TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2763110.2.1
(541 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BF627303.3|BF627303 HVSMEb0004I01f Hordeum vulgare seedl... 194 2e-049
gb|AV917230.1|AV917230 AV917230 K. Sato unpublished cDNA li... 194 2e-049
gb|AV917809.1|AV917809 AV917809 K. Sato unpublished cDNA li... 194 2e-049
gb|AV919113.1|AV919113 AV919113 K. Sato unpublished cDNA li... 194 2e-049
gb|AV919240.1|AV919240 AV919240 K. Sato unpublished cDNA li... 194 2e-049
gb|AV919454.1|AV919454 AV919454 K. Sato unpublished cDNA li... 194 2e-049
gb|AV922397.1|AV922397 AV922397 K. Sato unpublished cDNA li... 194 2e-049
gb|AV922497.1|AV922497 AV922497 K. Sato unpublished cDNA li... 194 2e-049
gb|BJ466813.1|BJ466813 BJ466813 K. Sato unpublished cDNA li... 194 2e-049
gb|BJ466913.1|BJ466913 BJ466913 K. Sato unpublished cDNA li... 194 2e-049
gb|AV917240.1|AV917240 AV917240 K. Sato unpublished cDNA li... 189 8e-048
gb|AV922407.1|AV922407 AV922407 K. Sato unpublished cDNA li... 189 8e-048
gb|AV917724.1|AV917724 AV917724 K. Sato unpublished cDNA li... 187 4e-047
gb|BJ464883.1|BJ464883 BJ464883 K. Sato unpublished cDNA li... 184 4e-046
gb|BQ471267.1|BQ471267 HV01P03T HV Hordeum vulgare subsp. v... 184 4e-046
gb|BQ664118.1|BQ664118 HV01P03w HV Hordeum vulgare subsp. v... 177 4e-044
gb|AJ434580.1|AJ434580 AJ434580 S00002 Hordeum vulgare subs... 175 1e-043
gb|BM101180.2|BM101180 EBpi01_SQ003_C01_R pistil, 1 DPA, no... 175 1e-043
gb|AV918924.1|AV918924 AV918924 K. Sato unpublished cDNA li... 165 2e-040
gb|BJ546669.1|BJ546669 BJ546669 K. Sato unpublished cDNA li... 165 2e-040
gb|BJ465805.1|BJ465805 BJ465805 K. Sato unpublished cDNA li... 158 3e-038
gb|CB880227.1|CB880227 HM05O04w HM Hordeum vulgare subsp. v... 90 3e-037
gb|AV928038.1|AV928038 AV928038 K. Sato unpublished cDNA li... 90 3e-035
gb|BI960513.1|BI960513 HVSMEn0024N22f Hordeum vulgare rachi... 147 5e-035
gb|BF629412.3|BF629412 HVSMEb0012D18f Hordeum vulgare seedl... 147 5e-035
gb|AV931728.1|AV931728 AV931728 K. Sato unpublished cDNA li... 147 5e-035
gb|BU999462.1|BU999462 HI14J11r HI Hordeum vulgare subsp. v... 82 3e-034
gb|CA017757.1|CA017757 HV06C16r HV Hordeum vulgare subsp. v... 144 4e-034
gb|AV936726.1|AV936726 AV936726 K. Sato unpublished cDNA li... 90 5e-034
gb|AV936516.1|AV936516 AV936516 K. Sato unpublished cDNA li... 90 5e-034
gb|BJ548975.1|BJ548975 BJ548975 K. Sato unpublished cDNA li... 90 5e-034
gb|AV936356.1|AV936356 AV936356 K. Sato unpublished cDNA li... 90 5e-034
gb|BJ548006.1|BJ548006 BJ548006 K. Sato unpublished cDNA li... 90 5e-034
gb|AV936349.1|AV936349 AV936349 K. Sato unpublished cDNA li... 90 5e-034
gb|BJ547960.1|BJ547960 BJ547960 K. Sato unpublished cDNA li... 90 5e-034
gb|BJ548998.1|BJ548998 BJ548998 K. Sato unpublished cDNA li... 90 5e-034
gb|BJ548386.1|BJ548386 BJ548386 K. Sato unpublished cDNA li... 90 5e-034
gb|AV935198.1|AV935198 AV935198 K. Sato unpublished cDNA li... 90 5e-034
gb|BJ549009.1|BJ549009 BJ549009 K. Sato unpublished cDNA li... 90 5e-034
gb|AV920535.1|AV920535 AV920535 K. Sato unpublished cDNA li... 143 7e-034
gb|BQ471971.1|BQ471971 HV04A16r HV Hordeum vulgare subsp. v... 143 7e-034
gb|BJ475646.1|BJ475646 BJ475646 K. Sato unpublished cDNA li... 90 1e-032
gb|BF624213.1|BF624213 HVSMEa0012L22f Hordeum vulgare seedl... 138 2e-032
gb|AU252315.1|AU252315 AU252315 salt-stressed barley root c... 138 2e-032
gb|BJ463386.1|BJ463386 BJ463386 K. Sato unpublished cDNA li... 138 3e-032
gb|BJ466861.1|BJ466861 BJ466861 K. Sato unpublished cDNA li... 88 4e-032
gb|AV919647.1|AV919647 AV919647 K. Sato unpublished cDNA li... 88 4e-032
gb|AV913934.1|AV913934 AV913934 K. Sato unpublished cDNA li... 88 4e-032
gb|AV918301.1|AV918301 AV918301 K. Sato unpublished cDNA li... 88 4e-032
gb|AV918176.1|AV918176 AV918176 K. Sato unpublished cDNA li... 88 4e-032
gb|AV922405.1|AV922405 AV922405 K. Sato unpublished cDNA li... 88 4e-032
gb|BJ545191.1|BJ545191 BJ545191 K. Sato unpublished cDNA li... 137 4e-032
gb|BF618482.2|BF618482 HVSMEc0005N02f Hordeum vulgare seedl... 134 3e-031
gb|AV930421.1|AV930421 AV930421 K. Sato unpublished cDNA li... 90 4e-031
gb|BM816874.1|BM816874 HB105E09_SK.ab1 HB Hordeum vulgare s... 77 5e-031
gb|BF259778.3|BF259778 HVSMEf0020D20f Hordeum vulgare seedl... 133 5e-031
gb|BF631213.3|BF631213 HVSMEb0015E18f Hordeum vulgare seedl... 132 1e-030
gb|BJ546119.1|BJ546119 BJ546119 K. Sato unpublished cDNA li... 87 5e-030
gb|BJ546501.1|BJ546501 BJ546501 K. Sato unpublished cDNA li... 87 5e-030
gb|AV917596.1|AV917596 AV917596 K. Sato unpublished cDNA li... 84 6e-030
gb|AL504160.1|AL504160 AL504160 Hordeum vulgare Barke roots... 129 1e-029
gb|AV921112.1|AV921112 AV921112 K. Sato unpublished cDNA li... 80 5e-029
gb|BJ465003.1|BJ465003 BJ465003 K. Sato unpublished cDNA li... 80 5e-029
gb|AV920965.1|AV920965 AV920965 K. Sato unpublished cDNA li... 80 5e-029
gb|AV927306.1|AV927306 AV927306 K. Sato unpublished cDNA li... 80 5e-029
gb|BJ466231.1|BJ466231 BJ466231 K. Sato unpublished cDNA li... 121 1e-028
gb|AV921548.1|AV921548 AV921548 K. Sato unpublished cDNA li... 69 2e-028
gb|BQ664275.1|BQ664275 HV02K08u HV Hordeum vulgare subsp. v... 125 2e-028
gb|AV918673.1|AV918673 AV918673 K. Sato unpublished cDNA li... 78 4e-028
gb|AV913374.1|AV913374 AV913374 K. Sato unpublished cDNA li... 78 4e-028
gb|CA019349.1|CA019349 HV11L11r HV Hordeum vulgare subsp. v... 123 8e-028
gb|BE215637.1|BE215637 HV_CEb0007H18f Hordeum vulgare seedl... 122 1e-027
gb|BG415142.2|BG415142 HVSMEk0005E23f Hordeum vulgare testa... 122 2e-027
gb|BJ467028.1|BJ467028 BJ467028 K. Sato unpublished cDNA li... 121 4e-027
gb|CA009631.1|CA009631 HU14K18r HU Hordeum vulgare subsp. v... 88 1e-026
gb|BJ453643.1|BJ453643 BJ453643 K. Sato unpublished cDNA li... 80 3e-026
gb|AV916927.1|AV916927 AV916927 K. Sato unpublished cDNA li... 88 2e-025
gb|CA016903.1|CA016903 HV05M12u HV Hordeum vulgare subsp. v... 115 2e-025
gb|BJ544646.1|BJ544646 BJ544646 K. Sato unpublished cDNA li... 87 4e-025
gb|BJ452936.1|BJ452936 BJ452936 K. Sato unpublished cDNA li... 76 5e-025
gb|AV918446.1|AV918446 AV918446 K. Sato unpublished cDNA li... 80 1e-024
gb|BF631513.2|BF631513 HVSMEb0016D19f Hordeum vulgare seedl... 112 2e-024
gb|BJ545019.1|BJ545019 BJ545019 K. Sato unpublished cDNA li... 87 2e-024
gb|BF628635.2|BF628635 HVSMEb0006N15f Hordeum vulgare seedl... 79 1e-023
gb|CA015705.1|CA015705 HV12J09u HV Hordeum vulgare subsp. v... 69 2e-023
gb|BE216646.1|BE216646 HV_CEb0011B08f Hordeum vulgare seedl... 67 7e-023
gb|BF253422.2|BF253422 HVSMEf0001G02f Hordeum vulgare seedl... 102 1e-021
gb|AV916579.1|AV916579 AV916579 K. Sato unpublished cDNA li... 62 2e-021
gb|AV914567.1|AV914567 AV914567 K. Sato unpublished cDNA li... 88 3e-021
gb|BJ460252.1|BJ460252 BJ460252 K. Sato unpublished cDNA li... 84 3e-021
gb|BI960706.1|BI960706 HVSMEn0001B07f Hordeum vulgare rachi... 101 3e-021
gb|CA006248.1|CA006248 HU14K18u HU Hordeum vulgare subsp. v... 88 4e-021
gb|CA015964.1|CA015964 HV11L11u HV Hordeum vulgare subsp. v... 100 6e-021
gb|AV915997.1|AV915997 AV915997 K. Sato unpublished cDNA li... 80 8e-021
>gb|BF627303.3|BF627303 HVSMEb0004I01f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0004I01f, mRNA sequence
Length = 741
