TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2750951.2.1
(1014 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AV916387.1|AV916387 AV916387 K. Sato unpublished cDNA li... 299 1e-080
gb|BJ462621.1|BJ462621 BJ462621 K. Sato unpublished cDNA li... 299 1e-080
gb|CK122337.1|CK122337 BES1824102p02 BES1824 Hordeum vulgar... 297 7e-080
gb|AV916990.1|AV916990 AV916990 K. Sato unpublished cDNA li... 285 3e-076
gb|BU988606.1|BU988606 HF18C11r HF Hordeum vulgare subsp. v... 243 1e-074
gb|BU978697.1|BU978697 HA14A09r HA Hordeum vulgare subsp. v... 273 1e-072
gb|BU997151.1|BU997151 HI07B06r HI Hordeum vulgare subsp. v... 273 1e-072
gb|AV916601.1|AV916601 AV916601 K. Sato unpublished cDNA li... 270 9e-072
gb|AV913799.1|AV913799 AV913799 K. Sato unpublished cDNA li... 264 4e-070
gb|AV916192.1|AV916192 AV916192 K. Sato unpublished cDNA li... 264 4e-070
gb|CA026968.1|CA026968 HZ57H22r HZ Hordeum vulgare subsp. v... 261 4e-069
gb|BU997130.1|BU997130 HI07A02r HI Hordeum vulgare subsp. v... 261 5e-069
gb|CA026718.1|CA026718 HZ56L20r HZ Hordeum vulgare subsp. v... 237 8e-062
gb|BE601754.2|BE601754 HVSMEh0099G19f Hordeum vulgare 5-45 ... 234 5e-061
gb|AV916609.1|AV916609 AV916609 K. Sato unpublished cDNA li... 222 3e-057
gb|BF627691.3|BF627691 HVSMEb0005I17f Hordeum vulgare seedl... 189 4e-057
gb|BJ462504.1|BJ462504 BJ462504 K. Sato unpublished cDNA li... 219 2e-056
gb|BF253874.2|BF253874 HVSMEf0002F19f Hordeum vulgare seedl... 215 4e-055
gb|BF257586.2|BF257586 HVSMEf0013E13f Hordeum vulgare seedl... 196 2e-054
gb|AV917009.1|AV917009 AV917009 K. Sato unpublished cDNA li... 204 9e-052
gb|BJ465257.1|BJ465257 BJ465257 K. Sato unpublished cDNA li... 204 9e-052
gb|BU976210.1|BU976210 HA03F10r HA Hordeum vulgare subsp. v... 198 4e-050
gb|BF620280.1|BF620280 HVSMEc0019E21f Hordeum vulgare seedl... 110 6e-050
gb|BJ464778.1|BJ464778 BJ464778 K. Sato unpublished cDNA li... 186 2e-046
gb|BQ468641.1|BQ468641 HM01N16T HM Hordeum vulgare subsp. v... 186 2e-046
gb|BU985650.1|BU985650 HF08D13r HF Hordeum vulgare subsp. v... 185 4e-046
gb|AV913514.1|AV913514 AV913514 K. Sato unpublished cDNA li... 149 2e-043
gb|BJ451325.1|BJ451325 BJ451325 K. Sato unpublished cDNA li... 149 2e-043
gb|BQ764926.1|BQ764926 EBca01_SQ005_E07_R carpel, pre-anthe... 174 8e-043
gb|BU995874.1|BU995874 HM11K09r HM Hordeum vulgare subsp. v... 145 1e-042
gb|CA032870.1|CA032870 HX14G24r HX Hordeum vulgare subsp. v... 172 2e-042
gb|BI947104.1|BI947104 HVSMEl0003L04f Hordeum vulgare spike... 144 5e-042
gb|BI949850.1|BI949850 HVSMEl0016H12f Hordeum vulgare spike... 169 3e-041
gb|BJ463364.1|BJ463364 BJ463364 K. Sato unpublished cDNA li... 163 1e-039
gb|CA002958.1|CA002958 HS09A03r HS Hordeum vulgare subsp. v... 133 5e-039
gb|AL503928.1|AL503928 AL503928 Hordeum vulgare Barke roots... 153 1e-038
gb|BU984656.1|BU984656 HF04J11r HF Hordeum vulgare subsp. v... 126 8e-037
gb|AV917011.1|AV917011 AV917011 K. Sato unpublished cDNA li... 154 1e-036
gb|BQ466003.1|BQ466003 HT01E20T HT Hordeum vulgare subsp. v... 147 1e-036
gb|CA024908.1|CA024908 HZ50K17r HZ Hordeum vulgare subsp. v... 153 1e-036
gb|BI778494.2|BI778494 EBro07_SQ003_H09_R root, 3 week, red... 152 3e-036
gb|CA003210.1|CA003210 HS09M01r HS Hordeum vulgare subsp. v... 133 4e-036
gb|BQ464194.1|BQ464194 HF01J17T HF Hordeum vulgare subsp. v... 123 5e-036
gb|AL504759.1|AL504759 AL504759 Hordeum vulgare Barke roots... 150 9e-036
gb|CA014891.1|CA014891 HT12K07r HT Hordeum vulgare subsp. v... 126 9e-036
gb|BE194623.2|BE194623 HVSMEh0086E10f Hordeum vulgare 5-45 ... 124 2e-035
gb|BU997000.1|BU997000 HI06J05r HI Hordeum vulgare subsp. v... 148 4e-035
gb|BQ763070.1|BQ763070 EBro02_SQ007_H01_R root, 3 week, hyd... 147 1e-034
gb|BQ472678.1|BQ472678 HB01N04r BC Hordeum vulgare subsp. v... 118 2e-034
gb|BQ472621.1|BQ472621 HB01P17r BC Hordeum vulgare subsp. v... 118 2e-034
gb|AL503319.1|AL503319 AL503319 Hordeum vulgare Barke roots... 145 3e-034
gb|BF630973.2|BF630973 HVSMEb0014J12f Hordeum vulgare seedl... 117 3e-034
gb|AV833484.1|AV833484 AV833484 K. Sato unpublished cDNA li... 118 4e-034
gb|BF621404.2|BF621404 HVSMEa0006M24f Hordeum vulgare seedl... 117 2e-032
gb|CA023296.1|CA023296 HZ45M20r HZ Hordeum vulgare subsp. v... 139 2e-032
gb|BI947961.1|BI947961 HVSMEl0007J23f Hordeum vulgare spike... 111 3e-032
gb|BI952746.1|BI952746 HVSMEm0007J23f Hordeum vulgare green... 111 3e-032
gb|CA008162.1|CA008162 HU10B07r HU Hordeum vulgare subsp. v... 107 3e-031
gb|AF490468.1| Hordeum vulgare subsp. vulgare cultivar More... 117 9e-031
gb|AF490467.1| Hordeum vulgare subsp. vulgare cultivar Igri... 117 9e-031
gb|CA012703.1|CA012703 HT06D02r HT Hordeum vulgare subsp. v... 133 2e-030
gb|CA013288.1|CA013288 HT07P04r HT Hordeum vulgare subsp. v... 133 2e-030
gb|AV910207.1|AV910207 AV910207 K. Sato unpublished cDNA li... 116 5e-030
gb|BQ472269.1|BQ472269 HV04O11r HV Hordeum vulgare subsp. v... 130 1e-029
gb|AF490470.1| Hordeum vulgare subsp. vulgare cultivar More... 119 1e-029
gb|AF490469.1| Hordeum vulgare subsp. vulgare cultivar Igri... 119 1e-029
gb|AV933093.1|AV933093 AV933093 K. Sato unpublished cDNA li... 130 1e-029
gb|CA029214.1|CA029214 HZ64I22r HZ Hordeum vulgare subsp. v... 127 1e-028
gb|CB878975.1|CB878975 HP10H22T HP Hordeum vulgare subsp. v... 127 1e-028
gb|CA014847.1|CA014847 HT12I07r HT Hordeum vulgare subsp. v... 127 1e-028
gb|CA015390.1|CA015390 HT14C16r HT Hordeum vulgare subsp. v... 127 1e-028
gb|AV915416.1|AV915416 AV915416 K. Sato unpublished cDNA li... 114 4e-028
gb|BI951286.1|BI951286 HVSMEl0025F23f Hordeum vulgare spike... 105 1e-027
gb|CA025312.1|CA025312 HZ51M10r HZ Hordeum vulgare subsp. v... 123 2e-027
gb|AV923554.1|AV923554 AV923554 K. Sato unpublished cDNA li... 121 6e-027
gb|BJ447807.1|BJ447807 BJ447807 K. Sato unpublished cDNA li... 121 6e-027
gb|BU998469.1|BU998469 HI11C15r HI Hordeum vulgare subsp. v... 100 7e-027
gb|BF624761.3|BF624761 HVSMEa0017K20f Hordeum vulgare seedl... 121 8e-027
gb|BU990132.1|BU990132 HF24C23r HF Hordeum vulgare subsp. v... 120 1e-026
gb|BI952657.1|BI952657 HVSMEm0007E17f Hordeum vulgare green... 120 2e-026
gb|CA015072.1|CA015072 HT13C22r HT Hordeum vulgare subsp. v... 119 2e-026
gb|AF490473.1| Hordeum vulgare subsp. vulgare cultivar Igri... 103 4e-025
gb|AF490471.1| Hordeum vulgare subsp. vulgare cultivar CI16... 103 4e-025
gb|AF490472.1| Hordeum vulgare subsp. vulgare cultivar More... 103 4e-025
gb|BJ475173.1|BJ475173 BJ475173 K. Sato unpublished cDNA li... 103 4e-025
gb|BJ446858.1|BJ446858 BJ446858 K. Sato unpublished cDNA li... 103 4e-025
gb|BJ454861.1|BJ454861 BJ454861 K. Sato unpublished cDNA li... 103 4e-025
gb|BJ475635.1|BJ475635 BJ475635 K. Sato unpublished cDNA li... 103 4e-025
gb|BJ474681.1|BJ474681 BJ474681 K. Sato unpublished cDNA li... 103 4e-025
gb|BJ470824.1|BJ470824 BJ470824 K. Sato unpublished cDNA li... 103 4e-025
gb|AL508422.1|AL508422 AL508422 Hordeum vulgare Barke devel... 114 1e-024
gb|BG343192.1|BG343192 HVSMEg0005A20f Hordeum vulgare pre-a... 113 1e-024
gb|CB882677.1|CB882677 HL02I17w HL Hordeum vulgare subsp. v... 112 3e-024
gb|AV913558.1|AV913558 AV913558 K. Sato unpublished cDNA li... 111 5e-024
gb|BU994352.1|BU994352 HM06L21r HM Hordeum vulgare subsp. v... 110 2e-023
gb|AV912902.1|AV912902 AV912902 K. Sato unpublished cDNA li... 81 2e-023
gb|BJ547606.1|BJ547606 BJ547606 K. Sato unpublished cDNA li... 81 2e-023
gb|BF626949.2|BF626949 HVSMEb0001M13f Hordeum vulgare seedl... 108 4e-023
gb|AV924652.1|AV924652 AV924652 K. Sato unpublished cDNA li... 84 6e-023
gb|BQ763048.1|BQ763048 EBro02_SQ007_C02_R root, 3 week, hyd... 68 1e-022
gb|BJ455673.1|BJ455673 BJ455673 K. Sato unpublished cDNA li... 95 2e-022
gb|AV932210.1|AV932210 AV932210 K. Sato unpublished cDNA li... 78 2e-022
gb|BJ547617.1|BJ547617 BJ547617 K. Sato unpublished cDNA li... 78 2e-022
gb|BJ447930.1|BJ447930 BJ447930 K. Sato unpublished cDNA li... 94 3e-022
gb|CD663301.1|CD663301 UCRHV18_05ac02_b1 Drought-stressed D... 94 3e-022
gb|BF261482.1|BF261482 HV_CEa0001G11f Hordeum vulgare seedl... 62 5e-022
gb|BU970797.1|BU970797 HB15L12r BC Hordeum vulgare subsp. v... 105 6e-022
gb|CA007687.1|CA007687 HU08L11r HU Hordeum vulgare subsp. v... 105 6e-022
gb|CA012694.1|CA012694 HT06C17r HT Hordeum vulgare subsp. v... 73 8e-022
gb|BJ471830.1|BJ471830 BJ471830 K. Sato unpublished cDNA li... 103 2e-021
gb|BG369589.1|BG369589 HVSMEi0025B15f Hordeum vulgare 20 DA... 76 3e-021
gb|BE194110.2|BE194110 HVSMEh0084B07f Hordeum vulgare 5-45 ... 102 4e-021
gb|BF621975.2|BF621975 HVSMEa0001G23f Hordeum vulgare seedl... 96 7e-021
gb|BF254680.2|BF254680 HVSMEf0004L12f Hordeum vulgare seedl... 100 1e-020
>gb|AV916387.1|AV916387 AV916387 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags17a02 5', mRNA sequence
Length = 630
Score = 299 bits (648), Expect = 1e-080
Identities = 120/154 (77%), Positives = 127/154 (82%)
Frame = -3 / +1
Query: 928 DLMKSXXXDXXXFSISXXRIXXDGEXXVNPEGVAYXNNLIXYLLQQGXTPYINLYHYDLP 749
+LMK D FSIS RI DG+ VN EGVAY NNLI YLLQ+G TPYINLYHYDLP
Sbjct: 64 NLMKGLNFDAYRFSISWSRIFPDGDGKVNQEGVAYYNNLINYLLQKGITPYINLYHYDLP 243
Query: 748 LALEKKYGGWLSAKMADLFTDYADFCFKTYGDRVKHWXXFNEPRIVALLGYDTGSNPPQR 569
LALEKKYGGWL+AK LF DYADFCFKT+GDRVKHW FNEPRIVALLGYD GSNPPQR
Sbjct: 244 LALEKKYGGWLNAKTVGLFADYADFCFKTFGDRVKHWFTFNEPRIVALLGYDVGSNPPQR 423
Query: 568 CTRCAAGGNSATEPYIVAHNFLLAHATAVARYRT 467
C++C AGGNSATEPYIVAHNFLLAH AVARYRT
Sbjct: 424 CSKCTAGGNSATEPYIVAHNFLLAHGYAVARYRT 525
Score = 251 bits (543), Expect = 4e-066
Identities = 119/154 (77%), Positives = 123/154 (79%)
Frame = +3 / -2
Query: 465 MVRYLATAVACAKRKL*ATM*GSVAEFPPAAHLVHL*GGFDPVS*PSSATILGSLNXNQC 644
+VRYLATA CAKRKL*ATM*GSVAEFPPA HL+HL*GGFDP S*P SATILGSLN NQC
Sbjct: 527 LVRYLATA*PCAKRKL*ATM*GSVAEFPPAVHLLHL*GGFDPTS*PRSATILGSLNVNQC 348
Query: 645 FTRSP*VLKQKSA*SVNKSAIFALNHPPYFFSSARGRS*W*RLM*GVMPC*SR*XIKLLX 824
FTRSP VLKQKSA*S N +FA N PPYFFSSARGRS*W*RLM*GVMP * R* I+LL
Sbjct: 347 FTRSPKVLKQKSA*SANSPTVFAFNQPPYFFSSARGRS*W*RLM*GVMPF*RR*FIRLL* 168
Query: 825 YATPSGLTXXSPSXXILXXEIENXXXSXXXLFMR 926
YATPS LT SPS IL EIEN S FMR
Sbjct: 167 YATPSWLTFPSPSGKILDHEIENR*ASKFNPFMR 66
Score = 166 bits (357), Expect = 2e-040
Identities = 81/154 (52%), Positives = 94/154 (61%)
Frame = +2 / -1
Query: 467 GTVSCNCSSMCQEKIMSNYVRFGC*IPTSSASGAPLRRI*PCVIAK*RYYPWLIEXXPVL 646
G VSCNC ++C EKI+SN VRF C*+PT SA APLRRI P V+ K R YPW IE PVL
Sbjct: 525 GPVSCNCITVC*EKIVSNNVRFCC*VPTGSAFAAPLRRIRPYVVTKKRNYPWFIECKPVL 346
Query: 647 YAIAVGLKTEVSIVCKQVRHLRA*PPSIFLLXXXXXXXXXXXXXXSXALLKQIXYQIIVI 826
Y IA GLKT+VSIVCK L *P SI LL S A LK++ YQIIVI
Sbjct: 345 YTIAKGLKTKVSIVCK*SHRLCI*PASILLLKCKREIVVVKIDVRSNAFLKKVVYQIIVI 166
Query: 827 RYTFWIDXXFAIXXDPXX*D*EPXXIXXXTFHEI 928
R TF ++ I D *D +P I +FHE+
Sbjct: 165 RDTFLVNFSVTIWEDSGP*DRKPVGIEIQSFHEV 64
Score = 165 bits (354), Expect = 5e-040
Identities = 85/165 (51%), Positives = 93/165 (56%)
Frame = +1 / -3
Query: 466 WYGILQLQ*HVPRENYEQLCKVRLLNSHQQRIWCTFEEDLTLCHSQVALLSLAH*XXTSA 645
W GILQL V REN EQ CKV LL+SH+Q I CTFEED TL +Q A LSL H* TSA
Sbjct: 526 WSGILQLHNRVLRENCEQQCKVLLLSSHRQCICCTFEEDSTLRRNQEAQLSLVH*M*TSA 347
Query: 646 LRDRRRS*NRSQHXXXXXXXXXXXXXXHISSQAQEEDHSGKG*CKEXCLAEADXXSNYCX 825
L DR+RS*N+SQH H SSQ QE D SGK *CKE CL+E S+YC
Sbjct: 346 LHDRQRS*NKSQHSLQIVPPSLHLTSLHTSSQVQEGDRSGKD*CKE*CLSEEGSLSDYCN 167
Query: 826 TLHLLD*XXLRHPXXSXXMRLRTXXHXXXNFS*DRXXPXXDXXDP 960
T HLL * H MR +T H S* P D DP
Sbjct: 166 TRHLLG*LFRHHLGRFWTMR*KTGRHRNSILS*G*HLPCIDGIDP 32
Score = 157 bits (337), Expect = 1e-037
Identities = 91/164 (55%), Positives = 100/164 (60%)
Frame = -1 / +2
Query: 957 IXXIXXXXXXIS*KVXXXMXXGSQSHXXGSXXMAKXXSIQKV*RXTII*XXICFSKAXLL 778
I I S*K M G SH S M +KV R TII* F KA LL
Sbjct: 35 INTIDTRKMLTS*KD*ISMPTGFLSHGPESSQMVTEKLTKKVSRITII**TTFFRKALLL 214
Query: 777 TSTFTTMIFLLRLRRNMEGG*ARRWRTCLQTMLTSVLRPTAIA*STGXXSMSQG**RYLA 598
TS FTT I LL LRR+ME G* +R LQTMLT VLRP AI *STG SM+QG* R+L
Sbjct: 215 TSIFTTTISLLHLRRSMEAG*MQRRWDYLQTMLTFVLRPLAIV*STGLHSMNQG*LRFLV 394
Query: 597 MTQGQILLKGAPDALLVGIQQPNLT*LLIIFSWHMLLQLQDTVP 466
T G+ILLKGA +AL VG QQ NLT LL IFS H ++QLQDT P
Sbjct: 395 TT*GRILLKGAANALPVGTQQQNLTLLLTIFS*HTVMQLQDTGP 526
Score = 100 bits (212), Expect(2) = 5e-030
Identities = 43/59 (72%), Positives = 45/59 (76%)
Frame = -2 / +3
Query: 647 KALVXIQ*AKDSSATWL*HRVKSSSKVHQMRCWWEFSNRTLHSCS*FSLGTCYCSCKIP 471
KALV IQ* KDS A+WL RV+SSSKV QM C WE SNRTLH CS FSL T CSCKIP
Sbjct: 345 KALVYIQ*TKDSCASWLRRRVESSSKVQQMHCRWELSNRTLHCCSQFSLSTRLCSCKIP 521
Score = 51.5 bits (106), Expect(2) = 5e-030
Identities = 31/89 (34%), Positives = 38/89 (42%)
Frame = -2 / +3
Query: 959 GSXXSXXGXXRSHEKXXX*XXXVLNLXXXDXXGWRXXXQSRRCSVXQ*FDXLSASARXXX 780
GS S G HE+ V L + W RRC V Q* D L +S R
Sbjct: 33 GSIPSIQGRC*PHERIEFRCLPVFYLMVQNLPRW*RKS*PRRCRVLQ*SDKLPSSERHYS 212
Query: 779 XXXXXXXXXXSCA*EEIWRVVKREDGGLV 693
SC *EE+WR+VK +DGG +
Sbjct: 213 LHQSLPLRSPSCT*EEVWRLVKCKDGGTI 299
>gb|BJ462621.1|BJ462621 BJ462621 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags29i09 5', mRNA sequence
Length = 608
Score = 299 bits (648), Expect = 1e-080
Identities = 120/154 (77%), Positives = 127/154 (82%)
Frame = -3 / +2
Query: 928 DLMKSXXXDXXXFSISXXRIXXDGEXXVNPEGVAYXNNLIXYLLQQGXTPYINLYHYDLP 749
+LMK D FSIS RI DG+ VN EGVAY NNLI YLLQ+G TPYINLYHYDLP
Sbjct: 47 NLMKGLNFDAYRFSISWSRIFPDGDGKVNQEGVAYYNNLINYLLQKGITPYINLYHYDLP 226
Query: 748 LALEKKYGGWLSAKMADLFTDYADFCFKTYGDRVKHWXXFNEPRIVALLGYDTGSNPPQR 569
LALEKKYGGWL+AK LF DYADFCFKT+GDRVKHW FNEPRIVALLGYD GSNPPQR
Sbjct: 227 LALEKKYGGWLNAKTVGLFADYADFCFKTFGDRVKHWFTFNEPRIVALLGYDVGSNPPQR 406
Query: 568 CTRCAAGGNSATEPYIVAHNFLLAHATAVARYRT 467
C++C AGGNSATEPYIVAHNFLLAH AVARYRT
