TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2750927.2.1
(1331 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AY541067.1| Hordeum vulgare subsp. vulgare AGAMOUS LIKE6... 392 e-129
gb|CK124663.1|CK124663 BES1824109o14 BES1824 Hordeum vulgar... 382 e-105
gb|BU984647.1|BU984647 HF04I23r HF Hordeum vulgare subsp. v... 373 e-103
gb|BU981579.1|BU981579 HA24A15r HA Hordeum vulgare subsp. v... 347 6e-096
gb|BG418830.2|BG418830 HVSMEk0024K11f Hordeum vulgare testa... 283 2e-075
gb|BE193581.2|BE193581 HVSMEh0081M10f Hordeum vulgare 5-45 ... 214 1e-054
emb|AJ249147.1|HVU249147 Hordeum vulgare mRNA for MADS-box ... 131 3e-054
gb|BG418810.1|BG418810 HVSMEk0024I17f Hordeum vulgare testa... 131 3e-054
gb|BU997970.1|BU997970 HI09J04r HI Hordeum vulgare subsp. v... 131 3e-054
gb|CA022102.1|CA022102 HZ42C18r HZ Hordeum vulgare subsp. v... 131 3e-054
gb|AY541068.1| Hordeum vulgare subsp. vulgare AGAMOUS LIKE9... 131 5e-053
gb|CA021239.1|CA021239 HZ39I09r HZ Hordeum vulgare subsp. v... 131 2e-052
emb|AJ249145.1|HVU249145 Hordeum vulgare mRNA for MADS-box ... 120 4e-052
gb|BE456120.2|BE456120 HVSMEg0019N18f Hordeum vulgare pre-a... 120 4e-052
emb|AJ249146.1|HVU249146 Hordeum vulgare mRNA for MADS-box ... 121 1e-051
gb|AY758235.1| Hordeum vulgare subsp. vulgare cultivar Igri... 119 6e-051
gb|AY785825.1| Hordeum vulgare subsp. vulgare cultivar More... 119 6e-051
gb|AY758236.1| Hordeum vulgare subsp. vulgare cultivar Triu... 119 6e-051
gb|AY785826.1| Hordeum vulgare subsp. vulgare cultivar More... 119 6e-051
gb|AY785829.1| Hordeum vulgare subsp. vulgare cultivar Harr... 119 6e-051
gb|AY785827.1| Hordeum vulgare subsp. vulgare cultivar 88Ab... 119 6e-051
gb|AY785828.1| Hordeum vulgare subsp. vulgare cultivar Dick... 119 6e-051
gb|AY785830.1| Hordeum vulgare subsp. vulgare cultivar Stri... 119 6e-051
gb|AY785831.1| Hordeum vulgare subsp. vulgare cultivar Trem... 119 6e-051
gb|AY785833.1| Hordeum vulgare subsp. vulgare cultivar Igri... 119 6e-051
gb|AY785834.1| Hordeum vulgare subsp. vulgare cultivar Nure... 119 6e-051
gb|AY785835.1| Hordeum vulgare subsp. vulgare cultivar Komp... 119 6e-051
gb|AY866486.1| Hordeum vulgare subsp. vulgare cultivar Triu... 119 6e-051
gb|BJ547898.1|BJ547898 BJ547898 K. Sato unpublished cDNA li... 119 6e-051
gb|BI958544.1|BI958544 HVSMEn0015I07f Hordeum vulgare rachi... 119 6e-051
gb|BU997618.1|BU997618 HI08I05r HI Hordeum vulgare subsp. v... 119 6e-051
gb|BI957545.1|BI957545 HVSMEn0010B09f Hordeum vulgare rachi... 119 8e-051
gb|BU975559.1|BU975559 HB31I14r BC Hordeum vulgare subsp. v... 124 2e-050
gb|BJ547783.1|BJ547783 BJ547783 K. Sato unpublished cDNA li... 119 3e-050
gb|BJ547620.1|BJ547620 BJ547620 K. Sato unpublished cDNA li... 119 3e-050
gb|CA022365.1|CA022365 HZ42O13r HZ Hordeum vulgare subsp. v... 122 4e-050
gb|BJ547335.1|BJ547335 BJ547335 K. Sato unpublished cDNA li... 119 6e-050
gb|BU999147.1|BU999147 HI13G17r HI Hordeum vulgare subsp. v... 119 6e-050
gb|BU994410.1|BU994410 HM06P17r HM Hordeum vulgare subsp. v... 119 6e-050
gb|CA023749.1|CA023749 HZ47E18r HZ Hordeum vulgare subsp. v... 113 7e-050
gb|BJ547578.1|BJ547578 BJ547578 K. Sato unpublished cDNA li... 119 1e-049
gb|BJ547327.1|BJ547327 BJ547327 K. Sato unpublished cDNA li... 119 4e-049
gb|BU999601.1|BU999601 HI15A03r HI Hordeum vulgare subsp. v... 119 4e-049
gb|CA032046.1|CA032046 HX11N16r HX Hordeum vulgare subsp. v... 119 4e-049
gb|BU994511.1|BU994511 HM07E21r HM Hordeum vulgare subsp. v... 118 5e-049
emb|AJ249143.1|HVU249143 Hordeum vulgare mRNA for MADS-box ... 117 9e-049
gb|BM097091.2|BM097091 EBpi07_SQ002_F23_R pistil, 12 DPA, n... 116 1e-048
gb|BE195618.2|BE195618 HVSMEh0089O24f Hordeum vulgare 5-45 ... 102 2e-048
emb|AJ249144.1|HVU249144 Hordeum vulgare mRNA for MADS-box ... 111 2e-048
gb|BE193714.2|BE193714 HVSMEh0082E10f Hordeum vulgare 5-45 ... 102 1e-047
gb|BF622888.3|BF622888 HVSMEa0009O05f Hordeum vulgare seedl... 119 8e-047
gb|BU997161.1|BU997161 HI07B21r HI Hordeum vulgare subsp. v... 129 1e-046
gb|CA025884.1|CA025884 HZ53G19r HZ Hordeum vulgare subsp. v... 131 2e-046
gb|CA023382.1|CA023382 HZ46B02r HZ Hordeum vulgare subsp. v... 129 3e-046
gb|CA023514.1|CA023514 HZ46H17r HZ Hordeum vulgare subsp. v... 120 5e-046
gb|BJ547238.1|BJ547238 BJ547238 K. Sato unpublished cDNA li... 108 5e-046
gb|AV933011.1|AV933011 AV933011 K. Sato unpublished cDNA li... 119 5e-046
gb|BJ547546.1|BJ547546 BJ547546 K. Sato unpublished cDNA li... 108 5e-046
gb|AV932867.1|AV932867 AV932867 K. Sato unpublished cDNA li... 119 5e-046
gb|CA021403.1|CA021403 HZ39P24r HZ Hordeum vulgare subsp. v... 119 7e-046
gb|CA024068.1|CA024068 HZ48E09r HZ Hordeum vulgare subsp. v... 129 2e-045
gb|BU999207.1|BU999207 HI13L03r HI Hordeum vulgare subsp. v... 131 2e-045
gb|BU979019.1|BU979019 HA14O21r HA Hordeum vulgare subsp. v... 129 3e-045
gb|BQ462520.1|BQ462520 HI01C12T HI Hordeum vulgare subsp. v... 119 3e-045
gb|BM376225.2|BM376225 EBma01_SQ002_L14_R maternal, 4 DPA, ... 119 3e-045
gb|AL509053.1|AL509053 AL509053 Hordeum vulgare Barke devel... 133 6e-045
gb|BE454695.2|BE454695 HVSMEh0095C18f Hordeum vulgare 5-45 ... 133 9e-045
gb|AL508733.1|AL508733 AL508733 Hordeum vulgare Barke devel... 131 1e-044
gb|BU995060.1|BU995060 HM09B05r HM Hordeum vulgare subsp. v... 95 1e-044
gb|AF486649.1| Hordeum vulgare subsp. vulgare AGAMOUS-like ... 132 1e-044
gb|CA024361.1|CA024361 HZ49B13r HZ Hordeum vulgare subsp. v... 131 1e-044
gb|BU996042.1|BU996042 HM12D17r HM Hordeum vulgare subsp. v... 131 1e-044
gb|CA021258.1|CA021258 HZ39J06r HZ Hordeum vulgare subsp. v... 127 2e-044
gb|BU979487.1|BU979487 HA16F04r HA Hordeum vulgare subsp. v... 129 2e-044
gb|BQ458971.1|BQ458971 HA02K21r HA Hordeum vulgare subsp. v... 129 2e-044
gb|BQ764786.1|BQ764786 EBca01_SQ004_L21_R carpel, pre-anthe... 133 3e-044
gb|BU996265.1|BU996265 HM13B01r HM Hordeum vulgare subsp. v... 133 8e-044
gb|BJ547364.1|BJ547364 BJ547364 K. Sato unpublished cDNA li... 119 8e-044
gb|BJ547239.1|BJ547239 BJ547239 K. Sato unpublished cDNA li... 119 8e-044
gb|CA024629.1|CA024629 HZ49N15r HZ Hordeum vulgare subsp. v... 133 2e-043
gb|BG367358.1|BG367358 HVSMEi0011P20f Hordeum vulgare 20 DA... 133 2e-043
gb|CA025109.1|CA025109 HZ51D19r HZ Hordeum vulgare subsp. v... 119 3e-043
gb|BG418254.2|BG418254 HVSMEk0022B16f Hordeum vulgare testa... 118 7e-043
gb|BG343946.2|BG343946 HVSMEg0007D05f Hordeum vulgare pre-a... 119 1e-042
gb|AL506480.1|AL506480 AL506480 Hordeum vulgare Barke devel... 133 2e-042
gb|CA024291.1|CA024291 HZ48O08r HZ Hordeum vulgare subsp. v... 95 3e-042
gb|BF258470.2|BF258470 HVSMEf0015M23f Hordeum vulgare seedl... 131 4e-041
gb|BJ547237.1|BJ547237 BJ547237 K. Sato unpublished cDNA li... 97 4e-041
gb|BE231150.2|BE231150 HVSMEg0017C04f Hordeum vulgare pre-a... 119 8e-041
gb|CA025584.1|CA025584 HZ52J05r HZ Hordeum vulgare subsp. v... 133 1e-040
gb|BJ547385.1|BJ547385 BJ547385 K. Sato unpublished cDNA li... 119 1e-040
gb|CA025405.1|CA025405 HZ52B05r HZ Hordeum vulgare subsp. v... 133 1e-040
gb|CA025534.1|CA025534 HZ52G24r HZ Hordeum vulgare subsp. v... 133 1e-040
gb|BE454527.3|BE454527 HVSMEh0094C05f Hordeum vulgare 5-45 ... 133 2e-040
gb|AV934186.1|AV934186 AV934186 K. Sato unpublished cDNA li... 119 4e-040
gb|BM374839.1|BM374839 EBma05_SQ003_C14_R maternal, 12 DPA,... 119 4e-040
gb|AV922660.2|AV922660 AV922660 K. Sato unpublished cDNA li... 108 5e-040
gb|BI948062.1|BI948062 HVSMEl0008A23f Hordeum vulgare spike... 124 7e-040
gb|BU996011.1|BU996011 HM12B18r HM Hordeum vulgare subsp. v... 114 1e-039
gb|CA026975.1|CA026975 HZ57I06r HZ Hordeum vulgare subsp. v... 90 2e-039
gb|BU975486.1|BU975486 HB31F02r BC Hordeum vulgare subsp. v... 114 3e-039
gb|AL506894.1|AL506894 AL506894 Hordeum vulgare Barke devel... 133 4e-039
gb|BU973813.1|BU973813 HB26A20r BC Hordeum vulgare subsp. v... 133 4e-039
gb|CA024560.1|CA024560 HZ49K11r HZ Hordeum vulgare subsp. v... 129 4e-039
gb|CA031703.1|CA031703 HX10O06r HX Hordeum vulgare subsp. v... 98 5e-039
gb|AL508019.1|AL508019 AL508019 Hordeum vulgare Barke devel... 133 9e-039
gb|BI776503.2|BI776503 EBpi05_SQ001_K07_R pistil, 8 DPA, no... 101 3e-038
gb|BI956235.1|BI956235 HVSMEn0001F21f Hordeum vulgare rachi... 119 4e-038
gb|CA025113.1|CA025113 HZ51D24r HZ Hordeum vulgare subsp. v... 129 4e-038
gb|BI776993.2|BI776993 EBpi03_SQ001_J15_R pistil, 4 DPA, no... 90 6e-038
gb|BQ462735.1|BQ462735 HI01N16T HI Hordeum vulgare subsp. v... 133 4e-037
gb|CA028663.1|CA028663 HZ62N08r HZ Hordeum vulgare subsp. v... 133 4e-037
gb|CA026169.1|CA026169 HZ55C06r HZ Hordeum vulgare subsp. v... 106 8e-037
gb|AL507763.1|AL507763 AL507763 Hordeum vulgare Barke devel... 133 2e-036
gb|BI948755.1|BI948755 HVSMEl0010L12f Hordeum vulgare spike... 129 4e-036
gb|BG344090.1|BG344090 HVSMEg0007K02f Hordeum vulgare pre-a... 121 9e-036
gb|CA009054.1|CA009054 HU13A17r HU Hordeum vulgare subsp. v... 102 9e-036
gb|CA009157.1|CA009157 HU13F11r HU Hordeum vulgare subsp. v... 102 9e-036
gb|BU973061.1|BU973061 HB23K04r BC Hordeum vulgare subsp. v... 102 9e-036
gb|CA023726.1|CA023726 HZ47D14r HZ Hordeum vulgare subsp. v... 119 1e-035
gb|BQ764751.1|BQ764751 EBca01_SQ004_E21_R carpel, pre-anthe... 103 2e-035
gb|BG417142.1|BG417142 HVSMEk0016H10f Hordeum vulgare testa... 126 3e-035
gb|BU967322.1|BU967322 HB03O23r BC Hordeum vulgare subsp. v... 102 4e-035
gb|BQ459169.1|BQ459169 HA02B21r HA Hordeum vulgare subsp. v... 102 4e-035
gb|BU979626.1|BU979626 HA16M02r HA Hordeum vulgare subsp. v... 103 2e-034
gb|BQ470743.1|BQ470743 HX03O10r HX Hordeum vulgare subsp. v... 111 8e-034
gb|BG417111.1|BG417111 HVSMEk0016F04f Hordeum vulgare testa... 123 8e-034
gb|AY758233.1| Hordeum vulgare subsp. vulgare cultivar More... 119 1e-033
gb|AY750995.1| Hordeum vulgare subsp. vulgare cultivar More... 119 1e-033
emb|AJ249141.1|HVU249141 Hordeum vulgare mRNA for MADS-box ... 98 4e-033
gb|BI957577.1|BI957577 HVSMEn0010D09f Hordeum vulgare rachi... 116 4e-033
gb|CA025481.1|CA025481 HZ52E16r HZ Hordeum vulgare subsp. v... 119 5e-033
