TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2907809.2.1
(614 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BQ763124.1|BQ763124 EBro02_SQ007_E09_R root, 3 week, hyd... 184 8e-049
gb|AL511285.1|AL511285 AL511285 Hordeum vulgare Barke devel... 184 9e-049
gb|BG417020.2|BG417020 HVSMEk0015L16f Hordeum vulgare testa... 184 1e-048
gb|BQ458766.1|BQ458766 HA04E18r HA Hordeum vulgare subsp. v... 184 1e-048
gb|BQ766807.1|BQ766807 EBro08_SQ007_M04_R root, 3 week, dro... 184 1e-048
gb|BU986583.1|BU986583 HF12E22r HF Hordeum vulgare subsp. v... 184 1e-048
gb|CA029563.1|CA029563 HZ65J06r HZ Hordeum vulgare subsp. v... 184 1e-048
gb|BQ759939.1|BQ759939 EBpi05_SQ004_M20_R pistil, 8 DPA, no... 184 1e-048
gb|AV924567.1|AV924567 AV924567 K. Sato unpublished cDNA li... 184 1e-048
gb|BQ764563.1|BQ764563 EBca01_SQ004_B09_R carpel, pre-anthe... 184 1e-048
gb|BQ764891.1|BQ764891 EBca01_SQ005_N05_R carpel, pre-anthe... 184 1e-048
gb|BU986770.1|BU986770 HF12N15r HF Hordeum vulgare subsp. v... 184 1e-048
gb|BU994476.1|BU994476 HM07D06r HM Hordeum vulgare subsp. v... 184 1e-048
gb|CB880006.1|CB880006 HM05D06w HM Hordeum vulgare subsp. v... 184 1e-048
gb|BM098106.2|BM098106 EBpi03_SQ002_J03_R pistil, 4 DPA, no... 184 1e-048
gb|BQ764164.1|BQ764164 EBan01_SQ005_E04 _R anther, yellow s... 184 1e-048
gb|BU977132.1|BU977132 HA10O07r HA Hordeum vulgare subsp. v... 184 1e-048
gb|CV053657.1|CV053657 BNEL101g1 Barley EST endosperm libra... 184 1e-048
gb|BQ766378.1|BQ766378 EBro08_SQ005_G20_R root, 3 week, dro... 184 1e-048
gb|BU977133.1|BU977133 HA10O07u HA Hordeum vulgare subsp. v... 184 1e-048
gb|CA026043.1|CA026043 HZ53O20r HZ Hordeum vulgare subsp. v... 184 1e-048
gb|BM373095.2|BM373095 EBma04_SQ003_B07_R maternal, 10 DPA,... 184 1e-048
gb|BM373452.2|BM373452 EBma04_SQ004_H21_R maternal, 10 DPA,... 184 1e-048
gb|BM371901.2|BM371901 EBma08_SQ004_G03_R maternal, 28 DPA,... 184 1e-048
gb|BU978911.1|BU978911 HA14J22r HA Hordeum vulgare subsp. v... 184 1e-048
gb|AL505427.1|AL505427 AL505427 Hordeum vulgare Barke roots... 184 1e-048
gb|BQ764507.1|BQ764507 EBca01_SQ004_G03_R carpel, pre-anthe... 184 1e-048
gb|BQ766679.1|BQ766679 EBro08_SQ006_G20_R root, 3 week, dro... 184 1e-048
gb|CV060323.1|CV060323 BNEL56h2 Barley EST endosperm librar... 184 1e-048
gb|CV058072.1|CV058072 BNEL34a5 Barley EST endosperm librar... 184 1e-048
gb|CV060618.1|CV060618 BNEL5C10 Barley EST endosperm librar... 184 1e-048
gb|CV063834.1|CV063834 BNEL93f9 Barley EST endosperm librar... 184 1e-048
gb|BE454194.3|BE454194 HVSMEh0093D11f Hordeum vulgare 5-45 ... 184 1e-048
gb|AV924568.1|AV924568 AV924568 K. Sato unpublished cDNA li... 184 1e-048
gb|CA008240.1|CA008240 HU10F12r HU Hordeum vulgare subsp. v... 184 1e-048
gb|CA024364.1|CA024364 HZ49B16r HZ Hordeum vulgare subsp. v... 184 2e-048
gb|BU982803.1|BU982803 HA27K14r HA Hordeum vulgare subsp. v... 184 2e-048
gb|CB878510.1|CB878510 HP08M18T HP Hordeum vulgare subsp. v... 183 2e-048
gb|BM816164.1|BM816164 HC107E09_SK.ab1 HC Hordeum vulgare s... 184 4e-048
gb|BI776312.2|BI776312 EBem04_SQ001_I10_R embryo, 12 DPA, n... 182 4e-048
gb|BI948827.1|BI948827 HVSMEl0010P05f Hordeum vulgare spike... 182 4e-048
gb|BQ463755.1|BQ463755 HG01F11r HG Hordeum vulgare subsp. v... 184 7e-048
gb|AL508029.1|AL508029 AL508029 Hordeum vulgare Barke devel... 180 1e-047
gb|BU982085.1|BU982085 HA25H17r HA Hordeum vulgare subsp. v... 184 3e-047
gb|CK123633.1|CK123633 BES1824104m10 BES1824 Hordeum vulgar... 184 3e-047
gb|BM099768.2|BM099768 EBes01_SQ004_D14_R embryo sac, 4-6 D... 184 3e-047
gb|BU987968.1|BU987968 HF16E18r HF Hordeum vulgare subsp. v... 184 3e-047
gb|BG343463.2|BG343463 HVSMEg0005N08f Hordeum vulgare pre-a... 184 3e-047
gb|BJ544135.1|BJ544135 BJ544135 K. Sato unpublished cDNA li... 184 3e-047
gb|CK124001.1|CK124001 BES1824106h10 BES1824 Hordeum vulgar... 184 3e-047
gb|CB877573.1|CB877573 HP05G20T HP Hordeum vulgare subsp. v... 184 3e-047
gb|CK125851.1|CK125851 BES1824111A1d05 BES1824 Hordeum vulg... 184 3e-047
gb|AL503351.1|AL503351 AL503351 Hordeum vulgare Barke roots... 184 3e-047
gb|BU998080.1|BU998080 HI09P01r HI Hordeum vulgare subsp. v... 184 3e-047
gb|AV923307.1|AV923307 AV923307 K. Sato unpublished cDNA li... 184 3e-047
gb|AL503813.1|AL503813 AL503813 Hordeum vulgare Barke roots... 181 6e-047
gb|BU996438.1|BU996438 HM13J16r HM Hordeum vulgare subsp. v... 177 9e-047
gb|BE214876.3|BE214876 HV_CEb0004P14f Hordeum vulgare seedl... 184 1e-046
gb|AV929683.1|AV929683 AV929683 K. Sato unpublished cDNA li... 184 1e-046
gb|CV061081.1|CV061081 BNEL64g12 Barley EST endosperm libra... 184 1e-046
gb|BQ459973.1|BQ459973 HA07J01r HA Hordeum vulgare subsp. v... 184 1e-046
gb|AL507408.1|AL507408 AL507408 Hordeum vulgare Barke devel... 184 1e-046
gb|AL510613.1|AL510613 AL510613 Hordeum vulgare Barke devel... 184 1e-046
gb|BQ460828.1|BQ460828 HA05M18r HA Hordeum vulgare subsp. v... 184 1e-046
gb|BM099747.2|BM099747 EBes01_SQ004_C16_R embryo sac, 4-6 D... 184 1e-046
gb|BM098229.2|BM098229 EBpi03_SQ002_O15_R pistil, 4 DPA, no... 184 1e-046
gb|BI780938.2|BI780938 EBma05_SQ001_J06_R maternal, 12 DPA,... 184 1e-046
gb|AL450589.1|AL450589 AL450589 Hordeum vulgare Barke etiol... 184 1e-046
gb|AL503714.1|AL503714 AL503714 Hordeum vulgare Barke roots... 184 1e-046
gb|AV927475.1|AV927475 AV927475 K. Sato unpublished cDNA li... 184 1e-046
gb|BU976292.1|BU976292 HA03H13r HA Hordeum vulgare subsp. v... 184 1e-046
gb|BJ545651.1|BJ545651 BJ545651 K. Sato unpublished cDNA li... 184 1e-046
gb|BQ764498.1|BQ764498 EBca01_SQ004_E05_R carpel, pre-anthe... 184 1e-046
gb|AV928485.1|AV928485 AV928485 K. Sato unpublished cDNA li... 184 1e-046
gb|CV061370.1|CV061370 BNEL68a6 Barley EST endosperm librar... 184 1e-046
gb|BM816258.1|BM816258 HB106E10_SK.ab1 HB Hordeum vulgare s... 184 2e-046
gb|BM816165.1|BM816165 HC112F06_T3.ab1 HC Hordeum vulgare s... 178 2e-046
gb|BF625390.2|BF625390 HVSMEa0008M17f Hordeum vulgare seedl... 184 2e-046
gb|BM816259.1|BM816259 HC110D12_T3.ab1 HC Hordeum vulgare s... 184 3e-046
gb|CD662944.1|CD662944 UCRHV18_03ch08_b1 Drought-stressed D... 184 3e-046
gb|BQ467331.1|BQ467331 HS03G21r HS Hordeum vulgare subsp. v... 180 3e-046
gb|BQ464468.1|BQ464468 HF02F23r HF Hordeum vulgare subsp. v... 180 4e-046
gb|BF267079.2|BF267079 HV_CEa0016O05f Hordeum vulgare seedl... 184 4e-046
gb|BF261440.3|BF261440 HV_CEa0001E16f Hordeum vulgare seedl... 184 4e-046
gb|AV911940.1|AV911940 AV911940 K. Sato unpublished cDNA li... 184 4e-046
gb|AV921734.1|AV921734 AV921734 K. Sato unpublished cDNA li... 184 4e-046
gb|AV921751.1|AV921751 AV921751 K. Sato unpublished cDNA li... 184 4e-046
gb|AV929664.1|AV929664 AV929664 K. Sato unpublished cDNA li... 184 4e-046
gb|AV929665.1|AV929665 AV929665 K. Sato unpublished cDNA li... 184 4e-046
gb|AV929690.1|AV929690 AV929690 K. Sato unpublished cDNA li... 184 4e-046
gb|AJ462504.1|AJ462504 AJ462504 S00002 Hordeum vulgare subs... 184 4e-046
gb|AJ462505.1|AJ462505 AJ462505 S00002 Hordeum vulgare subs... 184 4e-046
gb|AJ462506.1|AJ462506 AJ462506 S00002 Hordeum vulgare subs... 184 4e-046
gb|BQ469224.1|BQ469224 HM03M08r HM Hordeum vulgare subsp. v... 184 4e-046
gb|BQ469662.1|BQ469662 HZ01H20r HZ Hordeum vulgare subsp. v... 184 4e-046
gb|BQ661491.1|BQ661491 HM03M08u HM Hordeum vulgare subsp. v... 184 4e-046
gb|BM375459.2|BM375459 EBem06_SQ003_G17_R embryo, 21 DPA, n... 184 4e-046
gb|BI780668.2|BI780668 EBes01_SQ001_L08_R embryo sac, 4-6 D... 184 4e-046
gb|BI781188.2|BI781188 EBma03_SQ001_L10_R maternal, 8 DPA, ... 184 4e-046
gb|BM096848.2|BM096848 EBma07_SQ001_O04_R maternal, 21 DPA,... 184 4e-046
gb|BM096785.2|BM096785 EBma07_SQ001_K07_R maternal, 21 DPA,... 184 4e-046
gb|BM097918.2|BM097918 EBpi03_SQ002_A18_R pistil, 4 DPA, no... 184 4e-046
gb|BQ755351.1|BQ755351 EBed07_SQ002_J12_R endosperm, 28 DPA... 184 4e-046
gb|BQ758239.1|BQ758239 EBma03_SQ001_G18_R maternal, 8 DPA, ... 184 4e-046
gb|BU972492.1|BU972492 HB21M18r BC Hordeum vulgare subsp. v... 184 4e-046
gb|BU974564.1|BU974564 HB28F14r BC Hordeum vulgare subsp. v... 184 4e-046
gb|BU987816.1|BU987816 HF15N13r HF Hordeum vulgare subsp. v... 184 4e-046
gb|BU989045.1|BU989045 HF19J13r HF Hordeum vulgare subsp. v... 184 4e-046
gb|CA003819.1|CA003819 HS15K18r HS Hordeum vulgare subsp. v... 184 4e-046
gb|CA020872.1|CA020872 HZ38C19r HZ Hordeum vulgare subsp. v... 184 4e-046
gb|CA022553.1|CA022553 HZ43J19r HZ Hordeum vulgare subsp. v... 184 4e-046
gb|CA027207.1|CA027207 HZ58D07r HZ Hordeum vulgare subsp. v... 184 4e-046
gb|CA027272.1|CA027272 HZ58G10r HZ Hordeum vulgare subsp. v... 184 4e-046
gb|CA029023.1|CA029023 HZ63P13r HZ Hordeum vulgare subsp. v... 184 4e-046
gb|CA029067.1|CA029067 HZ64B19r HZ Hordeum vulgare subsp. v... 184 4e-046
gb|BM817391.1|BM817391 HC111G03_T3.ab1 HC Hordeum vulgare s... 183 5e-046
gb|BI947685.1|BI947685 HVSMEl0006H01f Hordeum vulgare spike... 182 1e-045
gb|BM376968.2|BM376968 EBem05_SQ003_L22_R embryo, 14 DPA, n... 173 1e-045
gb|AV908970.1|AV908970 AV908970 K. Sato unpublished cDNA li... 182 1e-045
gb|BM444123.1|BM444123 EBem09_SQ004_D16_R embryo, 1 Day ger... 182 1e-045
gb|BM443018.2|BM443018 EBro02_SQ002_D08_R root, 3 week, hyd... 180 1e-045
gb|BU998876.1|BU998876 HI12G20r HI Hordeum vulgare subsp. v... 177 2e-045
gb|BQ459398.1|BQ459398 HA01D21r HA Hordeum vulgare subsp. v... 181 4e-045
gb|AV922757.1|AV922757 AV922757 K. Sato unpublished cDNA li... 176 6e-045
gb|BQ757904.1|BQ757904 EBem10_SQ005_K05_R embryo, 2 Day ger... 180 7e-045
gb|BF628778.2|BF628778 HVSMEb0008B20f Hordeum vulgare seedl... 179 1e-044
gb|BI779089.2|BI779089 EBro01_SQ002_O18_R root, 3 week, hyd... 179 1e-044
gb|CD662294.1|CD662294 UCRHV18_01bf10_b1 Drought-stressed D... 177 5e-044
gb|BQ761976.1|BQ761976 EBpi01_SQ005_N11_R pistil, 1 DPA, no... 168 6e-044
gb|BU974544.1|BU974544 HB28E04r BC Hordeum vulgare subsp. v... 176 9e-044
gb|AL501232.1|AL501232 AL501232 Hordeum vulgare Barke roots... 157 4e-042
gb|AL502695.1|AL502695 AL502695 Hordeum vulgare Barke roots... 157 5e-042
gb|BG301139.2|BG301139 HVSMEb0019L02f Hordeum vulgare seedl... 170 8e-042
gb|BQ762525.1|BQ762525 EBro02_SQ004_L01 _R root, 3 week, hy... 166 1e-040
gb|AL501139.1|AL501139 AL501139 Hordeum vulgare Barke roots... 157 4e-040
gb|AV916320.1|AV916320 AV916320 K. Sato unpublished cDNA li... 155 5e-040
gb|BQ765811.1|BQ765811 EBro03_SQ008_A12_R root, 3 week, wat... 159 9e-040
gb|BI948894.1|BI948894 HVSMEl0011E22f Hordeum vulgare spike... 105 1e-039
gb|BI952439.1|BI952439 HVSMEm0006H01f Hordeum vulgare green... 162 1e-039
gb|AV924587.1|AV924587 AV924587 K. Sato unpublished cDNA li... 155 1e-039
gb|AV924595.1|AV924595 AV924595 K. Sato unpublished cDNA li... 155 1e-039
gb|BM444450.1|BM444450 EBem09_SQ005_E10_R embryo, 1 Day ger... 121 1e-039