Sbjct: 407 CSKCTAGGNSATEPYIVAHNFLLAHGYAVARYRT 508
Score = 251 bits (543), Expect = 4e-066
Identities = 119/154 (77%), Positives = 123/154 (79%)
Frame = +3 / -3
Query: 465 MVRYLATAVACAKRKL*ATM*GSVAEFPPAAHLVHL*GGFDPVS*PSSATILGSLNXNQC 644
+VRYLATA CAKRKL*ATM*GSVAEFPPA HL+HL*GGFDP S*P SATILGSLN NQC
Sbjct: 510 LVRYLATA*PCAKRKL*ATM*GSVAEFPPAVHLLHL*GGFDPTS*PRSATILGSLNVNQC 331
Query: 645 FTRSP*VLKQKSA*SVNKSAIFALNHPPYFFSSARGRS*W*RLM*GVMPC*SR*XIKLLX 824
FTRSP VLKQKSA*S N +FA N PPYFFSSARGRS*W*RLM*GVMP * R* I+LL
Sbjct: 330 FTRSPKVLKQKSA*SANSPTVFAFNQPPYFFSSARGRS*W*RLM*GVMPF*RR*FIRLL* 151
Query: 825 YATPSGLTXXSPSXXILXXEIENXXXSXXXLFMR 926
YATPS LT SPS IL EIEN S FMR
Sbjct: 150 YATPSWLTFPSPSGKILDHEIENR*ASKFNPFMR 49
Score = 166 bits (357), Expect = 2e-040
Identities = 81/154 (52%), Positives = 94/154 (61%)
Frame = +2 / -2
Query: 467 GTVSCNCSSMCQEKIMSNYVRFGC*IPTSSASGAPLRRI*PCVIAK*RYYPWLIEXXPVL 646
G VSCNC ++C EKI+SN VRF C*+PT SA APLRRI P V+ K R YPW IE PVL
Sbjct: 508 GPVSCNCITVC*EKIVSNNVRFCC*VPTGSAFAAPLRRIRPYVVTKKRNYPWFIECKPVL 329
Query: 647 YAIAVGLKTEVSIVCKQVRHLRA*PPSIFLLXXXXXXXXXXXXXXSXALLKQIXYQIIVI 826
Y IA GLKT+VSIVCK L *P SI LL S A LK++ YQIIVI
Sbjct: 328 YTIAKGLKTKVSIVCK*SHRLCI*PASILLLKCKREIVVVKIDVRSNAFLKKVVYQIIVI 149
Query: 827 RYTFWIDXXFAIXXDPXX*D*EPXXIXXXTFHEI 928
R TF ++ I D *D +P I +FHE+
Sbjct: 148 RDTFLVNFSVTIWEDSGP*DRKPVGIEIQSFHEV 47
Score = 165 bits (354), Expect = 5e-040
Identities = 85/165 (51%), Positives = 93/165 (56%)
Frame = +1 / -1
Query: 466 WYGILQLQ*HVPRENYEQLCKVRLLNSHQQRIWCTFEEDLTLCHSQVALLSLAH*XXTSA 645
W GILQL V REN EQ CKV LL+SH+Q I CTFEED TL +Q A LSL H* TSA
Sbjct: 509 WSGILQLHNRVLRENCEQQCKVLLLSSHRQCICCTFEEDSTLRRNQEAQLSLVH*M*TSA 330
Query: 646 LRDRRRS*NRSQHXXXXXXXXXXXXXXHISSQAQEEDHSGKG*CKEXCLAEADXXSNYCX 825
L DR+RS*N+SQH H SSQ QE D SGK *CKE CL+E S+YC
Sbjct: 329 LHDRQRS*NKSQHSLQIVPPSLHLTSLHTSSQVQEGDRSGKD*CKE*CLSEEGSLSDYCN 150
Query: 826 TLHLLD*XXLRHPXXSXXMRLRTXXHXXXNFS*DRXXPXXDXXDP 960
T HLL * H MR +T H S* P D DP
Sbjct: 149 TRHLLG*LFRHHLGRFWTMR*KTGRHRNSILS*G*HLPCIDGIDP 15
Score = 157 bits (337), Expect = 1e-037
Identities = 91/164 (55%), Positives = 100/164 (60%)
Frame = -1 / +3
Query: 957 IXXIXXXXXXIS*KVXXXMXXGSQSHXXGSXXMAKXXSIQKV*RXTII*XXICFSKAXLL 778
I I S*K M G SH S M +KV R TII* F KA LL
Sbjct: 18 INTIDTRKMLTS*KD*ISMPTGFLSHGPESSQMVTEKLTKKVSRITII**TTFFRKALLL 197
Query: 777 TSTFTTMIFLLRLRRNMEGG*ARRWRTCLQTMLTSVLRPTAIA*STGXXSMSQG**RYLA 598
TS FTT I LL LRR+ME G* +R LQTMLT VLRP AI *STG SM+QG* R+L
Sbjct: 198 TSIFTTTISLLHLRRSMEAG*MQRRWDYLQTMLTFVLRPLAIV*STGLHSMNQG*LRFLV 377
Query: 597 MTQGQILLKGAPDALLVGIQQPNLT*LLIIFSWHMLLQLQDTVP 466
T G+ILLKGA +AL VG QQ NLT LL IFS H ++QLQDT P
Sbjct: 378 TT*GRILLKGAANALPVGTQQQNLTLLLTIFS*HTVMQLQDTGP 509
Score = 100 bits (212), Expect(2) = 5e-030
Identities = 43/59 (72%), Positives = 45/59 (76%)
Frame = -2 / +1
Query: 647 KALVXIQ*AKDSSATWL*HRVKSSSKVHQMRCWWEFSNRTLHSCS*FSLGTCYCSCKIP 471
KALV IQ* KDS A+WL RV+SSSKV QM C WE SNRTLH CS FSL T CSCKIP
Sbjct: 328 KALVYIQ*TKDSCASWLRRRVESSSKVQQMHCRWELSNRTLHCCSQFSLSTRLCSCKIP 504
Score = 51.5 bits (106), Expect(2) = 5e-030
Identities = 31/89 (34%), Positives = 38/89 (42%)
Frame = -2 / +1
Query: 959 GSXXSXXGXXRSHEKXXX*XXXVLNLXXXDXXGWRXXXQSRRCSVXQ*FDXLSASARXXX 780
GS S G HE+ V L + W RRC V Q* D L +S R
Sbjct: 16 GSIPSIQGRC*PHERIEFRCLPVFYLMVQNLPRW*RKS*PRRCRVLQ*SDKLPSSERHYS 195
Query: 779 XXXXXXXXXXSCA*EEIWRVVKREDGGLV 693
SC *EE+WR+VK +DGG +
Sbjct: 196 LHQSLPLRSPSCT*EEVWRLVKCKDGGTI 282
>gb|CK122337.1|CK122337 BES1824102p02 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010P022 5-PRIME, mRNA sequence
Length = 750
Score = 297 bits (643), Expect = 7e-080
Identities = 119/153 (77%), Positives = 126/153 (82%)
Frame = -3 / +1
Query: 928 DLMKSXXXDXXXFSISXXRIXXDGEXXVNPEGVAYXNNLIXYLLQQGXTPYINLYHYDLP 749
+LMK D FSIS RI DG+ VN EGVAY NNLI YLLQ+G TPYINLYHYDLP
Sbjct: 130 NLMKGLNFDAYRFSISWSRIFPDGDGKVNQEGVAYYNNLINYLLQKGITPYINLYHYDLP 309
Query: 748 LALEKKYGGWLSAKMADLFTDYADFCFKTYGDRVKHWXXFNEPRIVALLGYDTGSNPPQR 569
LALEKKYGGWL+AK LF DYADFCFKT+GDRVKHW FNEPRIVALLGYD GSNPPQR
Sbjct: 310 LALEKKYGGWLNAKTVGLFADYADFCFKTFGDRVKHWFTFNEPRIVALLGYDVGSNPPQR 489
Query: 568 CTRCAAGGNSATEPYIVAHNFLLAHATAVARYR 470
C++C AGGNSATEPYIVAHNFLLAH AVARYR
Sbjct: 490 CSKCTAGGNSATEPYIVAHNFLLAHGYAVARYR 588
Score = 248 bits (537), Expect = 3e-065
Identities = 118/152 (77%), Positives = 121/152 (79%)
Frame = +3 / -2
Query: 471 RYLATAVACAKRKL*ATM*GSVAEFPPAAHLVHL*GGFDPVS*PSSATILGSLNXNQCFT 650
RYLATA CAKRKL*ATM*GSVAEFPPA HL+HL*GGFDP S*P SATILGSLN NQCFT
Sbjct: 587 RYLATA*PCAKRKL*ATM*GSVAEFPPAVHLLHL*GGFDPTS*PRSATILGSLNVNQCFT 408
Query: 651 RSP*VLKQKSA*SVNKSAIFALNHPPYFFSSARGRS*W*RLM*GVMPC*SR*XIKLLXYA 830
RSP VLKQKSA*S N +FA N PPYFFSSARGRS*W*RLM*GVMP * R* I+LL YA
Sbjct: 407 RSPKVLKQKSA*SANSPTVFAFNQPPYFFSSARGRS*W*RLM*GVMPF*RR*FIRLL*YA 228
Query: 831 TPSGLTXXSPSXXILXXEIENXXXSXXXLFMR 926
TPS LT SPS IL EIEN S FMR
Sbjct: 227 TPSWLTFPSPSGKILDHEIENR*ASKFNPFMR 132
Score = 163 bits (351), Expect = 1e-039
Identities = 79/152 (51%), Positives = 93/152 (61%)
Frame = +2 / -1
Query: 473 VSCNCSSMCQEKIMSNYVRFGC*IPTSSASGAPLRRI*PCVIAK*RYYPWLIEXXPVLYA 652
VSCNC ++C EKI+SN VRF C*+PT SA APLRRI P ++ K R YPW IE PVLY
Sbjct: 585 VSCNCITVC*EKIVSNNVRFCC*VPTGSAFAAPLRRIRPYIVTKKRNYPWFIECKPVLYT 406
Query: 653 IAVGLKTEVSIVCKQVRHLRA*PPSIFLLXXXXXXXXXXXXXXSXALLKQIXYQIIVIRY 832
IA GLKT+VSIVCK L *P SI LL S A LK++ YQIIVIR
Sbjct: 405 IAKGLKTKVSIVCK*SHRLCI*PASILLLKCKREIVVVKIDVRSNAFLKKVVYQIIVIRD 226
Query: 833 TFWIDXXFAIXXDPXX*D*EPXXIXXXTFHEI 928
TF ++ I D *D +P I +FHE+
Sbjct: 225 TFLVNFSVTIWEDSGP*DRKPVGIEIQSFHEV 130
Score = 160 bits (345), Expect = 8e-039
Identities = 84/163 (51%), Positives = 92/163 (56%)
Frame = +1 / -3
Query: 472 GILQLQ*HVPRENYEQLCKVRLLNSHQQRIWCTFEEDLTLCHSQVALLSLAH*XXTSALR 651
GILQL V REN EQ CKV LL+SH+Q I CTFEED TL +Q A LSL H* TSAL
Sbjct: 586 GILQLHNRVLRENCEQQCKVLLLSSHRQCICCTFEEDSTLHRNQEAQLSLVH*M*TSALH 407
Query: 652 DRRRS*NRSQHXXXXXXXXXXXXXXHISSQAQEEDHSGKG*CKEXCLAEADXXSNYCXTL 831
DR+RS*N+SQH H SSQ QE D SGK *CKE CL+E S+YC T
Sbjct: 406 DRQRS*NKSQHSLQIVPPSLHLTSLHTSSQVQEGDRSGKD*CKE*CLSEEGSLSDYCNTR 227
Query: 832 HLLD*XXLRHPXXSXXMRLRTXXHXXXNFS*DRXXPXXDXXDP 960
HLL * H MR +T H S* P D DP
Sbjct: 226 HLLG*LFRHHLGRFWTMR*KTGRHRNSILS*G*HLPCIDGIDP 98
Score = 152 bits (327), Expect = 3e-036
Identities = 89/162 (54%), Positives = 98/162 (60%)
Frame = -1 / +2
Query: 957 IXXIXXXXXXIS*KVXXXMXXGSQSHXXGSXXMAKXXSIQKV*RXTII*XXICFSKAXLL 778
I I S*K M G SH S M +KV R TII* F KA LL
Sbjct: 101 INTIDTRKMLTS*KD*ISMPTGFLSHGPESSQMVTEKLTKKVSRITII**TTFFRKALLL 280
Query: 777 TSTFTTMIFLLRLRRNMEGG*ARRWRTCLQTMLTSVLRPTAIA*STGXXSMSQG**RYLA 598
TS FTT I LL LRR+ME G* +R LQTMLT VLRP AI *STG SM+QG* R+L
Sbjct: 281 TSIFTTTISLLHLRRSMEAG*MQRRWDYLQTMLTFVLRPLAIV*STGLHSMNQG*LRFLV 460
Query: 597 MTQGQILLKGAPDALLVGIQQPNLT*LLIIFSWHMLLQLQDT 472
G+ILLKGA +AL VG QQ NLT LL IFS H ++QLQDT
Sbjct: 461 TM*GRILLKGAANALPVGTQQQNLTLLLTIFS*HTVMQLQDT 586
Score = 100 bits (212), Expect(2) = 5e-030
Identities = 45/65 (69%), Positives = 47/65 (72%)
Frame = -2 / +3
Query: 647 KALVXIQ*AKDSSATWL*HRVKSSSKVHQMRCWWEFSNRTLHSCS*FSLGTCYCSCKIPY 468
KALV IQ* KDS A+WL RV+SSSKV QM C WE SNRTLH CS FSL T CSCKIP
Sbjct: 411 KALVYIQ*TKDSCASWLRCRVESSSKVQQMHCRWELSNRTLHCCSQFSLSTRLCSCKIPG 590
Query: 467 HSYHQ 453
S Q
Sbjct: 591 PSIRQ 605
Score = 51.5 bits (106), Expect(2) = 5e-030
Identities = 31/89 (34%), Positives = 38/89 (42%)
Frame = -2 / +3
Query: 959 GSXXSXXGXXRSHEKXXX*XXXVLNLXXXDXXGWRXXXQSRRCSVXQ*FDXLSASARXXX 780
GS S G HE+ V L + W RRC V Q* D L +S R
Sbjct: 99 GSIPSIQGRC*PHERIEFRCLPVFYLMVQNLPRW*RKS*PRRCRVLQ*SDKLPSSERHYS 278
Query: 779 XXXXXXXXXXSCA*EEIWRVVKREDGGLV 693
SC *EE+WR+VK +DGG +
Sbjct: 279 LHQSLPLRSPSCT*EEVWRLVKCKDGGTI 365
>gb|AV916990.1|AV916990 AV916990 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags20f24 5', mRNA sequence
Length = 497
Score = 285 bits (616), Expect = 3e-076
Identities = 113/145 (77%), Positives = 120/145 (82%)
Frame = -3 / +2
Query: 928 DLMKSXXXDXXXFSISXXRIXXDGEXXVNPEGVAYXNNLIXYLLQQGXTPYINLYHYDLP 749
+LMK D FSIS RI DG+ VN EGVAY NNLI YLLQ+G TPYINLYHYDLP
Sbjct: 62 NLMKGLNFDAYRFSISWSRIFPDGDGKVNQEGVAYYNNLINYLLQKGITPYINLYHYDLP 241
Query: 748 LALEKKYGGWLSAKMADLFTDYADFCFKTYGDRVKHWXXFNEPRIVALLGYDTGSNPPQR 569
LALEKKYGGWL+AK LF DYADFCFKT+GDRVKHW FNEPRIVALLGYD GSNPPQR
Sbjct: 242 LALEKKYGGWLNAKTVGLFADYADFCFKTFGDRVKHWFTFNEPRIVALLGYDVGSNPPQR 421
Query: 568 CTRCAAGGNSATEPYIVAHNFLLAH 494
C++C AGGNSATEPYIVAHNFLLAH
Sbjct: 422 CSKCTAGGNSATEPYIVAHNFLLAH 496
Score = 237 bits (513), Expect = 6e-062
Identities = 112/144 (77%), Positives = 115/144 (79%)
Frame = +3 / -3
Query: 495 CAKRKL*ATM*GSVAEFPPAAHLVHL*GGFDPVS*PSSATILGSLNXNQCFTRSP*VLKQ 674
CAKRKL*ATM*GSVAEFPPA HL+HL*GGFDP S*P SATILGSLN NQCFTRSP VLKQ
Sbjct: 495 CAKRKL*ATM*GSVAEFPPAVHLLHL*GGFDPTS*PRSATILGSLNVNQCFTRSPKVLKQ 316
Query: 675 KSA*SVNKSAIFALNHPPYFFSSARGRS*W*RLM*GVMPC*SR*XIKLLXYATPSGLTXX 854
KSA*S N +FA N PPYFFSSARGRS*W*RLM*GVMP * R* I+LL YATPS LT
Sbjct: 315 KSA*SANSPTVFAFNQPPYFFSSARGRS*W*RLM*GVMPF*RR*FIRLL*YATPSWLTFP 136
Query: 855 SPSXXILXXEIENXXXSXXXLFMR 926
SPS IL EIEN S FMR
Sbjct: 135 SPSGKILDHEIENR*ASKFNPFMR 64
Score = 152 bits (326), Expect = 3e-036
Identities = 79/155 (50%), Positives = 87/155 (56%)
Frame = +1 / -1
Query: 496 VPRENYEQLCKVRLLNSHQQRIWCTFEEDLTLCHSQVALLSLAH*XXTSALRDRRRS*NR 675
V REN EQ CKV LL+SH+Q I CTFEED TL +Q A LSL H* TSAL DR+RS*N+
Sbjct: 494 VLRENCEQQCKVLLLSSHRQCICCTFEEDSTLRRNQEAQLSLVH*M*TSALHDRQRS*NK 315
Query: 676 SQHXXXXXXXXXXXXXXHISSQAQEEDHSGKG*CKEXCLAEADXXSNYCXTLHLLD*XXL 855
SQH H SSQ QE D SGK *CKE CL+E S+YC T HLL *
Sbjct: 314 SQHSLQIVPPSLHLTSLHTSSQVQEGDRSGKD*CKE*CLSEEGSLSDYCNTRHLLG*LFR 135
Query: 856 RHPXXSXXMRLRTXXHXXXNFS*DRXXPXXDXXDP 960
H MR +T H S* P D DP
Sbjct: 134 HHLGRFWTMR*KTGRHRNSILS*G*HLPCIDGIDP 30
Score = 149 bits (321), Expect = 2e-035
Identities = 75/145 (51%), Positives = 87/145 (60%)
Frame = +2 / -2
Query: 494 MCQEKIMSNYVRFGC*IPTSSASGAPLRRI*PCVIAK*RYYPWLIEXXPVLYAIAVGLKT 673
+C EKI+SN VRF C*+PT SA APLRRI P V+ K R YPW IE PVLY IA GLKT
Sbjct: 496 VC*EKIVSNNVRFCC*VPTGSAFAAPLRRIRPYVVTKKRNYPWFIECKPVLYTIAKGLKT 317
Query: 674 EVSIVCKQVRHLRA*PPSIFLLXXXXXXXXXXXXXXSXALLKQIXYQIIVIRYTFWIDXX 853
+VSIVCK L *P SI LL S A LK++ YQIIVIR TF ++
Sbjct: 316 KVSIVCK*SHRLCI*PASILLLKCKREIVVVKIDVRSNAFLKKVVYQIIVIRDTFLVNFS 137
Query: 854 FAIXXDPXX*D*EPXXIXXXTFHEI 928
I D *D +P I +FHE+
Sbjct: 136 VTIWEDSGP*DRKPVGIEIQSFHEV 62
Score = 143 bits (306), Expect = 2e-033
Identities = 85/154 (55%), Positives = 92/154 (59%)
Frame = -1 / +3
Query: 957 IXXIXXXXXXIS*KVXXXMXXGSQSHXXGSXXMAKXXSIQKV*RXTII*XXICFSKAXLL 778
I I S*K M G SH S M +KV R TII* F KA LL
Sbjct: 33 INTIDTRKMLTS*KD*ISMPTGFLSHGPESSQMVTEKLTKKVSRITII**TTFFRKALLL 212
Query: 777 TSTFTTMIFLLRLRRNMEGG*ARRWRTCLQTMLTSVLRPTAIA*STGXXSMSQG**RYLA 598
TS FTT I LL LRR+ME G* +R LQTMLT VLRP AI *STG SM+QG* R+L
Sbjct: 213 TSIFTTTISLLHLRRSMEAG*MQRRWDYLQTMLTFVLRPLAIV*STGLHSMNQG*LRFLV 392
Query: 597 MTQGQILLKGAPDALLVGIQQPNLT*LLIIFSWH 496
T G+ILLKGA +AL VG QQ NLT LL IFS H
Sbjct: 393 TT*GRILLKGAANALPVGTQQQNLTLLLTIFS*H 494
Score = 84.5 bits (178), Expect(2) = 2e-025
Identities = 37/51 (72%), Positives = 39/51 (76%)
Frame = -2 / +1
Query: 647 KALVXIQ*AKDSSATWL*HRVKSSSKVHQMRCWWEFSNRTLHSCS*FSLGT 495
KALV IQ* KDS A+WL RV+SSSKV QM C WE SNRTLH CS FSL T
Sbjct: 343 KALVYIQ*TKDSCASWLRRRVESSSKVQQMHCRWELSNRTLHCCSQFSLST 495
Score = 51.5 bits (106), Expect(2) = 2e-025
Identities = 31/89 (34%), Positives = 38/89 (42%)
Frame = -2 / +1
Query: 959 GSXXSXXGXXRSHEKXXX*XXXVLNLXXXDXXGWRXXXQSRRCSVXQ*FDXLSASARXXX 780
GS S G HE+ V L + W RRC V Q* D L +S R
Sbjct: 31 GSIPSIQGRC*PHERIEFRCLPVFYLMVQNLPRW*RKS*PRRCRVLQ*SDKLPSSERHYS 210
Query: 779 XXXXXXXXXXSCA*EEIWRVVKREDGGLV 693
SC *EE+WR+VK +DGG +
Sbjct: 211 LHQSLPLRSPSCT*EEVWRLVKCKDGGTI 297
>gb|BU988606.1|BU988606 HF18C11r HF Hordeum vulgare subsp. vulgare cDNA clone HF18C11
5-PRIME, mRNA sequence
Length = 636
Score = 243 bits (525), Expect(2) = 1e-074
Identities = 93/109 (85%), Positives = 98/109 (89%)
Frame = -3 / +1
Query: 793 QGXTPYINLYHYDLPLALEKKYGGWLSAKMADLFTDYADFCFKTYGDRVKHWXXFNEPRI 614
+G TPYINLYHYDLPLALEKKYGGWL+AK LF DYADFCFKT+GDRVKHW FNEPRI
Sbjct: 142 KGITPYINLYHYDLPLALEKKYGGWLNAKTVGLFADYADFCFKTFGDRVKHWFTFNEPRI 321
Query: 613 VALLGYDTGSNPPQRCTRCAAGGNSATEPYIVAHNFLLAHATAVARYRT 467
VALLGYD GSNPPQRC++C AGGNSATEPYIVAHNFLLAH AVARYRT
Sbjct: 322 VALLGYDVGSNPPQRCSKCTAGGNSATEPYIVAHNFLLAHGYAVARYRT 468
Score = 209 bits (451), Expect(2) = 2e-060
Identities = 93/109 (85%), Positives = 96/109 (88%)
Frame = +3 / -2
Query: 465 MVRYLATAVACAKRKL*ATM*GSVAEFPPAAHLVHL*GGFDPVS*PSSATILGSLNXNQC 644
+VRYLATA CAKRKL*ATM*GSVAEFPPA HL+HL*GGFDP S*P SATILGSLN NQC
Sbjct: 470 LVRYLATA*PCAKRKL*ATM*GSVAEFPPAVHLLHL*GGFDPTS*PRSATILGSLNVNQC 291
Query: 645 FTRSP*VLKQKSA*SVNKSAIFALNHPPYFFSSARGRS*W*RLM*GVMP 791
FTRSP VLKQKSA*S N +FA N PPYFFSSARGRS*W*RLM*GVMP
Sbjct: 290 FTRSPKVLKQKSA*SANSPTVFAFNQPPYFFSSARGRS*W*RLM*GVMP 144
Score = 136 bits (292), Expect = 2e-031
Identities = 71/109 (65%), Positives = 79/109 (72%)
Frame = -1 / +2
Query: 792 KAXLLTSTFTTMIFLLRLRRNMEGG*ARRWRTCLQTMLTSVLRPTAIA*STGXXSMSQG* 613
KA LLTS FTT I LL LRR+ME G* +R LQTMLT VLRP AI *STG SM+QG*
Sbjct: 143 KALLLTSIFTTTISLLHLRRSMEAG*MQRRWDYLQTMLTFVLRPLAIV*STGLHSMNQG* 322
Query: 612 *RYLAMTQGQILLKGAPDALLVGIQQPNLT*LLIIFSWHMLLQLQDTVP 466
R+L G+ILLKGA +AL VG QQ NLT LL IFS H ++QLQDT P
Sbjct: 323 LRFLVTM*GRILLKGAANALPVGTQQQNLTLLLTIFS*HTVMQLQDTGP 469
Score = 133 bits (286), Expect(2) = 4e-037
Identities = 65/111 (58%), Positives = 72/111 (64%)
Frame = +1 / -3
Query: 466 WYGILQLQ*HVPRENYEQLCKVRLLNSHQQRIWCTFEEDLTLCHSQVALLSLAH*XXTSA 645
W GILQL V REN EQ CKV LL+SH+Q I CTFEED TL +Q A LSL H* TSA