gb|BQ463844.1|BQ463844 HG01J20r HG Hordeum vulgare subsp. v... 119 7e-033
gb|AY541065.1| Hordeum vulgare subsp. vulgare APETALA3-like... 105 2e-032
gb|BQ469990.1|BQ469990 HX01H06T HX Hordeum vulgare subsp. v... 96 2e-032
gb|BM096825.2|BM096825 EBma07_SQ001_M14_R maternal, 21 DPA,... 116 3e-032
gb|BI958127.1|BI958127 HVSMEn0013H24f Hordeum vulgare rachi... 96 3e-032
gb|BU979387.1|BU979387 HA15P22r HA Hordeum vulgare subsp. v... 129 6e-032
emb|AJ249142.1|HVU249142 Hordeum vulgare mRNA for MADS-box ... 98 8e-032
gb|BF624256.3|BF624256 HVSMEa0013C13f Hordeum vulgare seedl... 118 8e-032
gb|BU994760.1|BU994760 HM08C02r HM Hordeum vulgare subsp. v... 105 1e-031
gb|AL506475.1|AL506475 AL506475 Hordeum vulgare Barke devel... 136 2e-031
gb|BU995356.1|BU995356 HM09P23r HM Hordeum vulgare subsp. v... 136 2e-031
gb|BU995744.1|BU995744 HM11D17r HM Hordeum vulgare subsp. v... 136 2e-031
gb|BU995877.1|BU995877 HM11K13r HM Hordeum vulgare subsp. v... 136 2e-031
gb|BU998535.1|BU998535 HI11F23r HI Hordeum vulgare subsp. v... 136 2e-031
gb|AF486648.1| Hordeum vulgare subsp. vulgare AGAMOUS-like ... 136 2e-031
gb|BF264447.3|BF264447 HV_CEa0009H05f Hordeum vulgare seedl... 85 1e-030
gb|BU981382.1|BU981382 HA23H05r HA Hordeum vulgare subsp. v... 131 1e-030
gb|BG414586.2|BG414586 HVSMEk0002P16f Hordeum vulgare testa... 133 2e-030
gb|BU969355.1|BU969355 HB11E16r BC Hordeum vulgare subsp. v... 133 2e-030
gb|CA028005.1|CA028005 HZ60L09r HZ Hordeum vulgare subsp. v... 133 2e-030
gb|CA022702.1|CA022702 HZ44B21r HZ Hordeum vulgare subsp. v... 129 3e-030
gb|BU978508.1|BU978508 HA13H01r HA Hordeum vulgare subsp. v... 129 3e-030
gb|CA027865.1|CA027865 HZ60E08r HZ Hordeum vulgare subsp. v... 129 3e-030
gb|BQ758398.1|BQ758398 EBma05_SQ001_L12_R maternal, 12 DPA,... 128 9e-030
gb|BM442374.2|BM442374 EBan01_SQ003_A06_R anther, yellow st... 131 1e-029
gb|CA029142.1|CA029142 HZ64F07r HZ Hordeum vulgare subsp. v... 131 1e-029
gb|BJ543924.1|BJ543924 BJ543924 K. Sato unpublished cDNA li... 99 2e-029
gb|BG414398.1|BG414398 HVSMEk0002B05f Hordeum vulgare testa... 124 4e-029
gb|BE195464.3|BE195464 HVSMEh0089L24f Hordeum vulgare 5-45 ... 127 1e-028
gb|BG415259.2|BG415259 HVSMEk0005M04f Hordeum vulgare testa... 127 1e-028
gb|BU982429.1|BU982429 HA26I11r HA Hordeum vulgare subsp. v... 127 1e-028
gb|BU996044.1|BU996044 HM12D19r HM Hordeum vulgare subsp. v... 109 2e-028
gb|BM442073.2|BM442073 EBan01_SQ002_B20_R anther, yellow st... 100 1e-026
gb|BU979781.1|BU979781 HA17E15r HA Hordeum vulgare subsp. v... 72 1e-026
gb|BM097203.2|BM097203 EBpi07_SQ002_L16_R pistil, 12 DPA, n... 120 2e-026
gb|CK123208.1|CK123208 BES1824102i20 BES1824 Hordeum vulgar... 112 5e-026
gb|BE455888.2|BE455888 HVSMEg0017B20f Hordeum vulgare pre-a... 104 5e-025
gb|BM442365.2|BM442365 EBan01_SQ002_P21_R anther, yellow st... 102 5e-025
gb|AY541066.1| Hordeum vulgare subsp. vulgare PISTILLATA-li... 104 7e-025
gb|BG310152.1|BG310152 HVSMEc0016P20f Hordeum vulgare seedl... 104 7e-025
gb|CK125530.1|CK125530 BES1824108p02 BES1824 Hordeum vulgar... 104 7e-025
gb|CA022292.1|CA022292 HZ42L06r HZ Hordeum vulgare subsp. v... 104 7e-025
gb|BG365393.2|BG365393 HVSMEi0002I08f Hordeum vulgare 20 DA... 113 2e-024
gb|BF627446.2|BF627446 HVSMEb0004O03f Hordeum vulgare seedl... 112 3e-024
gb|BG367455.1|BG367455 HVSMEi0012F04f Hordeum vulgare 20 DA... 112 3e-024
gb|CK124005.1|CK124005 BES1824106h14 BES1824 Hordeum vulgar... 102 5e-024
gb|AL509038.1|AL509038 AL509038 Hordeum vulgare Barke devel... 102 6e-024
gb|BQ462617.1|BQ462617 HI01H19T HI Hordeum vulgare subsp. v... 104 7e-024
gb|BF627401.2|BF627401 HVSMEb0004M05f Hordeum vulgare seedl... 108 6e-023
gb|AV932969.1|AV932969 AV932969 K. Sato unpublished cDNA li... 108 6e-023
gb|BF629182.3|BF629182 HVSMEb0010D12f Hordeum vulgare seedl... 102 2e-022
gb|CA026363.1|CA026363 HZ55L07r HZ Hordeum vulgare subsp. v... 106 2e-022
gb|BU979939.1|BU979939 HA17O10r HA Hordeum vulgare subsp. v... 102 5e-022
gb|BU981281.1|BU981281 HA23C12r HA Hordeum vulgare subsp. v... 105 6e-022
gb|BU997414.1|BU997414 HI07O14r HI Hordeum vulgare subsp. v... 102 7e-022
gb|CA004880.1|CA004880 HS18P07r HS Hordeum vulgare subsp. v... 97 1e-021
gb|BF266152.2|BF266152 HV_CEa0014F03f Hordeum vulgare seedl... 104 1e-021
gb|BU998520.1|BU998520 HI11F04r HI Hordeum vulgare subsp. v... 104 1e-021
gb|CA025681.1|CA025681 HZ52N13r HZ Hordeum vulgare subsp. v... 104 1e-021
gb|CA032371.1|CA032371 HX12N03r HX Hordeum vulgare subsp. v... 104 1e-021
gb|BE194007.3|BE194007 HVSMEh0083F13f Hordeum vulgare 5-45 ... 104 1e-021
gb|BG414969.2|BG414969 HVSMEk0004I01f Hordeum vulgare testa... 104 1e-021
gb|BQ753907.1|BQ753907 EBca01_SQ002_D17_R carpel, pre-anthe... 104 1e-021
gb|CK122890.1|CK122890 BES1824101b13 BES1824 Hordeum vulgar... 104 1e-021
gb|BU981513.1|BU981513 HA23N18r HA Hordeum vulgare subsp. v... 103 2e-021
gb|CA008106.1|CA008106 HU09O17r HU Hordeum vulgare subsp. v... 97 3e-021
gb|BG301340.1|BG301340 HVSMEb0020P03f Hordeum vulgare seedl... 102 5e-021
gb|BE194950.3|BE194950 HVSMEh0087M04f Hordeum vulgare 5-45 ... 102 5e-021
gb|BU995514.1|BU995514 HM10H18r HM Hordeum vulgare subsp. v... 100 1e-020
>gb|AY541067.1| Hordeum vulgare subsp. vulgare AGAMOUS LIKE6-like protein mRNA,
complete cds
Length = 1464
Score = 392 bits (851), Expect(4) = e-129
Identities = 166/177 (93%), Positives = 174/177 (98%)
Frame = +2 / +3
Query: 212 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 391
MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA
Sbjct: 387 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 566
Query: 392 GITKTLERYQHCCYNAQDSNGALSETQSWYQEMSKLRAKFEALQRTQRHLLGEELGPLSV 571
G TKTLERYQHCCYNAQDSNGALSETQSWYQEMSKL+AKFEALQRTQRHLLGE+LGPLSV
Sbjct: 567 GTTKTLERYQHCCYNAQDSNGALSETQSWYQEMSKLKAKFEALQRTQRHLLGEDLGPLSV 746
Query: 572 KELQQLEKQLECALSQARQRKTQLMMEQVEELRRKERHLGEMNRQLKHKLEAEGCSN 742
KELQQLEKQLEC+LSQARQRKTQLMMEQVEELRRKER LG++NRQLKHKL+AEG ++
Sbjct: 747 KELQQLEKQLECSLSQARQRKTQLMMEQVEELRRKERQLGDINRQLKHKLDAEGSNS 917
Score = 281 bits (607), Expect(4) = 1e-090
Identities = 130/177 (73%), Positives = 134/177 (75%)
Frame = -3 / -3
Query: 741 LLQPSASSLCLSCLFISPRCRSFLRSSSTCSIISCVFLCLACDKAHXXXXXXXXXXFTLX 562
LL PSASSLCLSCL +SP RSFLRSSSTCSIISCVF CLACD H FTL
Sbjct: 916 LLLPSASSLCLSCLLMSPS*RSFLRSSSTCSIISCVFRCLACDSEHSSCFSSCCSSFTLS 737
Query: 561 XXXXXXSKCL*VRCKASNFALSFDISWYQL*VSESAPLES*AL*QQCWYLSKVFVMPALP 382
SKCL*VRCKASNFA SFDISWYQL*VS+SAPLES*AL*QQCWYLS VFV+PALP
Sbjct: 736 GPRSSPSKCL*VRCKASNFAFSFDISWYQL*VSDSAPLES*AL*QQCWYLSNVFVVPALP 557
Query: 381 NS*SLPRLEKMMXXXXXXXXXXXXXAFLSRPLRRLEKVTWRLILFSIRLSSTRPLPM 211
NS*SLPRLEKMM AFL RPLRRLEKVT RLILFS+R SST PLPM
Sbjct: 556 NS*SLPRLEKMMSATSASQSTESS*AFLRRPLRRLEKVTCRLILFSMRFSSTLPLPM 386
Score = 247 bits (534), Expect(3) = 3e-080
Identities = 112/179 (62%), Positives = 123/179 (68%)
Frame = +1 / +2
Query: 211 HGEGSS*AQADREQDQPPGHLLQAPQRPAQEXXXXXXXXXXXXXXXXXXQPRQALRVRQR 390
HGEG +A REQDQP GHLLQAPQRP QE QPRQALRVRQR
Sbjct: 386 HGEGKGRTEAHREQDQPAGHLLQAPQRPPQEGLRALRALRRRGGAHHLLQPRQALRVRQR 565
Query: 391 RHNKNFRKVPTLLLQCSRFQWRTL*NSELVPGNVKTEGKIRGLAAHSEALAWGGTWPTEC 570
RHNKN +VPTLLL CSRFQW T+*NSELVPGNVK +GKI AA+SE LAWGG W +
Sbjct: 566 RHNKNIGEVPTLLL*CSRFQWCTI*NSELVPGNVKAKGKI*SFAANSETLAWGGPWTAKR 745
Query: 571 EGVAAARETARMCFVTGKTEKDTTYDGASGRAPQKGATPGRNEQATQTQA*S*RL*QLQ 747
E AAA ETARM VTG+T KD TYDGA G Q+GA+ GR++QATQ QA *R Q Q
Sbjct: 746 ERTAAAGETARMFTVTGQTAKDATYDGAGGGTSQEGASAGRHQQATQAQARR*RQQQQQ 922
Score = 159 bits (342), Expect(4) = 2e-052
Identities = 74/120 (61%), Positives = 83/120 (69%)
Frame = -2 / -2
Query: 571 HTQWAKFLPKQVPLSALQGLEFCPQF*HFLVPALSFRECAIGILSIVAAMLVPF*SFCYX 392
H +K LPKQV LS+LQ +FC *HFLVPALSFR C IGILSI+AA+LVP FC
Sbjct: 746 HA*RSKVLPKQVSLSSLQSFKFCL*L*HFLVPALSFR*CTIGILSIIAAVLVPLQCFCCA 567
Query: 391 XXXXXXXXXXXXXXXERDLGVAEHGELVGLLEQAVAALGEGDLAVDLVLDPLELNSTPPH 212
ER LGVAEHGELVGLLE+AVAALGEGDL VDLVLD L+ + +PPH
Sbjct: 566 GAAELVELAAAGEDDERHLGVAEHGELVGLLEEAVAALGEGDLPVDLVLDALQFDPSPPH 387
Score = 99.1 bits (210), Expect(2) = 3e-029
Identities = 48/73 (65%), Positives = 52/73 (71%)
Frame = -1 / -1
Query: 614 TKHIRAVSLAAATPSHSVGQVPPQASASECAARPRILPSVLTFPGTSSEFQRVRHWNLEH 435
T +I AVS AAA S Q PPQAS SE AA+ +ILP LTFPGTSSEFQ V HWNLEH
Sbjct: 789 TVNILAVSPAAAVLSRLAVQGPPQASVSEFAAKLQILPLALTFPGTSSEFQIVHHWNLEH 610
Query: 434 CSSNVGTFLKFLL 396
SS+VGT FLL
Sbjct: 609 YSSSVGTSPMFLL 571
Score = 86.3 bits (182), Expect(4) = 1e-041
Identities = 38/53 (71%), Positives = 41/53 (77%)
Frame = +3 / +1
Query: 399 QKL*KGTNIAATMLKIPMAHSLKLRAGTRKCQN*GQNSRPCSALRGTCLGRNL 557
QK +GTN AA MLKIPM H LKLRAGTRKCQ+* QN + CS LR TCLGR L
Sbjct: 574 QKHWRGTNTAAIMLKIPMVHYLKLRAGTRKCQS*RQNLKLCSELRDTCLGRTL 732
Score = 66.6 bits (139), Expect(4) = 1e-041
Identities = 27/47 (57%), Positives = 32/47 (68%)
Frame = +3 / +1
Query: 606 VLCHRQDRERHNL*WSKWKSSAERSDTWEK*TGNSNTSLKLKVVATT 746
V CHR D ER NL*WS+W++ A RS +WE TGNS+TS LK T
Sbjct: 781 VHCHRPDSERRNL*WSRWRNFAGRSVSWETSTGNSSTSSTLKAATAT 921
Score = 62.0 bits (129), Expect(4) = e-129
Identities = 25/39 (64%), Positives = 26/39 (66%)
Frame = +2 / +3
Query: 839 SVAMDCEPTLQIGYPPHHQFLPSEAANNIPRSPPGGENN 955
S AMDCEPTLQIGYP H P + ANNIPRS G N
Sbjct: 1035 SAAMDCEPTLQIGYPHHQFAAPDQVANNIPRSSAPGGEN 1151
Score = 54.2 bits (112), Expect(2) = 3e-029
Identities = 23/46 (50%), Positives = 30/46 (65%)
Frame = -2 / -2
Query: 985 SNSKNPSQHEVVLASRGAPWDIIGCLGRQKLVMRRVPDLQSGFTVH 848
S+ P V+ + APW+IIG L R + +M RVP+LQSGFTVH
Sbjct: 1181 SSKNPPQHEVVLPSGGAAPWNIIGYLIRSRELMMRVPNLQSGFTVH 1044
Score = 53.3 bits (110), Expect(4) = 1e-090
Identities = 19/30 (63%), Positives = 23/30 (76%)
Frame = -1 / -1
Query: 932 SLGYYWLPRKAETGDEEGTRFAEWVHSPLQ 843
S+ YYWLP + D+EGT+FAEWVHSP Q
Sbjct: 1128 SVEYYWLPDQEPRTDDEGTQFAEWVHSPSQ 1039
Score = 52.4 bits (108), Expect(3) = 3e-080
Identities = 25/57 (43%), Positives = 33/57 (57%)
Frame = +3 / +1
Query: 765 PGQLPAAPWWSMTAPPIMCIQQLLNRLQWTVNPLCKSGTLLITSFCLPRQPIISQGA 935
P + A P + ++ L+ L+WTVNPLCK GTL+I+S L R PII GA
