TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2647391.2.1
(1118 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AL503324.1|AL503324 AL503324 Hordeum vulgare Barke roots... 193 3e-069
gb|BF621550.2|BF621550 HVSMEa0011F24f Hordeum vulgare seedl... 193 3e-068
gb|BF622215.3|BF622215 HVSMEa0002A20f Hordeum vulgare seedl... 193 7e-068
gb|BF622224.2|BF622224 HVSMEa0002C05f Hordeum vulgare seedl... 193 6e-067
gb|BE214393.3|BE214393 HV_CEb0003F04f Hordeum vulgare seedl... 195 5e-065
gb|BF631562.2|BF631562 HVSMEb0016G15f Hordeum vulgare seedl... 174 2e-064
gb|BJ547778.1|BJ547778 BJ547778 K. Sato unpublished cDNA li... 177 9e-064
gb|BJ547635.1|BJ547635 BJ547635 K. Sato unpublished cDNA li... 177 2e-062
gb|BM817225.1|BM817225 HC109B04_T3.ab1 HC Hordeum vulgare s... 189 3e-062
gb|BF622265.2|BF622265 HVSMEa0002G13f Hordeum vulgare seedl... 186 8e-062
gb|AV933203.1|AV933203 AV933203 K. Sato unpublished cDNA li... 174 1e-061
gb|BF622591.2|BF622591 HVSMEa0007C21f Hordeum vulgare seedl... 187 2e-061
gb|AV913623.1|AV913623 AV913623 K. Sato unpublished cDNA li... 172 5e-061
gb|BE421272.1|BE421272 HWM007.F01 ITEC HWM Barley Leaf Libr... 177 7e-061
gb|BQ762933.1|BQ762933 EBro02_SQ006_H16 _R root, 3 week, hy... 163 2e-059
gb|BJ544573.1|BJ544573 BJ544573 K. Sato unpublished cDNA li... 168 6e-059
gb|BF625550.2|BF625550 HVSMEa0011E08f Hordeum vulgare seedl... 187 8e-059
gb|CA013731.1|CA013731 HT09F05r HT Hordeum vulgare subsp. v... 175 1e-058
gb|BF263502.3|BF263502 HV_CEa0006O15f Hordeum vulgare seedl... 214 4e-058
gb|BJ544235.1|BJ544235 BJ544235 K. Sato unpublished cDNA li... 172 7e-058
gb|BF264380.2|BF264380 HV_CEa0009E08f Hordeum vulgare seedl... 91 1e-057
gb|BM816911.1|BM816911 HB106C10_SK.ab1 HB Hordeum vulgare s... 158 3e-057
gb|BE421080.1|BE421080 HWM005.F01 ITEC HWM Barley Leaf Libr... 177 5e-057
gb|BJ548902.1|BJ548902 BJ548902 K. Sato unpublished cDNA li... 147 7e-057
gb|BF624618.2|BF624618 HVSMEa0017E14f Hordeum vulgare seedl... 193 9e-057
gb|BF621862.3|BF621862 HVSMEa0001C05f Hordeum vulgare seedl... 193 4e-056
gb|BF629286.3|BF629286 HVSMEb0010K15f Hordeum vulgare seedl... 193 1e-055
gb|AL504140.1|AL504140 AL504140 Hordeum vulgare Barke roots... 113 6e-055
gb|BF267688.2|BF267688 HV_CEa0018J20f Hordeum vulgare seedl... 160 1e-054
gb|BQ471126.1|BQ471126 HV01D06T HV Hordeum vulgare subsp. v... 172 5e-054
gb|BJ548150.1|BJ548150 BJ548150 K. Sato unpublished cDNA li... 137 9e-054
gb|BF625970.2|BF625970 HVSMEa0015B01f Hordeum vulgare seedl... 187 2e-053
gb|CA011829.1|CA011829 HT03K17r HT Hordeum vulgare subsp. v... 161 3e-053
gb|BG299731.1|BG299731 HVSMEa0021J09f Hordeum vulgare seedl... 193 6e-053
gb|AV908971.1|AV908971 AV908971 K. Sato unpublished cDNA li... 172 8e-052
gb|BF621473.2|BF621473 HVSMEa0011B16f Hordeum vulgare seedl... 173 7e-051
gb|BE214950.1|BE214950 HV_CEb0005F03f Hordeum vulgare seedl... 171 9e-051
gb|BQ466487.1|BQ466487 HT02K21r HT Hordeum vulgare subsp. v... 193 9e-050
gb|CA022668.1|CA022668 HZ44A05r HZ Hordeum vulgare subsp. v... 127 2e-049
gb|BF622512.2|BF622512 HVSMEa0004K18f Hordeum vulgare seedl... 193 1e-048
gb|BF624202.2|BF624202 HVSMEa0012J22f Hordeum vulgare seedl... 193 1e-048
gb|BF626678.2|BF626678 HVSMEb0001A21f Hordeum vulgare seedl... 177 3e-048
gb|CA012539.1|CA012539 HT05L11r HT Hordeum vulgare subsp. v... 161 3e-048
gb|BU989585.1|BU989585 HF22C07r HF Hordeum vulgare subsp. v... 179 5e-048
gb|BF622191.2|BF622191 HVSMEa0001P16f Hordeum vulgare seedl... 191 5e-048
gb|BE214207.2|BE214207 HV_CEb0002K18f Hordeum vulgare seedl... 126 7e-048
gb|BQ465287.1|BQ465287 HU03D01r HU Hordeum vulgare subsp. v... 161 3e-047
gb|BQ467879.1|BQ467879 HR01D11r HR Hordeum vulgare subsp. v... 189 3e-047
gb|BG299389.1|BG299389 HVSMEa0019L19f Hordeum vulgare seedl... 128 4e-047
gb|BF625840.2|BF625840 HVSMEa0013N01f Hordeum vulgare seedl... 187 9e-047
gb|BG368482.1|BG368482 HVSMEi0019D10f Hordeum vulgare 20 DA... 175 1e-046
gb|AL505815.1|AL505815 AL505815 Hordeum vulgare Barke roots... 187 1e-046
gb|BF066033.2|BF066033 HV_CEb0014K12f Hordeum vulgare seedl... 116 2e-046
gb|BF257478.2|BF257478 HVSMEf0013A10f Hordeum vulgare seedl... 186 2e-046
gb|BE195630.3|BE195630 HVSMEh0089P24f Hordeum vulgare 5-45 ... 185 3e-046
gb|BF065184.1|BF065184 HV_CEb0023O18f Hordeum vulgare seedl... 173 6e-046
gb|BG368894.1|BG368894 HVSMEi0021D06f Hordeum vulgare 20 DA... 128 1e-045
gb|BM369733.2|BM369733 EBem07_SQ004_H07_R embryo, 28 DPA, n... 183 2e-045
gb|CA006848.1|CA006848 HU05N24r HU Hordeum vulgare subsp. v... 137 3e-045
gb|BI950533.1|BI950533 HVSMEl0021D14f Hordeum vulgare spike... 157 4e-045
gb|BI953138.1|BI953138 HVSMEm0011D12f Hordeum vulgare green... 177 5e-045
gb|BF623190.3|BF623190 HVSMEa0015C04f Hordeum vulgare seedl... 145 9e-045
gb|BJ548512.1|BJ548512 BJ548512 K. Sato unpublished cDNA li... 106 1e-044
gb|BF624576.2|BF624576 HVSMEa0017C18f Hordeum vulgare seedl... 180 1e-044
gb|BE215347.2|BE215347 HV_CEb0006I19f Hordeum vulgare seedl... 180 1e-044
gb|BF623830.2|BF623830 HVSMEa0007D03f Hordeum vulgare seedl... 177 1e-043
gb|BF065899.1|BF065899 HV_CEb0014E21f Hordeum vulgare seedl... 150 1e-043
gb|BF065922.1|BF065922 HV_CEb0014F21f Hordeum vulgare seedl... 150 1e-043
gb|BE216017.1|BE216017 HV_CEb0009C05f Hordeum vulgare seedl... 177 1e-043
gb|BE602564.3|BE602564 HVSMEh0100A01f Hordeum vulgare 5-45 ... 177 1e-043
gb|AV923424.1|AV923424 AV923424 K. Sato unpublished cDNA li... 177 1e-043
gb|AV924773.1|AV924773 AV924773 K. Sato unpublished cDNA li... 177 1e-043
gb|AV926646.1|AV926646 AV926646 K. Sato unpublished cDNA li... 177 1e-043
gb|AV926802.1|AV926802 AV926802 K. Sato unpublished cDNA li... 177 1e-043
gb|AV933046.1|AV933046 AV933046 K. Sato unpublished cDNA li... 177 1e-043
gb|AV934138.1|AV934138 AV934138 K. Sato unpublished cDNA li... 177 1e-043
gb|BJ469586.1|BJ469586 BJ469586 K. Sato unpublished cDNA li... 177 1e-043
gb|BJ546871.1|BJ546871 BJ546871 K. Sato unpublished cDNA li... 177 1e-043
gb|BJ546949.1|BJ546949 BJ546949 K. Sato unpublished cDNA li... 177 1e-043
gb|BJ547042.1|BJ547042 BJ547042 K. Sato unpublished cDNA li... 177 1e-043
gb|BJ547269.1|BJ547269 BJ547269 K. Sato unpublished cDNA li... 177 1e-043
gb|BJ547290.1|BJ547290 BJ547290 K. Sato unpublished cDNA li... 177 1e-043
gb|BJ547507.1|BJ547507 BJ547507 K. Sato unpublished cDNA li... 177 1e-043
gb|BJ547528.1|BJ547528 BJ547528 K. Sato unpublished cDNA li... 177 1e-043
gb|BJ547611.1|BJ547611 BJ547611 K. Sato unpublished cDNA li... 177 1e-043
gb|BJ547661.1|BJ547661 BJ547661 K. Sato unpublished cDNA li... 177 1e-043
gb|BJ547685.1|BJ547685 BJ547685 K. Sato unpublished cDNA li... 177 1e-043
gb|BJ547768.1|BJ547768 BJ547768 K. Sato unpublished cDNA li... 177 1e-043
gb|BJ547797.1|BJ547797 BJ547797 K. Sato unpublished cDNA li... 177 1e-043
gb|BJ547881.1|BJ547881 BJ547881 K. Sato unpublished cDNA li... 177 1e-043
gb|BF065944.1|BF065944 HV_CEb0014G19f Hordeum vulgare seedl... 150 2e-043
gb|BF065968.1|BF065968 HV_CEb0014H19f Hordeum vulgare seedl... 150 2e-043
gb|BI953646.1|BI953646 HVSMEm0013K24f Hordeum vulgare green... 176 2e-043
gb|AV923513.1|AV923513 AV923513 K. Sato unpublished cDNA li... 176 2e-043
gb|BE559055.2|BE559055 HV_CEb0022I16f Hordeum vulgare seedl... 149 2e-043
gb|AL504826.1|AL504826 AL504826 Hordeum vulgare Barke roots... 176 3e-043
gb|BF622044.2|BF622044 HVSMEa0001J20f Hordeum vulgare seedl... 158 3e-043
gb|BI778185.2|BI778185 EBro07_SQ002_H11_R root, 3 week, red... 174 7e-043
gb|BG299996.1|BG299996 HVSMEa0022O20f Hordeum vulgare seedl... 173 1e-042
gb|BI948082.1|BI948082 HVSMEl0008C04f Hordeum vulgare spike... 169 2e-042
gb|BJ548403.1|BJ548403 BJ548403 K. Sato unpublished cDNA li... 99 2e-042
gb|BJ548926.1|BJ548926 BJ548926 K. Sato unpublished cDNA li... 99 2e-042
gb|BF259796.2|BF259796 HVSMEf0020E15f Hordeum vulgare seedl... 111 2e-042
gb|BQ472178.1|BQ472178 HV04K06r HV Hordeum vulgare subsp. v... 172 2e-042
gb|BQ765875.1|BQ765875 EBro03_SQ008_M07_R root, 3 week, wat... 172 2e-042
gb|AV925064.1|AV925064 AV925064 K. Sato unpublished cDNA li... 172 3e-042
gb|AV926037.1|AV926037 AV926037 K. Sato unpublished cDNA li... 172 3e-042
gb|AV934268.1|AV934268 AV934268 K. Sato unpublished cDNA li... 172 3e-042
gb|BI949614.1|BI949614 HVSMEl0014O15f Hordeum vulgare spike... 171 5e-042
gb|AV933552.1|AV933552 AV933552 K. Sato unpublished cDNA li... 171 5e-042
gb|BM375338.2|BM375338 EBem06_SQ003_A18_R embryo, 21 DPA, n... 127 5e-042
gb|BJ548749.1|BJ548749 BJ548749 K. Sato unpublished cDNA li... 97 7e-042
gb|BI949114.1|BI949114 HVSMEl0012G22f Hordeum vulgare spike... 170 1e-041
gb|BG299804.2|BG299804 HVSMEa0021O04f Hordeum vulgare seedl... 169 2e-041
gb|BF259078.2|BF259078 HVSMEf0017J19f Hordeum vulgare seedl... 94 4e-041
gb|BF623361.2|BF623361 HVSMEa0015I24f Hordeum vulgare seedl... 126 5e-041
gb|BJ549023.1|BJ549023 BJ549023 K. Sato unpublished cDNA li... 95 5e-041
gb|AV936388.1|AV936388 AV936388 K. Sato unpublished cDNA li... 95 5e-041
gb|BJ548710.1|BJ548710 BJ548710 K. Sato unpublished cDNA li... 95 5e-041
gb|CV058333.1|CV058333 BNEL36h8 Barley EST endosperm librar... 95 7e-041
gb|BI952081.1|BI952081 HVSMEm0004I21f Hordeum vulgare green... 166 2e-040
gb|BF623248.2|BF623248 HVSMEa0016A09f Hordeum vulgare seedl... 166 3e-040
gb|BG342989.2|BG342989 HVSMEg0001J14f Hordeum vulgare pre-a... 165 4e-040
gb|CA025935.1|CA025935 HZ53J07r HZ Hordeum vulgare subsp. v... 89 5e-040
gb|BF625851.2|BF625851 HVSMEa0013N14f Hordeum vulgare seedl... 111 6e-040
gb|AV935988.1|AV935988 AV935988 K. Sato unpublished cDNA li... 94 2e-039
gb|BJ547998.1|BJ547998 BJ547998 K. Sato unpublished cDNA li... 94 2e-039
gb|AV918927.1|AV918927 AV918927 K. Sato unpublished cDNA li... 95 2e-039
gb|BG299590.1|BG299590 HVSMEa0020O20f Hordeum vulgare seedl... 96 2e-039
gb|CA007742.1|CA007742 HU08O02r HU Hordeum vulgare subsp. v... 162 3e-039
gb|BF628237.2|BF628237 HVSMEb0003H24f Hordeum vulgare seedl... 162 4e-039
gb|BI946932.1|BI946932 HVSMEl0002N24f Hordeum vulgare spike... 162 4e-039
gb|BI948427.1|BI948427 HVSMEl0009I08f Hordeum vulgare spike... 162 4e-039
gb|BE214034.1|BE214034 HV_CEb0001P12f Hordeum vulgare seedl... 162 4e-039
gb|BE215069.1|BE215069 HV_CEb0005L08f Hordeum vulgare seedl... 162 4e-039
gb|BF630948.3|BF630948 HVSMEb0014I05f Hordeum vulgare seedl... 162 4e-039
gb|BQ740072.1|BQ740072 HC04F04 HC Hordeum vulgare subsp. vu... 162 4e-039
gb|AV922724.1|AV922724 AV922724 K. Sato unpublished cDNA li... 135 4e-039
gb|BF623533.3|BF623533 HVSMEa0002J15f Hordeum vulgare seedl... 161 5e-039
gb|BJ548529.1|BJ548529 BJ548529 K. Sato unpublished cDNA li... 94 5e-039
gb|BJ548320.1|BJ548320 BJ548320 K. Sato unpublished cDNA li... 94 5e-039
gb|AV927871.1|AV927871 AV927871 K. Sato unpublished cDNA li... 94 5e-039
gb|BF623386.2|BF623386 HVSMEa0016I09f Hordeum vulgare seedl... 161 7e-039
gb|BF257698.2|BF257698 HVSMEf0013K02f Hordeum vulgare seedl... 161 7e-039
gb|CA017465.1|CA017465 HV05E15r HV Hordeum vulgare subsp. v... 161 7e-039
gb|CA017476.1|CA017476 HV05F04r HV Hordeum vulgare subsp. v... 161 7e-039
gb|CA019652.1|CA019652 HV12K19r HV Hordeum vulgare subsp. v... 161 7e-039
gb|CA012122.1|CA012122 HT04I07r HT Hordeum vulgare subsp. v... 91 8e-039
gb|BE216829.1|BE216829 HV_CEb0011L16f Hordeum vulgare seedl... 160 1e-038
gb|BF267321.1|BF267321 HV_CEa0017J04f Hordeum vulgare seedl... 160 1e-038
gb|BQ766165.1|BQ766165 EBro08_SQ005_P05_R root, 3 week, dro... 160 1e-038
gb|BJ548174.1|BJ548174 BJ548174 K. Sato unpublished cDNA li... 94 2e-038