Score = 194 bits (419), Expect = 2e-049
Identities = 75/139 (53%), Positives = 92/139 (66%)
Frame = +2 / +2
Query: 8 ENFRIHPPGTLLIPRETMRSCVIGGYDVLPGTRIFVNVWAMGRDPSIWDRPEEFSPERFE 187
E FR+HPP T+L+PRETMR +GGYD+ T + VN WA+GRDP+ W PE F PERFE
Sbjct: 92 ETFRMHPPATMLVPRETMRPIRLGGYDIPANTMLMVNAWAIGRDPASWKDPEVFYPERFE 271
Query: 188 GSHVDFRGSSFELLPFGSGRRSCPAIAMGXXXXXXXXXXXXHCFDWQLPEGMVEEDIDME 367
VDF G +ELLPFG+GRR CP +AMG +CF+W LP+GM ED+ +E
Sbjct: 272 ELDVDFNGGHYELLPFGAGRRICPGLAMGVANTEFILANLLYCFNWALPQGMRSEDVGVE 451
Query: 368 ETGQLAFRKMVPLCLVPIK 424
E G L FRK PL LVP +
Sbjct: 452 EFGGLTFRKKKPLVLVPTR 508
Score = 109 bits (233), Expect = 1e-023
Identities = 52/129 (40%), Positives = 72/129 (55%)
Frame = -1 / -3
Query: 394 LPKSKLPCFFHIDVLLHHPFRELPIKAM*QVGQDKLHIGDTHGDGRA*PSS*AEREELKT 215
LP+S+ P H +L HP RE P++A+ QVGQD+L +G HG P++ AE +EL
Sbjct: 478 LPESEAPKLLHAHILAPHPLRERPVEAVEQVGQDELRVGHPHGQPWTDPAARAEGQELVV 299
Query: 214 GASKVDMTSLEPLGTELLRAIPDARIPSHCPNVHENPCAWQHVVAANDAAPHGLPWNQQG 35
A +V + LEPL E L +P R+P+ P VH + VVA PH LP ++ G
Sbjct: 298 PAVEVHIQLLEPLRVEHLGVLPRGRVPADRPRVHHQHGVGRDVVAPQPNRPHRLPRDKHG 119
Query: 34 PRWVDPEVL 8
R + PE L
Sbjct: 118 CRGMHPEGL 92
>gb|AV917230.1|AV917230 AV917230 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags18a18 5', mRNA sequence
Length = 619
Score = 194 bits (419), Expect = 2e-049
Identities = 75/139 (53%), Positives = 92/139 (66%)
Frame = +2 / +3
Query: 8 ENFRIHPPGTLLIPRETMRSCVIGGYDVLPGTRIFVNVWAMGRDPSIWDRPEEFSPERFE 187
E FR+HPP T+L+PRETMR +GGYD+ T + VN WA+GRDP+ W PE F PERFE
Sbjct: 192 ETFRMHPPATMLVPRETMRPIRLGGYDIPANTMLMVNAWAIGRDPASWKDPEVFYPERFE 371
Query: 188 GSHVDFRGSSFELLPFGSGRRSCPAIAMGXXXXXXXXXXXXHCFDWQLPEGMVEEDIDME 367
VDF G +ELLPFG+GRR CP +AMG +CF+W LP+GM ED+ +E
Sbjct: 372 ELDVDFNGGHYELLPFGAGRRICPGLAMGVANTEFILANLLYCFNWALPQGMRSEDVGVE 551
Query: 368 ETGQLAFRKMVPLCLVPIK 424
E G L FRK PL LVP +
Sbjct: 552 EFGGLTFRKKKPLVLVPTR 608
Score = 109 bits (233), Expect = 1e-023
Identities = 52/129 (40%), Positives = 72/129 (55%)
Frame = -1 / -3
Query: 394 LPKSKLPCFFHIDVLLHHPFRELPIKAM*QVGQDKLHIGDTHGDGRA*PSS*AEREELKT 215
LP+S+ P H +L HP RE P++A+ QVGQD+L +G HG P++ AE +EL
Sbjct: 578 LPESEAPKLLHAHILAPHPLRERPVEAVEQVGQDELRVGHPHGQPWTDPAARAEGQELVV 399
Query: 214 GASKVDMTSLEPLGTELLRAIPDARIPSHCPNVHENPCAWQHVVAANDAAPHGLPWNQQG 35
A +V + LEPL E L +P R+P+ P VH + VVA PH LP ++ G
Sbjct: 398 PAVEVHIQLLEPLRVEHLGVLPRGRVPADRPRVHHQHGVGRDVVAPQPNRPHRLPRDKHG 219
Query: 34 PRWVDPEVL 8
R + PE L
Sbjct: 218 CRGMHPEGL 192
>gb|AV917809.1|AV917809 AV917809 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags11k05 3', mRNA sequence
Length = 630
Score = 194 bits (419), Expect = 2e-049
Identities = 75/139 (53%), Positives = 92/139 (66%)
Frame = +2 / -1
Query: 8 ENFRIHPPGTLLIPRETMRSCVIGGYDVLPGTRIFVNVWAMGRDPSIWDRPEEFSPERFE 187
E FR+HPP T+L+PRETMR +GGYD+ T + VN WA+GRDP+ W PE F PERFE
Sbjct: 567 ETFRMHPPATMLVPRETMRPIRLGGYDIPANTMLMVNAWAIGRDPASWKDPEVFYPERFE 388
Query: 188 GSHVDFRGSSFELLPFGSGRRSCPAIAMGXXXXXXXXXXXXHCFDWQLPEGMVEEDIDME 367
VDF G +ELLPFG+GRR CP +AMG +CF+W LP+GM ED+ +E
Sbjct: 387 ELDVDFNGGHYELLPFGAGRRICPGLAMGVANTEFILANLLYCFNWALPQGMRSEDVGVE 208
Query: 368 ETGQLAFRKMVPLCLVPIK 424
E G L FRK PL LVP +
Sbjct: 207 EFGGLTFRKKKPLVLVPTR 151
Score = 109 bits (233), Expect = 1e-023
Identities = 52/129 (40%), Positives = 72/129 (55%)
Frame = -1 / +1
Query: 394 LPKSKLPCFFHIDVLLHHPFRELPIKAM*QVGQDKLHIGDTHGDGRA*PSS*AEREELKT 215
LP+S+ P H +L HP RE P++A+ QVGQD+L +G HG P++ AE +EL
Sbjct: 181 LPESEAPKLLHAHILAPHPLRERPVEAVEQVGQDELRVGHPHGQPWTDPAARAEGQELVV 360
Query: 214 GASKVDMTSLEPLGTELLRAIPDARIPSHCPNVHENPCAWQHVVAANDAAPHGLPWNQQG 35
A +V + LEPL E L +P R+P+ P VH + VVA PH LP ++ G
Sbjct: 361 PAVEVHIQLLEPLRVEHLGVLPRGRVPADRPRVHHQHGVGRDVVAPQPNRPHRLPRDKHG 540
Query: 34 PRWVDPEVL 8
R + PE L
Sbjct: 541 CRGMHPEGL 567
>gb|AV919113.1|AV919113 AV919113 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags4j07 3', mRNA sequence
Length = 646
Score = 194 bits (419), Expect = 2e-049
Identities = 75/139 (53%), Positives = 92/139 (66%)
Frame = +2 / -3
Query: 8 ENFRIHPPGTLLIPRETMRSCVIGGYDVLPGTRIFVNVWAMGRDPSIWDRPEEFSPERFE 187
E FR+HPP T+L+PRETMR +GGYD+ T + VN WA+GRDP+ W PE F PERFE
Sbjct: 566 ETFRMHPPATMLVPRETMRPIRLGGYDIPANTMLMVNAWAIGRDPASWKDPEVFYPERFE 387
Query: 188 GSHVDFRGSSFELLPFGSGRRSCPAIAMGXXXXXXXXXXXXHCFDWQLPEGMVEEDIDME 367
VDF G +ELLPFG+GRR CP +AMG +CF+W LP+GM ED+ +E
Sbjct: 386 ELDVDFNGGHYELLPFGAGRRICPGLAMGVANTEFILANLLYCFNWALPQGMRSEDVGVE 207
Query: 368 ETGQLAFRKMVPLCLVPIK 424
E G L FRK PL LVP +
Sbjct: 206 EFGGLTFRKKKPLVLVPTR 150
Score = 109 bits (233), Expect = 1e-023
Identities = 52/129 (40%), Positives = 72/129 (55%)
Frame = -1 / +3
Query: 394 LPKSKLPCFFHIDVLLHHPFRELPIKAM*QVGQDKLHIGDTHGDGRA*PSS*AEREELKT 215
LP+S+ P H +L HP RE P++A+ QVGQD+L +G HG P++ AE +EL
Sbjct: 180 LPESEAPKLLHAHILAPHPLRERPVEAVEQVGQDELRVGHPHGQPWTDPAARAEGQELVV 359
Query: 214 GASKVDMTSLEPLGTELLRAIPDARIPSHCPNVHENPCAWQHVVAANDAAPHGLPWNQQG 35
A +V + LEPL E L +P R+P+ P VH + VVA PH LP ++ G
Sbjct: 360 PAVEVHIQLLEPLRVEHLGVLPRGRVPADRPRVHHQHGVGRDVVAPQPNRPHRLPRDKHG 539
Query: 34 PRWVDPEVL 8
R + PE L
Sbjct: 540 CRGMHPEGL 566
>gb|AV919240.1|AV919240 AV919240 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags5c10 3', mRNA sequence
Length = 669
Score = 194 bits (419), Expect = 2e-049
Identities = 75/139 (53%), Positives = 92/139 (66%)
Frame = +2 / -1
Query: 8 ENFRIHPPGTLLIPRETMRSCVIGGYDVLPGTRIFVNVWAMGRDPSIWDRPEEFSPERFE 187
E FR+HPP T+L+PRETMR +GGYD+ T + VN WA+GRDP+ W PE F PERFE
Sbjct: 603 ETFRMHPPATMLVPRETMRPIRLGGYDIPANTMLMVNAWAIGRDPASWKDPEVFYPERFE 424
Query: 188 GSHVDFRGSSFELLPFGSGRRSCPAIAMGXXXXXXXXXXXXHCFDWQLPEGMVEEDIDME 367
VDF G +ELLPFG+GRR CP +AMG +CF+W LP+GM ED+ +E
Sbjct: 423 ELDVDFNGGHYELLPFGAGRRICPGLAMGVANTEFILANLLYCFNWALPQGMRSEDVGVE 244
Query: 368 ETGQLAFRKMVPLCLVPIK 424
E G L FRK PL LVP +
Sbjct: 243 EFGGLTFRKKKPLVLVPTR 187
Score = 109 bits (233), Expect = 1e-023
Identities = 52/129 (40%), Positives = 72/129 (55%)
Frame = -1 / +1
Query: 394 LPKSKLPCFFHIDVLLHHPFRELPIKAM*QVGQDKLHIGDTHGDGRA*PSS*AEREELKT 215
LP+S+ P H +L HP RE P++A+ QVGQD+L +G HG P++ AE +EL
Sbjct: 217 LPESEAPKLLHAHILAPHPLRERPVEAVEQVGQDELRVGHPHGQPWTDPAARAEGQELVV 396
Query: 214 GASKVDMTSLEPLGTELLRAIPDARIPSHCPNVHENPCAWQHVVAANDAAPHGLPWNQQG 35
A +V + LEPL E L +P R+P+ P VH + VVA PH LP ++ G
Sbjct: 397 PAVEVHIQLLEPLRVEHLGVLPRGRVPADRPRVHHQHGVGRDVVAPQPNRPHRLPRDKHG 576
Query: 34 PRWVDPEVL 8
R + PE L
Sbjct: 577 CRGMHPEGL 603
>gb|AV919454.1|AV919454 AV919454 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags6b21 3', mRNA sequence
Length = 712
Score = 194 bits (419), Expect = 2e-049
Identities = 75/139 (53%), Positives = 92/139 (66%)
Frame = +2 / -1
Query: 8 ENFRIHPPGTLLIPRETMRSCVIGGYDVLPGTRIFVNVWAMGRDPSIWDRPEEFSPERFE 187
E FR+HPP T+L+PRETMR +GGYD+ T + VN WA+GRDP+ W PE F PERFE
Sbjct: 526 ETFRMHPPATMLVPRETMRPIRLGGYDIPANTMLMVNAWAIGRDPASWKDPEVFYPERFE 347
Query: 188 GSHVDFRGSSFELLPFGSGRRSCPAIAMGXXXXXXXXXXXXHCFDWQLPEGMVEEDIDME 367
VDF G +ELLPFG+GRR CP +AMG +CF+W LP+GM ED+ +E
Sbjct: 346 ELDVDFNGGHYELLPFGAGRRICPGLAMGVANTEFILANLLYCFNWALPQGMRSEDVGVE 167
Query: 368 ETGQLAFRKMVPLCLVPIK 424
E G L FRK PL LVP +
Sbjct: 166 EFGGLTFRKKKPLVLVPTR 110
Score = 109 bits (233), Expect = 1e-023
Identities = 52/129 (40%), Positives = 72/129 (55%)
Frame = -1 / +2