Sbjct: 961 PSSMKAPPHITCSSSSSSSSSTLIIPLRWTVNPLCKLGTLIISSRLLIR*PIIFHGA 1131
Score = 44.1 bits (90), Expect(4) = 1e-041
Identities = 23/38 (60%), Positives = 25/38 (65%)
Frame = +1 / +2
Query: 835 SIGCNGL*THSANRVPSSSPVSAFRGSQ*YPKEPPWRR 948
S C+GL*THSAN VPSSS + GSQ*Y E RR
Sbjct: 1031 SFRCDGL*THSANWVPSSSVRGS*SGSQ*YSTEQRPRR 1144
Score = 40.9 bits (83), Expect(4) = e-129
Identities = 16/21 (76%), Positives = 17/21 (80%)
Frame = +2 / +3
Query: 932 SPPGGENNFMLGWVL*VALLI 994
S PGGENNFMLGWVL* L+
Sbjct: 1131 SAPGGENNFMLGWVL*AIWLL 1193
Score = 39.1 bits (79), Expect(3) = 3e-080
Identities = 15/22 (68%), Positives = 15/22 (68%)
Frame = +3 / +1
Query: 918 IISQGAPLEARTTSCWDGFFEL 983
I AP E RTTSCW GFFEL
Sbjct: 1117 IFHGAAPPEGRTTSCWGGFFEL 1182
Score = 36.3 bits (73), Expect(4) = 2e-052
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = -3 / -3
Query: 882 GYPICRVGSQSIATD*AVVGC 820
GYPICRVGSQSIA +* C
Sbjct: 1078 GYPICRVGSQSIAAE*LGCCC 1016
Score = 36.3 bits (73), Expect(4) = 1e-090
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = -3 / -3
Query: 990 NRATQRTHPSMKLFSPP 940
++ QRTHPSMKLFSPP
Sbjct: 1189 SQIAQRTHPSMKLFSPP 1139
Score = 35.4 bits (71), Expect(4) = 2e-052
Identities = 15/26 (57%), Positives = 16/26 (61%)
Frame = -1 / -1
Query: 746 CSCYNLQLQACV*VACSFLPGVAPFC 669
C C LQ +AC *VAC LP AP C
Sbjct: 921 CCCCCLQRRACA*VAC*CLPADAPSC 844
Score = 31.8 bits (63), Expect(4) = 2e-052
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -2 / -2
Query: 982 NSKNPSQHEVVLASRGA 932
+SKNP QHEVVL S GA
Sbjct: 1181 SSKNPPQHEVVLPSGGA 1131
Score = 29.9 bits (59), Expect(4) = 1e-041
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +1 / +2
Query: 928 KEPPWRREQLHAGMGSLS 981
++ P R EQLHAG+GSLS
Sbjct: 1127 EQRPRRGEQLHAGVGSLS 1180
Score = 24.9 bits (48), Expect(4) = e-129
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = +2 / +3
Query: 722 EAEGCSNYRTLQHAAWPA 775
E +NYRT+Q W A
Sbjct: 903 EGSNSNNYRTMQQITWAA 956
Score = 22.1 bits (42), Expect(4) = 1e-090
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -3 / -3
Query: 774 AGQAACCRVL*LL 736
A Q CC VL*LL
Sbjct: 955 AAQVICCMVL*LL 917
>gb|CK124663.1|CK124663 BES1824109o14 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010O149 5-PRIME, mRNA sequence
Length = 778
Score = 382 bits (829), Expect = e-105
Identities = 162/173 (93%), Positives = 170/173 (98%)
Frame = +2 / +2
Query: 224 RVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSAGITK 403
RVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSAG TK
Sbjct: 2 RVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSAGTTK 181
Query: 404 TLERYQHCCYNAQDSNGALSETQSWYQEMSKLRAKFEALQRTQRHLLGEELGPLSVKELQ 583
TLERYQHCCYNAQDSNGALSETQSWYQEMSKL+AKFEALQRTQRHLLGE+LGPLSVKELQ
Sbjct: 182 TLERYQHCCYNAQDSNGALSETQSWYQEMSKLKAKFEALQRTQRHLLGEDLGPLSVKELQ 361
Query: 584 QLEKQLECALSQARQRKTQLMMEQVEELRRKERHLGEMNRQLKHKLEAEGCSN 742
QLEKQLEC+LSQARQRKTQLMMEQVEELRRKER LG++NRQLKHKL+AEG ++
Sbjct: 362 QLEKQLECSLSQARQRKTQLMMEQVEELRRKERQLGDINRQLKHKLDAEGSNS 520
Score = 271 bits (586), Expect(2) = 4e-072
Identities = 126/172 (73%), Positives = 130/172 (75%)
Frame = -3 / -2
Query: 741 LLQPSASSLCLSCLFISPRCRSFLRSSSTCSIISCVFLCLACDKAHXXXXXXXXXXFTLX 562
LL PSASSLCLSCL +SP RSFLRSSSTCSIISCVF CLACD H FTL
Sbjct: 519 LLLPSASSLCLSCLLMSPS*RSFLRSSSTCSIISCVFRCLACDSEHSSCFSSCCSSFTLS 340
Query: 561 XXXXXXSKCL*VRCKASNFALSFDISWYQL*VSESAPLES*AL*QQCWYLSKVFVMPALP 382
SKCL*VRCKASNFA SFDISWYQL*VS+SAPLES*AL*QQCWYLS VFV+PALP
Sbjct: 339 GPRSSPSKCL*VRCKASNFAFSFDISWYQL*VSDSAPLES*AL*QQCWYLSNVFVVPALP 160
Query: 381 NS*SLPRLEKMMXXXXXXXXXXXXXAFLSRPLRRLEKVTWRLILFSIRLSST 226
NS*SLPRLEKMM AFL RPLRRLEKVT RLILFS+R SST
Sbjct: 159 NS*SLPRLEKMMSATSASQSTESS*AFLRRPLRRLEKVTCRLILFSMRFSST 4
Score = 237 bits (513), Expect(2) = 1e-062
Identities = 108/171 (63%), Positives = 119/171 (69%)
Frame = +1 / +1
Query: 235 QADREQDQPPGHLLQAPQRPAQEXXXXXXXXXXXXXXXXXXQPRQALRVRQRRHNKNFRK 414
+A REQDQP GHLLQAPQRP QE QPRQALRVRQRRHNKN +
Sbjct: 13 EAHREQDQPAGHLLQAPQRPPQEGLRALRALRRRGGAHHLLQPRQALRVRQRRHNKNIGE 192
Query: 415 VPTLLLQCSRFQWRTL*NSELVPGNVKTEGKIRGLAAHSEALAWGGTWPTECEGVAAARE 594
VPTLLL CSRFQW T+*NSELVPGNVK +GKI AA+SE LAWGG W + E AAA E
Sbjct: 193 VPTLLL*CSRFQWCTI*NSELVPGNVKAKGKI*SFAANSETLAWGGPWTAKRERTAAAGE 372
Query: 595 TARMCFVTGKTEKDTTYDGASGRAPQKGATPGRNEQATQTQA*S*RL*QLQ 747
TARM VTG+T KD TYDGA G Q+GA+ GR++QATQ QA *R Q Q
Sbjct: 373 TARMFTVTGQTAKDATYDGAGGGTSQEGASAGRHQQATQAQARR*RQQQQQ 525
Score = 149 bits (320), Expect(2) = 7e-040
Identities = 71/115 (61%), Positives = 79/115 (68%)
Frame = -2 / -1
Query: 571 HTQWAKFLPKQVPLSALQGLEFCPQF*HFLVPALSFRECAIGILSIVAAMLVPF*SFCYX 392
H +K LPKQV LS+LQ +FC *HFLVPALSFR C IGILSI+AA+LVP FC
Sbjct: 349 HA*RSKVLPKQVSLSSLQSFKFCL*L*HFLVPALSFR*CTIGILSIIAAVLVPLQCFCCA 170
Query: 391 XXXXXXXXXXXXXXXERDLGVAEHGELVGLLEQAVAALGEGDLAVDLVLDPLELN 227
ER LGVAEHGELVGLLE+AVAALGEGDL VDLVLD L+ +
Sbjct: 169 GAAELVELAAAGEDDERHLGVAEHGELVGLLEEAVAALGEGDLPVDLVLDALQFD 5
Score = 86.3 bits (182), Expect(3) = 1e-030
Identities = 38/53 (71%), Positives = 41/53 (77%)
Frame = +3 / +3
Query: 399 QKL*KGTNIAATMLKIPMAHSLKLRAGTRKCQN*GQNSRPCSALRGTCLGRNL 557
QK +GTN AA MLKIPM H LKLRAGTRKCQ+* QN + CS LR TCLGR L
Sbjct: 177 QKHWRGTNTAAIMLKIPMVHYLKLRAGTRKCQS*RQNLKLCSELRDTCLGRTL 335
Score = 66.6 bits (139), Expect(3) = 1e-030
Identities = 27/47 (57%), Positives = 32/47 (68%)
Frame = +3 / +3
Query: 606 VLCHRQDRERHNL*WSKWKSSAERSDTWEK*TGNSNTSLKLKVVATT 746
V CHR D ER NL*WS+W++ A RS +WE TGNS+TS LK T
Sbjct: 384 VHCHRPDSERRNL*WSRWRNFAGRSVSWETSTGNSSTSSTLKAATAT 524
Score = 35.4 bits (71), Expect(2) = 7e-040
Identities = 15/26 (57%), Positives = 16/26 (61%)
Frame = -1 / -3
Query: 746 CSCYNLQLQACV*VACSFLPGVAPFC 669
C C LQ +AC *VAC LP AP C
Sbjct: 524 CCCCCLQRRACA*VAC*CLPADAPSC 447
Score = 24.9 bits (48), Expect(2) = 4e-072
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -3 / -2
Query: 882 GYPICRVG 859
GYPICRVG
Sbjct: 702 GYPICRVG 679
Score = 24.0 bits (46), Expect(3) = 1e-030
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = +2 / +2
Query: 857 EPTLQIGYP 883
+PTLQIGYP
Sbjct: 677 KPTLQIGYP 703
Score = 23.5 bits (45), Expect(2) = 1e-062
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +2 / +1
Query: 827 TTAQSVAMDCEPTLQIGYPPHHQF 898
T S AMDCE P HQF
Sbjct: 646 TPNHSAAMDCETHSANWVPLXHQF 717
>gb|BU984647.1|BU984647 HF04I23r HF Hordeum vulgare subsp. vulgare cDNA clone HF04I23
5-PRIME, mRNA sequence
Length = 649
Score = 373 bits (808), Expect(2) = e-103
Identities = 157/169 (92%), Positives = 166/169 (98%)
Frame = +2 / +2
Query: 236 KRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSAGITKTLER 415
+RIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSAG TKTLER
Sbjct: 8 RRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSAGTTKTLER 187
Query: 416 YQHCCYNAQDSNGALSETQSWYQEMSKLRAKFEALQRTQRHLLGEELGPLSVKELQQLEK 595
YQHCCYNAQDSNGALSETQSWYQEMSKL+AKFEALQRTQRHLLGE+LGPLSVKELQQLEK
Sbjct: 188 YQHCCYNAQDSNGALSETQSWYQEMSKLKAKFEALQRTQRHLLGEDLGPLSVKELQQLEK 367
Query: 596 QLECALSQARQRKTQLMMEQVEELRRKERHLGEMNRQLKHKLEAEGCSN 742
QLEC+LSQARQRKTQLMMEQVEELRRKER LG++NRQLKHKL+AEG ++
Sbjct: 368 QLECSLSQARQRKTQLMMEQVEELRRKERQLGDINRQLKHKLDAEGSNS 514
Score = 267 bits (577), Expect(2) = 4e-071
Identities = 124/169 (73%), Positives = 128/169 (75%)
Frame = -3 / -2
Query: 741 LLQPSASSLCLSCLFISPRCRSFLRSSSTCSIISCVFLCLACDKAHXXXXXXXXXXFTLX 562
LL PSASSLCLSCL +SP RSFLRSSSTCSIISCVF CLACD H FTL
Sbjct: 513 LLLPSASSLCLSCLLMSPS*RSFLRSSSTCSIISCVFRCLACDSEHSSCFSSCCSSFTLS 334
Query: 561 XXXXXXSKCL*VRCKASNFALSFDISWYQL*VSESAPLES*AL*QQCWYLSKVFVMPALP 382
SKCL*VRCKASNFA SFDISWYQL*VS+SAPLES*AL*QQCWYLS VFV+PALP
Sbjct: 333 GPRSSPSKCL*VRCKASNFAFSFDISWYQL*VSDSAPLES*AL*QQCWYLSNVFVVPALP 154
Query: 381 NS*SLPRLEKMMXXXXXXXXXXXXXAFLSRPLRRLEKVTWRLILFSIRL 235
NS*SLPRLEKMM AFL RPLRRLEKVT RLILFS+RL
Sbjct: 153 NS*SLPRLEKMMSATSASQSTESS*AFLRRPLRRLEKVTCRLILFSMRL 7
Score = 237 bits (513), Expect = 8e-062
Identities = 108/171 (63%), Positives = 119/171 (69%)
Frame = +1 / +1
Query: 235 QADREQDQPPGHLLQAPQRPAQEXXXXXXXXXXXXXXXXXXQPRQALRVRQRRHNKNFRK 414
+A REQDQP GHLLQAPQRP QE QPRQALRVRQRRHNKN +
Sbjct: 7 EAHREQDQPAGHLLQAPQRPPQEGLRALRALRRRGGAHHLLQPRQALRVRQRRHNKNIGE 186
Query: 415 VPTLLLQCSRFQWRTL*NSELVPGNVKTEGKIRGLAAHSEALAWGGTWPTECEGVAAARE 594
VPTLLL CSRFQW T+*NSELVPGNVK +GKI AA+SE LAWGG W + E AAA E
Sbjct: 187 VPTLLL*CSRFQWCTI*NSELVPGNVKAKGKI*SFAANSETLAWGGPWTAKRERTAAAGE 366
Query: 595 TARMCFVTGKTEKDTTYDGASGRAPQKGATPGRNEQATQTQA*S*RL*QLQ 747
TARM VTG+T KD TYDGA G Q+GA+ GR++QATQ QA *R Q Q
Sbjct: 367 TARMFTVTGQTAKDATYDGAGGGTSQEGASAGRHQQATQAQARR*RQQQQQ 519
Score = 146 bits (314), Expect(2) = 5e-039
Identities = 70/110 (63%), Positives = 76/110 (69%)
Frame = -2 / -1
Query: 571 HTQWAKFLPKQVPLSALQGLEFCPQF*HFLVPALSFRECAIGILSIVAAMLVPF*SFCYX 392
H +K LPKQV LS+LQ +FC *HFLVPALSFR C IGILSI+AA+LVP FC
Sbjct: 343 HA*RSKVLPKQVSLSSLQSFKFCL*L*HFLVPALSFR*CTIGILSIIAAVLVPLQCFCCA 164
Query: 391 XXXXXXXXXXXXXXXERDLGVAEHGELVGLLEQAVAALGEGDLAVDLVLD 242
ER LGVAEHGELVGLLE+AVAALGEGDL VDLVLD
Sbjct: 163 GAAELVELAAAGEDDERHLGVAEHGELVGLLEEAVAALGEGDLPVDLVLD 14
Score = 86.3 bits (182), Expect(2) = 3e-030
Identities = 38/53 (71%), Positives = 41/53 (77%)
Frame = +3 / +3
Query: 399 QKL*KGTNIAATMLKIPMAHSLKLRAGTRKCQN*GQNSRPCSALRGTCLGRNL 557
QK +GTN AA MLKIPM H LKLRAGTRKCQ+* QN + CS LR TCLGR L
Sbjct: 171 QKHWRGTNTAAIMLKIPMVHYLKLRAGTRKCQS*RQNLKLCSELRDTCLGRTL 329
Score = 66.6 bits (139), Expect(2) = 3e-030
Identities = 27/47 (57%), Positives = 32/47 (68%)
Frame = +3 / +3
Query: 606 VLCHRQDRERHNL*WSKWKSSAERSDTWEK*TGNSNTSLKLKVVATT 746
V CHR D ER NL*WS+W++ A RS +WE TGNS+TS LK T
Sbjct: 378 VHCHRPDSERRNL*WSRWRNFAGRSVSWETSTGNSSTSSTLKAATAT 518
Score = 35.4 bits (71), Expect(2) = 5e-039
Identities = 15/26 (57%), Positives = 16/26 (61%)
Frame = -1 / -3
Query: 746 CSCYNLQLQACV*VACSFLPGVAPFC 669
C C LQ +AC *VAC LP AP C
Sbjct: 518 CCCCCLQRRACA*VAC*CLPADAPSC 441
Score = 24.9 bits (48), Expect(2) = e-103
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = +2 / +2
Query: 722 EAEGCSNYRTLQHAAWPA 775
E +NYRT+Q W A
Sbjct: 500 EGSNSNNYRTMQQITWAA 553