Sbjct: 469 WSGILQLHNRVLRENCEQQCKVLLLSSHRQCICCTFEEDSTLHRNQEAQLSLVH*M*TSA 290
Query: 646 LRDRRRS*NRSQHXXXXXXXXXXXXXXHISSQAQEEDHSGKG*CKEXCLAE 798
L DR+RS*N+SQH H SSQ QE D SGK *CKE CL++
Sbjct: 289 LHDRQRS*NKSQHSLQIVPPSLHLTSLHTSSQVQEGDRSGKD*CKE*CLSK 137
Score = 128 bits (275), Expect(2) = 2e-031
Identities = 58/91 (63%), Positives = 65/91 (71%)
Frame = +2 / -1
Query: 467 GTVSCNCSSMCQEKIMSNYVRFGC*IPTSSASGAPLRRI*PCVIAK*RYYPWLIEXXPVL 646
G VSCNC ++C EKI+SN VRF C*+PT SA APLRRI P ++ K R YPW IE PVL
Sbjct: 468 GPVSCNCITVC*EKIVSNNVRFCC*VPTGSAFAAPLRRIRPYIVTKKRNYPWFIECKPVL 289
Query: 647 YAIAVGLKTEVSIVCKQVRHLRA*PPSIFLL 739
Y IA GLKT+VSIVCK L *P SI LL
Sbjct: 288 YTIAKGLKTKVSIVCK*SHRLCI*PASILLL 196
Score = 98.7 bits (209), Expect(2) = 3e-024
Identities = 43/59 (72%), Positives = 45/59 (76%)
Frame = -2 / +3
Query: 647 KALVXIQ*AKDSSATWL*HRVKSSSKVHQMRCWWEFSNRTLHSCS*FSLGTCYCSCKIP 471
KALV IQ* KDS A+WL RV+SSSKV QM C WE SNRTLH CS FSL T CSCKIP
Sbjct: 288 KALVYIQ*TKDSCASWLRCRVESSSKVQQMHCRWELSNRTLHCCSQFSLSTRLCSCKIP 464
Score = 57.4 bits (119), Expect(2) = 1e-074
Identities = 26/45 (57%), Positives = 29/45 (64%)
Frame = -3 / +2
Query: 925 LMKSXXXDXXXFSISXXRIXXDGEXXVNPEGVAYXNNLIXYLLQQ 791
LMK D FSIS RI DG+ VN EGVAY NNLI YLL++
Sbjct: 11 LMKGLNFDAYRFSISWSRIFPDGDGKVNQEGVAYYNNLINYLLRK 145
Score = 43.7 bits (89), Expect(2) = 2e-060
Identities = 24/41 (58%), Positives = 25/41 (60%)
Frame = +3 / -1
Query: 801 R*XIKLLXYATPSGLTXXSPSXXILXXEIENXXXSXXXLFM 923
R* I+LL YATPS LT SPS IL EIEN S FM
Sbjct: 135 R*FIRLL*YATPSWLTFPSPSGKILDHEIENR*ASKFNPFM 13
Score = 41.4 bits (84), Expect(2) = 4e-037
Identities = 20/45 (44%), Positives = 26/45 (57%)
Frame = +2 / -3
Query: 791 LLKQIXYQIIVIRYTFWIDXXFAIXXDPXX*D*EPXXIXXXTFHE 925
L K++ YQIIVIR TF ++ I D *D +P I +FHE
Sbjct: 145 LSKKVVYQIIVIRDTFLVNFSVTIWEDSGP*DRKPVGIEIQSFHE 11
Score = 33.6 bits (67), Expect(2) = 3e-024
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = -2 / +3
Query: 746 CA*EEIWRVVKREDGGLV 693
C *EE+WR+VK +DGG +
Sbjct: 189 CT*EEVWRLVKCKDGGTI 242
Score = 27.2 bits (53), Expect(2) = 2e-031
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = +1 / -2
Query: 811 SNYCXTLHLLD*XXLRHPXXSXXMRLRTXXH 903
S+YC T HLL * H MR +T H
Sbjct: 125 SDYCNTRHLLG*LFRHHLGRFWTMR*KTGRH 33
>gb|BU978697.1|BU978697 HA14A09r HA Hordeum vulgare subsp. vulgare cDNA clone HA14A09
5-PRIME, mRNA sequence
Length = 637
Score = 273 bits (591), Expect = 1e-072
Identities = 106/153 (69%), Positives = 123/153 (80%)
Frame = -3 / +3
Query: 928 DLMKSXXXDXXXFSISXXRIXXDGEXXVNPEGVAYXNNLIXYLLQQGXTPYINLYHYDLP 749
DL+KS D FSIS RI DGE VN EGV Y NNLI Y+++QG TPY+NL HYD+P
Sbjct: 81 DLLKSLNFDAYRFSISWSRIFPDGEGKVNKEGVTYYNNLIDYVIKQGLTPYVNLNHYDIP 260
Query: 748 LALEKKYGGWLSAKMADLFTDYADFCFKTYGDRVKHWXXFNEPRIVALLGYDTGSNPPQR 569
LAL+KKY G+LS K+ ++F DYA+FCFKTYGDR+K+W FNEPRIVA LG+DTG+NPP R
Sbjct: 261 LALQKKYDGFLSPKIVNIFADYAEFCFKTYGDRIKNWFTFNEPRIVAALGFDTGTNPPNR 440
Query: 568 CTRCAAGGNSATEPYIVAHNFLLAHATAVARYR 470
CT+CAAGGNSATEPY V HN LL HATAVARYR
Sbjct: 441 CTKCAAGGNSATEPYTVVHNILLCHATAVARYR 539
Score = 204 bits (440), Expect = 7e-052
Identities = 104/155 (67%), Positives = 109/155 (70%)
Frame = +3 / -1
Query: 465 MVRYLATAVACAKRKL*ATM*GSVAEFPPAAHLVHL*GGFDPVS*PSSATILGSLNXNQC 644
++RYLATAVA KR L T+*GSVAEFPPAAHLVHL GGF PVS PS+ATILGSLN NQ
Sbjct: 544 LLRYLATAVA*HKRMLWTTV*GSVAEFPPAAHLVHLLGGFVPVSKPSAATILGSLNVNQF 365
Query: 645 FTRSP*VLKQKSA*SVNKSAIFALNHPPYFFSSARGRS*W*RLM*GVMPC*SR*XIKLLX 824
RSP*VLKQ SA*S N IF L P YFF SARG S*W RL *GV PC * I+LL
Sbjct: 364 LIRSP*VLKQNSA*SANMFTIFGLKKPSYFF*SARGIS*WLRLT*GVSPCLMT*SIRLL* 185
Query: 825 YATPSGLTXXSPSXXILXXEIENXXXSXXXLFMRS 929
Y TPS LT SPS IL EIEN S LF RS
Sbjct: 184 YVTPSLLTFPSPSGKILDHEIENRYASKFRLFRRS 80
Score = 144 bits (309), Expect = 8e-034
Identities = 72/152 (47%), Positives = 88/152 (57%)
Frame = +2 / -3
Query: 473 VSCNCSSMCQEKIMSNYVRFGC*IPTSSASGAPLRRI*PCVIAK*RYYPWLIEXXPVLYA 652
VS NCSSM E +M N VR C*+PT SA GAP+R + + AK YYPWLIE PVL +
Sbjct: 536 VSRNCSSMT*ENVMDNSVRLCC*VPTGSAFGAPVRGVRSSIKAKCCYYPWLIECEPVLNS 357
Query: 653 IAVGLKTEVSIVCKQVRHLRA*PPSIFLLXXXXXXXXXXXXXXSXALLKQIXYQIIVIRY 832
IA+ L+T+ SIVCK V L A* I LL S LL + YQI+VIR+
Sbjct: 356 IAISLETKFSIVCKYVHDLWA*EAIILLLKCKRDIIVVEIDIRSEPLLNDVVYQIVVIRH 177
Query: 833 TFWIDXXFAIXXDPXX*D*EPXXIXXXTFHEI 928
TF++D I DP *D*+P + F EI
Sbjct: 176 TFFVDFPLPIWEDPGP*D*KPIRVEIQAFQEI 81
Score = 134 bits (287), Expect = 8e-031
Identities = 80/152 (52%), Positives = 92/152 (60%)
Frame = -1 / +1
Query: 927 IS*KVXXXMXXGSQSHXXGSXXMAKXXSIQKV*RXTII*XXICFSKAXLLTSTFTTMIFL 748
IS*K G QSH GS M + S +KV*R T I* SK LL S TTMI L
Sbjct: 82 IS*KA*ISTRIGFQSHGPGSSQMGRGKSTKKV*RITTI**TTSLSKGSLLMSISTTMISL 261
Query: 747 LRLRRNMEGG*ARRWRTCLQTMLTSVLRPTAIA*STGXXSMSQG**RYLAMTQGQILLKG 568
L RR+M *A+R T LQTML V R AI TG SMSQG**++LA+ + L G
Sbjct: 262 LHFRRSMMAS*AQRS*TYLQTMLNFVSRLMAIELRTGSHSMSQG**QHLALILERTPLTG 441
Query: 567 APDALLVGIQQPNLT*LLIIFSWHMLLQLQDT 472
AP+AL VG QQ +LT L I FS+ MLLQL+DT
Sbjct: 442 APNALPVGTQQQSLTLLSITFSYVMLLQLRDT 537
Score = 81.7 bits (172), Expect(2) = 2e-025
Identities = 51/121 (42%), Positives = 58/121 (47%)
Frame = +1 / -2
Query: 598 SQVALLSLAH*XXTSALRDRRRS*NRSQHXXXXXXXXXXXXXXHISSQAQEEDHSGKG*C 777
SQV LLSLAH* TS+ DR +S*N+ QH H SS+ QE HSG *
Sbjct: 411 SQVLLLSLAH*M*TSS*FDRHKS*NKIQHSLQICSRSLGLRSHHTSSEVQEGYHSG*D*H 232
Query: 778 KEXCLAEADXXSNYCXTLHLLD*XXLRHPXXSXXMRLRTXXHXXXNFS*DRXXPXXDXXD 957
KE LA S+ C T HLL * H S MRL+T FS D+ P D
Sbjct: 231 KE*ALA**RSLSDCCNTSHLLC*LSPPHLGRSWTMRLKTDTRRNSGFSGDQHLPCSDGTR 52
Query: 958 P 960
P
Sbjct: 51 P 49
Score = 54.7 bits (113), Expect(2) = 2e-025
Identities = 23/33 (69%), Positives = 25/33 (75%)
Frame = +1 / -2
Query: 472 GILQLQ*HVPRENYEQLCKVRLLNSHQQRIWCT 570
GI QLQ*H RE Y Q CK LL+SH+QRIWCT
Sbjct: 537 GISQLQ*HDIRECYGQQCKALLLSSHRQRIWCT 439
>gb|BU997151.1|BU997151 HI07B06r HI Hordeum vulgare subsp. vulgare cDNA clone HI07B06
5-PRIME, mRNA sequence
Length = 614
Score = 273 bits (591), Expect = 1e-072
Identities = 106/153 (69%), Positives = 123/153 (80%)
Frame = -3 / +3
Query: 928 DLMKSXXXDXXXFSISXXRIXXDGEXXVNPEGVAYXNNLIXYLLQQGXTPYINLYHYDLP 749
DL+KS D FSIS RI DGE VN EGV Y NNLI Y+++QG TPY+NL HYD+P
Sbjct: 153 DLLKSLNFDAYRFSISWSRIFPDGEGKVNKEGVTYYNNLIDYVIKQGLTPYVNLNHYDIP 332
Query: 748 LALEKKYGGWLSAKMADLFTDYADFCFKTYGDRVKHWXXFNEPRIVALLGYDTGSNPPQR 569
LAL+KKY G+LS K+ ++F DYA+FCFKTYGDR+K+W FNEPRIVA LG+DTG+NPP R
Sbjct: 333 LALQKKYDGFLSPKIVNIFADYAEFCFKTYGDRIKNWFTFNEPRIVAALGFDTGTNPPNR 512
Query: 568 CTRCAAGGNSATEPYIVAHNFLLAHATAVARYR 470
CT+CAAGGNSATEPY V HN LL HATAVARYR
Sbjct: 513 CTKCAAGGNSATEPYTVVHNILLCHATAVARYR 611
Score = 203 bits (438), Expect = 1e-051
Identities = 104/154 (67%), Positives = 108/154 (70%)
Frame = +3 / -2
Query: 468 VRYLATAVACAKRKL*ATM*GSVAEFPPAAHLVHL*GGFDPVS*PSSATILGSLNXNQCF 647
+RYLATAVA KR L T+*GSVAEFPPAAHLVHL GGF PVS PS+ATILGSLN NQ
Sbjct: 613 LRYLATAVA*HKRMLWTTV*GSVAEFPPAAHLVHLLGGFVPVSKPSAATILGSLNVNQFL 434
Query: 648 TRSP*VLKQKSA*SVNKSAIFALNHPPYFFSSARGRS*W*RLM*GVMPC*SR*XIKLLXY 827
RSP*VLKQ SA*S N IF L P YFF SARG S*W RL *GV PC * I+LL Y
Sbjct: 433 IRSP*VLKQNSA*SANMFTIFGLKKPSYFF*SARGIS*WLRLT*GVSPCLMT*SIRLL*Y 254
Query: 828 ATPSGLTXXSPSXXILXXEIENXXXSXXXLFMRS 929
TPS LT SPS IL EIEN S LF RS
Sbjct: 253 VTPSLLTFPSPSGKILDHEIENRYASKFRLFRRS 152
Score = 144 bits (309), Expect = 8e-034
Identities = 72/152 (47%), Positives = 88/152 (57%)
Frame = +2 / -1
Query: 473 VSCNCSSMCQEKIMSNYVRFGC*IPTSSASGAPLRRI*PCVIAK*RYYPWLIEXXPVLYA 652
VS NCSSM E +M N VR C*+PT SA GAP+R + + AK YYPWLIE PVL +
Sbjct: 608 VSRNCSSMT*ENVMDNSVRLCC*VPTGSAFGAPVRGVRSSIKAKCCYYPWLIECEPVLNS 429
Query: 653 IAVGLKTEVSIVCKQVRHLRA*PPSIFLLXXXXXXXXXXXXXXSXALLKQIXYQIIVIRY 832
IA+ L+T+ SIVCK V L A* I LL S LL + YQI+VIR+
Sbjct: 428 IAISLETKFSIVCKYVHDLWA*ETIILLLKCKRDIIVVEIDIRSEPLLNDVVYQIVVIRH 249
Query: 833 TFWIDXXFAIXXDPXX*D*EPXXIXXXTFHEI 928
TF++D I DP *D*+P + F EI
Sbjct: 248 TFFVDFPLPIWEDPGP*D*KPIRVEIQAFQEI 153
Score = 133 bits (284), Expect = 2e-030
Identities = 80/152 (52%), Positives = 92/152 (60%)
Frame = -1 / +1
Query: 927 IS*KVXXXMXXGSQSHXXGSXXMAKXXSIQKV*RXTII*XXICFSKAXLLTSTFTTMIFL 748
IS*K G QSH GS M + S +KV*R T I* SK LL S TTMI L
Sbjct: 154 IS*KA*ISTRIGFQSHGPGSSQMGRGKSTKKV*RITTI**TTSLSKGSLLMSISTTMISL 333
Query: 747 LRLRRNMEGG*ARRWRTCLQTMLTSVLRPTAIA*STGXXSMSQG**RYLAMTQGQILLKG 568
L RR+M *A+R T LQTML V R AI TG SMSQG**++LA+ + L G
Sbjct: 334 LHFRRSMMVS*AQRS*TYLQTMLNFVSRLMAIELRTGSHSMSQG**QHLALILERTPLTG 513
Query: 567 APDALLVGIQQPNLT*LLIIFSWHMLLQLQDT 472
AP+AL VG QQ +LT L I FS+ MLLQL+DT
Sbjct: 514 APNALPVGTQQQSLTLLSITFSYVMLLQLRDT 609
Score = 81.3 bits (171), Expect(2) = 2e-025
Identities = 51/121 (42%), Positives = 58/121 (47%)
Frame = +1 / -3
Query: 598 SQVALLSLAH*XXTSALRDRRRS*NRSQHXXXXXXXXXXXXXXHISSQAQEEDHSGKG*C 777
SQV LLSLAH* TS+ DR +S*N+ QH H SS+ QE HSG *
Sbjct: 483 SQVLLLSLAH*M*TSS*FDRHKS*NKIQHSLQICSRSLGLRNHHTSSEVQEGYHSG*D*H 304
Query: 778 KEXCLAEADXXSNYCXTLHLLD*XXLRHPXXSXXMRLRTXXHXXXNFS*DRXXPXXDXXD 957
KE LA S+ C T HLL * H S MRL+T FS D+ P D
Sbjct: 303 KE*ALA**RSLSDCCNTSHLLC*LSPPHLGRSWTMRLKTDTRRNSGFSGDQHLPCSDGTR 124
Query: 958 P 960
P
Sbjct: 123 P 121
Score = 54.7 bits (113), Expect(2) = 2e-025
Identities = 23/33 (69%), Positives = 25/33 (75%)
Frame = +1 / -3
Query: 472 GILQLQ*HVPRENYEQLCKVRLLNSHQQRIWCT 570
GI QLQ*H RE Y Q CK LL+SH+QRIWCT
Sbjct: 609 GISQLQ*HDIRECYGQQCKALLLSSHRQRIWCT 511
>gb|AV916601.1|AV916601 AV916601 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags17p13 5', mRNA sequence
Length = 640
Score = 270 bits (584), Expect = 9e-072
Identities = 105/123 (85%), Positives = 110/123 (89%)
Frame = -3 / +2
Query: 835 GVAYXNNLIXYLLQQGXTPYINLYHYDLPLALEKKYGGWLSAKMADLFTDYADFCFKTYG 656
GVAY NNLI YLLQ+G TPYINLYHYDLPLALEKKYGGWL+AK LF DYADFCFKT+G
Sbjct: 2 GVAYYNNLINYLLQKGITPYINLYHYDLPLALEKKYGGWLNAKTVGLFADYADFCFKTFG 181
Query: 655 DRVKHWXXFNEPRIVALLGYDTGSNPPQRCTRCAAGGNSATEPYIVAHNFLLAHATAVAR 476
DRVKHW FNEPRIVALLGYD GSNPPQRC++C AGGNSATEPYIVAHNFLLAH AVAR
Sbjct: 182 DRVKHWFTFNEPRIVALLGYDVGSNPPQRCSKCTAGGNSATEPYIVAHNFLLAHGYAVAR 361
Query: 475 YRT 467
YRT
Sbjct: 362 YRT 370
Score = 226 bits (487), Expect = 2e-058
Identities = 103/124 (83%), Positives = 107/124 (86%)
Frame = +3 / -2
Query: 465 MVRYLATAVACAKRKL*ATM*GSVAEFPPAAHLVHL*GGFDPVS*PSSATILGSLNXNQC 644
+VRYLATA CAKRKL*ATM*GSVAEFPPA HL+HL*GGFDP S*P SATILGSLN NQC
Sbjct: 372 LVRYLATA*PCAKRKL*ATM*GSVAEFPPAVHLLHL*GGFDPTS*PRSATILGSLNVNQC 193
Query: 645 FTRSP*VLKQKSA*SVNKSAIFALNHPPYFFSSARGRS*W*RLM*GVMPC*SR*XIKLLX 824
FTRSP VLKQKSA*S N +FA N PPYFFSSARGRS*W*RLM*GVMP * R* I+LL
Sbjct: 192 FTRSPKVLKQKSA*SANSPTVFAFNQPPYFFSSARGRS*W*RLM*GVMPF*RR*FIRLL* 13
Query: 825 YATP 836
YATP
Sbjct: 12 YATP 1
Score = 148 bits (318), Expect = 4e-035
Identities = 71/123 (57%), Positives = 78/123 (63%)
Frame = +1 / -3
Query: 466 WYGILQLQ*HVPRENYEQLCKVRLLNSHQQRIWCTFEEDLTLCHSQVALLSLAH*XXTSA 645
W GILQL V REN EQ CKV LL+SH+Q I CTFEED TL +Q A LSL H* TSA
Sbjct: 371 WSGILQLHNRVLRENCEQQCKVLLLSSHRQCICCTFEEDSTLRRNQEAQLSLVH*M*TSA 192
Query: 646 LRDRRRS*NRSQHXXXXXXXXXXXXXXHISSQAQEEDHSGKG*CKEXCLAEADXXSNYCX 825
L DR+RS*N+SQH H SSQ QE D SGK *CKE CL+E S+YC
Sbjct: 191 LHDRQRS*NKSQHSLQIVPPSLHLTSLHTSSQVQEGDRSGKD*CKE*CLSEEGSLSDYCN 12
Query: 826 TLH 834
T H
Sbjct: 11 TRH 3
Score = 147 bits (315), Expect = 1e-034
Identities = 71/123 (57%), Positives = 79/123 (64%)
Frame = +2 / -1
Query: 467 GTVSCNCSSMCQEKIMSNYVRFGC*IPTSSASGAPLRRI*PCVIAK*RYYPWLIEXXPVL 646
G VSCNC ++C EKI+SN VRF C*+PT SA APLRRI P V+ K R YPW IE PVL
Sbjct: 370 GPVSCNCITVC*EKIVSNNVRFCC*VPTGSAFAAPLRRIRPYVVTKKRNYPWFIECKPVL 191
Query: 647 YAIAVGLKTEVSIVCKQVRHLRA*PPSIFLLXXXXXXXXXXXXXXSXALLKQIXYQIIVI 826
Y IA GLKT+VSIVCK L *P SI LL S A LK++ YQIIVI
Sbjct: 190 YTIAKGLKTKVSIVCK*SHRLCI*PASILLLKCKREIVVVKIDVRSNAFLKKVVYQIIVI 11
Query: 827 RYT 835
R T
Sbjct: 10 RDT 2
Score = 146 bits (314), Expect = 2e-034
Identities = 78/121 (64%), Positives = 86/121 (71%)
Frame = -1 / +3
Query: 828 RXTII*XXICFSKAXLLTSTFTTMIFLLRLRRNMEGG*ARRWRTCLQTMLTSVLRPTAIA 649
R TII* F KA LLTS FTT I LL LRR+ME G* +R LQTMLT VLRP AI
Sbjct: 9 RITII**TTFFRKALLLTSIFTTTISLLHLRRSMEAG*MQRRWDYLQTMLTFVLRPLAIV 188
Query: 648 *STGXXSMSQG**RYLAMTQGQILLKGAPDALLVGIQQPNLT*LLIIFSWHMLLQLQDTV 469
*STG SM+QG* R+L T G+ILLKGA +AL VG QQ NLT LL IFS H ++QLQDT
Sbjct: 189 *STGLHSMNQG*LRFLVTT*GRILLKGAANALPVGTQQQNLTLLLTIFS*HTVMQLQDTG 368
Query: 468 P 466
P
Sbjct: 369 P 371
Score = 100 bits (212), Expect(2) = 4e-028
Identities = 43/59 (72%), Positives = 45/59 (76%)
Frame = -2 / +1
Query: 647 KALVXIQ*AKDSSATWL*HRVKSSSKVHQMRCWWEFSNRTLHSCS*FSLGTCYCSCKIP 471
KALV IQ* KDS A+WL RV+SSSKV QM C WE SNRTLH CS FSL T CSCKIP
Sbjct: 190 KALVYIQ*TKDSCASWLRRRVESSSKVQQMHCRWELSNRTLHCCSQFSLSTRLCSCKIP 366
Score = 45.1 bits (92), Expect(2) = 4e-028
Identities = 21/48 (43%), Positives = 26/48 (54%)
Frame = -2 / +1
Query: 836 RCSVXQ*FDXLSASARXXXXXXXXXXXXXSCA*EEIWRVVKREDGGLV 693
RC V Q* D L +S R SC *EE+WR+VK +DGG +
Sbjct: 1 RCRVLQ*SDKLPSSERHYSLHQSLPLRSPSCT*EEVWRLVKCKDGGTI 144
>gb|AV913799.1|AV913799 AV913799 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags23f10 5', mRNA sequence
Length = 636
Score = 264 bits (572), Expect = 4e-070
Identities = 105/137 (76%), Positives = 112/137 (81%)
Frame = -3 / +3
Query: 928 DLMKSXXXDXXXFSISXXRIXXDGEXXVNPEGVAYXNNLIXYLLQQGXTPYINLYHYDLP 749
+LMK D FSIS RI DG+ VN EGVAY NNLI YLLQ+G TPYINLYHYDLP
Sbjct: 225 NLMKGLNFDAYRFSISWSRIFPDGDGKVNQEGVAYYNNLINYLLQKGITPYINLYHYDLP 404
Query: 748 LALEKKYGGWLSAKMADLFTDYADFCFKTYGDRVKHWXXFNEPRIVALLGYDTGSNPPQR 569
LALEKKYGGWL+AK LF DYADFCFKT+GDRVKHW FNEPRIVALLGYD GSNPPQR
Sbjct: 405 LALEKKYGGWLNAKTVGLFADYADFCFKTFGDRVKHWFTFNEPRIVALLGYDVGSNPPQR 584
Query: 568 CTRCAAGGNSATEPYIV 518
C++C AGGNSATEPYIV
Sbjct: 585 CSKCTAGGNSATEPYIV 635