Query: 394 LPKSKLPCFFHIDVLLHHPFRELPIKAM*QVGQDKLHIGDTHGDGRA*PSS*AEREELKT 215
LP+S+ P H +L HP RE P++A+ QVGQD+L +G HG P++ AE +EL
Sbjct: 140 LPESEAPKLLHAHILAPHPLRERPVEAVEQVGQDELRVGHPHGQPWTDPAARAEGQELVV 319
Query: 214 GASKVDMTSLEPLGTELLRAIPDARIPSHCPNVHENPCAWQHVVAANDAAPHGLPWNQQG 35
A +V + LEPL E L +P R+P+ P VH + VVA PH LP ++ G
Sbjct: 320 PAVEVHIQLLEPLRVEHLGVLPRGRVPADRPRVHHQHGVGRDVVAPQPNRPHRLPRDKHG 499
Query: 34 PRWVDPEVL 8
R + PE L
Sbjct: 500 CRGMHPEGL 526
>gb|AV922397.1|AV922397 AV922397 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags18a18 3', mRNA sequence
Length = 718
Score = 194 bits (419), Expect = 2e-049
Identities = 75/139 (53%), Positives = 92/139 (66%)
Frame = +2 / -2
Query: 8 ENFRIHPPGTLLIPRETMRSCVIGGYDVLPGTRIFVNVWAMGRDPSIWDRPEEFSPERFE 187
E FR+HPP T+L+PRETMR +GGYD+ T + VN WA+GRDP+ W PE F PERFE
Sbjct: 603 ETFRMHPPATMLVPRETMRPIRLGGYDIPANTMLMVNAWAIGRDPASWKDPEVFYPERFE 424
Query: 188 GSHVDFRGSSFELLPFGSGRRSCPAIAMGXXXXXXXXXXXXHCFDWQLPEGMVEEDIDME 367
VDF G +ELLPFG+GRR CP +AMG +CF+W LP+GM ED+ +E
Sbjct: 423 ELDVDFNGGHYELLPFGAGRRICPGLAMGVANTEFILANLLYCFNWALPQGMRSEDVGVE 244
Query: 368 ETGQLAFRKMVPLCLVPIK 424
E G L FRK PL LVP +
Sbjct: 243 EFGGLTFRKKKPLVLVPTR 187
Score = 109 bits (233), Expect = 1e-023
Identities = 52/129 (40%), Positives = 72/129 (55%)
Frame = -1 / +1
Query: 394 LPKSKLPCFFHIDVLLHHPFRELPIKAM*QVGQDKLHIGDTHGDGRA*PSS*AEREELKT 215
LP+S+ P H +L HP RE P++A+ QVGQD+L +G HG P++ AE +EL
Sbjct: 217 LPESEAPKLLHAHILAPHPLRERPVEAVEQVGQDELRVGHPHGQPWTDPAARAEGQELVV 396
Query: 214 GASKVDMTSLEPLGTELLRAIPDARIPSHCPNVHENPCAWQHVVAANDAAPHGLPWNQQG 35
A +V + LEPL E L +P R+P+ P VH + VVA PH LP ++ G
Sbjct: 397 PAVEVHIQLLEPLRVEHLGVLPRGRVPADRPRVHHQHGVGRDVVAPQPNRPHRLPRDKHG 576
Query: 34 PRWVDPEVL 8
R + PE L
Sbjct: 577 CRGMHPEGL 603
>gb|AV922497.1|AV922497 AV922497 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags18g21 3', mRNA sequence
Length = 670
Score = 194 bits (419), Expect = 2e-049
Identities = 75/139 (53%), Positives = 92/139 (66%)
Frame = +2 / -1
Query: 8 ENFRIHPPGTLLIPRETMRSCVIGGYDVLPGTRIFVNVWAMGRDPSIWDRPEEFSPERFE 187
E FR+HPP T+L+PRETMR +GGYD+ T + VN WA+GRDP+ W PE F PERFE
Sbjct: 604 ETFRMHPPATMLVPRETMRPIRLGGYDIPANTMLMVNAWAIGRDPASWKDPEVFYPERFE 425
Query: 188 GSHVDFRGSSFELLPFGSGRRSCPAIAMGXXXXXXXXXXXXHCFDWQLPEGMVEEDIDME 367
VDF G +ELLPFG+GRR CP +AMG +CF+W LP+GM ED+ +E
Sbjct: 424 ELDVDFNGGHYELLPFGAGRRICPGLAMGVANTEFILANLLYCFNWALPQGMRSEDVGVE 245
Query: 368 ETGQLAFRKMVPLCLVPIK 424
E G L FRK PL LVP +
Sbjct: 244 EFGGLTFRKKKPLVLVPTR 188
Score = 109 bits (233), Expect = 1e-023
Identities = 52/129 (40%), Positives = 72/129 (55%)
Frame = -1 / +2
Query: 394 LPKSKLPCFFHIDVLLHHPFRELPIKAM*QVGQDKLHIGDTHGDGRA*PSS*AEREELKT 215
LP+S+ P H +L HP RE P++A+ QVGQD+L +G HG P++ AE +EL
Sbjct: 218 LPESEAPKLLHAHILAPHPLRERPVEAVEQVGQDELRVGHPHGQPWTDPAARAEGQELVV 397
Query: 214 GASKVDMTSLEPLGTELLRAIPDARIPSHCPNVHENPCAWQHVVAANDAAPHGLPWNQQG 35
A +V + LEPL E L +P R+P+ P VH + VVA PH LP ++ G
Sbjct: 398 PAVEVHIQLLEPLRVEHLGVLPRGRVPADRPRVHHQHGVGRDVVAPQPNRPHRLPRDKHG 577
Query: 34 PRWVDPEVL 8
R + PE L
Sbjct: 578 CRGMHPEGL 604
>gb|BJ466813.1|BJ466813 BJ466813 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags34b17 3', mRNA sequence
Length = 729
Score = 194 bits (419), Expect = 2e-049
Identities = 75/139 (53%), Positives = 92/139 (66%)
Frame = +2 / -1
Query: 8 ENFRIHPPGTLLIPRETMRSCVIGGYDVLPGTRIFVNVWAMGRDPSIWDRPEEFSPERFE 187
E FR+HPP T+L+PRETMR +GGYD+ T + VN WA+GRDP+ W PE F PERFE
Sbjct: 555 ETFRMHPPATMLVPRETMRPIRLGGYDIPANTMLMVNAWAIGRDPASWKDPEVFYPERFE 376
Query: 188 GSHVDFRGSSFELLPFGSGRRSCPAIAMGXXXXXXXXXXXXHCFDWQLPEGMVEEDIDME 367
VDF G +ELLPFG+GRR CP +AMG +CF+W LP+GM ED+ +E
Sbjct: 375 ELDVDFNGGHYELLPFGAGRRICPGLAMGVANTEFILANLLYCFNWALPQGMRSEDVGVE 196
Query: 368 ETGQLAFRKMVPLCLVPIK 424
E G L FRK PL LVP +
Sbjct: 195 EFGGLTFRKKKPLVLVPTR 139
Score = 109 bits (233), Expect = 1e-023
Identities = 52/129 (40%), Positives = 72/129 (55%)
Frame = -1 / +1
Query: 394 LPKSKLPCFFHIDVLLHHPFRELPIKAM*QVGQDKLHIGDTHGDGRA*PSS*AEREELKT 215
LP+S+ P H +L HP RE P++A+ QVGQD+L +G HG P++ AE +EL
Sbjct: 169 LPESEAPKLLHAHILAPHPLRERPVEAVEQVGQDELRVGHPHGQPWTDPAARAEGQELVV 348
Query: 214 GASKVDMTSLEPLGTELLRAIPDARIPSHCPNVHENPCAWQHVVAANDAAPHGLPWNQQG 35
A +V + LEPL E L +P R+P+ P VH + VVA PH LP ++ G
Sbjct: 349 PAVEVHIQLLEPLRVEHLGVLPRGRVPADRPRVHHQHGVGRDVVAPQPNRPHRLPRDKHG 528
Query: 34 PRWVDPEVL 8
R + PE L
Sbjct: 529 CRGMHPEGL 555
>gb|BJ466913.1|BJ466913 BJ466913 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags35a04 3', mRNA sequence
Length = 719
Score = 194 bits (419), Expect = 2e-049
Identities = 75/139 (53%), Positives = 92/139 (66%)
Frame = +2 / -2
Query: 8 ENFRIHPPGTLLIPRETMRSCVIGGYDVLPGTRIFVNVWAMGRDPSIWDRPEEFSPERFE 187
E FR+HPP T+L+PRETMR +GGYD+ T + VN WA+GRDP+ W PE F PERFE
Sbjct: 604 ETFRMHPPATMLVPRETMRPIRLGGYDIPANTMLMVNAWAIGRDPASWKDPEVFYPERFE 425
Query: 188 GSHVDFRGSSFELLPFGSGRRSCPAIAMGXXXXXXXXXXXXHCFDWQLPEGMVEEDIDME 367
VDF G +ELLPFG+GRR CP +AMG +CF+W LP+GM ED+ +E
Sbjct: 424 ELDVDFNGGHYELLPFGAGRRICPGLAMGVANTEFILANLLYCFNWALPQGMRSEDVGVE 245
Query: 368 ETGQLAFRKMVPLCLVPIK 424
E G L FRK PL LVP +
Sbjct: 244 EFGGLTFRKKKPLVLVPTR 188
Score = 109 bits (233), Expect = 1e-023
Identities = 52/129 (40%), Positives = 72/129 (55%)
Frame = -1 / +2
Query: 394 LPKSKLPCFFHIDVLLHHPFRELPIKAM*QVGQDKLHIGDTHGDGRA*PSS*AEREELKT 215
LP+S+ P H +L HP RE P++A+ QVGQD+L +G HG P++ AE +EL
Sbjct: 218 LPESEAPKLLHAHILAPHPLRERPVEAVEQVGQDELRVGHPHGQPWTDPAARAEGQELVV 397
Query: 214 GASKVDMTSLEPLGTELLRAIPDARIPSHCPNVHENPCAWQHVVAANDAAPHGLPWNQQG 35
A +V + LEPL E L +P R+P+ P VH + VVA PH LP ++ G
Sbjct: 398 PAVEVHIQLLEPLRVEHLGVLPRGRVPADRPRVHHQHGVGRDVVAPQPNRPHRLPRDKHG 577
Query: 34 PRWVDPEVL 8
R + PE L
Sbjct: 578 CRGMHPEGL 604
>gb|AV917240.1|AV917240 AV917240 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags18b11 5', mRNA sequence
Length = 586
Score = 189 bits (408), Expect = 8e-048
Identities = 73/136 (53%), Positives = 90/136 (66%)
Frame = +2 / +3
Query: 17 RIHPPGTLLIPRETMRSCVIGGYDVLPGTRIFVNVWAMGRDPSIWDRPEEFSPERFEGSH 196
R+HPP T+L+PRETMR +GGYD+ T + VN WA+GRDP+ W PE F PERFE
Sbjct: 3 RMHPPATMLVPRETMRPIRLGGYDIPANTMLMVNAWAIGRDPASWKDPEVFYPERFEELD 182
Query: 197 VDFRGSSFELLPFGSGRRSCPAIAMGXXXXXXXXXXXXHCFDWQLPEGMVEEDIDMEETG 376
VDF G +ELLPFG+GRR CP +AMG +CF+W LP+GM ED+ +EE G
Sbjct: 183 VDFNGGHYELLPFGAGRRICPGLAMGVANTEFILANLLYCFNWALPQGMRSEDVGVEEFG 362
Query: 377 QLAFRKMVPLCLVPIK 424
L FRK PL LVP +
Sbjct: 363 GLTFRKKKPLVLVPTR 410
Score = 106 bits (227), Expect = 7e-023
Identities = 50/126 (39%), Positives = 70/126 (55%)
Frame = -1 / -3
Query: 394 LPKSKLPCFFHIDVLLHHPFRELPIKAM*QVGQDKLHIGDTHGDGRA*PSS*AEREELKT 215
LP+S+ P H +L HP RE P++A+ QVGQD+L +G HG P++ AE +EL
Sbjct: 380 LPESEAPKLLHAHILAPHPLRERPVEAVEQVGQDELRVGHPHGQPWTDPAARAEGQELVV 201
Query: 214 GASKVDMTSLEPLGTELLRAIPDARIPSHCPNVHENPCAWQHVVAANDAAPHGLPWNQQG 35
A +V + LEPL E L +P R+P+ P VH + VVA PH LP ++ G
Sbjct: 200 PAVEVHIQLLEPLRVEHLGVLPRGRVPADRPRVHHQHGVGRDVVAPQPNRPHRLPRDKHG 21
Query: 34 PRWVDP 17
R + P
Sbjct: 20 CRGMHP 3
>gb|AV922407.1|AV922407 AV922407 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags18b11 3', mRNA sequence
Length = 560
Score = 189 bits (408), Expect = 8e-048
Identities = 73/136 (53%), Positives = 90/136 (66%)
Frame = +2 / -3
Query: 17 RIHPPGTLLIPRETMRSCVIGGYDVLPGTRIFVNVWAMGRDPSIWDRPEEFSPERFEGSH 196
