQ*FLISLSVRPGSCPAINDHLLPRRAWS 319
Query: 885 LTMRSSSSAVKLPRFRSGRR*LIHRSRQLLPHRSRPAALGSDRQHPSPCARM*ATXXXXX 1064
L M SSSS+VKLPR RSGRR* I R RQLLP R RPAALGS+RQ PSP A M*
Sbjct: 318 LMMSSSSSSVKLPRLRSGRR*FIQRRRQLLPQRRRPAALGSERQQPSPWALM*PIRRWSS 139
Query: 1065 XLVHAPLLVCAFSQQGDRP 1121
LV APLLVCAFSQ GD P
Sbjct: 138 SLVQAPLLVCAFSQHGDLP 82
>gb|BG301049.1|BG301049 HVSMEb0019G16f Hordeum vulgare seedling shoot EST library HVcDNA0002
(Dehydration stress) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEb0019G16f, mRNA sequence
Length = 624
Score = 305 bits (660), Expect = 3e-082
Identities = 114/139 (82%), Positives = 129/139 (92%)
Frame = -2 / +2
Query: 1120 GRSPCCEKAHTNRGAWTKEEDERLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYL 941
GRSPCCEKAHTN+GAWTKEED+RL+ YI+AHGEGCWRSLPKAAGLLRCGKSCRLRW+NYL
Sbjct: 83 GRSPCCEKAHTNKGAWTKEEDQRLIGYIKAHGEGCWRSLPKAAGLLRCGKSCRLRWMNYL 262
Query: 940 RPDLKRGNFTADEDDLIVKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHVRRKLLGRGI 761
RPDLKRGNFT D+D+LI+KLH+LLGNKWSLIA +LPGRTDNEIKNYWNTH++RKLL RG+
Sbjct: 263 RPDLKRGNFTDDDDELIIKLHALLGNKWSLIAGQLPGRTDNEIKNYWNTHIKRKLLNRGM 442
Query: 760 DPVTHRPIAADAVTVTTVS 704
DP THRPI+A A + T S
Sbjct: 443 DPHTHRPISAAAASGLTAS 499
Score = 199 bits (429), Expect = 2e-050
Identities = 93/139 (66%), Positives = 100/139 (71%)
Frame = +3 / -1
Query: 705 ETVVTVTASAAMGRCVTGSMPLPSSFRRTCVFQ*FLISLSVRPGSRAAMSDHLFPRRLCS 884
+ V + A+A MGRCV GSMP S R CVFQ*FLISLSVRPGS A++DHL PRR S
Sbjct: 498 DAVSPLAAAALMGRCVCGSMPRLRSLRLMCVFQ*FLISLSVRPGSCPAINDHLLPRRAWS 319
Query: 885 LTMRSSSSAVKLPRFRSGRR*LIHRSRQLLPHRSRPAALGSDRQHPSPCARM*ATXXXXX 1064
L M SSSS+VKLPR RSGRR* I R RQLLP R RPAALGS+RQ PSP A M*
Sbjct: 318 LMMSSSSSSVKLPRLRSGRR*FIQRRRQLLPQRRRPAALGSERQQPSPWALM*PIRRWSS 139
Query: 1065 XLVHAPLLVCAFSQQGDRP 1121
LV APLLVCAFSQ GD P
Sbjct: 138 SLVQAPLLVCAFSQHGDLP 82
>gb|BI960347.1|BI960347 HVSMEn0024E22f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0024E22f,
mRNA sequence
Length = 669
Score = 304 bits (658), Expect = 6e-082
Identities = 115/131 (87%), Positives = 124/131 (94%)
Frame = -2 / +3
Query: 1120 GRSPCCEKAHTNRGAWTKEEDERLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYL 941
GRSPCCEKAHTN+GAWTKEED+RL AYI+AHGEGCWRSLPKAAGLLRCGKSCRLRWINYL
Sbjct: 75 GRSPCCEKAHTNKGAWTKEEDDRLTAYIKAHGEGCWRSLPKAAGLLRCGKSCRLRWINYL 254
Query: 940 RPDLKRGNFTADEDDLIVKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHVRRKLLGRGI 761
RPDLKRGNF+ +ED+LI+KLHSLLGNKWSLIA RLPGRTDNEIKNYWNTH+RRKL RGI
Sbjct: 255 RPDLKRGNFSHEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLTSRGI 434
Query: 760 DPVTHRPIAAD 728
DPVTHR I +D
Sbjct: 435 DPVTHRAINSD 467
Score = 194 bits (419), Expect = 6e-049
Identities = 91/131 (69%), Positives = 96/131 (73%)
Frame = +3 / -3
Query: 729 SAAMGRCVTGSMPLPSSFRRTCVFQ*FLISLSVRPGSRAAMSDHLFPRRLCSLTMRSSSS 908
S + R VTGS+P SF R CVFQ*FLISLSV PGS A+ DHL PRRL SL M SSSS
Sbjct: 466 SLLIARWVTGSIPRLVSFLRMCVFQ*FLISLSVLPGSLPAIRDHLLPRRLWSLMMSSSSS 287
Query: 909 AVKLPRFRSGRR*LIHRSRQLLPHRSRPAALGSDRQHPSPCARM*ATXXXXXXLVHAPLL 1088
+KLPR RSGRR*LI R RQLLP RSRPAALG +RQ PSPCA M*A LV APLL
Sbjct: 286 WLKLPRLRSGRR*LIQRRRQLLPQRSRPAALGRERQQPSPCALM*AVSRSSSSLVQAPLL 107
Query: 1089 VCAFSQQGDRP 1121
VCAFSQ GD P
Sbjct: 106 VCAFSQHGDLP 74
>gb|BF617142.2|BF617142 HVSMEc0014M02f Hordeum vulgare seedling shoot EST library HVcDNA0003
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEc0014M02f, mRNA sequence
Length = 771
Score = 279 bits (603), Expect = 2e-074
Identities = 106/128 (82%), Positives = 119/128 (92%)
Frame = -2 / +3
Query: 1120 GRSPCCEKAHTNRGAWTKEEDERLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYL 941
GRSP EK HTN+GAWT EED+RL+AYIRA+GEGCWRSLPKAAGLLRCGKSCRLRW+NYL
Sbjct: 39 GRSPG*EKEHTNKGAWTTEEDQRLIAYIRANGEGCWRSLPKAAGLLRCGKSCRLRWMNYL 218
Query: 940 RPDLKRGNFTADEDDLIVKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHVRRKLLGRGI 761
RPDLKRGNFT D D+LI++LHSLLGNKWSLIA +LPGRTDNEIKNYWNTH++RKLL RG+
Sbjct: 219 RPDLKRGNFTDD*DELIIRLHSLLGNKWSLIAGQLPGRTDNEIKNYWNTHIKRKLLSRGM 398
Query: 760 DPVTHRPI 737
DP THRP+
Sbjct: 399 DPNTHRPL 422
Score = 192 bits (413), Expect = 4e-048
Identities = 88/135 (65%), Positives = 96/135 (71%)
Frame = +3 / -3
Query: 717 TVTASAAMGRCVTGSMPLPSSFRRTCVFQ*FLISLSVRPGSRAAMSDHLFPRRLCSLTMR 896
T + ++ GRCV GS+P S R CVFQ*FLISLSV PGS AM DHL P RLC M
Sbjct: 442 TASMTSVNGRCVFGSIPRDRSLRLMCVFQ*FLISLSVLPGSWPAMRDHLLPSRLCRRMMS 263
Query: 897 SSSSAVKLPRFRSGRR*LIHRSRQLLPHRSRPAALGSDRQHPSPCARM*ATXXXXXXLVH 1076
SS S+VKLPR RSGRR* I R RQLLP RSRPAALGS+RQ PSP A M*A +VH
Sbjct: 262 SS*SSVKLPRLRSGRR*FIQRRRQLLPQRSRPAALGSERQQPSPLALM*AISRWSSSVVH 83
Query: 1077 APLLVCAFSQQGDRP 1121
APLLVC+FSQ GD P
Sbjct: 82 APLLVCSFSQPGDLP 38
>gb|BF064941.1|BF064941 HV_CEb0022A15f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0022A15f, mRNA sequence
Length = 838
Score = 157 bits (338), Expect(3) = 6e-073
Identities = 58/65 (89%), Positives = 61/65 (93%)
Frame = -2 / +3
Query: 1120 GRSPCCEKAHTNRGAWTKEEDERLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYL 941
GRSPCCEKAHTN+GAWT EEDERLVA++RAHGEGCWRSLP A GLLRCGKSCRL WINYL
Sbjct: 183 GRSPCCEKAHTNKGAWTTEEDERLVAHVRAHGEGCWRSLPSADGLLRCGKSCRLTWINYL 362
Query: 940 RPDLK 926
RPDLK
Sbjct: 363 RPDLK 377
Score = 125 bits (268), Expect(3) = 6e-073
Identities = 52/73 (71%), Positives = 57/73 (78%)
Frame = -2 / +1
Query: 937 PDLKRGNFTADEDDLIVKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHVRRKLLGRGID 758
P +R N DED+LIVKLHSLL NKWSLIAARLPGRTDNEIKNYWNTH+ +KLL RG
Sbjct: 367 PTSRRVNLRRDEDELIVKLHSLLRNKWSLIAARLPGRTDNEIKNYWNTHIPKKLLRRGTH 546
Query: 757 PVTHRPIAADAVT 719
VTHRP+ A T
Sbjct: 547 HVTHRPVTDAAGT 585
Score = 115 bits (246), Expect(3) = 1e-050
Identities = 48/64 (75%), Positives = 51/64 (79%)
Frame = +3 / -1
Query: 930 RSGRR*LIHRSRQLLPHRSRPAALGSDRQHPSPCARM*ATXXXXXXLVHAPLLVCAFSQQ 1109
RSGRR*LIH RQLLP RSRP+ALGS+RQHPSPCAR AT +VHAPL VCAFSQ
Sbjct: 373 RSGRR*LIHVRRQLLPQRSRPSALGSERQHPSPCARTWATSRSSSSVVHAPLFVCAFSQH 194
Query: 1110 GDRP 1121
GDRP
Sbjct: 193 GDRP 182
Score = 99.1 bits (210), Expect(3) = 1e-050
Identities = 48/73 (65%), Positives = 52/73 (71%)
Frame = +3 / -3
Query: 720 VTASAAMGRCVTGSMPLPSSFRRTCVFQ*FLISLSVRPGSRAAMSDHLFPRRLCSLTMRS 899
V A++ GRCVT +PL SSF CVFQ*FLISLSV PG RAAMSDHL RRL SLTM S
Sbjct: 584 VPAASVTGRCVTW*VPLRSSFFGMCVFQ*FLISLSVLPGRRAAMSDHLLRRRLWSLTMSS 405
Query: 900 SSSAVKLPRFRSG 938
SSS +K R G
Sbjct: 404 SSSRLKFTRLEVG 366
Score = 83.1 bits (175), Expect(2) = 4e-029
Identities = 36/65 (55%), Positives = 40/65 (61%)
Frame = -1 / +2
Query: 1121 GAVALLREGAHQQGRVDQGGGRAPGGLHPXXXXXXXXXXXXXXXXXXVRQELPAAVDQLP 942
GAVA+LREGAH+QGRVD GGGRA GG P +RQELP VDQLP
Sbjct: 182 GAVAVLREGAHEQGRVDDGGGRAAGGPRPGAR*GVLALAAQRRRSAALRQELPPHVDQLP 361
Query: 941 PARPE 927
P RP+
Sbjct: 362 PPRPQ 376
Score = 65.7 bits (137), Expect(2) = 4e-029
Identities = 27/34 (79%), Positives = 28/34 (82%)
Frame = -1 / +3
Query: 866 EQVVAHRRAAPGADGQRDQELLEHARPAEAAGQG 765