Score = 221 bits (476), Expect = 7e-057
Identities = 104/136 (76%), Positives = 107/136 (78%)
Frame = +3 / -3
Query: 519 TM*GSVAEFPPAAHLVHL*GGFDPVS*PSSATILGSLNXNQCFTRSP*VLKQKSA*SVNK 698
TM*GSVAEFPPA HL+HL*GGFDP S*P SATILGSLN NQCFTRSP VLKQKSA*S N
Sbjct: 634 TM*GSVAEFPPAVHLLHL*GGFDPTS*PRSATILGSLNVNQCFTRSPKVLKQKSA*SANS 455
Query: 699 SAIFALNHPPYFFSSARGRS*W*RLM*GVMPC*SR*XIKLLXYATPSGLTXXSPSXXILX 878
+FA N PPYFFSSARGRS*W*RLM*GVMP * R* I+LL YATPS LT SPS IL
Sbjct: 454 PTVFAFNQPPYFFSSARGRS*W*RLM*GVMPF*RR*FIRLL*YATPSWLTFPSPSGKILD 275
Query: 879 XEIENXXXSXXXLFMR 926
EIEN S FMR
Sbjct: 274 HEIENR*ASKFNPFMR 227
Score = 143 bits (306), Expect = 2e-033
Identities = 74/148 (50%), Positives = 82/148 (55%)
Frame = +1 / -1
Query: 517 QLCKVRLLNSHQQRIWCTFEEDLTLCHSQVALLSLAH*XXTSALRDRRRS*NRSQHXXXX 696
Q CKV LL+SH+Q I CTFEED TL +Q A LSL H* TSAL DR+RS*N+SQH
Sbjct: 636 QQCKVLLLSSHRQCICCTFEEDSTLRRNQEAQLSLVH*M*TSALHDRQRS*NKSQHSLQI 457
Query: 697 XXXXXXXXXXHISSQAQEEDHSGKG*CKEXCLAEADXXSNYCXTLHLLD*XXLRHPXXSX 876
H SSQ QE D SGK *CKE CL+E S+YC T HLL * H
Sbjct: 456 VPPSLHLTSLHTSSQVQEGDRSGKD*CKE*CLSEEGSLSDYCNTRHLLG*LFRHHLGRFW 277
Query: 877 XMRLRTXXHXXXNFS*DRXXPXXDXXDP 960
MR +T H S* P D DP
Sbjct: 276 TMR*KTGRHRNSILS*G*HLPCIDGIDP 193
Score = 138 bits (296), Expect = 5e-032
Identities = 70/137 (51%), Positives = 80/137 (58%)
Frame = +2 / -2
Query: 518 NYVRFGC*IPTSSASGAPLRRI*PCVIAK*RYYPWLIEXXPVLYAIAVGLKTEVSIVCKQ 697
N VRF C*+PT SA APLRRI P V+ K R YPW IE PVLY IA GLKT+VSIVCK
Sbjct: 635 NNVRFCC*VPTGSAFAAPLRRIRPYVVTKKRNYPWFIECKPVLYTIAKGLKTKVSIVCK* 456
Query: 698 VRHLRA*PPSIFLLXXXXXXXXXXXXXXSXALLKQIXYQIIVIRYTFWIDXXFAIXXDPX 877
L *P SI LL S A LK++ YQIIVIR TF ++ I D
Sbjct: 455 SHRLCI*PASILLLKCKREIVVVKIDVRSNAFLKKVVYQIIVIRDTFLVNFSVTIWEDSG 276
Query: 878 X*D*EPXXIXXXTFHEI 928
*D +P I +FHE+
Sbjct: 275 P*DRKPVGIEIQSFHEV 225
Score = 133 bits (285), Expect = 2e-030
Identities = 79/145 (54%), Positives = 86/145 (59%)
Frame = -1 / +1
Query: 957 IXXIXXXXXXIS*KVXXXMXXGSQSHXXGSXXMAKXXSIQKV*RXTII*XXICFSKAXLL 778
I I S*K M G SH S M +KV R TII* F KA LL
Sbjct: 196 INTIDTRKMLTS*KD*ISMPTGFLSHGPESSQMVTEKLTKKVSRITII**TTFFRKALLL 375
Query: 777 TSTFTTMIFLLRLRRNMEGG*ARRWRTCLQTMLTSVLRPTAIA*STGXXSMSQG**RYLA 598
TS FTT I LL LRR+ME G* +R LQTMLT VLRP AI *STG SM+QG* R+L
Sbjct: 376 TSIFTTTISLLHLRRSMEAG*MQRRWDYLQTMLTFVLRPLAIV*STGLHSMNQG*LRFLV 555
Query: 597 MTQGQILLKGAPDALLVGIQQPNLT 523
T G+ILLKGA +AL VG QQ NLT
Sbjct: 556 TT*GRILLKGAANALPVGTQQQNLT 630
Score = 72.1 bits (151), Expect(2) = 1e-021
Identities = 31/42 (73%), Positives = 33/42 (78%)
Frame = -2 / +2
Query: 647 KALVXIQ*AKDSSATWL*HRVKSSSKVHQMRCWWEFSNRTLH 522
KALV IQ* KDS A+WL RV+SSSKV QM C WE SNRTLH
Sbjct: 506 KALVYIQ*TKDSCASWLRRRVESSSKVQQMHCRWELSNRTLH 631
Score = 51.5 bits (106), Expect(2) = 1e-021
Identities = 31/89 (34%), Positives = 38/89 (42%)
Frame = -2 / +2
Query: 959 GSXXSXXGXXRSHEKXXX*XXXVLNLXXXDXXGWRXXXQSRRCSVXQ*FDXLSASARXXX 780
GS S G HE+ V L + W RRC V Q* D L +S R
Sbjct: 194 GSIPSIQGRC*PHERIEFRCLPVFYLMVQNLPRW*RKS*PRRCRVLQ*SDKLPSSERHYS 373
Query: 779 XXXXXXXXXXSCA*EEIWRVVKREDGGLV 693
SC *EE+WR+VK +DGG +
Sbjct: 374 LHQSLPLRSPSCT*EEVWRLVKCKDGGTI 460
>gb|AV916192.1|AV916192 AV916192 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags12a16 5', mRNA sequence
Length = 444
Score = 264 bits (572), Expect = 4e-070
Identities = 102/122 (83%), Positives = 108/122 (88%)
Frame = -3 / +1
Query: 859 GEXXVNPEGVAYXNNLIXYLLQQGXTPYINLYHYDLPLALEKKYGGWLSAKMADLFTDYA 680
G+ VN EGVAY NNLI YLLQ+G TPYINLYHYDLPLALEKKYGGWL+AK LF DYA
Sbjct: 76 GDGKVNQEGVAYYNNLINYLLQKGITPYINLYHYDLPLALEKKYGGWLNAKTVGLFADYA 255
Query: 679 DFCFKTYGDRVKHWXXFNEPRIVALLGYDTGSNPPQRCTRCAAGGNSATEPYIVAHNFLL 500
DFCFKT+GDRVKHW FNEPRIVALLGYD GSNPPQRC++C AGGNSATEPYIVAHNFLL
Sbjct: 256 DFCFKTFGDRVKHWFTFNEPRIVALLGYDVGSNPPQRCSKCTAGGNSATEPYIVAHNFLL 435
Query: 499 AH 494
AH
Sbjct: 436 AH 441
Score = 221 bits (476), Expect = 7e-057
Identities = 101/122 (82%), Positives = 104/122 (85%)
Frame = +3 / -2
Query: 495 CAKRKL*ATM*GSVAEFPPAAHLVHL*GGFDPVS*PSSATILGSLNXNQCFTRSP*VLKQ 674
CAKRKL*ATM*GSVAEFPPA HL+HL*GGFDP S*P SATILGSLN NQCFTRSP VLKQ
Sbjct: 440 CAKRKL*ATM*GSVAEFPPAVHLLHL*GGFDPTS*PRSATILGSLNVNQCFTRSPKVLKQ 261
Query: 675 KSA*SVNKSAIFALNHPPYFFSSARGRS*W*RLM*GVMPC*SR*XIKLLXYATPSGLTXX 854
KSA*S N +FA N PPYFFSSARGRS*W*RLM*GVMP * R* I+LL YATPS LT
Sbjct: 260 KSA*SANSPTVFAFNQPPYFFSSARGRS*W*RLM*GVMPF*RR*FIRLL*YATPSWLTFP 81
Query: 855 SP 860
SP
Sbjct: 80 SP 75
Score = 141 bits (302), Expect = 7e-033
Identities = 69/122 (56%), Positives = 76/122 (62%)
Frame = +1 / -3
Query: 496 VPRENYEQLCKVRLLNSHQQRIWCTFEEDLTLCHSQVALLSLAH*XXTSALRDRRRS*NR 675
V REN EQ CKV LL+SH+Q I CTFEED TL +Q A LSL H* TSAL DR+RS*N+
Sbjct: 439 VLRENCEQQCKVLLLSSHRQCICCTFEEDSTLRRNQEAQLSLVH*M*TSALHDRQRS*NK 260
Query: 676 SQHXXXXXXXXXXXXXXHISSQAQEEDHSGKG*CKEXCLAEADXXSNYCXTLHLLD*XXL 855
SQH H SSQ QE D SGK *CKE CL+E S+YC T HLL *
Sbjct: 259 SQHSLQIVPPSLHLTSLHTSSQVQEGDRSGKD*CKE*CLSEEGSLSDYCNTRHLLG*LFR 80
Query: 856 RH 861
H
Sbjct: 79 HH 74
Score = 135 bits (289), Expect(2) = 4e-031
Identities = 74/115 (64%), Positives = 81/115 (70%)
Frame = -1 / +2
Query: 840 QKV*RXTII*XXICFSKAXLLTSTFTTMIFLLRLRRNMEGG*ARRWRTCLQTMLTSVLRP 661
+KV R TII* F KA LLTS FTT I LL LRR+ME G* +R LQTMLT VLRP
Sbjct: 95 KKVSRITII**TTFFRKALLLTSIFTTTISLLHLRRSMEAG*MQRRWDYLQTMLTFVLRP 274
Query: 660 TAIA*STGXXSMSQG**RYLAMTQGQILLKGAPDALLVGIQQPNLT*LLIIFSWH 496
AI *STG SM+QG* R+L T G+ILLKGA +AL VG QQ NLT LL IFS H
Sbjct: 275 LAIV*STGLHSMNQG*LRFLVTT*GRILLKGAANALPVGTQQQNLTLLLTIFS*H 439
Score = 134 bits (288), Expect = 6e-031
Identities = 66/119 (55%), Positives = 76/119 (63%)
Frame = +2 / -1
Query: 491 SMCQEKIMSNYVRFGC*IPTSSASGAPLRRI*PCVIAK*RYYPWLIEXXPVLYAIAVGLK 670
++C EKI+SN VRF C*+PT SA APLRRI P V+ K R YPW IE PVLY IA GLK
Sbjct: 444 TVC*EKIVSNNVRFCC*VPTGSAFAAPLRRIRPYVVTKKRNYPWFIECKPVLYTIAKGLK 265
Query: 671 TEVSIVCKQVRHLRA*PPSIFLLXXXXXXXXXXXXXXSXALLKQIXYQIIVIRYTFWID 847
T+VSIVCK L *P SI LL S A LK++ YQIIVIR TF ++
Sbjct: 264 TKVSIVCK*SHRLCI*PASILLLKCKREIVVVKIDVRSNAFLKKVVYQIIVIRDTFLVN 88
Score = 84.5 bits (178), Expect(2) = 4e-024
Identities = 37/51 (72%), Positives = 39/51 (76%)
Frame = -2 / +3
Query: 647 KALVXIQ*AKDSSATWL*HRVKSSSKVHQMRCWWEFSNRTLHSCS*FSLGT 495
KALV IQ* KDS A+WL RV+SSSKV QM C WE SNRTLH CS FSL T
Sbjct: 288 KALVYIQ*TKDSCASWLRRRVESSSKVQQMHCRWELSNRTLHCCSQFSLST 440
Score = 47.3 bits (97), Expect(2) = 4e-024
Identities = 22/49 (44%), Positives = 27/49 (55%)
Frame = -2 / +3
Query: 839 RRCSVXQ*FDXLSASARXXXXXXXXXXXXXSCA*EEIWRVVKREDGGLV 693
RRC V Q* D L +S R SC *EE+WR+VK +DGG +
Sbjct: 96 RRCRVLQ*SDKLPSSERHYSLHQSLPLRSPSCT*EEVWRLVKCKDGGTI 242
Score = 21.7 bits (41), Expect(2) = 4e-031
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = -3 / +3
Query: 928 DLMKSXXXDXXXFSISXXRI 869
+LMK D FSIS RI
Sbjct: 6 NLMKGLNFDAYRFSISWSRI 65
>gb|CA026968.1|CA026968 HZ57H22r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ57H22
5-PRIME, mRNA sequence
Length = 491
Score = 261 bits (565), Expect = 4e-069
Identities = 102/121 (84%), Positives = 107/121 (88%)
Frame = -3 / +3
Query: 829 AYXNNLIXYLLQQGXTPYINLYHYDLPLALEKKYGGWLSAKMADLFTDYADFCFKTYGDR 650
A NNLI YLLQ+G TPYINLYHYDLPLALEKKYGGWL+AK LF DYADFCFKT+GDR
Sbjct: 3 ARGNNLINYLLQKGITPYINLYHYDLPLALEKKYGGWLNAKTVGLFADYADFCFKTFGDR 182
Query: 649 VKHWXXFNEPRIVALLGYDTGSNPPQRCTRCAAGGNSATEPYIVAHNFLLAHATAVARYR 470
VKHW FNEPRIVALLGYD GSNPPQRC++C AGGNSATEPYIVAHNFLLAH AVARYR
Sbjct: 183 VKHWFTFNEPRIVALLGYDVGSNPPQRCSKCTAGGNSATEPYIVAHNFLLAHGYAVARYR 362
Query: 469 T 467
T
Sbjct: 363 T 365
Score = 217 bits (468), Expect = 9e-056
Identities = 99/119 (83%), Positives = 103/119 (86%)
Frame = +3 / -2
Query: 465 MVRYLATAVACAKRKL*ATM*GSVAEFPPAAHLVHL*GGFDPVS*PSSATILGSLNXNQC 644
+VRYLATA CAKRKL*ATM*GSVAEFPPA HL+HL*GGFDP S*P SATILGSLN NQC
Sbjct: 367 LVRYLATA*PCAKRKL*ATM*GSVAEFPPAVHLLHL*GGFDPTS*PRSATILGSLNVNQC 188
Query: 645 FTRSP*VLKQKSA*SVNKSAIFALNHPPYFFSSARGRS*W*RLM*GVMPC*SR*XIKLL 821
FTRSP VLKQKSA*S N +FA N PPYFFSSARGRS*W*RLM*GVMP * R* I+LL
Sbjct: 187 FTRSPKVLKQKSA*SANSPTVFAFNQPPYFFSSARGRS*W*RLM*GVMPF*RR*FIRLL 11
Score = 144 bits (308), Expect = 1e-033
Identities = 69/119 (57%), Positives = 76/119 (63%)
Frame = +1 / -3
Query: 466 WYGILQLQ*HVPRENYEQLCKVRLLNSHQQRIWCTFEEDLTLCHSQVALLSLAH*XXTSA 645
W GILQL V REN EQ CKV LL+SH+Q I CTFEED TL +Q A LSL H* TSA
Sbjct: 366 WSGILQLHNRVLRENCEQQCKVLLLSSHRQCICCTFEEDSTLHRNQEAQLSLVH*M*TSA 187
Query: 646 LRDRRRS*NRSQHXXXXXXXXXXXXXXHISSQAQEEDHSGKG*CKEXCLAEADXXSNYC 822
L DR+RS*N+SQH H SSQ QE D SGK *CKE CL+E S+YC
Sbjct: 186 LHDRQRS*NKSQHSLQIVPPSLHLTSLHTSSQVQEGDRSGKD*CKE*CLSEEGSLSDYC 10
Score = 139 bits (299), Expect = 2e-032
Identities = 66/118 (55%), Positives = 75/118 (63%)
Frame = +2 / -1
Query: 467 GTVSCNCSSMCQEKIMSNYVRFGC*IPTSSASGAPLRRI*PCVIAK*RYYPWLIEXXPVL 646
G VSCNC ++C EKI+SN VRF C*+PT SA APLRRI P ++ K R YPW IE PVL
Sbjct: 365 GPVSCNCITVC*EKIVSNNVRFCC*VPTGSAFAAPLRRIRPYIVTKKRNYPWFIECKPVL 186
Query: 647 YAIAVGLKTEVSIVCKQVRHLRA*PPSIFLLXXXXXXXXXXXXXXSXALLKQIXYQII 820
Y IA GLKT+VSIVCK L *P SI LL S A LK++ YQII
Sbjct: 185 YTIAKGLKTKVSIVCK*SHRLCI*PASILLLKCKREIVVVKIDVRSNAFLKKVVYQII 12
Score = 139 bits (299), Expect = 2e-032
Identities = 75/118 (63%), Positives = 83/118 (70%)
Frame = -1 / +1
Query: 819 II*XXICFSKAXLLTSTFTTMIFLLRLRRNMEGG*ARRWRTCLQTMLTSVLRPTAIA*ST 640
II* F KA LLTS FTT I LL LRR+ME G* +R LQTMLT VLRP AI *ST
Sbjct: 13 II**TTFFRKALLLTSIFTTTISLLHLRRSMEAG*MQRRWDYLQTMLTFVLRPLAIV*ST 192
Query: 639 GXXSMSQG**RYLAMTQGQILLKGAPDALLVGIQQPNLT*LLIIFSWHMLLQLQDTVP 466
G SM+QG* R+L G+ILLKGA +AL VG QQ NLT LL IFS H ++QLQDT P
Sbjct: 193 GLHSMNQG*LRFLVTM*GRILLKGAANALPVGTQQQNLTLLLTIFS*HTVMQLQDTGP 366
Score = 98.7 bits (209), Expect(2) = 2e-025
Identities = 43/59 (72%), Positives = 45/59 (76%)
Frame = -2 / +2
Query: 647 KALVXIQ*AKDSSATWL*HRVKSSSKVHQMRCWWEFSNRTLHSCS*FSLGTCYCSCKIP 471
KALV IQ* KDS A+WL RV+SSSKV QM C WE SNRTLH CS FSL T CSCKIP
Sbjct: 185 KALVYIQ*TKDSCASWLRCRVESSSKVQQMHCRWELSNRTLHCCSQFSLSTRLCSCKIP 361
Score = 37.7 bits (76), Expect(2) = 2e-025
Identities = 18/43 (41%), Positives = 23/43 (53%)
Frame = -2 / +2
Query: 821 Q*FDXLSASARXXXXXXXXXXXXXSCA*EEIWRVVKREDGGLV 693
Q* D L +S R SC *EE+WR+VK +DGG +
Sbjct: 11 Q*SDKLPSSERHYSLHQSLPLRSPSCT*EEVWRLVKCKDGGTI 139
>gb|BU997130.1|BU997130 HI07A02r HI Hordeum vulgare subsp. vulgare cDNA clone HI07A02
5-PRIME, mRNA sequence
Length = 632
Score = 261 bits (564), Expect = 5e-069
Identities = 100/141 (70%), Positives = 116/141 (82%)
Frame = -3 / +3
Query: 892 FSISXXRIXXDGEXXVNPEGVAYXNNLIXYLLQQGXTPYINLYHYDLPLALEKKYGGWLS 713
F IS RI DGE VN EGV Y NNLI Y+++QG TPY+NL HYD+PLAL+KKY G+LS
Sbjct: 21 FPISWSRIFPDGEGKVNKEGVTYYNNLIDYVIKQGLTPYVNLNHYDIPLALQKKYDGFLS 200
Query: 712 AKMADLFTDYADFCFKTYGDRVKHWXXFNEPRIVALLGYDTGSNPPQRCTRCAAGGNSAT 533
K+ ++F DYA+FCFKTYGDR+K+W FNEPRIVA LG+DTG+NPP RCT+CAAGGNSAT
Sbjct: 201 PKIVNIFADYAEFCFKTYGDRIKNWFTFNEPRIVAALGFDTGTNPPNRCTKCAAGGNSAT 380
Query: 532 EPYIVAHNFLLAHATAVARYR 470
EPY V HN LL HATAVARYR
Sbjct: 381 EPYTVVHNILLCHATAVARYR 443
Score = 193 bits (416), Expect = 1e-048
Identities = 98/143 (68%), Positives = 103/143 (72%)
Frame = +3 / -2
Query: 465 MVRYLATAVACAKRKL*ATM*GSVAEFPPAAHLVHL*GGFDPVS*PSSATILGSLNXNQC 644
++RYLATAVA KR L T+*GSVAEFPPAAHLVHL GGF PVS PS+ATILGSLN NQ
Sbjct: 448 LLRYLATAVA*HKRMLWTTV*GSVAEFPPAAHLVHLLGGFVPVSKPSAATILGSLNVNQF 269
Query: 645 FTRSP*VLKQKSA*SVNKSAIFALNHPPYFFSSARGRS*W*RLM*GVMPC*SR*XIKLLX 824
RSP*VLKQ SA*S N IF L P YFF SARG S*W RL *GV PC * I+LL
Sbjct: 268 LIRSP*VLKQNSA*SANMFTIFGLKKPSYFF*SARGIS*WLRLT*GVSPCLMT*SIRLL* 89
Query: 825 YATPSGLTXXSPSXXILXXEIEN 893
Y TPS LT SPS IL EI N
Sbjct: 88 YVTPSLLTFPSPSGKILDHEIGN 20
Score = 136 bits (291), Expect = 2e-031
Identities = 68/141 (48%), Positives = 83/141 (58%)
Frame = +2 / -1
Query: 473 VSCNCSSMCQEKIMSNYVRFGC*IPTSSASGAPLRRI*PCVIAK*RYYPWLIEXXPVLYA 652
VS NCSSM E +M N VR C*+PT SA GAP+R + + AK YYPWLIE PVL +
Sbjct: 440 VSRNCSSMT*ENVMDNSVRLCC*VPTGSAFGAPVRGVRSSIKAKCCYYPWLIECEPVLNS 261
Query: 653 IAVGLKTEVSIVCKQVRHLRA*PPSIFLLXXXXXXXXXXXXXXSXALLKQIXYQIIVIRY 832
IA+ L+T+ SIVCK V L A* I LL S LL + YQI+VIR+
Sbjct: 260 IAISLETKFSIVCKYVHDLWA*EAIILLLKCKRDIIVVEIDIRSEPLLNDVVYQIVVIRH 81
Query: 833 TFWIDXXFAIXXDPXX*D*EP 895
TF++D I DP *D +P
Sbjct: 80 TFFVDFPLPIWEDPGP*DWKP 18
Score = 131 bits (281), Expect = 6e-030
Identities = 76/141 (53%), Positives = 88/141 (62%)
Frame = -1 / +1
Query: 894 GSQSHXXGSXXMAKXXSIQKV*RXTII*XXICFSKAXLLTSTFTTMIFLLRLRRNMEGG* 715
G QSH GS M + S +KV*R T I* SK LL S TTMI LL RR+M *
Sbjct: 19 GFQSHGPGSSQMGRGKSTKKV*RITTI**TTSLSKGSLLMSISTTMISLLHFRRSMMAS* 198
Query: 714 ARRWRTCLQTMLTSVLRPTAIA*STGXXSMSQG**RYLAMTQGQILLKGAPDALLVGIQQ 535
A+R T LQTML V R AI TG SMSQG**++LA+ + L GAP+AL VG QQ
Sbjct: 199 AQRS*TYLQTMLNFVSRLMAIELRTGSHSMSQG**QHLALILERTPLTGAPNALPVGTQQ 378
Query: 534 PNLT*LLIIFSWHMLLQLQDT 472
+LT L I FS+ MLLQL+DT
Sbjct: 379 QSLTLLSITFSYVMLLQLRDT 441
Score = 70.3 bits (147), Expect(2) = 4e-022
Identities = 45/99 (45%), Positives = 50/99 (50%)
Frame = +1 / -3
Query: 598 SQVALLSLAH*XXTSALRDRRRS*NRSQHXXXXXXXXXXXXXXHISSQAQEEDHSGKG*C 777
SQV LLSLAH* TS+ DR +S*N+ QH H SS+ QE HSG *
Sbjct: 315 SQVLLLSLAH*M*TSS*FDRHKS*NKIQHSLQICSRSLGLRSHHTSSEVQEGYHSG*D*H 136
Query: 778 KEXCLAEADXXSNYCXTLHLLD*XXLRHPXXSXXMRLRT 894
KE LA S+ C T HLL * H S MRL T
Sbjct: 135 KE*ALA**RSLSDCCNTSHLLC*LSPPHLGRSWTMRLET 19
Score = 54.7 bits (113), Expect(2) = 4e-022
Identities = 23/33 (69%), Positives = 25/33 (75%)
Frame = +1 / -3
Query: 472 GILQLQ*HVPRENYEQLCKVRLLNSHQQRIWCT 570
GI QLQ*H RE Y Q CK LL+SH+QRIWCT
Sbjct: 441 GISQLQ*HDIRECYGQQCKALLLSSHRQRIWCT 343
>gb|CA026718.1|CA026718 HZ56L20r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ56L20
5-PRIME, mRNA sequence
Length = 328