R+HPP T+L+PRETMR +GGYD+ T + VN WA+GRDP+ W PE F PERFE
Sbjct: 558 RMHPPATMLVPRETMRPIRLGGYDIPANTMLMVNAWAIGRDPASWKDPEVFYPERFEELD 379
Query: 197 VDFRGSSFELLPFGSGRRSCPAIAMGXXXXXXXXXXXXHCFDWQLPEGMVEEDIDMEETG 376
VDF G +ELLPFG+GRR CP +AMG +CF+W LP+GM ED+ +EE G
Sbjct: 378 VDFNGGHYELLPFGAGRRICPGLAMGVANTEFILANLLYCFNWALPQGMRSEDVGVEEFG 199
Query: 377 QLAFRKMVPLCLVPIK 424
L FRK PL LVP +
Sbjct: 198 GLTFRKKKPLVLVPTR 151
Score = 106 bits (227), Expect = 7e-023
Identities = 50/126 (39%), Positives = 70/126 (55%)
Frame = -1 / +1
Query: 394 LPKSKLPCFFHIDVLLHHPFRELPIKAM*QVGQDKLHIGDTHGDGRA*PSS*AEREELKT 215
LP+S+ P H +L HP RE P++A+ QVGQD+L +G HG P++ AE +EL
Sbjct: 181 LPESEAPKLLHAHILAPHPLRERPVEAVEQVGQDELRVGHPHGQPWTDPAARAEGQELVV 360
Query: 214 GASKVDMTSLEPLGTELLRAIPDARIPSHCPNVHENPCAWQHVVAANDAAPHGLPWNQQG 35
A +V + LEPL E L +P R+P+ P VH + VVA PH LP ++ G
Sbjct: 361 PAVEVHIQLLEPLRVEHLGVLPRGRVPADRPRVHHQHGVGRDVVAPQPNRPHRLPRDKHG 540
Query: 34 PRWVDP 17
R + P
Sbjct: 541 CRGMHP 558
>gb|AV917724.1|AV917724 AV917724 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags11c24 3', mRNA sequence
Length = 578
Score = 187 bits (403), Expect = 4e-047
Identities = 72/135 (53%), Positives = 89/135 (65%)
Frame = +2 / -2
Query: 20 IHPPGTLLIPRETMRSCVIGGYDVLPGTRIFVNVWAMGRDPSIWDRPEEFSPERFEGSHV 199
+HPP T+L+PRETMR +GGYD+ T + VN WA+GRDP+ W PE F PERFE V
Sbjct: 577 MHPPATMLVPRETMRPIRLGGYDIPANTMLMVNAWAIGRDPASWKDPEVFYPERFEELDV 398
Query: 200 DFRGSSFELLPFGSGRRSCPAIAMGXXXXXXXXXXXXHCFDWQLPEGMVEEDIDMEETGQ 379
DF G +ELLPFG+GRR CP +AMG +CF+W LP+GM ED+ +EE G
Sbjct: 397 DFNGGHYELLPFGAGRRICPGLAMGVANTEFILANLLYCFNWALPQGMRSEDVGVEEFGG 218
Query: 380 LAFRKMVPLCLVPIK 424
L FRK PL LVP +
Sbjct: 217 LTFRKKKPLVLVPTR 173
Score = 104 bits (222), Expect = 4e-022
Identities = 49/122 (40%), Positives = 68/122 (55%)
Frame = -1 / +2
Query: 394 LPKSKLPCFFHIDVLLHHPFRELPIKAM*QVGQDKLHIGDTHGDGRA*PSS*AEREELKT 215
LP+S+ P H +L HP RE P++A+ QVGQD+L +G HG P++ AE +EL
Sbjct: 203 LPESEAPKLLHAHILAPHPLRERPVEAVEQVGQDELRVGHPHGQPWTDPAARAEGQELVV 382
Query: 214 GASKVDMTSLEPLGTELLRAIPDARIPSHCPNVHENPCAWQHVVAANDAAPHGLPWNQQG 35
A +V + LEPL E L +P R+P+ P VH + VVA PH LP ++ G
Sbjct: 383 PAVEVHIQLLEPLRVEHLGVLPRGRVPADRPRVHHQHGVGRDVVAPQPNRPHRLPRDKHG 562
Query: 34 PR 29
R
Sbjct: 563 CR 568
>gb|BJ464883.1|BJ464883 BJ464883 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags36h03 5', mRNA sequence
Length = 582
Score = 184 bits (396), Expect = 4e-046
Identities = 70/129 (54%), Positives = 86/129 (66%)
Frame = +2 / +3
Query: 8 ENFRIHPPGTLLIPRETMRSCVIGGYDVLPGTRIFVNVWAMGRDPSIWDRPEEFSPERFE 187
E FR+HPP T+L+PRETMR +GGYD+ T + VN WA+GRDP+ W PE F PERFE
Sbjct: 192 ETFRMHPPATMLVPRETMRPIRLGGYDIPANTMLMVNAWAIGRDPASWKDPEVFYPERFE 371
Query: 188 GSHVDFRGSSFELLPFGSGRRSCPAIAMGXXXXXXXXXXXXHCFDWQLPEGMVEEDIDME 367
VDF G +ELLPFG+GRR CP +AMG +CF+W LP+GM ED+ +E
Sbjct: 372 ELDVDFNGGHYELLPFGAGRRICPGLAMGVANTEFILANLLYCFNWALPQGMRSEDVGVE 551
Query: 368 ETGQLAFRK 394
E G L FRK
Sbjct: 552 EFGGLTFRK 578
Score = 109 bits (233), Expect = 1e-023
Identities = 52/129 (40%), Positives = 72/129 (55%)
Frame = -1 / -2
Query: 394 LPKSKLPCFFHIDVLLHHPFRELPIKAM*QVGQDKLHIGDTHGDGRA*PSS*AEREELKT 215
LP+S+ P H +L HP RE P++A+ QVGQD+L +G HG P++ AE +EL
Sbjct: 578 LPESEAPKLLHAHILAPHPLRERPVEAVEQVGQDELRVGHPHGQPWTDPAARAEGQELVV 399
Query: 214 GASKVDMTSLEPLGTELLRAIPDARIPSHCPNVHENPCAWQHVVAANDAAPHGLPWNQQG 35
A +V + LEPL E L +P R+P+ P VH + VVA PH LP ++ G
Sbjct: 398 PAVEVHIQLLEPLRVEHLGVLPRGRVPADRPRVHHQHGVGRDVVAPQPNRPHRLPRDKHG 219
Query: 34 PRWVDPEVL 8
R + PE L
Sbjct: 218 CRGMHPEGL 192
>gb|BQ471267.1|BQ471267 HV01P03T HV Hordeum vulgare subsp. vulgare cDNA clone HV01P03
5-PRIME, mRNA sequence
Length = 610
Score = 184 bits (396), Expect = 4e-046
Identities = 70/129 (54%), Positives = 86/129 (66%)
Frame = +2 / +2
Query: 8 ENFRIHPPGTLLIPRETMRSCVIGGYDVLPGTRIFVNVWAMGRDPSIWDRPEEFSPERFE 187
E FR+HPP T+L+PRETMR +GGYD+ T + VN WA+GRDP+ W PE F PERFE
Sbjct: 221 ETFRMHPPATMLVPRETMRPIRLGGYDIPANTMLMVNAWAIGRDPASWKDPEVFYPERFE 400
Query: 188 GSHVDFRGSSFELLPFGSGRRSCPAIAMGXXXXXXXXXXXXHCFDWQLPEGMVEEDIDME 367
VDF G +ELLPFG+GRR CP +AMG +CF+W LP+GM ED+ +E
Sbjct: 401 ELDVDFNGGHYELLPFGAGRRICPGLAMGVANTEFILANLLYCFNWALPQGMRSEDVGVE 580
Query: 368 ETGQLAFRK 394
E G L FRK
Sbjct: 581 EFGGLTFRK 607
Score = 109 bits (233), Expect = 1e-023
Identities = 52/129 (40%), Positives = 72/129 (55%)
Frame = -1 / -1
Query: 394 LPKSKLPCFFHIDVLLHHPFRELPIKAM*QVGQDKLHIGDTHGDGRA*PSS*AEREELKT 215
LP+S+ P H +L HP RE P++A+ QVGQD+L +G HG P++ AE +EL
Sbjct: 607 LPESEAPKLLHAHILAPHPLRERPVEAVEQVGQDELRVGHPHGQPWTDPAARAEGQELVV 428
Query: 214 GASKVDMTSLEPLGTELLRAIPDARIPSHCPNVHENPCAWQHVVAANDAAPHGLPWNQQG 35
A +V + LEPL E L +P R+P+ P VH + VVA PH LP ++ G
Sbjct: 427 PAVEVHIQLLEPLRVEHLGVLPRGRVPADRPRVHHQHGVGRDVVAPQPNRPHRLPRDKHG 248
Query: 34 PRWVDPEVL 8
R + PE L
Sbjct: 247 CRGMHPEGL 221
>gb|BQ664118.1|BQ664118 HV01P03w HV Hordeum vulgare subsp. vulgare cDNA clone HV01P03
3-PRIME, mRNA sequence
Length = 591
Score = 177 bits (381), Expect = 4e-044
Identities = 69/130 (53%), Positives = 85/130 (65%)
Frame = +2 / -2
Query: 35 TLLIPRETMRSCVIGGYDVLPGTRIFVNVWAMGRDPSIWDRPEEFSPERFEGSHVDFRGS 214
T+L+PRETMR +GGYD+ T + VN WA+GRDP+ W PE F PERFE VDF G
Sbjct: 587 TMLVPRETMRPIRLGGYDIXANTMLVVNAWAIGRDPASWKDPEVFYPERFEELDVDFNGG 408
Query: 215 SFELLPFGSGRRSCPAIAMGXXXXXXXXXXXXHCFDWQLPEGMVEEDIDMEETGQLAFRK 394
+ELLPFG+GRR CP +AMG +CF+W LP+GM ED+ +EE G L FRK
Sbjct: 407 HYELLPFGAGRRICPGLAMGVANTEFILANLLYCFNWALPQGMRSEDVGVEEFGGLTFRK 228
Query: 395 MVPLCLVPIK 424
PL LVP +
Sbjct: 227 KKPLVLVPTR 198
Score = 103 bits (220), Expect = 7e-022
Identities = 48/120 (40%), Positives = 67/120 (55%)
Frame = -1 / +3
Query: 394 LPKSKLPCFFHIDVLLHHPFRELPIKAM*QVGQDKLHIGDTHGDGRA*PSS*AEREELKT 215
LP+S+ P H +L HP RE P++A+ QVGQD+L +G HG P++ AE +EL
Sbjct: 228 LPESEAPKLLHAHILAPHPLRERPVEAVEQVGQDELRVGHPHGQPWTDPAARAEGQELVV 407
Query: 214 GASKVDMTSLEPLGTELLRAIPDARIPSHCPNVHENPCAWQHVVAANDAAPHGLPWNQQG 35
A +V + LEPL E L +P R+P+ P VH + VVA PH LP ++ G
Sbjct: 408 PAVEVHIQLLEPLRVEHLGVLPRGRVPADRPRVHHQHGVGRDVVAPQPNRPHRLPRDKHG 587
>gb|AJ434580.1|AJ434580 AJ434580 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200005G01F1, mRNA sequence
Length = 486
Score = 175 bits (377), Expect = 1e-043
Identities = 67/137 (48%), Positives = 87/137 (63%)
Frame = +2 / +3
Query: 5 QENFRIHPPGTLLIPRETMRSCVIGGYDVLPGTRIFVNVWAMGRDPSIWDRPEEFSPERF 184
+E FR+HPP LL+PR+ + I GY + G+R+FVNVWA+GRD +WD PE+F PERF
Sbjct: 24 KETFRLHPPAPLLLPRQPEATLKIAGYTIPKGSRVFVNVWAIGRDKDVWDEPEKFMPERF 203
Query: 185 EGSHVDFRGSSFELLPFGSGRRSCPAIAMGXXXXXXXXXXXXHCFDWQLPEGMVEEDIDM 364
GS +DFRG FELLPFG+GRR CP + + H F W LP + + IDM
Sbjct: 204 LGSTIDFRGVDFELLPFGAGRRICPGMTLAARMVHLMLASLLHQFKWSLPVELERDGIDM 383
Query: 365 EETGQLAFRKMVPLCLV 415
E+ L K+VPLC+V
Sbjct: 384 EDKFGLTLTKVVPLCIV 434
>gb|BM101180.2|BM101180 EBpi01_SQ003_C01_R pistil, 1 DPA, no treatment, cv Optic, EBpi01
Hordeum vulgare subsp. vulgare cDNA clone
EBpi01_SQ003_C01 5', mRNA sequence
Length = 537
Score = 175 bits (377), Expect = 1e-043
Identities = 69/134 (51%), Positives = 85/134 (63%)
Frame = +2 / -3
Query: 23 HPPGTLLIPRETMRSCVIGGYDVLPGTRIFVNVWAMGRDPSIWDRPEEFSPERFEGSHVD 202
HPP T+L+PRETMR +GG + + VN WA+GRDP+ W PE F PERFE VD
Sbjct: 535 HPPATMLVPRETMRPIRLGGTXIPGQHHVVVNAWAIGRDPASWKDPEVFYPERFEELDVD 356