+QVVAHRRA G DGQRDQELLEHA P EAA QG
Sbjct: 438 QQVVAHRRAPAGEDGQRDQELLEHAHPEEAASQG 539
Score = 30.9 bits (61), Expect(3) = 6e-073
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = -2 / +2
Query: 637 PRCPDLNLDLCISPP 593
P PDLNLDLCI+ P
Sbjct: 650 PSAPDLNLDLCINLP 694
Score = 24.4 bits (47), Expect(3) = 1e-050
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3 / -2
Query: 588 WHGGLMQRSRLR 623
W G LM RSRLR
Sbjct: 699 WRGRLMHRSRLR 664
>emb|X70880.1|HVMYB2G H.vulgare Myb2 gene
Length = 1093
Score = 207 bits (447), Expect(2) = 4e-059
Identities = 77/87 (88%), Positives = 85/87 (97%)
Frame = -2 / +1
Query: 1120 GRSPCCEKAHTNRGAWTKEEDERLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYL 941
GRSPCCEK HTN+GAWTKEED+RL+AYIRA+GEGCWRSLPKAAGLLRCGKSCRLRW+NYL
Sbjct: 649 GRSPCCEKEHTNKGAWTKEEDQRLIAYIRANGEGCWRSLPKAAGLLRCGKSCRLRWMNYL 828
Query: 940 RPDLKRGNFTADEDDLIVKLHSLLGNK 860
RPDLKRGNFT DED+LI++LHSLLGNK
Sbjct: 829 RPDLKRGNFTDDEDELIIRLHSLLGNK 909
Score = 134 bits (287), Expect(2) = 2e-032
Identities = 61/88 (69%), Positives = 65/88 (73%)
Frame = +3 / -3
Query: 858 HLFPRRLCSLTMRSSSSAVKLPRFRSGRR*LIHRSRQLLPHRSRPAALGSDRQHPSPCAR 1037
+L PRRL M SSSS+VKLPR RSGRR* I R RQLLP RSRPAALGS+RQ PSP A
Sbjct: 911 YLLPRRLWRRMMSSSSSSVKLPRLRSGRR*FIQRRRQLLPQRSRPAALGSERQQPSPLAL 732
Query: 1038 M*ATXXXXXXLVHAPLLVCAFSQQGDRP 1121
M*A LVHAPLLVC+FSQ GD P
Sbjct: 731 M*AISRWSSSLVHAPLLVCSFSQHGDLP 648
Score = 41.4 bits (84), Expect(2) = 4e-059
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = -2 / +2
Query: 877 SLLGNKWSLIAARLPGRTDNEI 812
SL+ +WSLIA +LPGRTDNEI
Sbjct: 1028 SLVSCRWSLIAGQLPGRTDNEI 1093
Score = 29.0 bits (57), Expect(2) = 2e-032
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = +3 / -2
Query: 813 ISLSVRPGSRAAMSDHL 863
ISLSV PGS AM DHL
Sbjct: 1092 ISLSVLPGSWPAMRDHL 1042
>gb|BF261857.2|BF261857 HV_CEa0002G15f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0002G15f, mRNA sequence
Length = 853
Score = 228 bits (492), Expect = 5e-059
Identities = 86/137 (62%), Positives = 107/137 (78%)
Frame = -2 / +2
Query: 1117 RSPCCEKAHTNRGAWTKEEDERLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLR 938
+ P K RG W+ EEDE+L+ +I +G GCW S+PK AGL RCGKSCRLRWINYLR
Sbjct: 200 KRPGGTKKRLKRGLWSPEEDEKLMNHIAKYGNGCWSSVPKIAGLERCGKSCRLRWINYLR 379
Query: 937 PDLKRGNFTADEDDLIVKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHVRRKLLGRGID 758
PDLKRG F+ +E+DLI+ LHS+LGNKWS IAA+LPGRTDNE+KN+WN+ +++KL RGID
Sbjct: 380 PDLKRGAFSQEEEDLIIHLHSILGNKWSQIAAQLPGRTDNEVKNFWNSFIKKKLRQRGID 559
Query: 757 PVTHRPIAADAVTVTTV 707
P TH+P+ DAV V V
Sbjct: 560 PATHKPLDPDAVAVAAV 610
Score = 118 bits (253), Expect = 5e-026
Identities = 62/111 (55%), Positives = 66/111 (59%)
Frame = +3 / -2
Query: 708 TVVTVTASAAMGRCVTGSMPLPSSFRRTCVFQ*FLISLSVRPGSRAAMSDHLFPRRLCSL 887
T T TAS + G V GSMP SF FQ FL SLSVRPGS AA+ DHL PR
Sbjct: 609 TAATATASGSSGLWVAGSMPRWRSFFLMKEFQKFLTSLSVRPGSCAAI*DHLLPRMEXRW 430
Query: 888 TMRSSSSAVKLPRFRSGRR*LIHRSRQLLPHRSRPAALGSDRQHPSPCARM 1040
MRSSSS K P RSG R* IH S QL PH SRPA LG++ Q P P M
Sbjct: 429 MMRSSSSCEKAPLLRSGLR*FIHLSLQLFPHLSRPAILGTELQQPLPYLAM 277
>gb|BI958189.1|BI958189 HVSMEn0013M24f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0013M24f,
mRNA sequence
Length = 471
Score = 226 bits (489), Expect = 1e-058
Identities = 87/102 (85%), Positives = 94/102 (92%)
Frame = -2 / +1
Query: 1120 GRSPCCEKAHTNRGAWTKEEDERLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYL 941
G +KAHTN+GAWTKEED+RLVAYI+AHGEGCWRSLPKAAGLLRCGKSCRLRWINYL
Sbjct: 166 GGPRAAKKAHTNKGAWTKEEDQRLVAYIKAHGEGCWRSLPKAAGLLRCGKSCRLRWINYL 345
Query: 940 RPDLKRGNFTADEDDLIVKLHSLLGNKWSLIAARLPGRTDNE 815
RPDLKRGNFT +ED+LI+KLH LLGNKWSLIA RLPGRTDNE
Sbjct: 346 RPDLKRGNFTEEEDELIIKLHELLGNKWSLIAGRLPGRTDNE 471
Score = 138 bits (295), Expect = 7e-032
Identities = 66/95 (69%), Positives = 67/95 (70%)
Frame = +3 / -2
Query: 816 SLSVRPGSRAAMSDHLFPRRLCSLTMRSSSSAVKLPRFRSGRR*LIHRSRQLLPHRSRPA 995
SLSV PGS AMSDHL P SL M SSSS+VK PR RSG R*LIHRS QL PHRS PA
Sbjct: 470 SLSVLPGSLPAMSDHLLPSSSWSLMMSSSSSSVKFPRLRSGLR*LIHRSLQLFPHRSSPA 291
Query: 996 ALGSDRQHPSPCARM*ATXXXXXXLVHAPLLVCAF 1100
ALG D Q PSP A M*AT LV APLLVCAF
Sbjct: 290 ALGRDLQQPSPWALM*ATRRWSSSLVQAPLLVCAF 186
>gb|CA019195.1|CA019195 HV11C18r HV Hordeum vulgare subsp. vulgare cDNA clone HV11C18
5-PRIME, mRNA sequence
Length = 583
Score = 209 bits (450), Expect(2) = 4e-058
Identities = 81/93 (87%), Positives = 87/93 (93%)
Frame = -2 / +2
Query: 1006 LPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTADEDDLIVKLHSLLGNKWSLIAARLPGR 827
LPKAAGLLRCGKSCRLRWINYLRPDLKRGNF+ +ED+LI+KLHSLLGNKWSLIA RLPGR
Sbjct: 11 LPKAAGLLRCGKSCRLRWINYLRPDLKRGNFSHEEDELIIKLHSLLGNKWSLIAGRLPGR 190
Query: 826 TDNEIKNYWNTHVRRKLLGRGIDPVTHRPIAAD 728
TDNEIKNYWNTH+RRKL RGIDPVTHR I +D
Sbjct: 191 TDNEIKNYWNTHIRRKLTSRGIDPVTHRAINSD 289
Score = 139 bits (298), Expect(2) = 5e-033
Identities = 67/93 (72%), Positives = 71/93 (76%)
Frame = +3 / -2
Query: 729 SAAMGRCVTGSMPLPSSFRRTCVFQ*FLISLSVRPGSRAAMSDHLFPRRLCSLTMRSSSS 908
S + R VTGS+P SF R CVFQ*FLISLSV PGS A+ DHL PRRL SL M SSSS
Sbjct: 288 SLLIARWVTGSIPRLVSFLRMCVFQ*FLISLSVLPGSLPAIRDHLLPRRLWSLMMSSSSS 109
Query: 909 AVKLPRFRSGRR*LIHRSRQLLPHRSRPAALGS 1007
+KLPR RSGRR*LI R RQLLP RSRPAALGS
Sbjct: 108 WLKLPRLRSGRR*LIQRRRQLLPQRSRPAALGS 10
Score = 39.1 bits (79), Expect(2) = 4e-058
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = -2 / +2
Query: 634 RCPDLNLDLCISPP 593
+CPDLNLDLCISPP
Sbjct: 470 KCPDLNLDLCISPP 511
Score = 24.9 bits (48), Expect(2) = 5e-033
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3 / -2
Query: 588 WHGGLMQRSRLR 623
W GGLM RSR R
Sbjct: 516 WIGGLMHRSRFR 481
>gb|BI959020.1|BI959020 HVSMEn0017M09f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0017M09f,
mRNA sequence
Length = 656
Score = 224 bits (483), Expect = 9e-058
Identities = 83/142 (58%), Positives = 105/142 (73%)
Frame = -2 / +1
Query: 1120 GRSPCCEKAHTNRGAWTKEEDERLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYL 941
GR PCCEK + RG WT EED +L++YI HG WR +PK AGL RCGKSCRLRW NYL
Sbjct: 16 GRIPCCEKDNVKRGQWTPEEDNKLLSYITQHGTRNWRLIPKNAGLQRCGKSCRLRWTNYL 195
Query: 940 RPDLKRGNFTADEDDLIVKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHVRRKLLGRGI 761
RPDLK G FT E+ I+KLHS++GN+WS+IAA+LPGRTDN++KN+WNT +++KL G GI
Sbjct: 196 RPDLKHGEFTDAEEQTIIKLHSVVGNRWSVIAAQLPGRTDNDVKNHWNTKLKKKLSGMGI 375
Query: 760 DPVTHRPIAADAVTVTTVSFQP 695
DP+TH+ + + T P
Sbjct: 376 DPITHKSFSHLMAEIATTLAPP 441
Score = 149 bits (319), Expect = 4e-035
Identities = 70/125 (56%), Positives = 79/125 (63%)
Frame = +3 / -1
Query: 747 CVTGSMPLPSSFRRTCVFQ*FLISLSVRPGSRAAMSDHLFPRRLCSLTMRSSSSAVKLPR 926
CV GSMP+P SF + VFQ FL SLSVRPGS AA++DHL P CSL M SS++V P
Sbjct: 389 CVMGSMPIPDSFFLSLVFQWFLTSLSVRPGSWAAITDHLLPTTECSLMMVCSSASVNSPC 210
Query: 927 FRSGRR*LIHRSRQLLPHRSRPAALGSDRQHPSPCARM*ATXXXXXXLVHAPLLVCAFSQ 1106
RSGRR*L+HR RQL P R PA LG RQ PC M* + VH P +FSQ