Score = 22.1 bits (42), Expect(2) = 4e-071
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -3 / -2
Query: 774 AGQAACCRVL*LL 736
A Q CC VL*LL
Sbjct: 552 AAQVICCMVL*LL 514
>gb|BU981579.1|BU981579 HA24A15r HA Hordeum vulgare subsp. vulgare cDNA clone HA24A15
5-PRIME, mRNA sequence
Length = 600
Score = 347 bits (752), Expect(2) = 6e-096
Identities = 146/157 (92%), Positives = 154/157 (98%)
Frame = +2 / +3
Query: 272 FSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSAGITKTLERYQHCCYNAQDSN 451
FSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSAG TKTLERYQHCCYNAQDSN
Sbjct: 12 FSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSAGTTKTLERYQHCCYNAQDSN 191
Query: 452 GALSETQSWYQEMSKLRAKFEALQRTQRHLLGEELGPLSVKELQQLEKQLECALSQARQR 631
GALSETQSWYQEMSKL+AKFEALQRTQRHLLGE+LGPLSVKELQQLEKQLEC+LSQARQR
Sbjct: 192 GALSETQSWYQEMSKLKAKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLECSLSQARQR 371
Query: 632 KTQLMMEQVEELRRKERHLGEMNRQLKHKLEAEGCSN 742
KTQLMMEQVEELRRKER LG++NRQLKHKL+AEG ++
Sbjct: 372 KTQLMMEQVEELRRKERQLGDINRQLKHKLDAEGSNS 482
Score = 247 bits (533), Expect(2) = 5e-065
Identities = 114/157 (72%), Positives = 117/157 (74%)
Frame = -3 / -3
Query: 741 LLQPSASSLCLSCLFISPRCRSFLRSSSTCSIISCVFLCLACDKAHXXXXXXXXXXFTLX 562
LL PSASSLCLSCL +SP RSFLRSSSTCSIISCVF CLACD H FTL
Sbjct: 481 LLLPSASSLCLSCLLMSPS*RSFLRSSSTCSIISCVFRCLACDSEHSSCFSSCCSSFTLS 302
Query: 561 XXXXXXSKCL*VRCKASNFALSFDISWYQL*VSESAPLES*AL*QQCWYLSKVFVMPALP 382
SKCL*VRCKASNFA SFDISWYQL*VS+SAPLES*AL*QQCWYLS VFV+PALP
Sbjct: 301 GPRSSPSKCL*VRCKASNFAFSFDISWYQL*VSDSAPLES*AL*QQCWYLSNVFVVPALP 122
Query: 381 NS*SLPRLEKMMXXXXXXXXXXXXXAFLSRPLRRLEK 271
NS*SLPRLEKMM AFL RPLRRLEK
Sbjct: 121 NS*SLPRLEKMMSATSASQSTESS*AFLRRPLRRLEK 11
Score = 214 bits (462), Expect = 8e-055
Identities = 99/159 (62%), Positives = 109/159 (68%)
Frame = +1 / +2
Query: 271 LLQAPQRPAQEXXXXXXXXXXXXXXXXXXQPRQALRVRQRRHNKNFRKVPTLLLQCSRFQ 450
LLQAPQRP QE QPRQALRVRQRRHNKN +VPTLLL CSRFQ
Sbjct: 11 LLQAPQRPPQEGLRALRALRRRGGAHHLLQPRQALRVRQRRHNKNIGEVPTLLL*CSRFQ 190
Query: 451 WRTL*NSELVPGNVKTEGKIRGLAAHSEALAWGGTWPTECEGVAAARETARMCFVTGKTE 630
W T+*NSELVPGNVK +GKI AA+SE LAWGG W + E AAA ETARM VTG+T
Sbjct: 191 WCTI*NSELVPGNVKAKGKI*SFAANSETLAWGGPWTAKRERTAAAGETARMFTVTGQTA 370
Query: 631 KDTTYDGASGRAPQKGATPGRNEQATQTQA*S*RL*QLQ 747
KD TYDGA G Q+GA+ GR++QATQ QA *R Q Q
Sbjct: 371 KDATYDGAGGGTSQEGASAGRHQQATQAQARR*RQQQQQ 487
Score = 127 bits (271), Expect(2) = 4e-033
Identities = 61/100 (61%), Positives = 67/100 (67%)
Frame = -2 / -2
Query: 571 HTQWAKFLPKQVPLSALQGLEFCPQF*HFLVPALSFRECAIGILSIVAAMLVPF*SFCYX 392
H +K LPKQV LS+LQ +FC *HFLVPALSFR C IGILSI+AA+LVP FC
Sbjct: 311 HA*RSKVLPKQVSLSSLQSFKFCL*L*HFLVPALSFR*CTIGILSIIAAVLVPLQCFCCA 132
Query: 391 XXXXXXXXXXXXXXXERDLGVAEHGELVGLLEQAVAALGE 272
ER LGVAEHGELVGLLE+AVAALGE
Sbjct: 131 GAAELVELAAAGEDDERHLGVAEHGELVGLLEEAVAALGE 12
Score = 86.3 bits (182), Expect(2) = 3e-030
Identities = 38/53 (71%), Positives = 41/53 (77%)
Frame = +3 / +1
Query: 399 QKL*KGTNIAATMLKIPMAHSLKLRAGTRKCQN*GQNSRPCSALRGTCLGRNL 557
QK +GTN AA MLKIPM H LKLRAGTRKCQ+* QN + CS LR TCLGR L
Sbjct: 139 QKHWRGTNTAAIMLKIPMVHYLKLRAGTRKCQS*RQNLKLCSELRDTCLGRTL 297
Score = 66.6 bits (139), Expect(2) = 3e-030
Identities = 27/47 (57%), Positives = 32/47 (68%)
Frame = +3 / +1
Query: 606 VLCHRQDRERHNL*WSKWKSSAERSDTWEK*TGNSNTSLKLKVVATT 746
V CHR D ER NL*WS+W++ A RS +WE TGNS+TS LK T
Sbjct: 346 VHCHRPDSERRNL*WSRWRNFAGRSVSWETSTGNSSTSSTLKAATAT 486
Score = 35.4 bits (71), Expect(2) = 4e-033
Identities = 15/26 (57%), Positives = 16/26 (61%)
Frame = -1 / -1
Query: 746 CSCYNLQLQACV*VACSFLPGVAPFC 669
C C LQ +AC *VAC LP AP C
Sbjct: 486 CCCCCLQRRACA*VAC*CLPADAPSC 409
Score = 24.9 bits (48), Expect(2) = 6e-096
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = +2 / +3
Query: 722 EAEGCSNYRTLQHAAWPA 775
E +NYRT+Q W A
Sbjct: 468 EGSNSNNYRTMQQITWAA 521
Score = 22.1 bits (42), Expect(2) = 5e-065
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -3 / -3
Query: 774 AGQAACCRVL*LL 736
A Q CC VL*LL
Sbjct: 520 AAQVICCMVL*LL 482
>gb|BG418830.2|BG418830 HVSMEk0024K11f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0024K11f, mRNA sequence
Length = 885
Score = 283 bits (612), Expect = 2e-075
Identities = 124/149 (83%), Positives = 133/149 (89%)
Frame = +2 / +1
Query: 251 KINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSAGITKTLERYQHCC 430
KINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSAG TKTLERYQHCC
Sbjct: 1 KINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSAGTTKTLERYQHCC 180
Query: 431 YNAQDSNGALSETQSWYQEMSKLRAKFEALQRTQRHLLGEELGPLSVKELQQLEKQLECA 610
YNAQDSNGALSETQSWYQEMSKL+AK EALQRTQRHLLGE+LGP+SVKEL LEKQ+E +
Sbjct: 181 YNAQDSNGALSETQSWYQEMSKLKAKLEALQRTQRHLLGEDLGPVSVKELLVLEKQVEWS 360
Query: 611 LSQARQRKTQLMMEQVEELRRKERHLGEM 697
L QA + T LMME VEEL K+ + +M
Sbjct: 361 LGQAGRGGTLLMMEHVEELF*KDLFVVDM 447
Score = 197 bits (425), Expect = 1e-049
Identities = 97/143 (67%), Positives = 99/143 (69%)
Frame = -3 / -2
Query: 681 RSFLRSSSTCSIISCVFLCLACDKAHXXXXXXXXXXFTLXXXXXXXSKCL*VRCKASNFA 502
RSF SSSTCSIIS V AC H FTL SKCL*VRCKASNFA
Sbjct: 431 RSF*NSSSTCSIISSVPPRPACPSDHSTCFSRTSSSFTLTGPRSSPSKCL*VRCKASNFA 252
Query: 501 LSFDISWYQL*VSESAPLES*AL*QQCWYLSKVFVMPALPNS*SLPRLEKMMXXXXXXXX 322
SFDISWYQL*VS+SAPLES*AL*QQCWYLS VFV+PALPNS*SLPRLEKMM
Sbjct: 251 FSFDISWYQL*VSDSAPLES*AL*QQCWYLSNVFVVPALPNS*SLPRLEKMMSATSASQS 72
Query: 321 XXXXXAFLSRPLRRLEKVTWRLI 253
AFL RPLRRLEKVT RLI
Sbjct: 71 TESS*AFLRRPLRRLEKVTCRLI 3
Score = 182 bits (392), Expect = 4e-045
Identities = 83/148 (56%), Positives = 93/148 (62%)
Frame = +1 / +3
Query: 253 DQPPGHLLQAPQRPAQEXXXXXXXXXXXXXXXXXXQPRQALRVRQRRHNKNFRKVPTLLL 432
DQP GHLLQAPQRP E QPRQALRVRQRRHNKN +VPTLLL
Sbjct: 3 DQPAGHLLQAPQRPP*EGLRALRALRRRGGAHHLLQPRQALRVRQRRHNKNIGEVPTLLL 182
Query: 433 QCSRFQWRTL*NSELVPGNVKTEGKIRGLAAHSEALAWGGTWPTECEGVAAARETARMCF 612
CSRFQW T+*NSELVPGNVK +GKI AA+SE LAWGG W E E A + ET M
Sbjct: 183 *CSRFQWCTI*NSELVPGNVKAKGKIGSFAANSETLAWGGPWTGERERTAGSGETGGMVT 362
Query: 613 VTGKTEKDTTYDGASGRAPQKGATPGRN 696
G+T +D DGA G +G+ GR+
Sbjct: 363 GAGRTGRDAADDGACGGTVLEGSICGRH 446
Score = 140 bits (301), Expect = 1e-032
Identities = 66/107 (61%), Positives = 73/107 (68%)
Frame = -2 / -1
Query: 571 HTQWAKFLPKQVPLSALQGLEFCPQF*HFLVPALSFRECAIGILSIVAAMLVPF*SFCYX 392
H +K LPKQV LS+LQ +FC *HFLVPALSFR C IGILSI+AA+LVP FC
Sbjct: 321 HAHRSKVLPKQVSLSSLQSFQFCL*L*HFLVPALSFR*CTIGILSIIAAVLVPLQCFCCA 142
Query: 391 XXXXXXXXXXXXXXXERDLGVAEHGELVGLLEQAVAALGEGDLAVDL 251
ER LGVAEHGELVGLL++AVAALGEGDL VDL
Sbjct: 141 GAAELVELAAAGEDDERHLGVAEHGELVGLLKEAVAALGEGDLPVDL 1
>gb|BE193581.2|BE193581 HVSMEh0081M10f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0081M10f, mRNA sequence
Length = 750
Score = 214 bits (461), Expect = 1e-054
Identities = 93/171 (54%), Positives = 125/171 (73%)
Frame = +2 / +2
Query: 212 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 391
MGRG+VELKRI+NKI+RQVTF+KRRNGLLKKAYELSVLCDAEVAL+IFSSRG+L+EF ++
Sbjct: 113 MGRGKVELKRIDNKISRQVTFAKRRNGLLKKAYELSVLCDAEVALLIFSSRGRLFEFSTS 292
Query: 392 GITKTLERYQHCCYNAQDSNGALSETQSWYQEMSKLRAKFEALQRTQRHLLGEELGPLSV 571
C ++ S YQE KL+ + E LQ TQR+LLGE+LGPLS+
Sbjct: 293 SCMYKTLERYRSCNLNSEATATPETELSNYQEFLKLKTRVEFLQTTQRNLLGEDLGPLSM 472
Query: 572 KELQQLEKQLECALSQARQRKTQLMMEQVEELRRKERHLGEMNRQLKHKLE 724
KEL+QLE Q+E +L Q R K+Q ++Q+ EL+R+E+ L ++N+ + K++
Sbjct: 473 KELEQLENQIEVSLKQIRGAKSQQSLDQLFELKRREQQLPDVNKDFRKKIQ 625
>emb|AJ249147.1|HVU249147 Hordeum vulgare mRNA for MADS-box protein 9 (m9 gene)
Length = 1140
Score = 131 bits (280), Expect(4) = 3e-054
Identities = 56/60 (93%), Positives = 59/60 (98%)
Frame = +2 / +2
Query: 209 AMGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS 388
AMGRGRVELKRIENKINRQVTF+KRRNGLLKKAYELSVLCDAEVALI+FS+RGKLYEF S
Sbjct: 155 AMGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIVFSNRGKLYEFCS 334
Score = 90.0 bits (190), Expect(4) = 3e-054
Identities = 39/80 (48%), Positives = 57/80 (71%)
Frame = +2 / +2
Query: 485 EMSKLRAKFEALQRTQRHLLGEELGPLSVKELQQLEKQLECALSQARQRKTQLMMEQVEE 664
E KL+ + + LQRTQR+LLGE+L L +KEL+ LEKQL+ +L R +TQ M++Q+ E
Sbjct: 443 EYLKLKTRVDNLQRTQRNLLGEDLDSLGIKELESLEKQLDSSLKHIRTTRTQHMVDQLTE 622
Query: 665 LRRKERHLGEMNRQLKHKLE 724
L+R+E+ E N+ L+ KLE
Sbjct: 623 LQRREQMFSEANKCLRIKLE 682
Score = 25.8 bits (50), Expect(4) = 3e-054
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +2 / +2
Query: 395 ITKTLERYQHCCY 433
+TKTL++YQ C Y
Sbjct: 344 MTKTLDKYQKCSY 382
Score = 22.6 bits (43), Expect(4) = 3e-054
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = +3 / +3
Query: 177 EGRREARDRTSPWGG 221
+GR + R PWGG
Sbjct: 123 QGRWRKQQRRRPWGG 167
>gb|BG418810.1|BG418810 HVSMEk0024I17f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0024I17f, mRNA sequence
Length = 862
Score = 131 bits (280), Expect(4) = 3e-054
Identities = 56/60 (93%), Positives = 59/60 (98%)
Frame = +2 / +2
Query: 209 AMGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS 388
AMGRGRVELKRIENKINRQVTF+KRRNGLLKKAYELSVLCDAEVALI+FS+RGKLYEF S
Sbjct: 59 AMGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIVFSNRGKLYEFCS 238
Score = 90.0 bits (190), Expect(4) = 3e-054
Identities = 39/80 (48%), Positives = 57/80 (71%)
Frame = +2 / +2
Query: 485 EMSKLRAKFEALQRTQRHLLGEELGPLSVKELQQLEKQLECALSQARQRKTQLMMEQVEE 664
E KL+ + + LQRTQR+LLGE+L L +KEL+ LEKQL+ +L R +TQ M++Q+ E
Sbjct: 347 EYLKLKTRVDNLQRTQRNLLGEDLDSLGIKELESLEKQLDSSLKHIRTTRTQHMVDQLTE 526
Query: 665 LRRKERHLGEMNRQLKHKLE 724
L+R+E+ E N+ L+ KLE
Sbjct: 527 LQRREQMFSEANKCLRIKLE 586
Score = 25.8 bits (50), Expect(4) = 3e-054
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +2 / +2
Query: 395 ITKTLERYQHCCY 433
+TKTL++YQ C Y
Sbjct: 248 MTKTLDKYQKCSY 286
Score = 22.6 bits (43), Expect(4) = 3e-054
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = +3 / +3
Query: 177 EGRREARDRTSPWGG 221
+GR + R PWGG
Sbjct: 27 QGRWRKQQRRRPWGG 71
>gb|BU997970.1|BU997970 HI09J04r HI Hordeum vulgare subsp. vulgare cDNA clone HI09J04
5-PRIME, mRNA sequence
Length = 675
Score = 131 bits (280), Expect(4) = 3e-054
Identities = 56/60 (93%), Positives = 59/60 (98%)