gb|BM375354.2|BM375354 EBem06_SQ003_B16_R embryo, 21 DPA, n... 152 2e-039
gb|AL500756.1|AL500756 AL500756 Hordeum vulgare Barke roots... 157 4e-039
gb|AV909837.1|AV909837 AV909837 K. Sato unpublished cDNA li... 155 6e-039
gb|BI957910.1|BI957910 HVSMEn0012B15f Hordeum vulgare rachi... 153 7e-037
gb|BQ757901.1|BQ757901 EBem10_SQ005_J24_R embryo, 2 Day ger... 152 1e-036
gb|BJ544945.1|BJ544945 BJ544945 K. Sato unpublished cDNA li... 139 1e-035
gb|AJ462508.1|AJ462508 AJ462508 S00002 Hordeum vulgare subs... 148 2e-035
gb|BI951031.1|BI951031 HVSMEl0024B12f Hordeum vulgare spike... 137 6e-035
gb|BJ546429.1|BJ546429 BJ546429 K. Sato unpublished cDNA li... 144 1e-034
gb|BM441381.2|BM441381 EBma05_SQ004_A24_R maternal, 12 DPA,... 141 2e-034
gb|CA026763.1|CA026763 HZ56O06r HZ Hordeum vulgare subsp. v... 133 8e-034
gb|AJ462507.1|AJ462507 AJ462507 S00002 Hordeum vulgare subs... 138 2e-032
gb|BI777044.2|BI777044 EBpi03_SQ001_L20_R pistil, 4 DPA, no... 133 2e-032
gb|BJ546317.1|BJ546317 BJ546317 K. Sato unpublished cDNA li... 133 7e-032
gb|BU982951.1|BU982951 HA28B12r HA Hordeum vulgare subsp. v... 136 9e-032
gb|BM445268.2|BM445268 EBem09_SQ007_O14_R embryo, 1 Day ger... 134 3e-031
gb|BU989732.1|BU989732 HF22I20r HF Hordeum vulgare subsp. v... 125 4e-030
gb|AV916304.1|AV916304 AV916304 K. Sato unpublished cDNA li... 113 6e-028
gb|BJ544836.1|BJ544836 BJ544836 K. Sato unpublished cDNA li... 113 7e-028
gb|BM096914.2|BM096914 EBma08_SQ001_P23_R maternal, 28 DPA,... 113 7e-025
gb|BI777831.2|BI777831 EBro08_SQ002_D20_R root, 3 week, dro... 103 8e-025
gb|BM374436.1|BM374436 EBpi03_SQ003_J23_R pistil, 4 DPA, no... 104 3e-023
gb|AJ433976.1|AJ433976 AJ433976 S00002 Hordeum vulgare subs... 89 7e-021
>gb|BQ763124.1|BQ763124 EBro02_SQ007_E09_R root, 3 week, hydroponic grown, low nitrogen, cv
Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone
EBro02_SQ007_E09 5', mRNA sequence
Length = 502
Score = 184 bits (396), Expect(3) = 8e-049
Identities = 74/83 (89%), Positives = 78/83 (93%)
Frame = +1 / +1
Query: 109 QDSAAMGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC 288
++S AMGGGNAQKSKMARERN EK KGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC
Sbjct: 31 EESTAMGGGNAQKSKMARERNLEKLKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC 210
Query: 289 KEHAEARHPKNDLYQCFPHLKN* 357
KEHAEA+HPK+DL QCFPHLK *
Sbjct: 211 KEHAEAKHPKSDLVQCFPHLKQ* 279
Score = 92.3 bits (195), Expect(2) = 9e-029
Identities = 34/40 (85%), Positives = 34/40 (85%)
Frame = -1 / -3
Query: 344 WGKHW*RSFLGCLASACSLHLASEVVQMKVCMQILHWMFM 225
WGKHW RS GC ASACSLH ASEVVQMKVCM ILHWMFM
Sbjct: 266 WGKHWTRSLFGCFASACSLHFASEVVQMKVCMHILHWMFM 147
Score = 54.2 bits (112), Expect(2) = 9e-029
Identities = 21/43 (48%), Positives = 22/43 (51%)
Frame = -2 / -1
Query: 226 WPSCWPPAGCLXXXXXXXXXXXXXSWTSGRCRRPWPLNPAMEE 98
WPSCWP AG SWTS RCRRPW L P +E
Sbjct: 148 WPSCWPRAGSPCRPSASRGSSPSPSWTSERCRRPWLLIPRRDE 20
Score = 25.8 bits (50), Expect(3) = 8e-049
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +2 / +2
Query: 512 VSLLC*KPLVLCGFML 559
+SLLC L+LCGF L
Sbjct: 455 ISLLCYNILILCGFGL 502
Score = 23.1 bits (44), Expect(3) = 8e-049
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +3 / +3
Query: 492 MYCNPWLSACCA 527
+ CN LSACCA
Sbjct: 435 LLCNRPLSACCA 470
>gb|AL511285.1|AL511285 AL511285 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY07J03u 3',
mRNA sequence
Length = 524
Score = 184 bits (396), Expect(3) = 9e-049
Identities = 74/83 (89%), Positives = 78/83 (93%)
Frame = +1 / -2
Query: 109 QDSAAMGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC 288
++S AMGGGNAQKSKMARERN EK KGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC
Sbjct: 490 EESTAMGGGNAQKSKMARERNLEKLKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC 311
Query: 289 KEHAEARHPKNDLYQCFPHLKN* 357
KEHAEA+HPK+DL QCFPHLK *
Sbjct: 310 KEHAEAKHPKSDLVQCFPHLKQ* 242
Score = 92.3 bits (195), Expect(2) = 9e-029
Identities = 34/40 (85%), Positives = 34/40 (85%)
Frame = -1 / +3
Query: 344 WGKHW*RSFLGCLASACSLHLASEVVQMKVCMQILHWMFM 225
WGKHW RS GC ASACSLH ASEVVQMKVCM ILHWMFM
Sbjct: 255 WGKHWTRSLFGCFASACSLHFASEVVQMKVCMHILHWMFM 374
Score = 54.2 bits (112), Expect(2) = 9e-029
Identities = 21/43 (48%), Positives = 22/43 (51%)
Frame = -2 / +1
Query: 226 WPSCWPPAGCLXXXXXXXXXXXXXSWTSGRCRRPWPLNPAMEE 98
WPSCWP AG SWTS RCRRPW L P +E
Sbjct: 373 WPSCWPRAGSPCRPSASRGSSPSPSWTSERCRRPWLLIPRRDE 501
Score = 25.8 bits (50), Expect(3) = 9e-049
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +2 / -3
Query: 512 VSLLC*KPLVLCGFML 559
+SLLC L+LCGF L
Sbjct: 66 ISLLCYNILILCGFGL 19
Score = 23.1 bits (44), Expect(3) = 9e-049
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +3 / -1
Query: 492 MYCNPWLSACCA 527
+ CN LSACCA
Sbjct: 86 LLCNRPLSACCA 51
>gb|BG417020.2|BG417020 HVSMEk0015L16f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0015L16f, mRNA sequence
Length = 552
Score = 184 bits (396), Expect(3) = 1e-048
Identities = 74/83 (89%), Positives = 78/83 (93%)
Frame = +1 / +3
Query: 109 QDSAAMGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC 288
++S AMGGGNAQKSKMARERN EK KGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC
Sbjct: 30 EESTAMGGGNAQKSKMARERNLEKLKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC 209
Query: 289 KEHAEARHPKNDLYQCFPHLKN* 357
KEHAEA+HPK+DL QCFPHLK *
Sbjct: 210 KEHAEAKHPKSDLVQCFPHLKQ* 278
Score = 92.3 bits (195), Expect(2) = 9e-029
Identities = 34/40 (85%), Positives = 34/40 (85%)
Frame = -1 / -3
Query: 344 WGKHW*RSFLGCLASACSLHLASEVVQMKVCMQILHWMFM 225
WGKHW RS GC ASACSLH ASEVVQMKVCM ILHWMFM
Sbjct: 265 WGKHWTRSLFGCFASACSLHFASEVVQMKVCMHILHWMFM 146
Score = 54.2 bits (112), Expect(2) = 9e-029
Identities = 21/43 (48%), Positives = 22/43 (51%)
Frame = -2 / -1
Query: 226 WPSCWPPAGCLXXXXXXXXXXXXXSWTSGRCRRPWPLNPAMEE 98
WPSCWP AG SWTS RCRRPW L P +E
Sbjct: 147 WPSCWPRAGSPCRPSASRGSSPSPSWTSERCRRPWLLIPRRDE 19
Score = 25.8 bits (50), Expect(3) = 1e-048
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +2 / +1
Query: 512 VSLLC*KPLVLCGFML 559
+SLLC L+LCGF L
Sbjct: 454 ISLLCYNILILCGFGL 501
Score = 23.1 bits (44), Expect(3) = 1e-048
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +3 / +2
Query: 492 MYCNPWLSACCA 527
+ CN LSACCA
Sbjct: 434 LLCNRPLSACCA 469
>gb|BQ458766.1|BQ458766 HA04E18r HA Hordeum vulgare subsp. vulgare cDNA clone HA04E18
5-PRIME, mRNA sequence
Length = 490
Score = 184 bits (396), Expect(3) = 1e-048
Identities = 74/83 (89%), Positives = 78/83 (93%)
Frame = +1 / +3
Query: 109 QDSAAMGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC 288
++S AMGGGNAQKSKMARERN EK KGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC
Sbjct: 15 EESTAMGGGNAQKSKMARERNLEKLKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC 194
Query: 289 KEHAEARHPKNDLYQCFPHLKN* 357
KEHAEA+HPK+DL QCFPHLK *
Sbjct: 195 KEHAEAKHPKSDLVQCFPHLKQ* 263
Score = 92.3 bits (195), Expect(2) = 9e-029
Identities = 34/40 (85%), Positives = 34/40 (85%)
Frame = -1 / -1
Query: 344 WGKHW*RSFLGCLASACSLHLASEVVQMKVCMQILHWMFM 225
WGKHW RS GC ASACSLH ASEVVQMKVCM ILHWMFM
Sbjct: 250 WGKHWTRSLFGCFASACSLHFASEVVQMKVCMHILHWMFM 131
Score = 54.2 bits (112), Expect(2) = 9e-029
Identities = 21/43 (48%), Positives = 22/43 (51%)
Frame = -2 / -2
Query: 226 WPSCWPPAGCLXXXXXXXXXXXXXSWTSGRCRRPWPLNPAMEE 98
WPSCWP AG SWTS RCRRPW L P +E
Sbjct: 132 WPSCWPRAGSPCRPSASRGSSPSPSWTSERCRRPWLLIPRRDE 4
Score = 25.4 bits (49), Expect(3) = 1e-048
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +2 / +1
Query: 512 VSLLC*KPLVLCGF 553
+SLLC L+LCGF
Sbjct: 439 ISLLCYNILILCGF 480
Score = 23.1 bits (44), Expect(3) = 1e-048
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +3 / +2
Query: 492 MYCNPWLSACCA 527
+ CN LSACCA
Sbjct: 419 LLCNRPLSACCA 454
>gb|BQ766807.1|BQ766807 EBro08_SQ007_M04_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ007_M04 5', mRNA sequence
Length = 496
Score = 184 bits (396), Expect(3) = 1e-048
Identities = 74/83 (89%), Positives = 78/83 (93%)
Frame = +1 / +3
Query: 109 QDSAAMGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC 288
++S AMGGGNAQKSKMARERN EK KGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC
Sbjct: 24 EESTAMGGGNAQKSKMARERNLEKLKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC 203
Query: 289 KEHAEARHPKNDLYQCFPHLKN* 357
KEHAEA+HPK+DL QCFPHLK *
Sbjct: 204 KEHAEAKHPKSDLVQCFPHLKQ* 272
Score = 92.3 bits (195), Expect(2) = 9e-029
Identities = 34/40 (85%), Positives = 34/40 (85%)
Frame = -1 / -1
Query: 344 WGKHW*RSFLGCLASACSLHLASEVVQMKVCMQILHWMFM 225
WGKHW RS GC ASACSLH ASEVVQMKVCM ILHWMFM
Sbjct: 259 WGKHWTRSLFGCFASACSLHFASEVVQMKVCMHILHWMFM 140
Score = 54.2 bits (112), Expect(2) = 9e-029
Identities = 21/43 (48%), Positives = 22/43 (51%)
Frame = -2 / -2
Query: 226 WPSCWPPAGCLXXXXXXXXXXXXXSWTSGRCRRPWPLNPAMEE 98
WPSCWP AG SWTS RCRRPW L P +E
Sbjct: 141 WPSCWPRAGSPCRPSASRGSSPSPSWTSERCRRPWLLIPRRDE 13
Score = 25.4 bits (49), Expect(3) = 1e-048
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +2 / +1
Query: 512 VSLLC*KPLVLCGF 553
+SLLC L+LCGF
Sbjct: 448 ISLLCYNILILCGF 489
Score = 23.1 bits (44), Expect(3) = 1e-048
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +3 / +2
Query: 492 MYCNPWLSACCA 527
+ CN LSACCA
Sbjct: 428 LLCNRPLSACCA 463
>gb|BU986583.1|BU986583 HF12E22r HF Hordeum vulgare subsp. vulgare cDNA clone HF12E22
5-PRIME, mRNA sequence
Length = 496
Score = 184 bits (396), Expect(3) = 1e-048
Identities = 74/83 (89%), Positives = 78/83 (93%)
Frame = +1 / +3
Query: 109 QDSAAMGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC 288
++S AMGGGNAQKSKMARERN EK KGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC
Sbjct: 21 EESTAMGGGNAQKSKMARERNLEKLKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC 200
Query: 289 KEHAEARHPKNDLYQCFPHLKN* 357
KEHAEA+HPK+DL QCFPHLK *
Sbjct: 201 KEHAEAKHPKSDLVQCFPHLKQ* 269
Score = 92.3 bits (195), Expect(2) = 9e-029
Identities = 34/40 (85%), Positives = 34/40 (85%)
Frame = -1 / -1
Query: 344 WGKHW*RSFLGCLASACSLHLASEVVQMKVCMQILHWMFM 225
WGKHW RS GC ASACSLH ASEVVQMKVCM ILHWMFM
Sbjct: 256 WGKHWTRSLFGCFASACSLHFASEVVQMKVCMHILHWMFM 137
Score = 54.2 bits (112), Expect(2) = 9e-029
Identities = 21/43 (48%), Positives = 22/43 (51%)
Frame = -2 / -2
Query: 226 WPSCWPPAGCLXXXXXXXXXXXXXSWTSGRCRRPWPLNPAMEE 98
WPSCWP AG SWTS RCRRPW L P +E
Sbjct: 138 WPSCWPRAGSPCRPSASRGSSPSPSWTSERCRRPWLLIPRRDE 10
Score = 25.4 bits (49), Expect(3) = 1e-048
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +2 / +1
Query: 512 VSLLC*KPLVLCGF 553
+SLLC L+LCGF
Sbjct: 445 ISLLCYNILILCGF 486
Score = 23.1 bits (44), Expect(3) = 1e-048
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +3 / +2
Query: 492 MYCNPWLSACCA 527
+ CN LSACCA
Sbjct: 425 LLCNRPLSACCA 460
>gb|CA029563.1|CA029563 HZ65J06r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ65J06
5-PRIME, mRNA sequence
Length = 503
Score = 184 bits (396), Expect(3) = 1e-048