Sbjct: 209 LRSGRR*LVHRRRQLFPQRCSPAFLGMRRQLRVPCCVM*ESSLLSSSGVHCPRFTLSFSQ 30
Query: 1107 QGDRP 1121
QG RP
Sbjct: 29 QGIRP 15
>gb|BF620286.3|BF620286 HVSMEc0019F08f Hordeum vulgare seedling shoot EST library HVcDNA0003
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEc0019F08f, mRNA sequence
Length = 690
Score = 223 bits (482), Expect = 1e-057
Identities = 81/126 (64%), Positives = 99/126 (78%)
Frame = -2 / +2
Query: 1120 GRSPCCEKAHTNRGAWTKEEDERLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYL 941
GRSPCC+K +G WT EEDE+L+A+I HG G WR+LP AGL RCGKSCRLRW NYL
Sbjct: 26 GRSPCCDKVGLKKGPWTTEEDEKLLAHIEEHGHGSWRALPSKAGLQRCGKSCRLRWTNYL 205
Query: 940 RPDLKRGNFTADEDDLIVKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHVRRKLLGRGI 761
RPD+KRG F+ E+ I++LH+LLGN+WS IA L RTDNEIKNYWNTH++++L GI
Sbjct: 206 RPDIKRGKFSLQEEQTIIQLHALLGNRWSAIATHLSRRTDNEIKNYWNTHLKKRLAKMGI 385
Query: 760 DPVTHR 743
DPVTH+
Sbjct: 386 DPVTHK 403
Score = 129 bits (277), Expect = 2e-029
Identities = 64/124 (51%), Positives = 74/124 (59%)
Frame = +3 / -1
Query: 750 VTGSMPLPSSFRRTCVFQ*FLISLSVRPGSRAAMSDHLFPRRLCSLTMRSSSSAVKLPRF 929
VTGS+P+ +S VFQ*FLISLSVR AM+DHL PRR S M SS + LP
Sbjct: 396 VTGSIPILASLFLRWVFQ*FLISLSVRLDRCVAMADHLLPRRA*SWMMVCSSCRLNLPLL 217
Query: 930 RSGRR*LIHRSRQLLPHRSRPAALGSDRQHPSPCARM*ATXXXXXXLVHAPLLVCAFSQQ 1109
SGRR*L+H S QLLPH +PA G+ RQ P PC+ M A +VH P SQ
Sbjct: 216 MSGRR*LVHLSLQLLPHLCKPALEGNARQLPCPCSSMWARSFSSSSVVHGPFFRPTLSQH 37
Query: 1110 GDRP 1121
GDRP
Sbjct: 36 GDRP 25
>gb|BF259477.2|BF259477 HVSMEf0019D12f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEf0019D12f, mRNA sequence
Length = 577
Score = 222 bits (479), Expect = 3e-057
Identities = 80/127 (62%), Positives = 103/127 (81%)
Frame = -2 / +3
Query: 1120 GRSPCCEKAHTNRGAWTKEEDERLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYL 941
GR P ++ +G WT EEDE+L++YI+ HG G WR+LP+ AGL RCGKSCRLRW NYL
Sbjct: 87 GRPPSSDENGLKKGPWTSEEDEKLMSYIQKHGHGSWRALPQLAGLNRCGKSCRLRWTNYL 266
Query: 940 RPDLKRGNFTADEDDLIVKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHVRRKLLGRGI 761
+PD+KRG F+ +E+ I++LH++LGNKWS IA LPGRTDNEIKN+WNTH+R+KL+ GI
Sbjct: 267 KPDIKRGKFSQEEEQTILQLHTVLGNKWSAIAKHLPGRTDNEIKNFWNTHLRKKLIKMGI 446
Query: 760 DPVTHRP 740
DP+THRP
Sbjct: 447 DPMTHRP 467
Score = 120 bits (257), Expect = 1e-026
Identities = 64/130 (49%), Positives = 73/130 (56%)
Frame = +3 / -1
Query: 732 AAMGRCVTGSMPLPSSFRRTCVFQ*FLISLSVRPGSRAAMSDHLFPRRLCSLTMRSSSSA 911
+ +GR V GSMP+ SF VFQ FLISLSVRPG A++DHL PR +CS M SSS
Sbjct: 475 SVLGRWVIGSMPILMSFFLRWVFQKFLISLSVRPGRCFAIADHLLPRTVCSWRMVCSSSW 296
Query: 912 VKLPRFRSGRR*LIHRSRQLLPHRSRPAALGSDRQHPSPCARM*ATXXXXXXLVHAPLLV 1091
P SG R*L+H S QLLPH RPA+ G Q P PC M* LV P L
Sbjct: 295 ENFPLLMSGFR*LVHLSLQLLPHLFRPAS*GRALQLPWPCFWM*LMSFSSSSLVQGPFLR 116
Query: 1092 CAFSQQGDRP 1121
S +G P
Sbjct: 115 PFSSLEGGLP 86
>gb|BM816803.1|BM816803 HC114B11_SK.ab1 HC Hordeum vulgare subsp. vulgare cDNA clone
HC114B11_SK.ab1 similar to myb protein homolog - rice
gi|1946265|emb|CAA72217.1| (Y11414) myb [Oryza sativa],
mRNA sequence
Length = 879
Score = 220 bits (475), Expect = 1e-056
Identities = 81/115 (70%), Positives = 97/115 (84%)
Frame = -2 / +2
Query: 1120 GRSPCCEKAHTNRGAWTKEEDERLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYL 941
GRSPCCEK RG WT EED LVA+I HG WR+LP AGLLRCGKSCRLRWINYL
Sbjct: 167 GRSPCCEKMGLKRGPWTAEEDMTLVAHIEQHGHSNWRALPNQAGLLRCGKSCRLRWINYL 346
Query: 940 RPDLKRGNFTADEDDLIVKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHVRRKL 776
RPD+KRGNFT++E+D I++LH++LGN+WS IAARLPGRTDNEIKN W+TH++++L
Sbjct: 347 RPDIKRGNFTSEEEDAIIQLHAMLGNRWSTIAARLPGRTDNEIKNVWHTHLKKRL 511
Score = 144 bits (310), Expect = 6e-034
Identities = 72/110 (65%), Positives = 72/110 (65%)
Frame = +3 / -1
Query: 792 CVFQ*FLISLSVRPGSRAAMSDHLFPRRLCSLTMRSSSSAVKLPRFRSGRR*LIHRSRQL 971
CV Q FLISLSV PGS AAM DHL P S M SSSS VKLPR SGRR*LIHR RQL
Sbjct: 495 CVCQTFLISLSVLPGSLAAMVDHLLPSMAWSWMMASSSSLVKLPRLMSGRR*LIHRRRQL 316
Query: 972 LPHRSRPAALGSDRQHPSPCARM*ATXXXXXXLVHAPLLVCAFSQQGDRP 1121
LP RSRPA GS RQ PC M*AT VH PLL FSQQGD P
Sbjct: 315 LPQRSRPA*FGSARQLLWPCCSM*ATRVMSSSAVHGPLLSPIFSQQGDLP 166
>gb|BG300704.1|BG300704 HVSMEb0018B03f Hordeum vulgare seedling shoot EST library HVcDNA0002
(Dehydration stress) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEb0018B03f, mRNA sequence
Length = 609
Score = 219 bits (473), Expect = 2e-056
Identities = 81/115 (70%), Positives = 98/115 (85%)
Frame = -2 / +1
Query: 1120 GRSPCCEKAHTNRGAWTKEEDERLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYL 941
GR+PCCEK RG WT EED+ LVA+I +HG G WR+LPK AGLLRCGKSCRLRWINYL
Sbjct: 133 GRAPCCEKMGLKRGPWTPEEDKILVAHIHSHGHGNWRALPKQAGLLRCGKSCRLRWINYL 312
Query: 940 RPDLKRGNFTADEDDLIVKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHVRRKL 776
RPD+KRGNF+ +E+ I++LH LLGN+WS IAARLPGRTDNEIKN W+TH++++L
Sbjct: 313 RPDIKRGNFSDEEEQSIIQLHQLLGNRWSAIAARLPGRTDNEIKNVWHTHLKKRL 477
Score = 124 bits (265), Expect = 1e-027
Identities = 62/105 (59%), Positives = 66/105 (62%)
Frame = +3 / -2
Query: 807 FLISLSVRPGSRAAMSDHLFPRRLCSLTMRSSSSAVKLPRFRSGRR*LIHRSRQLLPHRS 986
FLISLSV PGS AA++DHL P CS + SSS+ KLPR SGRR*LIHRSRQLLPHR
Sbjct: 446 FLISLSVLPGSLAAIADHLLPSSWCSWMIDCSSSSEKLPRLMSGRR*LIHRSRQLLPHRR 267
Query: 987 RPAALGSDRQHPSPCARM*ATXXXXXXLVHAPLLVCAFSQQGDRP 1121
PA LGS RQ P P M AT V PL FSQ G P
Sbjct: 266 SPACLGSARQLPWPWLWMCATRILSSSGVQGPLFRPIFSQHGALP 132
>gb|BE559390.2|BE559390 HV_CEb0024H06f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0024H06f, mRNA sequence
Length = 906
Score = 219 bits (473), Expect = 2e-056
Identities = 81/115 (70%), Positives = 98/115 (85%)
Frame = -2 / +2
Query: 1120 GRSPCCEKAHTNRGAWTKEEDERLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYL 941
GR+PCCEK RG WT EED+ LVA+I +HG G WR+LPK AGLLRCGKSCRLRWINYL
Sbjct: 128 GRAPCCEKMGLKRGPWTPEEDKILVAHIHSHGHGNWRALPKQAGLLRCGKSCRLRWINYL 307
Query: 940 RPDLKRGNFTADEDDLIVKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHVRRKL 776
RPD+KRGNF+ +E+ I++LH LLGN+WS IAARLPGRTDNEIKN W+TH++++L
Sbjct: 308 RPDIKRGNFSDEEEQSIIQLHQLLGNRWSAIAARLPGRTDNEIKNVWHTHLKKRL 472
Score = 124 bits (265), Expect = 1e-027
Identities = 62/105 (59%), Positives = 66/105 (62%)
Frame = +3 / -1
Query: 807 FLISLSVRPGSRAAMSDHLFPRRLCSLTMRSSSSAVKLPRFRSGRR*LIHRSRQLLPHRS 986
FLISLSV PGS AA++DHL P CS + SSS+ KLPR SGRR*LIHRSRQLLPHR
Sbjct: 441 FLISLSVLPGSLAAIADHLLPSSWCSWMIDCSSSSEKLPRLMSGRR*LIHRSRQLLPHRR 262
Query: 987 RPAALGSDRQHPSPCARM*ATXXXXXXLVHAPLLVCAFSQQGDRP 1121
PA LGS RQ P P M AT V PL FSQ G P
Sbjct: 261 SPACLGSARQLPWPWLWMCATRILSSSGVQGPLFRPIFSQHGALP 127
>gb|BF617565.3|BF617565 HVSMEc0018A12f Hordeum vulgare seedling shoot EST library HVcDNA0003
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEc0018A12f, mRNA sequence
Length = 777
Score = 219 bits (473), Expect = 2e-056
Identities = 81/115 (70%), Positives = 98/115 (85%)
Frame = -2 / +1
Query: 1120 GRSPCCEKAHTNRGAWTKEEDERLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYL 941