Query: 203 FRGSSFELLPFGSGRRSCPAIAMGXXXXXXXXXXXXHCFDWQLPEGMVEEDIDMEETGQL 382
F G +ELLPFG+GRR CP +AMG +CF+W LP+GM ED+ +EE G L
Sbjct: 355 FNGGHYELLPFGAGRRICPGLAMGVANTEFILANLLYCFNWALPQGMRSEDVGVEEFGGL 176
Query: 383 AFRKMVPLCLVPIK 424
FRK PL LVP +
Sbjct: 175 TFRKKKPLVLVPTR 134
Score = 100 bits (214), Expect = 4e-021
Identities = 48/122 (39%), Positives = 66/122 (54%)
Frame = -1 / +2
Query: 394 LPKSKLPCFFHIDVLLHHPFRELPIKAM*QVGQDKLHIGDTHGDGRA*PSS*AEREELKT 215
LP+S+ P H +L HP RE P++A+ QVGQD+L +G HG P++ AE +EL
Sbjct: 164 LPESEAPKLLHAHILAPHPLRERPVEAVEQVGQDELRVGHPHGQPWTDPAARAEGQELVV 343
Query: 214 GASKVDMTSLEPLGTELLRAIPDARIPSHCPNVHENPCAWQHVVAANDAAPHGLPWNQQG 35
A +V + LEPL E L +P R+P+ P VH N V PH LP ++ G
Sbjct: 344 PAVEVHIQLLEPLRVEHLGVLPRGRVPADRPRVHHNMVLAGDVRTPQPNRPHRLPRDKHG 523
Query: 34 PR 29
R
Sbjct: 524 CR 529
>gb|AV918924.1|AV918924 AV918924 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags22l15 3', mRNA sequence
Length = 566
Score = 165 bits (354), Expect = 2e-040
Identities = 65/124 (52%), Positives = 79/124 (63%)
Frame = +2 / -1
Query: 53 ETMRSCVIGGYDVLPGTRIFVNVWAMGRDPSIWDRPEEFSPERFEGSHVDFRGSSFELLP 232
ETMR +GGYD+ T + VN WA+GRDP+ W PE F PERFE VDF G +ELLP
Sbjct: 566 ETMRPIRLGGYDIPANTMLMVNAWAIGRDPASWKDPEVFYPERFEELDVDFNGGHYELLP 387
Query: 233 FGSGRRSCPAIAMGXXXXXXXXXXXXHCFDWQLPEGMVEEDIDMEETGQLAFRKMVPLCL 412
FG+GRR CP +AMG +CF+W LP+GM ED+ +EE G L FRK PL L
Sbjct: 386 FGAGRRICPGLAMGVANTEFILANLLYCFNWALPQGMRSEDVGVEEFGGLTFRKKKPLVL 207
Query: 413 VPIK 424
VP +
Sbjct: 206 VPTR 195
>gb|BJ546669.1|BJ546669 BJ546669 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak45m01 3', mRNA sequence
Length = 730
Score = 165 bits (354), Expect = 2e-040
Identities = 65/148 (43%), Positives = 86/148 (58%)
Frame = +2 / -2
Query: 5 QENFRIHPPGTLLIPRETMRSCVIGGYDVLPGTRIFVNVWAMGRDPSIWDRPEEFSPERF 184
+E R+HP LL+PRE M +C I GYD+ GT + VN WA+GRDP W PEEF PERF
Sbjct: 615 KETMRLHPAAPLLLPREAMEACKILGYDIPEGTTVLVNAWAIGRDPKYWQDPEEFKPERF 436
Query: 185 EGSHVDFRGSSFELLPFGSGRRSCPAIAMGXXXXXXXXXXXXHCFDWQLPEGMVEEDIDM 364
E VDF+G++FE +PFG+GRR CP + + FDW+LP G+ + +DM
Sbjct: 435 ESGMVDFKGTNFEYIPFGAGRRMCPGMTFAQASMEIVLASLLYHFDWELPSGVKPDGLDM 256
Query: 365 EETGQLAFRKMVPLCLVPIKRV*MYNCT 448
E L R+ L L + V + CT
Sbjct: 255 TEEMGLTVRRKNDLYLHAMVHVPLI*CT 172
>gb|BJ465805.1|BJ465805 BJ465805 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags27g14 3', mRNA sequence
Length = 511
Score = 158 bits (339), Expect = 3e-038
Identities = 61/117 (52%), Positives = 75/117 (64%)
Frame = +2 / -1
Query: 74 IGGYDVLPGTRIFVNVWAMGRDPSIWDRPEEFSPERFEGSHVDFRGSSFELLPFGSGRRS 253
+GGYD+ T + VN WA+GRDP+ W PE F PERFE VDF G +ELLPFG+GRR
Sbjct: 502 LGGYDIPANTMLMVNAWAIGRDPASWKDPEVFYPERFEELDVDFNGGHYELLPFGAGRRI 323
Query: 254 CPAIAMGXXXXXXXXXXXXHCFDWQLPEGMVEEDIDMEETGQLAFRKMVPLCLVPIK 424
CP +AMG +CF+W LP+GM ED+ +EE G L FRK PL LVP +
Sbjct: 322 CPGLAMGVANTEFILANLLYCFNWALPQGMRSEDVGVEEFGGLTFRKKKPLVLVPTR 152
>gb|CB880227.1|CB880227 HM05O04w HM Hordeum vulgare subsp. vulgare cDNA clone HM05O04
3-PRIME, mRNA sequence
Length = 604
Score = 90.0 bits (190), Expect(3) = 3e-037
Identities = 34/65 (52%), Positives = 42/65 (64%)
Frame = +2 / -2
Query: 152 DRPEEFSPERFEGSHVDFRGSSFELLPFGSGRRSCPAIAMGXXXXXXXXXXXXHCFDWQL 331
D PEEF P+RFE S +DF+G+ FEL PFG+GRR CPA++M + F W L
Sbjct: 399 DDPEEFKPDRFEMSKIDFKGTHFELTPFGAGRRICPALSMSTATVEFTLANLLYRFQWTL 220
Query: 332 PEGMV 346
PEGMV
Sbjct: 219 PEGMV 205
Score = 80.8 bits (170), Expect(3) = 3e-037
Identities = 29/49 (59%), Positives = 36/49 (73%)
Frame = +2 / -2
Query: 5 QENFRIHPPGTLLIPRETMRSCVIGGYDVLPGTRIFVNVWAMGRDPSIW 151
+E R+HPP +L+PRE MR IGGYDV TRI+VN WA+GRDP+ W
Sbjct: 549 KETLRLHPPAPMLLPREAMRDIQIGGYDVPAKTRIYVNAWAIGRDPTSW 403
Score = 22.1 bits (42), Expect(3) = 3e-037
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +2 / -2
Query: 356 IDMEETGQLAFRKMVPLCLVP 418
+ MEE G+L PL LVP
Sbjct: 204 VSMEEEGKLVPLLKEPLLLVP 142
>gb|AV928038.1|AV928038 AV928038 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd13l05 3', mRNA sequence
Length = 622
Score = 90.0 bits (190), Expect(3) = 3e-035
Identities = 34/65 (52%), Positives = 42/65 (64%)
Frame = +2 / -2
Query: 152 DRPEEFSPERFEGSHVDFRGSSFELLPFGSGRRSCPAIAMGXXXXXXXXXXXXHCFDWQL 331
D PEEF P+RFE S +DF+G+ FEL PFG+GRR CPA++M + F W L
Sbjct: 459 DDPEEFKPDRFEMSKIDFKGTHFELTPFGAGRRICPALSMSTATVEFTLANLLYRFQWTL 280
Query: 332 PEGMV 346
PEGMV
Sbjct: 279 PEGMV 265
Score = 73.9 bits (155), Expect(3) = 3e-035
Identities = 26/49 (53%), Positives = 35/49 (71%)
Frame = +2 / -2
Query: 5 QENFRIHPPGTLLIPRETMRSCVIGGYDVLPGTRIFVNVWAMGRDPSIW 151
+ ++ +HPP +L+PRE MR IGGY V TRI+VN WA+GRDP+ W
Sbjct: 609 RRHYGLHPPAPMLLPREAMRDIQIGGYHVPAKTRIYVNAWAIGRDPTSW 463
Score = 22.1 bits (42), Expect(3) = 3e-035
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +2 / -2
Query: 356 IDMEETGQLAFRKMVPLCLVP 418
+ MEE G+L PL LVP
Sbjct: 264 VSMEEEGKLVPLLKKPLLLVP 202
>gb|BI960513.1|BI960513 HVSMEn0024N22f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0024N22f, mRNA sequence
Length = 653
Score = 147 bits (315), Expect = 5e-035
Identities = 58/142 (40%), Positives = 78/142 (54%)
Frame = +2 / +2
Query: 5 QENFRIHPPGTLLIPRETMRSCVIGGYDVLPGTRIFVNVWAMGRDPSIWDRPEEFSPERF 184
+E+ R+HPP L++P + S +GGY++ G + VNVWA+ RDP +W P EF PERF
Sbjct: 116 KESLRLHPPTPLMLPHKASASVKVGGYNIPKGANVMVNVWAVARDPKVWSSPLEFRPERF 295
Query: 185 EGSHVDFRGSSFELLPFGSGRRSCPAIAMGXXXXXXXXXXXXHCFDWQLPEGMVEEDIDM 364
+D +GS F +LPFG+GRR CP +G H F W LPEG EDI M
Sbjct: 296 LEESIDIKGSDFRVLPFGAGRRVCPGAQLGINLVASMIGHMLHHFKWSLPEGTRPEDISM 475
Query: 365 EETGQLAFRKMVPLCLVPIKRV 430
E+ L PL + R+
Sbjct: 476 MESPGLVTFMGTPLQAIATPRL 541
>gb|BF629412.3|BF629412 HVSMEb0012D18f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0012D18f, mRNA sequence
Length = 846
Score = 147 bits (315), Expect = 5e-035
Identities = 57/111 (51%), Positives = 70/111 (63%)
Frame = +2 / +2
Query: 8 ENFRIHPPGTLLIPRETMRSCVIGGYDVLPGTRIFVNVWAMGRDPSIWDRPEEFSPERFE 187
E FR+HPP T+L+PRETMR +GGYD+ T + VN WA+GRDP+ W PE F ERFE
Sbjct: 350 ETFRMHPPATMLVPRETMRPIRLGGYDIPANTMLMVNAWAIGRDPASWKDPEVFYLERFE 529
Query: 188 GSHVDFRGSSFELLPFGSGRRSCPAIAMGXXXXXXXXXXXXHCFDWQLPEG 340
VDF G +ELLPF +GRR CP +AMG +C +W P G
Sbjct: 530 ELDVDFNGGHYELLPFXAGRRICPVLAMGVANTEFILXNLLYCLNWAPPSG 682
>gb|AV931728.1|AV931728 AV931728 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd23p07 3', mRNA sequence
Length = 610
Score = 147 bits (315), Expect = 5e-035
Identities = 58/142 (40%), Positives = 78/142 (54%)
Frame = +2 / -2
Query: 5 QENFRIHPPGTLLIPRETMRSCVIGGYDVLPGTRIFVNVWAMGRDPSIWDRPEEFSPERF 184
+E+ R+HPP L++P + S +GGY++ G + VNVWA+ RDP +W P EF PERF
Sbjct: 606 KESLRLHPPTPLMLPHKASASVKVGGYNIPKGANVMVNVWAVARDPKVWSSPLEFRPERF 427
Query: 185 EGSHVDFRGSSFELLPFGSGRRSCPAIAMGXXXXXXXXXXXXHCFDWQLPEGMVEEDIDM 364
+D +GS F +LPFG+GRR CP +G H F W LPEG EDI M
Sbjct: 426 LEESIDIKGSDFRVLPFGAGRRVCPGAQLGINLVASMIGHMLHHFKWSLPEGTRPEDISM 247
Query: 365 EETGQLAFRKMVPLCLVPIKRV 430
E+ L PL + R+
Sbjct: 246 MESPGLVTFMGTPLQAIATPRL 181
>gb|BU999462.1|BU999462 HI14J11r HI Hordeum vulgare subsp. vulgare cDNA clone HI14J11
5-PRIME, mRNA sequence
Length = 595
Score = 82.2 bits (173), Expect(3) = 3e-034
Identities = 28/49 (57%), Positives = 37/49 (75%)
Frame = +2 / +2
Query: 5 QENFRIHPPGTLLIPRETMRSCVIGGYDVLPGTRIFVNVWAMGRDPSIW 151
+E R+HPP TLL+PRET+R + GYD+ T+I VN WA+GRDPS+W