Identities = 74/83 (89%), Positives = 78/83 (93%)
Frame = +1 / +3
Query: 109 QDSAAMGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC 288
++S AMGGGNAQKSKMARERN EK KGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC
Sbjct: 21 EESTAMGGGNAQKSKMARERNLEKLKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC 200
Query: 289 KEHAEARHPKNDLYQCFPHLKN* 357
KEHAEA+HPK+DL QCFPHLK *
Sbjct: 201 KEHAEAKHPKSDLVQCFPHLKQ* 269
Score = 92.3 bits (195), Expect(2) = 9e-029
Identities = 34/40 (85%), Positives = 34/40 (85%)
Frame = -1 / -2
Query: 344 WGKHW*RSFLGCLASACSLHLASEVVQMKVCMQILHWMFM 225
WGKHW RS GC ASACSLH ASEVVQMKVCM ILHWMFM
Sbjct: 256 WGKHWTRSLFGCFASACSLHFASEVVQMKVCMHILHWMFM 137
Score = 54.2 bits (112), Expect(2) = 9e-029
Identities = 21/43 (48%), Positives = 22/43 (51%)
Frame = -2 / -3
Query: 226 WPSCWPPAGCLXXXXXXXXXXXXXSWTSGRCRRPWPLNPAMEE 98
WPSCWP AG SWTS RCRRPW L P +E
Sbjct: 138 WPSCWPRAGSPCRPSASRGSSPSPSWTSERCRRPWLLIPRRDE 10
Score = 25.4 bits (49), Expect(3) = 1e-048
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +2 / +1
Query: 512 VSLLC*KPLVLCGF 553
+SLLC L+LCGF
Sbjct: 445 ISLLCYNILILCGF 486
Score = 23.1 bits (44), Expect(3) = 1e-048
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +3 / +2
Query: 492 MYCNPWLSACCA 527
+ CN LSACCA
Sbjct: 425 LLCNRPLSACCA 460
>gb|BQ759939.1|BQ759939 EBpi05_SQ004_M20_R pistil, 8 DPA, no treatment, cv Optic, EBpi05
Hordeum vulgare subsp. vulgare cDNA clone
EBpi05_SQ004_M20 5', mRNA sequence
Length = 504
Score = 184 bits (396), Expect(3) = 1e-048
Identities = 74/83 (89%), Positives = 78/83 (93%)
Frame = +1 / +3
Query: 109 QDSAAMGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC 288
++S AMGGGNAQKSKMARERN EK KGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC
Sbjct: 33 EESTAMGGGNAQKSKMARERNLEKLKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC 212
Query: 289 KEHAEARHPKNDLYQCFPHLKN* 357
KEHAEA+HPK+DL QCFPHLK *
Sbjct: 213 KEHAEAKHPKSDLVQCFPHLKQ* 281
Score = 92.3 bits (195), Expect(2) = 9e-029
Identities = 34/40 (85%), Positives = 34/40 (85%)
Frame = -1 / -3
Query: 344 WGKHW*RSFLGCLASACSLHLASEVVQMKVCMQILHWMFM 225
WGKHW RS GC ASACSLH ASEVVQMKVCM ILHWMFM
Sbjct: 268 WGKHWTRSLFGCFASACSLHFASEVVQMKVCMHILHWMFM 149
Score = 54.2 bits (112), Expect(2) = 9e-029
Identities = 21/43 (48%), Positives = 22/43 (51%)
Frame = -2 / -1
Query: 226 WPSCWPPAGCLXXXXXXXXXXXXXSWTSGRCRRPWPLNPAMEE 98
WPSCWP AG SWTS RCRRPW L P +E
Sbjct: 150 WPSCWPRAGSPCRPSASRGSSPSPSWTSERCRRPWLLIPRRDE 22
Score = 25.4 bits (49), Expect(3) = 1e-048
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +2 / +1
Query: 512 VSLLC*KPLVLCGF 553
+SLLC L+LCGF
Sbjct: 457 ISLLCYNILILCGF 498
Score = 23.1 bits (44), Expect(3) = 1e-048
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +3 / +2
Query: 492 MYCNPWLSACCA 527
+ CN LSACCA
Sbjct: 437 LLCNRPLSACCA 472
>gb|AV924567.1|AV924567 AV924567 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd16b07 5', mRNA sequence
Length = 508
Score = 184 bits (396), Expect(3) = 1e-048
Identities = 74/83 (89%), Positives = 78/83 (93%)
Frame = +1 / +1
Query: 109 QDSAAMGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC 288
++S AMGGGNAQKSKMARERN EK KGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC
Sbjct: 16 EESTAMGGGNAQKSKMARERNLEKLKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC 195
Query: 289 KEHAEARHPKNDLYQCFPHLKN* 357
KEHAEA+HPK+DL QCFPHLK *
Sbjct: 196 KEHAEAKHPKSDLVQCFPHLKQ* 264
Score = 92.3 bits (195), Expect(2) = 9e-029
Identities = 34/40 (85%), Positives = 34/40 (85%)
Frame = -1 / -3
Query: 344 WGKHW*RSFLGCLASACSLHLASEVVQMKVCMQILHWMFM 225
WGKHW RS GC ASACSLH ASEVVQMKVCM ILHWMFM
Sbjct: 251 WGKHWTRSLFGCFASACSLHFASEVVQMKVCMHILHWMFM 132
Score = 54.2 bits (112), Expect(2) = 9e-029
Identities = 21/43 (48%), Positives = 22/43 (51%)
Frame = -2 / -1
Query: 226 WPSCWPPAGCLXXXXXXXXXXXXXSWTSGRCRRPWPLNPAMEE 98
WPSCWP AG SWTS RCRRPW L P +E
Sbjct: 133 WPSCWPRAGSPCRPSASRGSSPSPSWTSERCRRPWLLIPRRDE 5
Score = 25.4 bits (49), Expect(3) = 1e-048
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +2 / +2
Query: 512 VSLLC*KPLVLCGF 553
+SLLC L+LCGF
Sbjct: 440 ISLLCYNILILCGF 481
Score = 23.1 bits (44), Expect(3) = 1e-048
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +3 / +3
Query: 492 MYCNPWLSACCA 527
+ CN LSACCA
Sbjct: 420 LLCNRPLSACCA 455
>gb|BQ764563.1|BQ764563 EBca01_SQ004_B09_R carpel, pre-anthesis, no treatment, cv Optic,
EBca01 Hordeum vulgare subsp. vulgare cDNA clone
EBca01_SQ004_B09 5', mRNA sequence
Length = 509
Score = 184 bits (396), Expect(3) = 1e-048
Identities = 74/83 (89%), Positives = 78/83 (93%)
Frame = +1 / +3
Query: 109 QDSAAMGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC 288
++S AMGGGNAQKSKMARERN EK KGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC
Sbjct: 33 EESTAMGGGNAQKSKMARERNLEKLKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC 212
Query: 289 KEHAEARHPKNDLYQCFPHLKN* 357
KEHAEA+HPK+DL QCFPHLK *
Sbjct: 213 KEHAEAKHPKSDLVQCFPHLKQ* 281
Score = 92.3 bits (195), Expect(2) = 9e-029
Identities = 34/40 (85%), Positives = 34/40 (85%)
Frame = -1 / -2
Query: 344 WGKHW*RSFLGCLASACSLHLASEVVQMKVCMQILHWMFM 225
WGKHW RS GC ASACSLH ASEVVQMKVCM ILHWMFM
Sbjct: 268 WGKHWTRSLFGCFASACSLHFASEVVQMKVCMHILHWMFM 149
Score = 54.2 bits (112), Expect(2) = 9e-029
Identities = 21/43 (48%), Positives = 22/43 (51%)
Frame = -2 / -3
Query: 226 WPSCWPPAGCLXXXXXXXXXXXXXSWTSGRCRRPWPLNPAMEE 98
WPSCWP AG SWTS RCRRPW L P +E
Sbjct: 150 WPSCWPRAGSPCRPSASRGSSPSPSWTSERCRRPWLLIPRRDE 22
Score = 25.4 bits (49), Expect(3) = 1e-048
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +2 / +1
Query: 512 VSLLC*KPLVLCGF 553
+SLLC L+LCGF
Sbjct: 457 ISLLCYNILILCGF 498
Score = 23.1 bits (44), Expect(3) = 1e-048
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +3 / +2
Query: 492 MYCNPWLSACCA 527
+ CN LSACCA
Sbjct: 437 LLCNRPLSACCA 472
>gb|BQ764891.1|BQ764891 EBca01_SQ005_N05_R carpel, pre-anthesis, no treatment, cv Optic,
EBca01 Hordeum vulgare subsp. vulgare cDNA clone
EBca01_SQ005_N05 5', mRNA sequence
Length = 507
Score = 184 bits (396), Expect(3) = 1e-048
Identities = 74/83 (89%), Positives = 78/83 (93%)
Frame = +1 / +3
Query: 109 QDSAAMGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC 288
++S AMGGGNAQKSKMARERN EK KGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC
Sbjct: 24 EESTAMGGGNAQKSKMARERNLEKLKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC 203
Query: 289 KEHAEARHPKNDLYQCFPHLKN* 357
KEHAEA+HPK+DL QCFPHLK *
Sbjct: 204 KEHAEAKHPKSDLVQCFPHLKQ* 272
Score = 92.3 bits (195), Expect(2) = 9e-029
Identities = 34/40 (85%), Positives = 34/40 (85%)
Frame = -1 / -3
Query: 344 WGKHW*RSFLGCLASACSLHLASEVVQMKVCMQILHWMFM 225
WGKHW RS GC ASACSLH ASEVVQMKVCM ILHWMFM
Sbjct: 259 WGKHWTRSLFGCFASACSLHFASEVVQMKVCMHILHWMFM 140
Score = 54.2 bits (112), Expect(2) = 9e-029
Identities = 21/43 (48%), Positives = 22/43 (51%)
Frame = -2 / -1
Query: 226 WPSCWPPAGCLXXXXXXXXXXXXXSWTSGRCRRPWPLNPAMEE 98
WPSCWP AG SWTS RCRRPW L P +E
Sbjct: 141 WPSCWPRAGSPCRPSASRGSSPSPSWTSERCRRPWLLIPRRDE 13
Score = 25.4 bits (49), Expect(3) = 1e-048
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +2 / +1
Query: 512 VSLLC*KPLVLCGF 553
+SLLC L+LCGF
Sbjct: 448 ISLLCYNILILCGF 489
Score = 23.1 bits (44), Expect(3) = 1e-048
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +3 / +2
Query: 492 MYCNPWLSACCA 527
+ CN LSACCA
Sbjct: 428 LLCNRPLSACCA 463
>gb|BU986770.1|BU986770 HF12N15r HF Hordeum vulgare subsp. vulgare cDNA clone HF12N15
5-PRIME, mRNA sequence
Length = 508
Score = 184 bits (396), Expect(3) = 1e-048
Identities = 74/83 (89%), Positives = 78/83 (93%)
Frame = +1 / +3
Query: 109 QDSAAMGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC 288
++S AMGGGNAQKSKMARERN EK KGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC
Sbjct: 33 EESTAMGGGNAQKSKMARERNLEKLKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC 212
Query: 289 KEHAEARHPKNDLYQCFPHLKN* 357
KEHAEA+HPK+DL QCFPHLK *
Sbjct: 213 KEHAEAKHPKSDLVQCFPHLKQ* 281
Score = 92.3 bits (195), Expect(2) = 9e-029
Identities = 34/40 (85%), Positives = 34/40 (85%)
Frame = -1 / -1
Query: 344 WGKHW*RSFLGCLASACSLHLASEVVQMKVCMQILHWMFM 225
WGKHW RS GC ASACSLH ASEVVQMKVCM ILHWMFM
Sbjct: 268 WGKHWTRSLFGCFASACSLHFASEVVQMKVCMHILHWMFM 149
Score = 54.2 bits (112), Expect(2) = 9e-029
Identities = 21/43 (48%), Positives = 22/43 (51%)
Frame = -2 / -2
Query: 226 WPSCWPPAGCLXXXXXXXXXXXXXSWTSGRCRRPWPLNPAMEE 98
WPSCWP AG SWTS RCRRPW L P +E
Sbjct: 150 WPSCWPRAGSPCRPSASRGSSPSPSWTSERCRRPWLLIPRRDE 22
Score = 25.4 bits (49), Expect(3) = 1e-048
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +2 / +1
Query: 512 VSLLC*KPLVLCGF 553
+SLLC L+LCGF
Sbjct: 457 ISLLCYNILILCGF 498
Score = 23.1 bits (44), Expect(3) = 1e-048
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +3 / +2
Query: 492 MYCNPWLSACCA 527
+ CN LSACCA
Sbjct: 437 LLCNRPLSACCA 472
>gb|BU994476.1|BU994476 HM07D06r HM Hordeum vulgare subsp. vulgare cDNA clone HM07D06
5-PRIME, mRNA sequence
Length = 509
Score = 184 bits (396), Expect(3) = 1e-048
Identities = 74/83 (89%), Positives = 78/83 (93%)
Frame = +1 / +3
Query: 109 QDSAAMGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC 288
++S AMGGGNAQKSKMARERN EK KGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC
Sbjct: 39 EESTAMGGGNAQKSKMARERNLEKLKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC 218
Query: 289 KEHAEARHPKNDLYQCFPHLKN* 357
KEHAEA+HPK+DL QCFPHLK *
Sbjct: 219 KEHAEAKHPKSDLVQCFPHLKQ* 287
Score = 92.3 bits (195), Expect(2) = 9e-029
Identities = 34/40 (85%), Positives = 34/40 (85%)
Frame = -1 / -2
Query: 344 WGKHW*RSFLGCLASACSLHLASEVVQMKVCMQILHWMFM 225
WGKHW RS GC ASACSLH ASEVVQMKVCM ILHWMFM
Sbjct: 274 WGKHWTRSLFGCFASACSLHFASEVVQMKVCMHILHWMFM 155
Score = 54.2 bits (112), Expect(2) = 9e-029
Identities = 21/43 (48%), Positives = 22/43 (51%)
Frame = -2 / -3
Query: 226 WPSCWPPAGCLXXXXXXXXXXXXXSWTSGRCRRPWPLNPAMEE 98
WPSCWP AG SWTS RCRRPW L P +E
Sbjct: 156 WPSCWPRAGSPCRPSASRGSSPSPSWTSERCRRPWLLIPRRDE 28
Score = 25.4 bits (49), Expect(3) = 1e-048
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +2 / +1
Query: 512 VSLLC*KPLVLCGF 553
+SLLC L+LCGF
Sbjct: 463 ISLLCYNILILCGF 504
Score = 23.1 bits (44), Expect(3) = 1e-048
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +3 / +2
Query: 492 MYCNPWLSACCA 527
+ CN LSACCA
Sbjct: 443 LLCNRPLSACCA 478
>gb|CB880006.1|CB880006 HM05D06w HM Hordeum vulgare subsp. vulgare cDNA clone HM05D06
3-PRIME, mRNA sequence
Length = 509
Score = 184 bits (396), Expect(3) = 1e-048
Identities = 74/83 (89%), Positives = 78/83 (93%)
Frame = +1 / -3
Query: 109 QDSAAMGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC 288
++S AMGGGNAQKSKMARERN EK KGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC
Sbjct: 471 EESTAMGGGNAQKSKMARERNLEKLKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC 292