Score = 237 bits (512), Expect = 8e-062
Identities = 90/105 (85%), Positives = 95/105 (90%)
Frame = -3 / +1
Query: 820 NNLIXYLLQQGXTPYINLYHYDLPLALEKKYGGWLSAKMADLFTDYADFCFKTYGDRVKH 641
NNLI YLLQ+G TPYINLYHYDLPLALEKKYGGWL+AK LF DYADFCFKT+GDRVKH
Sbjct: 13 NNLINYLLQKGITPYINLYHYDLPLALEKKYGGWLNAKTVGLFADYADFCFKTFGDRVKH 192
Query: 640 WXXFNEPRIVALLGYDTGSNPPQRCTRCAAGGNSATEPYIVAHNF 506
W FNEPRIVALLGYD GSNPPQRC++C AGGNSATEPYIVAHNF
Sbjct: 193 WFTFNEPRIVALLGYDVGSNPPQRCSKCTAGGNSATEPYIVAHNF 327
Score = 193 bits (415), Expect = 2e-048
Identities = 88/105 (83%), Positives = 91/105 (86%)
Frame = +3 / -3
Query: 507 KL*ATM*GSVAEFPPAAHLVHL*GGFDPVS*PSSATILGSLNXNQCFTRSP*VLKQKSA* 686
KL*ATM*GSVAEFPPA HL+HL*GGFDP S*P SATILGSLN NQCFTRSP VLKQKSA*
Sbjct: 326 KL*ATM*GSVAEFPPAVHLLHL*GGFDPTS*PRSATILGSLNVNQCFTRSPKVLKQKSA* 147
Query: 687 SVNKSAIFALNHPPYFFSSARGRS*W*RLM*GVMPC*SR*XIKLL 821
S N +FA N PPYFFSSARGRS*W*RLM*GVMP * R* I+LL
Sbjct: 146 SANSPTVFAFNQPPYFFSSARGRS*W*RLM*GVMPF*RR*FIRLL 12
Score = 128 bits (274), Expect = 5e-029
Identities = 61/106 (57%), Positives = 68/106 (64%)
Frame = +1 / -1
Query: 505 ENYEQLCKVRLLNSHQQRIWCTFEEDLTLCHSQVALLSLAH*XXTSALRDRRRS*NRSQH 684
EN EQ CKV LL+SH+Q I CTFEED TL +Q A LSL H* TSAL DR+RS*N+SQH
Sbjct: 328 ENCEQQCKVLLLSSHRQCICCTFEEDSTLHRNQEAQLSLVH*M*TSALHDRQRS*NKSQH 149
Query: 685 XXXXXXXXXXXXXXHISSQAQEEDHSGKG*CKEXCLAEADXXSNYC 822
H SSQ QE D SGK *CKE CL+E S+YC
Sbjct: 148 SLQIVPPSLHLTSLHTSSQVQEGDRSGKD*CKE*CLSEEGSLSDYC 11
Score = 122 bits (260), Expect = 4e-027
Identities = 67/105 (63%), Positives = 73/105 (69%)
Frame = -1 / +2
Query: 819 II*XXICFSKAXLLTSTFTTMIFLLRLRRNMEGG*ARRWRTCLQTMLTSVLRPTAIA*ST 640
II* F KA LLTS FTT I LL LRR+ME G* +R LQTMLT VLRP AI *ST
Sbjct: 14 II**TTFFRKALLLTSIFTTTISLLHLRRSMEAG*MQRRWDYLQTMLTFVLRPLAIV*ST 193
Query: 639 GXXSMSQG**RYLAMTQGQILLKGAPDALLVGIQQPNLT*LLIIF 505
G SM+QG* R+L G+ILLKGA +AL VG QQ NLT LL IF
Sbjct: 194 GLHSMNQG*LRFLVTM*GRILLKGAANALPVGTQQQNLTLLLTIF 328
Score = 119 bits (254), Expect = 3e-026
Identities = 58/107 (54%), Positives = 66/107 (61%)
Frame = +2 / -2
Query: 506 KIMSNYVRFGC*IPTSSASGAPLRRI*PCVIAK*RYYPWLIEXXPVLYAIAVGLKTEVSI 685
KI+SN VRF C*+PT SA APLRRI P ++ K R YPW IE PVLY IA GLKT+VSI
Sbjct: 327 KIVSNNVRFCC*VPTGSAFAAPLRRIRPYIVTKKRNYPWFIECKPVLYTIAKGLKTKVSI 148
Query: 686 VCKQVRHLRA*PPSIFLLXXXXXXXXXXXXXXSXALLKQIXYQIIVI 826
VCK L *P SI LL S A LK++ YQII +
Sbjct: 147 VCK*SHRLCI*PASILLLKCKREIVVVKIDVRSNAFLKKVVYQIIAL 7
>gb|BE601754.2|BE601754 HVSMEh0099G19f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0099G19f, mRNA sequence
Length = 505
Score = 234 bits (506), Expect = 5e-061
Identities = 92/148 (62%), Positives = 108/148 (72%)
Frame = -3 / +2
Query: 925 LMKSXXXDXXXFSISXXRIXXDGEXXVNPEGVAYXNNLIXYLLQQGXTPYINLYHYDLPL 746
+MK+ D FSIS RI DG VN EGV Y N LI Y+LQQG TPY NLYHYDLPL
Sbjct: 14 IMKNMGFDAYRFSISWSRIFPDGTGKVNQEGVDYYNRLIDYMLQQGITPYANLYHYDLPL 193
Query: 745 ALEKKYGGWLSAKMADLFTDYADFCFKTYGDRVKHWXXFNEPRIVALLGYDTGSNPPQRC 566
AL ++Y GWLS K+ F DYA+FCFK +GDRVK+W FNEPR+VA LGYD G + P RC
Sbjct: 194 ALHQQYLGWLSPKIVGAFADYAEFCFKVFGDRVKNWFTFNEPRVVAALGYDNGFHAPGRC 373
Query: 565 TRCAAGGNSATEPYIVAHNFLLAHATAV 482
++C AGG+S TEPYIV HN +L+HA AV
Sbjct: 374 SKCPAGGDSRTEPYIVTHNIILSHAAAV 457
Score = 150 bits (322), Expect = 1e-035
Identities = 78/149 (52%), Positives = 89/149 (59%)
Frame = +3 / -2
Query: 477 LATAVACAKRKL*ATM*GSVAEFPPAAHLVHL*GGFDPVS*PSSATILGSLNXNQCFTRS 656
+ TA AC + L TM GSV E PPA HL HL G + P+S P +AT LGSL NQ FT S
Sbjct: 462 VGTAAACERMILCVTMYGSVLESPPAGHLEHLPGAWKPLSYPRAATTLGSLKVNQFFTLS 283
Query: 657 P*VLKQKSA*SVNKSAIFALNHPPYFFSSARGRS*W*RLM*GVMPC*SR*XIKLLXYATP 836
P LKQ SA*S N IF L+ P Y + SA GRS*W*R GVMPC S * + LL +TP
Sbjct: 282 PNTLKQNSA*SANAPTIFGLSQPRYCWWSASGRS*W*RFAYGVMPCCSM*SMSLL**STP 103
Query: 837 SGLTXXSPSXXILXXEIENXXXSXXXLFM 923
S T PS IL E+EN S F+
Sbjct: 102 SWFTFPVPSGKILDQEMENRYASKPMFFI 16
>gb|AV916609.1|AV916609 AV916609 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags19a05 5', mRNA sequence
Length = 535
Score = 222 bits (479), Expect = 3e-057
Identities = 85/99 (85%), Positives = 89/99 (89%)
Frame = -3 / +2
Query: 763 HYDLPLALEKKYGGWLSAKMADLFTDYADFCFKTYGDRVKHWXXFNEPRIVALLGYDTGS 584
HYDLPLALEKKYGGWL+AK LF DYADFCFKT+GDRVKHW FNEPRIVALLGYD GS
Sbjct: 2 HYDLPLALEKKYGGWLNAKTVGLFADYADFCFKTFGDRVKHWFTFNEPRIVALLGYDVGS 181
Query: 583 NPPQRCTRCAAGGNSATEPYIVAHNFLLAHATAVARYRT 467
NPPQRC++C AGGNSATEPYIVAHNFLLAH AVARYRT
Sbjct: 182 NPPQRCSKCTAGGNSATEPYIVAHNFLLAHGYAVARYRT 298
Score = 187 bits (402), Expect = 1e-046
Identities = 83/99 (83%), Positives = 86/99 (86%)
Frame = +3 / -2
Query: 465 MVRYLATAVACAKRKL*ATM*GSVAEFPPAAHLVHL*GGFDPVS*PSSATILGSLNXNQC 644
+VRYLATA CAKRKL*ATM*GSVAEFPPA HL+HL*GGFDP S*P SATILGSLN NQC
Sbjct: 300 LVRYLATA*PCAKRKL*ATM*GSVAEFPPAVHLLHL*GGFDPTS*PRSATILGSLNVNQC 121
Query: 645 FTRSP*VLKQKSA*SVNKSAIFALNHPPYFFSSARGRS* 761
FTRSP VLKQKSA*S N +FA N PPYFFSSARGRS*
Sbjct: 120 FTRSPKVLKQKSA*SANSPTVFAFNQPPYFFSSARGRS* 4
Score = 129 bits (276), Expect = 3e-029
Identities = 59/91 (64%), Positives = 65/91 (71%)
Frame = +2 / -1
Query: 467 GTVSCNCSSMCQEKIMSNYVRFGC*IPTSSASGAPLRRI*PCVIAK*RYYPWLIEXXPVL 646
G VSCNC ++C EKI+SN VRF C*+PT SA APLRRI P V+ K R YPW IE PVL
Sbjct: 298 GPVSCNCITVC*EKIVSNNVRFCC*VPTGSAFAAPLRRIRPYVVTKKRNYPWFIECKPVL 119
Query: 647 YAIAVGLKTEVSIVCKQVRHLRA*PPSIFLL 739
Y IA GLKT+VSIVCK L *P SI LL
Sbjct: 118 YTIAKGLKTKVSIVCK*SHRLCI*PASILLL 26
Score = 123 bits (263), Expect = 2e-027
Identities = 64/99 (64%), Positives = 72/99 (72%)
Frame = -1 / +3
Query: 762 TMIFLLRLRRNMEGG*ARRWRTCLQTMLTSVLRPTAIA*STGXXSMSQG**RYLAMTQGQ 583
T I LL LRR+ME G* +R LQTMLT VLRP AI *STG SM+QG* R+L T G+
Sbjct: 3 TTISLLHLRRSMEAG*MQRRWDYLQTMLTFVLRPLAIV*STGLHSMNQG*LRFLVTT*GR 182
Query: 582 ILLKGAPDALLVGIQQPNLT*LLIIFSWHMLLQLQDTVP 466
ILLKGA +AL VG QQ NLT LL IFS H ++QLQDT P
Sbjct: 183 ILLKGAANALPVGTQQQNLTLLLTIFS*HTVMQLQDTGP 299
Score = 115 bits (245), Expect = 5e-025
Identities = 57/99 (57%), Positives = 62/99 (62%)
Frame = +1 / -3
Query: 466 WYGILQLQ*HVPRENYEQLCKVRLLNSHQQRIWCTFEEDLTLCHSQVALLSLAH*XXTSA 645
W GILQL V REN EQ CKV LL+SH+Q I CTFEED TL +Q A LSL H* TSA
Sbjct: 299 WSGILQLHNRVLRENCEQQCKVLLLSSHRQCICCTFEEDSTLRRNQEAQLSLVH*M*TSA 120
Query: 646 LRDRRRS*NRSQHXXXXXXXXXXXXXXHISSQAQEEDHS 762
L DR+RS*N+SQH H SSQ QE D S
Sbjct: 119 LHDRQRS*NKSQHSLQIVPPSLHLTSLHTSSQVQEGDRS 3
Score = 100 bits (212), Expect(2) = 1e-024
Identities = 43/59 (72%), Positives = 45/59 (76%)
Frame = -2 / +1
Query: 647 KALVXIQ*AKDSSATWL*HRVKSSSKVHQMRCWWEFSNRTLHSCS*FSLGTCYCSCKIP 471
KALV IQ* KDS A+WL RV+SSSKV QM C WE SNRTLH CS FSL T CSCKIP
Sbjct: 118 KALVYIQ*TKDSCASWLRRRVESSSKVQQMHCRWELSNRTLHCCSQFSLSTRLCSCKIP 294
Score = 33.6 bits (67), Expect(2) = 1e-024
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = -2 / +1
Query: 746 CA*EEIWRVVKREDGGLV 693
C *EE+WR+VK +DGG +
Sbjct: 19 CT*EEVWRLVKCKDGGTI 72
>gb|BF627691.3|BF627691 HVSMEb0005I17f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0005I17f, mRNA sequence
Length = 849
Score = 189 bits (407), Expect(2) = 4e-057
Identities = 77/107 (71%), Positives = 82/107 (76%)
Frame = -3 / +2
Query: 928 DLMKSXXXDXXXFSISXXRIXXDGEXXVNPEGVAYXNNLIXYLLQQGXTPYINLYHYDLP 749
+LMK D FSIS RI DG+ VN EGVAY NNLI YLLQ+G TPYINLYHYDLP
Sbjct: 395 NLMKGLNFDAYRFSISWSRIFPDGDGKVNQEGVAYYNNLINYLLQKGITPYINLYHYDLP 574
Query: 748 LALEKKYGGWLSAKMADLFTDYADFCFKTYGDRVKHWXXFNEPRIVA 608
LALEKKYGGWL+AK LF DYADFCFKT+GDRVKHW F EP IVA
Sbjct: 575 LALEKKYGGWLNAKTGGLFADYADFCFKTFGDRVKHWFTFMEPGIVA 715
Score = 154 bits (330), Expect(2) = 5e-043
Identities = 75/106 (70%), Positives = 78/106 (73%)
Frame = +3 / -1
Query: 609 ATILGSLNXNQCFTRSP*VLKQKSA*SVNKSAIFALNHPPYFFSSARGRS*W*RLM*GVM 788
ATI GS+N NQC TRSP VLKQKSA*S N +FA N PPYFFSSARGRS*W*RLM*GVM
Sbjct: 714 ATIPGSMNVNQCLTRSPKVLKQKSA*SANSPPVFAFNQPPYFFSSARGRS*W*RLM*GVM 535
Query: 789 PC*SR*XIKLLXYATPSGLTXXSPSXXILXXEIENXXXSXXXLFMR 926
P * R* I+LL YATPS LT SPS IL EIEN S FMR
Sbjct: 534 PF*RR*FIRLL*YATPSWLTFPSPSGKILDHEIENR*ASKFNPFMR 397
Score = 94.1 bits (199), Expect(2) = 3e-023
Identities = 60/119 (50%), Positives = 64/119 (53%)
Frame = -1 / +3
Query: 957 IXXIXXXXXXIS*KVXXXMXXGSQSHXXGSXXMAKXXSIQKV*RXTII*XXICFSKAXLL 778
I I S*K M G SH S M +KV R TII* F KA LL
Sbjct: 366 INTIDTRKMLTS*KD*ISMPTGFLSHGPESSQMVTEKLTKKVSRITII**TTFFRKALLL 545
Query: 777 TSTFTTMIFLLRLRRNMEGG*ARRWRTCLQTMLTSVLRPTAIA*STGXXSMSQG**RYL 601
TS FTT I LL LRR+ME G* +R LQTMLT VLRP AI STG S +QG* R L
Sbjct: 546 TSIFTTTISLLHLRRSMEAG*MQRRGDYLQTMLTFVLRPLAIVLSTGLHSWNQG*LRLL 722
Score = 94.1 bits (199), Expect(2) = 9e-024
Identities = 53/118 (44%), Positives = 58/118 (49%)
Frame = +1 / -2
Query: 607 ALLSLAH*XXTSALRDRRRS*NRSQHXXXXXXXXXXXXXXHISSQAQEEDHSGKG*CKEX 786
A LSL * TSA DR+RS*N+SQH H SSQ QE D SGK *CKE
Sbjct: 716 AQLSLVP*M*TSA*HDRQRS*NKSQHSLQIVPPSLHLTSLHTSSQVQEGDRSGKD*CKE* 537
Query: 787 CLAEADXXSNYCXTLHLLD*XXLRHPXXSXXMRLRTXXHXXXNFS*DRXXPXXDXXDP 960
CL+E S+YC T HLL * H MR +T H S* P D DP
Sbjct: 536 CLSEEGSLSDYCNTRHLLG*LFRHHLGRFWTMR*KTGRHRNSILS*G*HLPCIDGIDP 363
Score = 52.8 bits (109), Expect(2) = 4e-057
Identities = 21/36 (58%), Positives = 26/36 (72%)
Frame = -3 / +3
Query: 607 LLGYDTGSNPPQRCTRCAAGGNSATEPYIVAHNFLL 500
LLGYD +PP RC+RC A G+ T+PY+VA N LL
Sbjct: 717 LLGYDGRGDPP*RCSRCLARGDLTTKPYLVAPNCLL 824
Score = 40.9 bits (83), Expect(2) = 5e-043
Identities = 19/32 (59%), Positives = 22/32 (68%)
Frame = +2 / -2
Query: 509 IMSNYVRFGC*IPTSSASGAPLRRI*PCVIAK 604
I S+ VRF *+PT AS APLRRI P V+ K
Sbjct: 815 IWSHQVRFCG*VPTGKASAAPLRRIAPTVVTK 720
Score = 36.3 bits (73), Expect(2) = 9e-024
Identities = 19/34 (55%), Positives = 22/34 (64%)
Frame = +3 / -3
Query: 501 KRKL*ATM*GSVAEFPPAAHLVHL*GGFDPVS*P 602
KR+ AT *G V + P A HL+HL*GG S*P
Sbjct: 823 KRQFGATK*GFVVKSPRARHLLHL*GGSPLPS*P 722
Score = 34.5 bits (69), Expect(2) = 3e-023
Identities = 17/28 (60%), Positives = 18/28 (64%)
Frame = -1 / +1
Query: 606 YLAMTQGQILLKGAPDALLVGIQQPNLT 523
+L T G ILLKGA DAL VG NLT
Sbjct: 718 FLVTTVGAILLKGAADALPVGT*PQNLT 801
>gb|BJ462504.1|BJ462504 BJ462504 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags28n09 5', mRNA sequence
Length = 398
Score = 219 bits (473), Expect = 2e-056
Identities = 88/118 (74%), Positives = 92/118 (77%)
Frame = -3 / +1
Query: 919 KSXXXDXXXFSISXXRIXXDGEXXVNPEGVAYXNNLIXYLLQQGXTPYINLYHYDLPLAL 740
K D FSIS RI DG+ VN EGVAY NNLI YLLQ+G TPYINLYHYDLPLAL
Sbjct: 40 KGLNFDAYRFSISWSRIFPDGDGKVNQEGVAYYNNLINYLLQKGITPYINLYHYDLPLAL 219
Query: 739 EKKYGGWLSAKMADLFTDYADFCFKTYGDRVKHWXXFNEPRIVALLGYDTGSNPPQRC 566
EKKYGGWL+AK LF DYADFCFKT+GDRVKHW FNEPRIVALLGYD SNP QRC
Sbjct: 220 EKKYGGWLNAKTVGLFADYADFCFKTFGDRVKHWFTFNEPRIVALLGYDXXSNPSQRC 393
Score = 173 bits (373), Expect = 1e-042
Identities = 83/109 (76%), Positives = 85/109 (77%)
Frame = +3 / -1
Query: 567 HL*GGFDPVS*PSSATILGSLNXNQCFTRSP*VLKQKSA*SVNKSAIFALNHPPYFFSSA 746
HL* GFD S P SATILGSLN NQCFTRSP VLKQKSA*S N +FA N PPYFFSSA
Sbjct: 392 HL*EGFDXXSXPRSATILGSLNVNQCFTRSPKVLKQKSA*SANSPTVFAFNQPPYFFSSA 213
Query: 747 RGRS*W*RLM*GVMPC*SR*XIKLLXYATPSGLTXXSPSXXILXXEIEN 893
RGRS*W*RLM*GVMP * R* I+LL YATPS LT SPS IL EIEN
Sbjct: 212 RGRS*W*RLM*GVMPF*RR*FIRLL*YATPSWLTFPSPSGKILDHEIEN 66
Score = 116 bits (247), Expect = 3e-025
Identities = 65/113 (57%), Positives = 71/113 (62%)
Frame = -1 / +2
Query: 903 MXXGSQSHXXGSXXMAKXXSIQKV*RXTII*XXICFSKAXLLTSTFTTMIFLLRLRRNME 724
M G SH S M +KV R TII* F KA LLTS FTT I LL LRR+ME
Sbjct: 56 MPTGFLSHGPESSQMVTEKLTKKVSRITII**TTFFRKALLLTSIFTTTISLLHLRRSME 235
Query: 723 GG*ARRWRTCLQTMLTSVLRPTAIA*STGXXSMSQG**RYLAMTQGQILLKGA 565
G* +R LQTMLT VLRP AI *STG SM+QG* R+L T G+ILLKGA
Sbjct: 236 AG*MQRRWDYLQTMLTFVLRPLAIV*STGLHSMNQG*LRFLXTTXGRILLKGA 394
Score = 111 bits (237), Expect = 7e-024
Identities = 56/113 (49%), Positives = 62/113 (54%)
Frame = +1 / -2
Query: 565 CTFEEDLTLCHSQVALLSLAH*XXTSALRDRRRS*NRSQHXXXXXXXXXXXXXXHISSQA 744
CTFE+D T Q A LSL H* TSAL DR+RS*N+SQH H SSQ
Sbjct: 394 CTFEKDSTXRRXQEAQLSLVH*M*TSALHDRQRS*NKSQHSLQIVPPSLHLTSLHTSSQV 215
Query: 745 QEEDHSGKG*CKEXCLAEADXXSNYCXTLHLLD*XXLRHPXXSXXMRLRTXXH 903
QE D SGK *CKE CL+E S+YC T HLL * H MR +T H
Sbjct: 214 QEGDRSGKD*CKE*CLSEEGSLSDYCNTRHLLG*LFRHHLGRFWTMR*KTGRH 56
Score = 109 bits (233), Expect = 2e-023
Identities = 58/118 (49%), Positives = 66/118 (55%)
Frame = +2 / -3
Query: 566 APLRRI*PCVIAK*RYYPWLIEXXPVLYAIAVGLKTEVSIVCKQVRHLRA*PPSIFLLXX 745
APLRRI P V+ K R YPW IE PVLY IA GLKT+VSIVCK L *P SI LL
Sbjct: 393 APLRRIRPXVVXKKRNYPWFIECKPVLYTIAKGLKTKVSIVCK*SHRLCI*PASILLLKC 214
Query: 746 XXXXXXXXXXXXSXALLKQIXYQIIVIRYTFWIDXXFAIXXDPXX*D*EPXXIXXXTF 919
S A LK++ YQIIVIR TF ++ I D *D +P I +F
Sbjct: 213 KREIVVVKIDVRSNAFLKKVVYQIIVIRDTFLVNFSVTIWEDSGP*DRKPVGIEIQSF 40
>gb|BF253874.2|BF253874 HVSMEf0002F19f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0002F19f, mRNA sequence
Length = 535
Score = 215 bits (463), Expect = 4e-055
Identities = 82/98 (83%), Positives = 86/98 (87%)
Frame = -3 / +2
Query: 760 YDLPLALEKKYGGWLSAKMADLFTDYADFCFKTYGDRVKHWXXFNEPRIVALLGYDTGSN 581
YDLPLALEKKYGGWL+AK LF DYADFCFKT+GDRVKHW FNEPRIVALLGYD GSN
Sbjct: 2 YDLPLALEKKYGGWLNAKTVGLFADYADFCFKTFGDRVKHWFTFNEPRIVALLGYDVGSN 181
Query: 580 PPQRCTRCAAGGNSATEPYIVAHNFLLAHATAVARYRT 467
PPQRC++C AGGNS TEPYIVAHNFLL H AVARYRT
Sbjct: 182 PPQRCSKCTAGGNSTTEPYIVAHNFLLTHGYAVARYRT 295
Score = 183 bits (394), Expect = 1e-045
Identities = 81/99 (81%), Positives = 84/99 (84%)
Frame = +3 / -2
Query: 465 MVRYLATAVACAKRKL*ATM*GSVAEFPPAAHLVHL*GGFDPVS*PSSATILGSLNXNQC 644
+VRYLATA C KRKL*ATM*GSV EFPPA HL+HL*GGFDP S*P SATILGSLN NQC
Sbjct: 297 LVRYLATA*PCVKRKL*ATM*GSVVEFPPAVHLLHL*GGFDPTS*PRSATILGSLNVNQC 118
Query: 645 FTRSP*VLKQKSA*SVNKSAIFALNHPPYFFSSARGRS* 761
FTRSP VLKQKSA*S N +FA N PPYFFSSARGRS*
Sbjct: 117 FTRSPKVLKQKSA*SANSPTVFAFNQPPYFFSSARGRS* 1