GR+PCCEK RG WT EED+ LVA+I +HG G WR+LPK AGLLRCGKSCRLRWINYL
Sbjct: 118 GRAPCCEKMGLKRGPWTPEEDKILVAHIHSHGHGNWRALPKQAGLLRCGKSCRLRWINYL 297
Query: 940 RPDLKRGNFTADEDDLIVKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHVRRKL 776
RPD+KRGNF+ +E+ I++LH LLGN+WS IAARLPGRTDNEIKN W+TH++++L
Sbjct: 298 RPDIKRGNFSDEEEQSIIQLHQLLGNRWSAIAARLPGRTDNEIKNVWHTHLKKRL 462
Score = 124 bits (265), Expect = 1e-027
Identities = 62/105 (59%), Positives = 66/105 (62%)
Frame = +3 / -2
Query: 807 FLISLSVRPGSRAAMSDHLFPRRLCSLTMRSSSSAVKLPRFRSGRR*LIHRSRQLLPHRS 986
FLISLSV PGS AA++DHL P CS + SSS+ KLPR SGRR*LIHRSRQLLPHR
Sbjct: 431 FLISLSVLPGSLAAIADHLLPSSWCSWMIDCSSSSEKLPRLMSGRR*LIHRSRQLLPHRR 252
Query: 987 RPAALGSDRQHPSPCARM*ATXXXXXXLVHAPLLVCAFSQQGDRP 1121
PA LGS RQ P P M AT V PL FSQ G P
Sbjct: 251 SPACLGSARQLPWPWLWMCATRILSSSGVQGPLFRPIFSQHGALP 117
>gb|BM371065.2|BM371065 EBro04_SQ003_G02_R root, 3 week, salt-stressed, cv Optic, EBro04
Hordeum vulgare subsp. vulgare cDNA clone
EBro04_SQ003_G02 5', mRNA sequence
Length = 604
Score = 219 bits (473), Expect = 2e-056
Identities = 81/115 (70%), Positives = 98/115 (85%)
Frame = -2 / +2
Query: 1120 GRSPCCEKAHTNRGAWTKEEDERLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYL 941
GR+PCCEK RG WT EED+ LVA+I +HG G WR+LPK AGLLRCGKSCRLRWINYL
Sbjct: 134 GRAPCCEKMGLKRGPWTPEEDKILVAHIHSHGHGNWRALPKQAGLLRCGKSCRLRWINYL 313
Query: 940 RPDLKRGNFTADEDDLIVKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHVRRKL 776
RPD+KRGNF+ +E+ I++LH LLGN+WS IAARLPGRTDNEIKN W+TH++++L
Sbjct: 314 RPDIKRGNFSDEEEQSIIQLHQLLGNRWSAIAARLPGRTDNEIKNVWHTHLKKRL 478
Score = 124 bits (265), Expect = 1e-027
Identities = 62/105 (59%), Positives = 66/105 (62%)
Frame = +3 / -2
Query: 807 FLISLSVRPGSRAAMSDHLFPRRLCSLTMRSSSSAVKLPRFRSGRR*LIHRSRQLLPHRS 986
FLISLSV PGS AA++DHL P CS + SSS+ KLPR SGRR*LIHRSRQLLPHR
Sbjct: 447 FLISLSVLPGSLAAIADHLLPSSWCSWMIDCSSSSEKLPRLMSGRR*LIHRSRQLLPHRR 268
Query: 987 RPAALGSDRQHPSPCARM*ATXXXXXXLVHAPLLVCAFSQQGDRP 1121
PA LGS RQ P P M AT V PL FSQ G P
Sbjct: 267 SPACLGSARQLPWPWLWMCATRILSSSGVQGPLFRPIFSQHGALP 133
>gb|BM371066.2|BM371066 EBro04_SQ003_G03_R root, 3 week, salt-stressed, cv Optic, EBro04
Hordeum vulgare subsp. vulgare cDNA clone
EBro04_SQ003_G03 5', mRNA sequence
Length = 501
Score = 219 bits (473), Expect = 2e-056
Identities = 81/115 (70%), Positives = 98/115 (85%)
Frame = -2 / +2
Query: 1120 GRSPCCEKAHTNRGAWTKEEDERLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYL 941
GR+PCCEK RG WT EED+ LVA+I +HG G WR+LPK AGLLRCGKSCRLRWINYL
Sbjct: 134 GRAPCCEKMGLKRGPWTPEEDKILVAHIHSHGHGNWRALPKQAGLLRCGKSCRLRWINYL 313
Query: 940 RPDLKRGNFTADEDDLIVKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHVRRKL 776
RPD+KRGNF+ +E+ I++LH LLGN+WS IAARLPGRTDNEIKN W+TH++++L
Sbjct: 314 RPDIKRGNFSDEEEQSIIQLHQLLGNRWSAIAARLPGRTDNEIKNVWHTHLKKRL 478
Score = 124 bits (265), Expect = 1e-027
Identities = 62/105 (59%), Positives = 66/105 (62%)
Frame = +3 / -1
Query: 807 FLISLSVRPGSRAAMSDHLFPRRLCSLTMRSSSSAVKLPRFRSGRR*LIHRSRQLLPHRS 986
FLISLSV PGS AA++DHL P CS + SSS+ KLPR SGRR*LIHRSRQLLPHR
Sbjct: 447 FLISLSVLPGSLAAIADHLLPSSWCSWMIDCSSSSEKLPRLMSGRR*LIHRSRQLLPHRR 268
Query: 987 RPAALGSDRQHPSPCARM*ATXXXXXXLVHAPLLVCAFSQQGDRP 1121
PA LGS RQ P P M AT V PL FSQ G P
Sbjct: 267 SPACLGSARQLPWPWLWMCATRILSSSGVQGPLFRPIFSQHGALP 133
>gb|BQ763917.1|BQ763917 EBro03_SQ005_C21_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ005_C21 5', mRNA sequence
Length = 681
Score = 219 bits (473), Expect = 2e-056
Identities = 81/115 (70%), Positives = 98/115 (85%)
Frame = -2 / +2
Query: 1120 GRSPCCEKAHTNRGAWTKEEDERLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYL 941
GR+PCCEK RG WT EED+ LVA+I +HG G WR+LPK AGLLRCGKSCRLRWINYL
Sbjct: 122 GRAPCCEKMGLKRGPWTPEEDKILVAHIHSHGHGNWRALPKQAGLLRCGKSCRLRWINYL 301
Query: 940 RPDLKRGNFTADEDDLIVKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHVRRKL 776
RPD+KRGNF+ +E+ I++LH LLGN+WS IAARLPGRTDNEIKN W+TH++++L
Sbjct: 302 RPDIKRGNFSDEEEQSIIQLHQLLGNRWSAIAARLPGRTDNEIKNVWHTHLKKRL 466
Score = 124 bits (265), Expect = 1e-027
Identities = 62/105 (59%), Positives = 66/105 (62%)
Frame = +3 / -1
Query: 807 FLISLSVRPGSRAAMSDHLFPRRLCSLTMRSSSSAVKLPRFRSGRR*LIHRSRQLLPHRS 986
FLISLSV PGS AA++DHL P CS + SSS+ KLPR SGRR*LIHRSRQLLPHR
Sbjct: 435 FLISLSVLPGSLAAIADHLLPSSWCSWMIDCSSSSEKLPRLMSGRR*LIHRSRQLLPHRR 256
Query: 987 RPAALGSDRQHPSPCARM*ATXXXXXXLVHAPLLVCAFSQQGDRP 1121
PA LGS RQ P P M AT V PL FSQ G P
Sbjct: 255 SPACLGSARQLPWPWLWMCATRILSSSGVQGPLFRPIFSQHGALP 121
>gb|CA032540.1|CA032540 HX13G05r HX Hordeum vulgare subsp. vulgare cDNA clone HX13G05
5-PRIME, mRNA sequence
Length = 639
Score = 219 bits (473), Expect = 2e-056
Identities = 81/115 (70%), Positives = 98/115 (85%)
Frame = -2 / +3
Query: 1120 GRSPCCEKAHTNRGAWTKEEDERLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYL 941
GR+PCCEK RG WT EED+ LVA+I +HG G WR+LPK AGLLRCGKSCRLRWINYL
Sbjct: 135 GRAPCCEKMGLKRGPWTPEEDKILVAHIHSHGHGNWRALPKQAGLLRCGKSCRLRWINYL 314
Query: 940 RPDLKRGNFTADEDDLIVKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHVRRKL 776
RPD+KRGNF+ +E+ I++LH LLGN+WS IAARLPGRTDNEIKN W+TH++++L
Sbjct: 315 RPDIKRGNFSDEEEQSIIQLHQLLGNRWSAIAARLPGRTDNEIKNVWHTHLKKRL 479
Score = 124 bits (265), Expect = 1e-027
Identities = 62/105 (59%), Positives = 66/105 (62%)
Frame = +3 / -3
Query: 807 FLISLSVRPGSRAAMSDHLFPRRLCSLTMRSSSSAVKLPRFRSGRR*LIHRSRQLLPHRS 986
FLISLSV PGS AA++DHL P CS + SSS+ KLPR SGRR*LIHRSRQLLPHR
Sbjct: 448 FLISLSVLPGSLAAIADHLLPSSWCSWMIDCSSSSEKLPRLMSGRR*LIHRSRQLLPHRR 269
Query: 987 RPAALGSDRQHPSPCARM*ATXXXXXXLVHAPLLVCAFSQQGDRP 1121
PA LGS RQ P P M AT V PL FSQ G P
Sbjct: 268 SPACLGSARQLPWPWLWMCATRILSSSGVQGPLFRPIFSQHGALP 134
>gb|BE558747.2|BE558747 HV_CEb0020E02f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0020E02f, mRNA sequence
Length = 796
Score = 219 bits (472), Expect = 3e-056
Identities = 82/115 (71%), Positives = 95/115 (82%)
Frame = -2 / +1
Query: 1120 GRSPCCEKAHTNRGAWTKEEDERLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYL 941
GR+PCCEK RG WT EED+ L YI HGEG WRSLPK AGLLRCGKSCRLRWINYL
Sbjct: 214 GRAPCCEKVGLKRGRWTAEEDDILANYIAQHGEGSWRSLPKNAGLLRCGKSCRLRWINYL 393
Query: 940 RPDLKRGNFTADEDDLIVKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHVRRKL 776
R ++RGN + +EDDLIVKLH+ LGN+WSLIA+ LPGRTDNEIKNYWN+H+ R++
Sbjct: 394 RDGVRRGNISKEEDDLIVKLHATLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQI 558
Score = 122 bits (261), Expect = 4e-027
Identities = 62/108 (57%), Positives = 63/108 (58%)
Frame = +3 / -3
Query: 798 FQ*FLISLSVRPGSRAAMSDHLFPRRLCSLTMRSSSSAVKLPRFRSGRR*LIHRSRQLLP 977
FQ*FLISLSVRPG A+ DHL PR SLTMRSSSS LP R*LIHRS QLLP
Sbjct: 536 FQ*FLISLSVRPGRWLAIRDHLLPRVA*SLTMRSSSSLEMLPLLTPSLR*LIHRSLQLLP 357
Query: 978 HRSRPAALGSDRQHPSPCARM*ATXXXXXXLVHAPLLVCAFSQQGDRP 1121
H S PA LG D PSPC M* VH P FSQ G P
Sbjct: 356 HLSSPAFLGRDLHEPSPCWAM*FASMSSSSAVHLPRFSPTFSQHGALP 213