Query: 289 KEHAEARHPKNDLYQCFPHLKN* 357
KEHAEA+HPK+DL QCFPHLK *
Sbjct: 291 KEHAEAKHPKSDLVQCFPHLKQ* 223
Score = 92.3 bits (195), Expect(2) = 9e-029
Identities = 34/40 (85%), Positives = 34/40 (85%)
Frame = -1 / +2
Query: 344 WGKHW*RSFLGCLASACSLHLASEVVQMKVCMQILHWMFM 225
WGKHW RS GC ASACSLH ASEVVQMKVCM ILHWMFM
Sbjct: 236 WGKHWTRSLFGCFASACSLHFASEVVQMKVCMHILHWMFM 355
Score = 54.2 bits (112), Expect(2) = 9e-029
Identities = 21/43 (48%), Positives = 22/43 (51%)
Frame = -2 / +3
Query: 226 WPSCWPPAGCLXXXXXXXXXXXXXSWTSGRCRRPWPLNPAMEE 98
WPSCWP AG SWTS RCRRPW L P +E
Sbjct: 354 WPSCWPRAGSPCRPSASRGSSPSPSWTSERCRRPWLLIPRRDE 482
Score = 25.4 bits (49), Expect(3) = 1e-048
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +2 / -1
Query: 512 VSLLC*KPLVLCGF 553
+SLLC L+LCGF
Sbjct: 47 ISLLCYNILILCGF 6
Score = 23.1 bits (44), Expect(3) = 1e-048
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +3 / -2
Query: 492 MYCNPWLSACCA 527
+ CN LSACCA
Sbjct: 67 LLCNRPLSACCA 32
>gb|BM098106.2|BM098106 EBpi03_SQ002_J03_R pistil, 4 DPA, no treatment, cv Optic, EBpi03
Hordeum vulgare subsp. vulgare cDNA clone
EBpi03_SQ002_J03 5', mRNA sequence
Length = 511
Score = 184 bits (396), Expect(3) = 1e-048
Identities = 74/83 (89%), Positives = 78/83 (93%)
Frame = +1 / +3
Query: 109 QDSAAMGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC 288
++S AMGGGNAQKSKMARERN EK KGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC
Sbjct: 24 EESTAMGGGNAQKSKMARERNLEKLKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC 203
Query: 289 KEHAEARHPKNDLYQCFPHLKN* 357
KEHAEA+HPK+DL QCFPHLK *
Sbjct: 204 KEHAEAKHPKSDLVQCFPHLKQ* 272
Score = 92.3 bits (195), Expect(2) = 9e-029
Identities = 34/40 (85%), Positives = 34/40 (85%)
Frame = -1 / -1
Query: 344 WGKHW*RSFLGCLASACSLHLASEVVQMKVCMQILHWMFM 225
WGKHW RS GC ASACSLH ASEVVQMKVCM ILHWMFM
Sbjct: 259 WGKHWTRSLFGCFASACSLHFASEVVQMKVCMHILHWMFM 140
Score = 54.2 bits (112), Expect(2) = 9e-029
Identities = 21/43 (48%), Positives = 22/43 (51%)
Frame = -2 / -2
Query: 226 WPSCWPPAGCLXXXXXXXXXXXXXSWTSGRCRRPWPLNPAMEE 98
WPSCWP AG SWTS RCRRPW L P +E
Sbjct: 141 WPSCWPRAGSPCRPSASRGSSPSPSWTSERCRRPWLLIPRRDE 13
Score = 25.4 bits (49), Expect(3) = 1e-048
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +2 / +1
Query: 512 VSLLC*KPLVLCGF 553
+SLLC L+LCGF
Sbjct: 448 ISLLCYNILILCGF 489
Score = 23.1 bits (44), Expect(3) = 1e-048
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +3 / +2
Query: 492 MYCNPWLSACCA 527
+ CN LSACCA
Sbjct: 428 LLCNRPLSACCA 463
>gb|BQ764164.1|BQ764164 EBan01_SQ005_E04 _R anther, yellow stage, no treatment, cv Optic,
EBan01 Hordeum vulgare subsp. vulgare cDNA clone
EBan01_SQ005_E04 5', mRNA sequence
Length = 511
Score = 184 bits (396), Expect(3) = 1e-048
Identities = 74/83 (89%), Positives = 78/83 (93%)
Frame = +1 / +3
Query: 109 QDSAAMGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC 288
++S AMGGGNAQKSKMARERN EK KGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC
Sbjct: 39 EESTAMGGGNAQKSKMARERNLEKLKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC 218
Query: 289 KEHAEARHPKNDLYQCFPHLKN* 357
KEHAEA+HPK+DL QCFPHLK *
Sbjct: 219 KEHAEAKHPKSDLVQCFPHLKQ* 287
Score = 92.3 bits (195), Expect(2) = 9e-029
Identities = 34/40 (85%), Positives = 34/40 (85%)
Frame = -1 / -1
Query: 344 WGKHW*RSFLGCLASACSLHLASEVVQMKVCMQILHWMFM 225
WGKHW RS GC ASACSLH ASEVVQMKVCM ILHWMFM
Sbjct: 274 WGKHWTRSLFGCFASACSLHFASEVVQMKVCMHILHWMFM 155
Score = 54.2 bits (112), Expect(2) = 9e-029
Identities = 21/43 (48%), Positives = 22/43 (51%)
Frame = -2 / -2
Query: 226 WPSCWPPAGCLXXXXXXXXXXXXXSWTSGRCRRPWPLNPAMEE 98
WPSCWP AG SWTS RCRRPW L P +E
Sbjct: 156 WPSCWPRAGSPCRPSASRGSSPSPSWTSERCRRPWLLIPRRDE 28
Score = 25.4 bits (49), Expect(3) = 1e-048
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +2 / +1
Query: 512 VSLLC*KPLVLCGF 553
+SLLC L+LCGF
Sbjct: 463 ISLLCYNILILCGF 504
Score = 23.1 bits (44), Expect(3) = 1e-048
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +3 / +2
Query: 492 MYCNPWLSACCA 527
+ CN LSACCA
Sbjct: 443 LLCNRPLSACCA 478
>gb|BU977132.1|BU977132 HA10O07r HA Hordeum vulgare subsp. vulgare cDNA clone HA10O07
5-PRIME, mRNA sequence
Length = 515
Score = 184 bits (396), Expect(3) = 1e-048
Identities = 74/83 (89%), Positives = 78/83 (93%)
Frame = +1 / +1
Query: 109 QDSAAMGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC 288
++S AMGGGNAQKSKMARERN EK KGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC
Sbjct: 40 EESTAMGGGNAQKSKMARERNLEKLKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC 219
Query: 289 KEHAEARHPKNDLYQCFPHLKN* 357
KEHAEA+HPK+DL QCFPHLK *
Sbjct: 220 KEHAEAKHPKSDLVQCFPHLKQ* 288
Score = 92.3 bits (195), Expect(2) = 9e-029
Identities = 34/40 (85%), Positives = 34/40 (85%)
Frame = -1 / -1
Query: 344 WGKHW*RSFLGCLASACSLHLASEVVQMKVCMQILHWMFM 225
WGKHW RS GC ASACSLH ASEVVQMKVCM ILHWMFM
Sbjct: 275 WGKHWTRSLFGCFASACSLHFASEVVQMKVCMHILHWMFM 156
Score = 54.2 bits (112), Expect(2) = 9e-029
Identities = 21/43 (48%), Positives = 22/43 (51%)
Frame = -2 / -2
Query: 226 WPSCWPPAGCLXXXXXXXXXXXXXSWTSGRCRRPWPLNPAMEE 98
WPSCWP AG SWTS RCRRPW L P +E
Sbjct: 157 WPSCWPRAGSPCRPSASRGSSPSPSWTSERCRRPWLLIPRRDE 29
Score = 25.4 bits (49), Expect(3) = 1e-048
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +2 / +2
Query: 512 VSLLC*KPLVLCGF 553
+SLLC L+LCGF
Sbjct: 464 ISLLCYNILILCGF 505
Score = 23.1 bits (44), Expect(3) = 1e-048
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +3 / +3
Query: 492 MYCNPWLSACCA 527
+ CN LSACCA
Sbjct: 444 LLCNRPLSACCA 479
>gb|CV053657.1|CV053657 BNEL101g1 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL101g1 5' similar to contains EST
AU089749, mRNA sequence
Length = 513
Score = 184 bits (396), Expect(3) = 1e-048
Identities = 74/83 (89%), Positives = 78/83 (93%)
Frame = +1 / +1
Query: 109 QDSAAMGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC 288
++S AMGGGNAQKSKMARERN EK KGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC
Sbjct: 31 EESTAMGGGNAQKSKMARERNLEKLKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC 210
Query: 289 KEHAEARHPKNDLYQCFPHLKN* 357
KEHAEA+HPK+DL QCFPHLK *
Sbjct: 211 KEHAEAKHPKSDLVQCFPHLKQ* 279
Score = 92.3 bits (195), Expect(2) = 2e-029
Identities = 34/40 (85%), Positives = 34/40 (85%)
Frame = -1 / -2
Query: 344 WGKHW*RSFLGCLASACSLHLASEVVQMKVCMQILHWMFM 225
WGKHW RS GC ASACSLH ASEVVQMKVCM ILHWMFM
Sbjct: 266 WGKHWTRSLFGCFASACSLHFASEVVQMKVCMHILHWMFM 147
Score = 56.1 bits (116), Expect(2) = 2e-029
Identities = 21/46 (45%), Positives = 24/46 (52%)
Frame = -2 / -3
Query: 226 WPSCWPPAGCLXXXXXXXXXXXXXSWTSGRCRRPWPLNPAMEEAKK 89
WPSCWP AG SWTS RCRRPW L P +E ++
Sbjct: 148 WPSCWPRAGSPCRPSASRGSSPSPSWTSERCRRPWLLIPRRDETRR 11
Score = 25.4 bits (49), Expect(3) = 1e-048
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +2 / +2
Query: 512 VSLLC*KPLVLCGF 553
+SLLC L+LCGF
Sbjct: 455 ISLLCYNILILCGF 496
Score = 23.1 bits (44), Expect(3) = 1e-048
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +3 / +3
Query: 492 MYCNPWLSACCA 527
+ CN LSACCA
Sbjct: 435 LLCNRPLSACCA 470
>gb|BQ766378.1|BQ766378 EBro08_SQ005_G20_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ005_G20 5', mRNA sequence
Length = 516
Score = 184 bits (396), Expect(3) = 1e-048
Identities = 74/83 (89%), Positives = 78/83 (93%)
Frame = +1 / +3
Query: 109 QDSAAMGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC 288
++S AMGGGNAQKSKMARERN EK KGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC
Sbjct: 33 EESTAMGGGNAQKSKMARERNLEKLKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC 212
Query: 289 KEHAEARHPKNDLYQCFPHLKN* 357
KEHAEA+HPK+DL QCFPHLK *
Sbjct: 213 KEHAEAKHPKSDLVQCFPHLKQ* 281
Score = 92.3 bits (195), Expect(2) = 9e-029
Identities = 34/40 (85%), Positives = 34/40 (85%)
Frame = -1 / -3
Query: 344 WGKHW*RSFLGCLASACSLHLASEVVQMKVCMQILHWMFM 225
WGKHW RS GC ASACSLH ASEVVQMKVCM ILHWMFM
Sbjct: 268 WGKHWTRSLFGCFASACSLHFASEVVQMKVCMHILHWMFM 149
Score = 54.2 bits (112), Expect(2) = 9e-029
Identities = 21/43 (48%), Positives = 22/43 (51%)
Frame = -2 / -1
Query: 226 WPSCWPPAGCLXXXXXXXXXXXXXSWTSGRCRRPWPLNPAMEE 98
WPSCWP AG SWTS RCRRPW L P +E
Sbjct: 150 WPSCWPRAGSPCRPSASRGSSPSPSWTSERCRRPWLLIPRRDE 22
Score = 25.4 bits (49), Expect(3) = 1e-048
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +2 / +1
Query: 512 VSLLC*KPLVLCGF 553
+SLLC L+LCGF
Sbjct: 457 ISLLCYNILILCGF 498
Score = 23.1 bits (44), Expect(3) = 1e-048
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +3 / +2
Query: 492 MYCNPWLSACCA 527
+ CN LSACCA
Sbjct: 437 LLCNRPLSACCA 472
>gb|BU977133.1|BU977133 HA10O07u HA Hordeum vulgare subsp. vulgare cDNA clone HA10O07
3-PRIME, mRNA sequence
Length = 517
Score = 184 bits (396), Expect(3) = 1e-048
Identities = 74/83 (89%), Positives = 78/83 (93%)
Frame = +1 / -3
Query: 109 QDSAAMGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC 288
++S AMGGGNAQKSKMARERN EK KGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC
Sbjct: 476 EESTAMGGGNAQKSKMARERNLEKLKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC 297
Query: 289 KEHAEARHPKNDLYQCFPHLKN* 357
KEHAEA+HPK+DL QCFPHLK *
Sbjct: 296 KEHAEAKHPKSDLVQCFPHLKQ* 228
Score = 92.3 bits (195), Expect(2) = 9e-029
Identities = 34/40 (85%), Positives = 34/40 (85%)
Frame = -1 / +1
Query: 344 WGKHW*RSFLGCLASACSLHLASEVVQMKVCMQILHWMFM 225
WGKHW RS GC ASACSLH ASEVVQMKVCM ILHWMFM
Sbjct: 241 WGKHWTRSLFGCFASACSLHFASEVVQMKVCMHILHWMFM 360
Score = 54.2 bits (112), Expect(2) = 9e-029
Identities = 21/43 (48%), Positives = 22/43 (51%)
Frame = -2 / +2
Query: 226 WPSCWPPAGCLXXXXXXXXXXXXXSWTSGRCRRPWPLNPAMEE 98
WPSCWP AG SWTS RCRRPW L P +E
Sbjct: 359 WPSCWPRAGSPCRPSASRGSSPSPSWTSERCRRPWLLIPRRDE 487
Score = 25.4 bits (49), Expect(3) = 1e-048
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +2 / -1
Query: 512 VSLLC*KPLVLCGF 553
+SLLC L+LCGF
Sbjct: 52 ISLLCYNILILCGF 11
Score = 23.1 bits (44), Expect(3) = 1e-048
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +3 / -2
Query: 492 MYCNPWLSACCA 527
+ CN LSACCA
Sbjct: 72 LLCNRPLSACCA 37
>gb|CA026043.1|CA026043 HZ53O20r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ53O20
5-PRIME, mRNA sequence
Length = 517
Score = 184 bits (396), Expect(3) = 1e-048
Identities = 74/83 (89%), Positives = 78/83 (93%)
Frame = +1 / +3
Query: 109 QDSAAMGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC 288
++S AMGGGNAQKSKMARERN EK KGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC
Sbjct: 42 EESTAMGGGNAQKSKMARERNLEKLKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC 221
Query: 289 KEHAEARHPKNDLYQCFPHLKN* 357
KEHAEA+HPK+DL QCFPHLK *
Sbjct: 222 KEHAEAKHPKSDLVQCFPHLKQ* 290
Score = 92.3 bits (195), Expect(2) = 9e-029
Identities = 34/40 (85%), Positives = 34/40 (85%)
Frame = -1 / -1
Query: 344 WGKHW*RSFLGCLASACSLHLASEVVQMKVCMQILHWMFM 225