Frame = +2 / +3
Query: 209 AMGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS 388
AMGRGRVELKRIENKINRQVTF+KRRNGLLKKAYELSVLCDAEVALI+FS+RGKLYEF S
Sbjct: 81 AMGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIVFSNRGKLYEFCS 260
Score = 90.0 bits (190), Expect(4) = 3e-054
Identities = 39/80 (48%), Positives = 57/80 (71%)
Frame = +2 / +3
Query: 485 EMSKLRAKFEALQRTQRHLLGEELGPLSVKELQQLEKQLECALSQARQRKTQLMMEQVEE 664
E KL+ + + LQRTQR+LLGE+L L +KEL+ LEKQL+ +L R +TQ M++Q+ E
Sbjct: 369 EYLKLKTRVDNLQRTQRNLLGEDLDSLGIKELESLEKQLDSSLKHIRTTRTQHMVDQLTE 548
Query: 665 LRRKERHLGEMNRQLKHKLE 724
L+R+E+ E N+ L+ KLE
Sbjct: 549 LQRREQMFSEANKCLRIKLE 608
Score = 25.8 bits (50), Expect(4) = 3e-054
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +2 / +3
Query: 395 ITKTLERYQHCCY 433
+TKTL++YQ C Y
Sbjct: 270 MTKTLDKYQKCSY 308
Score = 22.6 bits (43), Expect(4) = 3e-054
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = +3 / +1
Query: 177 EGRREARDRTSPWGG 221
+GR + R PWGG
Sbjct: 49 QGRWRKQQRRRPWGG 93
>gb|CA022102.1|CA022102 HZ42C18r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ42C18
5-PRIME, mRNA sequence
Length = 652
Score = 131 bits (280), Expect(4) = 3e-054
Identities = 56/60 (93%), Positives = 59/60 (98%)
Frame = +2 / +3
Query: 209 AMGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS 388
AMGRGRVELKRIENKINRQVTF+KRRNGLLKKAYELSVLCDAEVALI+FS+RGKLYEF S
Sbjct: 69 AMGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIVFSNRGKLYEFCS 248
Score = 90.0 bits (190), Expect(4) = 3e-054
Identities = 39/80 (48%), Positives = 57/80 (71%)
Frame = +2 / +3
Query: 485 EMSKLRAKFEALQRTQRHLLGEELGPLSVKELQQLEKQLECALSQARQRKTQLMMEQVEE 664
E KL+ + + LQRTQR+LLGE+L L +KEL+ LEKQL+ +L R +TQ M++Q+ E
Sbjct: 357 EYLKLKTRVDNLQRTQRNLLGEDLDSLGIKELESLEKQLDSSLKHIRTTRTQHMVDQLTE 536
Query: 665 LRRKERHLGEMNRQLKHKLE 724
L+R+E+ E N+ L+ KLE
Sbjct: 537 LQRREQMFSEANKCLRIKLE 596
Score = 25.8 bits (50), Expect(4) = 3e-054
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +2 / +3
Query: 395 ITKTLERYQHCCY 433
+TKTL++YQ C Y
Sbjct: 258 MTKTLDKYQKCSY 296
Score = 22.6 bits (43), Expect(4) = 3e-054
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = +3 / +1
Query: 177 EGRREARDRTSPWGG 221
+GR + R PWGG
Sbjct: 37 QGRWRKQQRRRPWGG 81
>gb|AY541068.1| Hordeum vulgare subsp. vulgare AGAMOUS LIKE9-like protein mRNA,
complete cds
Length = 1099
Score = 131 bits (280), Expect(4) = 5e-053
Identities = 56/60 (93%), Positives = 59/60 (98%)
Frame = +2 / +2
Query: 209 AMGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS 388
AMGRGRVELKRIENKINRQVTF+KRRNGLLKKAYELSVLCDAEVALI+FS+RGKLYEF S
Sbjct: 59 AMGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIVFSNRGKLYEFCS 238
Score = 90.0 bits (190), Expect(4) = 5e-053
Identities = 39/80 (48%), Positives = 57/80 (71%)
Frame = +2 / +2
Query: 485 EMSKLRAKFEALQRTQRHLLGEELGPLSVKELQQLEKQLECALSQARQRKTQLMMEQVEE 664
E KL+ + + LQRTQR+LLGE+L L +KEL+ LEKQL+ +L R +TQ M++Q+ E
Sbjct: 347 EYLKLKTRVDNLQRTQRNLLGEDLDSLGIKELESLEKQLDSSLKHIRTTRTQHMVDQLTE 526
Query: 665 LRRKERHLGEMNRQLKHKLE 724
L+R+E+ E N+ L+ KLE
Sbjct: 527 LQRREQMFSEANKCLRIKLE 586
Score = 26.7 bits (52), Expect(4) = 5e-053
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +2 / +2
Query: 857 EPTLQIGYPP 886
EPTL IGYPP
Sbjct: 719 EPTLHIGYPP 748
Score = 25.8 bits (50), Expect(4) = 5e-053
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +2 / +2
Query: 395 ITKTLERYQHCCY 433
+TKTL++YQ C Y
Sbjct: 248 MTKTLDKYQKCSY 286
>gb|CA021239.1|CA021239 HZ39I09r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ39I09
5-PRIME, mRNA sequence
Length = 654
Score = 131 bits (280), Expect(4) = 2e-052
Identities = 56/60 (93%), Positives = 59/60 (98%)
Frame = +2 / +2
Query: 209 AMGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS 388
AMGRGRVELKRIENKINRQVTF+KRRNGLLKKAYELSVLCDAEVALI+FS+RGKLYEF S
Sbjct: 146 AMGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIVFSNRGKLYEFCS 325
Score = 83.5 bits (176), Expect(4) = 2e-052
Identities = 35/73 (47%), Positives = 52/73 (71%)
Frame = +2 / +2
Query: 485 EMSKLRAKFEALQRTQRHLLGEELGPLSVKELQQLEKQLECALSQARQRKTQLMMEQVEE 664
E KL+ + + LQRTQR+LLGE+L L +KEL+ LEKQL+ +L R +TQ M++Q+ E
Sbjct: 434 EYLKLKTRVDNLQRTQRNLLGEDLDSLGIKELESLEKQLDSSLKHIRTTRTQHMVDQLTE 613
Query: 665 LRRKERHLGEMNR 703
L+R+E+ E N+
Sbjct: 614 LQRREQMFSEANK 652
Score = 25.8 bits (50), Expect(4) = 2e-052
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +2 / +2
Query: 395 ITKTLERYQHCCY 433
+TKTL++YQ C Y
Sbjct: 335 MTKTLDKYQKCSY 373
Score = 22.6 bits (43), Expect(4) = 2e-052
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = +3 / +3
Query: 177 EGRREARDRTSPWGG 221
+GR + R PWGG
Sbjct: 114 QGRWRKQQRRRPWGG 158
>emb|AJ249145.1|HVU249145 Hordeum vulgare mRNA for MADS-box protein 7 (m7 gene)
Length = 984
Score = 120 bits (257), Expect(3) = 4e-052
Identities = 49/60 (81%), Positives = 58/60 (96%)
Frame = +2 / +2
Query: 212 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 391
MGRG+VE++RIENKI+RQVTF+KRRNGLLKKAYELS+LCDAEVALIIFS RG+L+EF S+
Sbjct: 68 MGRGKVEMRRIENKISRQVTFAKRRNGLLKKAYELSLLCDAEVALIIFSGRGRLFEFSSS 247
Score = 98.2 bits (208), Expect(3) = 4e-052
Identities = 39/87 (44%), Positives = 63/87 (72%)
Frame = +2 / +2
Query: 464 ETQSWYQEMSKLRAKFEALQRTQRHLLGEELGPLSVKELQQLEKQLECALSQARQRKTQL 643
E + YQE KL+ + E LQ +QR++LGE+LGPLS+KEL Q+E Q++ +L R +K Q+
Sbjct: 320 ENEINYQEYLKLKTRVEFLQSSQRNILGEDLGPLSMKELDQIENQIDASLQHIRSKKNQV 499
Query: 644 MMEQVEELRRKERHLGEMNRQLKHKLE 724
+++Q+ EL+ KE+ L + N+ L+ KL+
Sbjct: 500 LLDQLFELKSKEQELQDENKDLRKKLQ 580
Score = 25.8 bits (50), Expect(3) = 4e-052
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +2 / +2
Query: 386 SAGITKTLERYQHCCYNAQDS 448
S+ + KTLERY+ C N+Q++
Sbjct: 245 SSCMYKTLERYRTCNSNSQEA 307
>gb|BE456120.2|BE456120 HVSMEg0019N18f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0019N18f, mRNA sequence
Length = 872
Score = 120 bits (257), Expect(3) = 4e-052
Identities = 49/60 (81%), Positives = 58/60 (96%)
Frame = +2 / +3
Query: 212 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 391
MGRG+VE++RIENKI+RQVTF+KRRNGLLKKAYELS+LCDAEVALIIFS RG+L+EF S+
Sbjct: 6 MGRGKVEMRRIENKISRQVTFAKRRNGLLKKAYELSLLCDAEVALIIFSGRGRLFEFSSS 185
Score = 98.2 bits (208), Expect(3) = 4e-052
Identities = 39/87 (44%), Positives = 63/87 (72%)
Frame = +2 / +3
Query: 464 ETQSWYQEMSKLRAKFEALQRTQRHLLGEELGPLSVKELQQLEKQLECALSQARQRKTQL 643
E + YQE KL+ + E LQ +QR++LGE+LGPLS+KEL Q+E Q++ +L R +K Q+
Sbjct: 258 ENEINYQEYLKLKTRVEFLQSSQRNILGEDLGPLSMKELDQIENQIDASLQHIRSKKNQV 437
Query: 644 MMEQVEELRRKERHLGEMNRQLKHKLE 724
+++Q+ EL+ KE+ L + N+ L+ KL+
Sbjct: 438 LLDQLFELKSKEQELQDENKDLRKKLQ 518
Score = 25.8 bits (50), Expect(3) = 4e-052
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +2 / +3
Query: 386 SAGITKTLERYQHCCYNAQDS 448
S+ + KTLERY+ C N+Q++
Sbjct: 183 SSCMYKTLERYRTCNSNSQEA 245
>emb|AJ249146.1|HVU249146 Hordeum vulgare mRNA for MADS-box protein 8 (m8 gene)
Length = 1203
Score = 121 bits (258), Expect(2) = 1e-051
Identities = 48/61 (78%), Positives = 58/61 (95%)
Frame = +2 / +1
Query: 206 VAMGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFG 385
+ MGRG+V+LKRIENKINRQVTFSKRRNGLLKKA+E+SVLCDAEVA+I+FS +GKLYE+
Sbjct: 37 IGMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYEYA 216
Query: 386 S 388
+
Sbjct: 217 T 219
Score = 103 bits (219), Expect(2) = 1e-051
Identities = 42/83 (50%), Positives = 60/83 (72%)
Frame = +2 / +1
Query: 473 SWYQEMSKLRAKFEALQRTQRHLLGEELGPLSVKELQQLEKQLECALSQARQRKTQLMME 652
+W E KL+AK E +Q+ +HL+GE+L L++KELQQLE+QLE +L R RK+ LMME
Sbjct: 310 NWCHEYRKLKAKIETIQKCHKHLMGEDLDSLNLKELQQLEQQLESSLKHIRSRKSHLMME 489
Query: 653 QVEELRRKERHLGEMNRQLKHKL 721
+ EL++KER L E N+ L+ +L
Sbjct: 490 SISELQKKERSLQEENKALQKEL 558
>gb|AY758235.1| Hordeum vulgare subsp. vulgare cultivar Igri BM5a mRNA, complete
cds
Length = 1153
Score = 119 bits (255), Expect(2) = 6e-051
Identities = 49/59 (83%), Positives = 57/59 (96%)
Frame = +2 / +2
Query: 212 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS 388
MGRG+V+LKRIENKINRQVTFSKRR+GLLKKA+E+SVLCDAEV LIIFS++GKLYEF +
Sbjct: 131 MGRGKVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIIFSTKGKLYEFST 307
Score = 102 bits (217), Expect(2) = 6e-051
Identities = 43/83 (51%), Positives = 60/83 (72%)
Frame = +2 / +2
Query: 473 SWYQEMSKLRAKFEALQRTQRHLLGEELGPLSVKELQQLEKQLECALSQARQRKTQLMME 652
+W E KL+AK E +Q+ Q+HL+GE+L L++KELQQLE+QLE +L R RK QLM E
Sbjct: 398 NWCHEYRKLKAKVETIQKCQKHLMGEDLESLNLKELQQLEQQLESSLKHIRARKNQLMHE 577
Query: 653 QVEELRRKERHLGEMNRQLKHKL 721
+ EL++KER L E N+ L+ +L
Sbjct: 578 SISELQKKERSLQEENKVLQKEL 646
>gb|AY785825.1| Hordeum vulgare subsp. vulgare cultivar Morex MADS-box protein
HvBM5A (BM5A) mRNA, complete cds
Length = 1151
Score = 119 bits (255), Expect(2) = 6e-051
Identities = 49/59 (83%), Positives = 57/59 (96%)
Frame = +2 / +3
Query: 212 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS 388
MGRG+V+LKRIENKINRQVTFSKRR+GLLKKA+E+SVLCDAEV LIIFS++GKLYEF +
Sbjct: 135 MGRGKVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIIFSTKGKLYEFST 311
Score = 102 bits (217), Expect(2) = 6e-051
Identities = 43/83 (51%), Positives = 60/83 (72%)
Frame = +2 / +3
Query: 473 SWYQEMSKLRAKFEALQRTQRHLLGEELGPLSVKELQQLEKQLECALSQARQRKTQLMME 652
+W E KL+AK E +Q+ Q+HL+GE+L L++KELQQLE+QLE +L R RK QLM E
Sbjct: 402 NWCHEYRKLKAKVETIQKCQKHLMGEDLESLNLKELQQLEQQLESSLKHIRARKNQLMHE 581
Query: 653 QVEELRRKERHLGEMNRQLKHKL 721
+ EL++KER L E N+ L+ +L
Sbjct: 582 SISELQKKERSLQEENKVLQKEL 650
>gb|AY758236.1| Hordeum vulgare subsp. vulgare cultivar Triumph BM5a mRNA, complete
cds
Length = 1145
Score = 119 bits (255), Expect(2) = 6e-051
Identities = 49/59 (83%), Positives = 57/59 (96%)
Frame = +2 / +3
Query: 212 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS 388
MGRG+V+LKRIENKINRQVTFSKRR+GLLKKA+E+SVLCDAEV LIIFS++GKLYEF +
Sbjct: 123 MGRGKVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIIFSTKGKLYEFST 299
Score = 102 bits (217), Expect(2) = 6e-051
Identities = 43/83 (51%), Positives = 60/83 (72%)
Frame = +2 / +3