Sbjct: 188 KETLRLHPPATLLVPRETIRRIQVAGYDIPAKTKIIVNTWAIGRDPSVW 334
Score = 71.2 bits (149), Expect(3) = 3e-034
Identities = 26/40 (65%), Positives = 32/40 (80%)
Frame = +2 / +2
Query: 152 DRPEEFSPERFEGSHVDFRGSSFELLPFGSGRRSCPAIAM 271
D PEEF PERF+ + +DF G+ FELLPFG+GRR CP +AM
Sbjct: 338 DDPEEFYPERFQDTDIDFSGAHFELLPFGTGRRVCPGLAM 457
Score = 29.5 bits (58), Expect(3) = 3e-034
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +3 / +2
Query: 288 SLSWPTCYIALIGSSLKG 341
S SWPTC+ A GSS G
Sbjct: 473 SSSWPTCFTASTGSSRMG 526
>gb|CA017757.1|CA017757 HV06C16r HV Hordeum vulgare subsp. vulgare cDNA clone HV06C16
5-PRIME, mRNA sequence
Length = 477
Score = 144 bits (309), Expect = 4e-034
Identities = 56/106 (52%), Positives = 68/106 (64%)
Frame = +2 / -1
Query: 107 IFVNVWAMGRDPSIWDRPEEFSPERFEGSHVDFRGSSFELLPFGSGRRSCPAIAMGXXXX 286
+ VN WA+GRDP+ W PE F PERFE VDF G +ELLPFG+GRR CP +AMG
Sbjct: 474 LMVNAWAIGRDPASWKDPEVFYPERFEELDVDFNGGHYELLPFGAGRRICPGLAMGVANT 295
Query: 287 XXXXXXXXHCFDWQLPEGMVEEDIDMEETGQLAFRKMVPLCLVPIK 424
+CF+W LP+GM ED+ +EE G L FRK PL LVP +
Sbjct: 294 EFILANLLYCFNWALPQGMRSEDVGVEEFGGLTFRKKKPLVLVPTR 157
>gb|AV936726.1|AV936726 AV936726 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal5k12 3', mRNA sequence
Length = 774
Score = 90.4 bits (191), Expect(3) = 5e-034
Identities = 34/60 (56%), Positives = 41/60 (68%)
Frame = +2 / -3
Query: 5 QENFRIHPPGTLLIPRETMRSCVIGGYDVLPGTRIFVNVWAMGRDPSIWDRPEEFSPERF 184
+E+ R+HP LL P M C+I GY V GTR+ VN WA+GRDPS W+ PEEF PERF
Sbjct: 547 KESLRLHPVAPLLAPHLAMADCIIDGYIVPAGTRVVVNAWAIGRDPSSWEYPEEFIPERF 368
Score = 47.3 bits (97), Expect(3) = 5e-034
Identities = 14/27 (51%), Positives = 22/27 (81%)
Frame = +2 / -3
Query: 194 HVDFRGSSFELLPFGSGRRSCPAIAMG 274
H++F+G+ F+ LPFG+GRR CP + +G
Sbjct: 346 HINFKGNDFQFLPFGAGRRMCPGMNLG 266
Score = 44.1 bits (90), Expect(3) = 5e-034
Identities = 21/57 (36%), Positives = 29/57 (50%)
Frame = +2 / -3
Query: 317 FDWQLPEGMVEEDIDMEETGQLAFRKMVPLCLVPIKRV*MYNCTGRMIDYTCILLTY 487
FDW+LP G+ +DIDM E L R+ L LVP R+* CI++ +
Sbjct: 223 FDWELPLGVGRKDIDMTEVFGLTVRRKEKLLLVPKSRM*SQKLN*AKYCVICIIMLF 53
>gb|AV936516.1|AV936516 AV936516 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal11k15 3', mRNA sequence
Length = 707
Score = 90.4 bits (191), Expect(3) = 5e-034
Identities = 34/60 (56%), Positives = 41/60 (68%)
Frame = +2 / -2
Query: 5 QENFRIHPPGTLLIPRETMRSCVIGGYDVLPGTRIFVNVWAMGRDPSIWDRPEEFSPERF 184
+E+ R+HP LL P M C+I GY V GTR+ VN WA+GRDPS W+ PEEF PERF
Sbjct: 538 KESLRLHPVAPLLAPHLAMADCIIDGYIVPAGTRVVVNAWAIGRDPSSWEYPEEFIPERF 359
Score = 47.3 bits (97), Expect(3) = 5e-034
Identities = 14/27 (51%), Positives = 22/27 (81%)
Frame = +2 / -2
Query: 194 HVDFRGSSFELLPFGSGRRSCPAIAMG 274
H++F+G+ F+ LPFG+GRR CP + +G
Sbjct: 337 HINFKGNDFQFLPFGAGRRMCPGMNLG 257
Score = 44.1 bits (90), Expect(3) = 5e-034
Identities = 21/57 (36%), Positives = 29/57 (50%)
Frame = +2 / -2
Query: 317 FDWQLPEGMVEEDIDMEETGQLAFRKMVPLCLVPIKRV*MYNCTGRMIDYTCILLTY 487
FDW+LP G+ +DIDM E L R+ L LVP R+* CI++ +
Sbjct: 214 FDWELPLGVGRKDIDMTEVFGLTVRRKEKLLLVPKSRM*SQKLN*AKYCVICIIMLF 44
>gb|BJ548975.1|BJ548975 BJ548975 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal40l11 3', mRNA sequence
Length = 696
Score = 90.4 bits (191), Expect(3) = 5e-034
Identities = 34/60 (56%), Positives = 41/60 (68%)
Frame = +2 / -1
Query: 5 QENFRIHPPGTLLIPRETMRSCVIGGYDVLPGTRIFVNVWAMGRDPSIWDRPEEFSPERF 184
+E+ R+HP LL P M C+I GY V GTR+ VN WA+GRDPS W+ PEEF PERF
Sbjct: 531 KESLRLHPVAPLLAPHLAMADCIIDGYIVPAGTRVVVNAWAIGRDPSSWEYPEEFIPERF 352
Score = 47.3 bits (97), Expect(3) = 5e-034
Identities = 14/27 (51%), Positives = 22/27 (81%)
Frame = +2 / -1
Query: 194 HVDFRGSSFELLPFGSGRRSCPAIAMG 274
H++F+G+ F+ LPFG+GRR CP + +G
Sbjct: 330 HINFKGNDFQFLPFGAGRRMCPGMNLG 250
Score = 44.1 bits (90), Expect(3) = 5e-034
Identities = 21/57 (36%), Positives = 29/57 (50%)
Frame = +2 / -1
Query: 317 FDWQLPEGMVEEDIDMEETGQLAFRKMVPLCLVPIKRV*MYNCTGRMIDYTCILLTY 487
FDW+LP G+ +DIDM E L R+ L LVP R+* CI++ +
Sbjct: 207 FDWELPLGVGRKDIDMTEVFGLTVRRKEKLLLVPKSRM*SQKLN*AKYCVICIIMLF 37
>gb|AV936356.1|AV936356 AV936356 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal11a15 3', mRNA sequence
Length = 683
Score = 90.4 bits (191), Expect(3) = 5e-034
Identities = 34/60 (56%), Positives = 41/60 (68%)
Frame = +2 / -2
Query: 5 QENFRIHPPGTLLIPRETMRSCVIGGYDVLPGTRIFVNVWAMGRDPSIWDRPEEFSPERF 184
+E+ R+HP LL P M C+I GY V GTR+ VN WA+GRDPS W+ PEEF PERF
Sbjct: 517 KESLRLHPVAPLLAPHLAMADCIIDGYIVPAGTRVVVNAWAIGRDPSSWEYPEEFIPERF 338
Score = 47.3 bits (97), Expect(3) = 5e-034
Identities = 14/27 (51%), Positives = 22/27 (81%)
Frame = +2 / -2
Query: 194 HVDFRGSSFELLPFGSGRRSCPAIAMG 274
H++F+G+ F+ LPFG+GRR CP + +G
Sbjct: 316 HINFKGNDFQFLPFGAGRRMCPGMNLG 236
Score = 44.1 bits (90), Expect(3) = 5e-034
Identities = 21/57 (36%), Positives = 29/57 (50%)
Frame = +2 / -2
Query: 317 FDWQLPEGMVEEDIDMEETGQLAFRKMVPLCLVPIKRV*MYNCTGRMIDYTCILLTY 487
FDW+LP G+ +DIDM E L R+ L LVP R+* CI++ +
Sbjct: 193 FDWELPLGVGRKDIDMTEVFGLTVRRKEKLLLVPKSRM*SQKLN*AKYCVICIIMLF 23
>gb|BJ548006.1|BJ548006 BJ548006 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal15n22 3', mRNA sequence
Length = 684
Score = 90.4 bits (191), Expect(3) = 5e-034
Identities = 34/60 (56%), Positives = 41/60 (68%)
Frame = +2 / -3
Query: 5 QENFRIHPPGTLLIPRETMRSCVIGGYDVLPGTRIFVNVWAMGRDPSIWDRPEEFSPERF 184
+E+ R+HP LL P M C+I GY V GTR+ VN WA+GRDPS W+ PEEF PERF
Sbjct: 517 KESLRLHPVAPLLAPHLAMADCIIDGYIVPAGTRVVVNAWAIGRDPSSWEYPEEFIPERF 338
Score = 47.3 bits (97), Expect(3) = 5e-034
Identities = 14/27 (51%), Positives = 22/27 (81%)
Frame = +2 / -3
Query: 194 HVDFRGSSFELLPFGSGRRSCPAIAMG 274
H++F+G+ F+ LPFG+GRR CP + +G
Sbjct: 316 HINFKGNDFQFLPFGAGRRMCPGMNLG 236
Score = 44.1 bits (90), Expect(3) = 5e-034
Identities = 21/57 (36%), Positives = 29/57 (50%)
Frame = +2 / -3
Query: 317 FDWQLPEGMVEEDIDMEETGQLAFRKMVPLCLVPIKRV*MYNCTGRMIDYTCILLTY 487
FDW+LP G+ +DIDM E L R+ L LVP R+* CI++ +
Sbjct: 193 FDWELPLGVGRKDIDMTEVFGLTVRRKEKLLLVPKSRM*SQKLN*AKYCVICIIMLF 23
>gb|AV936349.1|AV936349 AV936349 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal11a04 3', mRNA sequence
Length = 668
Score = 90.4 bits (191), Expect(3) = 5e-034
Identities = 34/60 (56%), Positives = 41/60 (68%)
Frame = +2 / -1
Query: 5 QENFRIHPPGTLLIPRETMRSCVIGGYDVLPGTRIFVNVWAMGRDPSIWDRPEEFSPERF 184
+E+ R+HP LL P M C+I GY V GTR+ VN WA+GRDPS W+ PEEF PERF
Sbjct: 539 KESLRLHPVAPLLAPHLAMADCIIDGYIVPAGTRVVVNAWAIGRDPSSWEYPEEFIPERF 360
Score = 47.3 bits (97), Expect(3) = 5e-034
Identities = 14/27 (51%), Positives = 22/27 (81%)
Frame = +2 / -1
Query: 194 HVDFRGSSFELLPFGSGRRSCPAIAMG 274
H++F+G+ F+ LPFG+GRR CP + +G
Sbjct: 338 HINFKGNDFQFLPFGAGRRMCPGMNLG 258
Score = 44.1 bits (90), Expect(3) = 5e-034
Identities = 21/57 (36%), Positives = 29/57 (50%)
Frame = +2 / -1
Query: 317 FDWQLPEGMVEEDIDMEETGQLAFRKMVPLCLVPIKRV*MYNCTGRMIDYTCILLTY 487
FDW+LP G+ +DIDM E L R+ L LVP R+* CI++ +
Sbjct: 215 FDWELPLGVGRKDIDMTEVFGLTVRRKEKLLLVPKSRM*SQKLN*AKYCVICIIMLF 45
>gb|BJ547960.1|BJ547960 BJ547960 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal12i23 3', mRNA sequence
Length = 669
Score = 90.4 bits (191), Expect(3) = 5e-034
Identities = 34/60 (56%), Positives = 41/60 (68%)
Frame = +2 / -3
Query: 5 QENFRIHPPGTLLIPRETMRSCVIGGYDVLPGTRIFVNVWAMGRDPSIWDRPEEFSPERF 184