WGKHW RS GC ASACSLH ASEVVQMKVCM ILHWMFM
Sbjct: 277 WGKHWTRSLFGCFASACSLHFASEVVQMKVCMHILHWMFM 158
Score = 54.2 bits (112), Expect(2) = 9e-029
Identities = 21/43 (48%), Positives = 22/43 (51%)
Frame = -2 / -2
Query: 226 WPSCWPPAGCLXXXXXXXXXXXXXSWTSGRCRRPWPLNPAMEE 98
WPSCWP AG SWTS RCRRPW L P +E
Sbjct: 159 WPSCWPRAGSPCRPSASRGSSPSPSWTSERCRRPWLLIPRRDE 31
Score = 25.4 bits (49), Expect(3) = 1e-048
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +2 / +1
Query: 512 VSLLC*KPLVLCGF 553
+SLLC L+LCGF
Sbjct: 466 ISLLCYNILILCGF 507
Score = 23.1 bits (44), Expect(3) = 1e-048
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +3 / +2
Query: 492 MYCNPWLSACCA 527
+ CN LSACCA
Sbjct: 446 LLCNRPLSACCA 481
>gb|BM373095.2|BM373095 EBma04_SQ003_B07_R maternal, 10 DPA, no treatment, cv Optic, EBma04
Hordeum vulgare subsp. vulgare cDNA clone
EBma04_SQ003_B07 5', mRNA sequence
Length = 520
Score = 184 bits (396), Expect(3) = 1e-048
Identities = 74/83 (89%), Positives = 78/83 (93%)
Frame = +1 / +1
Query: 109 QDSAAMGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC 288
++S AMGGGNAQKSKMARERN EK KGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC
Sbjct: 37 EESTAMGGGNAQKSKMARERNLEKLKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC 216
Query: 289 KEHAEARHPKNDLYQCFPHLKN* 357
KEHAEA+HPK+DL QCFPHLK *
Sbjct: 217 KEHAEAKHPKSDLVQCFPHLKQ* 285
Score = 92.3 bits (195), Expect(2) = 9e-029
Identities = 34/40 (85%), Positives = 34/40 (85%)
Frame = -1 / -3
Query: 344 WGKHW*RSFLGCLASACSLHLASEVVQMKVCMQILHWMFM 225
WGKHW RS GC ASACSLH ASEVVQMKVCM ILHWMFM
Sbjct: 272 WGKHWTRSLFGCFASACSLHFASEVVQMKVCMHILHWMFM 153
Score = 54.2 bits (112), Expect(2) = 9e-029
Identities = 21/43 (48%), Positives = 22/43 (51%)
Frame = -2 / -1
Query: 226 WPSCWPPAGCLXXXXXXXXXXXXXSWTSGRCRRPWPLNPAMEE 98
WPSCWP AG SWTS RCRRPW L P +E
Sbjct: 154 WPSCWPRAGSPCRPSASRGSSPSPSWTSERCRRPWLLIPRRDE 26
Score = 25.4 bits (49), Expect(3) = 1e-048
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +2 / +2
Query: 512 VSLLC*KPLVLCGF 553
+SLLC L+LCGF
Sbjct: 461 ISLLCYNILILCGF 502
Score = 23.1 bits (44), Expect(3) = 1e-048
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +3 / +3
Query: 492 MYCNPWLSACCA 527
+ CN LSACCA
Sbjct: 441 LLCNRPLSACCA 476
>gb|BM373452.2|BM373452 EBma04_SQ004_H21_R maternal, 10 DPA, no treatment, cv Optic, EBma04
Hordeum vulgare subsp. vulgare cDNA clone
EBma04_SQ004_H21 5', mRNA sequence
Length = 520
Score = 184 bits (396), Expect(3) = 1e-048
Identities = 74/83 (89%), Positives = 78/83 (93%)
Frame = +1 / +1
Query: 109 QDSAAMGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC 288
++S AMGGGNAQKSKMARERN EK KGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC
Sbjct: 37 EESTAMGGGNAQKSKMARERNLEKLKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC 216
Query: 289 KEHAEARHPKNDLYQCFPHLKN* 357
KEHAEA+HPK+DL QCFPHLK *
Sbjct: 217 KEHAEAKHPKSDLVQCFPHLKQ* 285
Score = 92.3 bits (195), Expect(2) = 9e-029
Identities = 34/40 (85%), Positives = 34/40 (85%)
Frame = -1 / -3
Query: 344 WGKHW*RSFLGCLASACSLHLASEVVQMKVCMQILHWMFM 225
WGKHW RS GC ASACSLH ASEVVQMKVCM ILHWMFM
Sbjct: 272 WGKHWTRSLFGCFASACSLHFASEVVQMKVCMHILHWMFM 153
Score = 54.2 bits (112), Expect(2) = 9e-029
Identities = 21/43 (48%), Positives = 22/43 (51%)
Frame = -2 / -1
Query: 226 WPSCWPPAGCLXXXXXXXXXXXXXSWTSGRCRRPWPLNPAMEE 98
WPSCWP AG SWTS RCRRPW L P +E
Sbjct: 154 WPSCWPRAGSPCRPSASRGSSPSPSWTSERCRRPWLLIPRRDE 26
Score = 25.4 bits (49), Expect(3) = 1e-048
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +2 / +2
Query: 512 VSLLC*KPLVLCGF 553
+SLLC L+LCGF
Sbjct: 461 ISLLCYNILILCGF 502
Score = 23.1 bits (44), Expect(3) = 1e-048
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +3 / +3
Query: 492 MYCNPWLSACCA 527
+ CN LSACCA
Sbjct: 441 LLCNRPLSACCA 476
>gb|BM371901.2|BM371901 EBma08_SQ004_G03_R maternal, 28 DPA, no treatment, cv Optic, EBma08
Hordeum vulgare subsp. vulgare cDNA clone
EBma08_SQ004_G03 5', mRNA sequence
Length = 519
Score = 184 bits (396), Expect(3) = 1e-048
Identities = 74/83 (89%), Positives = 78/83 (93%)
Frame = +1 / +3
Query: 109 QDSAAMGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC 288
++S AMGGGNAQKSKMARERN EK KGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC
Sbjct: 24 EESTAMGGGNAQKSKMARERNLEKLKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC 203
Query: 289 KEHAEARHPKNDLYQCFPHLKN* 357
KEHAEA+HPK+DL QCFPHLK *
Sbjct: 204 KEHAEAKHPKSDLVQCFPHLKQ* 272
Score = 92.3 bits (195), Expect(2) = 9e-029
Identities = 34/40 (85%), Positives = 34/40 (85%)
Frame = -1 / -3
Query: 344 WGKHW*RSFLGCLASACSLHLASEVVQMKVCMQILHWMFM 225
WGKHW RS GC ASACSLH ASEVVQMKVCM ILHWMFM
Sbjct: 259 WGKHWTRSLFGCFASACSLHFASEVVQMKVCMHILHWMFM 140
Score = 54.2 bits (112), Expect(2) = 9e-029
Identities = 21/43 (48%), Positives = 22/43 (51%)
Frame = -2 / -1
Query: 226 WPSCWPPAGCLXXXXXXXXXXXXXSWTSGRCRRPWPLNPAMEE 98
WPSCWP AG SWTS RCRRPW L P +E
Sbjct: 141 WPSCWPRAGSPCRPSASRGSSPSPSWTSERCRRPWLLIPRRDE 13
Score = 25.4 bits (49), Expect(3) = 1e-048
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +2 / +1
Query: 512 VSLLC*KPLVLCGF 553
+SLLC L+LCGF
Sbjct: 448 ISLLCYNILILCGF 489
Score = 23.1 bits (44), Expect(3) = 1e-048
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +3 / +2
Query: 492 MYCNPWLSACCA 527
+ CN LSACCA
Sbjct: 428 LLCNRPLSACCA 463
>gb|BU978911.1|BU978911 HA14J22r HA Hordeum vulgare subsp. vulgare cDNA clone HA14J22
5-PRIME, mRNA sequence
Length = 521
Score = 184 bits (396), Expect(3) = 1e-048
Identities = 74/83 (89%), Positives = 78/83 (93%)
Frame = +1 / +3
Query: 109 QDSAAMGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC 288
++S AMGGGNAQKSKMARERN EK KGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC
Sbjct: 39 EESTAMGGGNAQKSKMARERNLEKLKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC 218
Query: 289 KEHAEARHPKNDLYQCFPHLKN* 357
KEHAEA+HPK+DL QCFPHLK *
Sbjct: 219 KEHAEAKHPKSDLVQCFPHLKQ* 287
Score = 92.3 bits (195), Expect(2) = 9e-029
Identities = 34/40 (85%), Positives = 34/40 (85%)
Frame = -1 / -2
Query: 344 WGKHW*RSFLGCLASACSLHLASEVVQMKVCMQILHWMFM 225
WGKHW RS GC ASACSLH ASEVVQMKVCM ILHWMFM
Sbjct: 274 WGKHWTRSLFGCFASACSLHFASEVVQMKVCMHILHWMFM 155
Score = 54.2 bits (112), Expect(2) = 9e-029
Identities = 21/43 (48%), Positives = 22/43 (51%)
Frame = -2 / -3
Query: 226 WPSCWPPAGCLXXXXXXXXXXXXXSWTSGRCRRPWPLNPAMEE 98
WPSCWP AG SWTS RCRRPW L P +E
Sbjct: 156 WPSCWPRAGSPCRPSASRGSSPSPSWTSERCRRPWLLIPRRDE 28
Score = 25.4 bits (49), Expect(3) = 1e-048
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +2 / +1
Query: 512 VSLLC*KPLVLCGF 553
+SLLC L+LCGF
Sbjct: 463 ISLLCYNILILCGF 504
Score = 23.1 bits (44), Expect(3) = 1e-048
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +3 / +2
Query: 492 MYCNPWLSACCA 527
+ CN LSACCA
Sbjct: 443 LLCNRPLSACCA 478
>gb|AL505427.1|AL505427 AL505427 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW08G24V 5', mRNA sequence
Length = 528
Score = 184 bits (396), Expect(3) = 1e-048
Identities = 74/83 (89%), Positives = 78/83 (93%)
Frame = +1 / +1
Query: 109 QDSAAMGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC 288
++S AMGGGNAQKSKMARERN EK KGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC
Sbjct: 25 EESTAMGGGNAQKSKMARERNLEKLKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC 204
Query: 289 KEHAEARHPKNDLYQCFPHLKN* 357
KEHAEA+HPK+DL QCFPHLK *
Sbjct: 205 KEHAEAKHPKSDLVQCFPHLKQ* 273
Score = 92.3 bits (195), Expect(2) = 9e-029
Identities = 34/40 (85%), Positives = 34/40 (85%)
Frame = -1 / -2
Query: 344 WGKHW*RSFLGCLASACSLHLASEVVQMKVCMQILHWMFM 225
WGKHW RS GC ASACSLH ASEVVQMKVCM ILHWMFM
Sbjct: 260 WGKHWTRSLFGCFASACSLHFASEVVQMKVCMHILHWMFM 141
Score = 54.2 bits (112), Expect(2) = 9e-029
Identities = 21/43 (48%), Positives = 22/43 (51%)
Frame = -2 / -3
Query: 226 WPSCWPPAGCLXXXXXXXXXXXXXSWTSGRCRRPWPLNPAMEE 98
WPSCWP AG SWTS RCRRPW L P +E
Sbjct: 142 WPSCWPRAGSPCRPSASRGSSPSPSWTSERCRRPWLLIPRRDE 14
Score = 25.4 bits (49), Expect(3) = 1e-048
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +2 / +2
Query: 512 VSLLC*KPLVLCGF 553
+SLLC L+LCGF
Sbjct: 449 ISLLCYNILILCGF 490
Score = 23.1 bits (44), Expect(3) = 1e-048
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +3 / +3
Query: 492 MYCNPWLSACCA 527
+ CN LSACCA
Sbjct: 429 LLCNRPLSACCA 464
>gb|BQ764507.1|BQ764507 EBca01_SQ004_G03_R carpel, pre-anthesis, no treatment, cv Optic,
EBca01 Hordeum vulgare subsp. vulgare cDNA clone
EBca01_SQ004_G03 5', mRNA sequence
Length = 529
Score = 184 bits (396), Expect(3) = 1e-048
Identities = 74/83 (89%), Positives = 78/83 (93%)
Frame = +1 / +1
Query: 109 QDSAAMGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC 288
++S AMGGGNAQKSKMARERN EK KGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC
Sbjct: 16 EESTAMGGGNAQKSKMARERNLEKLKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC 195
Query: 289 KEHAEARHPKNDLYQCFPHLKN* 357
KEHAEA+HPK+DL QCFPHLK *
Sbjct: 196 KEHAEAKHPKSDLVQCFPHLKQ* 264
Score = 92.3 bits (195), Expect(2) = 9e-029
Identities = 34/40 (85%), Positives = 34/40 (85%)
Frame = -1 / -3
Query: 344 WGKHW*RSFLGCLASACSLHLASEVVQMKVCMQILHWMFM 225
WGKHW RS GC ASACSLH ASEVVQMKVCM ILHWMFM
Sbjct: 251 WGKHWTRSLFGCFASACSLHFASEVVQMKVCMHILHWMFM 132
Score = 54.2 bits (112), Expect(2) = 9e-029
Identities = 21/43 (48%), Positives = 22/43 (51%)
Frame = -2 / -1
Query: 226 WPSCWPPAGCLXXXXXXXXXXXXXSWTSGRCRRPWPLNPAMEE 98
WPSCWP AG SWTS RCRRPW L P +E
Sbjct: 133 WPSCWPRAGSPCRPSASRGSSPSPSWTSERCRRPWLLIPRRDE 5
Score = 25.4 bits (49), Expect(3) = 1e-048
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +2 / +2
Query: 512 VSLLC*KPLVLCGF 553
+SLLC L+LCGF
Sbjct: 440 ISLLCYNILILCGF 481
Score = 23.1 bits (44), Expect(3) = 1e-048
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +3 / +3
Query: 492 MYCNPWLSACCA 527
+ CN LSACCA
Sbjct: 420 LLCNRPLSACCA 455
>gb|BQ766679.1|BQ766679 EBro08_SQ006_G20_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ006_G20 5', mRNA sequence
Length = 529
Score = 184 bits (396), Expect(3) = 1e-048
Identities = 74/83 (89%), Positives = 78/83 (93%)
Frame = +1 / +3
Query: 109 QDSAAMGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC 288
++S AMGGGNAQKSKMARERN EK KGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC
Sbjct: 33 EESTAMGGGNAQKSKMARERNLEKLKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC 212
Query: 289 KEHAEARHPKNDLYQCFPHLKN* 357
KEHAEA+HPK+DL QCFPHLK *
Sbjct: 213 KEHAEAKHPKSDLVQCFPHLKQ* 281
Score = 92.3 bits (195), Expect(2) = 9e-029
Identities = 34/40 (85%), Positives = 34/40 (85%)
Frame = -1 / -1
Query: 344 WGKHW*RSFLGCLASACSLHLASEVVQMKVCMQILHWMFM 225
WGKHW RS GC ASACSLH ASEVVQMKVCM ILHWMFM
Sbjct: 268 WGKHWTRSLFGCFASACSLHFASEVVQMKVCMHILHWMFM 149
Score = 54.2 bits (112), Expect(2) = 9e-029
Identities = 21/43 (48%), Positives = 22/43 (51%)
Frame = -2 / -2
Query: 226 WPSCWPPAGCLXXXXXXXXXXXXXSWTSGRCRRPWPLNPAMEE 98