>gb|BG343209.2|BG343209 HVSMEg0005B14f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0005B14f, mRNA sequence
Length = 935
Score = 218 bits (471), Expect = 4e-056
Identities = 81/115 (70%), Positives = 97/115 (84%)
Frame = -2 / +3
Query: 1120 GRSPCCEKAHTNRGAWTKEEDERLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYL 941
GR+PCCEK RG WT EED+ LVA+I HG G WR+LPK AGLLRCGKSCRLRWINYL
Sbjct: 132 GRAPCCEKMGLKRGPWTPEEDKILVAHIHRHGHGNWRALPKQAGLLRCGKSCRLRWINYL 311
Query: 940 RPDLKRGNFTADEDDLIVKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHVRRKL 776
RPD+KRGNF+ +E+ I++LH LLGN+WS IAARLPGRTDNEIKN W+TH++++L
Sbjct: 312 RPDIKRGNFSDEEEQSIIQLHQLLGNRWSAIAARLPGRTDNEIKNVWHTHLKKRL 476
Score = 129 bits (276), Expect = 3e-029
Identities = 63/105 (60%), Positives = 67/105 (63%)
Frame = +3 / -2
Query: 807 FLISLSVRPGSRAAMSDHLFPRRLCSLTMRSSSSAVKLPRFRSGRR*LIHRSRQLLPHRS 986
FLISLSV PGS AA++DHL P CS + SSS+ KLPR SGRR*LIHRSRQLLPHR
Sbjct: 445 FLISLSVLPGSLAAIADHLLPSSWCSWMIDCSSSSEKLPRLMSGRR*LIHRSRQLLPHRR 266
Query: 987 RPAALGSDRQHPSPCARM*ATXXXXXXLVHAPLLVCAFSQQGDRP 1121
PA LGS RQ P PC M AT V PL FSQ G P
Sbjct: 265 SPACLGSARQLPWPCLWMCATRILSSSGVQGPLFRPIFSQHGALP 131
>gb|BM443626.2|BM443626 EBro02_SQ005_P07_R root, 3 week, hydroponic grown, low nitrogen, cv
Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone
EBro02_SQ005_P07 5', mRNA sequence
Length = 523
Score = 215 bits (465), Expect = 3e-055
Identities = 80/115 (69%), Positives = 96/115 (83%)
Frame = -2 / +2
Query: 1120 GRSPCCEKAHTNRGAWTKEEDERLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYL 941
GRSPC EK RG WT EED LVA+I HG WR+LP AGLLRCGKSCRLRWINYL
Sbjct: 137 GRSPCSEKMGLKRGPWTAEEDMTLVAHIEQHGHSNWRALPNQAGLLRCGKSCRLRWINYL 316
Query: 940 RPDLKRGNFTADEDDLIVKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHVRRKL 776
RPD+KRGNFT++E+D I++LH++LGN+WS IAARLPGRTDNEIKN W+TH++++L
Sbjct: 317 RPDIKRGNFTSEEEDAIIQLHAMLGNRWSTIAARLPGRTDNEIKNVWHTHLKKRL 481
Score = 143 bits (307), Expect = 2e-033
Identities = 71/110 (64%), Positives = 72/110 (65%)
Frame = +3 / -2
Query: 792 CVFQ*FLISLSVRPGSRAAMSDHLFPRRLCSLTMRSSSSAVKLPRFRSGRR*LIHRSRQL 971
CV Q FLISLSV PGS AAM DHL P S M SSSS VKLPR SGRR*LIHR RQL
Sbjct: 465 CVCQTFLISLSVLPGSLAAMVDHLLPSMAWSWMMASSSSLVKLPRLMSGRR*LIHRRRQL 286
Query: 972 LPHRSRPAALGSDRQHPSPCARM*ATXXXXXXLVHAPLLVCAFSQQGDRP 1121
LP RSRPA GS RQ PC M*AT VH PLL FS+QGD P
Sbjct: 285 LPQRSRPA*FGSARQLLWPCCSM*ATRVMSSSAVHGPLLSPIFSEQGDLP 136
>gb|CK123641.1|CK123641 BES1824104m18 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010M184 5-PRIME, mRNA sequence
Length = 506
Score = 214 bits (461), Expect = 9e-055
Identities = 81/114 (71%), Positives = 93/114 (81%)
Frame = -2 / +1
Query: 1120 GRSPCCEKAHTNRGAWTKEEDERLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYL 941
GR PCC K NRGAWT ED+ LV+YI HGEG W SLPK AGL RCGKSCRLRW+NYL
Sbjct: 28 GRKPCCSKEGLNRGAWTAMEDDILVSYINEHGEGKWGSLPKRAGLNRCGKSCRLRWLNYL 207
Query: 940 RPDLKRGNFTADEDDLIVKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHVRRK 779
RP +KRGN + DE++LIV+LH LLGN+WSLIA RLPGRTDNEIKNYWNT + ++
Sbjct: 208 RPGIKRGNISDDEEELIVRLHRLLGNRWSLIAGRLPGRTDNEIKNYWNTTLSKR 369
Score = 131 bits (280), Expect = 9e-030
Identities = 65/109 (59%), Positives = 69/109 (63%)
Frame = +3 / -1
Query: 795 VFQ*FLISLSVRPGSRAAMSDHLFPRRLCSLTMRSSSSAVKLPRFRSGRR*LIHRSRQLL 974
VFQ*FLISLSVRPGSR A+SDHL P L SLTM SSSS+ LP GRR*L HRSRQL
Sbjct: 353 VFQ*FLISLSVRPGSRPAISDHLLPSNLWSLTMSSSSSSEMLPLLIPGRR*LSHRSRQLF 174
Query: 975 PHRSRPAALGSDRQHPSPCARM*ATXXXXXXLVHAPLLVCAFSQQGDRP 1121
PH PA LG PSPC+ M* T VHAPL + Q G P
Sbjct: 173 PHLFSPARLGRLPHLPSPCSLM*ETRMSSSIAVHAPLFRPSLEQHGFLP 27
>gb|BI946875.1|BI946875 HVSMEl0002J21f Hordeum vulgare spike EST library HVcDNA0012 (Fusarium
infected) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEl0002J21f, mRNA sequence
Length = 845
Score = 210 bits (452), Expect = 2e-053
Identities = 74/126 (58%), Positives = 97/126 (76%)
Frame = -2 / +3
Query: 1108 CCEKAHTNRGAWTKEEDERLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDL 929
CC K RG W+ EEDE+L++YI AHG CW ++PK AGL RCGKSCRLRWINYLRPDL
Sbjct: 60 CCSKQKVKRGLWSPEEDEKLLSYITAHGHSCWSAVPKNAGLQRCGKSCRLRWINYLRPDL 239
Query: 928 KRGNFTADEDDLIVKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHVRRKLLGRGIDPVT 749
KRG F+ E+ I+ +H +LGN+W+ IA LPGRTDNE+KN+WN+ +++KL+ +G+DP T
Sbjct: 240 KRGTFSEQEERTILDVHRILGNRWAQIAKHLPGRTDNEVKNFWNSCIKKKLIAQGLDPKT 419
Query: 748 HRPIAA 731
H + A
Sbjct: 420 HNLLPA 437
Score = 104 bits (222), Expect = 9e-022
Identities = 57/120 (47%), Positives = 64/120 (53%)
Frame = +3 / -2
Query: 750 VTGSMPLPSSFRRTCVFQ*FLISLSVRPGSRAAMSDHLFPRRLCSLTMRSSSSAVKLPRF 929
V GS P SF FQ FL SLSVRPG A+ H P+ + M SS + K+PR
Sbjct: 418 VLGSRPCAMSFFLMHEFQKFLTSLSVRPGRCLAICAHRLPKMRWTSRMVRSSCSEKVPRL 239
Query: 930 RSGRR*LIHRSRQLLPHRSRPAALGSDRQHPSPCARM*ATXXXXXXLVHAPLLVCAFSQQ 1109
RSGRR*LIHRSRQLLP R PA LG+ Q PCA M* H+P QQ
Sbjct: 238 RSGRR*LIHRSRQLLPQRCSPAFLGTALQQLWPCAVM*LRSFSSSSGDHSPRFTFCLLQQ 59
>gb|BU998112.1|BU998112 HI10A14r HI Hordeum vulgare subsp. vulgare cDNA clone HI10A14
5-PRIME, mRNA sequence
Length = 580
Score = 208 bits (449), Expect = 4e-053
Identities = 74/120 (61%), Positives = 95/120 (79%)
Frame = -2 / +1
Query: 1120 GRSPCCEKAHTNRGAWTKEEDERLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYL 941
G CC K RG W+ EEDE+LV YI AHG GCW S+P+ AGL RCGKSCRLRWINYL
Sbjct: 64 GHHSCCNKQKVRRGLWSPEEDEKLVKYITAHGHGCWSSVPRQAGLQRCGKSCRLRWINYL 243
Query: 940 RPDLKRGNFTADEDDLIVKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHVRRKLLGRGI 761
RPDLKRG+F+ +E+ LIV+LH +LGN+W+ IA LPGRTDNE+KN+WN+ +++KL+ + +
Sbjct: 244 RPDLKRGSFSQEEEALIVELHRVLGNRWAQIAKHLPGRTDNEVKNFWNSTIKKKLISQAV 423
Score = 113 bits (241), Expect = 2e-024
Identities = 59/111 (53%), Positives = 63/111 (56%)
Frame = +3 / -3
Query: 777 SFRRTCVFQ*FLISLSVRPGSRAAMSDHLFPRRLCSLTMRSSSSAVKLPRFRSGRR*LIH 956
SF FQ F SLSV PG A+ HLFP L S TMR+SSS KLP RSG R*LIH
Sbjct: 407 SFFLMVEFQKFFTSLSVLPGRCLAIWAHLFPSTLWSSTMRASSSCEKLPLLRSGLR*LIH 228
Query: 957 RSRQLLPHRSRPAALGSDRQHPSPCARM*ATXXXXXXLVHAPLLVCAFSQQ 1109
RS QLLPH PA LG++ Q P PCA M T H PLL QQ
Sbjct: 227 RSLQLLPHLCSPACLGTELQQPWPCAVMYLTSFSSSSGDHRPLLTFCLLQQ 75
>gb|BF617439.1|BF617439 HVSMEc0017F20f Hordeum vulgare seedling shoot EST library HVcDNA0003
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEc0017F20f, mRNA sequence
Length = 786
Score = 203 bits (437), Expect(2) = 8e-053
Identities = 75/116 (64%), Positives = 95/116 (81%)
Frame = -2 / +3
Query: 1069 KEEDERLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTADEDDLI 890
+ +L+ +I +G GCW S+PK AGL RCGKSCRLRWINYLRPDLKRG F+ +E+DLI
Sbjct: 168 RRRTRKLMNHIAKYGNGCWSSVPKIAGLERCGKSCRLRWINYLRPDLKRGAFSQEEEDLI 347
Query: 889 VKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHVRRKLLGRGIDPVTHRPIAADAV 722
+ LHS+LGNKWS IAA+LPGRTDNE+KN+WN+ +++KL RGIDP TH+P+A AV
Sbjct: 348 IHLHSILGNKWSQIAAQLPGRTDNEVKNFWNSFIKKKLRQRGIDPATHKPLAPAAV 515
Score = 114 bits (243), Expect = 1e-024