gb|BJ548536.1|BJ548536 BJ548536 K. Sato unpublished cDNA li... 94 2e-038
gb|AV937000.1|AV937000 AV937000 K. Sato unpublished cDNA li... 94 2e-038
gb|BF258960.3|BF258960 HVSMEf0017C18f Hordeum vulgare seedl... 159 2e-038
gb|BI947729.1|BI947729 HVSMEl0006K08f Hordeum vulgare spike... 159 3e-038
gb|BI949438.1|BI949438 HVSMEl0013O11f Hordeum vulgare spike... 113 4e-038
gb|AV929870.1|AV929870 AV929870 K. Sato unpublished cDNA li... 94 4e-038
gb|CA012898.1|CA012898 HT06M15r HT Hordeum vulgare subsp. v... 95 6e-038
gb|AV924070.1|AV924070 AV924070 K. Sato unpublished cDNA li... 158 6e-038
gb|AV932402.1|AV932402 AV932402 K. Sato unpublished cDNA li... 157 1e-037
gb|AL503233.1|AL503233 AL503233 Hordeum vulgare Barke roots... 111 1e-037
gb|BI952820.1|BI952820 HVSMEm0007N21f Hordeum vulgare green... 94 1e-037
gb|BI947132.1|BI947132 HVSMEl0003N16f Hordeum vulgare spike... 147 2e-037
gb|BF267193.3|BF267193 HV_CEa0017D12f Hordeum vulgare seedl... 155 3e-037
gb|BI948891.1|BI948891 HVSMEl0011E18f Hordeum vulgare spike... 155 6e-037
gb|BF627874.2|BF627874 HVSMEb0006C01f Hordeum vulgare seedl... 122 6e-037
gb|BJ548976.1|BJ548976 BJ548976 K. Sato unpublished cDNA li... 94 6e-037
gb|AV936756.1|AV936756 AV936756 K. Sato unpublished cDNA li... 94 6e-037
gb|BF622486.2|BF622486 HVSMEa0004I15f Hordeum vulgare seedl... 113 6e-037
gb|AV923925.1|AV923925 AV923925 K. Sato unpublished cDNA li... 154 8e-037
gb|BJ547072.1|BJ547072 BJ547072 K. Sato unpublished cDNA li... 154 8e-037
gb|BQ471258.1|BQ471258 HV01N17T HV Hordeum vulgare subsp. v... 109 8e-037
gb|BI947723.1|BI947723 HVSMEl0006J20f Hordeum vulgare spike... 110 2e-036
gb|BF253897.2|BF253897 HVSMEf0002G20f Hordeum vulgare seedl... 152 3e-036
gb|BJ548840.1|BJ548840 BJ548840 K. Sato unpublished cDNA li... 94 3e-036
gb|BJ546858.1|BJ546858 BJ546858 K. Sato unpublished cDNA li... 152 4e-036
gb|BJ547741.1|BJ547741 BJ547741 K. Sato unpublished cDNA li... 152 4e-036
gb|BJ547849.1|BJ547849 BJ547849 K. Sato unpublished cDNA li... 152 4e-036
gb|BF626467.2|BF626467 HVSMEa0018H19f Hordeum vulgare seedl... 151 5e-036
gb|BI954235.1|BI954235 HVSMEm0016M03f Hordeum vulgare green... 85 8e-036
gb|BI949705.1|BI949705 HVSMEl0015H08f Hordeum vulgare spike... 94 8e-036
gb|BF623987.2|BF623987 HVSMEa0008F14f Hordeum vulgare seedl... 85 8e-036
gb|CA003018.1|CA003018 HS09C19r HS Hordeum vulgare subsp. v... 150 1e-035
gb|BQ763153.1|BQ763153 EBro02_SQ007_K08_R root, 3 week, hyd... 101 1e-035
gb|BF065573.1|BF065573 HV_CEb0012M23f Hordeum vulgare seedl... 149 3e-035
gb|BF065604.1|BF065604 HV_CEb0012O15f Hordeum vulgare seedl... 149 3e-035
gb|BE215757.1|BE215757 HV_CEb0008G14f Hordeum vulgare seedl... 149 4e-035
gb|BE216520.1|BE216520 HV_CEb0010L11f Hordeum vulgare seedl... 149 4e-035
gb|BF266117.2|BF266117 HV_CEa0014D16f Hordeum vulgare seedl... 149 4e-035
gb|BF267384.2|BF267384 HV_CEa0017M06f Hordeum vulgare seedl... 148 5e-035
gb|BJ546968.1|BJ546968 BJ546968 K. Sato unpublished cDNA li... 148 5e-035
gb|BJ547144.1|BJ547144 BJ547144 K. Sato unpublished cDNA li... 148 5e-035
gb|BJ547972.1|BJ547972 BJ547972 K. Sato unpublished cDNA li... 94 1e-034
gb|CA028145.1|CA028145 HZ61C04r HZ Hordeum vulgare subsp. v... 64 1e-034
gb|BI959586.1|BI959586 HVSMEn0020E21f Hordeum vulgare rachi... 64 2e-034
gb|BF255671.2|BF255671 HVSMEf0007H20f Hordeum vulgare seedl... 93 2e-034
gb|CK122333.1|CK122333 BES1824102o06 BES1824 Hordeum vulgar... 64 3e-034
gb|BE411006.1|BE411006 ISC001.D03F990519 ITEC ISC Barley Le... 145 3e-034
gb|BJ546927.1|BJ546927 BJ546927 K. Sato unpublished cDNA li... 124 3e-034
gb|BE558770.2|BE558770 HV_CEb0020E13f Hordeum vulgare seedl... 64 4e-034
gb|BF622296.2|BF622296 HVSMEa0002K01f Hordeum vulgare seedl... 91 4e-034
gb|BJ548248.1|BJ548248 BJ548248 K. Sato unpublished cDNA li... 105 4e-034
gb|BI954877.1|BI954877 HVSMEm0020D03f Hordeum vulgare green... 85 4e-034
gb|BG415869.2|BG415869 HVSMEk0008G04f Hordeum vulgare testa... 145 5e-034
gb|BF620788.2|BF620788 HVSMEc0020N16f Hordeum vulgare seedl... 64 5e-034
gb|BI948019.1|BI948019 HVSMEl0007N21f Hordeum vulgare spike... 144 6e-034
gb|BI953615.1|BI953615 HVSMEm0013J07f Hordeum vulgare green... 82 8e-034
gb|BE214864.3|BE214864 HV_CEb0004O15f Hordeum vulgare seedl... 95 8e-034
gb|AF109194.1|AF109194 Hordeum vulgare glutathione-S-transf... 64 9e-034
gb|CV060337.1|CV060337 BNEL57a4 Barley EST endosperm librar... 70 1e-033
gb|CA024893.1|CA024893 HZ50K02r HZ Hordeum vulgare subsp. v... 64 1e-033
gb|AJ435107.1|AJ435107 AJ435107 S00002 Hordeum vulgare subs... 90 2e-033
gb|BF255189.1|BF255189 HVSMEf0006D04f Hordeum vulgare seedl... 96 2e-033
gb|BQ460114.1|BQ460114 HA07C20r HA Hordeum vulgare subsp. v... 64 2e-033
gb|CA001613.1|CA001613 HS05B06r HS Hordeum vulgare subsp. v... 64 2e-033
gb|BF619363.2|BF619363 HVSMEc0016M05f Hordeum vulgare seedl... 64 3e-033
gb|CA015590.1|CA015590 HT14M12r HT Hordeum vulgare subsp. v... 65 6e-033
gb|CA015289.1|CA015289 HT13N17r HT Hordeum vulgare subsp. v... 65 7e-033
gb|CA013624.1|CA013624 HT09A14r HT Hordeum vulgare subsp. v... 65 7e-033
gb|BQ464763.1|BQ464763 HU01G03T HU Hordeum vulgare subsp. v... 65 7e-033
gb|CA014093.1|CA014093 HT10F20r HT Hordeum vulgare subsp. v... 65 8e-033
gb|CA014392.1|CA014392 HT11D14r HT Hordeum vulgare subsp. v... 65 8e-033
gb|CA014271.1|CA014271 HT10O05r HT Hordeum vulgare subsp. v... 65 8e-033
gb|BE196654.3|BE196654 HVSMEh0092O09f Hordeum vulgare 5-45 ... 64 9e-033
gb|BI947656.1|BI947656 HVSMEl0006E19f Hordeum vulgare spike... 91 1e-032
gb|BU998635.1|BU998635 HI11L03r HI Hordeum vulgare subsp. v... 100 1e-032
gb|BF259240.3|BF259240 HVSMEf0018G18f Hordeum vulgare seedl... 107 1e-032
gb|BE216795.2|BE216795 HV_CEb0011J18f Hordeum vulgare seedl... 140 1e-032
gb|CA015258.1|CA015258 HT13M04r HT Hordeum vulgare subsp. v... 65 2e-032
gb|CA015381.1|CA015381 HT14C07r HT Hordeum vulgare subsp. v... 65 2e-032
gb|BF265689.1|BF265689 HV_CEa0013B06f Hordeum vulgare seedl... 64 2e-032
gb|BF623115.2|BF623115 HVSMEa0014H14f Hordeum vulgare seedl... 106 4e-032
gb|BI960661.1|BI960661 HVSMEn0025K13f Hordeum vulgare rachi... 138 4e-032
gb|BF255920.2|BF255920 HVSMEf0008D10f Hordeum vulgare seedl... 90 5e-032
gb|BQ767689.1|BQ767689 EBro08_SQ009_H13_R root, 3 week, dro... 81 1e-031
gb|AV932609.1|AV932609 AV932609 K. Sato unpublished cDNA li... 64 1e-031
gb|AL450842.1|AL450842 AL450842 Hordeum vulgare Barke etiol... 94 1e-031
gb|BF624504.3|BF624504 HVSMEa0016N24f Hordeum vulgare seedl... 137 1e-031
gb|BF619549.2|BF619549 HVSMEc0004A15f Hordeum vulgare seedl... 64 2e-031
gb|CV058068.1|CV058068 BNEL34a12 Barley EST endosperm libra... 91 2e-031
gb|BF260718.2|BF260718 HVSMEf0022M04f Hordeum vulgare seedl... 103 3e-031
gb|BF626393.3|BF626393 HVSMEa0018A21f Hordeum vulgare seedl... 92 3e-031
gb|AV834409.1|AV834409 AV834409 K. Sato unpublished cDNA li... 135 4e-031
gb|BJ471554.1|BJ471554 BJ471554 K. Sato unpublished cDNA li... 64 4e-031
gb|BJ548533.1|BJ548533 BJ548533 K. Sato unpublished cDNA li... 94 6e-031
gb|AV931720.1|AV931720 AV931720 K. Sato unpublished cDNA li... 94 6e-031
gb|BF254690.2|BF254690 HVSMEf0004L23f Hordeum vulgare seedl... 134 7e-031
gb|CA012182.1|CA012182 HT04L19r HT Hordeum vulgare subsp. v... 64 9e-031
gb|BJ548842.1|BJ548842 BJ548842 K. Sato unpublished cDNA li... 94 1e-030
gb|BF253803.2|BF253803 HVSMEf0002C17f Hordeum vulgare seedl... 103 1e-030
gb|BF260845.2|BF260845 HVSMEf0023B13f Hordeum vulgare seedl... 111 1e-030
gb|BQ766637.1|BQ766637 EBro08_SQ006_N18_R root, 3 week, dro... 99 2e-030
gb|CA027071.1|CA027071 HZ57M23r HZ Hordeum vulgare subsp. v... 100 2e-030
gb|BF622298.2|BF622298 HVSMEa0002K03f Hordeum vulgare seedl... 91 2e-030
gb|AV928806.1|AV928806 AV928806 K. Sato unpublished cDNA li... 94 3e-030
gb|BF626269.2|BF626269 HVSMEa0018D07f Hordeum vulgare seedl... 92 4e-030
gb|BI955294.1|BI955294 HVSMEm0022F18f Hordeum vulgare green... 85 4e-030
gb|BF258539.2|BF258539 HVSMEf0016A04f Hordeum vulgare seedl... 102 6e-030
gb|BF624808.3|BF624808 HVSMEa0017M20f Hordeum vulgare seedl... 84 7e-030
gb|BF257083.2|BF257083 HVSMEf0011M23f Hordeum vulgare seedl... 84 7e-030
gb|AV936609.1|AV936609 AV936609 K. Sato unpublished cDNA li... 94 1e-029
gb|BE216067.2|BE216067 HV_CEb0009E21f Hordeum vulgare seedl... 61 1e-029
gb|BJ546861.1|BJ546861 BJ546861 K. Sato unpublished cDNA li... 130 2e-029
gb|BJ547544.1|BJ547544 BJ547544 K. Sato unpublished cDNA li... 130 2e-029
gb|BQ467510.1|BQ467510 HS04A05r HS Hordeum vulgare subsp. v... 64 4e-029
gb|BF625649.2|BF625649 HVSMEa0013B21f Hordeum vulgare seedl... 64 4e-029
gb|BQ467646.1|BQ467646 HS04G23r HS Hordeum vulgare subsp. v... 64 4e-029
gb|CA029484.1|CA029484 HZ65F17r HZ Hordeum vulgare subsp. v... 64 4e-029
gb|CA001781.1|CA001781 HS05J03r HS Hordeum vulgare subsp. v... 64 4e-029
gb|CA023217.1|CA023217 HZ45J07r HZ Hordeum vulgare subsp. v... 64 4e-029
gb|CA004080.1|CA004080 HS16H17r HS Hordeum vulgare subsp. v... 65 4e-029
gb|BQ765092.1|BQ765092 EBca01_SQ005_D19_R carpel, pre-anthe... 64 6e-029
gb|BI776549.2|BI776549 EBpi05_SQ001_N14_R pistil, 8 DPA, no... 64 6e-029
gb|BI954642.1|BI954642 HVSMEm0018P22f Hordeum vulgare green... 116 9e-029
gb|BM369749.2|BM369749 EBem07_SQ004_H24_R embryo, 28 DPA, n... 64 1e-028
gb|AV926829.1|AV926829 AV926829 K. Sato unpublished cDNA li... 127 1e-028
gb|BM442945.2|BM442945 EBro02_SQ001_P16_R root, 3 week, hyd... 127 1e-028
gb|BF623684.2|BF623684 HVSMEa0003M02f Hordeum vulgare seedl... 65 1e-028
gb|BI948705.1|BI948705 HVSMEl0010J03f Hordeum vulgare spike... 65 2e-028
gb|BF625356.2|BF625356 HVSMEa0008J19f Hordeum vulgare seedl... 111 2e-028
gb|BF256380.2|BF256380 HVSMEf0009H03f Hordeum vulgare seedl... 125 4e-028
gb|BF258410.2|BF258410 HVSMEf0015K10f Hordeum vulgare seedl... 59 4e-028
gb|BF268066.2|BF268066 HV_CEa0019M05f Hordeum vulgare seedl... 62 5e-028
gb|CA004703.1|CA004703 HS18G22r HS Hordeum vulgare subsp. v... 125 5e-028
gb|CA027668.1|CA027668 HZ59K12r HZ Hordeum vulgare subsp. v... 64 1e-027
gb|BJ547767.1|BJ547767 BJ547767 K. Sato unpublished cDNA li... 124 1e-027
gb|BI949974.1|BI949974 HVSMEl0017G12f Hordeum vulgare spike... 65 1e-027
gb|BF259824.3|BF259824 HVSMEf0020F20f Hordeum vulgare seedl... 92 2e-027
gb|BQ766061.1|BQ766061 EBro03_SQ008_N21_R root, 3 week, wat... 81 3e-027
gb|BM442923.2|BM442923 EBro02_SQ001_N17_R root, 3 week, hyd... 103 6e-027
gb|BF253797.2|BF253797 HVSMEf0002C11f Hordeum vulgare seedl... 102 8e-027
gb|BQ664112.1|BQ664112 HV01N17w HV Hordeum vulgare subsp. v... 78 8e-027
gb|BQ466475.1|BQ466475 HT02K07r HT Hordeum vulgare subsp. v... 65 9e-027
gb|BI950563.1|BI950563 HVSMEl0021F15f Hordeum vulgare spike... 88 1e-026
gb|CA018522.1|CA018522 HV08O01r HV Hordeum vulgare subsp. v... 94 2e-026
gb|AV933636.1|AV933636 AV933636 K. Sato unpublished cDNA li... 119 2e-026
gb|BJ546903.1|BJ546903 BJ546903 K. Sato unpublished cDNA li... 119 2e-026
gb|BJ547398.1|BJ547398 BJ547398 K. Sato unpublished cDNA li... 119 2e-026
gb|BQ466550.1|BQ466550 HT02N19r HT Hordeum vulgare subsp. v... 65 4e-026
gb|BF622350.1|BF622350 HVSMEa0002O12f Hordeum vulgare seedl... 118 5e-026
gb|BM375129.2|BM375129 EBem06_SQ002_H03_R embryo, 21 DPA, n... 118 5e-026
gb|BQ466342.1|BQ466342 HT02E05r HT Hordeum vulgare subsp. v... 65 7e-026
gb|BE214462.2|BE214462 HV_CEb0003I11f Hordeum vulgare seedl... 117 9e-026
gb|BJ546043.1|BJ546043 BJ546043 K. Sato unpublished cDNA li... 86 9e-026
gb|BJ545696.1|BJ545696 BJ545696 K. Sato unpublished cDNA li... 86 9e-026