+E+ R+HP LL P M C+I GY V GTR+ VN WA+GRDPS W+ PEEF PERF
Sbjct: 544 KESLRLHPVAPLLAPHLAMADCIIDGYIVPAGTRVVVNAWAIGRDPSSWEYPEEFIPERF 365
Score = 47.3 bits (97), Expect(3) = 5e-034
Identities = 14/27 (51%), Positives = 22/27 (81%)
Frame = +2 / -3
Query: 194 HVDFRGSSFELLPFGSGRRSCPAIAMG 274
H++F+G+ F+ LPFG+GRR CP + +G
Sbjct: 343 HINFKGNDFQFLPFGAGRRMCPGMNLG 263
Score = 44.1 bits (90), Expect(3) = 5e-034
Identities = 21/57 (36%), Positives = 29/57 (50%)
Frame = +2 / -3
Query: 317 FDWQLPEGMVEEDIDMEETGQLAFRKMVPLCLVPIKRV*MYNCTGRMIDYTCILLTY 487
FDW+LP G+ +DIDM E L R+ L LVP R+* CI++ +
Sbjct: 220 FDWELPLGVGRKDIDMTEVFGLTVRRKEKLLLVPKSRM*SQKLN*AKYCVICIIMLF 50
>gb|BJ548998.1|BJ548998 BJ548998 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal16j19 3', mRNA sequence
Length = 669
Score = 90.4 bits (191), Expect(3) = 5e-034
Identities = 34/60 (56%), Positives = 41/60 (68%)
Frame = +2 / -2
Query: 5 QENFRIHPPGTLLIPRETMRSCVIGGYDVLPGTRIFVNVWAMGRDPSIWDRPEEFSPERF 184
+E+ R+HP LL P M C+I GY V GTR+ VN WA+GRDPS W+ PEEF PERF
Sbjct: 539 KESLRLHPVAPLLAPHLAMADCIIDGYIVPAGTRVVVNAWAIGRDPSSWEYPEEFIPERF 360
Score = 47.3 bits (97), Expect(3) = 5e-034
Identities = 14/27 (51%), Positives = 22/27 (81%)
Frame = +2 / -2
Query: 194 HVDFRGSSFELLPFGSGRRSCPAIAMG 274
H++F+G+ F+ LPFG+GRR CP + +G
Sbjct: 338 HINFKGNDFQFLPFGAGRRMCPGMNLG 258
Score = 44.1 bits (90), Expect(3) = 5e-034
Identities = 21/57 (36%), Positives = 29/57 (50%)
Frame = +2 / -2
Query: 317 FDWQLPEGMVEEDIDMEETGQLAFRKMVPLCLVPIKRV*MYNCTGRMIDYTCILLTY 487
FDW+LP G+ +DIDM E L R+ L LVP R+* CI++ +
Sbjct: 215 FDWELPLGVGRKDIDMTEVFGLTVRRKEKLLLVPKSRM*SQKLN*AKYCVICIIMLF 45
>gb|BJ548386.1|BJ548386 BJ548386 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal24a03 3', mRNA sequence
Length = 645
Score = 90.4 bits (191), Expect(3) = 5e-034
Identities = 34/60 (56%), Positives = 41/60 (68%)
Frame = +2 / -2
Query: 5 QENFRIHPPGTLLIPRETMRSCVIGGYDVLPGTRIFVNVWAMGRDPSIWDRPEEFSPERF 184
+E+ R+HP LL P M C+I GY V GTR+ VN WA+GRDPS W+ PEEF PERF
Sbjct: 518 KESLRLHPVAPLLAPHLAMADCIIDGYIVPAGTRVVVNAWAIGRDPSSWEYPEEFIPERF 339
Score = 47.3 bits (97), Expect(3) = 5e-034
Identities = 14/27 (51%), Positives = 22/27 (81%)
Frame = +2 / -2
Query: 194 HVDFRGSSFELLPFGSGRRSCPAIAMG 274
H++F+G+ F+ LPFG+GRR CP + +G
Sbjct: 317 HINFKGNDFQFLPFGAGRRMCPGMNLG 237
Score = 44.1 bits (90), Expect(3) = 5e-034
Identities = 21/57 (36%), Positives = 29/57 (50%)
Frame = +2 / -2
Query: 317 FDWQLPEGMVEEDIDMEETGQLAFRKMVPLCLVPIKRV*MYNCTGRMIDYTCILLTY 487
FDW+LP G+ +DIDM E L R+ L LVP R+* CI++ +
Sbjct: 194 FDWELPLGVGRKDIDMTEVFGLTVRRKEKLLLVPKSRM*SQKLN*AKYCVICIIMLF 24
>gb|AV935198.1|AV935198 AV935198 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal3e02 3', mRNA sequence
Length = 597
Score = 90.4 bits (191), Expect(3) = 5e-034
Identities = 34/60 (56%), Positives = 41/60 (68%)
Frame = +2 / -3
Query: 5 QENFRIHPPGTLLIPRETMRSCVIGGYDVLPGTRIFVNVWAMGRDPSIWDRPEEFSPERF 184
+E+ R+HP LL P M C+I GY V GTR+ VN WA+GRDPS W+ PEEF PERF
Sbjct: 538 KESLRLHPVAPLLAPHLAMADCIIDGYIVPAGTRVVVNAWAIGRDPSSWEYPEEFIPERF 359
Score = 47.3 bits (97), Expect(3) = 5e-034
Identities = 14/27 (51%), Positives = 22/27 (81%)
Frame = +2 / -3
Query: 194 HVDFRGSSFELLPFGSGRRSCPAIAMG 274
H++F+G+ F+ LPFG+GRR CP + +G
Sbjct: 337 HINFKGNDFQFLPFGAGRRMCPGMNLG 257
Score = 44.1 bits (90), Expect(3) = 5e-034
Identities = 21/57 (36%), Positives = 29/57 (50%)
Frame = +2 / -3
Query: 317 FDWQLPEGMVEEDIDMEETGQLAFRKMVPLCLVPIKRV*MYNCTGRMIDYTCILLTY 487
FDW+LP G+ +DIDM E L R+ L LVP R+* CI++ +
Sbjct: 214 FDWELPLGVGRKDIDMTEVFGLTVRRKEKLLLVPKSRM*SQKLN*AKYCVICIIMLF 44
>gb|BJ549009.1|BJ549009 BJ549009 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal38d04 3', mRNA sequence
Length = 552
Score = 90.4 bits (191), Expect(3) = 5e-034
Identities = 34/60 (56%), Positives = 41/60 (68%)
Frame = +2 / -1
Query: 5 QENFRIHPPGTLLIPRETMRSCVIGGYDVLPGTRIFVNVWAMGRDPSIWDRPEEFSPERF 184
+E+ R+HP LL P M C+I GY V GTR+ VN WA+GRDPS W+ PEEF PERF
Sbjct: 522 KESLRLHPVAPLLAPHLXMADCIIDGYIVPAGTRVVVNAWAIGRDPSSWEYPEEFIPERF 343
Score = 47.3 bits (97), Expect(3) = 5e-034
Identities = 14/27 (51%), Positives = 22/27 (81%)
Frame = +2 / -1
Query: 194 HVDFRGSSFELLPFGSGRRSCPAIAMG 274
H++F+G+ F+ LPFG+GRR CP + +G
Sbjct: 321 HINFKGNDFQFLPFGAGRRMCPGMNLG 241
Score = 44.1 bits (90), Expect(3) = 5e-034
Identities = 21/57 (36%), Positives = 29/57 (50%)
Frame = +2 / -1
Query: 317 FDWQLPEGMVEEDIDMEETGQLAFRKMVPLCLVPIKRV*MYNCTGRMIDYTCILLTY 487
FDW+LP G+ +DIDM E L R+ L LVP R+* CI++ +
Sbjct: 198 FDWELPLGVGRKDIDMTEVFGLTVRRKEKLLLVPKSRM*SQKLN*AKYCVICIIMLF 28
>gb|AV920535.1|AV920535 AV920535 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags14g24 3', mRNA sequence
Length = 499
Score = 143 bits (307), Expect = 7e-034
Identities = 56/108 (51%), Positives = 68/108 (62%)
Frame = +2 / -1
Query: 101 TRIFVNVWAMGRDPSIWDRPEEFSPERFEGSHVDFRGSSFELLPFGSGRRSCPAIAMGXX 280
T + VN WA+GRDP+ W PE F P RFE VDF G +ELLPFG+GRR CP +AMG
Sbjct: 493 TMLMVNAWAIGRDPASWKDPEVFYPXRFEELDVDFNGGHYELLPFGAGRRICPGLAMGVA 314
Query: 281 XXXXXXXXXXHCFDWQLPEGMVEEDIDMEETGQLAFRKMVPLCLVPIK 424
+CF+W LP+GM ED+ +EE G L FRK PL LVP +
Sbjct: 313 NTEFILANLLYCFNWALPQGMRSEDVGVEEFGGLTFRKKKPLVLVPTR 170
>gb|BQ471971.1|BQ471971 HV04A16r HV Hordeum vulgare subsp. vulgare cDNA clone HV04A16
5-PRIME, mRNA sequence
Length = 469
Score = 143 bits (307), Expect = 7e-034
Identities = 56/104 (53%), Positives = 67/104 (64%)
Frame = +2 / -2
Query: 113 VNVWAMGRDPSIWDRPEEFSPERFEGSHVDFRGSSFELLPFGSGRRSCPAIAMGXXXXXX 292
VN WA+GRDP+ W PE F PERFE VDF G +ELLPFG+GRR CP +AMG
Sbjct: 468 VNAWAIGRDPASWKDPEVFYPERFEELDVDFNGGHYELLPFGAGRRICPGLAMGVANTEF 289
Query: 293 XXXXXXHCFDWQLPEGMVEEDIDMEETGQLAFRKMVPLCLVPIK 424
+CF+W LP+GM ED+ +EE G L FRK PL LVP +
Sbjct: 288 ILANLLYCFNWALPQGMRSEDVGVEEFGGLTFRKKKPLVLVPTR 157
>gb|BJ475646.1|BJ475646 BJ475646 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal29b02 3', mRNA sequence
Length = 617
Score = 90.0 bits (190), Expect(2) = 1e-032
Identities = 37/85 (43%), Positives = 49/85 (57%)
Frame = +2 / -2
Query: 164 EFSPERFEGSHVDFRGSSFELLPFGSGRRSCPAIAMGXXXXXXXXXXXXHCFDWQLPEGM 343
EF PERF GS VD +G ELLPFG+GRR CPA +G H + W+LP+GM
Sbjct: 451 EFQPERFLGSKVDVKGHDLELLPFGAGRRMCPAHGLGLKMVQLVLANLLHGYAWRLPDGM 272
Query: 344 VEEDIDMEETGQLAFRKMVPLCLVP 418
E++ MEE ++ +M L +P
Sbjct: 271 AAEELSMEEKFGISVSRMHHLHAIP 197
Score = 69.3 bits (145), Expect(2) = 1e-032
Identities = 25/49 (51%), Positives = 34/49 (69%)
Frame = +2 / -2
Query: 5 QENFRIHPPGTLLIPRETMRSCVIGGYDVLPGTRIFVNVWAMGRDPSIW 151
+E R+HP LLIPR + I GY++ GTR+ VNVWA+GRDP++W
Sbjct: 613 KETLRLHPVVPLLIPRVSREHTSIAGYEIPVGTRVLVNVWAIGRDPTVW 467
>gb|BF624213.1|BF624213 HVSMEa0012L22f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0012L22f, mRNA sequence
Length = 501
Score = 138 bits (297), Expect = 2e-032
Identities = 53/106 (50%), Positives = 67/106 (63%)
Frame = +2 / -3
Query: 98 GTRIFVNVWAMGRDPSIWDRPEEFSPERFEGSHVDFRGSSFELLPFGSGRRSCPAIAMGX 277
G+R+FVNVWA+G D +WD PE+F PERF GS +DFRG FELLPFG+GRR CP + +
Sbjct: 490 GSRVFVNVWAIGPDKDVWDEPEKFMPERFLGSTIDFRGVDFELLPFGAGRRICPGMTLAA 311
Query: 278 XXXXXXXXXXXHCFDWQLPEGMVEEDIDMEETGQLAFRKMVPLCLV 415
H F W LP + + IDME+ L K+VPLC+V
Sbjct: 310 RMVHLMLASLLHQFKWSLPVELERDGIDMEDKFGLTLTKVVPLCIV 173
>gb|AU252315.1|AU252315 AU252315 salt-stressed barley root cDNA Hordeum vulgare subsp.