Identities = 60/106 (56%), Positives = 64/106 (60%)
Frame = +3 / -3
Query: 723 TASAAMGRCVTGSMPLPSSFRRTCVFQ*FLISLSVRPGSRAAMSDHLFPRRLCSLTMRSS 902
TA+ A G V GSMP SF FQ FL SLSVRPGS AA+ DHL PR MRSS
Sbjct: 514 TAAGASGLWVAGSMPRWRSFFLMKEFQKFLTSLSVRPGSCAAI*DHLLPRMEWRWMMRSS 335
Query: 903 SSAVKLPRFRSGRR*LIHRSRQLLPHRSRPAALGSDRQHPSPCARM 1040
SS K P RSG R* IH S QL PH SRPA LG++ Q P P M
Sbjct: 334 SSCEKAPLLRSGLR*FIHLSLQLFPHLSRPAILGTELQQPLPYLAM 197
Score = 24.9 bits (48), Expect(2) = 8e-053
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = -2 / +2
Query: 1117 RSPCCEKAHTNRGAWTKEEDER 1052
+ P K RG W+ EEDE+
Sbjct: 119 KRPGGTKKRLKRGLWSPEEDEK 184
>gb|BM370838.2|BM370838 EBro04_SQ002_H14_R root, 3 week, salt-stressed, cv Optic, EBro04
Hordeum vulgare subsp. vulgare cDNA clone
EBro04_SQ002_H14 5', mRNA sequence
Length = 455
Score = 205 bits (442), Expect = 4e-052
Identities = 77/107 (71%), Positives = 89/107 (83%)
Frame = -2 / +2
Query: 1120 GRSPCCEKAHTNRGAWTKEEDERLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYL 941
GR+PCCEK RG WT EED+ LVA+I +HG G WR+LPK AGLLRCGKSCRLRWINYL
Sbjct: 134 GRAPCCEKMGLKRGPWTPEEDKILVAHIHSHGHGNWRALPKQAGLLRCGKSCRLRWINYL 313
Query: 940 RPDLKRGNFTADEDDLIVKLHSLLGNKWSLIAARLPGRTDNEIKNYW 800
RPD+KRGNF+ +E+ I++LH LLGN+WS IAA LPGRTDNEIKN W
Sbjct: 314 RPDIKRGNFSDEEEQSIIQLHQLLGNRWSAIAAMLPGRTDNEIKNVW 454
Score = 124 bits (266), Expect = 7e-028
Identities = 62/105 (59%), Positives = 66/105 (62%)
Frame = +3 / -3
Query: 807 FLISLSVRPGSRAAMSDHLFPRRLCSLTMRSSSSAVKLPRFRSGRR*LIHRSRQLLPHRS 986
FLISLSV PGS AA++DHL P CS + SSS+ KLPR SGRR*LIHRSRQLLPHR
Sbjct: 447 FLISLSVLPGSMAAIADHLLPSSWCSWMIDCSSSSEKLPRLMSGRR*LIHRSRQLLPHRR 268
Query: 987 RPAALGSDRQHPSPCARM*ATXXXXXXLVHAPLLVCAFSQQGDRP 1121
PA LGS RQ P P M AT V PL FSQ G P
Sbjct: 267 SPACLGSARQLPWPWLWMCATRILSSSGVQGPLFRPIFSQHGALP 133
>gb|BI959333.1|BI959333 HVSMEn0019E14f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0019E14f,
mRNA sequence
Length = 635
Score = 202 bits (436), Expect = 3e-051
Identities = 75/118 (63%), Positives = 95/118 (80%)
Frame = -2 / +2
Query: 1084 RGAWTKEEDERLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTAD 905
+G W+ EEDE+L +I HG GCW S+P+ A L RCGKSCRLRWINYLRPDLKRG F+
Sbjct: 125 KGLWSPEEDEKLYNHIIRHGVGCWSSVPRLAALNRCGKSCRLRWINYLRPDLKRGCFSQQ 304
Query: 904 EDDLIVKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHVRRKLLGRGIDPVTHRPIAA 731
E+D IV LH +LGN+WS IA+ LPGRTDNEIKN+WN+ +++KL +GIDP TH+P+A+
Sbjct: 305 EEDHIVALHQILGNRWSQIASHLPGRTDNEIKNFWNSCIKKKLRQQGIDPATHKPMAS 478
Score = 128 bits (275), Expect = 4e-029
Identities = 63/113 (55%), Positives = 71/113 (62%)
Frame = +3 / -3
Query: 702 NETVVTVTASAAMGRCVTGSMPLPSSFRRTCVFQ*FLISLSVRPGSRAAMSDHLFPRRLC 881
N ++ AMG CV GSMP SF +FQ FLISLSVRPG A+ DHL PR
Sbjct: 507 NAAAAVAVSAEAMGLCVAGSMPCCRSFFLMQLFQKFLISLSVRPGRCDAI*DHLLPRIWW 328
Query: 882 SLTMRSSSSAVKLPRFRSGRR*LIHRSRQLLPHRSRPAALGSDRQHPSPCARM 1040
S TM SSS K PR RSGRR*LIHR RQLLP R A+LG++ Q P+PC M
Sbjct: 327 SATMWSSSCWEKQPRLRSGRR*LIHRRRQLLPQRFSAASLGTELQQPTPCRMM 169
>gb|BU996472.1|BU996472 HM13L14r HM Hordeum vulgare subsp. vulgare cDNA clone HM13L14
5-PRIME, mRNA sequence
Length = 648
Score = 202 bits (436), Expect = 3e-051
Identities = 75/118 (63%), Positives = 95/118 (80%)
Frame = -2 / +2
Query: 1084 RGAWTKEEDERLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTAD 905
+G W+ EEDE+L +I HG GCW S+P+ A L RCGKSCRLRWINYLRPDLKRG F+
Sbjct: 134 KGLWSPEEDEKLYNHIIRHGVGCWSSVPRLAALNRCGKSCRLRWINYLRPDLKRGCFSQQ 313
Query: 904 EDDLIVKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHVRRKLLGRGIDPVTHRPIAA 731
E+D IV LH +LGN+WS IA+ LPGRTDNEIKN+WN+ +++KL +GIDP TH+P+A+
Sbjct: 314 EEDHIVALHQILGNRWSQIASHLPGRTDNEIKNFWNSCIKKKLRQQGIDPATHKPMAS 487
Score = 128 bits (275), Expect = 4e-029
Identities = 63/113 (55%), Positives = 71/113 (62%)
Frame = +3 / -1
Query: 702 NETVVTVTASAAMGRCVTGSMPLPSSFRRTCVFQ*FLISLSVRPGSRAAMSDHLFPRRLC 881
N ++ AMG CV GSMP SF +FQ FLISLSVRPG A+ DHL PR
Sbjct: 516 NAAAAVAVSAEAMGLCVAGSMPCCRSFFLMQLFQKFLISLSVRPGRCDAI*DHLLPRIWW 337
Query: 882 SLTMRSSSSAVKLPRFRSGRR*LIHRSRQLLPHRSRPAALGSDRQHPSPCARM 1040
S TM SSS K PR RSGRR*LIHR RQLLP R A+LG++ Q P+PC M
Sbjct: 336 SATMWSSSCWEKQPRLRSGRR*LIHRRRQLLPQRFSAASLGTELQQPTPCRMM 178
>emb|X70878.1|HVMYB3 H.vulgare myb3 mRNA
Length = 1270
Score = 202 bits (436), Expect = 3e-051
Identities = 75/118 (63%), Positives = 95/118 (80%)
Frame = -2 / +2
Query: 1084 RGAWTKEEDERLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTAD 905
+G W+ EEDE+L +I HG GCW S+P+ A L RCGKSCRLRWINYLRPDLKRG F+
Sbjct: 110 KGLWSPEEDEKLYNHIIRHGVGCWSSVPRLAALNRCGKSCRLRWINYLRPDLKRGCFSQQ 289
Query: 904 EDDLIVKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHVRRKLLGRGIDPVTHRPIAA 731
E+D IV LH +LGN+WS IA+ LPGRTDNEIKN+WN+ +++KL +GIDP TH+P+A+
Sbjct: 290 EEDHIVALHQILGNRWSQIASHLPGRTDNEIKNFWNSCIKKKLRQQGIDPATHKPMAS 463
Score = 123 bits (263), Expect = 2e-027
Identities = 61/109 (55%), Positives = 69/109 (63%)
Frame = +3 / -2
Query: 702 NETVVTVTASAAMGRCVTGSMPLPSSFRRTCVFQ*FLISLSVRPGSRAAMSDHLFPRRLC 881
N ++ AMG CV GSMP SF +FQ FLISLSVRPG A+ DHL PR
Sbjct: 492 NAAAAVAVSAEAMGLCVAGSMPCCRSFFLMQLFQKFLISLSVRPGRCDAI*DHLLPRIWW 313
Query: 882 SLTMRSSSSAVKLPRFRSGRR*LIHRSRQLLPHRSRPAALGSDRQHPSP 1028
S TM SSS K PR RSGRR*LIHR RQLLP R A+LG++ Q P+P
Sbjct: 312 SATMWSSSCWEKQPRLRSGRR*LIHRRRQLLPQRFSAASLGTELQQPTP 166
>gb|BQ761004.1|BQ761004 EBro04_SQ001_O04_R root, 3 week, salt-stressed, cv Optic, EBro04
Hordeum vulgare subsp. vulgare cDNA clone
EBro04_SQ001_O04 5', mRNA sequence
Length = 383
Score = 199 bits (430), Expect = 2e-050
Identities = 74/115 (64%), Positives = 92/115 (80%)
Frame = -2 / +2
Query: 1084 RGAWTKEEDERLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTAD 905
+G W+ EEDE+L +I HG GCW S+P+ A L RCGKSCRLRWINYLRPDLKRG F+
Sbjct: 38 KGLWSPEEDEKLYNHIIRHGVGCWSSVPRLAALNRCGKSCRLRWINYLRPDLKRGCFSQQ 217
Query: 904 EDDLIVKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHVRRKLLGRGIDPVTHRP 740
E+D IV LH +LGN+WS IA+ LPGRTDNEIKN+WN+ +++KL +GIDP TH+P
Sbjct: 218 EEDHIVALHQILGNRWSQIASHLPGRTDNEIKNFWNSCIKKKLRQQGIDPATHKP 382
Score = 122 bits (260), Expect = 5e-027
Identities = 60/100 (60%), Positives = 66/100 (66%)
Frame = +3 / -3
Query: 741 GRCVTGSMPLPSSFRRTCVFQ*FLISLSVRPGSRAAMSDHLFPRRLCSLTMRSSSSAVKL 920
G CV GSMP SF +FQ FLISLSVRPG A+ DHL PR S TM SSS K
Sbjct: 381 GLCVAGSMPCCRSFFLMQLFQKFLISLSVRPGRCDAI*DHLLPRIWWSATMWSSSCWEKQ 202
Query: 921 PRFRSGRR*LIHRSRQLLPHRSRPAALGSDRQHPSPCARM 1040
PR RSGRR*LIHR RQLLP R A+LG++ Q P+PC M
Sbjct: 201 PRLRSGRR*LIHRRRQLLPQRFSAASLGTELQQPTPCRMM 82
>gb|CV053597.1|CV053597 BNEL101a5 Barley EST endosperm library Hordeum vulgare subsp. vulgare
cDNA clone BNEL101a5 5' similar to typical P-type R2R3
Myb protein, mRNA sequence
Length = 546
Score = 193 bits (417), Expect = 1e-048
Identities = 71/115 (61%), Positives = 88/115 (76%)
Frame = -2 / +3
Query: 1120 GRSPCCEKAHTNRGAWTKEEDERLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYL 941