gb|BJ547109.1|BJ547109 BJ547109 K. Sato unpublished cDNA li... 117 1e-025
gb|BE602348.2|BE602348 HVSMEh0098J09f Hordeum vulgare 5-45 ... 116 2e-025
gb|BJ548881.1|BJ548881 BJ548881 K. Sato unpublished cDNA li... 76 2e-025
gb|BI949279.1|BI949279 HVSMEl0013C05f Hordeum vulgare spike... 116 2e-025
gb|BF623515.3|BF623515 HVSMEa0002H21f Hordeum vulgare seedl... 57 3e-025
gb|BF261927.2|BF261927 HV_CEa0002J15f Hordeum vulgare seedl... 96 6e-025
gb|BF255868.2|BF255868 HVSMEf0008A20f Hordeum vulgare seedl... 57 9e-025
gb|BF256426.3|BF256426 HVSMEf0009J14f Hordeum vulgare seedl... 105 1e-024
gb|BE196145.3|BE196145 HVSMEh0091H19f Hordeum vulgare 5-45 ... 64 2e-024
gb|CA003236.1|CA003236 HS09N04r HS Hordeum vulgare subsp. v... 80 4e-024
gb|CA027026.1|CA027026 HZ57K21r HZ Hordeum vulgare subsp. v... 64 4e-024
gb|BF267015.2|BF267015 HV_CEa0016L05f Hordeum vulgare seedl... 70 8e-024
gb|CA004785.1|CA004785 HS18K23r HS Hordeum vulgare subsp. v... 65 4e-023
gb|CA029001.1|CA029001 HZ63O10r HZ Hordeum vulgare subsp. v... 64 4e-023
gb|AV834582.1|AV834582 AV834582 K. Sato unpublished cDNA li... 72 5e-023
gb|AJ435050.1|AJ435050 AJ435050 S00002 Hordeum vulgare subs... 92 5e-023
gb|CA028873.1|CA028873 HZ63H22r HZ Hordeum vulgare subsp. v... 64 7e-023
gb|CA027925.1|CA027925 HZ60H09r HZ Hordeum vulgare subsp. v... 64 9e-023
gb|BQ469646.1|BQ469646 HZ01H04r HZ Hordeum vulgare subsp. v... 64 2e-022
gb|CA017560.1|CA017560 HV05I24r HV Hordeum vulgare subsp. v... 105 3e-022
gb|BF254945.2|BF254945 HVSMEf0005H21f Hordeum vulgare seedl... 62 4e-022
gb|CA018052.1|CA018052 HV07E12r HV Hordeum vulgare subsp. v... 80 1e-021
gb|BF624359.3|BF624359 HVSMEa0014E11f Hordeum vulgare seedl... 91 1e-021
gb|BE215767.2|BE215767 HV_CEb0008G24f Hordeum vulgare seedl... 86 2e-021
gb|BF622945.3|BF622945 HVSMEa0012E03f Hordeum vulgare seedl... 102 3e-021
gb|BF259210.2|BF259210 HVSMEf0018C22f Hordeum vulgare seedl... 81 4e-021
gb|BG415059.1|BG415059 HVSMEk0004P20f Hordeum vulgare testa... 87 4e-021
gb|BQ763720.1|BQ763720 EBro03_SQ005_A10_R root, 3 week, wat... 81 4e-021
gb|CA025920.1|CA025920 HZ53I14r HZ Hordeum vulgare subsp. v... 64 5e-021
gb|BJ548020.1|BJ548020 BJ548020 K. Sato unpublished cDNA li... 63 7e-021
>gb|AL503324.1|AL503324 AL503324 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW01K08T 5', mRNA sequence
Length = 700
Score = 193 bits (416), Expect(2) = 3e-069
Identities = 76/114 (66%), Positives = 93/114 (81%)
Frame = +2 / +2
Query: 89 MAGDNDLKVLGVWTSPFVIRVRIVLNLKGLAYEYVEEDLSNKSALLLGSNPVHKSVPVLL 268
MAG DLK+LG W SPFV RV++ L+LKGL++E VEEDL NKS LLL SNPVHK VPVL+
Sbjct: 44 MAGGEDLKLLGAWASPFVTRVKLALSLKGLSFEDVEEDLGNKSELLLSSNPVHKKVPVLV 223
Query: 269 HAGRAINESQVILQYIDEVWAGTGPDVLPADPYERAVARFWGAYIDDKVESAWL 430
H G+ + ES +ILQYIDE +AG GP +LP+DPY+RAVARFW AYIDDK+ + W+
Sbjct: 224 HNGKPVCESVIILQYIDEAFAGIGPSLLPSDPYQRAVARFWAAYIDDKLVAPWV 385
Score = 89.5 bits (189), Expect(2) = 3e-069
Identities = 32/68 (47%), Positives = 44/68 (64%)
Frame = +2 / +2
Query: 521 RDCSRGRPFFGGDDIGFVDAVLGGYLGWFGAVGRIIGSRLIDPARTPLLAAWEDRFRAAD 700
R+CS+G +FGG+ +G VD LG L W A + G+++ DP +TPLLAAW DRF D
Sbjct: 473 RECSKGEGYFGGETVGLVDVSLGSLLSWLNATEVMSGTKIFDPVKTPLLAAWMDRFSELD 652
Query: 701 VAKGVVPD 724
AK +P+
Sbjct: 653 AAKAALPE 676
Score = 83.5 bits (176), Expect(2) = 3e-023
Identities = 46/116 (39%), Positives = 55/116 (47%)
Frame = -3 / -2
Query: 429 SHADSTLSSMYAPQNXXXXXXXXXXXXXXGPVPAHTSSMYCRMTWDSFMARPAWRSTGTL 250
+H ++LSSM A Q GP+PA+ SSMY RM DS P STGT
Sbjct: 384 THGATSLSSM*AAQKRATARW*GSEGRREGPMPANASSMY*RMITDSHTGFPL*TSTGTF 205
Query: 249 LCTGLDPXXXXXXXXXXXXXXXXXRPFRLSTMRTRITNGLVHTPSTFRSLSPAIGS 82
LCTG + RP RLS T +TNGL PS+FRS PA+ S
Sbjct: 204 LCTGFELRRSSLLLPRSSSTSSKLRPLRLSASFTLVTNGLAQAPSSFRSSPPAMVS 37
Score = 45.5 bits (93), Expect(2) = 3e-023
Identities = 26/66 (39%), Positives = 29/66 (43%)
Frame = -3 / -2
Query: 726 SSGTTPLXXXXXXXXXXXXXXSGVRAGSMSLLPMILPTAPNQPRYPPSTASTNPMSSPPK 547
+SG L SGV GS L+P I A NQ PS ST+P SPPK
Sbjct: 678 TSGNAALAASSSLKRSIHAAKSGVLTGSKILVPDITSVAFNQESKLPSETSTSPTVSPPK 499
Query: 546 NGLPLE 529
PLE
Sbjct: 498 *PSPLE 481
>gb|BF621550.2|BF621550 HVSMEa0011F24f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0011F24f, mRNA sequence
Length = 808
Score = 193 bits (416), Expect(2) = 3e-068
Identities = 76/114 (66%), Positives = 93/114 (81%)
Frame = +2 / +2
Query: 89 MAGDNDLKVLGVWTSPFVIRVRIVLNLKGLAYEYVEEDLSNKSALLLGSNPVHKSVPVLL 268
MAG DLK+LG W SPFV RV++ L+LKGL++E VEEDL NKS LLL SNPVHK VPVL+
Sbjct: 62 MAGGEDLKLLGAWASPFVTRVKLALSLKGLSFEDVEEDLGNKSELLLSSNPVHKKVPVLV 241
Query: 269 HAGRAINESQVILQYIDEVWAGTGPDVLPADPYERAVARFWGAYIDDKVESAWL 430
H G+ + ES +ILQYIDE +AG GP +LP+DPY+RAVARFW AYIDDK+ + W+
Sbjct: 242 HNGKPVCESVIILQYIDEAFAGIGPSLLPSDPYQRAVARFWAAYIDDKLVAPWV 403
Score = 86.3 bits (182), Expect(2) = 3e-068
Identities = 31/68 (45%), Positives = 43/68 (63%)
Frame = +2 / +2
Query: 521 RDCSRGRPFFGGDDIGFVDAVLGGYLGWFGAVGRIIGSRLIDPARTPLLAAWEDRFRAAD 700
R+CS+G +FGG+ +G VD LG L W A + G+++ DP +TPLLAAW DR D
Sbjct: 491 RECSKGEGYFGGETVGLVDVSLGSLLSWLNATEVMSGTKIFDPVKTPLLAAWMDRXSELD 670
Query: 701 VAKGVVPD 724
AK +P+
Sbjct: 671 AAKAALPE 694
Score = 83.5 bits (176), Expect(2) = 3e-023
Identities = 46/116 (39%), Positives = 55/116 (47%)
Frame = -3 / -2
Query: 429 SHADSTLSSMYAPQNXXXXXXXXXXXXXXGPVPAHTSSMYCRMTWDSFMARPAWRSTGTL 250
+H ++LSSM A Q GP+PA+ SSMY RM DS P STGT
Sbjct: 402 THGATSLSSM*AAQKRATARW*GSEGRREGPMPANASSMY*RMITDSHTGFPL*TSTGTF 223
Query: 249 LCTGLDPXXXXXXXXXXXXXXXXXRPFRLSTMRTRITNGLVHTPSTFRSLSPAIGS 82
LCTG + RP RLS T +TNGL PS+FRS PA+ S
Sbjct: 222 LCTGFELRRSSLLLPRSSSTSSKLRPLRLSASFTLVTNGLAQAPSSFRSSPPAMVS 55
Score = 45.5 bits (93), Expect(2) = 3e-023
Identities = 27/66 (40%), Positives = 30/66 (45%)
Frame = -3 / -2
Query: 726 SSGTTPLXXXXXXXXXXXXXXSGVRAGSMSLLPMILPTAPNQPRYPPSTASTNPMSSPPK 547
+SG L SGV GS L+P I A NQ PS ST+P SPPK
Sbjct: 696 TSGNAALAASSSLXRSIHAAKSGVLTGSKILVPDITSVAFNQESKLPSETSTSPTVSPPK 517
Query: 546 NGLPLE 529
PLE
Sbjct: 516 *PSPLE 499
>gb|BF622215.3|BF622215 HVSMEa0002A20f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0002A20f, mRNA sequence
Length = 846
Score = 193 bits (416), Expect(2) = 7e-068
Identities = 76/114 (66%), Positives = 93/114 (81%)
Frame = +2 / +1
Query: 89 MAGDNDLKVLGVWTSPFVIRVRIVLNLKGLAYEYVEEDLSNKSALLLGSNPVHKSVPVLL 268
MAG DLK+LG W SPFV RV++ L+LKGL++E VEEDL NKS LLL SNPVHK VPVL+
Sbjct: 64 MAGGEDLKLLGAWASPFVTRVKLALSLKGLSFEDVEEDLGNKSELLLSSNPVHKKVPVLV 243
Query: 269 HAGRAINESQVILQYIDEVWAGTGPDVLPADPYERAVARFWGAYIDDKVESAWL 430
H G+ + ES +ILQYIDE +AG GP +LP+DPY+RAVARFW AYIDDK+ + W+
Sbjct: 244 HNGKPVCESVIILQYIDEAFAGIGPSLLPSDPYQRAVARFWAAYIDDKLVAPWV 405
Score = 84.9 bits (179), Expect(2) = 7e-068
Identities = 32/66 (48%), Positives = 42/66 (63%)
Frame = +2 / +1
Query: 521 RDCSRGRPFFGGDDIGFVDAVLGGYLGWFGAVGRIIGSRLIDPARTPLLAAWEDRFRAAD 700
R+CS+G +FGG+ +G VD LG L W A + G+++ DP +TPLLAAW DRF D
Sbjct: 493 RECSKGEGYFGGETVGLVDVSLGSLLSWLNATEVMSGTKIFDPVKTPLLAAWMDRFYQLD 672
Query: 701 VAKGVV 718
AK V
Sbjct: 673 AAKAGV 690
Score = 83.5 bits (176), Expect(2) = 3e-022
Identities = 46/116 (39%), Positives = 55/116 (47%)
Frame = -3 / -2
Query: 429 SHADSTLSSMYAPQNXXXXXXXXXXXXXXGPVPAHTSSMYCRMTWDSFMARPAWRSTGTL 250
+H ++LSSM A Q GP+PA+ SSMY RM DS P STGT
Sbjct: 404 THGATSLSSM*AAQKRATARW*GSEGRREGPMPANASSMY*RMITDSHTGFPL*TSTGTF 225
Query: 249 LCTGLDPXXXXXXXXXXXXXXXXXRPFRLSTMRTRITNGLVHTPSTFRSLSPAIGS 82
LCTG + RP RLS T +TNGL PS+FRS PA+ S
Sbjct: 224 LCTGFELRRSSLLLPRSSSTSSKLRPLRLSASFTLVTNGLAQAPSSFRSSPPAMVS 57
Score = 41.8 bits (85), Expect(2) = 3e-022
Identities = 22/44 (50%), Positives = 24/44 (54%)
Frame = -3 / -2
Query: 660 GVRAGSMSLLPMILPTAPNQPRYPPSTASTNPMSSPPKNGLPLE 529
GV GS L+P I A NQ PS ST+P SPPK PLE
Sbjct: 632 GVLTGSKILVPDITSVAFNQESKLPSETSTSPTVSPPK*PSPLE 501
>gb|BF622224.2|BF622224 HVSMEa0002C05f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0002C05f, mRNA sequence
Length = 705
Score = 193 bits (416), Expect(2) = 6e-067
Identities = 76/114 (66%), Positives = 93/114 (81%)
Frame = +2 / +1
Query: 89 MAGDNDLKVLGVWTSPFVIRVRIVLNLKGLAYEYVEEDLSNKSALLLGSNPVHKSVPVLL 268
MAG DLK+LG W SPFV RV++ L+LKGL++E VEEDL NKS LLL SNPVHK VPVL+
Sbjct: 61 MAGGEDLKLLGAWASPFVTRVKLALSLKGLSFEDVEEDLGNKSELLLSSNPVHKKVPVLV 240
Query: 269 HAGRAINESQVILQYIDEVWAGTGPDVLPADPYERAVARFWGAYIDDKVESAWL 430
H G+ + ES +ILQYIDE +AG GP +LP+DPY+RAVARFW AYIDDK+ + W+
Sbjct: 241 HNGKPVCESVIILQYIDEAFAGIGPSLLPSDPYQRAVARFWAAYIDDKLVAPWV 402
Score = 83.5 bits (176), Expect(2) = 3e-022
Identities = 46/116 (39%), Positives = 55/116 (47%)
Frame = -3 / -2
Query: 429 SHADSTLSSMYAPQNXXXXXXXXXXXXXXGPVPAHTSSMYCRMTWDSFMARPAWRSTGTL 250
+H ++LSSM A Q GP+PA+ SSMY RM DS P STGT
Sbjct: 401 THGATSLSSM*AAQKRATARW*GSEGRREGPMPANASSMY*RMITDSHTGFPL*TSTGTF 222
Query: 249 LCTGLDPXXXXXXXXXXXXXXXXXRPFRLSTMRTRITNGLVHTPSTFRSLSPAIGS 82
LCTG + RP RLS T +TNGL PS+FRS PA+ S
Sbjct: 221 LCTGFELRRSSLLLPRSSSTSSKLRPLRLSASFTLVTNGLAQAPSSFRSSPPAMVS 54
Score = 81.7 bits (172), Expect(2) = 6e-067
Identities = 30/66 (45%), Positives = 41/66 (62%)
Frame = +2 / +1
Query: 521 RDCSRGRPFFGGDDIGFVDAVLGGYLGWFGAVGRIIGSRLIDPARTPLLAAWEDRFRAAD 700
R+CS+G +FGG+ +G VD LG L W A + G+++ DP +TPLL AW DRF D
Sbjct: 490 RECSKGEGYFGGETVGLVDVSLGSLLSWLNATEVMSGTKIFDPVKTPLLPAWMDRFSELD 669
Query: 701 VAKGVV 718
+K V
Sbjct: 670 ASKAGV 687
Score = 41.8 bits (85), Expect(2) = 3e-022
Identities = 22/44 (50%), Positives = 24/44 (54%)
Frame = -3 / -2
Query: 660 GVRAGSMSLLPMILPTAPNQPRYPPSTASTNPMSSPPKNGLPLE 529
GV GS L+P I A NQ PS ST+P SPPK PLE
Sbjct: 629 GVLTGSKILVPDITSVAFNQESKLPSETSTSPTVSPPK*PSPLE 498
>gb|BE214393.3|BE214393 HV_CEb0003F04f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0003F04f, mRNA sequence
Length = 575
Score = 195 bits (420), Expect(2) = 5e-065
Identities = 78/96 (81%), Positives = 85/96 (88%)
Frame = +2 / -2
Query: 155 IVLNLKGLAYEYVEEDLSNKSALLLGSNPVHKSVPVLLHAGRAINESQVILQYIDEVWAG 334
+VL LK L YEYVEE+L +KSALLLGSNPVH+SVPVLLH GR +NESQVI+QYIDEVWAG
Sbjct: 472 VVLTLKSLPYEYVEENLGSKSALLLGSNPVHQSVPVLLHGGRPVNESQVIVQYIDEVWAG 293
Query: 335 TGPDVLPADPYERAVARFWGAYIDDKVESAWLGMLF 442
GP VLPADPYERAVARFW AY+DDKV SAW GMLF
Sbjct: 292 VGPSVLPADPYERAVARFWAAYVDDKVGSAWTGMLF 185
Score = 161 bits (347), Expect = 5e-039
Identities = 80/146 (54%), Positives = 89/146 (60%)
Frame = -2 / +2
Query: 583 HGVHEPDVVAAEEWPPPGAVPERALQRVERLAGARHRRRPLLLVRAPEQHPQPRRLHLVV 404
H V EPD VAAEE PPGA+ ERALQ ++R GA H RPLLL A E+HP+PRR LVV
Sbjct: 44 HDVDEPDGVAAEERLPPGALRERALQGLQRRHGAGHGLRPLLLRLAREEHPRPRRPDLVV 223
Query: 403 DVRAPEPRHRALVGVGRQHVRPRPRPHXXXXXXXXXXXVYGAAGVEEHRHALVHRVGPQX 224
DVR PE RH ALVGVGR+H R PRP V+GAA VEE RHALVHRVG Q
Sbjct: 224 DVRRPEARHGALVGVGREHRRADPRPDLVDVLHDDLGLVHGAAAVEEDRHALVHRVGAQE 403
Query: 223 XXXXXXXXXXXXXXRQALQVEHDADP 146
R+ L+ EH A P
Sbjct: 404 ERALAAQVLLHVLVRERLEGEHHAAP 481
Score = 157 bits (337), Expect = 1e-037
Identities = 72/156 (46%), Positives = 75/156 (48%)
Frame = -3 / +3
Query: 624 ILPTAPNQPRYPPSTASTNPMSSPPKNGLPLEQXXXXXXXXXXXXXXXXXXXXXXXXXAH 445
IL APN PR PPST STNPM+SPPKNG P E H
Sbjct: 3 ILSIAPNHPR*PPSTTSTNPMASPPKNGFPPEHSASAPSRVSSAATARDTXSALSSXVLH 182
Query: 444 LNSIPSHADSTLSSMYAPQNXXXXXXXXXXXXXXGPVPAHTSSMYCRMTWDSFMARPAWR 265
SIP HAD TLSS YA Q GP PA TSSMYC MTWDSF RP WR
Sbjct: 183 EKSIPVHADPTLSSTYAAQKRATARS*GSAGSTDGPTPAQTSSMYCTMTWDSFTGRPPWR 362
Query: 264 STGTLLCTGLDPXXXXXXXXXXXXXXXXXRPFRLST 157
TGTL CTGL+P R+ST
Sbjct: 363 RTGTLWCTGLEPKRSALLLPRFSSTYSYGSDLRVST 470
Score = 73.5 bits (154), Expect(2) = 5e-065
Identities = 26/34 (76%), Positives = 30/34 (88%)
Frame = +2 / -2