WPSCWP AG SWTS RCRRPW L P +E
Sbjct: 150 WPSCWPRAGSPCRPSASRGSSPSPSWTSERCRRPWLLIPRRDE 22
Score = 25.4 bits (49), Expect(3) = 1e-048
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +2 / +1
Query: 512 VSLLC*KPLVLCGF 553
+SLLC L+LCGF
Sbjct: 457 ISLLCYNILILCGF 498
Score = 23.1 bits (44), Expect(3) = 1e-048
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +3 / +2
Query: 492 MYCNPWLSACCA 527
+ CN LSACCA
Sbjct: 437 LLCNRPLSACCA 472
>gb|CV060323.1|CV060323 BNEL56h2 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL56h2 5' similar to contains EST
AU089749, mRNA sequence
Length = 536
Score = 184 bits (396), Expect(3) = 1e-048
Identities = 74/83 (89%), Positives = 78/83 (93%)
Frame = +1 / +3
Query: 109 QDSAAMGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC 288
++S AMGGGNAQKSKMARERN EK KGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC
Sbjct: 39 EESTAMGGGNAQKSKMARERNLEKLKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC 218
Query: 289 KEHAEARHPKNDLYQCFPHLKN* 357
KEHAEA+HPK+DL QCFPHLK *
Sbjct: 219 KEHAEAKHPKSDLVQCFPHLKQ* 287
Score = 92.3 bits (195), Expect(2) = 2e-029
Identities = 34/40 (85%), Positives = 34/40 (85%)
Frame = -1 / -2
Query: 344 WGKHW*RSFLGCLASACSLHLASEVVQMKVCMQILHWMFM 225
WGKHW RS GC ASACSLH ASEVVQMKVCM ILHWMFM
Sbjct: 274 WGKHWTRSLFGCFASACSLHFASEVVQMKVCMHILHWMFM 155
Score = 56.1 bits (116), Expect(2) = 2e-029
Identities = 21/46 (45%), Positives = 24/46 (52%)
Frame = -2 / -3
Query: 226 WPSCWPPAGCLXXXXXXXXXXXXXSWTSGRCRRPWPLNPAMEEAKK 89
WPSCWP AG SWTS RCRRPW L P +E ++
Sbjct: 156 WPSCWPRAGSPCRPSASRGSSPSPSWTSERCRRPWLLIPRRDETRR 19
Score = 25.4 bits (49), Expect(3) = 1e-048
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +2 / +1
Query: 512 VSLLC*KPLVLCGF 553
+SLLC L+LCGF
Sbjct: 463 ISLLCYNILILCGF 504
Score = 23.1 bits (44), Expect(3) = 1e-048
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +3 / +2
Query: 492 MYCNPWLSACCA 527
+ CN LSACCA
Sbjct: 443 LLCNRPLSACCA 478
>gb|CV058072.1|CV058072 BNEL34a5 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL34a5 5' similar to contains EST
AU089749, mRNA sequence
Length = 540
Score = 184 bits (396), Expect(3) = 1e-048
Identities = 74/83 (89%), Positives = 78/83 (93%)
Frame = +1 / +3
Query: 109 QDSAAMGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC 288
++S AMGGGNAQKSKMARERN EK KGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC
Sbjct: 39 EESTAMGGGNAQKSKMARERNLEKLKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC 218
Query: 289 KEHAEARHPKNDLYQCFPHLKN* 357
KEHAEA+HPK+DL QCFPHLK *
Sbjct: 219 KEHAEAKHPKSDLVQCFPHLKQ* 287
Score = 92.3 bits (195), Expect(2) = 2e-029
Identities = 34/40 (85%), Positives = 34/40 (85%)
Frame = -1 / -3
Query: 344 WGKHW*RSFLGCLASACSLHLASEVVQMKVCMQILHWMFM 225
WGKHW RS GC ASACSLH ASEVVQMKVCM ILHWMFM
Sbjct: 274 WGKHWTRSLFGCFASACSLHFASEVVQMKVCMHILHWMFM 155
Score = 56.1 bits (116), Expect(2) = 2e-029
Identities = 21/46 (45%), Positives = 24/46 (52%)
Frame = -2 / -1
Query: 226 WPSCWPPAGCLXXXXXXXXXXXXXSWTSGRCRRPWPLNPAMEEAKK 89
WPSCWP AG SWTS RCRRPW L P +E ++
Sbjct: 156 WPSCWPRAGSPCRPSASRGSSPSPSWTSERCRRPWLLIPRRDETRR 19
Score = 25.4 bits (49), Expect(3) = 1e-048
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +2 / +2
Query: 512 VSLLC*KPLVLCGF 553
+SLLC L+LCGF
Sbjct: 464 ISLLCYNILILCGF 505
Score = 23.1 bits (44), Expect(3) = 1e-048
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +3 / +3
Query: 492 MYCNPWLSACCA 527
+ CN LSACCA
Sbjct: 444 LLCNRPLSACCA 479
>gb|CV060618.1|CV060618 BNEL5C10 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL5C10 5' similar to contains EST
AU089749, mRNA sequence
Length = 543
Score = 184 bits (396), Expect(3) = 1e-048
Identities = 74/83 (89%), Positives = 78/83 (93%)
Frame = +1 / +1
Query: 109 QDSAAMGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC 288
++S AMGGGNAQKSKMARERN EK KGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC
Sbjct: 31 EESTAMGGGNAQKSKMARERNLEKLKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC 210
Query: 289 KEHAEARHPKNDLYQCFPHLKN* 357
KEHAEA+HPK+DL QCFPHLK *
Sbjct: 211 KEHAEAKHPKSDLVQCFPHLKQ* 279
Score = 92.3 bits (195), Expect(2) = 2e-029
Identities = 34/40 (85%), Positives = 34/40 (85%)
Frame = -1 / -2
Query: 344 WGKHW*RSFLGCLASACSLHLASEVVQMKVCMQILHWMFM 225
WGKHW RS GC ASACSLH ASEVVQMKVCM ILHWMFM
Sbjct: 266 WGKHWTRSLFGCFASACSLHFASEVVQMKVCMHILHWMFM 147
Score = 56.1 bits (116), Expect(2) = 2e-029
Identities = 21/46 (45%), Positives = 24/46 (52%)
Frame = -2 / -3
Query: 226 WPSCWPPAGCLXXXXXXXXXXXXXSWTSGRCRRPWPLNPAMEEAKK 89
WPSCWP AG SWTS RCRRPW L P +E ++
Sbjct: 148 WPSCWPRAGSPCRPSASRGSSPSPSWTSERCRRPWLLIPRRDETRR 11
Score = 25.4 bits (49), Expect(3) = 1e-048
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +2 / +2
Query: 512 VSLLC*KPLVLCGF 553
+SLLC L+LCGF
Sbjct: 455 ISLLCYNILILCGF 496
Score = 23.1 bits (44), Expect(3) = 1e-048
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +3 / +3
Query: 492 MYCNPWLSACCA 527
+ CN LSACCA
Sbjct: 435 LLCNRPLSACCA 470
>gb|CV063834.1|CV063834 BNEL93f9 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL93f9 5' similar to contains EST
AU089749, mRNA sequence
Length = 543
Score = 184 bits (396), Expect(3) = 1e-048
Identities = 74/83 (89%), Positives = 78/83 (93%)
Frame = +1 / +1
Query: 109 QDSAAMGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC 288
++S AMGGGNAQKSKMARERN EK KGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC
Sbjct: 31 EESTAMGGGNAQKSKMARERNLEKLKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC 210
Query: 289 KEHAEARHPKNDLYQCFPHLKN* 357
KEHAEA+HPK+DL QCFPHLK *
Sbjct: 211 KEHAEAKHPKSDLVQCFPHLKQ* 279
Score = 92.3 bits (195), Expect(2) = 2e-029
Identities = 34/40 (85%), Positives = 34/40 (85%)
Frame = -1 / -2
Query: 344 WGKHW*RSFLGCLASACSLHLASEVVQMKVCMQILHWMFM 225
WGKHW RS GC ASACSLH ASEVVQMKVCM ILHWMFM
Sbjct: 266 WGKHWTRSLFGCFASACSLHFASEVVQMKVCMHILHWMFM 147
Score = 56.1 bits (116), Expect(2) = 2e-029
Identities = 21/46 (45%), Positives = 24/46 (52%)
Frame = -2 / -3
Query: 226 WPSCWPPAGCLXXXXXXXXXXXXXSWTSGRCRRPWPLNPAMEEAKK 89
WPSCWP AG SWTS RCRRPW L P +E ++
Sbjct: 148 WPSCWPRAGSPCRPSASRGSSPSPSWTSERCRRPWLLIPRRDETRR 11
Score = 25.4 bits (49), Expect(3) = 1e-048
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +2 / +2
Query: 512 VSLLC*KPLVLCGF 553
+SLLC L+LCGF
Sbjct: 455 ISLLCYNILILCGF 496
Score = 23.1 bits (44), Expect(3) = 1e-048
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +3 / +3
Query: 492 MYCNPWLSACCA 527
+ CN LSACCA
Sbjct: 435 LLCNRPLSACCA 470
>gb|BE454194.3|BE454194 HVSMEh0093D11f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0093D11f, mRNA sequence
Length = 560
Score = 184 bits (396), Expect(3) = 1e-048
Identities = 74/83 (89%), Positives = 78/83 (93%)
Frame = +1 / +1
Query: 109 QDSAAMGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC 288
++S AMGGGNAQKSKMARERN EK KGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC
Sbjct: 37 EESTAMGGGNAQKSKMARERNLEKLKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC 216
Query: 289 KEHAEARHPKNDLYQCFPHLKN* 357
KEHAEA+HPK+DL QCFPHLK *
Sbjct: 217 KEHAEAKHPKSDLVQCFPHLKQ* 285
Score = 92.3 bits (195), Expect(2) = 9e-029
Identities = 34/40 (85%), Positives = 34/40 (85%)
Frame = -1 / -1
Query: 344 WGKHW*RSFLGCLASACSLHLASEVVQMKVCMQILHWMFM 225
WGKHW RS GC ASACSLH ASEVVQMKVCM ILHWMFM
Sbjct: 272 WGKHWTRSLFGCFASACSLHFASEVVQMKVCMHILHWMFM 153
Score = 54.2 bits (112), Expect(2) = 9e-029
Identities = 21/43 (48%), Positives = 22/43 (51%)
Frame = -2 / -2
Query: 226 WPSCWPPAGCLXXXXXXXXXXXXXSWTSGRCRRPWPLNPAMEE 98
WPSCWP AG SWTS RCRRPW L P +E
Sbjct: 154 WPSCWPRAGSPCRPSASRGSSPSPSWTSERCRRPWLLIPRRDE 26
Score = 25.4 bits (49), Expect(3) = 1e-048
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +2 / +2
Query: 512 VSLLC*KPLVLCGF 553
+SLLC L+LCGF
Sbjct: 470 ISLLCYNILILCGF 511
Score = 23.1 bits (44), Expect(3) = 1e-048
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +3 / +3
Query: 492 MYCNPWLSACCA 527
+ CN LSACCA
Sbjct: 450 LLCNRPLSACCA 485
>gb|AV924568.1|AV924568 AV924568 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd16b08 5', mRNA sequence
Length = 559
Score = 184 bits (396), Expect(3) = 1e-048
Identities = 74/83 (89%), Positives = 78/83 (93%)
Frame = +1 / +3
Query: 109 QDSAAMGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC 288
++S AMGGGNAQKSKMARERN EK KGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC
Sbjct: 69 EESTAMGGGNAQKSKMARERNLEKLKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC 248
Query: 289 KEHAEARHPKNDLYQCFPHLKN* 357
KEHAEA+HPK+DL QCFPHLK *
Sbjct: 249 KEHAEAKHPKSDLVQCFPHLKQ* 317
Score = 92.3 bits (195), Expect(2) = 9e-029
Identities = 34/40 (85%), Positives = 34/40 (85%)
Frame = -1 / -1
Query: 344 WGKHW*RSFLGCLASACSLHLASEVVQMKVCMQILHWMFM 225
WGKHW RS GC ASACSLH ASEVVQMKVCM ILHWMFM
Sbjct: 304 WGKHWTRSLFGCFASACSLHFASEVVQMKVCMHILHWMFM 185
Score = 54.2 bits (112), Expect(2) = 9e-029
Identities = 21/43 (48%), Positives = 22/43 (51%)
Frame = -2 / -2
Query: 226 WPSCWPPAGCLXXXXXXXXXXXXXSWTSGRCRRPWPLNPAMEE 98
WPSCWP AG SWTS RCRRPW L P +E
Sbjct: 186 WPSCWPRAGSPCRPSASRGSSPSPSWTSERCRRPWLLIPRRDE 58
Score = 25.4 bits (49), Expect(3) = 1e-048
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +2 / +1
Query: 512 VSLLC*KPLVLCGF 553
+SLLC L+LCGF
Sbjct: 493 ISLLCYNILILCGF 534
Score = 23.1 bits (44), Expect(3) = 1e-048
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +3 / +2
Query: 492 MYCNPWLSACCA 527
+ CN LSACCA
Sbjct: 473 LLCNRPLSACCA 508
>gb|CA008240.1|CA008240 HU10F12r HU Hordeum vulgare subsp. vulgare cDNA clone HU10F12
5-PRIME, mRNA sequence
Length = 560
Score = 184 bits (396), Expect(3) = 1e-048
Identities = 74/83 (89%), Positives = 78/83 (93%)
Frame = +1 / +3
Query: 109 QDSAAMGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC 288
++S AMGGGNAQKSKMARERN EK KGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC
Sbjct: 90 EESTAMGGGNAQKSKMARERNLEKLKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC 269
Query: 289 KEHAEARHPKNDLYQCFPHLKN* 357
KEHAEA+HPK+DL QCFPHLK *
Sbjct: 270 KEHAEAKHPKSDLVQCFPHLKQ* 338
Score = 92.3 bits (195), Expect(2) = 9e-029
Identities = 34/40 (85%), Positives = 34/40 (85%)
Frame = -1 / -2
Query: 344 WGKHW*RSFLGCLASACSLHLASEVVQMKVCMQILHWMFM 225
WGKHW RS GC ASACSLH ASEVVQMKVCM ILHWMFM
Sbjct: 325 WGKHWTRSLFGCFASACSLHFASEVVQMKVCMHILHWMFM 206
Score = 54.2 bits (112), Expect(2) = 9e-029
Identities = 21/43 (48%), Positives = 22/43 (51%)
Frame = -2 / -3
Query: 226 WPSCWPPAGCLXXXXXXXXXXXXXSWTSGRCRRPWPLNPAMEE 98
WPSCWP AG SWTS RCRRPW L P +E
Sbjct: 207 WPSCWPRAGSPCRPSASRGSSPSPSWTSERCRRPWLLIPRRDE 79
Score = 25.4 bits (49), Expect(3) = 1e-048
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +2 / +1
Query: 512 VSLLC*KPLVLCGF 553
+SLLC L+LCGF
Sbjct: 514 ISLLCYNILILCGF 555
Score = 23.1 bits (44), Expect(3) = 1e-048