Score = 129 bits (276), Expect = 3e-029
Identities = 59/91 (64%), Positives = 65/91 (71%)
Frame = +2 / -1
Query: 467 GTVSCNCSSMCQEKIMSNYVRFGC*IPTSSASGAPLRRI*PCVIAK*RYYPWLIEXXPVL 646
G VSCNC ++C EKI+SN VRF C*+PT SA APLRRI P V+ K R YPW IE PVL
Sbjct: 295 GPVSCNCITVC*EKIVSNNVRFCC*VPTGSAFAAPLRRIRPYVVTKKRNYPWFIECKPVL 116
Query: 647 YAIAVGLKTEVSIVCKQVRHLRA*PPSIFLL 739
Y IA GLKT+VSIVCK L *P SI LL
Sbjct: 115 YTIAKGLKTKVSIVCK*SHRLCI*PASILLL 23
Score = 121 bits (259), Expect = 6e-027
Identities = 63/97 (64%), Positives = 71/97 (73%)
Frame = -1 / +3
Query: 756 IFLLRLRRNMEGG*ARRWRTCLQTMLTSVLRPTAIA*STGXXSMSQG**RYLAMTQGQIL 577
I LL LRR+ME G* +R LQTMLT VLRP AI *STG SM+QG* R+L T G+IL
Sbjct: 6 ISLLHLRRSMEAG*MQRRWDYLQTMLTFVLRPLAIV*STGLHSMNQG*LRFLVTT*GRIL 185
Query: 576 LKGAPDALLVGIQQPNLT*LLIIFSWHMLLQLQDTVP 466
LKGA +AL VG QQ NLT LL IFS H ++QLQDT P
Sbjct: 186 LKGAANALPVGTQQQNLTLLLTIFS*HTVMQLQDTGP 296
Score = 113 bits (241), Expect = 2e-024
Identities = 56/97 (57%), Positives = 61/97 (62%)
Frame = +1 / -3
Query: 466 WYGILQLQ*HVPRENYEQLCKVRLLNSHQQRIWCTFEEDLTLCHSQVALLSLAH*XXTSA 645
W GILQL V REN EQ CKV LL+SH+Q I CTFEED TL +Q A LSL H* TSA
Sbjct: 296 WSGILQLHNRVLRENCEQQCKVLLLSSHRQCICCTFEEDSTLRRNQEAQLSLVH*M*TSA 117
Query: 646 LRDRRRS*NRSQHXXXXXXXXXXXXXXHISSQAQEED 756
L DR+RS*N+SQH H SSQ QE D
Sbjct: 116 LHDRQRS*NKSQHSLQIVPPSLHLTSLHTSSQVQEGD 6
Score = 98.7 bits (209), Expect(2) = 3e-024
Identities = 42/59 (71%), Positives = 45/59 (76%)
Frame = -2 / +1
Query: 647 KALVXIQ*AKDSSATWL*HRVKSSSKVHQMRCWWEFSNRTLHSCS*FSLGTCYCSCKIP 471
KALV IQ* KDS A+WL RV+SSSKV QM C WE +NRTLH CS FSL T CSCKIP
Sbjct: 115 KALVYIQ*TKDSCASWLRRRVESSSKVQQMHCRWELNNRTLHCCSQFSLNTRLCSCKIP 291
Score = 33.6 bits (67), Expect(2) = 3e-024
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = -2 / +1
Query: 746 CA*EEIWRVVKREDGGLV 693
C *EE+WR+VK +DGG +
Sbjct: 16 CT*EEVWRLVKCKDGGTI 69
>gb|BF257586.2|BF257586 HVSMEf0013E13f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0013E13f, mRNA sequence
Length = 521
Score = 196 bits (422), Expect(2) = 2e-054
Identities = 75/117 (64%), Positives = 92/117 (78%)
Frame = -3 / +3
Query: 928 DLMKSXXXDXXXFSISXXRIXXDGEXXVNPEGVAYXNNLIXYLLQQGXTPYINLYHYDLP 749
DL+KS D FSIS RI DGE VN EGV Y NNLI Y+++QG TPY+NL HYD+P
Sbjct: 129 DLLKSLNFDAYRFSISWSRIFPDGEGKVNKEGVTYYNNLIDYVIKQGLTPYVNLNHYDIP 308
Query: 748 LALEKKYGGWLSAKMADLFTDYADFCFKTYGDRVKHWXXFNEPRIVALLGYDTGSNP 578
LAL+KKY G+LS K+ ++F DYA+FCFKTYGDR+K+W FNEPRIV+ LG+DTG+NP
Sbjct: 309 LALQKKYDGFLSPKIVNIFADYAEFCFKTYGDRIKNWFTFNEPRIVSALGFDTGTNP 479
Score = 141 bits (303), Expect(2) = 3e-038
Identities = 74/117 (63%), Positives = 76/117 (64%)
Frame = +3 / -2
Query: 579 GFDPVS*PSSATILGSLNXNQCFTRSP*VLKQKSA*SVNKSAIFALNHPPYFFSSARGRS 758
GF PVS PS+ TILGSLN NQ RSP*VLKQ SA*S N IF L P YFF SARG S
Sbjct: 478 GFVPVSKPSADTILGSLNVNQFLIRSP*VLKQNSA*SANMFTIFGLKKPSYFF*SARGIS 299
Query: 759 *W*RLM*GVMPC*SR*XIKLLXYATPSGLTXXSPSXXILXXEIENXXXSXXXLFMRS 929
*W RL *GV PC * I+LL Y TPS LT SPS IL EIEN S LF RS
Sbjct: 298 *WLRLT*GVSPCLMT*SIRLL*YVTPSLLTFPSPSGKILDHEIENRYASKFRLFRRS 128
Score = 98.7 bits (209), Expect(2) = 3e-023
Identities = 51/110 (46%), Positives = 61/110 (55%)
Frame = +2 / -1
Query: 599 AK*RYYPWLIEXXPVLYAIAVGLKTEVSIVCKQVRHLRA*PPSIFLLXXXXXXXXXXXXX 778
AK YYPWLIE PVL +IA+ L+T+ SIVCK V L A* I LL
Sbjct: 458 AKC*YYPWLIECEPVLNSIAISLETKFSIVCKYVHDLWA*EAIILLLKCKRDIIVVEIDI 279
Query: 779 XSXALLKQIXYQIIVIRYTFWIDXXFAIXXDPXX*D*EPXXIXXXTFHEI 928
S LL I YQI+VIR+TF++D I DP *D*+P + F EI
Sbjct: 278 RSEPLLNDIVYQIVVIRHTFFVDFPLPIWKDPGP*D*KPIRVEIQAFQEI 129
Score = 37.3 bits (75), Expect(2) = 3e-038
Identities = 14/15 (93%), Positives = 15/15 (100%)
Frame = +3 / -3
Query: 537 AEFPPAAHLVHL*GG 581
+EFPPAAHLVHL*GG
Sbjct: 519 SEFPPAAHLVHL*GG 475
Score = 36.8 bits (74), Expect(2) = 2e-054
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = -3 / +2
Query: 586 SNPPQRCTRCAAGGNS 539
+ PP RCT+CAAGGNS
Sbjct: 470 NEPPYRCTKCAAGGNS 517
Score = 29.9 bits (59), Expect(2) = 3e-023
Identities = 9/12 (75%), Positives = 12/12 (100%)
Frame = +1 / -1
Query: 535 LLNSHQQRIWCT 570
+L+SH+QRIWCT
Sbjct: 521 ILSSHRQRIWCT 486
>gb|AV917009.1|AV917009 AV917009 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags20h02 5', mRNA sequence
Length = 496
Score = 204 bits (439), Expect = 9e-052
Identities = 78/92 (84%), Positives = 82/92 (89%)
Frame = -3 / +1
Query: 742 LEKKYGGWLSAKMADLFTDYADFCFKTYGDRVKHWXXFNEPRIVALLGYDTGSNPPQRCT 563
LEKKYGGWL+AK LF DYADFCFKT+GDRVKHW FNEPRIVALLGYD GSNPPQRC+
Sbjct: 7 LEKKYGGWLNAKTVGLFADYADFCFKTFGDRVKHWFTFNEPRIVALLGYDVGSNPPQRCS 186
Query: 562 RCAAGGNSATEPYIVAHNFLLAHATAVARYRT 467
+C AGGNSATEPYIVAHNFLLAH AVARYRT
Sbjct: 187 KCTAGGNSATEPYIVAHNFLLAHGYAVARYRT 282
Score = 173 bits (373), Expect = 1e-042
Identities = 76/92 (82%), Positives = 79/92 (85%)
Frame = +3 / -3
Query: 465 MVRYLATAVACAKRKL*ATM*GSVAEFPPAAHLVHL*GGFDPVS*PSSATILGSLNXNQC 644
+VRYLATA CAKRKL*ATM*GSVAEFPPA HL+HL*GGFDP S*P SATILGSLN NQC
Sbjct: 284 LVRYLATA*PCAKRKL*ATM*GSVAEFPPAVHLLHL*GGFDPTS*PRSATILGSLNVNQC 105
Query: 645 FTRSP*VLKQKSA*SVNKSAIFALNHPPYFFS 740
FTRSP VLKQKSA*S N +FA N PPYFFS
Sbjct: 104 FTRSPKVLKQKSA*SANSPTVFAFNQPPYFFS 9
Score = 129 bits (276), Expect = 3e-029
Identities = 59/91 (64%), Positives = 65/91 (71%)
Frame = +2 / -2
Query: 467 GTVSCNCSSMCQEKIMSNYVRFGC*IPTSSASGAPLRRI*PCVIAK*RYYPWLIEXXPVL 646
G VSCNC ++C EKI+SN VRF C*+PT SA APLRRI P V+ K R YPW IE PVL
Sbjct: 282 GPVSCNCITVC*EKIVSNNVRFCC*VPTGSAFAAPLRRIRPYVVTKKRNYPWFIECKPVL 103
Query: 647 YAIAVGLKTEVSIVCKQVRHLRA*PPSIFLL 739
Y IA GLKT+VSIVCK L *P SI LL
Sbjct: 102 YTIAKGLKTKVSIVCK*SHRLCI*PASILLL 10
Score = 116 bits (249), Expect = 1e-025
Identities = 60/92 (65%), Positives = 68/92 (73%)
Frame = -1 / +2
Query: 741 LRRNMEGG*ARRWRTCLQTMLTSVLRPTAIA*STGXXSMSQG**RYLAMTQGQILLKGAP 562
LRR+ME G* +R LQTMLT VLRP AI *STG SM+QG* R+L T G+ILLKGA
Sbjct: 8 LRRSMEAG*MQRRWDYLQTMLTFVLRPLAIV*STGLHSMNQG*LRFLVTT*GRILLKGAA 187
Query: 561 DALLVGIQQPNLT*LLIIFSWHMLLQLQDTVP 466
+AL VG QQ NLT LL IFS H ++QLQDT P
Sbjct: 188 NALPVGTQQQNLTLLLTIFS*HTVMQLQDTGP 283
Score = 106 bits (227), Expect = 2e-022
Identities = 53/92 (57%), Positives = 58/92 (63%)
Frame = +1 / -1
Query: 466 WYGILQLQ*HVPRENYEQLCKVRLLNSHQQRIWCTFEEDLTLCHSQVALLSLAH*XXTSA 645
W GILQL V REN EQ CKV LL+SH+Q I CTFEED TL +Q A LSL H* TSA
Sbjct: 283 WSGILQLHNRVLRENCEQQCKVLLLSSHRQCICCTFEEDSTLRRNQEAQLSLVH*M*TSA 104
Query: 646 LRDRRRS*NRSQHXXXXXXXXXXXXXXHISSQ 741
L DR+RS*N+SQH H SSQ
Sbjct: 103 LHDRQRS*NKSQHSLQIVPPSLHLTSLHTSSQ 8
Score = 100 bits (212), Expect(2) = 2e-023
Identities = 43/59 (72%), Positives = 45/59 (76%)
Frame = -2 / +3
Query: 647 KALVXIQ*AKDSSATWL*HRVKSSSKVHQMRCWWEFSNRTLHSCS*FSLGTCYCSCKIP 471
KALV IQ* KDS A+WL RV+SSSKV QM C WE SNRTLH CS FSL T CSCKIP
Sbjct: 102 KALVYIQ*TKDSCASWLRRRVESSSKVQQMHCRWELSNRTLHCCSQFSLSTRLCSCKIP 278
Score = 29.5 bits (58), Expect(2) = 2e-023
Identities = 10/16 (62%), Positives = 14/16 (87%)
Frame = -2 / +3
Query: 740 *EEIWRVVKREDGGLV 693
*EE+WR+VK +DGG +
Sbjct: 9 *EEVWRLVKCKDGGTI 56
>gb|BJ465257.1|BJ465257 BJ465257 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags39b11 5', mRNA sequence
Length = 661
Score = 204 bits (439), Expect = 9e-052
Identities = 78/92 (84%), Positives = 82/92 (89%)
Frame = -3 / +2
Query: 742 LEKKYGGWLSAKMADLFTDYADFCFKTYGDRVKHWXXFNEPRIVALLGYDTGSNPPQRCT 563
LEKKYGGWL+AK LF DYADFCFKT+GDRVKHW FNEPRIVALLGYD GSNPPQRC+
Sbjct: 2 LEKKYGGWLNAKTVGLFADYADFCFKTFGDRVKHWFTFNEPRIVALLGYDVGSNPPQRCS 181
Query: 562 RCAAGGNSATEPYIVAHNFLLAHATAVARYRT 467
+C AGGNSATEPYIVAHNFLLAH AVARYRT
Sbjct: 182 KCTAGGNSATEPYIVAHNFLLAHGYAVARYRT 277
Score = 175 bits (377), Expect = 3e-043
Identities = 77/93 (82%), Positives = 80/93 (86%)
Frame = +3 / -2
Query: 465 MVRYLATAVACAKRKL*ATM*GSVAEFPPAAHLVHL*GGFDPVS*PSSATILGSLNXNQC 644
+VRYLATA CAKRKL*ATM*GSVAEFPPA HL+HL*GGFDP S*P SATILGSLN NQC
Sbjct: 279 LVRYLATA*PCAKRKL*ATM*GSVAEFPPAVHLLHL*GGFDPTS*PRSATILGSLNVNQC 100
Query: 645 FTRSP*VLKQKSA*SVNKSAIFALNHPPYFFSS 743
FTRSP VLKQKSA*S N +FA N PPYFFSS
Sbjct: 99 FTRSPKVLKQKSA*SANSPTVFAFNQPPYFFSS 1
Score = 129 bits (276), Expect = 3e-029
Identities = 59/91 (64%), Positives = 65/91 (71%)
Frame = +2 / -1
Query: 467 GTVSCNCSSMCQEKIMSNYVRFGC*IPTSSASGAPLRRI*PCVIAK*RYYPWLIEXXPVL 646
G VSCNC ++C EKI+SN VRF C*+PT SA APLRRI P V+ K R YPW IE PVL
Sbjct: 277 GPVSCNCITVC*EKIVSNNVRFCC*VPTGSAFAAPLRRIRPYVVTKKRNYPWFIECKPVL 98
Query: 647 YAIAVGLKTEVSIVCKQVRHLRA*PPSIFLL 739
Y IA GLKT+VSIVCK L *P SI LL
Sbjct: 97 YTIAKGLKTKVSIVCK*SHRLCI*PASILLL 5
Score = 116 bits (249), Expect = 1e-025
Identities = 60/92 (65%), Positives = 68/92 (73%)
Frame = -1 / +3
Query: 741 LRRNMEGG*ARRWRTCLQTMLTSVLRPTAIA*STGXXSMSQG**RYLAMTQGQILLKGAP 562
LRR+ME G* +R LQTMLT VLRP AI *STG SM+QG* R+L T G+ILLKGA
Sbjct: 3 LRRSMEAG*MQRRWDYLQTMLTFVLRPLAIV*STGLHSMNQG*LRFLVTT*GRILLKGAA 182
Query: 561 DALLVGIQQPNLT*LLIIFSWHMLLQLQDTVP 466
+AL VG QQ NLT LL IFS H ++QLQDT P
Sbjct: 183 NALPVGTQQQNLTLLLTIFS*HTVMQLQDTGP 278
Score = 106 bits (227), Expect = 2e-022
Identities = 53/92 (57%), Positives = 58/92 (63%)
Frame = +1 / -3
Query: 466 WYGILQLQ*HVPRENYEQLCKVRLLNSHQQRIWCTFEEDLTLCHSQVALLSLAH*XXTSA 645
W GILQL V REN EQ CKV LL+SH+Q I CTFEED TL +Q A LSL H* TSA
Sbjct: 278 WSGILQLHNRVLRENCEQQCKVLLLSSHRQCICCTFEEDSTLRRNQEAQLSLVH*M*TSA 99
Query: 646 LRDRRRS*NRSQHXXXXXXXXXXXXXXHISSQ 741
L DR+RS*N+SQH H SSQ
Sbjct: 98 LHDRQRS*NKSQHSLQIVPPSLHLTSLHTSSQ 3
Score = 100 bits (212), Expect(2) = 5e-024
Identities = 43/59 (72%), Positives = 45/59 (76%)
Frame = -2 / +1
Query: 647 KALVXIQ*AKDSSATWL*HRVKSSSKVHQMRCWWEFSNRTLHSCS*FSLGTCYCSCKIP 471
KALV IQ* KDS A+WL RV+SSSKV QM C WE SNRTLH CS FSL T CSCKIP
Sbjct: 97 KALVYIQ*TKDSCASWLRRRVESSSKVQQMHCRWELSNRTLHCCSQFSLSTRLCSCKIP 273
Score = 31.3 bits (62), Expect(2) = 5e-024
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = -2 / +1
Query: 743 A*EEIWRVVKREDGGLV 693
A*EE+WR+VK +DGG +
Sbjct: 1 A*EEVWRLVKCKDGGTI 51
>gb|BU976210.1|BU976210 HA03F10r HA Hordeum vulgare subsp. vulgare cDNA clone HA03F10
5-PRIME, mRNA sequence
Length = 571
Score = 198 bits (427), Expect = 4e-050
Identities = 74/110 (67%), Positives = 87/110 (79%)
Frame = -3 / +2
Query: 799 LQQGXTPYINLYHYDLPLALEKKYGGWLSAKMADLFTDYADFCFKTYGDRVKHWXXFNEP 620
LQQG TPY NLYHYDLPLAL ++Y GWLS K+ F DYA+FCFK +GDRVK+W FNEP
Sbjct: 2 LQQGITPYANLYHYDLPLALHQQYLGWLSPKIVGAFADYAEFCFKVFGDRVKNWFTFNEP 181
Query: 619 RIVALLGYDTGSNPPQRCTRCAAGGNSATEPYIVAHNFLLAHATAVARYR 470
R+VA LGYD G + P RC++C AGG+S TEPYIV HN +L+HA AV RYR
Sbjct: 182 RVVAALGYDNGFHAPGRCSKCPAGGDSRTEPYIVTHNIILSHAAAVQRYR 331
Score = 130 bits (278), Expect = 1e-029
Identities = 63/108 (58%), Positives = 69/108 (63%)
Frame = +3 / -2
Query: 471 RYLATAVACAKRKL*ATM*GSVAEFPPAAHLVHL*GGFDPVS*PSSATILGSLNXNQCFT 650
RY TA AC + L TM GSV E PPA HL HL G + P+S P +AT LGSL NQ FT
Sbjct: 330 RYRCTAAACERMILCVTMYGSVLESPPAGHLEHLPGAWKPLSYPRAATTLGSLKVNQFFT 151
Query: 651 RSP*VLKQKSA*SVNKSAIFALNHPPYFFSSARGRS*W*RLM*GVMPC 794
SP LKQ SA*S N IF L+ P Y + SA GRS*W*R GVMPC
Sbjct: 150 LSPNTLKQNSA*SANAPTIFGLSQPRYCWWSASGRS*W*RFAYGVMPC 7
>gb|BF620280.1|BF620280 HVSMEc0019E21f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0019E21f, mRNA sequence
Length = 864
Score = 110 bits (234), Expect(2) = 6e-050
Identities = 42/64 (65%), Positives = 48/64 (75%)
Frame = -3 / +2
Query: 673 CFKTYGDRVKHWXXFNEPRIVALLGYDTGSNPPQRCTRCAAGGNSATEPYIVAHNFLLAH 494
CFKTYGDR+K+W F+EPRIVA LG + PP RCT+CAAGGNS T+PY HN LL H
Sbjct: 635 CFKTYGDRIKNWVTFHEPRIVAALGL*YWNEPPYRCTKCAAGGNSTTDPYTGVHNMLLWH 814
Query: 493 ATAV 482
AT V
Sbjct: 815 ATEV 826
Score = 108 bits (230), Expect(2) = 6e-050
Identities = 45/74 (60%), Positives = 52/74 (70%)
Frame = -3 / +3
Query: 928 DLMKSXXXDXXXFSISXXRIXXDGEXXVNPEGVAYXNNLIXYLLQQGXTPYINLYHYDLP 749
DL+KS D FSIS RI DGE VN EGV Y NNLI Y+++QG TPY+NL HYD+P
Sbjct: 378 DLLKSLNFDAYRFSISWSRIFPDGEGKVNKEGVTYYNNLIDYVIKQGLTPYVNLNHYDIP 557
Query: 748 LALEKKYGGWLSAK 707
LAL+KKYG L K
Sbjct: 558 LALQKKYGWLLKPK 599
Score = 85.8 bits (181), Expect(3) = 4e-036
Identities = 42/64 (65%), Positives = 45/64 (70%)
Frame = +3 / -1
Query: 483 TAVACAKRKL*ATM*GSVAEFPPAAHLVHL*GGFDPVS*PSSATILGSLNXNQCFTRSP* 662
T+VAC K L +*GSV EFPPAAHLVHL*GG PS+ATILGS N Q RSP*
Sbjct: 825 TSVACHKSMLWTPV*GSVVEFPPAAHLVHL*GGSFQYQSPSAATILGSWNVTQFLIRSP* 646
Query: 663 VLKQ 674
VLKQ
Sbjct: 645 VLKQ 634
Score = 81.7 bits (172), Expect(3) = 4e-036
Identities = 44/77 (57%), Positives = 45/77 (58%)
Frame = +3 / -3
Query: 699 SAIFALNHPPYFFSSARGRS*W*RLM*GVMPC*SR*XIKLLXYATPSGLTXXSPSXXILX 878
S L PYFF SARG S*W RL *GV PC * I+LL Y TPS LT SPS IL
Sbjct: 607 SRSLGLRSHPYFF*SARGIS*WLRLT*GVSPCLMT*SIRLL*YVTPSLLTFPSPSGKILD 428
Query: 879 XEIENXXXSXXXLFMRS 929
EIEN S LF RS
Sbjct: 427 HEIENRYASKFRLFRRS 377
Score = 22.6 bits (43), Expect(3) = 4e-036
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +2 / -1
Query: 665 LKTEVSIVCKQVRHLRA* 718
LK + SIVCK V L A*
Sbjct: 642 LKQDFSIVCKYVHDLWA* 589
>gb|BJ464778.1|BJ464778 BJ464778 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags37p13 5', mRNA sequence
Length = 493
Score = 186 bits (401), Expect = 2e-046
Identities = 71/86 (82%), Positives = 75/86 (87%)
Frame = -3 / +2
Query: 724 GWLSAKMADLFTDYADFCFKTYGDRVKHWXXFNEPRIVALLGYDTGSNPPQRCTRCAAGG 545
GWL+A LF DYADFCFKT+GDRVKHW FNEPRIVALLGYD GSNPPQRC++C AGG
Sbjct: 2 GWLNAXTVGLFADYADFCFKTFGDRVKHWFTFNEPRIVALLGYDVGSNPPQRCSKCTAGG 181
Query: 544 NSATEPYIVAHNFLLAHATAVARYRT 467
NSATEPYIVAHNFLLAH AVARYRT
Sbjct: 182 NSATEPYIVAHNFLLAHGYAVARYRT 259
Score = 160 bits (343), Expect = 2e-038
Identities = 71/87 (81%), Positives = 74/87 (85%)
Frame = +3 / -2
Query: 465 MVRYLATAVACAKRKL*ATM*GSVAEFPPAAHLVHL*GGFDPVS*PSSATILGSLNXNQC 644
+VRYLATA CAKRKL*ATM*GSVAEFPPA HL+HL*GGFDP S*P SATILGSLN NQC