Query: 524 DCSRGRPFFGGDDIGFVDAVLGGYLGWFGAVGRI 625
+CS G+PFFGGD IGFVD VLGGYLGWFGA+ +I
Sbjct: 103 ECSGGKPFFGGDAIGFVDVVLGGYLGWFGAIDKI 2
>gb|BF631562.2|BF631562 HVSMEb0016G15f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0016G15f, mRNA sequence
Length = 830
Score = 174 bits (374), Expect(2) = 2e-064
Identities = 69/121 (57%), Positives = 94/121 (77%)
Frame = +2 / +1
Query: 62 EQSRKLELPMAGDNDLKVLGVWTSPFVIRVRIVLNLKGLAYEYVEEDLSNKSALLLGSNP 241
E S+ + G++++K+LG+W SPFV+R+++ L+LKG+AYEYVEEDL +KS LLL SNP
Sbjct: 4 EPSKTPAMAGGGNDEVKLLGMWASPFVLRIKLALSLKGVAYEYVEEDLKSKSELLLRSNP 183
Query: 242 VHKSVPVLLHAGRAINESQVILQYIDEVWAGTGPDVLPADPYERAVARFWGAYIDDKVES 421
V + VPVL+H G+ ++ES VILQYIDE +AG GP +LP +P+ RAVARFW AYID +
Sbjct: 184 VLQKVPVLIHDGKPVSESSVILQYIDEAFAGVGPSLLPEEPHGRAVARFWAAYIDGTLVK 363
Query: 422 A 424
A
Sbjct: 364 A 366
Score = 92.7 bits (196), Expect(2) = 2e-064
Identities = 35/68 (51%), Positives = 44/68 (64%)
Frame = +2 / +1
Query: 521 RDCSRGRPFFGGDDIGFVDAVLGGYLGWFGAVGRIIGSRLIDPARTPLLAAWEDRFRAAD 700
RDCS G+PFFGGD G+VD +LGG L W ++ G + DPA TPLLAAW D F +
Sbjct: 460 RDCSNGKPFFGGDTAGYVDVMLGGLLPWVHTSDKMKGVKTFDPATTPLLAAWADSFXSLG 639
Query: 701 VAKGVVPD 724
+ V+PD
Sbjct: 640 AVEAVMPD 663
Score = 84.5 bits (178), Expect(2) = 4e-026
Identities = 44/110 (40%), Positives = 49/110 (44%)
Frame = -3 / -1
Query: 423 ADSTLSSMYAPQNXXXXXXXXXXXXXXGPVPAHTSSMYCRMTWDSFMARPAWRSTGTLLC 244
A +++ SM A Q GP PA SSMYCRMT DS P+W STGT
Sbjct: 365 AFTSVPSM*AAQKRATARPWGSSGRSEGPTPAKASSMYCRMTDDSETGLPSWMSTGTFWS 186
Query: 243 TGLDPXXXXXXXXXXXXXXXXXRPFRLSTMRTRITNGLVHTPSTFRSLSP 94
TGLD P RLS R TNGL H PS+F S P
Sbjct: 185 TGLDLRSSSLLLLRSSSTYS*ATPLRLSASLIRRTNGLAHMPSSFTSSFP 36
Score = 54.2 bits (112), Expect(2) = 4e-026
Identities = 30/67 (44%), Positives = 31/67 (46%)
Frame = -3 / -1
Query: 726 SSGTTPLXXXXXXXXXXXXXXSGVRAGSMSLLPMILPTAPNQPRYPPSTASTNPMSSPPK 547
+SG T SGV AGS L P IL R PPS ST P SPPK
Sbjct: 665 TSGMTASTAPNDXKLSAHAAKSGVVAGSNVLTPFILSLVCTHGRRPPSITSTYPAVSPPK 486
Query: 546 NGLPLEQ 526
G PLEQ
Sbjct: 485 KGFPLEQ 465
>gb|BJ547778.1|BJ547778 BJ547778 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal39b17 5', mRNA sequence
Length = 653
Score = 177 bits (380), Expect(2) = 9e-064
Identities = 71/113 (62%), Positives = 87/113 (76%)
Frame = +2 / +2
Query: 98 DNDLKVLGVWTSPFVIRVRIVLNLKGLAYEYVEEDLSNKSALLLGSNPVHKSVPVLLHAG 277
+++LK+LG W PF +RVR+ LN KGL+YEY EEDL+NKS LLL SNPV+K VPVL+H G
Sbjct: 38 EHELKLLGTWRGPFALRVRLALNFKGLSYEYQEEDLANKSDLLLESNPVNKKVPVLIHNG 217
Query: 278 RAINESQVILQYIDEVWAGTGPDVLPADPYERAVARFWGAYIDDKVESAWLGM 436
I ES IL+YIDEV+ GTGP +LP DPY+RAVARFW AYID + + W M
Sbjct: 218 VPICESLAILEYIDEVYRGTGPCLLPGDPYQRAVARFWAAYIDQNLVAPWWKM 376
Score = 87.7 bits (185), Expect(2) = 9e-064
Identities = 31/65 (47%), Positives = 43/65 (66%)
Frame = +2 / +2
Query: 521 RDCSRGRPFFGGDDIGFVDAVLGGYLGWFGAVGRIIGSRLIDPARTPLLAAWEDRFRAAD 700
R+CS G+PFFGGD++G++D VLGG + W + G L+D +TPLL AW +RF +
Sbjct: 458 RECSSGKPFFGGDNVGYIDVVLGGMVAWMQGTEALCGLELLDATKTPLLLAWMERFGGME 637
Query: 701 VAKGV 715
AK V
Sbjct: 638 PAKAV 652
>gb|BJ547635.1|BJ547635 BJ547635 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal33l15 5', mRNA sequence
Length = 642
Score = 177 bits (380), Expect(2) = 2e-062
Identities = 71/113 (62%), Positives = 87/113 (76%)
Frame = +2 / +2
Query: 98 DNDLKVLGVWTSPFVIRVRIVLNLKGLAYEYVEEDLSNKSALLLGSNPVHKSVPVLLHAG 277
+++LK+LG W PF +RVR+ LN KGL+YEY EEDL+NKS LLL SNPV+K VPVL+H G
Sbjct: 38 EHELKLLGTWRGPFALRVRLALNFKGLSYEYQEEDLANKSDLLLESNPVNKKVPVLIHNG 217
Query: 278 RAINESQVILQYIDEVWAGTGPDVLPADPYERAVARFWGAYIDDKVESAWLGM 436
I ES IL+YIDEV+ GTGP +LP DPY+RAVARFW AYID + + W M
Sbjct: 218 VPICESLAILEYIDEVYRGTGPCLLPGDPYQRAVARFWAAYIDQNLVAPWWKM 376
Score = 83.1 bits (175), Expect(2) = 2e-062
Identities = 28/56 (50%), Positives = 39/56 (69%)
Frame = +2 / +2
Query: 521 RDCSRGRPFFGGDDIGFVDAVLGGYLGWFGAVGRIIGSRLIDPARTPLLAAWEDRF 688
R+CS G+PFFGGD++G++D VLGG + W + G L+D +TPLL AW +RF
Sbjct: 458 RECSSGKPFFGGDNVGYIDVVLGGMVAWMQGTEALCGLELLDATKTPLLLAWMERF 625
>gb|BM817225.1|BM817225 HC109B04_T3.ab1 HC Hordeum vulgare subsp. vulgare cDNA clone
HC109B04_T3.ab1 similar to Glutathione
transferase,Glycoprotein-fucosylgalactoside
alpha-galactosyltransferase,, mRNA sequence
Length = 897
Score = 189 bits (407), Expect(2) = 3e-062
Identities = 73/111 (65%), Positives = 92/111 (82%)
Frame = +2 / +2
Query: 95 GDNDLKVLGVWTSPFVIRVRIVLNLKGLAYEYVEEDLSNKSALLLGSNPVHKSVPVLLHA 274
G +++K+LG+W SPFV+R ++ L LKG+ YEYVEE+L+NKS L L SNPVHK+VPVL+H
Sbjct: 104 GGDEVKLLGMWASPFVVRAQLALRLKGVNYEYVEEELANKSDLFLRSNPVHKTVPVLIHD 283
Query: 275 GRAINESQVILQYIDEVWAGTGPDVLPADPYERAVARFWGAYIDDKVESAW 427
G+ I ESQVILQYIDE +AG GP +LPADPYERAVARFW AY++DK+ W
Sbjct: 284 GKPICESQVILQYIDEAFAGVGPSLLPADPYERAVARFWAAYVEDKLLPPW 436
Score = 100 bits (213), Expect(2) = 5e-028
Identities = 47/113 (41%), Positives = 53/113 (46%)
Frame = -3 / -1
Query: 426 HADSTLSSMYAPQNXXXXXXXXXXXXXXGPVPAHTSSMYCRMTWDSFMARPAWRSTGTLL 247
H S+LSS A Q GP PA SSMYCRMTWDS M P+W STGT+L
Sbjct: 435 HGGSSLSST*AAQKRATARS*GSAGRRDGPTPAKASSMYCRMTWDSQMGLPSWMSTGTVL 256
Query: 246 CTGLDPXXXXXXXXXXXXXXXXXRPFRLSTMRTRITNGLVHTPSTFRSLSPAI 88
CTGL+ P R S TNGL H PS+F S P +
Sbjct: 255 CTGLERRKRSLLLASSSSTYS*FTPLRRSASCALTTNGLAHMPSSFTSSPPLL 97
Score = 70.3 bits (147), Expect(2) = 3e-062
Identities = 25/52 (48%), Positives = 34/52 (65%)
Frame = +2 / +2
Query: 521 RDCSRGRPFFGGDDIGFVDAVLGGYLGWFGAVGRIIGSRLIDPARTPLLAAW 676
R CS G+ FFGGD +G+VD +LG + W A ++ G R+ D + PLLAAW
Sbjct: 527 RQCSEGKGFFGGDCVGYVDVLLGSIVPWVRATEKLSGDRVFDAGKAPLLAAW 682
Score = 44.6 bits (91), Expect(2) = 5e-028
Identities = 25/52 (48%), Positives = 28/52 (53%)
Frame = -2 / -3
Query: 577 VHEPDVVAAEEWPPPGAVPERALQRVERLAGARHRRRPLLLVRAPEQHPQPR 422
V PD VAAEE P A+P+ LQRV R RPLL+ R PE P R
Sbjct: 583 VDVPDAVAAEEPLPLRALPQAFLQRVHRRHRLPRPLRPLLVGRHPEHLPPRR 428
>gb|BF622265.2|BF622265 HVSMEa0002G13f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0002G13f, mRNA sequence
Length = 698
Score = 186 bits (400), Expect(2) = 8e-062
Identities = 72/116 (62%), Positives = 93/116 (80%)
Frame = +2 / +3
Query: 89 MAGDNDLKVLGVWTSPFVIRVRIVLNLKGLAYEYVEEDLSNKSALLLGSNPVHKSVPVLL 268
MA + DLK+LG+ SPFV+RVR+ L++KGL+YEY+E+DL NKS LLL SNPV K VPVL+
Sbjct: 24 MAAEGDLKLLGLSVSPFVVRVRMALHMKGLSYEYIEQDLFNKSELLLKSNPVEKKVPVLI 203
Query: 269 HAGRAINESQVILQYIDEVWAGTGPDVLPADPYERAVARFWGAYIDDKVESAWLGM 436
H G+ I +S I+QYIDEVWA GP +LP DPY+RA +RFW AY DDK+ SA++G+
Sbjct: 204 HDGKTILDSSAIVQYIDEVWAAMGPSILPVDPYDRAASRFWAAYADDKLFSAYVGI 371
Score = 72.1 bits (151), Expect(2) = 8e-062
Identities = 28/69 (40%), Positives = 38/69 (55%)
Frame = +2 / +3
Query: 518 FRDCSRGRPFFGGDDIGFVDAVLGGYLGWFGAVGRIIGSRLIDPARTPLLAAWEDRFRAA 697
F S G+ FF GD +G++D +G +L W A ++ G ++ RTPLL W RF
Sbjct: 450 FAKQSNGKAFFAGDSVGYLDLAVGCHLHWLKAQRKMFGVVFLEAGRTPLLTGWAKRFAET 629
Query: 698 DVAKGVVPD 724
D K VVPD
Sbjct: 630 DAGKEVVPD 656
>gb|AV933203.1|AV933203 AV933203 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal5m21 5', mRNA sequence
Length = 640
Score = 174 bits (375), Expect(2) = 1e-061
Identities = 71/110 (64%), Positives = 84/110 (76%)
Frame = +2 / +1
Query: 107 LKVLGVWTSPFVIRVRIVLNLKGLAYEYVEEDLSNKSALLLGSNPVHKSVPVLLHAGRAI 286
LK+LG W PF +RVR+ LN KGL+YEY EEDL+NKS LLL SNPV+K VPVL+H G I
Sbjct: 49 LKLLGTWRGPFALRVRLALNFKGLSYEYQEEDLANKSDLLLESNPVNKKVPVLIHNGVPI 228
Query: 287 NESQVILQYIDEVWAGTGPDVLPADPYERAVARFWGAYIDDKVESAWLGM 436
ES IL+YIDEV+ GTGP +LP DPY+RAVARFW AYID + + W M
Sbjct: 229 CESLAILEYIDEVYRGTGPCLLPGDPYQRAVARFWAAYIDQNLVAPWWKM 378
Score = 83.1 bits (175), Expect(2) = 1e-061
Identities = 28/56 (50%), Positives = 39/56 (69%)
Frame = +2 / +1
Query: 521 RDCSRGRPFFGGDDIGFVDAVLGGYLGWFGAVGRIIGSRLIDPARTPLLAAWEDRF 688
R+CS G+PFFGGD++G++D VLGG + W + G L+D +TPLL AW +RF
Sbjct: 460 RECSSGKPFFGGDNVGYIDVVLGGMVAWMQGTEALCGLELLDATKTPLLLAWMERF 627
>gb|BF622591.2|BF622591 HVSMEa0007C21f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0007C21f, mRNA sequence
Length = 694
Score = 187 bits (402), Expect(3) = 2e-061
Identities = 75/115 (65%), Positives = 92/115 (80%)
Frame = +2 / +3
Query: 83 LPMAGDNDLKVLGVWTSPFVIRVRIVLNLKGLAYEYVEEDLSNKSALLLGSNPVHKSVPV 262
L MAG +DLK+LG W SPFV RV++ L LKGL+YE VEE+LSNKS LLL SNPVHK +PV
Sbjct: 78 LEMAGGDDLKLLGAWPSPFVTRVKLALALKGLSYEDVEENLSNKSELLLKSNPVHKKIPV 257
Query: 263 LLHAGRAINESQVILQYIDEVWAGTGPDVLPADPYERAVARFWGAYIDDKVESAW 427
L+H G + ES +I+QYID+V+A TGP +L DPYERAVARFW AY+DDK+ + W
Sbjct: 258 LIHNGSPVCESMIIVQYIDDVFASTGPSLLSEDPYERAVARFWVAYVDDKLVAPW 422
Score = 62.5 bits (130), Expect(3) = 3e-021
Identities = 30/65 (46%), Positives = 32/65 (49%)
Frame = -3 / -1
Query: 426 HADSTLSSMYAPQNXXXXXXXXXXXXXXGPVPAHTSSMYCRMTWDSFMARPAWRSTGTLL 247
H ++LSS A Q GPV A TSSMYC M DS P W STG L
Sbjct: 421 HGATSLSST*ATQKRATARS*GSSDRRDGPVLAKTSSMYCTMIMDSHTGEPLWMSTGIFL 242
Query: 246 CTGLD 232
CTGLD
Sbjct: 241 CTGLD 227
Score = 51.0 bits (105), Expect(3) = 2e-061
Identities = 18/43 (41%), Positives = 25/43 (58%)
Frame = +2 / +3
Query: 521 RDCSRGRPFFGGDDIGFVDAVLGGYLGWFGAVGRIIGSRLIDP 649
R+CS+G FFGGD +G VD LGG + W + G + + P
Sbjct: 513 RECSKGGDFFGGDGVGLVDVALGGLVSWMKVTDVLYGGQDLRP 641
Score = 42.3 bits (86), Expect(3) = 3e-021
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = -3 / -1
Query: 174 PFRLSTMRTRITNGLVHTPSTFRSLSPAIGS 82
PF+ S T +TNGL H PS+FRS PAI +
Sbjct: 169 PFKASASFTLVTNGLGHAPSSFRSSPPAISN 77
Score = 37.3 bits (75), Expect(3) = 2e-061
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +2 / +1
Query: 629 GSRLIDPARTPLLAAWEDRFRAAD 700
G ++ DP +TPLLA WE+R D
Sbjct: 622 GDKIFDPVKTPLLALWEERLNPID 693
Score = 35.0 bits (70), Expect(3) = 3e-021
Identities = 14/25 (56%), Positives = 15/25 (60%)
Frame = -3 / -1
Query: 603 QPRYPPSTASTNPMSSPPKNGLPLE 529
Q PPS ST+P SPPK PLE
Sbjct: 595 QETSPPSATSTSPTPSPPKKSPPLE 521
>gb|AV913623.1|AV913623 AV913623 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags22l18 5', mRNA sequence
Length = 676
Score = 172 bits (371), Expect(2) = 5e-061
Identities = 67/111 (60%), Positives = 90/111 (81%)
Frame = +2 / +1
Query: 98 DNDLKVLGVWTSPFVIRVRIVLNLKGLAYEYVEEDLSNKSALLLGSNPVHKSVPVLLHAG 277
D++ K+LG + SPFV+R ++ L+ KGL++E VEEDL+NKS LLL SNP K VPVL+H G
Sbjct: 88 DDEPKLLGTFASPFVMRAKLALSFKGLSFEDVEEDLANKSELLLESNPAQKKVPVLIHNG 267
Query: 278 RAINESQVILQYIDEVWAGTGPDVLPADPYERAVARFWGAYIDDKVESAWL 430
+ + +SQVI+QYIDE ++G G +LPADPYERAVARFW AY+DDK+ ++WL
Sbjct: 268 KPVCDSQVIVQYIDEAFSGNGTSLLPADPYERAVARFWAAYVDDKLLASWL 420
Score = 82.6 bits (174), Expect(2) = 5e-061
Identities = 30/57 (52%), Positives = 40/57 (70%)
Frame = +2 / +1
Query: 518 FRDCSRGRPFFGGDDIGFVDAVLGGYLGWFGAVGRIIGSRLIDPARTPLLAAWEDRF 688
F+ CS G+PFFGGD +G++D LGG + W A + G RL D A++PLLAAW +RF
Sbjct: 505 FKACSNGKPFFGGDRVGYLDVTLGGLVVWVHAGAALYGMRLFDDAKSPLLAAWVERF 675
Score = 79.4 bits (167), Expect(2) = 4e-021
Identities = 38/106 (35%), Positives = 46/106 (43%)
Frame = -3 / -3
Query: 414 TLSSMYAPQNXXXXXXXXXXXXXXGPVPAHTSSMYCRMTWDSFMARPAWRSTGTLLCTGL 235
+LSS A Q P+P SSMYC MT +S P W STGT C GL
Sbjct: 404 SLSST*AAQKRATARS*GSAGRRDVPLPLKASSMYCTMTCESQTGLPLWMSTGTFFCAGL 225
Query: 234 DPXXXXXXXXXXXXXXXXXRPFRLSTMRTRITNGLVHTPSTFRSLS 97
D +P +LS R+TNGL + PS+F S S
Sbjct: 224 DSRRSSLLLARSSSTSSKLKPLKLSASFARMTNGLANVPSSFGSSS 87
Score = 42.3 bits (86), Expect(2) = 4e-021
Identities = 20/44 (45%), Positives = 22/44 (50%)
Frame = -3 / -3
Query: 660 GVRAGSMSLLPMILPTAPNQPRYPPSTASTNPMSSPPKNGLPLE 529
G+ A S S +P A Q PPS S P SPPK G PLE
Sbjct: 647 GLLASSNSRMPYSAAPACTQTTRPPSVTSRYPTLSPPKKGFPLE 516
>gb|BE421272.1|BE421272 HWM007.F01 ITEC HWM Barley Leaf Library Hordeum vulgare subsp.