GR PCC+K +G WT EED LV+YI+ HG G WR++P GL+RC KSCRLRW NYL
Sbjct: 135 GRPPCCDKVGVKKGPWTPEEDLMLVSYIQEHGPGNWRAVPTNTGLMRCSKSCRLRWTNYL 314
Query: 940 RPDLKRGNFTADEDDLIVKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHVRRKL 776
RP +KRGNF E+ LIV L +LLGN+W+ IA+ LP RTDN+IKNYWNTH+++KL
Sbjct: 315 RPXIKRGNFNDQEEKLIVHLQALLGNRWAAIASYLPERTDNDIKNYWNTHLKKKL 479
Score = 105 bits (224), Expect = 5e-022
Identities = 55/115 (47%), Positives = 64/115 (55%)
Frame = +3 / -3
Query: 777 SFRRTCVFQ*FLISLSVRPGSRAAMSDHLFPRRLCSLTMRSSSSAVKLPRFRSGRR*LIH 956
SF VFQ*FL+SLSV G A++ PR TM SS ++KLPR GRR*L+H
Sbjct: 478 SFFLRWVFQ*FLMSLSVLSGK*DAIAAQRLPRSAWRWTMSFSSWSLKLPRLIXGRR*LVH 299
Query: 957 RSRQLLPHRSRPAALGSDRQHPSPCARM*ATXXXXXXLVHAPLLVCAFSQQGDRP 1121
RSRQLL HR P +G+ RQ P PC+ M* T V P L SQ G P
Sbjct: 298 RSRQLLLHRISPVLVGTARQFPGPCSWM*ETSMRSSSGVQGPFLTPTLSQHGGLP 134
>gb|AV914947.1|AV914947 AV914947 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags9c13 5', mRNA sequence
Length = 506
Score = 190 bits (409), Expect = 1e-047
Identities = 71/103 (68%), Positives = 87/103 (84%)
Frame = -2 / +2
Query: 1084 RGAWTKEEDERLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTAD 905
RG T EED LVA+I HG WR+LP AGLLRCGKSCRLRWINYLRPD+KRGNFT++
Sbjct: 11 RGRGTAEEDMTLVAHIEQHGHSNWRALPNQAGLLRCGKSCRLRWINYLRPDIKRGNFTSE 190
Query: 904 EDDLIVKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHVRRKL 776
E+ I++LH++LGN+WS IAARLPGRTDNEIKN W+TH++++L
Sbjct: 191 EEGAIIQLHAMLGNRWSTIAARLPGRTDNEIKNVWHTHLKKRL 319
Score = 123 bits (263), Expect = 2e-027
Identities = 63/99 (63%), Positives = 63/99 (63%)
Frame = +3 / -3
Query: 792 CVFQ*FLISLSVRPGSRAAMSDHLFPRRLCSLTMRSSSSAVKLPRFRSGRR*LIHRSRQL 971
CV Q FLISLSV PGS AAM DHL P S M SSS VKLPR SGRR*LIHR RQL
Sbjct: 303 CVCQTFLISLSVLPGSLAAMVDHLLPSMAWSWMMAPSSSLVKLPRLMSGRR*LIHRRRQL 124
Query: 972 LPHRSRPAALGSDRQHPSPCARM*ATXXXXXXLVHAPLL 1088
LP RSRPA GS RQ PC M*AT V PLL
Sbjct: 123 LPQRSRPA*FGSARQLLWPCCSM*ATRVMSSSAVPRPLL 7
>gb|CB883071.1|CB883071 HQ01B16w HQ Hordeum vulgare subsp. vulgare cDNA clone HQ01B16
3-PRIME, mRNA sequence
Length = 535
Score = 186 bits (401), Expect = 2e-046
Identities = 71/126 (56%), Positives = 94/126 (74%)
Frame = -2 / +1
Query: 1108 CCEKAHTNRGAWTKEEDERLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDL 929
C + +G WT EED+ LV Y++A+ G WR LPK AGL RCGKSCRLRW NYLRPD+
Sbjct: 118 CESRQGLKKGPWTPEEDKLLVDYVQANAPGNWRMLPKLAGLNRCGKSCRLRWTNYLRPDI 297
Query: 928 KRGNFTADEDDLIVKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHVRRKLLGRGIDPVT 749
KRG FT +E I++LH+++GNKWS+IAA+LPGRTDNEIKNYWNT+++++L +
Sbjct: 298 KRGPFTPEEHKSILQLHAIVGNKWSMIAAQLPGRTDNEIKNYWNTNLKKQLRQAALVGEQ 477
Query: 748 HRPIAA 731
H +A+
Sbjct: 478 HPAVAS 495
Score = 116 bits (249), Expect = 2e-025
Identities = 58/96 (60%), Positives = 62/96 (64%)
Frame = +3 / -3
Query: 795 VFQ*FLISLSVRPGSRAAMSDHLFPRRLCSLTMRSSSSAVKLPRFRSGRR*LIHRSRQLL 974
VFQ*FLISLSVRPGS AA+ DHL P S M SS VK PR SGRR* +HRSRQLL
Sbjct: 431 VFQ*FLISLSVRPGSCAAIMDHLLPTMAWSWRMDLCSSGVKGPRLMSGRR*FVHRSRQLL 252
Query: 975 PHRSRPAALGSDRQHPSPCARM*ATXXXXXXLVHAP 1082
PHR PA+LGS RQ P A *+T VH P
Sbjct: 251 PHRFSPASLGSMRQLPGALAWT*STRSLSSSGVHGP 144
>gb|AY672068.1| Hordeum vulgare subsp. vulgare myb transcription factor mRNA,
complete cds
Length = 1542
Score = 186 bits (401), Expect = 2e-046
Identities = 70/107 (65%), Positives = 87/107 (81%)
Frame = -2 / +2
Query: 1096 AHTNRGAWTKEEDERLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGN 917
A +G W+ EEDERLVAY+ G+G W + + AGL RCGKSCRLRWINYLRPDLKRG
Sbjct: 173 AKLRKGLWSPEEDERLVAYMLRSGQGSWSDVARNAGLQRCGKSCRLRWINYLRPDLKRGA 352
Query: 916 FTADEDDLIVKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHVRRKL 776
F+ E+DLIV LH++LGN+WS IAARLPGRTDNEIKN+WN+ ++++L
Sbjct: 353 FSPHEEDLIVNLHAILGNRWSQIAARLPGRTDNEIKNFWNSTIKKRL 493
Score = 113 bits (242), Expect = 1e-024
Identities = 55/95 (57%), Positives = 59/95 (62%)
Frame = +3 / -1
Query: 798 FQ*FLISLSVRPGSRAAMSDHLFPRRLCSLTMRSSSSAVKLPRFRSGRR*LIHRSRQLLP 977
FQ FLISLSVRPG+ AA+ DHL PR LTMRSSS K PR RSGRR*LIHR RQLLP
Sbjct: 471 FQKFLISLSVRPGNLAAI*DHLLPRMAWRLTMRSSSCGEKAPRLRSGRR*LIHRRRQLLP 292
Query: 978 HRSRPAALGSDRQHPSPCARM*ATXXXXXXLVHAP 1082
HR PA + P P M AT H+P
Sbjct: 291 HRCNPALRATSLHDP*PLRSMYATSLSSSSGDHSP 187
>gb|BI957410.1|BI957410 HVSMEn0009G13f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0009G13f,
mRNA sequence
Length = 673
Score = 186 bits (400), Expect = 2e-046
Identities = 70/99 (70%), Positives = 86/99 (86%)
Frame = -2 / +2
Query: 1072 TKEEDERLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTADEDDL 893
T EED+ LVA+I +HG G WR+LPK AGLLRCGKSCRLRWINYLRPD+KRGNF+ +E+
Sbjct: 2 TPEEDKILVAHIHSHGHGNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFSDEEEQS 181
Query: 892 IVKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHVRRKL 776
I++LH LLGN+WS IAARLPGRTDN IKN W+TH++++L
Sbjct: 182 IIQLHQLLGNRWSAIAARLPGRTDN*IKNVWHTHLKKRL 298
Score = 109 bits (232), Expect = 4e-023
Identities = 53/81 (65%), Positives = 57/81 (70%)
Frame = +3 / -2
Query: 807 FLISLSVRPGSRAAMSDHLFPRRLCSLTMRSSSSAVKLPRFRSGRR*LIHRSRQLLPHRS 986
FLI LSV PGS AA++DHL P CS + SSS+ KLPR SGRR*LIHRSRQLLPHR
Sbjct: 267 FLI*LSVLPGSLAAIADHLLPSSWCSWMIDCSSSSEKLPRLMSGRR*LIHRSRQLLPHRR 88
Query: 987 RPAALGSDRQHPSPCARM*AT 1049
PA LGS RQ P P M AT
Sbjct: 87 SPACLGSARQLPWPWLWMCAT 25
>gb|CB882601.1|CB882601 HL02F10w HL Hordeum vulgare subsp. vulgare cDNA clone HL02F10
3-PRIME, mRNA sequence
Length = 610
Score = 184 bits (396), Expect = 9e-046
Identities = 71/132 (53%), Positives = 94/132 (71%)
Frame = -2 / +1
Query: 1084 RGAWTKEEDERLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTAD 905
+G W+ EED++L YI HG GCW +LP AGL R GKSCRLRWINYLRP LK G F+A+
Sbjct: 154 KGLWSPEEDQKLRDYILRHGHGCWSALPAKAGLQRNGKSCRLRWINYLRPGLKHGMFSAE 333
Query: 904 EDDLIVKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHVRRKLLGRGIDPVTHRPIAADA 725
E++ ++ LH+ LGNKWS IA LPGRTDNE+KNYWN+++++++ G P + P AA +
Sbjct: 334 EEETVMSLHAALGNKWSRIARHLPGRTDNEVKNYWNSYLKKRVEGGKGAPNSPAPAAASS 513
Query: 724 VTVTTVSFQPSP 689
+ S PSP
Sbjct: 514 AADSDGSQSPSP 549
Score = 103 bits (220), Expect = 2e-021
Identities = 58/117 (49%), Positives = 64/117 (54%)
Frame = +3 / -3
Query: 732 AAMGRCVTGSMPLPSSFRRTCVFQ*FLISLSVRPGSRAAMSDHLFPRRLCSLTMRSSSSA 911
AA G G+ PS+ FQ*FL SLSV PG A+ DHL PR L SSSSA
Sbjct: 506 AAAGAGELGAPLPPSTLFLR*EFQ*FLTSLSVLPGKCRAILDHLLPRAAWRLITVSSSSA 327
Query: 912 VKLPRFRSGRR*LIHRSRQLLPHRSRPAALGSDRQHPSPCARM*ATXXXXXXLVHAP 1082
+P F GRR*LIHRS QLLP R PA GS Q P PC RM*+ H+P
Sbjct: 326 ENMPCFSPGRR*LIHRSLQLLPFRWSPALAGSALQQPWPCRRM*SRSFWSSSGDHSP 156
>emb|X99973.1|HVMYB4TRF H.vulgare mRNA for myb4 transcription factor
Length = 1180
Score = 182 bits (391), Expect = 4e-045
Identities = 67/92 (72%), Positives = 82/92 (89%)
Frame = -2 / +3
Query: 1051 LVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTADEDDLIVKLHSL 872
LVA+I +HG G WR+LPK AGLLRCGKSCRLRWINYLRPD+KRGNF+ +E+ I++LH L
Sbjct: 69 LVAHIHSHGHGNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFSDEEEQSIIQLHQL 248
Query: 871 LGNKWSLIAARLPGRTDNEIKNYWNTHVRRKL 776
LGN+WS IAARLPGRTDNEIKN W+TH++++L
Sbjct: 249 LGNRWSAIAARLPGRTDNEIKNVWHTHLKKRL 344
Score = 112 bits (240), Expect = 3e-024
Identities = 54/81 (66%), Positives = 58/81 (71%)
Frame = +3 / -1
Query: 807 FLISLSVRPGSRAAMSDHLFPRRLCSLTMRSSSSAVKLPRFRSGRR*LIHRSRQLLPHRS 986
FLISLSV PGS AA++DHL P CS + SSS+ KLPR SGRR*LIHRSRQLLPHR
Sbjct: 313 FLISLSVLPGSLAAIADHLLPSSWCSWMIDCSSSSEKLPRLMSGRR*LIHRSRQLLPHRR 134
Query: 987 RPAALGSDRQHPSPCARM*AT 1049
PA LGS RQ P P M AT
Sbjct: 133 SPACLGSARQLPWPWLWMCAT 71
>emb|X70881.1|HVMYB3G H.vulgare myb3 gene
Length = 3241
Score = 128 bits (274), Expect(2) = 5e-045
Identities = 48/76 (63%), Positives = 59/76 (77%)
Frame = -2 / +3
Query: 1084 RGAWTKEEDERLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTAD 905
+G W+ EEDE+L +I HG GCW S+P+ A L RCGKSCRLRWINYLRPDLKRG F+
Sbjct: 1110 KGLWSPEEDEKLYNHIIRHGVGCWSSVPRLAALNRCGKSCRLRWINYLRPDLKRGCFSQQ 1289
Query: 904 EDDLIVKLHSLLGNKW 857
E+D IV LH +LGN++
Sbjct: 1290 EEDHIVALHQILGNRF 1337
Score = 78.5 bits (165), Expect(2) = 5e-045
Identities = 27/44 (61%), Positives = 38/44 (86%)
Frame = -2 / +1
Query: 862 KWSLIAARLPGRTDNEIKNYWNTHVRRKLLGRGIDPVTHRPIAA 731
+WS IA+ LPGRTDNEIKN+WN+ +++KL +GIDP TH+P+A+
Sbjct: 1486 RWSQIASHLPGRTDNEIKNFWNSCIKKKLRQQGIDPATHKPMAS 1617
>gb|CB877704.1|CB877704 HP05O05T HP Hordeum vulgare subsp. vulgare cDNA clone HP05O05
5-PRIME, mRNA sequence
Length = 520
Score = 180 bits (388), Expect = 1e-044
Identities = 71/107 (66%), Positives = 82/107 (76%)
Frame = -2 / +1
Query: 1102 EKAHTNRGAWTKEEDERLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKR 923
E+A RG WT +ED L+ YI HGEG W +L +AAGL R GKSCRLRW+NYLRPD+KR
Sbjct: 127 EEAELRRGPWTVDEDLTLINYISDHGEGRWNALARAAGLRRTGKSCRLRWLNYLRPDVKR 306
Query: 922 GNFTADEDDLIVKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHVRR 782
GNFTADE LI+ LHS GN+WS IA LPGRTDNEIKNYW T V++
Sbjct: 307 GNFTADEQLLILDLHSRWGNRWSKIAQHLPGRTDNEIKNYWRTRVQK 447
Score = 115 bits (246), Expect = 4e-025
Identities = 58/98 (59%), Positives = 61/98 (62%)
Frame = +3 / -3
Query: 789 TCVFQ*FLISLSVRPGSRAAMSDHLFPRRLCSLTMRSSSSAVKLPRFRSGRR*LIHRSRQ 968
T V Q*FLISLSVRPG A+ DH P+R MRS SSAVKLPRF SGRR* HRSRQ
Sbjct: 440 TLVLQ*FLISLSVRPGRCCAIFDHRLPQREWRSRMRSCSSAVKLPRFTSGRR*FSHRSRQ 261
Query: 969 LLPHRSRPAALGSDRQHPSPCARM*ATXXXXXXLVHAP 1082
L P R RPAA S Q PSP + M* VH P
Sbjct: 260 LFPVRLRPAARASAFQRPSP*SEM*LISVRSSSTVHGP 147
>gb|BG369720.1|BG369720 HVSMEi0025K10f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0025K10f, mRNA sequence
Length = 718
Score = 179 bits (385), Expect = 3e-044
Identities = 71/105 (67%), Positives = 80/105 (76%)
Frame = -2 / +3
Query: 1102 EKAHTNRGAWTKEEDERLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKR 923
E+A RG WT +ED L+ YI HGEG W +L +AAGL R GKSCRLRW+NYLRPD+KR
Sbjct: 120 EEAELRRGPWTVDEDLTLINYISDHGEGRWNALARAAGLRRTGKSCRLRWLNYLRPDVKR 299
Query: 922 GNFTADEDDLIVKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHV 788
GNFTADE LI+ LHS GN+WS IA LPGRTDNEIKNYW T V
Sbjct: 300 GNFTADEQLLILDLHSRWGNRWSKIAQHLPGRTDNEIKNYWRTRV 434
Score = 115 bits (246), Expect = 4e-025
Identities = 58/98 (59%), Positives = 61/98 (62%)
Frame = +3 / -1
Query: 789 TCVFQ*FLISLSVRPGSRAAMSDHLFPRRLCSLTMRSSSSAVKLPRFRSGRR*LIHRSRQ 968
T V Q*FLISLSVRPG A+ DH P+R MRS SSAVKLPRF SGRR* HRSRQ
Sbjct: 433 TLVLQ*FLISLSVRPGRCCAIFDHRLPQREWRSRMRSCSSAVKLPRFTSGRR*FSHRSRQ 254
Query: 969 LLPHRSRPAALGSDRQHPSPCARM*ATXXXXXXLVHAP 1082
L P R RPAA S Q PSP + M* VH P
Sbjct: 253 LFPVRLRPAARASAFQRPSP*SEM*LISVRSSSTVHGP 140
>gb|BQ467188.1|BQ467188 HS02O24r HS Hordeum vulgare subsp. vulgare cDNA clone HS02O24
5-PRIME, mRNA sequence
Length = 363
Score = 179 bits (385), Expect = 3e-044
Identities = 67/107 (62%), Positives = 83/107 (77%)
Frame = -2 / +2
Query: 1084 RGAWTKEEDERLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTAD 905
+G WT EED LV+Y++ HG G WR++P GL+RC KSCRLRW NYLRP +KRGNFT
Sbjct: 17 KGPWTPEEDLVLVSYVQEHGPGNWRAVPTRTGLMRCSKSCRLRWTNYLRPGIKRGNFTDQ 196
Query: 904 EDDLIVKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHVRRKLLGRG 764
E+ LIV L +LLGN+W+ IA+ LP RTDN+IKNYWNTH++RKL G
Sbjct: 197 EEKLIVHLQALLGNRWAAIASYLPERTDNDIKNYWNTHLKRKLQAGG 337
Score = 113 bits (241), Expect = 2e-024
Identities = 56/108 (51%), Positives = 64/108 (59%)
Frame = +3 / -1
Query: 765 PLPSSFRRTCVFQ*FLISLSVRPGSRAAMSDHLFPRRLCSLTMRSSSSAVKLPRFRSGRR 944
P S R CVFQ*FL+SLSVR G A++ HL P TM SS +VKLPR GRR
Sbjct: 336 PPACSLRLRCVFQ*FLMSLSVRSGR*EAIAAHLLPSSAWRWTMSFSSWSVKLPRLIPGRR 157
Query: 945 *LIHRSRQLLPHRSRPAALGSDRQHPSPCARM*ATXXXXXXLVHAPLL 1088
*L+HRSRQLL HR RP +G+ RQ P PC+ * T V P L
Sbjct: 156 *LVHRSRQLLLHRIRPVRVGTARQFPGPCSWT*ETSTRSSSGVQGPFL 13
>gb|CB876695.1|CB876695 HP02B11T HP Hordeum vulgare subsp. vulgare cDNA clone HP02B11
5-PRIME, mRNA sequence
Length = 637
Score = 179 bits (385), Expect = 3e-044
Identities = 66/107 (61%), Positives = 84/107 (78%)
Frame = -2 / +3
Query: 1096 AHTNRGAWTKEEDERLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGN 917
A +G WT EED LV+YI+ HG G WRS+P+ GL+RC KSCRLRW NYLRP +KRGN
Sbjct: 162 ASVKKGPWTPEEDIILVSYIQQHGPGNWRSVPENTGLMRCSKSCRLRWTNYLRPGIKRGN 341
Query: 916 FTADEDDLIVKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHVRRKL 776
FT E+ +I+ L +LLGNKW+ IA+ LP RTDN+IKNYWNTH+++K+
Sbjct: 342 FTQHEEGIIIHLQALLGNKWAAIASYLPQRTDNDIKNYWNTHLKKKV 482
>gb|BQ463523.1|BQ463523 HI05J08r HI Hordeum vulgare subsp. vulgare cDNA clone HI05J08
5-PRIME, mRNA sequence
Length = 436
Score = 178 bits (384), Expect = 4e-044
Identities = 66/97 (68%), Positives = 80/97 (82%)
Frame = -2 / +2
Query: 1084 RGAWTKEEDERLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTAD 905
+G W+ EEDE+L +I +G GCW S+PK AGL RCGKSCRLRWINYLRPDLKRG+F+
Sbjct: 146 KGLWSPEEDEKLYNHIIRYGVGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGSFSQQ 325
Query: 904 EDDLIVKLHSLLGNKWSLIAARLPGRTDNEIKNYWNT 794
E+D IV LH +LGN+WS IA+ LPGRTDNEIKN+WN+
Sbjct: 326 EEDAIVGLHEILGNRWSQIASHLPGRTDNEIKNFWNS 436
Score = 127 bits (272), Expect = 1e-028
Identities = 56/78 (71%), Positives = 62/78 (79%)
Frame = +3 / -2
Query: 795 VFQ*FLISLSVRPGSRAAMSDHLFPRRLCSLTMRSSSSAVKLPRFRSGRR*LIHRSRQLL 974
+FQ FLISLSVRPG A+ DHLFPR C TM SSS KLPRFRSGRR*LIHRSRQLL
Sbjct: 435 LFQKFLISLSVRPGK*DAICDHLFPRISCRPTMASSSCCEKLPRFRSGRR*LIHRSRQLL 256
Query: 975 PHRSRPAALGSDRQHPSP 1028
PH RPA+LG++ QHP+P
Sbjct: 255 PHLCRPASLGTELQHPTP 202
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 377,716,862
Number of Sequences: 312970
Number of extensions: 5421858
Number of successful extensions: 48907
Number of sequences better than 1.0e-020: 140
length of database: 58,378,179
effective HSP length: 53
effective length of database: 41,790,769
effective search space used: 13373046080
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)