Query: 473 SWYQEMSKLRAKFEALQRTQRHLLGEELGPLSVKELQQLEKQLECALSQARQRKTQLMME 652
+W E KL+AK E +Q+ Q+HL+GE+L L++KELQQLE+QLE +L R RK QLM E
Sbjct: 390 NWCHEYRKLKAKVETIQKCQKHLMGEDLESLNLKELQQLEQQLESSLKHIRARKNQLMHE 569
Query: 653 QVEELRRKERHLGEMNRQLKHKL 721
+ EL++KER L E N+ L+ +L
Sbjct: 570 SISELQKKERSLQEENKVLQKEL 638
>gb|AY785826.1| Hordeum vulgare subsp. vulgare cultivar Morex MADS-box protein
HvBM5A (BM5A) mRNA, complete cds
Length = 1117
Score = 119 bits (255), Expect(2) = 6e-051
Identities = 49/59 (83%), Positives = 57/59 (96%)
Frame = +2 / +3
Query: 212 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS 388
MGRG+V+LKRIENKINRQVTFSKRR+GLLKKA+E+SVLCDAEV LIIFS++GKLYEF +
Sbjct: 102 MGRGKVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIIFSTKGKLYEFST 278
Score = 102 bits (217), Expect(2) = 6e-051
Identities = 43/83 (51%), Positives = 60/83 (72%)
Frame = +2 / +3
Query: 473 SWYQEMSKLRAKFEALQRTQRHLLGEELGPLSVKELQQLEKQLECALSQARQRKTQLMME 652
+W E KL+AK E +Q+ Q+HL+GE+L L++KELQQLE+QLE +L R RK QLM E
Sbjct: 369 NWCHEYRKLKAKVETIQKCQKHLMGEDLESLNLKELQQLEQQLESSLKHIRARKNQLMHE 548
Query: 653 QVEELRRKERHLGEMNRQLKHKL 721
+ EL++KER L E N+ L+ +L
Sbjct: 549 SISELQKKERSLQEENKVLQKEL 617
>gb|AY785829.1| Hordeum vulgare subsp. vulgare cultivar Harrington MADS-box protein
HvBM5A (BM5A) mRNA, complete cds
Length = 1117
Score = 119 bits (255), Expect(2) = 6e-051
Identities = 49/59 (83%), Positives = 57/59 (96%)
Frame = +2 / +3
Query: 212 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS 388
MGRG+V+LKRIENKINRQVTFSKRR+GLLKKA+E+SVLCDAEV LIIFS++GKLYEF +
Sbjct: 102 MGRGKVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIIFSTKGKLYEFST 278
Score = 102 bits (217), Expect(2) = 6e-051
Identities = 43/83 (51%), Positives = 60/83 (72%)
Frame = +2 / +3
Query: 473 SWYQEMSKLRAKFEALQRTQRHLLGEELGPLSVKELQQLEKQLECALSQARQRKTQLMME 652
+W E KL+AK E +Q+ Q+HL+GE+L L++KELQQLE+QLE +L R RK QLM E
Sbjct: 369 NWCHEYRKLKAKVETIQKCQKHLMGEDLESLNLKELQQLEQQLESSLKHIRARKNQLMHE 548
Query: 653 QVEELRRKERHLGEMNRQLKHKL 721
+ EL++KER L E N+ L+ +L
Sbjct: 549 SISELQKKERSLQEENKVLQKEL 617
>gb|AY785827.1| Hordeum vulgare subsp. vulgare cultivar 88Ab536 MADS-box protein
HvBM5A (BM5A) mRNA, complete cds
Length = 1113
Score = 119 bits (255), Expect(2) = 6e-051
Identities = 49/59 (83%), Positives = 57/59 (96%)
Frame = +2 / +2
Query: 212 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS 388
MGRG+V+LKRIENKINRQVTFSKRR+GLLKKA+E+SVLCDAEV LIIFS++GKLYEF +
Sbjct: 98 MGRGKVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIIFSTKGKLYEFST 274
Score = 102 bits (217), Expect(2) = 6e-051
Identities = 43/83 (51%), Positives = 60/83 (72%)
Frame = +2 / +2
Query: 473 SWYQEMSKLRAKFEALQRTQRHLLGEELGPLSVKELQQLEKQLECALSQARQRKTQLMME 652
+W E KL+AK E +Q+ Q+HL+GE+L L++KELQQLE+QLE +L R RK QLM E
Sbjct: 365 NWCHEYRKLKAKVETIQKCQKHLMGEDLESLNLKELQQLEQQLESSLKHIRARKNQLMHE 544
Query: 653 QVEELRRKERHLGEMNRQLKHKL 721
+ EL++KER L E N+ L+ +L
Sbjct: 545 SISELQKKERSLQEENKVLQKEL 613
>gb|AY785828.1| Hordeum vulgare subsp. vulgare cultivar Dicktoo MADS-box protein
HvBM5A (BM5A) mRNA, complete cds
Length = 1113
Score = 119 bits (255), Expect(2) = 6e-051
Identities = 49/59 (83%), Positives = 57/59 (96%)
Frame = +2 / +2
Query: 212 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS 388
MGRG+V+LKRIENKINRQVTFSKRR+GLLKKA+E+SVLCDAEV LIIFS++GKLYEF +
Sbjct: 98 MGRGKVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIIFSTKGKLYEFST 274
Score = 102 bits (217), Expect(2) = 6e-051
Identities = 43/83 (51%), Positives = 60/83 (72%)
Frame = +2 / +2
Query: 473 SWYQEMSKLRAKFEALQRTQRHLLGEELGPLSVKELQQLEKQLECALSQARQRKTQLMME 652
+W E KL+AK E +Q+ Q+HL+GE+L L++KELQQLE+QLE +L R RK QLM E
Sbjct: 365 NWCHEYRKLKAKVETIQKCQKHLMGEDLESLNLKELQQLEQQLESSLKHIRARKNQLMHE 544
Query: 653 QVEELRRKERHLGEMNRQLKHKL 721
+ EL++KER L E N+ L+ +L
Sbjct: 545 SISELQKKERSLQEENKVLQKEL 613
>gb|AY785830.1| Hordeum vulgare subsp. vulgare cultivar Strider MADS-box protein
HvBM5A (BM5A) mRNA, complete cds
Length = 1113
Score = 119 bits (255), Expect(2) = 6e-051
Identities = 49/59 (83%), Positives = 57/59 (96%)
Frame = +2 / +2
Query: 212 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS 388
MGRG+V+LKRIENKINRQVTFSKRR+GLLKKA+E+SVLCDAEV LIIFS++GKLYEF +
Sbjct: 98 MGRGKVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIIFSTKGKLYEFST 274
Score = 102 bits (217), Expect(2) = 6e-051
Identities = 43/83 (51%), Positives = 60/83 (72%)
Frame = +2 / +2
Query: 473 SWYQEMSKLRAKFEALQRTQRHLLGEELGPLSVKELQQLEKQLECALSQARQRKTQLMME 652
+W E KL+AK E +Q+ Q+HL+GE+L L++KELQQLE+QLE +L R RK QLM E
Sbjct: 365 NWCHEYRKLKAKVETIQKCQKHLMGEDLESLNLKELQQLEQQLESSLKHIRARKNQLMHE 544
Query: 653 QVEELRRKERHLGEMNRQLKHKL 721
+ EL++KER L E N+ L+ +L
Sbjct: 545 SISELQKKERSLQEENKVLQKEL 613
>gb|AY785831.1| Hordeum vulgare subsp. vulgare cultivar Tremois MADS-box protein
HvBM5A (BM5A) mRNA, complete cds
Length = 1113
Score = 119 bits (255), Expect(2) = 6e-051
Identities = 49/59 (83%), Positives = 57/59 (96%)
Frame = +2 / +2
Query: 212 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS 388
MGRG+V+LKRIENKINRQVTFSKRR+GLLKKA+E+SVLCDAEV LIIFS++GKLYEF +
Sbjct: 98 MGRGKVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIIFSTKGKLYEFST 274
Score = 102 bits (217), Expect(2) = 6e-051
Identities = 43/83 (51%), Positives = 60/83 (72%)
Frame = +2 / +2
Query: 473 SWYQEMSKLRAKFEALQRTQRHLLGEELGPLSVKELQQLEKQLECALSQARQRKTQLMME 652
+W E KL+AK E +Q+ Q+HL+GE+L L++KELQQLE+QLE +L R RK QLM E
Sbjct: 365 NWCHEYRKLKAKVETIQKCQKHLMGEDLESLNLKELQQLEQQLESSLKHIRARKNQLMHE 544
Query: 653 QVEELRRKERHLGEMNRQLKHKL 721
+ EL++KER L E N+ L+ +L
Sbjct: 545 SISELQKKERSLQEENKVLQKEL 613
>gb|AY785833.1| Hordeum vulgare subsp. vulgare cultivar Igri MADS-box protein
HvBM5A (BM5A) mRNA, complete cds
Length = 1113
Score = 119 bits (255), Expect(2) = 6e-051
Identities = 49/59 (83%), Positives = 57/59 (96%)
Frame = +2 / +2
Query: 212 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS 388
MGRG+V+LKRIENKINRQVTFSKRR+GLLKKA+E+SVLCDAEV LIIFS++GKLYEF +
Sbjct: 98 MGRGKVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIIFSTKGKLYEFST 274
Score = 102 bits (217), Expect(2) = 6e-051
Identities = 43/83 (51%), Positives = 60/83 (72%)
Frame = +2 / +2
Query: 473 SWYQEMSKLRAKFEALQRTQRHLLGEELGPLSVKELQQLEKQLECALSQARQRKTQLMME 652
+W E KL+AK E +Q+ Q+HL+GE+L L++KELQQLE+QLE +L R RK QLM E
Sbjct: 365 NWCHEYRKLKAKVETIQKCQKHLMGEDLESLNLKELQQLEQQLESSLKHIRARKNQLMHE 544
Query: 653 QVEELRRKERHLGEMNRQLKHKL 721
+ EL++KER L E N+ L+ +L
Sbjct: 545 SISELQKKERSLQEENKVLQKEL 613
>gb|AY785834.1| Hordeum vulgare subsp. vulgare cultivar Nure MADS-box protein
HvBM5A (BM5A) mRNA, complete cds
Length = 1113
Score = 119 bits (255), Expect(2) = 6e-051
Identities = 49/59 (83%), Positives = 57/59 (96%)
Frame = +2 / +2
Query: 212 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS 388
MGRG+V+LKRIENKINRQVTFSKRR+GLLKKA+E+SVLCDAEV LIIFS++GKLYEF +
Sbjct: 98 MGRGKVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIIFSTKGKLYEFST 274
Score = 102 bits (217), Expect(2) = 6e-051
Identities = 43/83 (51%), Positives = 60/83 (72%)
Frame = +2 / +2
Query: 473 SWYQEMSKLRAKFEALQRTQRHLLGEELGPLSVKELQQLEKQLECALSQARQRKTQLMME 652
+W E KL+AK E +Q+ Q+HL+GE+L L++KELQQLE+QLE +L R RK QLM E
Sbjct: 365 NWCHEYRKLKAKVETIQKCQKHLMGEDLESLNLKELQQLEQQLESSLKHIRARKNQLMHE 544
Query: 653 QVEELRRKERHLGEMNRQLKHKL 721
+ EL++KER L E N+ L+ +L
Sbjct: 545 SISELQKKERSLQEENKVLQKEL 613
>gb|AY785835.1| Hordeum vulgare subsp. vulgare cultivar Kompolti korai MADS-box
protein HvBM5A (BM5A) mRNA, complete cds
Length = 1113
Score = 119 bits (255), Expect(2) = 6e-051
Identities = 49/59 (83%), Positives = 57/59 (96%)
Frame = +2 / +2
Query: 212 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS 388
MGRG+V+LKRIENKINRQVTFSKRR+GLLKKA+E+SVLCDAEV LIIFS++GKLYEF +
Sbjct: 98 MGRGKVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIIFSTKGKLYEFST 274
Score = 102 bits (217), Expect(2) = 6e-051
Identities = 43/83 (51%), Positives = 60/83 (72%)
Frame = +2 / +2
Query: 473 SWYQEMSKLRAKFEALQRTQRHLLGEELGPLSVKELQQLEKQLECALSQARQRKTQLMME 652
+W E KL+AK E +Q+ Q+HL+GE+L L++KELQQLE+QLE +L R RK QLM E
Sbjct: 365 NWCHEYRKLKAKVETIQKCQKHLMGEDLESLNLKELQQLEQQLESSLKHIRARKNQLMHE 544
Query: 653 QVEELRRKERHLGEMNRQLKHKL 721
+ EL++KER L E N+ L+ +L
Sbjct: 545 SISELQKKERSLQEENKVLQKEL 613
>gb|AY866486.1| Hordeum vulgare subsp. vulgare cultivar Triumph MADS-box protein
HvBM5A (BM5A) mRNA, complete cds
Length = 1105
Score = 119 bits (255), Expect(2) = 6e-051
Identities = 49/59 (83%), Positives = 57/59 (96%)
Frame = +2 / +3
Query: 212 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS 388
MGRG+V+LKRIENKINRQVTFSKRR+GLLKKA+E+SVLCDAEV LIIFS++GKLYEF +
Sbjct: 90 MGRGKVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIIFSTKGKLYEFST 266
Score = 102 bits (217), Expect(2) = 6e-051
Identities = 43/83 (51%), Positives = 60/83 (72%)
Frame = +2 / +3
Query: 473 SWYQEMSKLRAKFEALQRTQRHLLGEELGPLSVKELQQLEKQLECALSQARQRKTQLMME 652
+W E KL+AK E +Q+ Q+HL+GE+L L++KELQQLE+QLE +L R RK QLM E
Sbjct: 357 NWCHEYRKLKAKVETIQKCQKHLMGEDLESLNLKELQQLEQQLESSLKHIRARKNQLMHE 536
Query: 653 QVEELRRKERHLGEMNRQLKHKL 721
+ EL++KER L E N+ L+ +L
Sbjct: 537 SISELQKKERSLQEENKVLQKEL 605
>gb|BJ547898.1|BJ547898 BJ547898 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal41e01 5', mRNA sequence
Length = 670
Score = 119 bits (255), Expect(2) = 6e-051
Identities = 49/59 (83%), Positives = 57/59 (96%)
Frame = +2 / +2
Query: 212 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS 388
MGRG+V+LKRIENKINRQVTFSKRR+GLLKKA+E+SVLCDAEV LIIFS++GKLYEF +
Sbjct: 110 MGRGKVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIIFSTKGKLYEFST 286
Score = 102 bits (217), Expect(2) = 6e-051
Identities = 43/83 (51%), Positives = 60/83 (72%)
Frame = +2 / +2
Query: 473 SWYQEMSKLRAKFEALQRTQRHLLGEELGPLSVKELQQLEKQLECALSQARQRKTQLMME 652
+W E KL+AK E +Q+ Q+HL+GE+L L++KELQQLE+QLE +L R RK QLM E
Sbjct: 377 NWCHEYRKLKAKVETIQKCQKHLMGEDLESLNLKELQQLEQQLESSLKHIRARKNQLMHE 556
Query: 653 QVEELRRKERHLGEMNRQLKHKL 721
+ EL++KER L E N+ L+ +L