vulgare cDNA clone HWM007.F01, mRNA sequence
Length = 734
Score = 177 bits (380), Expect(2) = 7e-061
Identities = 71/113 (62%), Positives = 87/113 (76%)
Frame = +2 / +2
Query: 98 DNDLKVLGVWTSPFVIRVRIVLNLKGLAYEYVEEDLSNKSALLLGSNPVHKSVPVLLHAG 277
+++LK+LG W PF +RVR+ LN KGL+YEY EEDL+NKS LLL SNPV+K VPVL+H G
Sbjct: 125 EHELKLLGTWRGPFALRVRLALNFKGLSYEYQEEDLANKSDLLLESNPVNKKVPVLIHNG 304
Query: 278 RAINESQVILQYIDEVWAGTGPDVLPADPYERAVARFWGAYIDDKVESAWLGM 436
I ES IL+YIDEV+ GTGP +LP DPY+RAVARFW AYID + + W M
Sbjct: 305 VPICESLAILEYIDEVYRGTGPCLLPGDPYQRAVARFWAAYIDQNLVAPWWKM 463
Score = 78.0 bits (164), Expect(2) = 7e-061
Identities = 27/62 (43%), Positives = 40/62 (64%)
Frame = +2 / +2
Query: 521 RDCSRGRPFFGGDDIGFVDAVLGGYLGWFGAVGRIIGSRLIDPARTPLLAAWEDRFRAAD 700
R+CS G+P FGGD++G++D VLGG + W + G L+D +TP+L AW +RF +
Sbjct: 545 RECSSGKPVFGGDNVGYIDVVLGGMVPWMQGTEALCGLELLDATKTPVLLAWMERFGGME 724
Query: 701 VA 706
A
Sbjct: 725 PA 730
>gb|BQ762933.1|BQ762933 EBro02_SQ006_H16 _R root, 3 week, hydroponic grown, low nitrogen,
cv Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA
clone EBro02_SQ006_H16 5', mRNA sequence
Length = 701
Score = 163 bits (351), Expect(2) = 2e-059
Identities = 64/107 (59%), Positives = 81/107 (75%)
Frame = +2 / +1
Query: 122 VWTSPFVIRVRIVLNLKGLAYEYVEEDLSNKSALLLGSNPVHKSVPVLLHAGRAINESQV 301
V SPFVIRVR+ L +K + YEY+E+DL K LLL SNPVH VPVL+H G++I ES
Sbjct: 4 VRVSPFVIRVRMALQMKRVGYEYMEQDLFTKGELLLKSNPVHMKVPVLIHDGKSICESLA 183
Query: 302 ILQYIDEVWAGTGPDVLPADPYERAVARFWGAYIDDKVESAWLGMLF 442
I+QY+DEVWA TG +LPADPY+RA ARFW AY D K+ AW+G+++
Sbjct: 184 IVQYVDEVWAATGTSILPADPYDRAAARFWAAYADSKLLPAWVGIMW 324
Score = 86.3 bits (182), Expect(2) = 2e-059
Identities = 33/69 (47%), Positives = 43/69 (62%)
Frame = +2 / +1
Query: 518 FRDCSRGRPFFGGDDIGFVDAVLGGYLGWFGAVGRIIGSRLIDPARTPLLAAWEDRFRAA 697
F CS G+PFF GD +G++D V+G L WF + ++ G +I+ R P LAAW RF
Sbjct: 397 FGKCSNGKPFFAGDSVGYLDLVVGSQLLWFEVLRKMFGVVVIEACRAPFLAAWVKRFWET 576
Query: 698 DVAKGVVPD 724
D AK VVPD
Sbjct: 577 DTAKAVVPD 603
Score = 66.6 bits (139), Expect(3) = 4e-021
Identities = 30/68 (44%), Positives = 35/68 (51%)
Frame = -3 / -1
Query: 435 IPSHADSTLSSMYAPQNXXXXXXXXXXXXXXGPVPAHTSSMYCRMTWDSFMARPAWRSTG 256
+P+HA +L S A Q PV A TSS YC M DS M P+W STG
Sbjct: 317 MPTHAGKSLLSA*AAQKRAAARS*GSAGRMEVPVAAQTSSTYCTMASDSQMDLPSWMSTG 138
Query: 255 TLLCTGLD 232
T +CTGLD
Sbjct: 137 TFMCTGLD 114
Score = 44.1 bits (90), Expect(3) = 4e-021
Identities = 22/66 (33%), Positives = 26/66 (39%)
Frame = -3 / -1
Query: 726 SSGTTPLXXXXXXXXXXXXXXSGVRAGSMSLLPMILPTAPNQPRYPPSTASTNPMSSPPK 547
+SGTT G SM+ P I + NQ P+T S P SP K
Sbjct: 605 TSGTTAFAVSVSQNRFTHAAKKGALQASMTTTPNIFRSTSNQSNCEPTTRSR*PTESPAK 426
Query: 546 NGLPLE 529
G PLE
Sbjct: 425 KGFPLE 408
Score = 28.6 bits (56), Expect(3) = 4e-021
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = -3 / -1
Query: 171 FRLSTMRTRITNGLVHT 121
F S MRTRITNGL T
Sbjct: 53 FICSAMRTRITNGLTRT 3
>gb|BJ544573.1|BJ544573 BJ544573 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak31o05 5', mRNA sequence
Length = 605
Score = 168 bits (361), Expect(2) = 6e-059
Identities = 65/110 (59%), Positives = 85/110 (77%)
Frame = +2 / +1
Query: 113 VLGVWTSPFVIRVRIVLNLKGLAYEYVEEDLSNKSALLLGSNPVHKSVPVLLHAGRAINE 292
+LG+ SPFVIRVR+ L++K + YEY+E+DL K LLL SNPVH VPVL+H G++I E
Sbjct: 1 LLGLTVSPFVIRVRMALHMKRVGYEYMEQDLFTKGELLLKSNPVHMKVPVLIHDGKSICE 180
Query: 293 SQVILQYIDEVWAGTGPDVLPADPYERAVARFWGAYIDDKVESAWLGMLF 442
S I+QY+DEVWA TG +LPADPY+RA ARFW AY D K+ AW+G+++
Sbjct: 181 SLAIVQYVDEVWAATGTSILPADPYDRAAARFWAAYADSKLLPAWVGIMW 330
Score = 80.3 bits (169), Expect(2) = 6e-059
Identities = 31/67 (46%), Positives = 41/67 (61%)
Frame = +2 / +1
Query: 518 FRDCSRGRPFFGGDDIGFVDAVLGGYLGWFGAVGRIIGSRLIDPARTPLLAAWEDRFRAA 697
F CS G+PFF GD +G++D V+G L WF + ++ G +I+ R P LAAW RF
Sbjct: 403 FGKCSNGKPFFAGDSVGYLDLVVGSQLLWFEVLRKMFGVVVIEACRAPFLAAWVKRFWET 582
Query: 698 DVAKGVV 718
D AK VV
Sbjct: 583 DTAKAVV 603
Score = 66.6 bits (139), Expect(3) = 9e-021
Identities = 30/68 (44%), Positives = 35/68 (51%)
Frame = -3 / -1
Query: 435 IPSHADSTLSSMYAPQNXXXXXXXXXXXXXXGPVPAHTSSMYCRMTWDSFMARPAWRSTG 256
+P+HA +L S A Q PV A TSS YC M DS M P+W STG
Sbjct: 323 MPTHAGKSLLSA*AAQKRAAARS*GSAGRMEVPVAAQTSSTYCTMASDSQMDLPSWMSTG 144
Query: 255 TLLCTGLD 232
T +CTGLD
Sbjct: 143 TFMCTGLD 120
Score = 41.8 bits (85), Expect(3) = 9e-021
Identities = 21/64 (32%), Positives = 24/64 (37%)
Frame = -3 / -1
Query: 720 GTTPLXXXXXXXXXXXXXXSGVRAGSMSLLPMILPTAPNQPRYPPSTASTNPMSSPPKNG 541
GTT G SM+ P I + NQ P+T S P SP K G
Sbjct: 605 GTTAFAVSVSQNRFTHAAKKGALQASMTTTPNIFRSTSNQSNCEPTTRSR*PTESPAKKG 426
Query: 540 LPLE 529
PLE
Sbjct: 425 FPLE 414
Score = 29.5 bits (58), Expect(3) = 9e-021
Identities = 13/19 (68%), Positives = 13/19 (68%)
Frame = -3 / -1
Query: 171 FRLSTMRTRITNGLVHTPS 115
F S MRTRITNGL PS
Sbjct: 59 FICSAMRTRITNGLTVRPS 3
>gb|BF625550.2|BF625550 HVSMEa0011E08f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0011E08f, mRNA sequence
Length = 639
Score = 187 bits (402), Expect(2) = 8e-059
Identities = 72/124 (58%), Positives = 97/124 (78%)
Frame = +2 / +1
Query: 65 QSRKLELPMAGDNDLKVLGVWTSPFVIRVRIVLNLKGLAYEYVEEDLSNKSALLLGSNPV 244
+ ++ + MA + DLK+LG+ SPFV+RVR+ L++KGL+YEY+E+DL NKS LLL SNPV
Sbjct: 13 EKQRQKTAMAAEGDLKLLGLSVSPFVVRVRMALHMKGLSYEYIEQDLFNKSELLLKSNPV 192
Query: 245 HKSVPVLLHAGRAINESQVILQYIDEVWAGTGPDVLPADPYERAVARFWGAYIDDKVESA 424
K VPVL+H G+ I +S I+QYIDEVWA GP +LP DPY+RA +RFW AY DDK+ SA
Sbjct: 193 EKKVPVLIHDGKTILDSSAIVQYIDEVWAAMGPSILPVDPYDRAASRFWAAYADDKLFSA 372
Query: 425 WLGM 436
++G+
Sbjct: 373 YVGI 384
Score = 61.1 bits (127), Expect(2) = 8e-059
Identities = 23/57 (40%), Positives = 33/57 (57%)
Frame = +2 / +1
Query: 518 FRDCSRGRPFFGGDDIGFVDAVLGGYLGWFGAVGRIIGSRLIDPARTPLLAAWEDRF 688
F S G+ FF GD +G++D +G +L W A ++ G ++ RTPLLA W RF
Sbjct: 463 FAKQSNGKAFFAGDSVGYLDLAVGCHLHWLKAQRKMFGVVFLEAGRTPLLAGWAKRF 633
>gb|CA013731.1|CA013731 HT09F05r HT Hordeum vulgare subsp. vulgare cDNA clone HT09F05
5-PRIME, mRNA sequence
Length = 615
Score = 175 bits (376), Expect(2) = 1e-058
Identities = 68/116 (58%), Positives = 88/116 (75%)
Frame = +2 / +3
Query: 95 GDNDLKVLGVWTSPFVIRVRIVLNLKGLAYEYVEEDLSNKSALLLGSNPVHKSVPVLLHA 274
G+ LK+LG+ SPFVIRVR+ L +K + YEY+E+DL K LLL SNPVH VPVL+H
Sbjct: 9 GEGGLKLLGLTVSPFVIRVRMALQMKRVGYEYMEQDLFTKGELLLKSNPVHMKVPVLIHD 188
Query: 275 GRAINESQVILQYIDEVWAGTGPDVLPADPYERAVARFWGAYIDDKVESAWLGMLF 442
G++I ES I+QY+DEVWA TG +LPADPY+RA ARFW AY D K+ AW+G+++
Sbjct: 189 GKSICESLAIVQYVDEVWAATGTSILPADPYDRAAARFWAAYADSKLLPAWVGIMW 356
Score = 72.5 bits (152), Expect(2) = 1e-058
Identities = 27/61 (44%), Positives = 37/61 (60%)
Frame = +2 / +3
Query: 518 FRDCSRGRPFFGGDDIGFVDAVLGGYLGWFGAVGRIIGSRLIDPARTPLLAAWEDRFRAA 697
F CS G+PFF GD +G++D V+G L WF + ++ G +I+ R P LAAW RF
Sbjct: 429 FGKCSNGKPFFAGDSVGYLDLVVGSQLLWFEVLRKMFGVVVIEACRAPFLAAWVKRFWET 608
Query: 698 D 700
D
Sbjct: 609 D 611
Score = 66.6 bits (139), Expect(3) = 2e-022
Identities = 30/68 (44%), Positives = 35/68 (51%)
Frame = -3 / -3
Query: 435 IPSHADSTLSSMYAPQNXXXXXXXXXXXXXXGPVPAHTSSMYCRMTWDSFMARPAWRSTG 256
+P+HA +L S A Q PV A TSS YC M DS M P+W STG
Sbjct: 349 MPTHAGKSLLSA*AAQKRAAARS*GSAGRMEVPVAAQTSSTYCTMASDSQMDLPSWMSTG 170
Query: 255 TLLCTGLD 232
T +CTGLD
Sbjct: 169 TFMCTGLD 146
Score = 39.1 bits (79), Expect(3) = 2e-022
Identities = 18/44 (40%), Positives = 21/44 (47%)
Frame = -3 / -3
Query: 660 GVRAGSMSLLPMILPTAPNQPRYPPSTASTNPMSSPPKNGLPLE 529
G SM+ P I + NQ P+T S P SP K G PLE
Sbjct: 571 GALQASMTTTPNIFRSTSNQSNCEPTTRSR*PTESPAKKGFPLE 440
Score = 38.2 bits (77), Expect(3) = 2e-022
Identities = 17/26 (65%), Positives = 18/26 (69%)
Frame = -3 / -3
Query: 171 FRLSTMRTRITNGLVHTPSTFRSLSP 94
F S MRTRITNGL PS+FR SP
Sbjct: 85 FICSAMRTRITNGLTVRPSSFRPPSP 8
>gb|BF263502.3|BF263502 HV_CEa0006O15f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0006O15f, mRNA sequence
Length = 593
Score = 214 bits (461), Expect(2) = 4e-058
Identities = 86/112 (76%), Positives = 97/112 (86%)
Frame = +2 / +3
Query: 77 LELPMAGDNDLKVLGVWTSPFVIRVRIVLNLKGLAYEYVEEDLSNKSALLLGSNPVHKSV 256
L + G+ +LK+LGVWTSPFVIRVR+VLNLK L YEYVEE+L +KSALLLGSNPVH+SV
Sbjct: 66 LPMAGGGEGELKLLGVWTSPFVIRVRVVLNLKSLPYEYVEENLGSKSALLLGSNPVHQSV 245
Query: 257 PVLLHAGRAINESQVILQYIDEVWAGTGPDVLPADPYERAVARFWGAYIDDK 412
PVLLH GR +NESQVI+QYIDEVWAG GP VLPADPYERAVARFW AY+ K
Sbjct: 246 PVLLHGGRPVNESQVIVQYIDEVWAGVGPSVLPADPYERAVARFWAAYVHHK 401
Score = 120 bits (256), Expect(2) = 9e-032
Identities = 52/102 (50%), Positives = 55/102 (53%)
Frame = -3 / -2
Query: 399 YAPQNXXXXXXXXXXXXXXGPVPAHTSSMYCRMTWDSFMARPAWRSTGTLLCTGLDPXXX 220
YA Q GP PA TSSMYC MTWDSF RP WR TGTL CTGL+P
Sbjct: 388 YAAQKRATARS*GSAGSTDGPTPAQTSSMYCTMTWDSFTGRPPWRRTGTLWCTGLEPRRS 209
Query: 219 XXXXXXXXXXXXXXRPFRLSTMRTRITNGLVHTPSTFRSLSP 94
RLST RTR+TNGLVHTPS+F S SP
Sbjct: 208 ALLLPRFSSTYSYGSDLRLSTTRTRMTNGLVHTPSSFSSPSP 83
Score = 118 bits (252), Expect(2) = 1e-028
Identities = 56/106 (52%), Positives = 64/106 (60%)
Frame = -2 / -1
Query: 412 LVVDVRAPEPRHRALVGVGRQHVRPRPRPHXXXXXXXXXXXVYGAAGVEEHRHALVHRVG 233
LVV+VR PE RH ALVGVGR+H R PRP V+GAA VEE RHALVHRVG
Sbjct: 401 LVVNVRRPEARHGALVGVGREHRRADPRPDLVDVLHDDLGLVHGAAAVEEDRHALVHRVG 222
Query: 232 PQXXXXXXXXXXXXXXXRQALQVEHDADPDHERARPHAEHLQVVVS 95
Q RQ L+VEH A PD ERARPHA+ LQ+ ++
Sbjct: 221 AQEERALAAQVLLHVLVRQRLEVEHHAHPDDERARPHAQQLQLALA 84
Score = 37.3 bits (75), Expect(2) = 9e-032
Identities = 21/51 (41%), Positives = 26/51 (50%)
Frame = -2 / -2
Query: 571 EPDVVAAEEWPPPGAVPERALQRVERLAGARHRRRPLLLVRAPEQHPQPRR 419
+PD AA E PPGA+ ERALQ + G H L + +HP RR
Sbjct: 562 KPDSFAA*ERLPPGALRERALQGFQDRQGLGHGFSLYFLRLSRTEHPCSRR 410
Score = 31.8 bits (63), Expect(2) = 4e-058
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +2 / +2
Query: 524 DCSRGRPFFGGDDIGF 571
+CSRG+PF G + IGF
Sbjct: 515 ECSRGKPFLGSEAIGF 562
Score = 28.6 bits (56), Expect(2) = 1e-028
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = -3 / -3
Query: 570 NPMSSPPKNGLPLE 529
NP++S PKNG PLE
Sbjct: 561 NPIASLPKNGFPLE 520
>gb|BJ544235.1|BJ544235 BJ544235 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak22d17 5', mRNA sequence
Length = 606
Score = 172 bits (370), Expect(2) = 7e-058
Identities = 67/115 (58%), Positives = 87/115 (75%)
Frame = +2 / +2
Query: 98 DNDLKVLGVWTSPFVIRVRIVLNLKGLAYEYVEEDLSNKSALLLGSNPVHKSVPVLLHAG 277
+ LK+LG+ SPFVIRVR+ L +K + YEY+E+DL K LLL SNPVH VPVL+H G
Sbjct: 5 EGGLKLLGLTVSPFVIRVRMALQMKRVGYEYMEQDLFTKGELLLKSNPVHMKVPVLIHDG 184
Query: 278 RAINESQVILQYIDEVWAGTGPDVLPADPYERAVARFWGAYIDDKVESAWLGMLF 442
++I ES I+QY+DEVWA TG +LPADPY+RA ARFW AY D K+ AW+G+++
Sbjct: 185 KSICESLAIVQYVDEVWAATGTSILPADPYDRAAARFWAAYADSKLLPAWVGIMW 349
Score = 72.5 bits (152), Expect(2) = 7e-058
Identities = 27/61 (44%), Positives = 37/61 (60%)
Frame = +2 / +2
Query: 518 FRDCSRGRPFFGGDDIGFVDAVLGGYLGWFGAVGRIIGSRLIDPARTPLLAAWEDRFRAA 697
F CS G+PFF GD +G++D V+G L WF + ++ G +I+ R P LAAW RF
Sbjct: 422 FGKCSNGKPFFAGDSVGYLDLVVGSQLLWFEVLRKMFGVVVIEACRAPFLAAWVKRFWET 601
Query: 698 D 700
D
Sbjct: 602 D 604