Sbjct: 261 LVRYLATA*PCAKRKL*ATM*GSVAEFPPAVHLLHL*GGFDPTS*PRSATILGSLNVNQC 82
Query: 645 FTRSP*VLKQKSA*SVNKSAIFALNHP 725
FTRSP VLKQKSA*S N +FA N P
Sbjct: 81 FTRSPKVLKQKSA*SANSPTVFAFNQP 1
Score = 121 bits (259), Expect = 6e-027
Identities = 52/76 (68%), Positives = 58/76 (76%)
Frame = +2 / -1
Query: 467 GTVSCNCSSMCQEKIMSNYVRFGC*IPTSSASGAPLRRI*PCVIAK*RYYPWLIEXXPVL 646
G VSCNC ++C EKI+SN VRF C*+PT SA APLRRI P V+ K R YPW IE PVL
Sbjct: 259 GPVSCNCITVC*EKIVSNNVRFCC*VPTGSAFAAPLRRIRPYVVTKKRNYPWFIECKPVL 80
Query: 647 YAIAVGLKTEVSIVCK 694
Y IA GLKT+VSIVCK
Sbjct: 79 YTIAKGLKTKVSIVCK 32
Score = 104 bits (221), Expect = 1e-021
Identities = 52/76 (68%), Positives = 58/76 (76%)
Frame = -1 / +3
Query: 693 LQTMLTSVLRPTAIA*STGXXSMSQG**RYLAMTQGQILLKGAPDALLVGIQQPNLT*LL 514
LQTMLT VLRP AI *STG SM+QG* R+L T G+ILLKGA +AL VG QQ NLT LL
Sbjct: 33 LQTMLTFVLRPLAIV*STGLHSMNQG*LRFLVTT*GRILLKGAANALPVGTQQQNLTLLL 212
Query: 513 IIFSWHMLLQLQDTVP 466
IFS H ++QLQDT P
Sbjct: 213 TIFS*HTVMQLQDTGP 260
Score = 103 bits (219), Expect = 2e-021
Identities = 49/73 (67%), Positives = 54/73 (73%)
Frame = +1 / -3
Query: 466 WYGILQLQ*HVPRENYEQLCKVRLLNSHQQRIWCTFEEDLTLCHSQVALLSLAH*XXTSA 645
W GILQL V REN EQ CKV LL+SH+Q I CTFEED TL +Q A LSL H* TSA
Sbjct: 260 WSGILQLHNRVLRENCEQQCKVLLLSSHRQCICCTFEEDSTLRRNQEAQLSLVH*M*TSA 81
Query: 646 LRDRRRS*NRSQH 684
L DR+RS*N+SQH
Sbjct: 80 LHDRQRS*NKSQH 42
>gb|BQ468641.1|BQ468641 HM01N16T HM Hordeum vulgare subsp. vulgare cDNA clone HM01N16
5-PRIME, mRNA sequence
Length = 632
Score = 186 bits (401), Expect = 2e-046
Identities = 75/138 (54%), Positives = 89/138 (64%)
Frame = -3 / +3
Query: 883 SXXRIXXDGEXXVNPEGVAYXNNLIXYLLQQGXTPYINLYHYDLPLALEKKYGGWLSAKM 704
S RI G +N +GV Y + LI Y+L TPY+ LYHYDLP L +Y GWLS ++
Sbjct: 12 SWSRIFPSGIGRINKDGVDYYHRLIDYMLANNITPYVVLYHYDLPEVLNNQYNGWLSPRV 191
Query: 703 ADLFTDYADFCFKTYGDRVKHWXXFNEPRIVALLGYDTGSNPPQRCTRCAAGGNSATEPY 524
F +ADFCFKTYGDRVK+W NEPR++A GY G P RCT C GGNSATEPY
Sbjct: 192 VPDFAAFADFCFKTYGDRVKNWFTINEPRMMAWHGYGDGFFAPGRCTGCRFGGNSATEPY 371
Query: 523 IVAHNFLLAHATAVARYR 470
I H+ +LAHA AV YR
Sbjct: 372 IAGHHLILAHAAAVKVYR 425
Score = 102 bits (218), Expect = 3e-021
Identities = 60/130 (46%), Positives = 68/130 (52%)
Frame = +3 / -2
Query: 471 RYLATAVACAKRKL*ATM*GSVAEFPPAAHLVHL*GGFDPVS*PSSATILGSLNXNQCFT 650
RY TA ACA+ + M*GSVAE PP VHL G P *P A I GSL NQ FT
Sbjct: 424 RYTLTAAACARMRWWPAM*GSVAELPPKRQPVHLPGAKKPSP*PCQAIIRGSLMVNQFFT 245
Query: 651 RSP*VLKQKSA*SVNKSAIFALNHPPYFFSSARGRS*W*RLM*GVMPC*SR*XIKLLXYA 830
RSP VLKQKSA + L+ P Y+ GRS*W* GV+ S * + +
Sbjct: 244 RSPYVLKQKSAKAAKSGTTLGLSQPLYWLLRTSGRS*W*STTYGVILLASM*SMSRW**S 65
Query: 831 TPSGLTXXSP 860
TPS L P
Sbjct: 64 TPSLLILPIP 35
>gb|BU985650.1|BU985650 HF08D13r HF Hordeum vulgare subsp. vulgare cDNA clone HF08D13
5-PRIME, mRNA sequence
Length = 473
Score = 185 bits (398), Expect = 4e-046
Identities = 74/102 (72%), Positives = 79/102 (77%)
Frame = -3 / +1
Query: 928 DLMKSXXXDXXXFSISXXRIXXDGEXXVNPEGVAYXNNLIXYLLQQGXTPYINLYHYDLP 749
+LMK D FSIS RI DG+ VN EGVAY NNLI YLLQ+G TPYINLYHYDLP
Sbjct: 166 NLMKGLNFDAYRFSISWSRIFPDGDGKVNQEGVAYYNNLINYLLQKGITPYINLYHYDLP 345
Query: 748 LALEKKYGGWLSAKMADLFTDYADFCFKTYGDRVKHWXXFNE 623
LALEKKYGGWL+AK LF DYADFCFKT+GDRVKHW FNE
Sbjct: 346 LALEKKYGGWLNAKTVGLFADYADFCFKTFGDRVKHWFTFNE 471
Score = 153 bits (329), Expect = 1e-036
Identities = 74/102 (72%), Positives = 76/102 (74%)
Frame = +3 / -1
Query: 621 GSLNXNQCFTRSP*VLKQKSA*SVNKSAIFALNHPPYFFSSARGRS*W*RLM*GVMPC*S 800
GSLN NQCFTRSP VLKQKSA*S N +FA N PPYFFSSARGRS*W*RLM*GVMP *
Sbjct: 473 GSLNVNQCFTRSPKVLKQKSA*SANSPTVFAFNQPPYFFSSARGRS*W*RLM*GVMPF*R 294
Query: 801 R*XIKLLXYATPSGLTXXSPSXXILXXEIENXXXSXXXLFMR 926
R* I+LL YATPS LT SPS IL EIEN S FMR
Sbjct: 293 R*FIRLL*YATPSWLTFPSPSGKILDHEIENR*ASKFNPFMR 168
>gb|AV913514.1|AV913514 AV913514 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags22f16 5', mRNA sequence
Length = 647
Score = 149 bits (319), Expect(2) = 2e-043
Identities = 59/121 (48%), Positives = 76/121 (62%)
Frame = -3 / +2
Query: 925 LMKSXXXDXXXFSISXXRIXXDGEXXVNPEGVAYXNNLIXYLLQQGXTPYINLYHYDLPL 746
L+ D FSI+ R+ DG VN +G+ Y NNLI LL+ G P++ +YH+DLP
Sbjct: 62 LLSEMGVDAYRFSIAWPRLIPDGRGAVNAKGLEYYNNLINELLRHGIQPHVTVYHFDLPQ 241
Query: 745 ALEKKYGGWLSAKMADLFTDYADFCFKTYGDRVKHWXXFNEPRIVALLGYDTGSNPPQRC 566
AL+ +Y G LS K D +T YAD CFK +GDRVK+W NEP I + GYD G PPQRC
Sbjct: 242 ALQDEYNGMLSRKFIDDYTVYADVCFKNFGDRVKYWSTLNEPNIEPIGGYDQGFFPPQRC 421
Query: 565 T 563
+
Sbjct: 422 S 424
Score = 47.8 bits (98), Expect(2) = 2e-043
Identities = 18/26 (69%), Positives = 22/26 (84%)
Frame = -3 / +2
Query: 547 GNSATEPYIVAHNFLLAHATAVARYR 470
GNS TEPYIV H+ LLAHA+AV+ Y+
Sbjct: 452 GNSTTEPYIVTHHLLLAHASAVSLYK 529
>gb|BJ451325.1|BJ451325 BJ451325 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak33i24 5', mRNA sequence
Length = 636
Score = 149 bits (319), Expect(2) = 2e-043
Identities = 58/121 (47%), Positives = 75/121 (61%)
Frame = -3 / +3
Query: 925 LMKSXXXDXXXFSISXXRIXXDGEXXVNPEGVAYXNNLIXYLLQQGXTPYINLYHYDLPL 746
L+ D FSI+ R+ DG VNP+G+ Y NNLI LL G P++ +YH+D P
Sbjct: 15 LLSEMGVDAYRFSIAWPRLIPDGRGAVNPKGLQYYNNLINELLSHGIQPHVTIYHFDFPQ 194
Query: 745 ALEKKYGGWLSAKMADLFTDYADFCFKTYGDRVKHWXXFNEPRIVALLGYDTGSNPPQRC 566
AL+ +Y G LS K D +T YAD CFK +GDRVK+W NEP I + GYD G PP+RC
Sbjct: 195 ALQDEYHGMLSRKFIDDYTAYADVCFKNFGDRVKYWSTLNEPNIEPIGGYDVGFLPPRRC 374
Query: 565 T 563
+
Sbjct: 375 S 377
Score = 47.8 bits (98), Expect(2) = 2e-043
Identities = 18/26 (69%), Positives = 22/26 (84%)
Frame = -3 / +3
Query: 547 GNSATEPYIVAHNFLLAHATAVARYR 470
GNS TEPYIVAH+ LLAHA+A + Y+
Sbjct: 405 GNSTTEPYIVAHHLLLAHASAASLYK 482
>gb|BQ764926.1|BQ764926 EBca01_SQ005_E07_R carpel, pre-anthesis, no treatment, cv Optic,
EBca01 Hordeum vulgare subsp. vulgare cDNA clone
EBca01_SQ005_E07 5', mRNA sequence
Length = 715
Score = 174 bits (374), Expect = 8e-043
Identities = 66/76 (86%), Positives = 69/76 (90%)
Frame = -3 / +1
Query: 694 FTDYADFCFKTYGDRVKHWXXFNEPRIVALLGYDTGSNPPQRCTRCAAGGNSATEPYIVA 515
F DYADFCFKT+GDRVKHW FNEPRIVALLGYD GSNPPQRC++C AGGNSATEPYIVA
Sbjct: 1 FADYADFCFKTFGDRVKHWFTFNEPRIVALLGYDVGSNPPQRCSKCTAGGNSATEPYIVA 180
Query: 514 HNFLLAHATAVARYRT 467
HNFLLAH AVARYRT
Sbjct: 181 HNFLLAHGYAVARYRT 228
Score = 145 bits (312), Expect = 3e-034
Identities = 66/75 (88%), Positives = 68/75 (90%)
Frame = +3 / -3
Query: 465 MVRYLATAVACAKRKL*ATM*GSVAEFPPAAHLVHL*GGFDPVS*PSSATILGSLNXNQC 644
+VRYLATA CAKRKL*ATM*GSVAEFPPA HL+HL*GGFDP S*P SATILGSLN NQC
Sbjct: 230 LVRYLATA*PCAKRKL*ATM*GSVAEFPPAVHLLHL*GGFDPTS*PRSATILGSLNVNQC 51
Query: 645 FTRSP*VLKQKSA*S 689
FTRSP VLKQKSA*S
Sbjct: 50 FTRSPKVLKQKSA*S 6
Score = 121 bits (259), Expect = 6e-027
Identities = 52/76 (68%), Positives = 58/76 (76%)
Frame = +2 / -2
Query: 467 GTVSCNCSSMCQEKIMSNYVRFGC*IPTSSASGAPLRRI*PCVIAK*RYYPWLIEXXPVL 646
G VSCNC ++C EKI+SN VRF C*+PT SA APLRRI P V+ K R YPW IE PVL
Sbjct: 228 GPVSCNCITVC*EKIVSNNVRFCC*VPTGSAFAAPLRRIRPYVVTKKRNYPWFIECKPVL 49
Query: 647 YAIAVGLKTEVSIVCK 694
Y IA GLKT+VSIVCK
Sbjct: 48 YTIAKGLKTKVSIVCK 1
Score = 104 bits (221), Expect = 1e-021
Identities = 52/76 (68%), Positives = 58/76 (76%)
Frame = -1 / +2
Query: 693 LQTMLTSVLRPTAIA*STGXXSMSQG**RYLAMTQGQILLKGAPDALLVGIQQPNLT*LL 514
LQTMLT VLRP AI *STG SM+QG* R+L T G+ILLKGA +AL VG QQ NLT LL
Sbjct: 2 LQTMLTFVLRPLAIV*STGLHSMNQG*LRFLVTT*GRILLKGAANALPVGTQQQNLTLLL 181
Query: 513 IIFSWHMLLQLQDTVP 466
IFS H ++QLQDT P
Sbjct: 182 TIFS*HTVMQLQDTGP 229
Score = 103 bits (219), Expect = 2e-021
Identities = 49/73 (67%), Positives = 54/73 (73%)
Frame = +1 / -1
Query: 466 WYGILQLQ*HVPRENYEQLCKVRLLNSHQQRIWCTFEEDLTLCHSQVALLSLAH*XXTSA 645
W GILQL V REN EQ CKV LL+SH+Q I CTFEED TL +Q A LSL H* TSA
Sbjct: 229 WSGILQLHNRVLRENCEQQCKVLLLSSHRQCICCTFEEDSTLRRNQEAQLSLVH*M*TSA 50
Query: 646 LRDRRRS*NRSQH 684
L DR+RS*N+SQH
Sbjct: 49 LHDRQRS*NKSQH 11
>gb|BU995874.1|BU995874 HM11K09r HM Hordeum vulgare subsp. vulgare cDNA clone HM11K09
5-PRIME, mRNA sequence
Length = 620
Score = 145 bits (312), Expect(2) = 1e-042
Identities = 56/114 (49%), Positives = 73/114 (64%)
Frame = -3 / +2
Query: 904 DXXXFSISXXRIXXDGEXXVNPEGVAYXNNLIXYLLQQGXTPYINLYHYDLPLALEKKYG 725
D FSI+ R+ DG VNP+G+ Y NNLI LL G P++ +YH+D P AL+ +Y
Sbjct: 35 DAYRFSIAWPRLIPDGRGAVNPKGLEYYNNLIDELLAHGIQPHVTIYHFDFPQALQDEYN 214
Query: 724 GWLSAKMADLFTDYADFCFKTYGDRVKHWXXFNEPRIVALLGYDTGSNPPQRCT 563
G LS K D +T YA+ CFK +GDRVK+W NEP I + GYD G PP+RC+
Sbjct: 215 GMLSRKFVDDYTAYAEVCFKNFGDRVKYWSTVNEPNIEPIGGYDQGILPPRRCS 376
Score = 47.8 bits (98), Expect(2) = 1e-042
Identities = 18/26 (69%), Positives = 22/26 (84%)
Frame = -3 / +2
Query: 547 GNSATEPYIVAHNFLLAHATAVARYR 470
GNS TEPYIVAH+ LLAHA+A + Y+
Sbjct: 407 GNSTTEPYIVAHHLLLAHASAASLYK 484
>gb|CA032870.1|CA032870 HX14G24r HX Hordeum vulgare subsp. vulgare cDNA clone HX14G24
5-PRIME, mRNA sequence
Length = 631
Score = 172 bits (371), Expect = 2e-042
Identities = 70/96 (72%), Positives = 75/96 (78%)
Frame = -3 / +2
Query: 928 DLMKSXXXDXXXFSISXXRIXXDGEXXVNPEGVAYXNNLIXYLLQQGXTPYINLYHYDLP 749
+LMK D FSIS RI DG+ VN EGVAY NNLI YLLQ+G TPYINLYHYDLP
Sbjct: 344 NLMKGLNFDAYRFSISWSRIFPDGDGKVNQEGVAYYNNLINYLLQKGITPYINLYHYDLP 523
Query: 748 LALEKKYGGWLSAKMADLFTDYADFCFKTYGDRVKH 641
LALEKKYGGWL+AK LF DYADFCFKT+GDRVKH
Sbjct: 524 LALEKKYGGWLNAKTVGLFADYADFCFKTFGDRVKH 631
Score = 139 bits (299), Expect = 2e-032
Identities = 68/95 (71%), Positives = 70/95 (73%)
Frame = +3 / -2
Query: 642 CFTRSP*VLKQKSA*SVNKSAIFALNHPPYFFSSARGRS*W*RLM*GVMPC*SR*XIKLL 821
CFTRSP VLKQKSA*S N +FA N PPYFFSSARGRS*W*RLM*GVMP * R* I+LL
Sbjct: 630 CFTRSPKVLKQKSA*SANSPTVFAFNQPPYFFSSARGRS*W*RLM*GVMPF*RR*FIRLL 451
Query: 822 XYATPSGLTXXSPSXXILXXEIENXXXSXXXLFMR 926
YATPS LT SPS IL EIEN S FMR
Sbjct: 450 *YATPSWLTFPSPSGKILDHEIENR*ASKFNPFMR 346
>gb|BI947104.1|BI947104 HVSMEl0003L04f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0003L04f, mRNA sequence
Length = 1046
Score = 144 bits (308), Expect(2) = 5e-042
Identities = 55/110 (50%), Positives = 72/110 (65%)
Frame = -3 / +2
Query: 892 FSISXXRIXXDGEXXVNPEGVAYXNNLIXYLLQQGXTPYINLYHYDLPLALEKKYGGWLS 713
FSI+ R+ DG VNP+G+ Y NNLI LL G P++ +YH+D P AL+ +Y G LS
Sbjct: 2 FSIAWPRLIPDGRGAVNPKGLEYYNNLIDELLAHGIQPHVTIYHFDFPQALQDEYNGMLS 181
Query: 712 AKMADLFTDYADFCFKTYGDRVKHWXXFNEPRIVALLGYDTGSNPPQRCT 563
K D +T YA+ CFK +GDRVK+W NEP I + GYD G PP+RC+
Sbjct: 182 RKFVDDYTAYAEVCFKNFGDRVKYWSTVNEPNIEPIGGYDQGILPPRRCS 331
Score = 47.8 bits (98), Expect(2) = 5e-042
Identities = 18/26 (69%), Positives = 22/26 (84%)
Frame = -3 / +2
Query: 547 GNSATEPYIVAHNFLLAHATAVARYR 470
GNS TEPYIVAH+ LLAHA+A + Y+
Sbjct: 362 GNSTTEPYIVAHHLLLAHASAASLYK 439
>gb|BI949850.1|BI949850 HVSMEl0016H12f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0016H12f, mRNA sequence
Length = 543
Score = 169 bits (363), Expect = 3e-041
Identities = 69/95 (72%), Positives = 74/95 (77%)
Frame = -3 / +2
Query: 928 DLMKSXXXDXXXFSISXXRIXXDGEXXVNPEGVAYXNNLIXYLLQQGXTPYINLYHYDLP 749
+LMK D FSIS RI DG+ VN EGVAY NNLI YLLQ+G TPYINLYHYDLP
Sbjct: 257 NLMKGLNFDAYRFSISWSRIFPDGDGKVNQEGVAYYNNLINYLLQKGITPYINLYHYDLP 436
Query: 748 LALEKKYGGWLSAKMADLFTDYADFCFKTYGDRVK 644
LALEKKYGGWL+AK LF DYADFCFKT+GDRVK
Sbjct: 437 LALEKKYGGWLNAKTVGLFADYADFCFKTFGDRVK 541
Score = 135 bits (290), Expect = 3e-031
Identities = 67/94 (71%), Positives = 69/94 (73%)
Frame = +3 / -1
Query: 645 FTRSP*VLKQKSA*SVNKSAIFALNHPPYFFSSARGRS*W*RLM*GVMPC*SR*XIKLLX 824
FTRSP VLKQKSA*S N +FA N PPYFFSSARGRS*W*RLM*GVMP * R* I+LL
Sbjct: 540 FTRSPKVLKQKSA*SANSPTVFAFNQPPYFFSSARGRS*W*RLM*GVMPF*RR*FIRLL* 361
Query: 825 YATPSGLTXXSPSXXILXXEIENXXXSXXXLFMR 926
YATPS LT SPS IL EIEN S FMR
Sbjct: 360 YATPSWLTFPSPSGKILDHEIENR*ASKFNPFMR 259
>gb|BJ463364.1|BJ463364 BJ463364 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags27d04 5', mRNA sequence
Length = 649
Score = 163 bits (351), Expect = 1e-039
Identities = 62/71 (87%), Positives = 65/71 (91%)
Frame = -3 / +3
Query: 679 DFCFKTYGDRVKHWXXFNEPRIVALLGYDTGSNPPQRCTRCAAGGNSATEPYIVAHNFLL 500
DFCFKT+GDRVKHW FNEPRIVALLGYD GSNPPQRC++C AGGNSATEPYIVAHNFLL
Sbjct: 3 DFCFKTFGDRVKHWFTFNEPRIVALLGYDVGSNPPQRCSKCTAGGNSATEPYIVAHNFLL 182
Query: 499 AHATAVARYRT 467
AH AVARYRT
Sbjct: 183 AHGYAVARYRT 215
Score = 141 bits (303), Expect = 5e-033
Identities = 63/72 (87%), Positives = 65/72 (90%)
Frame = +3 / -1
Query: 465 MVRYLATAVACAKRKL*ATM*GSVAEFPPAAHLVHL*GGFDPVS*PSSATILGSLNXNQC 644
+VRYLATA CAKRKL*ATM*GSVAEFPPA HL+HL*GGFDP S*P SATILGSLN NQC
Sbjct: 217 LVRYLATA*PCAKRKL*ATM*GSVAEFPPAVHLLHL*GGFDPTS*PRSATILGSLNVNQC 38
Query: 645 FTRSP*VLKQKS 680
FTRSP VLKQKS
Sbjct: 37 FTRSPKVLKQKS 2
Score = 109 bits (233), Expect = 2e-023
Identities = 47/71 (66%), Positives = 53/71 (74%)
Frame = +2 / -3
Query: 467 GTVSCNCSSMCQEKIMSNYVRFGC*IPTSSASGAPLRRI*PCVIAK*RYYPWLIEXXPVL 646
G VSCNC ++C EKI+SN VRF C*+PT SA APLRRI P V+ K R YPW IE PVL
Sbjct: 215 GPVSCNCITVC*EKIVSNNVRFCC*VPTGSAFAAPLRRIRPYVVTKKRNYPWFIECKPVL 36
Query: 647 YAIAVGLKTEV 679
Y IA GLKT+V
Sbjct: 35 YTIAKGLKTKV 3
>gb|CA002958.1|CA002958 HS09A03r HS Hordeum vulgare subsp. vulgare cDNA clone HS09A03
5-PRIME, mRNA sequence
Length = 447
Score = 133 bits (286), Expect(2) = 5e-039
Identities = 51/95 (53%), Positives = 65/95 (68%)
Frame = -3 / +2
Query: 847 VNPEGVAYXNNLIXYLLQQGXTPYINLYHYDLPLALEKKYGGWLSAKMADLFTDYADFCF 668
VN +G+ Y NNLI LL+ G P++ +YH+DLP AL+ +Y G LS K D +T YAD CF
Sbjct: 11 VNAKGLEYYNNLINELLRHGIQPHVTVYHFDLPQALQDEYNGMLSRKFIDDYTVYADVCF 190
Query: 667 KTYGDRVKHWXXFNEPRIVALLGYDTGSNPPQRCT 563
K +GDRVK+W NEP I + GYD G PPQRC+
Sbjct: 191 KNFGDRVKYWSTLNEPNIEPIGGYDQGFFPPQRCS 295
Score = 47.8 bits (98), Expect(2) = 5e-039
Identities = 18/26 (69%), Positives = 22/26 (84%)
Frame = -3 / +2
Query: 547 GNSATEPYIVAHNFLLAHATAVARYR 470
GNS TEPYIV H+ LLAHA+AV+ Y+
Sbjct: 323 GNSTTEPYIVTHHLLLAHASAVSLYK 400