Sbjct: 557 SISELQKKERSLQEENKVLQKEL 625
>gb|BI958544.1|BI958544 HVSMEn0015I07f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0015I07f, mRNA sequence
Length = 631
Score = 119 bits (255), Expect(2) = 6e-051
Identities = 49/59 (83%), Positives = 57/59 (96%)
Frame = +2 / +3
Query: 212 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS 388
MGRG+V+LKRIENKINRQVTFSKRR+GLLKKA+E+SVLCDAEV LIIFS++GKLYEF +
Sbjct: 111 MGRGKVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIIFSTKGKLYEFST 287
Score = 102 bits (217), Expect(2) = 6e-051
Identities = 43/83 (51%), Positives = 60/83 (72%)
Frame = +2 / +3
Query: 473 SWYQEMSKLRAKFEALQRTQRHLLGEELGPLSVKELQQLEKQLECALSQARQRKTQLMME 652
+W E KL+AK E +Q+ Q+HL+GE+L L++KELQQLE+QLE +L R RK QLM E
Sbjct: 378 NWCHEYRKLKAKVETIQKCQKHLMGEDLESLNLKELQQLEQQLESSLKHIRARKNQLMHE 557
Query: 653 QVEELRRKERHLGEMNRQLKHKL 721
+ EL++KER L E N+ L+ +L
Sbjct: 558 SISELQKKERSLQEENKVLQKEL 626
>gb|BU997618.1|BU997618 HI08I05r HI Hordeum vulgare subsp. vulgare cDNA clone HI08I05
5-PRIME, mRNA sequence
Length = 610
Score = 119 bits (255), Expect(2) = 6e-051
Identities = 49/59 (83%), Positives = 57/59 (96%)
Frame = +2 / +1
Query: 212 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS 388
MGRG+V+LKRIENKINRQVTFSKRR+GLLKKA+E+SVLCDAEV LIIFS++GKLYEF +
Sbjct: 91 MGRGKVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIIFSTKGKLYEFST 267
Score = 102 bits (217), Expect(2) = 6e-051
Identities = 43/83 (51%), Positives = 60/83 (72%)
Frame = +2 / +1
Query: 473 SWYQEMSKLRAKFEALQRTQRHLLGEELGPLSVKELQQLEKQLECALSQARQRKTQLMME 652
+W E KL+AK E +Q+ Q+HL+GE+L L++KELQQLE+QLE +L R RK QLM E
Sbjct: 358 NWCHEYRKLKAKVETIQKCQKHLMGEDLESLNLKELQQLEQQLESSLKHIRARKNQLMHE 537
Query: 653 QVEELRRKERHLGEMNRQLKHKL 721
+ EL++KER L E N+ L+ +L
Sbjct: 538 SISELQKKERSLQEENKVLQKEL 606
>gb|BI957545.1|BI957545 HVSMEn0010B09f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0010B09f, mRNA sequence
Length = 622
Score = 119 bits (255), Expect(2) = 8e-051
Identities = 47/61 (77%), Positives = 58/61 (95%)
Frame = +2 / +3
Query: 206 VAMGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFG 385
+ MGRG+V+LKRIENKINRQVTFSKRRNGLL+KA+E+SVLCDAEVA+I+FS +GKLYE+
Sbjct: 72 IGMGRGKVQLKRIENKINRQVTFSKRRNGLLRKAHEISVLCDAEVAVIVFSPKGKLYEYA 251
Query: 386 S 388
+
Sbjct: 252 T 254
Score = 101 bits (216), Expect(2) = 8e-051
Identities = 42/83 (50%), Positives = 59/83 (71%)
Frame = +2 / +3
Query: 473 SWYQEMSKLRAKFEALQRTQRHLLGEELGPLSVKELQQLEKQLECALSQARQRKTQLMME 652
+W E KL+AK E +Q+ +HL+GE+L L++KELQQLE+QLE +L R RK+ LMME
Sbjct: 345 NWCHEYRKLKAKIETIQKCHKHLMGEDLDSLNLKELQQLEQQLESSLKHIRSRKSHLMME 524
Query: 653 QVEELRRKERHLGEMNRQLKHKL 721
+ EL++KER L E N+ L +L
Sbjct: 525 SISELQKKERSLQEENQALPKEL 593
>gb|BU975559.1|BU975559 HB31I14r BC Hordeum vulgare subsp. vulgare cDNA clone HB31I14
5-PRIME, mRNA sequence
Length = 532
Score = 124 bits (265), Expect(3) = 2e-050
Identities = 53/57 (92%), Positives = 56/57 (98%)
Frame = +2 / +2
Query: 218 RGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS 388
RGRVELKRIENKINRQVTF+KRRNGLLKKAYELSVLCDAEVALI+FS+RGKLYEF S
Sbjct: 8 RGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIVFSNRGKLYEFCS 178
Score = 89.0 bits (188), Expect(3) = 2e-050
Identities = 39/80 (48%), Positives = 56/80 (70%)
Frame = +2 / +2
Query: 485 EMSKLRAKFEALQRTQRHLLGEELGPLSVKELQQLEKQLECALSQARQRKTQLMMEQVEE 664
E KL+ + + LQRTQR+LLGE+L L +KEL+ LEKQL+ +L R +TQ M++Q+ E
Sbjct: 287 EYLKLKTRVDNLQRTQRNLLGEDLDSLGIKELESLEKQLDSSLKHIRTTRTQHMVDQLTE 466
Query: 665 LRRKERHLGEMNRQLKHKLE 724
L+R+E E N+ L+ KLE
Sbjct: 467 LQRREXMFSEANKCLRIKLE 526
Score = 25.8 bits (50), Expect(3) = 2e-050
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +2 / +2
Query: 395 ITKTLERYQHCCY 433
+TKTL++YQ C Y
Sbjct: 188 MTKTLDKYQKCSY 226
>gb|BJ547783.1|BJ547783 BJ547783 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal39e04 5', mRNA sequence
Length = 613
Score = 119 bits (255), Expect(2) = 3e-050
Identities = 49/59 (83%), Positives = 57/59 (96%)
Frame = +2 / +2
Query: 212 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS 388
MGRG+V+LKRIENKINRQVTFSKRR+GLLKKA+E+SVLCDAEV LIIFS++GKLYEF +
Sbjct: 110 MGRGKVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIIFSTKGKLYEFST 286
Score = 100 bits (212), Expect(2) = 3e-050
Identities = 42/79 (53%), Positives = 57/79 (72%)
Frame = +2 / +2
Query: 473 SWYQEMSKLRAKFEALQRTQRHLLGEELGPLSVKELQQLEKQLECALSQARQRKTQLMME 652
+W E KL+AK E +Q+ Q+HL+GE+L L++KELQQLE+QLE +L R RK QLM E
Sbjct: 377 NWCHEYRKLKAKVETIQKCQKHLMGEDLESLNLKELQQLEQQLESSLKHIRARKNQLMHE 556
Query: 653 QVEELRRKERHLGEMNRQL 709
+ EL++KER L E N+ L
Sbjct: 557 SISELQKKERSLQEENKVL 613
>gb|BJ547620.1|BJ547620 BJ547620 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal33f04 5', mRNA sequence
Length = 603
Score = 119 bits (255), Expect(2) = 3e-050
Identities = 49/59 (83%), Positives = 57/59 (96%)
Frame = +2 / +2
Query: 212 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS 388
MGRG+V+LKRIENKINRQVTFSKRR+GLLKKA+E+SVLCDAEV LIIFS++GKLYEF +
Sbjct: 98 MGRGKVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIIFSTKGKLYEFST 274
Score = 100 bits (212), Expect(2) = 3e-050
Identities = 42/79 (53%), Positives = 57/79 (72%)
Frame = +2 / +2
Query: 473 SWYQEMSKLRAKFEALQRTQRHLLGEELGPLSVKELQQLEKQLECALSQARQRKTQLMME 652
+W E KL+AK E +Q+ Q+HL+GE+L L++KELQQLE+QLE +L R RK QLM E
Sbjct: 365 NWCHEYRKLKAKVETIQKCQKHLMGEDLESLNLKELQQLEQQLESSLKHIRARKNQLMHE 544
Query: 653 QVEELRRKERHLGEMNRQL 709
+ EL++KER L E N+ L
Sbjct: 545 SISELQKKERSLQEENKVL 601
>gb|CA022365.1|CA022365 HZ42O13r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ42O13
5-PRIME, mRNA sequence
Length = 655
Score = 122 bits (260), Expect(3) = 4e-050
Identities = 52/56 (92%), Positives = 55/56 (98%)
Frame = +2 / +1
Query: 221 GRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS 388
GRVELKRIENKINRQVTF+KRRNGLLKKAYELSVLCDAEVALI+FS+RGKLYEF S
Sbjct: 13 GRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIVFSNRGKLYEFCS 180
Score = 90.0 bits (190), Expect(3) = 4e-050
Identities = 39/80 (48%), Positives = 57/80 (71%)
Frame = +2 / +1
Query: 485 EMSKLRAKFEALQRTQRHLLGEELGPLSVKELQQLEKQLECALSQARQRKTQLMMEQVEE 664
E KL+ + + LQRTQR+LLGE+L L +KEL+ LEKQL+ +L R +TQ M++Q+ E
Sbjct: 289 EYLKLKTRVDNLQRTQRNLLGEDLDSLGIKELESLEKQLDSSLKHIRTTRTQHMVDQLTE 468
Query: 665 LRRKERHLGEMNRQLKHKLE 724
L+R+E+ E N+ L+ KLE
Sbjct: 469 LQRREQMFSEANKCLRIKLE 528
Score = 25.8 bits (50), Expect(3) = 4e-050
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +2 / +1
Query: 395 ITKTLERYQHCCY 433
+TKTL++YQ C Y
Sbjct: 190 MTKTLDKYQKCSY 228
>gb|BJ547335.1|BJ547335 BJ547335 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal30m04 5', mRNA sequence
Length = 630
Score = 119 bits (255), Expect(2) = 6e-050
Identities = 49/59 (83%), Positives = 57/59 (96%)
Frame = +2 / +1
Query: 212 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS 388
MGRG+V+LKRIENKINRQVTFSKRR+GLLKKA+E+SVLCDAEV LIIFS++GKLYEF +
Sbjct: 133 MGRGKVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIIFSTKGKLYEFST 309
Score = 99.1 bits (210), Expect(2) = 6e-050
Identities = 41/77 (53%), Positives = 56/77 (72%)
Frame = +2 / +1
Query: 473 SWYQEMSKLRAKFEALQRTQRHLLGEELGPLSVKELQQLEKQLECALSQARQRKTQLMME 652
+W E KL+AK E +Q+ Q+HL+GE+L L++KELQQLE+QLE +L R RK QLM E
Sbjct: 400 NWCHEYRKLKAKVETIQKCQKHLMGEDLESLNLKELQQLEQQLESSLKHIRARKNQLMHE 579
Query: 653 QVEELRRKERHLGEMNR 703
+ EL++KER L E N+
Sbjct: 580 SISELQKKERSLQEENK 630
>gb|BU999147.1|BU999147 HI13G17r HI Hordeum vulgare subsp. vulgare cDNA clone HI13G17
5-PRIME, mRNA sequence
Length = 605
Score = 119 bits (255), Expect(2) = 6e-050
Identities = 49/59 (83%), Positives = 57/59 (96%)
Frame = +2 / +1
Query: 212 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS 388
MGRG+V+LKRIENKINRQVTFSKRR+GLLKKA+E+SVLCDAEV LIIFS++GKLYEF +
Sbjct: 103 MGRGKVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIIFSTKGKLYEFST 279
Score = 99.1 bits (210), Expect(2) = 6e-050
Identities = 41/77 (53%), Positives = 56/77 (72%)
Frame = +2 / +1
Query: 473 SWYQEMSKLRAKFEALQRTQRHLLGEELGPLSVKELQQLEKQLECALSQARQRKTQLMME 652
+W E KL+AK E +Q+ Q+HL+GE+L L++KELQQLE+QLE +L R RK QLM E
Sbjct: 370 NWCHEYRKLKAKVETIQKCQKHLMGEDLESLNLKELQQLEQQLESSLKHIRARKNQLMHE 549
Query: 653 QVEELRRKERHLGEMNR 703
+ EL++KER L E N+
Sbjct: 550 SISELQKKERSLQEENK 600
>gb|BU994410.1|BU994410 HM06P17r HM Hordeum vulgare subsp. vulgare cDNA clone HM06P17
5-PRIME, mRNA sequence
Length = 592
Score = 119 bits (255), Expect(2) = 6e-050
Identities = 49/59 (83%), Positives = 57/59 (96%)
Frame = +2 / +1
Query: 212 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS 388
MGRG+V+LKRIENKINRQVTFSKRR+GLLKKA+E+SVLCDAEV LIIFS++GKLYEF +
Sbjct: 91 MGRGKVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIIFSTKGKLYEFST 267
Score = 99.1 bits (210), Expect(2) = 6e-050
Identities = 41/77 (53%), Positives = 56/77 (72%)
Frame = +2 / +1
Query: 473 SWYQEMSKLRAKFEALQRTQRHLLGEELGPLSVKELQQLEKQLECALSQARQRKTQLMME 652
+W E KL+AK E +Q+ Q+HL+GE+L L++KELQQLE+QLE +L R RK QLM E
Sbjct: 358 NWCHEYRKLKAKVETIQKCQKHLMGEDLESLNLKELQQLEQQLESSLKHIRARKNQLMHE 537
Query: 653 QVEELRRKERHLGEMNR 703
+ EL++KER L E N+
Sbjct: 538 SISELQKKERSLQEENK 588
>gb|CA023749.1|CA023749 HZ47E18r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ47E18
5-PRIME, mRNA sequence
Length = 610
Score = 113 bits (241), Expect(3) = 7e-050
Identities = 46/57 (80%), Positives = 55/57 (96%)
Frame = +2 / +1
Query: 221 GRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 391
G+VE++RIENKI+RQVTF+KRRNGLLKKAYELS+LCDAEVALIIFS RG+L+EF S+
Sbjct: 10 GKVEMRRIENKISRQVTFAKRRNGLLKKAYELSLLCDAEVALIIFSGRGRLFEFSSS 180
Score = 97.7 bits (207), Expect(3) = 7e-050
Identities = 38/82 (46%), Positives = 61/82 (74%)
Frame = +2 / +1
Query: 479 YQEMSKLRAKFEALQRTQRHLLGEELGPLSVKELQQLEKQLECALSQARQRKTQLMMEQV 658
YQE KL+ + E LQ +QR++LGE+LGPLS+KEL Q+E Q++ +L R +K Q++++Q+
Sbjct: 313 YQEYLKLKTRVEFLQSSQRNILGEDLGPLSMKELDQIENQIDASLQHIRSKKNQVLLDQL 492
Query: 659 EELRRKERHLGEMNRQLKHKLE 724
EL+ KE+ L + N+ L+ KL+
Sbjct: 493 FELKSKEQELQDENKDLRKKLQ 558