Score = 66.6 bits (139), Expect(3) = 1e-021
Identities = 30/68 (44%), Positives = 35/68 (51%)
Frame = -3 / -1
Query: 435 IPSHADSTLSSMYAPQNXXXXXXXXXXXXXXGPVPAHTSSMYCRMTWDSFMARPAWRSTG 256
+P+HA +L S A Q PV A TSS YC M DS M P+W STG
Sbjct: 342 MPTHAGKSLLSA*AAQKRAAARS*GSAGRMEVPVAAQTSSTYCTMASDSQMDLPSWMSTG 163
Query: 255 TLLCTGLD 232
T +CTGLD
Sbjct: 162 TFMCTGLD 139
Score = 39.1 bits (79), Expect(3) = 1e-021
Identities = 18/44 (40%), Positives = 21/44 (47%)
Frame = -3 / -1
Query: 660 GVRAGSMSLLPMILPTAPNQPRYPPSTASTNPMSSPPKNGLPLE 529
G SM+ P I + NQ P+T S P SP K G PLE
Sbjct: 564 GALQASMTTTPNIFRSTSNQSNCEPTTRSR*PTESPAKKGFPLE 433
Score = 35.0 bits (70), Expect(3) = 1e-021
Identities = 15/22 (68%), Positives = 16/22 (72%)
Frame = -3 / -1
Query: 171 FRLSTMRTRITNGLVHTPSTFR 106
F S MRTRITNGL PS+FR
Sbjct: 78 FICSAMRTRITNGLTVRPSSFR 13
>gb|BF264380.2|BF264380 HV_CEa0009E08f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0009E08f, mRNA sequence
Length = 848
Score = 90.9 bits (192), Expect(4) = 1e-057
Identities = 35/69 (50%), Positives = 46/69 (66%)
Frame = +2 / +3
Query: 518 FRDCSRGRPFFGGDDIGFVDAVLGGYLGWFGAVGRIIGSRLIDPARTPLLAAWEDRFRAA 697
F +CS+G+ FFGGD G+VD LGGY+ W A + G L+D ARTPLL AW +RF A
Sbjct: 456 FGECSKGKAFFGGDAPGYVDIALGGYVAWMRAFQAVGGVDLLDAARTPLLGAWAERFAAP 635
Query: 698 DVAKGVVPD 724
+ KG +P+
Sbjct: 636 ESGKGGMPE 662
Score = 84.9 bits (179), Expect(4) = 1e-057
Identities = 33/53 (62%), Positives = 42/53 (79%)
Frame = +2 / +3
Query: 182 YEYVEEDLSNKSALLLGSNPVHKSVPVLLHAGRAINESQVILQYIDEVWAGTG 340
YEY EEDL++KS LLL SNPVH VPVLLH G+ + ES +I+QY+DE + G+G
Sbjct: 117 YEYAEEDLTSKSDLLLASNPVHAKVPVLLHGGKPVCESMLIVQYLDEAFPGSG 275
Score = 57.4 bits (119), Expect(4) = 1e-057
Identities = 19/34 (55%), Positives = 27/34 (79%)
Frame = +2 / +3
Query: 329 AGTGPDVLPADPYERAVARFWGAYIDDKVESAWL 430
+G+GP +LP DP++RAVARFW AY DD ++W+
Sbjct: 270 SGSGPALLPGDPHDRAVARFWAAYADDHFFASWI 371
Score = 54.7 bits (113), Expect(4) = 9e-027
Identities = 21/36 (58%), Positives = 23/36 (63%)
Frame = -3 / -2
Query: 339 PVPAHTSSMYCRMTWDSFMARPAWRSTGTLLCTGLD 232
P P SS YC M+ DS P WRSTGTL CTGL+
Sbjct: 274 PEPGKASSRYCTMSMDSQTGLPPWRSTGTLACTGLE 167
Score = 49.6 bits (102), Expect(4) = 9e-027
Identities = 26/65 (40%), Positives = 28/65 (43%)
Frame = -3 / -2
Query: 723 SGTTPLXXXXXXXXXXXXXXSGVRAGSMSLLPMILPTAPNQPRYPPSTASTNPMSSPPKN 544
SG PL +GVRA S P A YPPS ST P +SPPK
Sbjct: 661 SGIPPLPDSGAAKRSAQAPSNGVRAASRRSTPPTAWNARIHATYPPSAMSTYPGASPPKK 482
Query: 543 GLPLE 529
LPLE
Sbjct: 481 ALPLE 467
Score = 47.3 bits (97), Expect(4) = 1e-057
Identities = 17/27 (62%), Positives = 22/27 (81%)
Frame = +2 / +3
Query: 98 DNDLKVLGVWTSPFVIRVRIVLNLKGL 178
DN+LK+LG W SPFV R R+ L+LKG+
Sbjct: 30 DNELKLLGFWASPFVHRARVALHLKGI 110
Score = 36.3 bits (73), Expect(4) = 9e-027
Identities = 18/39 (46%), Positives = 22/39 (56%)
Frame = -2 / -1
Query: 475 RRRPLLLVRAPEQHPQPRRLHLVVDVRAPEPRHRALVGV 359
RRR L+VR P + PR +VV V PE A+VGV
Sbjct: 416 RRRRPLIVRRPRERLDPRGKEVVVGVGGPEAGDGAVVGV 300
Score = 35.0 bits (70), Expect(4) = 9e-027
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = -2 / -1
Query: 172 LQVEHDADPDHERARPHAEHLQVVVS 95
L+V+ D P HERARP + L++VV+
Sbjct: 104 LEVQRDPRPVHERARPEPQQLELVVT 27
>gb|BM816911.1|BM816911 HB106C10_SK.ab1 HB Hordeum vulgare subsp. vulgare cDNA clone
HB106C10_SK.ab1 similar to Glutathione
transferase,Glycoprotein-fucosylgalactoside
alpha-galactosyltransferase,, mRNA sequence
Length = 924
Score = 158 bits (339), Expect(2) = 3e-057
Identities = 62/106 (58%), Positives = 78/106 (73%)
Frame = +2 / +2
Query: 107 LKVLGVWTSPFVIRVRIVLNLKGLAYEYVEEDLSNKSALLLGSNPVHKSVPVLLHAGRAI 286
++VLG W SPFVIRV I L LKG+ +E VEE + NKS LLL SNPVHK +PVLLH GR +
Sbjct: 101 VRVLGRWPSPFVIRVLIALGLKGVDHELVEEAMGNKSELLLASNPVHKMIPVLLHHGRPV 280
Query: 287 NESQVILQYIDEVWAGTGPDVLPADPYERAVARFWGAYIDDKVESA 424
+ES +I+QY+ E W+ P +LP+DPY RA RFW Y+DDK +A
Sbjct: 281 SESLIIVQYVHEAWSSHAPALLPSDPYARAAERFWAQYVDDKFPTA 418
Score = 84.9 bits (179), Expect(2) = 3e-057
Identities = 32/66 (48%), Positives = 42/66 (63%)
Frame = +2 / +2
Query: 524 DCSRGRPFFGGDDIGFVDAVLGGYLGWFGAVGRIIGSRLIDPARTPLLAAWEDRFRAADV 703
+C G+ +FGGD +G++D LG +LGW AV RI RL+D A+ P LAAW DRF A
Sbjct: 512 ECGGGKDYFGGDGVGYLDIALGSHLGWIXAVERIAELRLLDEAKVPKLAAWADRFCAHPA 691
Query: 704 AKGVVP 721
G +P
Sbjct: 692 VAGAMP 709
>gb|BE421080.1|BE421080 HWM005.F01 ITEC HWM Barley Leaf Library Hordeum vulgare subsp.
vulgare cDNA clone HWM005.F01, mRNA sequence
Length = 953
Score = 177 bits (380), Expect(3) = 5e-057
Identities = 71/113 (62%), Positives = 87/113 (76%)
Frame = +2 / +3
Query: 98 DNDLKVLGVWTSPFVIRVRIVLNLKGLAYEYVEEDLSNKSALLLGSNPVHKSVPVLLHAG 277
+++LK+LG W PF +RVR+ LN KGL+YEY EEDL+NKS LLL SNPV+K VPVL+H G
Sbjct: 363 EHELKLLGTWRGPFALRVRLALNFKGLSYEYQEEDLANKSDLLLESNPVNKKVPVLIHNG 542
Query: 278 RAINESQVILQYIDEVWAGTGPDVLPADPYERAVARFWGAYIDDKVESAWLGM 436
I ES IL+YIDEV+ GTGP +LP DPY+RAVARFW AYID + + W M
Sbjct: 543 VPICESLAILEYIDEVYRGTGPCLLPGDPYQRAVARFWAAYIDQNLVAPWWKM 701
Score = 59.7 bits (124), Expect(3) = 5e-057
Identities = 19/42 (45%), Positives = 29/42 (69%)
Frame = +2 / +3
Query: 521 RDCSRGRPFFGGDDIGFVDAVLGGYLGWFGAVGRIIGSRLID 646
R+CS G+PFFGGD++G++D V+GG + W + G L+D
Sbjct: 783 RECSSGKPFFGGDNVGYIDVVVGGMVAWMQGTEALWGLELLD 908
Score = 24.0 bits (46), Expect(3) = 5e-057
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +2 / +2
Query: 653 RTPLLAAWEDRF 688
+TPLL AW +RF
Sbjct: 914 QTPLLLAWMERF 949
>gb|BJ548902.1|BJ548902 BJ548902 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal39b17 3', mRNA sequence
Length = 736
Score = 147 bits (316), Expect(2) = 7e-057
Identities = 61/94 (64%), Positives = 72/94 (76%)
Frame = +2 / -1
Query: 155 IVLNLKGLAYEYVEEDLSNKSALLLGSNPVHKSVPVLLHAGRAINESQVILQYIDEVWAG 334
+ LN KGL+YEY EEDL+NKS LLL SNPV+K VPVL+H G I ES IL+YIDEV+ G
Sbjct: 736 LALNFKGLSYEYQEEDLANKSDLLLESNPVNKKVPVLIHNGVPICESLAILEYIDEVYRG 557
Query: 335 TGPDVLPADPYERAVARFWGAYIDDKVESAWLGM 436
TGP +LP DPY+RAVARFW AYID + + W M
Sbjct: 556 TGPCLLPGDPYQRAVARFWAAYIDQNLVAPWWKM 455
Score = 94.1 bits (199), Expect(2) = 7e-057
Identities = 33/68 (48%), Positives = 46/68 (67%)
Frame = +2 / -1
Query: 521 RDCSRGRPFFGGDDIGFVDAVLGGYLGWFGAVGRIIGSRLIDPARTPLLAAWEDRFRAAD 700
R+CS G+PFFGGD++G++D VLGG + W + G L+D +TPLL AW +RF +
Sbjct: 373 RECSSGKPFFGGDNVGYIDVVLGGMVAWMQGTEALCGLELLDATKTPLLLAWMERFGGME 194
Query: 701 VAKGVVPD 724
AK V+PD
Sbjct: 193 PAKAVLPD 170
>gb|BF624618.2|BF624618 HVSMEa0017E14f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0017E14f, mRNA sequence
Length = 887
Score = 193 bits (416), Expect(3) = 9e-057
Identities = 76/114 (66%), Positives = 93/114 (81%)
Frame = +2 / +2
Query: 89 MAGDNDLKVLGVWTSPFVIRVRIVLNLKGLAYEYVEEDLSNKSALLLGSNPVHKSVPVLL 268
MAG DLK+LG W SPFV RV++ L+LKGL++E VEEDL NKS LLL SNPVHK VPVL+
Sbjct: 59 MAGGEDLKLLGAWASPFVTRVKLALSLKGLSFEDVEEDLGNKSELLLSSNPVHKKVPVLV 238
Query: 269 HAGRAINESQVILQYIDEVWAGTGPDVLPADPYERAVARFWGAYIDDKVESAWL 430
H G+ + ES +ILQYIDE +AG GP +LP+DPY+RAVARFW AYIDDK+ + W+
Sbjct: 239 HNGKPVCESVIILQYIDEAFAGIGPSLLPSDPYQRAVARFWAAYIDDKLVAPWV 400
Score = 35.0 bits (70), Expect(3) = 9e-057
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +2 / +3
Query: 584 LGGYLGWFGAVGRIIGSRLIDPARTPLLAAWED 682
LG L A + G+++ DP +TP AAW D
Sbjct: 552 LGSLLSLLNATKVMSGTKIFDPCKTPFFAAWMD 650
Score = 31.3 bits (62), Expect(3) = 9e-057
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +2 / +2
Query: 521 RDCSRGRPFFGGDDIGFVDAVLG 589
R+CS G +FGG+ + VD LG
Sbjct: 488 RECS*GEGYFGGETVXLVDVSLG 556
>gb|BF621862.3|BF621862 HVSMEa0001C05f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0001C05f, mRNA sequence
Length = 595
Score = 193 bits (416), Expect(2) = 4e-056
Identities = 76/114 (66%), Positives = 93/114 (81%)
Frame = +2 / +1
Query: 89 MAGDNDLKVLGVWTSPFVIRVRIVLNLKGLAYEYVEEDLSNKSALLLGSNPVHKSVPVLL 268
MAG DLK+LG W SPFV RV++ L+LKGL++E VEEDL NKS LLL SNPVHK VPVL+
Sbjct: 64 MAGGEDLKLLGAWASPFVTRVKLALSLKGLSFEDVEEDLGNKSELLLSSNPVHKKVPVLV 243
Query: 269 HAGRAINESQVILQYIDEVWAGTGPDVLPADPYERAVARFWGAYIDDKVESAWL 430
H G+ + ES +ILQYIDE +AG GP +LP+DPY+RAVARFW AYIDDK+ + W+
Sbjct: 244 HNGKPVCESVIILQYIDEAFAGIGPSLLPSDPYQRAVARFWAAYIDDKLVAPWV 405
Score = 45.5 bits (93), Expect(2) = 4e-056
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +2 / +1
Query: 521 RDCSRGRPFFGGDDIGFVDAVLGGYLGWFGA 613
R+CS+G +FGG+ +G VD LG L W A
Sbjct: 493 RECSKGEGYFGGETVGLVDVSLGSLLSWLNA 585
>gb|BF629286.3|BF629286 HVSMEb0010K15f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0010K15f, mRNA sequence
Length = 749
Score = 193 bits (416), Expect(3) = 1e-055
Identities = 76/114 (66%), Positives = 93/114 (81%)
Frame = +2 / +1
Query: 89 MAGDNDLKVLGVWTSPFVIRVRIVLNLKGLAYEYVEEDLSNKSALLLGSNPVHKSVPVLL 268
MAG DLK+LG W SPFV RV++ L+LKGL++E VEEDL NKS LLL SNPVHK VPVL+
Sbjct: 64 MAGGEDLKLLGAWASPFVTRVKLALSLKGLSFEDVEEDLGNKSELLLSSNPVHKKVPVLV 243
Query: 269 HAGRAINESQVILQYIDEVWAGTGPDVLPADPYERAVARFWGAYIDDKVESAWL 430
H G+ + ES +ILQYIDE +AG GP +LP+DPY+RAVARFW AYIDDK+ + W+
Sbjct: 244 HNGKPVCESVIILQYIDEAFAGIGPSLLPSDPYQRAVARFWAAYIDDKLVAPWV 405
Score = 33.1 bits (66), Expect(3) = 1e-055
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +2 / +1
Query: 521 RDCSRGRPFFGGDDIGFVDAVLG 589
R+CS+G+ +FGG+ G VD LG
Sbjct: 493 RECSKGKGYFGGETGGPVDVSLG 561
Score = 29.5 bits (58), Expect(3) = 1e-055
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +2 / +1
Query: 668 AAWEDRFRAADVAKGVVP 721
AAW DRF D AKG +P
Sbjct: 643 AAWMDRFNELDAAKGGLP 696
>gb|AL504140.1|AL504140 AL504140 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW04F05V 5', mRNA sequence
Length = 700
Score = 113 bits (242), Expect(3) = 6e-055
Identities = 44/77 (57%), Positives = 61/77 (79%)
Frame = +2 / +1
Query: 101 NDLKVLGVWTSPFVIRVRIVLNLKGLAYEYVEEDLSNKSALLLGSNPVHKSVPVLLHAGR 280
+D+K+LG SPF +RVR+ L+ KG++YEY+E+DL +K LLL SNPVH VPVL+HAGR
Sbjct: 91 DDVKLLGSVMSPFAVRVRMALHAKGVSYEYLEQDLFHKGDLLLASNPVHNKVPVLIHAGR 270
Query: 281 AINESQVILQYIDEVWA 331
+ ES I++Y++EVWA
Sbjct: 271 PVCESLAIVEYVNEVWA 321
Score = 74.8 bits (157), Expect(3) = 6e-055
Identities = 29/61 (47%), Positives = 38/61 (62%)
Frame = +2 / +1
Query: 527 CSRGRPFFGGDDIGFVDAVLGGYLGWFGAVGRIIGSRLIDPARTPLLAAWEDRFRAADVA 706
CS G+ FF GD +G++D LG L WF A+ + G LID RTP LAAW +RF+ +
Sbjct: 511 CSDGKDFFAGDSVGYLDLALGCNLFWFKALREMFGVTLIDAGRTPGLAAWAERFKQTEAG 690
Query: 707 K 709
K
Sbjct: 691 K 693
Score = 65.2 bits (136), Expect(3) = 6e-055
Identities = 24/34 (70%), Positives = 28/34 (82%)
Frame = +2 / +1
Query: 338 GPDVLPADPYERAVARFWGAYIDDKVESAWLGML 439
G +LPADPY RAVARFW AY+DDK+ AWLG+L
Sbjct: 325 GASLLPADPYGRAVARFWAAYVDDKLFPAWLGIL 426
>gb|BF267688.2|BF267688 HV_CEa0018J20f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0018J20f, mRNA sequence
Length = 799
Score = 160 bits (344), Expect(2) = 1e-054
Identities = 64/81 (79%), Positives = 70/81 (86%)
Frame = +2 / +1
Query: 524 DCSRGRPFFGGDDIGFVDAVLGGYLGWFGAVGRIIGSRLIDPARTPLLAAWEDRFRAADV 703
+CS G+PFFGGD IGFVD VLGGYLGWFGA+ +IIG +LIDPARTPLLA WE+RFRAAD