>gb|AL503928.1|AL503928 AL503928 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW03O02T 5', mRNA sequence
Length = 700
Score = 153 bits (329), Expect(2) = 1e-038
Identities = 63/88 (71%), Positives = 67/88 (76%)
Frame = -3 / +1
Query: 928 DLMKSXXXDXXXFSISXXRIXXDGEXXVNPEGVAYXNNLIXYLLQQGXTPYINLYHYDLP 749
+LMK D FSIS RI DG+ VN EGVAY NNLI YLLQ+G TPYINLYHYDLP
Sbjct: 385 NLMKGLNFDAYRFSISWSRIFPDGDGKVNQEGVAYYNNLINYLLQKGITPYINLYHYDLP 564
Query: 748 LALEKKYGGWLSAKMADLFTDYADFCFK 665
LALEKKYGGWL+AK LF DYADFCFK
Sbjct: 565 LALEKKYGGWLNAKTVGLFADYADFCFK 648
Score = 123 bits (263), Expect(2) = 8e-029
Identities = 61/87 (70%), Positives = 63/87 (72%)
Frame = +3 / -3
Query: 666 LKQKSA*SVNKSAIFALNHPPYFFSSARGRS*W*RLM*GVMPC*SR*XIKLLXYATPSGL 845
LKQKSA*S N +FA N PPYFFSSARGRS*W*RLM*GVMP * R* I+LL YATPS L
Sbjct: 647 LKQKSA*SANSPTVFAFNQPPYFFSSARGRS*W*RLM*GVMPF*RR*FIRLL*YATPSWL 468
Query: 846 TXXSPSXXILXXEIENXXXSXXXLFMR 926
T SPS IL EIEN S FMR
Sbjct: 467 TFPSPSGKILDHEIENR*ASKFNPFMR 387
Score = 26.7 bits (52), Expect(2) = 1e-038
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -3 / +2
Query: 676 FCFKTYGDRVKH 641
F KT+GDRVKH
Sbjct: 638 FVLKTFGDRVKH 673
Score = 24.0 bits (46), Expect(2) = 8e-029
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +3 / -2
Query: 639 QCFTRSP*VLKQK 677
+CFTRSP V K K
Sbjct: 675 KCFTRSPKVFKTK 637
>gb|BU984656.1|BU984656 HF04J11r HF Hordeum vulgare subsp. vulgare cDNA clone HF04J11
5-PRIME, mRNA sequence
Length = 634
Score = 126 bits (270), Expect(2) = 8e-037
Identities = 48/88 (54%), Positives = 60/88 (68%)
Frame = -3 / +3
Query: 826 YXNNLIXYLLQQGXTPYINLYHYDLPLALEKKYGGWLSAKMADLFTDYADFCFKTYGDRV 647
Y NNLI LL+ G P++ +YH+DLP AL+ +Y G LS K D +T YAD CFK +GDRV
Sbjct: 12 YYNNLINELLRHGIQPHVTVYHFDLPQALQDEYNGMLSRKFIDDYTVYADVCFKNFGDRV 191
Query: 646 KHWXXFNEPRIVALLGYDTGSNPPQRCT 563
K+W NEP I + GYD G PPQRC+
Sbjct: 192 KYWSTLNEPNIEPIGGYDQGFFPPQRCS 275
Score = 47.8 bits (98), Expect(2) = 8e-037
Identities = 18/26 (69%), Positives = 22/26 (84%)
Frame = -3 / +3
Query: 547 GNSATEPYIVAHNFLLAHATAVARYR 470
GNS TEPYIV H+ LLAHA+AV+ Y+
Sbjct: 303 GNSTTEPYIVTHHLLLAHASAVSLYK 380
>gb|AV917011.1|AV917011 AV917011 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags20h04 5', mRNA sequence
Length = 597
Score = 154 bits (330), Expect = 1e-036
Identities = 59/68 (86%), Positives = 62/68 (91%)
Frame = -3 / +2
Query: 670 FKTYGDRVKHWXXFNEPRIVALLGYDTGSNPPQRCTRCAAGGNSATEPYIVAHNFLLAHA 491
FKT+GDRVKHW FNEPRIVALLGYD GSNPPQRC++C AGGNSATEPYIVAHNFLLAH
Sbjct: 26 FKTFGDRVKHWFTFNEPRIVALLGYDVGSNPPQRCSKCTAGGNSATEPYIVAHNFLLAHG 205
Query: 490 TAVARYRT 467
AVARYRT
Sbjct: 206 YAVARYRT 229
Score = 133 bits (284), Expect = 2e-030
Identities = 59/68 (86%), Positives = 61/68 (89%)
Frame = +3 / -1
Query: 465 MVRYLATAVACAKRKL*ATM*GSVAEFPPAAHLVHL*GGFDPVS*PSSATILGSLNXNQC 644
+VRYLATA CAKRKL*ATM*GSVAEFPPA HL+HL*GGFDP S*P SATILGSLN NQC
Sbjct: 231 LVRYLATA*PCAKRKL*ATM*GSVAEFPPAVHLLHL*GGFDPTS*PRSATILGSLNVNQC 52
Query: 645 FTRSP*VL 668
FTRSP VL
Sbjct: 51 FTRSPKVL 28
Score = 105 bits (223), Expect = 6e-022
Identities = 45/68 (66%), Positives = 50/68 (73%)
Frame = +2 / -3
Query: 467 GTVSCNCSSMCQEKIMSNYVRFGC*IPTSSASGAPLRRI*PCVIAK*RYYPWLIEXXPVL 646
G VSCNC ++C EKI+SN VRF C*+PT SA APLRRI P V+ K R YPW IE PVL
Sbjct: 229 GPVSCNCITVC*EKIVSNNVRFCC*VPTGSAFAAPLRRIRPYVVTKKRNYPWFIECKPVL 50
Query: 647 YAIAVGLK 670
Y IA GLK
Sbjct: 49 YTIAKGLK 26
>gb|BQ466003.1|BQ466003 HT01E20T HT Hordeum vulgare subsp. vulgare cDNA clone HT01E20
5-PRIME, mRNA sequence
Length = 626
Score = 147 bits (315), Expect(2) = 1e-036
Identities = 57/121 (47%), Positives = 75/121 (61%)
Frame = -3 / +2
Query: 925 LMKSXXXDXXXFSISXXRIXXDGEXXVNPEGVAYXNNLIXYLLQQGXTPYINLYHYDLPL 746
L+ D FSI+ R+ DG VNP+G+ Y NNLI LL G P++ +YH+D P
Sbjct: 200 LLSDMGVDAYRFSIAWPRLIPDGRGAVNPKGLEYYNNLIDELLAHGIQPHVTIYHFDFPQ 379
Query: 745 ALEKKYGGWLSAKMADLFTDYADFCFKTYGDRVKHWXXFNEPRIVALLGYDTGSNPPQRC 566
AL+ +Y G LS K D +T YA+ CFK +GDRVK+W NEP I + GYD G PP+RC
Sbjct: 380 ALQDEYNGMLSRKFVDDYTAYAEVCFKNFGDRVKYWSTVNEPNIEPIGGYDQGILPPRRC 559
Query: 565 T 563
+
Sbjct: 560 S 562
Score = 26.7 bits (52), Expect(2) = 1e-036
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = -3 / +2
Query: 547 GNSATEPYIVA 515
GNS TEPYIVA
Sbjct: 593 GNSTTEPYIVA 625
>gb|CA024908.1|CA024908 HZ50K17r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ50K17
5-PRIME, mRNA sequence
Length = 429
Score = 153 bits (329), Expect = 1e-036
Identities = 63/88 (71%), Positives = 67/88 (76%)
Frame = -3 / +2
Query: 928 DLMKSXXXDXXXFSISXXRIXXDGEXXVNPEGVAYXNNLIXYLLQQGXTPYINLYHYDLP 749
+LMK D FSIS RI DG+ VN EGVAY NNLI YLLQ+G TPYINLYHYDLP
Sbjct: 164 NLMKGLNFDAYRFSISWSRIFPDGDGKVNQEGVAYYNNLINYLLQKGITPYINLYHYDLP 343
Query: 748 LALEKKYGGWLSAKMADLFTDYADFCFK 665
LALEKKYGGWL+AK LF DYADFCFK
Sbjct: 344 LALEKKYGGWLNAKTVGLFADYADFCFK 427
Score = 125 bits (267), Expect = 5e-028
Identities = 62/88 (70%), Positives = 64/88 (72%)
Frame = +3 / -1
Query: 663 VLKQKSA*SVNKSAIFALNHPPYFFSSARGRS*W*RLM*GVMPC*SR*XIKLLXYATPSG 842
VLKQKSA*S N +FA N PPYFFSSARGRS*W*RLM*GVMP * R* I+LL YATPS
Sbjct: 429 VLKQKSA*SANSPTVFAFNQPPYFFSSARGRS*W*RLM*GVMPF*RR*FIRLL*YATPSW 250
Query: 843 LTXXSPSXXILXXEIENXXXSXXXLFMR 926
LT SPS IL EIEN S FMR
Sbjct: 249 LTFPSPSGKILDHEIENR*ASKFNPFMR 166
>gb|BI778494.2|BI778494 EBro07_SQ003_H09_R root, 3 week, reduced light, cv Optic, EBro07
Hordeum vulgare subsp. vulgare cDNA clone
EBro07_SQ003_H09 5', mRNA sequence
Length = 618
Score = 152 bits (326), Expect = 3e-036
Identities = 58/121 (47%), Positives = 78/121 (64%)
Frame = -3 / +1
Query: 925 LMKSXXXDXXXFSISXXRIXXDGEXXVNPEGVAYXNNLIXYLLQQGXTPYINLYHYDLPL 746
LM D FSIS R+ DG +NP+G+ Y NNLI L+ G P++ +YH+DLP
Sbjct: 247 LMHKMGLDAYRFSISWPRLIPDGRRQINPKGLEYYNNLIDELILYGIQPHVTIYHFDLPQ 426
Query: 745 ALEKKYGGWLSAKMADLFTDYADFCFKTYGDRVKHWXXFNEPRIVALLGYDTGSNPPQRC 566
L+ +YGG LS + + +T YA+ CFK++GDRVKHW NEP I + GYD GS PP+RC
Sbjct: 427 VLQDEYGGLLSPRFIEDYTAYANVCFKSFGDRVKHWVTVNEPNIEPIGGYDNGSQPPRRC 606
Query: 565 T 563
+
Sbjct: 607 S 609
>gb|CA003210.1|CA003210 HS09M01r HS Hordeum vulgare subsp. vulgare cDNA clone HS09M01
5-PRIME, mRNA sequence
Length = 379
Score = 133 bits (286), Expect(2) = 4e-036
Identities = 51/95 (53%), Positives = 65/95 (68%)
Frame = -3 / +3
Query: 847 VNPEGVAYXNNLIXYLLQQGXTPYINLYHYDLPLALEKKYGGWLSAKMADLFTDYADFCF 668
VN +G+ Y NNLI LL+ G P++ +YH+DLP AL+ +Y G LS K D +T YAD CF
Sbjct: 12 VNAKGLEYYNNLINELLRHGIQPHVTVYHFDLPQALQDEYNGMLSRKFIDDYTVYADVCF 191
Query: 667 KTYGDRVKHWXXFNEPRIVALLGYDTGSNPPQRCT 563
K +GDRVK+W NEP I + GYD G PPQRC+
Sbjct: 192 KNFGDRVKYWSTLNEPNIEPIGGYDQGFFPPQRCS 296
Score = 38.2 bits (77), Expect(2) = 4e-036
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = -3 / +3
Query: 547 GNSATEPYIVAHNFLLAH 494
GNS TEPYIV H+ LLAH
Sbjct: 324 GNSTTEPYIVTHHLLLAH 377
>gb|BQ464194.1|BQ464194 HF01J17T HF Hordeum vulgare subsp. vulgare cDNA clone HF01J17
5-PRIME, mRNA sequence
Length = 700
Score = 123 bits (264), Expect(2) = 5e-036
Identities = 47/86 (54%), Positives = 59/86 (68%)
Frame = -3 / +3
Query: 820 NNLIXYLLQQGXTPYINLYHYDLPLALEKKYGGWLSAKMADLFTDYADFCFKTYGDRVKH 641
NNLI LL+ G P++ +YH+DLP AL+ +Y G LS K D +T YAD CFK +GDRVK+
Sbjct: 15 NNLINELLRHGIQPHVTVYHFDLPQALQDEYNGMLSRKFIDDYTVYADVCFKNFGDRVKY 194
Query: 640 WXXFNEPRIVALLGYDTGSNPPQRCT 563
W NEP I + GYD G PPQRC+
Sbjct: 195 WSTLNEPNIEPIGGYDQGFFPPQRCS 272
Score = 47.8 bits (98), Expect(2) = 5e-036
Identities = 18/26 (69%), Positives = 22/26 (84%)
Frame = -3 / +3
Query: 547 GNSATEPYIVAHNFLLAHATAVARYR 470
GNS TEPYIV H+ LLAHA+AV+ Y+
Sbjct: 300 GNSTTEPYIVTHHLLLAHASAVSLYK 377
>gb|AL504759.1|AL504759 AL504759 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW06E22V 5', mRNA sequence
Length = 700
Score = 150 bits (323), Expect = 9e-036
Identities = 62/88 (70%), Positives = 66/88 (75%)
Frame = -3 / +1
Query: 928 DLMKSXXXDXXXFSISXXRIXXDGEXXVNPEGVAYXNNLIXYLLQQGXTPYINLYHYDLP 749
+LMK D FSIS RI DG+ VN EGVAY NNLI YLLQ+G TPYINLYHYDLP
Sbjct: 388 NLMKGLNFDAYRFSISWSRIFPDGDGKVNQEGVAYYNNLINYLLQKGITPYINLYHYDLP 567
Query: 748 LALEKKYGGWLSAKMADLFTDYADFCFK 665
LALE KYGGWL+AK LF DYADFCFK
Sbjct: 568 LALEXKYGGWLNAKTVGLFADYADFCFK 651
Score = 120 bits (256), Expect = 2e-026
Identities = 60/87 (68%), Positives = 62/87 (71%)
Frame = +3 / -3
Query: 666 LKQKSA*SVNKSAIFALNHPPYFFSSARGRS*W*RLM*GVMPC*SR*XIKLLXYATPSGL 845
LKQKSA*S N +FA N PPYF SSARGRS*W*RLM*GVMP * R* I+LL YATPS L
Sbjct: 650 LKQKSA*SANSPTVFAFNQPPYFXSSARGRS*W*RLM*GVMPF*RR*FIRLL*YATPSWL 471
Query: 846 TXXSPSXXILXXEIENXXXSXXXLFMR 926
T SPS IL EIEN S FMR
Sbjct: 470 TFPSPSGKILDHEIENR*ASKFNPFMR 390
>gb|CA014891.1|CA014891 HT12K07r HT Hordeum vulgare subsp. vulgare cDNA clone HT12K07
5-PRIME, mRNA sequence
Length = 647
Score = 126 bits (270), Expect(2) = 9e-036
Identities = 51/121 (42%), Positives = 70/121 (57%)
Frame = -3 / +2
Query: 925 LMKSXXXDXXXFSISXXRIXXDGEXXVNPEGVAYXNNLIXYLLQQGXTPYINLYHYDLPL 746
LM + FSIS R+ DG VNP+G+ Y NNLI L+Q G +I +Y + P
Sbjct: 176 LMVDTHLEAYRFSISWSRLIPDGRGAVNPKGLEYYNNLIDALVQHGIQVHIMIYQLEYPQ 355
Query: 745 ALEKKYGGWLSAKMADLFTDYADFCFKTYGDRVKHWXXFNEPRIVALLGYDTGSNPPQRC 566
LE +YGGWLS + + FT +AD CF+ +GDRV +W +EP + A+ YD G P C
Sbjct: 356 ILEDEYGGWLSPIIVEDFTAFADVCFREFGDRVSYWTTIDEPNVGAMGSYDIGVIAPGHC 535
Query: 565 T 563
+
Sbjct: 536 S 538
Score = 44.1 bits (90), Expect(2) = 9e-036
Identities = 17/26 (65%), Positives = 19/26 (73%)
Frame = -3 / +2
Query: 547 GNSATEPYIVAHNFLLAHATAVARYR 470
G+S EPYI AHN LLAHA+A YR
Sbjct: 569 GDSTVEPYIAAHNMLLAHASAARLYR 646
>gb|BE194623.2|BE194623 HVSMEh0086E10f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0086E10f, mRNA sequence
Length = 819
Score = 124 bits (265), Expect(2) = 2e-035
Identities = 45/95 (47%), Positives = 63/95 (66%)
Frame = -3 / +3
Query: 847 VNPEGVAYXNNLIXYLLQQGXTPYINLYHYDLPLALEKKYGGWLSAKMADLFTDYADFCF 668
VN +G+A+ N+LI ++ +G PY+ L+H+D PL LE KYGG+LS K+ + D+ D C+
Sbjct: 18 VNRQGIAFYNSLINDVIAKGLKPYVTLHHWDTPLGLEDKYGGFLSEKIVKDYVDFTDVCY 197
Query: 667 KTYGDRVKHWXXFNEPRIVALLGYDTGSNPPQRCT 563
+GDRVKHW FNEP + GY TG P RC+
Sbjct: 198 NEFGDRVKHWTTFNEPWTYSTYGYSTGVFAPGRCS 302
Score = 45.5 bits (93), Expect(2) = 2e-035
Identities = 18/26 (69%), Positives = 19/26 (73%)
Frame = -3 / +3
Query: 547 GNSATEPYIVAHNFLLAHATAVARYR 470
G+SA EPYIV HN LL HA VA YR
Sbjct: 330 GDSAREPYIVTHNILLGHAATVALYR 407
>gb|BU997000.1|BU997000 HI06J05r HI Hordeum vulgare subsp. vulgare cDNA clone HI06J05
5-PRIME, mRNA sequence
Length = 655
Score = 148 bits (318), Expect = 4e-035
Identities = 59/120 (49%), Positives = 75/120 (62%)
Frame = -3 / +3
Query: 925 LMKSXXXDXXXFSISXXRIXXDGEXXVNPEGVAYXNNLIXYLLQQGXTPYINLYHYDLPL 746
L+ D FSI+ R+ DG VN +G+ Y NNLI LL+ G P++ +YH+DLP
Sbjct: 294 LLSEMGVDAYRFSIAWPRLIPDGRGAVNAKGLEYYNNLINELLRHGIQPHVTVYHFDLPQ 473
Query: 745 ALEKKYGGWLSAKMADLFTDYADFCFKTYGDRVKHWXXFNEPRIVALLGYDTGSNPPQRC 566
AL+ +Y G LS K D +T YAD CFK +GDRVK+W NEP I + GYD G PPQRC
Sbjct: 474 ALQDEYNGMLSRKFIDDYTVYADVCFKNFGDRVKYWSTLNEPNIEPIGGYDQGFFPPQRC 653
>gb|BQ763070.1|BQ763070 EBro02_SQ007_H01_R root, 3 week, hydroponic grown, low nitrogen, cv
Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone
EBro02_SQ007_H01 5', mRNA sequence
Length = 719
Score = 147 bits (315), Expect = 1e-034
Identities = 57/121 (47%), Positives = 75/121 (61%)
Frame = -3 / +1
Query: 925 LMKSXXXDXXXFSISXXRIXXDGEXXVNPEGVAYXNNLIXYLLQQGXTPYINLYHYDLPL 746
L+ D FSI+ R+ DG VNP+G+ Y NNLI LL G P++ +YH+D P
Sbjct: 304 LLSDMGVDAYRFSIAWPRLIPDGRGAVNPKGLEYYNNLIDELLAHGIQPHVTIYHFDFPQ 483
Query: 745 ALEKKYGGWLSAKMADLFTDYADFCFKTYGDRVKHWXXFNEPRIVALLGYDTGSNPPQRC 566
AL+ +Y G LS K D +T YA+ CFK +GDRVK+W NEP I + GYD G PP+RC
Sbjct: 484 ALQDEYNGMLSRKFVDDYTAYAEVCFKNFGDRVKYWSTVNEPNIEPIGGYDQGILPPRRC 663
Query: 565 T 563
+
Sbjct: 664 S 666
>gb|BQ472678.1|BQ472678 HB01N04r BC Hordeum vulgare subsp. vulgare cDNA clone HB01N04
5-PRIME, mRNA sequence
Length = 700
Score = 118 bits (253), Expect(2) = 2e-034
Identities = 45/89 (50%), Positives = 58/89 (65%)
Frame = -3 / +2
Query: 829 AYXNNLIXYLLQQGXTPYINLYHYDLPLALEKKYGGWLSAKMADLFTDYADFCFKTYGDR 650
A NNLI LL G P++ +YH+D P AL+ +Y G LS K D +T YA+ CFK +GDR
Sbjct: 5 ARGNNLIDELLAHGIQPHVTIYHFDFPQALQDEYNGMLSRKFVDDYTAYAEVCFKNFGDR 184
Query: 649 VKHWXXFNEPRIVALLGYDTGSNPPQRCT 563
VK+W NEP I + GYD G PP+RC+
Sbjct: 185 VKYWSTVNEPNIEPIGGYDQGILPPRRCS 271
Score = 47.8 bits (98), Expect(2) = 2e-034
Identities = 18/26 (69%), Positives = 22/26 (84%)
Frame = -3 / +2
Query: 547 GNSATEPYIVAHNFLLAHATAVARYR 470
GNS TEPYIVAH+ LLAHA+A + Y+
Sbjct: 302 GNSTTEPYIVAHHLLLAHASAASLYK 379
>gb|BQ472621.1|BQ472621 HB01P17r BC Hordeum vulgare subsp. vulgare cDNA clone HB01P17
5-PRIME, mRNA sequence
Length = 585
Score = 118 bits (253), Expect(2) = 2e-034
Identities = 45/89 (50%), Positives = 58/89 (65%)
Frame = -3 / +3
Query: 829 AYXNNLIXYLLQQGXTPYINLYHYDLPLALEKKYGGWLSAKMADLFTDYADFCFKTYGDR 650
A NNLI LL G P++ +YH+D P AL+ +Y G LS K D +T YA+ CFK +GDR
Sbjct: 3 ARGNNLIDELLAHGIQPHVTIYHFDFPQALQDEYNGMLSRKFVDDYTAYAEVCFKNFGDR 182
Query: 649 VKHWXXFNEPRIVALLGYDTGSNPPQRCT 563
VK+W NEP I + GYD G PP+RC+
Sbjct: 183 VKYWSTVNEPNIEPIGGYDQGILPPRRCS 269
Score = 47.8 bits (98), Expect(2) = 2e-034
Identities = 18/26 (69%), Positives = 22/26 (84%)
Frame = -3 / +3
Query: 547 GNSATEPYIVAHNFLLAHATAVARYR 470
GNS TEPYIVAH+ LLAHA+A + Y+
Sbjct: 300 GNSTTEPYIVAHHLLLAHASAASLYK 377
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 396,492,431
Number of Sequences: 312970
Number of extensions: 5950262
Number of successful extensions: 48962
Number of sequences better than 1.0e-020: 147
length of database: 58,378,179
effective HSP length: 52
effective length of database: 42,103,739
effective search space used: 11999565615
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)