Score = 25.8 bits (50), Expect(3) = 7e-050
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +2 / +1
Query: 386 SAGITKTLERYQHCCYNAQDS 448
S+ + KTLERY+ C N+Q++
Sbjct: 178 SSCMYKTLERYRTCNSNSQEA 240
>gb|BJ547578.1|BJ547578 BJ547578 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal32h20 5', mRNA sequence
Length = 605
Score = 119 bits (255), Expect(2) = 1e-049
Identities = 49/59 (83%), Positives = 57/59 (96%)
Frame = +2 / +2
Query: 212 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS 388
MGRG+V+LKRIENKINRQVTFSKRR+GLLKKA+E+SVLCDAEV LIIFS++GKLYEF +
Sbjct: 110 MGRGKVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIIFSTKGKLYEFST 286
Score = 98.2 bits (208), Expect(2) = 1e-049
Identities = 41/76 (53%), Positives = 55/76 (72%)
Frame = +2 / +2
Query: 473 SWYQEMSKLRAKFEALQRTQRHLLGEELGPLSVKELQQLEKQLECALSQARQRKTQLMME 652
+W E KL+AK E +Q+ Q+HL+GE+L L++KELQQLE+QLE +L R RK QLM E
Sbjct: 377 NWCHEYRKLKAKVETIQKCQKHLMGEDLESLNLKELQQLEQQLESSLKHIRARKNQLMHE 556
Query: 653 QVEELRRKERHLGEMN 700
+ EL++KER L E N
Sbjct: 557 SISELQKKERSLQEEN 604
>gb|BJ547327.1|BJ547327 BJ547327 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal30j16 5', mRNA sequence
Length = 603
Score = 119 bits (255), Expect(2) = 4e-049
Identities = 49/59 (83%), Positives = 57/59 (96%)
Frame = +2 / +3
Query: 212 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS 388
MGRG+V+LKRIENKINRQVTFSKRR+GLLKKA+E+SVLCDAEV LIIFS++GKLYEF +
Sbjct: 111 MGRGKVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIIFSTKGKLYEFST 287
Score = 96.4 bits (204), Expect(2) = 4e-049
Identities = 40/74 (54%), Positives = 54/74 (72%)
Frame = +2 / +3
Query: 473 SWYQEMSKLRAKFEALQRTQRHLLGEELGPLSVKELQQLEKQLECALSQARQRKTQLMME 652
+W E KL+AK E +Q+ Q+HL+GE+L L++KELQQLE+QLE +L R RK QLM E
Sbjct: 378 NWCHEYRKLKAKVETIQKCQKHLMGEDLESLNLKELQQLEQQLESSLKHIRARKNQLMHE 557
Query: 653 QVEELRRKERHLGE 694
+ EL++KER L E
Sbjct: 558 SISELQKKERSLQE 599
>gb|BU999601.1|BU999601 HI15A03r HI Hordeum vulgare subsp. vulgare cDNA clone HI15A03
5-PRIME, mRNA sequence
Length = 579
Score = 119 bits (255), Expect(2) = 4e-049
Identities = 49/59 (83%), Positives = 57/59 (96%)
Frame = +2 / +3
Query: 212 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS 388
MGRG+V+LKRIENKINRQVTFSKRR+GLLKKA+E+SVLCDAEV LIIFS++GKLYEF +
Sbjct: 90 MGRGKVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIIFSTKGKLYEFST 266
Score = 96.4 bits (204), Expect(2) = 4e-049
Identities = 40/74 (54%), Positives = 54/74 (72%)
Frame = +2 / +3
Query: 473 SWYQEMSKLRAKFEALQRTQRHLLGEELGPLSVKELQQLEKQLECALSQARQRKTQLMME 652
+W E KL+AK E +Q+ Q+HL+GE+L L++KELQQLE+QLE +L R RK QLM E
Sbjct: 357 NWCHEYRKLKAKVETIQKCQKHLMGEDLESLNLKELQQLEQQLESSLKHIRARKNQLMHE 536
Query: 653 QVEELRRKERHLGE 694
+ EL++KER L E
Sbjct: 537 SISELQKKERSLQE 578
>gb|CA032046.1|CA032046 HX11N16r HX Hordeum vulgare subsp. vulgare cDNA clone HX11N16
5-PRIME, mRNA sequence
Length = 580
Score = 119 bits (255), Expect(2) = 4e-049
Identities = 49/59 (83%), Positives = 57/59 (96%)
Frame = +2 / +1
Query: 212 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS 388
MGRG+V+LKRIENKINRQVTFSKRR+GLLKKA+E+SVLCDAEV LIIFS++GKLYEF +
Sbjct: 91 MGRGKVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIIFSTKGKLYEFST 267
Score = 96.4 bits (204), Expect(2) = 4e-049
Identities = 40/74 (54%), Positives = 54/74 (72%)
Frame = +2 / +1
Query: 473 SWYQEMSKLRAKFEALQRTQRHLLGEELGPLSVKELQQLEKQLECALSQARQRKTQLMME 652
+W E KL+AK E +Q+ Q+HL+GE+L L++KELQQLE+QLE +L R RK QLM E
Sbjct: 358 NWCHEYRKLKAKVETIQKCQKHLMGEDLESLNLKELQQLEQQLESSLKHIRARKNQLMHE 537
Query: 653 QVEELRRKERHLGE 694
+ EL++KER L E
Sbjct: 538 SISELQKKERSLQE 579
>gb|BU994511.1|BU994511 HM07E21r HM Hordeum vulgare subsp. vulgare cDNA clone HM07E21
5-PRIME, mRNA sequence
Length = 652
Score = 118 bits (252), Expect(3) = 5e-049
Identities = 51/57 (89%), Positives = 54/57 (94%)
Frame = +2 / +1
Query: 218 RGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS 388
R VELKRIENKINRQVTF+KRRNGLLKKAYELSVLCDAEVALI+FS+RGKLYEF S
Sbjct: 1 RHEVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIVFSNRGKLYEFCS 171
Score = 90.0 bits (190), Expect(3) = 5e-049
Identities = 39/80 (48%), Positives = 57/80 (71%)
Frame = +2 / +1
Query: 485 EMSKLRAKFEALQRTQRHLLGEELGPLSVKELQQLEKQLECALSQARQRKTQLMMEQVEE 664
E KL+ + + LQRTQR+LLGE+L L +KEL+ LEKQL+ +L R +TQ M++Q+ E
Sbjct: 280 EYLKLKTRVDNLQRTQRNLLGEDLDSLGIKELESLEKQLDSSLKHIRTTRTQHMVDQLTE 459
Query: 665 LRRKERHLGEMNRQLKHKLE 724
L+R+E+ E N+ L+ KLE
Sbjct: 460 LQRREQMFSEANKCLRIKLE 519
Score = 25.8 bits (50), Expect(3) = 5e-049
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +2 / +1
Query: 395 ITKTLERYQHCCY 433
+TKTL++YQ C Y
Sbjct: 181 MTKTLDKYQKCSY 219
>emb|AJ249143.1|HVU249143 Hordeum vulgare mRNA for MADS-box protein 3 (m3 gene)
Length = 1540
Score = 117 bits (251), Expect(2) = 9e-049
Identities = 48/59 (81%), Positives = 57/59 (96%)
Frame = +2 / +2
Query: 212 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS 388
MGRG V+L+RIENKINRQVTFSKRR+GLLKKA+E+SVLCDAEVALI+FS++GKLYE+ S
Sbjct: 314 MGRGPVQLRRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLYEYSS 490
Score = 96.8 bits (205), Expect(2) = 9e-049
Identities = 40/83 (48%), Positives = 57/83 (68%)
Frame = +2 / +2
Query: 473 SWYQEMSKLRAKFEALQRTQRHLLGEELGPLSVKELQQLEKQLECALSQARQRKTQLMME 652
+W E L+ K +ALQ++QR LLGE+L PL+ KELQQLE+QL+ +L R RK QL+ E
Sbjct: 584 NWGDEYGSLKIKLDALQKSQRQLLGEQLDPLTTKELQQLEQQLDSSLKHIRSRKNQLLFE 763
Query: 653 QVEELRRKERHLGEMNRQLKHKL 721
+ EL++KE+ L + N L+ L
Sbjct: 764 SISELQKKEKSLKDQNGVLQKHL 832
>gb|BM097091.2|BM097091 EBpi07_SQ002_F23_R pistil, 12 DPA, no treatment, cv Optic, EBpi07
Hordeum vulgare subsp. vulgare cDNA clone
EBpi07_SQ002_F23 5', mRNA sequence
Length = 579
Score = 116 bits (249), Expect(3) = 1e-048
Identities = 50/54 (92%), Positives = 53/54 (98%)
Frame = +2 / +1
Query: 227 VELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS 388
VELKRIENKINRQVTF+KRRNGLLKKAYELSVLCDAEVALI+FS+RGKLYEF S
Sbjct: 1 VELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIVFSNRGKLYEFCS 162
Score = 90.0 bits (190), Expect(3) = 1e-048
Identities = 39/80 (48%), Positives = 57/80 (71%)
Frame = +2 / +1
Query: 485 EMSKLRAKFEALQRTQRHLLGEELGPLSVKELQQLEKQLECALSQARQRKTQLMMEQVEE 664
E KL+ + + LQRTQR+LLGE+L L +KEL+ LEKQL+ +L R +TQ M++Q+ E
Sbjct: 271 EYLKLKTRVDNLQRTQRNLLGEDLDSLGIKELESLEKQLDSSLKHIRTTRTQHMVDQLTE 450
Query: 665 LRRKERHLGEMNRQLKHKLE 724
L+R+E+ E N+ L+ KLE
Sbjct: 451 LQRREQMFSEANKCLRIKLE 510
Score = 25.8 bits (50), Expect(3) = 1e-048
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +2 / +1
Query: 395 ITKTLERYQHCCY 433
+TKTL++YQ C Y
Sbjct: 172 MTKTLDKYQKCSY 210
>gb|BE195618.2|BE195618 HVSMEh0089O24f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0089O24f, mRNA sequence
Length = 917
Score = 102 bits (218), Expect(3) = 2e-048
Identities = 45/85 (52%), Positives = 63/85 (74%)
Frame = +2 / +1
Query: 470 QSWYQEMSKLRAKFEALQRTQRHLLGEELGPLSVKELQQLEKQLECALSQARQRKTQLMM 649
QS E KL+A+ E LQRTQR+LLGE+LG L +K+L+QLEKQL+ +L R +TQ M+
Sbjct: 238 QSSRNEYLKLKARVENLQRTQRNLLGEDLGSLGIKDLEQLEKQLDSSLRHIRSTRTQHML 417
Query: 650 EQVEELRRKERHLGEMNRQLKHKLE 724
+Q+ +L+RKE+ L E N+ L+ KLE
Sbjct: 418 DQLTDLQRKEQMLSEANKCLRRKLE 492
Score = 100 bits (214), Expect(3) = 2e-048
Identities = 44/48 (91%), Positives = 46/48 (95%)
Frame = +2 / +1
Query: 245 ENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS 388
EN INRQVTF+KRRNGLLKKAYELSVLCDAEVALIIFS+RGKLYEF S
Sbjct: 1 EN*INRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS 144
Score = 28.6 bits (56), Expect(3) = 2e-048
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +2 / +1
Query: 401 KTLERYQHCCYNAQDS 448
KTLERYQ C Y D+
Sbjct: 160 KTLERYQKCSYGGPDT 207
>emb|AJ249144.1|HVU249144 Hordeum vulgare mRNA for MADS-box protein 5 (m5 gene)
Length = 1196
Score = 111 bits (236), Expect(2) = 2e-048
Identities = 47/59 (79%), Positives = 55/59 (93%)
Frame = +2 / +3
Query: 212 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS 388
MGR +V+LKRIENKINRQVTFSKRR+GLLKKA+E+SVL DAEV LIIFS++GKLYEF +
Sbjct: 141 MGRRKVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLYDAEVGLIIFSTKGKLYEFST 317
Score = 102 bits (217), Expect(2) = 2e-048
Identities = 43/83 (51%), Positives = 60/83 (72%)
Frame = +2 / +3
Query: 473 SWYQEMSKLRAKFEALQRTQRHLLGEELGPLSVKELQQLEKQLECALSQARQRKTQLMME 652
+W E KL+AK E +Q+ Q+HL+GE+L L++KELQQLE+QLE +L R RK QLM E
Sbjct: 408 NWCHEYRKLKAKVETIQKCQKHLMGEDLESLNLKELQQLEQQLESSLKHIRARKNQLMHE 587
Query: 653 QVEELRRKERHLGEMNRQLKHKL 721
+ EL++KER L E N+ L+ +L
Sbjct: 588 SISELQKKERSLQEENKVLQKEL 656
>gb|BE193714.2|BE193714 HVSMEh0082E10f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0082E10f, mRNA sequence
Length = 744
Score = 102 bits (218), Expect(3) = 1e-047
Identities = 45/85 (52%), Positives = 63/85 (74%)
Frame = +2 / +1
Query: 470 QSWYQEMSKLRAKFEALQRTQRHLLGEELGPLSVKELQQLEKQLECALSQARQRKTQLMM 649
QS E KL+A+ E LQRTQR+LLGE+LG L +K+L+QLEKQL+ +L R +TQ M+
Sbjct: 229 QSSRNEYLKLKARVENLQRTQRNLLGEDLGSLGIKDLEQLEKQLDSSLRHIRSTRTQHML 408
Query: 650 EQVEELRRKERHLGEMNRQLKHKLE 724
+Q+ +L+RKE+ L E N+ L+ KLE
Sbjct: 409 DQLTDLQRKEQMLSEANKCLRRKLE 483
Score = 97.7 bits (207), Expect(3) = 1e-047
Identities = 42/45 (93%), Positives = 44/45 (97%)
Frame = +2 / +1
Query: 254 INRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS 388
INRQVTF+KRRNGLLKKAYELSVLCDAEVALIIFS+RGKLYEF S
Sbjct: 1 INRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS 135
Score = 28.6 bits (56), Expect(3) = 1e-047
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +2 / +1
Query: 401 KTLERYQHCCYNAQDS 448
KTLERYQ C Y D+
Sbjct: 151 KTLERYQKCSYGGPDT 198
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 686,483,811
Number of Sequences: 312970
Number of extensions: 12462762
Number of successful extensions: 88330
Number of sequences better than 1.0e-020: 242
length of database: 58,378,179
effective HSP length: 53
effective length of database: 41,790,769
effective search space used: 16298399910
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)