vulgare cDNA clone BR-C08 similar to cytochrome P450
CYP99A1, mRNA sequence
Length = 540
Score = 138 bits (297), Expect = 2e-032
Identities = 55/137 (40%), Positives = 75/137 (54%)
Frame = +2 / +1
Query: 5 QENFRIHPPGTLLIPRETMRSCVIGGYDVLPGTRIFVNVWAMGRDPSIWDRPEEFSPERF 184
+E R++P LL+P +C +GG+++ GTR+ VN WAM R P W+ EEF PERF
Sbjct: 40 KETMRLNPVVPLLVPHLCRETCDVGGFEIKEGTRVLVNAWAMARSPEYWENAEEFMPERF 219
Query: 185 EGSHVDFRGSSFELLPFGSGRRSCPAIAMGXXXXXXXXXXXXHCFDWQLPEGMVEEDIDM 364
E ++ S FE LPFG+GRR CP G + FDW LP G +++DM
Sbjct: 220 EDGTATYKASRFEYLPFGTGRRKCPGDTFGLATLDLIVARLLYYFDWSLPAGTRPDELDM 399
Query: 365 EETGQLAFRKMVPLCLV 415
E + L R+ L LV
Sbjct: 400 ETSLGLTARRKNQLHLV 450
>gb|BJ463386.1|BJ463386 BJ463386 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags27g14 5', mRNA sequence
Length = 528
Score = 138 bits (295), Expect = 3e-032
Identities = 51/86 (59%), Positives = 62/86 (72%)
Frame = +2 / +2
Query: 8 ENFRIHPPGTLLIPRETMRSCVIGGYDVLPGTRIFVNVWAMGRDPSIWDRPEEFSPERFE 187
E FR+HPP T+L+PRETMR +GGYD+ T + VN WA+GRDP+ W PE F PERFE
Sbjct: 269 ETFRMHPPATMLVPRETMRPIRLGGYDIPANTMLMVNAWAIGRDPASWKDPEVFYPERFE 448
Query: 188 GSHVDFRGSSFELLPFGSGRRSCPAI 265
VDF G +ELLPFG+GRR CP +
Sbjct: 449 ELDVDFNGGHYELLPFGAGRRICPGL 526
>gb|BJ466861.1|BJ466861 BJ466861 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags34j09 3', mRNA sequence
Length = 719
Score = 88.1 bits (186), Expect(2) = 4e-032
Identities = 31/60 (51%), Positives = 42/60 (70%)
Frame = +2 / -3
Query: 5 QENFRIHPPGTLLIPRETMRSCVIGGYDVLPGTRIFVNVWAMGRDPSIWDRPEEFSPERF 184
+E R+H PG L++P +M C+I GY + GTR F+N +A+ RDPS W+ PEEF PERF
Sbjct: 519 KETLRLHMPGPLMVPHLSMDECIINGYTIPSGTRTFINTYAIQRDPSNWESPEEFMPERF 340
Score = 69.3 bits (145), Expect(2) = 4e-032
Identities = 29/75 (38%), Positives = 39/75 (52%)
Frame = +2 / -3
Query: 197 VDFRGSSFELLPFGSGRRSCPAIAMGXXXXXXXXXXXXHCFDWQLPEGMVEEDIDMEETG 376
+D++G+ F+ PFGSGRR CP I + FDW+LP EE I+M ET
Sbjct: 315 MDYKGNDFQYFPFGSGRRICPGINFATATIQLMLTNLMYHFDWKLPPESEEEGINMTETF 136
Query: 377 QLAFRKMVPLCLVPI 421
L + L LVP+
Sbjct: 135 GLTVHRKEKLLLVPL 91
>gb|AV919647.1|AV919647 AV919647 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags6p16 3', mRNA sequence
Length = 703
Score = 88.1 bits (186), Expect(2) = 4e-032
Identities = 31/60 (51%), Positives = 42/60 (70%)
Frame = +2 / -2
Query: 5 QENFRIHPPGTLLIPRETMRSCVIGGYDVLPGTRIFVNVWAMGRDPSIWDRPEEFSPERF 184
+E R+H PG L++P +M C+I GY + GTR F+N +A+ RDPS W+ PEEF PERF
Sbjct: 537 KETLRLHMPGPLMVPHLSMDECIINGYTIPSGTRTFINTYAIQRDPSNWESPEEFMPERF 358
Score = 69.3 bits (145), Expect(2) = 4e-032
Identities = 29/75 (38%), Positives = 39/75 (52%)
Frame = +2 / -2
Query: 197 VDFRGSSFELLPFGSGRRSCPAIAMGXXXXXXXXXXXXHCFDWQLPEGMVEEDIDMEETG 376
+D++G+ F+ PFGSGRR CP I + FDW+LP EE I+M ET
Sbjct: 333 MDYKGNDFQYFPFGSGRRICPGINFATATIQLMLTNLMYHFDWKLPPESEEEGINMTETF 154
Query: 377 QLAFRKMVPLCLVPI 421
L + L LVP+
Sbjct: 153 GLTVHRKEKLLLVPL 109
>gb|AV913934.1|AV913934 AV913934 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags23m23 5', mRNA sequence
Length = 660
Score = 88.1 bits (186), Expect(2) = 4e-032
Identities = 31/60 (51%), Positives = 42/60 (70%)
Frame = +2 / +2
Query: 5 QENFRIHPPGTLLIPRETMRSCVIGGYDVLPGTRIFVNVWAMGRDPSIWDRPEEFSPERF 184
+E R+H PG L++P +M C+I GY + GTR F+N +A+ RDPS W+ PEEF PERF
Sbjct: 182 KETLRLHMPGPLMVPHLSMDECIINGYTIPSGTRTFINTYAIQRDPSNWESPEEFMPERF 361
Score = 69.3 bits (145), Expect(2) = 4e-032
Identities = 29/75 (38%), Positives = 39/75 (52%)
Frame = +2 / +2
Query: 197 VDFRGSSFELLPFGSGRRSCPAIAMGXXXXXXXXXXXXHCFDWQLPEGMVEEDIDMEETG 376
+D++G+ F+ PFGSGRR CP I + FDW+LP EE I+M ET
Sbjct: 386 MDYKGNDFQYFPFGSGRRICPGINFATATIQLMLTNLMYHFDWKLPPESEEEGINMTETF 565
Query: 377 QLAFRKMVPLCLVPI 421
L + L LVP+
Sbjct: 566 GLTVHRKEKLLLVPL 610
>gb|AV918301.1|AV918301 AV918301 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags20j07 3', mRNA sequence
Length = 660
Score = 88.1 bits (186), Expect(2) = 4e-032
Identities = 31/60 (51%), Positives = 42/60 (70%)
Frame = +2 / -3
Query: 5 QENFRIHPPGTLLIPRETMRSCVIGGYDVLPGTRIFVNVWAMGRDPSIWDRPEEFSPERF 184
+E R+H PG L++P +M C+I GY + GTR F+N +A+ RDPS W+ PEEF PERF
Sbjct: 520 KETLRLHMPGPLMVPHLSMDECIINGYTIPSGTRTFINTYAIQRDPSNWESPEEFMPERF 341
Score = 69.3 bits (145), Expect(2) = 4e-032
Identities = 29/75 (38%), Positives = 39/75 (52%)
Frame = +2 / -3
Query: 197 VDFRGSSFELLPFGSGRRSCPAIAMGXXXXXXXXXXXXHCFDWQLPEGMVEEDIDMEETG 376
+D++G+ F+ PFGSGRR CP I + FDW+LP EE I+M ET
Sbjct: 316 MDYKGNDFQYFPFGSGRRICPGINFATATIQLMLTNLMYHFDWKLPPESEEEGINMTETF 137
Query: 377 QLAFRKMVPLCLVPI 421
L + L LVP+
Sbjct: 136 GLTVHRKEKLLLVPL 92
>gb|AV918176.1|AV918176 AV918176 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags20c01 3', mRNA sequence
Length = 655
Score = 88.1 bits (186), Expect(2) = 4e-032
Identities = 31/60 (51%), Positives = 42/60 (70%)
Frame = +2 / -2
Query: 5 QENFRIHPPGTLLIPRETMRSCVIGGYDVLPGTRIFVNVWAMGRDPSIWDRPEEFSPERF 184
+E R+H PG L++P +M C+I GY + GTR F+N +A+ RDPS W+ PEEF PERF
Sbjct: 555 KETLRLHMPGPLMVPHLSMDECIINGYTIPSGTRTFINTYAIQRDPSNWESPEEFMPERF 376
Score = 69.3 bits (145), Expect(2) = 4e-032
Identities = 29/75 (38%), Positives = 39/75 (52%)
Frame = +2 / -2
Query: 197 VDFRGSSFELLPFGSGRRSCPAIAMGXXXXXXXXXXXXHCFDWQLPEGMVEEDIDMEETG 376
+D++G+ F+ PFGSGRR CP I + FDW+LP EE I+M ET
Sbjct: 351 MDYKGNDFQYFPFGSGRRICPGINFATATIQLMLTNLMYHFDWKLPPESEEEGINMTETF 172
Query: 377 QLAFRKMVPLCLVPI 421
L + L LVP+
Sbjct: 171 GLTVHRKEKLLLVPL 127
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 294,524,080
Number of Sequences: 312970
Number of extensions: 5766270
Number of successful extensions: 127616
Number of sequences better than 1.0e-020: 144
length of database: 58,378,179
effective HSP length: 50
effective length of database: 42,729,679
effective search space used: 5512128591
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)