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +3 / +2
Query: 492 MYCNPWLSACCA 527
+ CN LSACCA
Sbjct: 494 LLCNRPLSACCA 529
>gb|CA024364.1|CA024364 HZ49B16r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ49B16
5-PRIME, mRNA sequence
Length = 580
Score = 184 bits (396), Expect(3) = 2e-048
Identities = 74/83 (89%), Positives = 78/83 (93%)
Frame = +1 / +3
Query: 109 QDSAAMGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC 288
++S AMGGGNAQKSKMARERN EK KGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC
Sbjct: 87 EESTAMGGGNAQKSKMARERNLEKLKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC 266
Query: 289 KEHAEARHPKNDLYQCFPHLKN* 357
KEHAEA+HPK+DL QCFPHLK *
Sbjct: 267 KEHAEAKHPKSDLVQCFPHLKQ* 335
Score = 92.3 bits (195), Expect(2) = 9e-029
Identities = 34/40 (85%), Positives = 34/40 (85%)
Frame = -1 / -1
Query: 344 WGKHW*RSFLGCLASACSLHLASEVVQMKVCMQILHWMFM 225
WGKHW RS GC ASACSLH ASEVVQMKVCM ILHWMFM
Sbjct: 322 WGKHWTRSLFGCFASACSLHFASEVVQMKVCMHILHWMFM 203
Score = 54.2 bits (112), Expect(2) = 9e-029
Identities = 21/43 (48%), Positives = 22/43 (51%)
Frame = -2 / -2
Query: 226 WPSCWPPAGCLXXXXXXXXXXXXXSWTSGRCRRPWPLNPAMEE 98
WPSCWP AG SWTS RCRRPW L P +E
Sbjct: 204 WPSCWPRAGSPCRPSASRGSSPSPSWTSERCRRPWLLIPRRDE 76
Score = 25.4 bits (49), Expect(3) = 2e-048
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +2 / +1
Query: 512 VSLLC*KPLVLCGF 553
+SLLC L+LCGF
Sbjct: 511 ISLLCYNILILCGF 552
Score = 23.1 bits (44), Expect(3) = 2e-048
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +3 / +2
Query: 492 MYCNPWLSACCA 527
+ CN LSACCA
Sbjct: 491 LLCNRPLSACCA 526
>gb|BU982803.1|BU982803 HA27K14r HA Hordeum vulgare subsp. vulgare cDNA clone HA27K14
5-PRIME, mRNA sequence
Length = 589
Score = 184 bits (396), Expect(3) = 2e-048
Identities = 74/83 (89%), Positives = 78/83 (93%)
Frame = +1 / +3
Query: 109 QDSAAMGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC 288
++S AMGGGNAQKSKMARERN EK KGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC
Sbjct: 90 EESTAMGGGNAQKSKMARERNLEKLKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC 269
Query: 289 KEHAEARHPKNDLYQCFPHLKN* 357
KEHAEA+HPK+DL QCFPHLK *
Sbjct: 270 KEHAEAKHPKSDLVQCFPHLKQ* 338
Score = 92.3 bits (195), Expect(2) = 9e-029
Identities = 34/40 (85%), Positives = 34/40 (85%)
Frame = -1 / -1
Query: 344 WGKHW*RSFLGCLASACSLHLASEVVQMKVCMQILHWMFM 225
WGKHW RS GC ASACSLH ASEVVQMKVCM ILHWMFM
Sbjct: 325 WGKHWTRSLFGCFASACSLHFASEVVQMKVCMHILHWMFM 206
Score = 54.2 bits (112), Expect(2) = 9e-029
Identities = 21/43 (48%), Positives = 22/43 (51%)
Frame = -2 / -2
Query: 226 WPSCWPPAGCLXXXXXXXXXXXXXSWTSGRCRRPWPLNPAMEE 98
WPSCWP AG SWTS RCRRPW L P +E
Sbjct: 207 WPSCWPRAGSPCRPSASRGSSPSPSWTSERCRRPWLLIPRRDE 79
Score = 25.4 bits (49), Expect(3) = 2e-048
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +2 / +1
Query: 512 VSLLC*KPLVLCGF 553
+SLLC L+LCGF
Sbjct: 514 ISLLCYNILILCGF 555
Score = 23.1 bits (44), Expect(3) = 2e-048
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +3 / +2
Query: 492 MYCNPWLSACCA 527
+ CN LSACCA
Sbjct: 494 LLCNRPLSACCA 529
>gb|CB878510.1|CB878510 HP08M18T HP Hordeum vulgare subsp. vulgare cDNA clone HP08M18
5-PRIME, mRNA sequence
Length = 497
Score = 183 bits (394), Expect(3) = 2e-048
Identities = 74/82 (90%), Positives = 77/82 (93%)
Frame = +1 / +1
Query: 112 DSAAMGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCK 291
+S AMGGGNAQKSKMARERN EK KGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCK
Sbjct: 1 ESTAMGGGNAQKSKMARERNLEKLKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCK 180
Query: 292 EHAEARHPKNDLYQCFPHLKN* 357
EHAEA+HPK+DL QCFPHLK *
Sbjct: 181 EHAEAKHPKSDLVQCFPHLKQ* 246
Score = 92.3 bits (195), Expect(2) = 1e-027
Identities = 34/40 (85%), Positives = 34/40 (85%)
Frame = -1 / -1
Query: 344 WGKHW*RSFLGCLASACSLHLASEVVQMKVCMQILHWMFM 225
WGKHW RS GC ASACSLH ASEVVQMKVCM ILHWMFM
Sbjct: 233 WGKHWTRSLFGCFASACSLHFASEVVQMKVCMHILHWMFM 114
Score = 50.1 bits (103), Expect(2) = 1e-027
Identities = 19/37 (51%), Positives = 19/37 (51%)
Frame = -2 / -2
Query: 226 WPSCWPPAGCLXXXXXXXXXXXXXSWTSGRCRRPWPL 116
WPSCWP AG SWTS RCRRPW L
Sbjct: 115 WPSCWPRAGSPCRPSASRGSSPSPSWTSERCRRPWLL 5
Score = 25.4 bits (49), Expect(3) = 2e-048
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +2 / +2
Query: 512 VSLLC*KPLVLCGF 553
+SLLC L+LCGF
Sbjct: 422 ISLLCYNILILCGF 463
Score = 23.1 bits (44), Expect(3) = 2e-048
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +3 / +3
Query: 492 MYCNPWLSACCA 527
+ CN LSACCA
Sbjct: 402 LLCNRPLSACCA 437
>gb|BM816164.1|BM816164 HC107E09_SK.ab1 HC Hordeum vulgare subsp. vulgare cDNA clone
HC107E09_SK.ab1 similar to hypothetical protein [Cicer
arietinum],unknown protein [Arabidopsis thaliana],, mRNA
sequence
Length = 901
Score = 184 bits (396), Expect(3) = 4e-048
Identities = 74/83 (89%), Positives = 78/83 (93%)
Frame = +1 / +1
Query: 109 QDSAAMGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC 288
++S AMGGGNAQKSKMARERN EK KGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC
Sbjct: 55 EESTAMGGGNAQKSKMARERNLEKLKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC 234
Query: 289 KEHAEARHPKNDLYQCFPHLKN* 357
KEHAEA+HPK+DL QCFPHLK *
Sbjct: 235 KEHAEAKHPKSDLVQCFPHLKQ* 303
Score = 92.3 bits (195), Expect(2) = 9e-029
Identities = 34/40 (85%), Positives = 34/40 (85%)
Frame = -1 / -3
Query: 344 WGKHW*RSFLGCLASACSLHLASEVVQMKVCMQILHWMFM 225
WGKHW RS GC ASACSLH ASEVVQMKVCM ILHWMFM
Sbjct: 290 WGKHWTRSLFGCFASACSLHFASEVVQMKVCMHILHWMFM 171
Score = 54.2 bits (112), Expect(2) = 9e-029
Identities = 21/43 (48%), Positives = 22/43 (51%)
Frame = -2 / -1
Query: 226 WPSCWPPAGCLXXXXXXXXXXXXXSWTSGRCRRPWPLNPAMEE 98
WPSCWP AG SWTS RCRRPW L P +E
Sbjct: 172 WPSCWPRAGSPCRPSASRGSSPSPSWTSERCRRPWLLIPRRDE 44
Score = 25.4 bits (49), Expect(3) = 4e-048
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +2 / +2
Query: 512 VSLLC*KPLVLCGF 553
+SLLC L+LCGF
Sbjct: 479 ISLLCYNILILCGF 520
Score = 23.1 bits (44), Expect(3) = 4e-048
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +3 / +3
Query: 492 MYCNPWLSACCA 527
+ CN LSACCA
Sbjct: 459 LLCNRPLSACCA 494
>gb|BI776312.2|BI776312 EBem04_SQ001_I10_R embryo, 12 DPA, no treatment, cv Optic, EBem04
Hordeum vulgare subsp. vulgare cDNA clone
EBem04_SQ001_I10 5', mRNA sequence
Length = 523
Score = 182 bits (392), Expect(3) = 4e-048
Identities = 73/83 (87%), Positives = 78/83 (93%)
Frame = +1 / +1
Query: 109 QDSAAMGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC 288
++S AMGGGNAQKSKMARERN EK KGGKGS+LEANKKAMNIQCKICMQTFICTTSEAKC
Sbjct: 43 EESTAMGGGNAQKSKMARERNLEKLKGGKGSRLEANKKAMNIQCKICMQTFICTTSEAKC 222
Query: 289 KEHAEARHPKNDLYQCFPHLKN* 357
KEHAEA+HPK+DL QCFPHLK *
Sbjct: 223 KEHAEAKHPKSDLVQCFPHLKQ* 291
Score = 92.3 bits (195), Expect(2) = 9e-029
Identities = 34/40 (85%), Positives = 34/40 (85%)
Frame = -1 / -3
Query: 344 WGKHW*RSFLGCLASACSLHLASEVVQMKVCMQILHWMFM 225
WGKHW RS GC ASACSLH ASEVVQMKVCM ILHWMFM
Sbjct: 278 WGKHWTRSLFGCFASACSLHFASEVVQMKVCMHILHWMFM 159
Score = 54.2 bits (112), Expect(2) = 9e-029
Identities = 21/43 (48%), Positives = 22/43 (51%)
Frame = -2 / -1
Query: 226 WPSCWPPAGCLXXXXXXXXXXXXXSWTSGRCRRPWPLNPAMEE 98
WPSCWP AG SWTS RCRRPW L P +E
Sbjct: 160 WPSCWPRAGSPCRPSASRGSSPSPSWTSERCRRPWLLIPRRDE 32
Score = 25.4 bits (49), Expect(3) = 4e-048
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +2 / +2
Query: 512 VSLLC*KPLVLCGF 553
+SLLC L+LCGF
Sbjct: 467 ISLLCYNILILCGF 508
Score = 23.1 bits (44), Expect(3) = 4e-048
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +3 / +3
Query: 492 MYCNPWLSACCA 527
+ CN LSACCA
Sbjct: 447 LLCNRPLSACCA 482
>gb|BI948827.1|BI948827 HVSMEl0010P05f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0010P05f, mRNA sequence
Length = 525
Score = 182 bits (391), Expect(3) = 4e-048
Identities = 73/83 (87%), Positives = 78/83 (93%)
Frame = +1 / +1
Query: 109 QDSAAMGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC 288
++S AMGGG+AQKSKMARERN EK KGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC
Sbjct: 25 EESTAMGGGDAQKSKMARERNLEKLKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC 204
Query: 289 KEHAEARHPKNDLYQCFPHLKN* 357
KEHAEA+HPK+DL QCFPHLK *
Sbjct: 205 KEHAEAKHPKSDLVQCFPHLKQ* 273
Score = 92.3 bits (195), Expect(2) = 4e-027
Identities = 34/40 (85%), Positives = 34/40 (85%)
Frame = -1 / -2
Query: 344 WGKHW*RSFLGCLASACSLHLASEVVQMKVCMQILHWMFM 225
WGKHW RS GC ASACSLH ASEVVQMKVCM ILHWMFM
Sbjct: 260 WGKHWTRSLFGCFASACSLHFASEVVQMKVCMHILHWMFM 141
Score = 48.7 bits (100), Expect(2) = 4e-027
Identities = 20/43 (46%), Positives = 21/43 (48%)
Frame = -2 / -3
Query: 226 WPSCWPPAGCLXXXXXXXXXXXXXSWTSGRCRRPWPLNPAMEE 98
WPSCWP AG SWTS R RRPW L P +E
Sbjct: 142 WPSCWPRAGSPCRPSASRGSSPSPSWTSERRRRPWLLIPRRDE 14
Score = 25.8 bits (50), Expect(3) = 4e-048
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +2 / +2
Query: 512 VSLLC*KPLVLCGFML 559
+SLLC L+LCGF L
Sbjct: 449 ISLLCYNILILCGFGL 496
Score = 23.1 bits (44), Expect(3) = 4e-048
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +3 / +3
Query: 492 MYCNPWLSACCA 527
+ CN LSACCA
Sbjct: 429 LLCNRPLSACCA 464
>gb|BQ463755.1|BQ463755 HG01F11r HG Hordeum vulgare subsp. vulgare cDNA clone HG01F11
5-PRIME, mRNA sequence
Length = 474
Score = 184 bits (396), Expect(3) = 7e-048
Identities = 74/83 (89%), Positives = 78/83 (93%)
Frame = +1 / +1
Query: 109 QDSAAMGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC 288
++S AMGGGNAQKSKMARERN EK KGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC
Sbjct: 10 EESTAMGGGNAQKSKMARERNLEKLKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC 189
Query: 289 KEHAEARHPKNDLYQCFPHLKN* 357
KEHAEA+HPK+DL QCFPHLK *
Sbjct: 190 KEHAEAKHPKSDLVQCFPHLKQ* 258
Score = 92.3 bits (195), Expect(2) = 4e-028
Identities = 34/40 (85%), Positives = 34/40 (85%)
Frame = -1 / -2
Query: 344 WGKHW*RSFLGCLASACSLHLASEVVQMKVCMQILHWMFM 225
WGKHW RS GC ASACSLH ASEVVQMKVCM ILHWMFM
Sbjct: 245 WGKHWTRSLFGCFASACSLHFASEVVQMKVCMHILHWMFM 126
Score = 51.9 bits (107), Expect(2) = 4e-028
Identities = 20/39 (51%), Positives = 20/39 (51%)
Frame = -2 / -3
Query: 226 WPSCWPPAGCLXXXXXXXXXXXXXSWTSGRCRRPWPLNP 110
WPSCWP AG SWTS RCRRPW L P
Sbjct: 127 WPSCWPRAGSPCRPSASRGSSPSPSWTSERCRRPWLLIP 11
Score = 23.1 bits (44), Expect(3) = 7e-048
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +3 / +3
Query: 492 MYCNPWLSACCA 527
+ CN LSACCA
Sbjct: 414 LLCNRPLSACCA 449
Score = 22.6 bits (43), Expect(3) = 7e-048
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +2 / +2
Query: 512 VSLLC*KPLVLCG 550
+SLLC L+LCG
Sbjct: 434 ISLLCYNILILCG 472
>gb|AL508029.1|AL508029 AL508029 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY07J03V 5',
mRNA sequence
Length = 514
Score = 180 bits (387), Expect(3) = 1e-047
Identities = 73/83 (87%), Positives = 77/83 (92%)
Frame = +1 / +2