Sbjct: 181 ECSGGKPFFGGDAIGFVDVVLGGYLGWFGAIDKIIGRQLIDPARTPLLARWEERFRAADA 360
Query: 704 AKGVVPDDLDKMLAFLQTLRA 766
AKGVVPDD DKML FL TL A
Sbjct: 361 AKGVVPDDADKMLDFLPTLLA 423
Score = 130 bits (278), Expect = 2e-029
Identities = 64/136 (47%), Positives = 68/136 (50%)
Frame = -3 / -3
Query: 795 TKHSHLA*FIARRVCRNASILSRSSGTTPLXXXXXXXXXXXXXXSGVRAGSMSLLPMILP 616
T H L A RV + +SILS SSGTTPL SGV AGS+S PMIL
Sbjct: 452 TVHLPLEAIQASRVGKKSSILSASSGTTPLAASAARNRSSHLASSGVLAGSISWRPMILS 273
Query: 615 TAPNQPRYPPSTASTNPMSSPPKNGLPLEQXXXXXXXXXXXXXXXXXXXXXXXXXAHLNS 436
APN PR PPST STNPM+SPPKNG P E H S
Sbjct: 272 IAPNHPR*PPSTTSTNPMASPPKNGFPPEHSASAPSRVSSAATARDTASALSSSVLHEKS 93
Query: 435 IPSHADSTLSSMYAPQ 388
IP HAD TLSS YA Q
Sbjct: 92 IPVHADPTLSSTYAAQ 45
Score = 116 bits (249), Expect(2) = 3e-040
Identities = 53/79 (67%), Positives = 59/79 (74%)
Frame = -2 / -2
Query: 583 HGVHEPDVVAAEEWPPPGAVPERALQRVERLAGARHRRRPLLLVRAPEQHPQPRRLHLVV 404
H V EPD VAAEE PPGA+ ERALQ ++R GA H RPLLL A E+HP+PRR LVV
Sbjct: 240 HDVDEPDGVAAEERLPPGALRERALQGLQRRHGAGHGLRPLLLRLAREEHPRPRRPDLVV 61
Query: 403 DVRAPEPRHRALVGVGRQH 347
DVR PE RH ALVGVGR+H
Sbjct: 60 DVRRPEARHGALVGVGREH 4
Score = 73.9 bits (155), Expect(2) = 1e-054
Identities = 28/32 (87%), Positives = 29/32 (90%)
Frame = +2 / +1
Query: 347 VLPADPYERAVARFWGAYIDDKVESAWLGMLF 442
VLPADPYERAVARFW AY+DDKV SAW GMLF
Sbjct: 4 VLPADPYERAVARFWAAYVDDKVGSAWTGMLF 99
Score = 68.9 bits (144), Expect(2) = 3e-040
Identities = 33/49 (67%), Positives = 36/49 (73%)
Frame = -2 / -2
Query: 790 TLSLGVVHSAQGLQEREHLVEVVGHDALGHVGGAEPVLPRGQQRRPGRV 644
+L+LG S QG QE EHLV VV HDALG V AEP+LP GQQRRP RV
Sbjct: 447 SLALGGDPSEQGGQEVEHLVGVVRHDALGRVRRAEPLLPPGQQRRPRRV 301
>gb|BQ471126.1|BQ471126 HV01D06T HV Hordeum vulgare subsp. vulgare cDNA clone HV01D06
5-PRIME, mRNA sequence
Length = 629
Score = 172 bits (371), Expect(2) = 5e-054
Identities = 67/111 (60%), Positives = 90/111 (81%)
Frame = +2 / +3
Query: 98 DNDLKVLGVWTSPFVIRVRIVLNLKGLAYEYVEEDLSNKSALLLGSNPVHKSVPVLLHAG 277
D++ K+LG + SPFV+R ++ L+ KGL++E VEEDL+NKS LLL SNP K VPVL+H G
Sbjct: 78 DDEPKLLGTFASPFVMRAKLALSFKGLSFEDVEEDLANKSELLLESNPAQKKVPVLIHNG 257
Query: 278 RAINESQVILQYIDEVWAGTGPDVLPADPYERAVARFWGAYIDDKVESAWL 430
+ + +SQVI+QYIDE ++G G +LPADPYERAVARFW AY+DDK+ ++WL
Sbjct: 258 KPVCDSQVIVQYIDEAFSGNGTSLLPADPYERAVARFWAAYVDDKLLASWL 410
Score = 59.3 bits (123), Expect(2) = 5e-054
Identities = 21/43 (48%), Positives = 28/43 (65%)
Frame = +2 / +1
Query: 518 FRDCSRGRPFFGGDDIGFVDAVLGGYLGWFGAVGRIIGSRLID 646
F+ CS G+PFFGGD +G++D LGG + W A + G RL D
Sbjct: 496 FKACSNGKPFFGGDRVGYLDVTLGGLVVWVHAGAALYGMRLFD 624
>gb|BJ548150.1|BJ548150 BJ548150 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal13b18 3', mRNA sequence
Length = 754
Score = 137 bits (293), Expect(2) = 9e-054
Identities = 57/87 (65%), Positives = 67/87 (77%)
Frame = +2 / -1
Query: 176 LAYEYVEEDLSNKSALLLGSNPVHKSVPVLLHAGRAINESQVILQYIDEVWAGTGPDVLP 355
L+YEY EEDL+NKS LLL SNPV+K VPVL+H G I ES IL+YIDEV+ GTGP +LP
Sbjct: 754 LSYEYQEEDLANKSDLLLESNPVNKKVPVLIHNGVPICESLAILEYIDEVYRGTGPCLLP 575
Query: 356 ADPYERAVARFWGAYIDDKVESAWLGM 436
DPY+RAVARFW AYID + + W M
Sbjct: 574 GDPYQRAVARFWAAYIDQNLVAPWWKM 494
Score = 94.1 bits (199), Expect(2) = 9e-054
Identities = 33/68 (48%), Positives = 46/68 (67%)
Frame = +2 / -1
Query: 521 RDCSRGRPFFGGDDIGFVDAVLGGYLGWFGAVGRIIGSRLIDPARTPLLAAWEDRFRAAD 700
R+CS G+PFFGGD++G++D VLGG + W + G L+D +TPLL AW +RF +
Sbjct: 412 RECSSGKPFFGGDNVGYIDVVLGGMVAWMQGTEALCGLELLDATKTPLLLAWMERFGGME 233
Query: 701 VAKGVVPD 724
AK V+PD
Sbjct: 232 PAKAVLPD 209
>gb|BF625970.2|BF625970 HVSMEa0015B01f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0015B01f, mRNA sequence
Length = 720
Score = 187 bits (402), Expect(2) = 2e-053
Identities = 75/115 (65%), Positives = 92/115 (80%)
Frame = +2 / +1
Query: 83 LPMAGDNDLKVLGVWTSPFVIRVRIVLNLKGLAYEYVEEDLSNKSALLLGSNPVHKSVPV 262
L MAG +DLK+LG W SPFV RV++ L LKGL+YE VEE+LSNKS LLL SNPVHK +PV
Sbjct: 91 LEMAGGDDLKLLGAWPSPFVTRVKLALALKGLSYEDVEENLSNKSELLLKSNPVHKKIPV 270
Query: 263 LLHAGRAINESQVILQYIDEVWAGTGPDVLPADPYERAVARFWGAYIDDKVESAW 427
L+H G + ES +I+QYID+V+A TGP +L DPYERAVARFW AY+DDK+ + W
Sbjct: 271 LIHNGSPVCESMIIVQYIDDVFASTGPSLLSEDPYERAVARFWVAYVDDKLVAPW 435
Score = 42.8 bits (87), Expect(2) = 2e-053
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = +2 / +1
Query: 521 RDCSRGRPFFGGDDIGFVDAVLGGYLGW 604
R+CS+G FFGGD + VD LGG W
Sbjct: 526 RECSKGGDFFGGDGVRLVDVALGGLFLW 609
>gb|CA011829.1|CA011829 HT03K17r HT Hordeum vulgare subsp. vulgare cDNA clone HT03K17
5-PRIME, mRNA sequence
Length = 558
Score = 161 bits (346), Expect(2) = 3e-053
Identities = 62/103 (60%), Positives = 79/103 (76%)
Frame = +2 / +3
Query: 134 PFVIRVRIVLNLKGLAYEYVEEDLSNKSALLLGSNPVHKSVPVLLHAGRAINESQVILQY 313
PFVIRVR+ L +K + YEY+E+DL K LLL SNPVH VPVL+H G++I ES I+QY
Sbjct: 12 PFVIRVRMALQMKRVGYEYMEQDLFTKGELLLKSNPVHMKVPVLIHDGKSICESLAIVQY 191
Query: 314 IDEVWAGTGPDVLPADPYERAVARFWGAYIDDKVESAWLGMLF 442
+DEVWA TG +LPADPY+RA ARFW AY D K+ AW+G+++
Sbjct: 192 VDEVWAATGTSILPADPYDRAAARFWAAYADSKLLPAWVGIMW 320
Score = 68.0 bits (142), Expect(2) = 3e-053
Identities = 24/53 (45%), Positives = 34/53 (64%)
Frame = +2 / +3
Query: 518 FRDCSRGRPFFGGDDIGFVDAVLGGYLGWFGAVGRIIGSRLIDPARTPLLAAW 676
F CS G+PFF GD +G++D V+G L WF + ++ G +I+ R P LAAW
Sbjct: 393 FGKCSNGKPFFAGDSVGYLDLVVGSQLLWFEVLRKMFGVVVIEACRAPFLAAW 551
>gb|BG299731.1|BG299731 HVSMEa0021J09f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0021J09f, mRNA sequence
Length = 569
Score = 193 bits (416), Expect(2) = 6e-053
Identities = 76/114 (66%), Positives = 93/114 (81%)
Frame = +2 / +2
Query: 89 MAGDNDLKVLGVWTSPFVIRVRIVLNLKGLAYEYVEEDLSNKSALLLGSNPVHKSVPVLL 268
MAG DLK+LG W SPFV RV++ L+LKGL++E VEEDL NKS LLL SNPVHK VPVL+
Sbjct: 53 MAGGEDLKLLGAWASPFVTRVKLALSLKGLSFEDVEEDLGNKSELLLSSNPVHKKVPVLV 232
Query: 269 HAGRAINESQVILQYIDEVWAGTGPDVLPADPYERAVARFWGAYIDDKVESAWL 430
H G+ + ES +ILQYIDE +AG GP +LP+DPY+RAVARFW AYIDDK+ + W+
Sbjct: 233 HNGKPVCESVIILQYIDEAFAGIGPSLLPSDPYQRAVARFWAAYIDDKLVAPWV 394
Score = 35.0 bits (70), Expect(2) = 6e-053
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2 / +2
Query: 521 RDCSRGRPFFGGDDIGFVDAVLGGYLGW 604
R+CS+G +FGG++ D LG L W
Sbjct: 482 RECSKGEGYFGGENRRTCDVSLGSLLSW 565
>gb|AV908971.1|AV908971 AV908971 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak11b21 5', mRNA sequence
Length = 552
Score = 172 bits (370), Expect(2) = 8e-052
Identities = 67/115 (58%), Positives = 87/115 (75%)
Frame = +2 / +2
Query: 98 DNDLKVLGVWTSPFVIRVRIVLNLKGLAYEYVEEDLSNKSALLLGSNPVHKSVPVLLHAG 277
+ LK+LG+ SPFVIRVR+ L +K + YEY+E+DL K LLL SNPVH VPVL+H G
Sbjct: 5 EGGLKLLGLTVSPFVIRVRMALQMKRVGYEYMEQDLFTKGELLLKSNPVHMKVPVLIHDG 184
Query: 278 RAINESQVILQYIDEVWAGTGPDVLPADPYERAVARFWGAYIDDKVESAWLGMLF 442
++I ES I+QY+DEVWA TG +LPADPY+RA ARFW AY D K+ AW+G+++
Sbjct: 185 KSICESLAIVQYVDEVWAATGTSILPADPYDRAAARFWAAYADSKLLPAWVGIMW 349
Score = 66.6 bits (139), Expect(3) = 4e-021
Identities = 30/68 (44%), Positives = 35/68 (51%)
Frame = -3 / -1
Query: 435 IPSHADSTLSSMYAPQNXXXXXXXXXXXXXXGPVPAHTSSMYCRMTWDSFMARPAWRSTG 256
+P+HA +L S A Q PV A TSS YC M DS M P+W STG
Sbjct: 342 MPTHAGKSLLSA*AAQKRAAARS*GSAGRMEVPVAAQTSSTYCTMASDSQMDLPSWMSTG 163
Query: 255 TLLCTGLD 232
T +CTGLD
Sbjct: 162 TFMCTGLD 139
Score = 52.4 bits (108), Expect(2) = 8e-052
Identities = 18/43 (41%), Positives = 28/43 (65%)
Frame = +2 / +2
Query: 518 FRDCSRGRPFFGGDDIGFVDAVLGGYLGWFGAVGRIIGSRLID 646
F CS G+PFF GD +G++D V+G L WF + ++ G +I+
Sbjct: 422 FGKCSNGKPFFAGDSVGYLDLVVGSQLLWFEVLRKMFGVVVIE 550
Score = 37.7 bits (76), Expect(3) = 4e-021
Identities = 17/39 (43%), Positives = 20/39 (51%)
Frame = -3 / -1
Query: 645 SMSLLPMILPTAPNQPRYPPSTASTNPMSSPPKNGLPLE 529
SM+ P I + NQ P+T S P SP K G PLE
Sbjct: 549 SMTTTPNIFRSTSNQSNCEPTTRSR*PTESPAKKGFPLE 433
Score = 35.0 bits (70), Expect(3) = 4e-021
Identities = 15/22 (68%), Positives = 16/22 (72%)
Frame = -3 / -1
Query: 171 FRLSTMRTRITNGLVHTPSTFR 106
F S MRTRITNGL PS+FR
Sbjct: 78 FICSAMRTRITNGLTVRPSSFR 13
>gb|BF621473.2|BF621473 HVSMEa0011B16f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0011B16f, mRNA sequence
Length = 848
Score = 173 bits (373), Expect(2) = 7e-051
Identities = 67/108 (62%), Positives = 87/108 (80%)
Frame = +2 / +2
Query: 101 NDLKVLGVWTSPFVIRVRIVLNLKGLAYEYVEEDLSNKSALLLGSNPVHKSVPVLLHAGR 280
+D+K+LG+W SP+V+RVR+ L++KG+ YEY EEDL +KS LLL SNPVH VPVL+H G+
Sbjct: 92 DDVKLLGMWASPYVLRVRLALSIKGIRYEYAEEDLRHKSELLLRSNPVHNKVPVLIHGGK 271
Query: 281 AINESQVILQYIDEVWAGTGPDVLPADPYERAVARFWGAYIDDKVESA 424
+ ES VILQYIDE + G GP +LPADP+ERAVARFW A+I+D + A
Sbjct: 272 PVCESLVILQYIDEAFGGAGPALLPADPHERAVARFWAAFIEDTLVKA 415
Score = 47.8 bits (98), Expect(2) = 7e-051
Identities = 18/26 (69%), Positives = 20/26 (76%)
Frame = +2 / +2
Query: 521 RDCSRGRPFFGGDDIGFVDAVLGGYL 598
RD S G+PFFGGD G+VD VLGG L
Sbjct: 509 RDVSMGKPFFGGDSAGYVDIVLGGLL 586
>gb|BE214950.1|BE214950 HV_CEb0005F03f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0005F03f, mRNA sequence
Length = 946
Score = 171 bits (369), Expect(2) = 9e-051
Identities = 67/112 (59%), Positives = 86/112 (76%)
Frame = +2 / +3
Query: 107 LKVLGVWTSPFVIRVRIVLNLKGLAYEYVEEDLSNKSALLLGSNPVHKSVPVLLHAGRAI 286
LK+LG+ SPFVIRVR+ L +K + YEY+E+DL K LLL SNPVH VPVL+H G++I
Sbjct: 24 LKLLGLTVSPFVIRVRMALQMKRVGYEYMEQDLFTKGELLLKSNPVHMKVPVLIHDGKSI 203
Query: 287 NESQVILQYIDEVWAGTGPDVLPADPYERAVARFWGAYIDDKVESAWLGMLF 442
ES I+QY+DEVWA TG +LPADPY+RA ARFW AY D K+ AW+G+++
Sbjct: 204 CESLAIVQYVDEVWAATGTSILPADPYDRAAARFWAAYADSKLLPAWVGIMW 359
Score = 49.2 bits (101), Expect(2) = 9e-051
Identities = 18/56 (32%), Positives = 30/56 (53%)
Frame = +2 / +3
Query: 518 FRDCSRGRPFFGGDDIGFVDAVLGGYLGWFGAVGRIIGSRLIDPARTPLLAAWEDR 685
F CS G+PFF GD + ++D V+ L W + +++ +I+ + AAW R
Sbjct: 432 FGKCSNGKPFFAGDSVRYLDLVVRSQLLWLXVLRKMLRVGVIEACKAXFXAAWVKR 599
>gb|BQ466487.1|BQ466487 HT02K21r HT Hordeum vulgare subsp. vulgare cDNA clone HT02K21
5-PRIME, mRNA sequence
Length = 535
Score = 193 bits (416), Expect(2) = 9e-050
Identities = 76/114 (66%), Positives = 93/114 (81%)
Frame = +2 / +1
Query: 89 MAGDNDLKVLGVWTSPFVIRVRIVLNLKGLAYEYVEEDLSNKSALLLGSNPVHKSVPVLL 268
MAG DLK+LG W SPFV RV++ L+LKGL++E VEEDL NKS LLL SNPVHK VPVL+
Sbjct: 70 MAGGEDLKLLGAWASPFVTRVKLALSLKGLSFEDVEEDLGNKSELLLSSNPVHKKVPVLV 249
Query: 269 HAGRAINESQVILQYIDEVWAGTGPDVLPADPYERAVARFWGAYIDDKVESAWL 430
H G+ + ES +ILQYIDE +AG GP +LP+DPY+RAVARFW AYIDDK+ + W+
Sbjct: 250 HNGKPVCESVIILQYIDEAFAGIGPSLLPSDPYQRAVARFWAAYIDDKLVAPWV 411
Score = 24.4 bits (47), Expect(2) = 9e-050
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = +2 / +1
Query: 521 RDCSRGRPFFGG 556
R+CS+G +FGG
Sbjct: 499 RECSKGEGYFGG 534
>gb|CA022668.1|CA022668 HZ44A05r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ44A05
5-PRIME, mRNA sequence
Length = 588
Score = 127 bits (272), Expect(3) = 2e-049
Identities = 51/85 (60%), Positives = 64/85 (75%)
Frame = +2 / +1
Query: 89 MAGDNDLKVLGVWTSPFVIRVRIVLNLKGLAYEYVEEDLSNKSALLLGSNPVHKSVPVLL 268
MAGD DLK+LG+ SPFV RVR+ L++KG+ YEY+E D+ +K LLL NPVHK VPVL+
Sbjct: 25 MAGDGDLKLLGLMVSPFVTRVRLALHMKGVGYEYIETDVLDKGELLLRYNPVHKKVPVLI 204
Query: 269 HAGRAINESQVILQYIDEVWAGTGP 343
H G + ESQVI+QY+DEVW P
Sbjct: 205 HNGVPLCESQVIVQYVDEVWPAGAP 279
Score = 64.3 bits (134), Expect(3) = 2e-049
Identities = 23/34 (67%), Positives = 27/34 (79%)
Frame = +2 / +1
Query: 338 GPDVLPADPYERAVARFWGAYIDDKVESAWLGML 439
G +LPADPY RA ARFW AY+DDK+ AWLG+L
Sbjct: 271 GAPILPADPYARATARFWAAYVDDKLFPAWLGIL 372
Score = 43.2 bits (88), Expect(3) = 2e-049
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = +2 / +1
Query: 539 RPFFGGDDIGFVDAVLGGYLGWFGAVGRIIGSRLID 646
RP FGGD IGF+D +G + W A+ R+ G +D
Sbjct: 475 RPLFGGDSIGFLDLAVGCNMFWMEALRRMFGVTFLD 582
>gb|BF622512.2|BF622512 HVSMEa0004K18f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0004K18f, mRNA sequence
Length = 487
Score = 193 bits (417), Expect = 1e-048
Identities = 76/121 (62%), Positives = 97/121 (80%)
Frame = +2 / +2
Query: 68 SRKLELPMAGDNDLKVLGVWTSPFVIRVRIVLNLKGLAYEYVEEDLSNKSALLLGSNPVH 247
++ ++ MAG DLK+LG W SPFV RV++ L+LKGL++E VEEDL NKS LLL SNPVH
Sbjct: 38 TQMMQETMAGGEDLKLLGAWASPFVTRVKLALSLKGLSFEDVEEDLGNKSELLLSSNPVH 217
Query: 248 KSVPVLLHAGRAINESQVILQYIDEVWAGTGPDVLPADPYERAVARFWGAYIDDKVESAW 427
K VPVL+H G+ + ES +ILQYIDE +AG GP +LP+DPY+RAVARFW AYIDDK+ + W
Sbjct: 218 KKVPVLVHNGKPVCESVIILQYIDEAFAGIGPSLLPSDPYQRAVARFWAAYIDDKLVAPW 397
Query: 428 L 430
+
Sbjct: 398 V 400
>gb|BF624202.2|BF624202 HVSMEa0012J22f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0012J22f, mRNA sequence
Length = 487
Score = 193 bits (416), Expect = 1e-048
Identities = 76/114 (66%), Positives = 93/114 (81%)
Frame = +2 / +1
Query: 89 MAGDNDLKVLGVWTSPFVIRVRIVLNLKGLAYEYVEEDLSNKSALLLGSNPVHKSVPVLL 268
MAG DLK+LG W SPFV RV++ L+LKGL++E VEEDL NKS LLL SNPVHK VPVL+
Sbjct: 67 MAGGEDLKLLGAWASPFVTRVKLALSLKGLSFEDVEEDLGNKSELLLSSNPVHKKVPVLV 246
Query: 269 HAGRAINESQVILQYIDEVWAGTGPDVLPADPYERAVARFWGAYIDDKVESAWL 430
H G+ + ES +ILQYIDE +AG GP +LP+DPY+RAVARFW AYIDDK+ + W+
Sbjct: 247 HNGKPVCESVIILQYIDEAFAGIGPSLLPSDPYQRAVARFWAAYIDDKLVAPWV 408
>gb|BF626678.2|BF626678 HVSMEb0001A21f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0001A21f, mRNA sequence
Length = 851
Score = 177 bits (380), Expect(2) = 3e-048
Identities = 71/113 (62%), Positives = 87/113 (76%)
Frame = +2 / +1
Query: 98 DNDLKVLGVWTSPFVIRVRIVLNLKGLAYEYVEEDLSNKSALLLGSNPVHKSVPVLLHAG 277
+++LK+LG W PF +RVR+ LN KGL+YEY EEDL+NKS LLL SNPV+K VPVL+H G
Sbjct: 280 EHELKLLGTWRGPFALRVRLALNFKGLSYEYQEEDLANKSDLLLESNPVNKKVPVLIHNG 459
Query: 278 RAINESQVILQYIDEVWAGTGPDVLPADPYERAVARFWGAYIDDKVESAWLGM 436
I ES IL+YIDEV+ GTGP +LP DPY+RAVARFW AYID + + W M
Sbjct: 460 VPICESLAILEYIDEVYRGTGPCLLPGDPYQRAVARFWAAYIDQNLVAPWWRM 618
Score = 35.9 bits (72), Expect(2) = 3e-048
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +2 / +2
Query: 521 RDCSRGRPFFGGDDIGFVDAVLGGY 595
R+ S G PFFGGD G++D +G Y
Sbjct: 701 RNASVGNPFFGGDKRGYIDLRVGWY 775
>gb|CA012539.1|CA012539 HT05L11r HT Hordeum vulgare subsp. vulgare cDNA clone HT05L11
5-PRIME, mRNA sequence
Length = 602
Score = 161 bits (346), Expect(2) = 3e-048
Identities = 63/106 (59%), Positives = 79/106 (74%)
Frame = +2 / +3
Query: 107 LKVLGVWTSPFVIRVRIVLNLKGLAYEYVEEDLSNKSALLLGSNPVHKSVPVLLHAGRAI 286
++VLG W SPFVIRV I L LKG+ +E VEE + NKS LLL SNPVHK +PVLLH GR +
Sbjct: 78 VRVLGRWRSPFVIRVLIALGLKGVDHELVEEAMGNKSELLLASNPVHKMIPVLLHHGRPV 257
Query: 287 NESQVILQYIDEVWAGTGPDVLPADPYERAVARFWGAYIDDKVESA 424
+ES +I+QY+DE W+ P +LP+DPY RA RFW Y+DDK +A
Sbjct: 258 SESLIIVQYVDEAWSSHAPALLPSDPYARAAERFWAQYVDDKFPTA 395
Score = 51.5 bits (106), Expect(2) = 3e-048
Identities = 17/34 (50%), Positives = 24/34 (70%)
Frame = +2 / +3
Query: 524 DCSRGRPFFGGDDIGFVDAVLGGYLGWFGAVGRI 625
+C G+ +FGGD +G++D LG +LGW AV RI
Sbjct: 489 ECGGGKDYFGGDGVGYLDIALGSHLGWIRAVERI 590
>gb|BU989585.1|BU989585 HF22C07r HF Hordeum vulgare subsp. vulgare cDNA clone HF22C07
5-PRIME, mRNA sequence
Length = 599
Score = 179 bits (386), Expect(2) = 5e-048
Identities = 73/113 (64%), Positives = 88/113 (77%)
Frame = +2 / +3
Query: 89 MAGDNDLKVLGVWTSPFVIRVRIVLNLKGLAYEYVEEDLSNKSALLLGSNPVHKSVPVLL 268
MAG+++LK+LG W S + RV+I L+LKGL+YEYVE+DL NKS LLL SNPVHK VPVL+
Sbjct: 135 MAGEDELKLLGTWASAWAARVKIALHLKGLSYEYVEQDLDNKSDLLLMSNPVHKKVPVLI 314
Query: 269 HAGRAINESQVILQYIDEVWAGTGPDVLPADPYERAVARFWGAYIDDKVESAW 427
H G+ I ES VIL+YIDE + TGP +LP DPYERAVARFW YID K+ W
Sbjct: 315 HNGKPICESVVILEYIDEAYGTTGPSLLPTDPYERAVARFWVDYIDQKLVIPW 473
Score = 32.2 bits (64), Expect(2) = 5e-048
Identities = 9/13 (69%), Positives = 13/13 (100%)
Frame = +2 / +3
Query: 521 RDCSRGRPFFGGD 559
++CS+G+PFFGGD
Sbjct: 561 KECSKGKPFFGGD 599
>gb|BF622191.2|BF622191 HVSMEa0001P16f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0001P16f, mRNA sequence
Length = 694
Score = 191 bits (412), Expect = 5e-048
Identities = 77/109 (70%), Positives = 90/109 (82%)
Frame = +2 / +2
Query: 89 MAGDNDLKVLGVWTSPFVIRVRIVLNLKGLAYEYVEEDLSNKSALLLGSNPVHKSVPVLL 268
MAG DLK+LG W SPFV RV++ L+LKGL++E VEEDL NKS LLL SNPVHK VPVL+
Sbjct: 59 MAGGEDLKLLGAWASPFVTRVKLALSLKGLSFEDVEEDLGNKSELLLSSNPVHKKVPVLV 238
Query: 269 HAGRAINESQVILQYIDEVWAGTGPDVLPADPYERAVARFWGAYIDDKV 415
H G+ + ES +ILQYIDE +AG GP VLP+DPY+RAVARFW AYIDDKV
Sbjct: 239 HNGKPVCESVIILQYIDEAFAGIGPSVLPSDPYQRAVARFWAAYIDDKV 385
>gb|BE214207.2|BE214207 HV_CEb0002K18f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0002K18f, mRNA sequence
Length = 717
Score = 126 bits (269), Expect(3) = 7e-048
Identities = 50/85 (58%), Positives = 64/85 (75%)
Frame = +2 / +3
Query: 89 MAGDNDLKVLGVWTSPFVIRVRIVLNLKGLAYEYVEEDLSNKSALLLGSNPVHKSVPVLL 268
+AGD DLK+LG+ SPFV RVR+ L++KG+ YEY+E D+ +K LLL NPVHK VPVL+
Sbjct: 6 LAGDGDLKLLGLMVSPFVTRVRLALHMKGVGYEYIETDVLDKGELLLRYNPVHKKVPVLI 185
Query: 269 HAGRAINESQVILQYIDEVWAGTGP 343
H G + ESQVI+QY+DEVW P
Sbjct: 186 HNGVPLCESQVIVQYVDEVWPAGAP 260
Score = 61.6 bits (128), Expect(3) = 7e-048
Identities = 22/34 (64%), Positives = 26/34 (76%)
Frame = +2 / +3
Query: 338 GPDVLPADPYERAVARFWGAYIDDKVESAWLGML 439
G +LPADPY RA AR W AY+DDK+ AWLG+L
Sbjct: 252 GAPILPADPYARATARLWAAYVDDKLFPAWLGIL 353
Score = 42.3 bits (86), Expect(3) = 7e-048
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = +2 / +3
Query: 539 RPFFGGDDIGFVDAVLGGYLGWFGAVGRIIG 631
RP FGGD IGF+D GG W A+ R+ G
Sbjct: 456 RPLFGGDSIGFLDLAGGGNKSWMEALRRMFG 548
>gb|BQ465287.1|BQ465287 HU03D01r HU Hordeum vulgare subsp. vulgare cDNA clone HU03D01
5-PRIME, mRNA sequence
Length = 607
Score = 161 bits (346), Expect(2) = 3e-047
Identities = 63/106 (59%), Positives = 79/106 (74%)
Frame = +2 / +2
Query: 107 LKVLGVWTSPFVIRVRIVLNLKGLAYEYVEEDLSNKSALLLGSNPVHKSVPVLLHAGRAI 286
++VLG W SPFVIRV I L LKG+ +E VEE + NKS LLL SNPVHK +PVLLH GR +
Sbjct: 92 VRVLGRWRSPFVIRVLIALGLKGVDHELVEEAMGNKSELLLASNPVHKMIPVLLHHGRPV 271
Query: 287 NESQVILQYIDEVWAGTGPDVLPADPYERAVARFWGAYIDDKVESA 424
+ES +I+QY+DE W+ P +LP+DPY RA RFW Y+DDK +A
Sbjct: 272 SESLIIVQYVDEAWSSHAPALLPSDPYARAAERFWAQYVDDKFPTA 409
Score = 48.3 bits (99), Expect(2) = 3e-047
Identities = 16/34 (47%), Positives = 23/34 (67%)
Frame = +2 / +2
Query: 524 DCSRGRPFFGGDDIGFVDAVLGGYLGWFGAVGRI 625
+C G+ +FGGD +G++D L +LGW AV RI
Sbjct: 503 ECGGGKDYFGGDGVGYLDIALXSHLGWIRAVERI 604
>gb|BQ467879.1|BQ467879 HR01D11r HR Hordeum vulgare subsp. vulgare cDNA clone HR01D11
5-PRIME, mRNA sequence
Length = 500
Score = 189 bits (407), Expect = 3e-047
Identities = 73/111 (65%), Positives = 92/111 (82%)
Frame = +2 / +3
Query: 95 GDNDLKVLGVWTSPFVIRVRIVLNLKGLAYEYVEEDLSNKSALLLGSNPVHKSVPVLLHA 274
G +++K+LG+W SPFV+R ++ L LKG+ YEYVEE+L+NKS L L SNPVHK+VPVL+H
Sbjct: 81 GGDEVKLLGMWASPFVVRAQLALRLKGVNYEYVEEELANKSDLFLRSNPVHKTVPVLIHD 260
Query: 275 GRAINESQVILQYIDEVWAGTGPDVLPADPYERAVARFWGAYIDDKVESAW 427
G+ I ESQVILQYIDE +AG GP +LPADPYERAVARFW AY++DK+ W
Sbjct: 261 GKPICESQVILQYIDEAFAGVGPSLLPADPYERAVARFWAAYVEDKLLPPW 413
Score = 100 bits (213), Expect(2) = 2e-022
Identities = 47/113 (41%), Positives = 53/113 (46%)
Frame = -3 / -2
Query: 426 HADSTLSSMYAPQNXXXXXXXXXXXXXXGPVPAHTSSMYCRMTWDSFMARPAWRSTGTLL 247
H S+LSS A Q GP PA SSMYCRMTWDS M P+W STGT+L
Sbjct: 412 HGGSSLSST*AAQKRATARS*GSAGRRDGPTPAKASSMYCRMTWDSQMGLPSWMSTGTVL 233
Query: 246 CTGLDPXXXXXXXXXXXXXXXXXRPFRLSTMRTRITNGLVHTPSTFRSLSPAI 88
CTGL+ P R S TNGL H PS+F S P +
Sbjct: 232 CTGLERRKRSLLLASSSSTYS*FTPLRRSASCALTTNGLAHMPSSFTSSPPLL 74
Score = 25.8 bits (50), Expect(2) = 2e-022
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = -2 / -1
Query: 511 LQRVERLAGARHRRRPLLLVRAPEQHPQPRR 419
LQRV R RPLL+ R PE P R+
Sbjct: 494 LQRVHRRHRLPRPLRPLLVGRHPEHLPPRRQ 402
>gb|BG299389.1|BG299389 HVSMEa0019L19f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0019L19f, mRNA sequence
Length = 624
Score = 128 bits (274), Expect(3) = 4e-047
Identities = 51/85 (60%), Positives = 65/85 (76%)
Frame = +2 / +2
Query: 89 MAGDNDLKVLGVWTSPFVIRVRIVLNLKGLAYEYVEEDLSNKSALLLGSNPVHKSVPVLL 268
MAGD DLK+LG+ SPFV RVR+ L++KG+ YEY+E D+ +K LLL NPVHK VPVL+
Sbjct: 53 MAGDGDLKLLGLMVSPFVTRVRLALHMKGVGYEYIETDVLDKGELLLRYNPVHKKVPVLI 232
Query: 269 HAGRAINESQVILQYIDEVWAGTGP 343
H G + ESQVI+QY+DEVW+ P
Sbjct: 233 HNGVPLCESQVIVQYVDEVWSAGAP 307
Score = 64.3 bits (134), Expect(3) = 4e-047
Identities = 23/34 (67%), Positives = 27/34 (79%)
Frame = +2 / +2
Query: 338 GPDVLPADPYERAVARFWGAYIDDKVESAWLGML 439
G +LPADPY RA ARFW AY+DDK+ AWLG+L
Sbjct: 299 GAPILPADPYARATARFWAAYVDDKLFPAWLGIL 400
Score = 34.5 bits (69), Expect(3) = 4e-047
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +2 / +2
Query: 539 RPFFGGDDIGFVDAVLGGYLGWFGAVGRIIG 631
RPF GGD IGF+D +G + A+G + G
Sbjct: 503 RPFVGGDSIGFLDLAVGCNMF*MEALGXMFG 595
>gb|BF625840.2|BF625840 HVSMEa0013N01f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0013N01f, mRNA sequence
Length = 483
Score = 187 bits (403), Expect = 9e-047
Identities = 78/106 (73%), Positives = 89/106 (83%)
Frame = +2 / +1
Query: 77 LELPMAGDNDLKVLGVWTSPFVIRVRIVLNLKGLAYEYVEEDLSNKSALLLGSNPVHKSV 256
L + G+ +LK+LGVWTSPFVIRVR+VLNLK L YEYVEE+L +KSALLLGSNPVH+SV
Sbjct: 67 LPMAGGGEGELKLLGVWTSPFVIRVRVVLNLKSLPYEYVEENLGSKSALLLGSNPVHQSV 246
Query: 257 PVLLHAGRAINESQVILQYIDEVWAGTGPDVLPADPYERAVARFWG 394
PVLLH GR +NESQVI+QYIDEVWAG GP LPADPY+RA F G
Sbjct: 247 PVLLHGGRPVNESQVIVQYIDEVWAGVGP*ELPADPYKRAGVPF*G 384
Score = 117 bits (251), Expect = 9e-026
Identities = 48/82 (58%), Positives = 51/82 (62%)
Frame = -3 / -2
Query: 339 PVPAHTSSMYCRMTWDSFMARPAWRSTGTLLCTGLDPXXXXXXXXXXXXXXXXXRPFRLS 160
P PA TSSMYC MTWDSF RP WR TGTL CTGL+P RLS
Sbjct: 329 PTPAQTSSMYCTMTWDSFTGRPPWRRTGTLWCTGLEPRRSALLLPRFSSTYSYGSDLRLS 150
Query: 159 TMRTRITNGLVHTPSTFRSLSP 94
T RTR+TNGLVHTPS+F S SP
Sbjct: 149 TTRTRMTNGLVHTPSSFSSPSP 84
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 408,023,785
Number of Sequences: 312970
Number of extensions: 6713909
Number of successful extensions: 128252
Number of sequences better than 1.0e-020: 456
length of database: 58,378,179
effective HSP length: 53
effective length of database: 41,790,769
effective search space used: 13331255311
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)