Query: 109 QDSAAMGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC 288
++S AMGGGNAQKSKMARERN EK KGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC
Sbjct: 26 EESTAMGGGNAQKSKMARERNLEKLKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC 205
Query: 289 KEHAEARHPKNDLYQCFPHLKN* 357
KEHAEA+H K+DL QCFPHLK *
Sbjct: 206 KEHAEAKHXKSDLVQCFPHLKQ* 274
Score = 89.0 bits (188), Expect(2) = 2e-027
Identities = 33/40 (82%), Positives = 33/40 (82%)
Frame = -1 / -2
Query: 344 WGKHW*RSFLGCLASACSLHLASEVVQMKVCMQILHWMFM 225
WGKHW RS C ASACSLH ASEVVQMKVCM ILHWMFM
Sbjct: 261 WGKHWTRSLFXCFASACSLHFASEVVQMKVCMHILHWMFM 142
Score = 52.8 bits (109), Expect(2) = 2e-027
Identities = 21/43 (48%), Positives = 21/43 (48%)
Frame = -2 / -3
Query: 226 WPSCWPPAGCLXXXXXXXXXXXXXSWTSGRCRRPWPLNPAMEE 98
WPSCWP AG SWTS RCRRPW L P E
Sbjct: 143 WPSCWPRAGSPCRPSASRGSSPSPSWTSERCRRPWLLIPRRXE 15
Score = 25.8 bits (50), Expect(3) = 1e-047
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +2 / +3
Query: 512 VSLLC*KPLVLCGFML 559
+SLLC L+LCGF L
Sbjct: 450 ISLLCYNILILCGFGL 497
Score = 23.1 bits (44), Expect(3) = 1e-047
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +3 / +1
Query: 492 MYCNPWLSACCA 527
+ CN LSACCA
Sbjct: 430 LLCNRPLSACCA 465
>gb|BU982085.1|BU982085 HA25H17r HA Hordeum vulgare subsp. vulgare cDNA clone HA25H17
5-PRIME, mRNA sequence
Length = 487
Score = 184 bits (396), Expect(2) = 3e-047
Identities = 74/83 (89%), Positives = 78/83 (93%)
Frame = +1 / +2
Query: 109 QDSAAMGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC 288
++S AMGGGNAQKSKMARERN EK KGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC
Sbjct: 20 EESTAMGGGNAQKSKMARERNLEKLKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC 199
Query: 289 KEHAEARHPKNDLYQCFPHLKN* 357
KEHAEA+HPK+DL QCFPHLK *
Sbjct: 200 KEHAEAKHPKSDLVQCFPHLKQ* 268
Score = 92.3 bits (195), Expect(2) = 9e-029
Identities = 34/40 (85%), Positives = 34/40 (85%)
Frame = -1 / -2
Query: 344 WGKHW*RSFLGCLASACSLHLASEVVQMKVCMQILHWMFM 225
WGKHW RS GC ASACSLH ASEVVQMKVCM ILHWMFM
Sbjct: 255 WGKHWTRSLFGCFASACSLHFASEVVQMKVCMHILHWMFM 136
Score = 54.2 bits (112), Expect(2) = 9e-029
Identities = 21/43 (48%), Positives = 22/43 (51%)
Frame = -2 / -3
Query: 226 WPSCWPPAGCLXXXXXXXXXXXXXSWTSGRCRRPWPLNPAMEE 98
WPSCWP AG SWTS RCRRPW L P +E
Sbjct: 137 WPSCWPRAGSPCRPSASRGSSPSPSWTSERCRRPWLLIPRRDE 9
Score = 25.4 bits (49), Expect(2) = 3e-047
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +2 / +3
Query: 512 VSLLC*KPLVLCGF 553
+SLLC L+LCGF
Sbjct: 444 ISLLCYNILILCGF 485
>gb|CK123633.1|CK123633 BES1824104m10 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010M104 5-PRIME, mRNA sequence
Length = 497
Score = 184 bits (396), Expect(2) = 3e-047
Identities = 74/83 (89%), Positives = 78/83 (93%)
Frame = +1 / +2
Query: 109 QDSAAMGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC 288
++S AMGGGNAQKSKMARERN EK KGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC
Sbjct: 2 EESTAMGGGNAQKSKMARERNLEKLKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC 181
Query: 289 KEHAEARHPKNDLYQCFPHLKN* 357
KEHAEA+HPK+DL QCFPHLK *
Sbjct: 182 KEHAEAKHPKSDLVQCFPHLKQ* 250
Score = 92.3 bits (195), Expect(2) = 4e-028
Identities = 34/40 (85%), Positives = 34/40 (85%)
Frame = -1 / -3
Query: 344 WGKHW*RSFLGCLASACSLHLASEVVQMKVCMQILHWMFM 225
WGKHW RS GC ASACSLH ASEVVQMKVCM ILHWMFM
Sbjct: 237 WGKHWTRSLFGCFASACSLHFASEVVQMKVCMHILHWMFM 118
Score = 51.9 bits (107), Expect(2) = 4e-028
Identities = 20/39 (51%), Positives = 20/39 (51%)
Frame = -2 / -1
Query: 226 WPSCWPPAGCLXXXXXXXXXXXXXSWTSGRCRRPWPLNP 110
WPSCWP AG SWTS RCRRPW L P
Sbjct: 119 WPSCWPRAGSPCRPSASRGSSPSPSWTSERCRRPWLLIP 3
Score = 25.4 bits (49), Expect(2) = 3e-047
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +2 / +3
Query: 512 VSLLC*KPLVLCGF 553
+SLLC L+LCGF
Sbjct: 426 ISLLCYNILILCGF 467
>gb|BM099768.2|BM099768 EBes01_SQ004_D14_R embryo sac, 4-6 DPA, no treatment, cv Optic,
EBes01 Hordeum vulgare subsp. vulgare cDNA clone
EBes01_SQ004_D14 5', mRNA sequence
Length = 498
Score = 184 bits (396), Expect(2) = 3e-047
Identities = 74/83 (89%), Positives = 78/83 (93%)
Frame = +1 / +2
Query: 109 QDSAAMGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC 288
++S AMGGGNAQKSKMARERN EK KGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC
Sbjct: 26 EESTAMGGGNAQKSKMARERNLEKLKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC 205
Query: 289 KEHAEARHPKNDLYQCFPHLKN* 357
KEHAEA+HPK+DL QCFPHLK *
Sbjct: 206 KEHAEAKHPKSDLVQCFPHLKQ* 274
Score = 92.3 bits (195), Expect(2) = 9e-029
Identities = 34/40 (85%), Positives = 34/40 (85%)
Frame = -1 / -1
Query: 344 WGKHW*RSFLGCLASACSLHLASEVVQMKVCMQILHWMFM 225
WGKHW RS GC ASACSLH ASEVVQMKVCM ILHWMFM
Sbjct: 261 WGKHWTRSLFGCFASACSLHFASEVVQMKVCMHILHWMFM 142
Score = 54.2 bits (112), Expect(2) = 9e-029
Identities = 21/43 (48%), Positives = 22/43 (51%)
Frame = -2 / -2
Query: 226 WPSCWPPAGCLXXXXXXXXXXXXXSWTSGRCRRPWPLNPAMEE 98
WPSCWP AG SWTS RCRRPW L P +E
Sbjct: 143 WPSCWPRAGSPCRPSASRGSSPSPSWTSERCRRPWLLIPRRDE 15
Score = 25.4 bits (49), Expect(2) = 3e-047
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +2 / +3
Query: 512 VSLLC*KPLVLCGF 553
+SLLC L+LCGF
Sbjct: 450 ISLLCYNILILCGF 491
>gb|BU987968.1|BU987968 HF16E18r HF Hordeum vulgare subsp. vulgare cDNA clone HF16E18
5-PRIME, mRNA sequence
Length = 504
Score = 184 bits (396), Expect(2) = 3e-047
Identities = 74/83 (89%), Positives = 78/83 (93%)
Frame = +1 / +2
Query: 109 QDSAAMGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC 288
++S AMGGGNAQKSKMARERN EK KGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC
Sbjct: 29 EESTAMGGGNAQKSKMARERNLEKLKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC 208
Query: 289 KEHAEARHPKNDLYQCFPHLKN* 357
KEHAEA+HPK+DL QCFPHLK *
Sbjct: 209 KEHAEAKHPKSDLVQCFPHLKQ* 277
Score = 92.3 bits (195), Expect(2) = 9e-029
Identities = 34/40 (85%), Positives = 34/40 (85%)
Frame = -1 / -1
Query: 344 WGKHW*RSFLGCLASACSLHLASEVVQMKVCMQILHWMFM 225
WGKHW RS GC ASACSLH ASEVVQMKVCM ILHWMFM
Sbjct: 264 WGKHWTRSLFGCFASACSLHFASEVVQMKVCMHILHWMFM 145
Score = 54.2 bits (112), Expect(2) = 9e-029
Identities = 21/43 (48%), Positives = 22/43 (51%)
Frame = -2 / -2
Query: 226 WPSCWPPAGCLXXXXXXXXXXXXXSWTSGRCRRPWPLNPAMEE 98
WPSCWP AG SWTS RCRRPW L P +E
Sbjct: 146 WPSCWPRAGSPCRPSASRGSSPSPSWTSERCRRPWLLIPRRDE 18
Score = 25.4 bits (49), Expect(2) = 3e-047
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +2 / +3
Query: 512 VSLLC*KPLVLCGF 553
+SLLC L+LCGF
Sbjct: 453 ISLLCYNILILCGF 494
>gb|BG343463.2|BG343463 HVSMEg0005N08f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0005N08f, mRNA sequence
Length = 507
Score = 184 bits (396), Expect(2) = 3e-047
Identities = 74/83 (89%), Positives = 78/83 (93%)
Frame = +1 / +2
Query: 109 QDSAAMGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC 288
++S AMGGGNAQKSKMARERN EK KGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC
Sbjct: 8 EESTAMGGGNAQKSKMARERNLEKLKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC 187
Query: 289 KEHAEARHPKNDLYQCFPHLKN* 357
KEHAEA+HPK+DL QCFPHLK *
Sbjct: 188 KEHAEAKHPKSDLVQCFPHLKQ* 256
Score = 92.3 bits (195), Expect(2) = 4e-028
Identities = 34/40 (85%), Positives = 34/40 (85%)
Frame = -1 / -1
Query: 344 WGKHW*RSFLGCLASACSLHLASEVVQMKVCMQILHWMFM 225
WGKHW RS GC ASACSLH ASEVVQMKVCM ILHWMFM
Sbjct: 243 WGKHWTRSLFGCFASACSLHFASEVVQMKVCMHILHWMFM 124
Score = 51.9 bits (107), Expect(2) = 4e-028
Identities = 20/39 (51%), Positives = 20/39 (51%)
Frame = -2 / -2
Query: 226 WPSCWPPAGCLXXXXXXXXXXXXXSWTSGRCRRPWPLNP 110
WPSCWP AG SWTS RCRRPW L P
Sbjct: 125 WPSCWPRAGSPCRPSASRGSSPSPSWTSERCRRPWLLIP 9
Score = 25.4 bits (49), Expect(2) = 3e-047
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +2 / +3
Query: 512 VSLLC*KPLVLCGF 553
+SLLC L+LCGF
Sbjct: 432 ISLLCYNILILCGF 473
>gb|BJ544135.1|BJ544135 BJ544135 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak20d09 5', mRNA sequence
Length = 516
Score = 184 bits (396), Expect(2) = 3e-047
Identities = 74/83 (89%), Positives = 78/83 (93%)
Frame = +1 / +2
Query: 109 QDSAAMGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC 288
++S AMGGGNAQKSKMARERN EK KGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC
Sbjct: 35 EESTAMGGGNAQKSKMARERNLEKLKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC 214
Query: 289 KEHAEARHPKNDLYQCFPHLKN* 357
KEHAEA+HPK+DL QCFPHLK *
Sbjct: 215 KEHAEAKHPKSDLVQCFPHLKQ* 283
Score = 92.3 bits (195), Expect(2) = 9e-029
Identities = 34/40 (85%), Positives = 34/40 (85%)
Frame = -1 / -1
Query: 344 WGKHW*RSFLGCLASACSLHLASEVVQMKVCMQILHWMFM 225
WGKHW RS GC ASACSLH ASEVVQMKVCM ILHWMFM
Sbjct: 270 WGKHWTRSLFGCFASACSLHFASEVVQMKVCMHILHWMFM 151
Score = 54.2 bits (112), Expect(2) = 9e-029
Identities = 21/43 (48%), Positives = 22/43 (51%)
Frame = -2 / -2
Query: 226 WPSCWPPAGCLXXXXXXXXXXXXXSWTSGRCRRPWPLNPAMEE 98
WPSCWP AG SWTS RCRRPW L P +E
Sbjct: 152 WPSCWPRAGSPCRPSASRGSSPSPSWTSERCRRPWLLIPRRDE 24
Score = 25.4 bits (49), Expect(2) = 3e-047
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +2 / +3
Query: 512 VSLLC*KPLVLCGF 553
+SLLC L+LCGF
Sbjct: 459 ISLLCYNILILCGF 500
>gb|CK124001.1|CK124001 BES1824106h10 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010H106 5-PRIME, mRNA sequence
Length = 521
Score = 184 bits (396), Expect(2) = 3e-047
Identities = 74/83 (89%), Positives = 78/83 (93%)
Frame = +1 / +2
Query: 109 QDSAAMGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC 288
++S AMGGGNAQKSKMARERN EK KGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC
Sbjct: 32 EESTAMGGGNAQKSKMARERNLEKLKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKC 211
Query: 289 KEHAEARHPKNDLYQCFPHLKN* 357
KEHAEA+HPK+DL QCFPHLK *
Sbjct: 212 KEHAEAKHPKSDLVQCFPHLKQ* 280
Score = 92.3 bits (195), Expect(2) = 9e-029
Identities = 34/40 (85%), Positives = 34/40 (85%)
Frame = -1 / -3
Query: 344 WGKHW*RSFLGCLASACSLHLASEVVQMKVCMQILHWMFM 225
WGKHW RS GC ASACSLH ASEVVQMKVCM ILHWMFM
Sbjct: 267 WGKHWTRSLFGCFASACSLHFASEVVQMKVCMHILHWMFM 148
Score = 54.2 bits (112), Expect(2) = 9e-029
Identities = 21/43 (48%), Positives = 22/43 (51%)
Frame = -2 / -1
Query: 226 WPSCWPPAGCLXXXXXXXXXXXXXSWTSGRCRRPWPLNPAMEE 98
WPSCWP AG SWTS RCRRPW L P +E
Sbjct: 149 WPSCWPRAGSPCRPSASRGSSPSPSWTSERCRRPWLLIPRRDE 21
Score = 25.4 bits (49), Expect(2) = 3e-047
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +2 / +3
Query: 512 VSLLC*KPLVLCGF 553
+SLLC L+LCGF
Sbjct: 456 ISLLCYNILILCGF 497
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 237,198,662
Number of Sequences: 312970
Number of extensions: 3226638
Number of successful extensions: 53597
Number of sequences better than 1.0e-020: 213
length of database: 58,378,179
effective HSP length: 51
effective length of database: 42,416,709
effective search space used: 6489756477
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)